Query psy5931
Match_columns 173
No_of_seqs 111 out of 119
Neff 5.2
Searched_HMMs 29240
Date Fri Aug 16 22:11:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5931.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5931hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 98.6 1.4E-07 4.8E-12 68.5 8.8 111 38-170 14-125 (126)
2 4ga2_A E3 SUMO-protein ligase 98.6 3.1E-07 1.1E-11 68.1 9.8 141 4-170 2-144 (150)
3 3upv_A Heat shock protein STI1 98.3 2.6E-06 9E-11 59.7 7.7 109 39-169 6-121 (126)
4 3urz_A Uncharacterized protein 98.3 2.1E-05 7.3E-10 60.6 12.8 154 3-169 8-199 (208)
5 3vtx_A MAMA; tetratricopeptide 98.2 4.5E-06 1.6E-10 61.6 7.5 74 77-164 104-177 (184)
6 3rkv_A Putative peptidylprolyl 98.2 1.1E-05 3.8E-10 59.1 9.4 122 35-169 9-141 (162)
7 3gyz_A Chaperone protein IPGC; 98.2 7.8E-06 2.7E-10 62.0 8.5 101 39-161 38-138 (151)
8 3vtx_A MAMA; tetratricopeptide 98.1 2.5E-05 8.4E-10 57.6 10.2 142 3-171 9-152 (184)
9 2pl2_A Hypothetical conserved 98.1 2.3E-05 7.8E-10 60.8 10.4 141 3-169 9-160 (217)
10 3sz7_A HSC70 cochaperone (SGT) 98.1 1.1E-05 3.8E-10 59.2 7.9 102 37-160 11-112 (164)
11 4gcn_A Protein STI-1; structur 98.1 1.3E-05 4.5E-10 57.7 7.5 114 33-168 4-124 (127)
12 4i17_A Hypothetical protein; T 98.0 5.5E-05 1.9E-09 57.7 10.9 130 2-157 10-147 (228)
13 4gyw_A UDP-N-acetylglucosamine 98.0 4.9E-05 1.7E-09 71.4 12.4 142 2-170 12-155 (723)
14 2dba_A Smooth muscle cell asso 98.0 6.1E-05 2.1E-09 52.5 9.8 114 37-169 28-142 (148)
15 4ga2_A E3 SUMO-protein ligase 98.0 2.3E-05 7.7E-10 57.9 7.9 100 55-170 9-109 (150)
16 2h6f_A Protein farnesyltransfe 98.0 6.3E-05 2.2E-09 65.1 11.8 114 2-128 100-214 (382)
17 3u4t_A TPR repeat-containing p 98.0 0.00013 4.3E-09 56.2 12.2 113 3-126 7-120 (272)
18 2lni_A Stress-induced-phosphop 97.9 4E-05 1.4E-09 52.4 8.0 116 33-170 12-128 (133)
19 4gco_A Protein STI-1; structur 97.9 2.7E-05 9.2E-10 56.2 7.2 86 71-170 5-91 (126)
20 4i17_A Hypothetical protein; T 97.9 0.00075 2.6E-08 51.3 15.7 157 4-170 47-224 (228)
21 3qky_A Outer membrane assembly 97.9 0.00056 1.9E-08 53.4 14.9 161 3-169 56-241 (261)
22 1elw_A TPR1-domain of HOP; HOP 97.9 0.00017 5.8E-09 47.8 10.2 109 2-124 7-116 (118)
23 2dba_A Smooth muscle cell asso 97.9 0.00022 7.4E-09 49.7 11.0 113 2-124 31-143 (148)
24 2lni_A Stress-induced-phosphop 97.9 0.00028 9.5E-09 48.1 11.3 113 2-127 19-131 (133)
25 3uq3_A Heat shock protein STI1 97.9 0.00021 7.2E-09 53.9 11.4 131 3-157 83-237 (258)
26 1elr_A TPR2A-domain of HOP; HO 97.9 0.00011 3.6E-09 49.8 8.8 109 40-170 7-122 (131)
27 3as5_A MAMA; tetratricopeptide 97.9 0.00044 1.5E-08 49.1 12.4 128 3-156 12-139 (186)
28 3gyz_A Chaperone protein IPGC; 97.8 4.6E-05 1.6E-09 57.7 7.5 83 76-171 32-115 (151)
29 3u4t_A TPR repeat-containing p 97.8 0.00012 4.2E-09 56.3 10.0 142 2-169 40-185 (272)
30 3urz_A Uncharacterized protein 97.8 8.2E-05 2.8E-09 57.3 8.9 109 39-169 6-131 (208)
31 1hxi_A PEX5, peroxisome target 97.8 5.4E-05 1.8E-09 54.1 7.3 96 40-157 20-115 (121)
32 1a17_A Serine/threonine protei 97.8 8.4E-05 2.9E-09 52.8 8.2 105 32-158 8-112 (166)
33 2vgx_A Chaperone SYCD; alterna 97.8 8.1E-05 2.8E-09 55.0 8.4 100 37-158 21-120 (148)
34 2hr2_A Hypothetical protein; a 97.8 3.7E-05 1.3E-09 60.5 6.8 70 76-158 53-133 (159)
35 3q49_B STIP1 homology and U bo 97.8 5.4E-05 1.8E-09 52.8 6.9 96 40-157 12-107 (137)
36 1elw_A TPR1-domain of HOP; HOP 97.8 0.00014 4.8E-09 48.2 8.5 109 39-169 6-115 (118)
37 2xcb_A PCRH, regulatory protei 97.8 9.9E-05 3.4E-09 53.2 8.2 99 37-157 18-116 (142)
38 3ieg_A DNAJ homolog subfamily 97.8 0.00039 1.3E-08 54.7 12.0 149 3-170 192-350 (359)
39 2q7f_A YRRB protein; TPR, prot 97.8 0.00032 1.1E-08 52.7 10.9 111 3-127 61-172 (243)
40 2pl2_A Hypothetical conserved 97.8 0.0003 1E-08 54.4 11.0 145 3-169 43-194 (217)
41 2xev_A YBGF; tetratricopeptide 97.8 0.00027 9.1E-09 48.7 9.6 100 41-159 6-108 (129)
42 2fo7_A Synthetic consensus TPR 97.7 0.00021 7.1E-09 47.9 8.7 130 2-157 4-133 (136)
43 2fbn_A 70 kDa peptidylprolyl i 97.7 0.00014 4.8E-09 54.8 8.5 116 36-170 37-166 (198)
44 1xnf_A Lipoprotein NLPI; TPR, 97.7 0.0001 3.4E-09 56.6 7.7 108 11-127 17-124 (275)
45 4abn_A Tetratricopeptide repea 97.7 0.00013 4.3E-09 63.8 9.2 123 33-171 43-181 (474)
46 2vyi_A SGTA protein; chaperone 97.7 0.00033 1.1E-08 47.1 9.4 112 37-170 12-124 (131)
47 2q7f_A YRRB protein; TPR, prot 97.7 0.00068 2.3E-08 50.9 11.7 130 3-158 95-224 (243)
48 3hym_B Cell division cycle pro 97.7 0.00061 2.1E-08 53.2 11.7 128 3-156 94-222 (330)
49 3uq3_A Heat shock protein STI1 97.7 0.00018 6.2E-09 54.2 8.2 75 44-127 112-186 (258)
50 3as5_A MAMA; tetratricopeptide 97.7 0.00033 1.1E-08 49.8 9.1 128 3-157 46-174 (186)
51 2l6j_A TPR repeat-containing p 97.7 0.00011 3.7E-09 49.2 6.2 69 79-160 3-71 (111)
52 3ieg_A DNAJ homolog subfamily 97.6 0.00068 2.3E-08 53.3 11.6 133 3-157 75-218 (359)
53 2vyi_A SGTA protein; chaperone 97.6 0.00089 3E-08 44.9 10.6 111 3-127 16-127 (131)
54 2r5s_A Uncharacterized protein 97.6 0.001 3.5E-08 49.3 11.9 126 2-154 43-171 (176)
55 3qky_A Outer membrane assembly 97.6 0.00068 2.3E-08 52.9 11.4 135 3-159 19-180 (261)
56 1hh8_A P67PHOX, NCF-2, neutrop 97.6 0.00089 3E-08 49.9 11.5 127 3-158 10-152 (213)
57 3upv_A Heat shock protein STI1 97.6 0.00057 2E-08 47.4 9.8 111 2-126 7-124 (126)
58 2y4t_A DNAJ homolog subfamily 97.6 0.00072 2.4E-08 55.8 11.9 148 2-168 214-371 (450)
59 2ho1_A Type 4 fimbrial biogene 97.6 0.001 3.5E-08 50.6 11.9 113 3-127 75-188 (252)
60 3rkv_A Putative peptidylprolyl 97.6 0.00087 3E-08 48.8 11.0 116 3-127 15-145 (162)
61 4a1s_A PINS, partner of inscut 97.6 0.001 3.5E-08 54.3 12.5 151 2-156 51-212 (411)
62 3hym_B Cell division cycle pro 97.6 0.001 3.5E-08 51.9 12.0 145 3-170 163-314 (330)
63 2vq2_A PILW, putative fimbrial 97.6 0.00084 2.9E-08 49.4 10.9 108 4-125 13-124 (225)
64 4abn_A Tetratricopeptide repea 97.6 0.00033 1.1E-08 61.2 9.9 150 3-171 106-269 (474)
65 1na3_A Designed protein CTPR2; 97.6 0.00025 8.6E-09 45.8 7.0 82 76-170 5-87 (91)
66 1a17_A Serine/threonine protei 97.6 0.00099 3.4E-08 47.1 10.8 130 2-156 16-146 (166)
67 4eqf_A PEX5-related protein; a 97.6 0.00015 5.3E-09 58.6 7.2 87 57-157 191-277 (365)
68 2fbn_A 70 kDa peptidylprolyl i 97.6 0.0015 5E-08 49.1 11.9 118 2-128 41-170 (198)
69 4eqf_A PEX5-related protein; a 97.5 0.00033 1.1E-08 56.7 8.7 130 4-158 182-312 (365)
70 1ihg_A Cyclophilin 40; ppiase 97.5 0.00049 1.7E-08 58.8 10.1 122 37-171 223-352 (370)
71 2vq2_A PILW, putative fimbrial 97.5 0.0017 5.9E-08 47.7 11.6 114 3-127 46-160 (225)
72 2y4t_A DNAJ homolog subfamily 97.5 0.00089 3E-08 55.3 10.9 133 3-158 98-242 (450)
73 2kck_A TPR repeat; tetratricop 97.5 0.00034 1.2E-08 46.0 6.8 95 42-158 11-108 (112)
74 2h6f_A Protein farnesyltransfe 97.5 0.00077 2.6E-08 58.2 10.8 147 3-169 135-283 (382)
75 3sz7_A HSC70 cochaperone (SGT) 97.5 0.00035 1.2E-08 51.1 7.2 82 76-170 7-89 (164)
76 2xev_A YBGF; tetratricopeptide 97.5 0.0033 1.1E-07 43.0 11.9 111 2-121 5-117 (129)
77 3ro2_A PINS homolog, G-protein 97.5 0.0014 4.8E-08 50.5 11.0 150 3-156 9-172 (338)
78 2ho1_A Type 4 fimbrial biogene 97.4 0.0036 1.2E-07 47.5 13.0 132 3-159 109-241 (252)
79 1fch_A Peroxisomal targeting s 97.4 0.0012 4E-08 52.8 10.2 66 79-157 250-315 (368)
80 1na0_A Designed protein CTPR3; 97.4 0.0022 7.4E-08 42.6 10.0 109 3-125 13-122 (125)
81 2xpi_A Anaphase-promoting comp 97.4 0.0013 4.5E-08 56.5 11.1 144 4-171 446-595 (597)
82 3sf4_A G-protein-signaling mod 97.4 0.0033 1.1E-07 50.5 12.7 151 2-156 12-176 (406)
83 4gyw_A UDP-N-acetylglucosamine 97.4 0.001 3.5E-08 62.5 11.1 117 2-131 46-162 (723)
84 1na0_A Designed protein CTPR3; 97.4 0.0012 4.2E-08 43.8 8.6 108 41-170 13-121 (125)
85 1hh8_A P67PHOX, NCF-2, neutrop 97.4 0.0016 5.5E-08 48.5 10.2 94 39-157 8-101 (213)
86 1na3_A Designed protein CTPR2; 97.4 0.0008 2.7E-08 43.4 7.4 77 41-126 13-89 (91)
87 3k9i_A BH0479 protein; putativ 97.4 0.0005 1.7E-08 47.8 6.7 71 76-159 23-93 (117)
88 1p5q_A FKBP52, FK506-binding p 97.4 0.0013 4.5E-08 54.8 10.4 80 78-170 194-274 (336)
89 1w3b_A UDP-N-acetylglucosamine 97.4 0.0013 4.3E-08 53.8 10.0 47 79-125 270-316 (388)
90 2l6j_A TPR repeat-containing p 97.4 0.0013 4.4E-08 43.8 8.4 81 39-128 6-92 (111)
91 2xcb_A PCRH, regulatory protei 97.3 0.00073 2.5E-08 48.5 7.4 82 76-170 14-96 (142)
92 2vsy_A XCC0866; transferase, g 97.3 0.0034 1.2E-07 55.1 13.1 133 2-157 26-158 (568)
93 1w3b_A UDP-N-acetylglucosamine 97.3 0.002 6.9E-08 52.6 10.8 128 3-157 241-369 (388)
94 4g1t_A Interferon-induced prot 97.3 0.0016 5.4E-08 54.4 10.3 120 3-127 55-185 (472)
95 2vgx_A Chaperone SYCD; alterna 97.3 0.00075 2.6E-08 49.6 7.5 82 76-170 17-99 (148)
96 2e2e_A Formate-dependent nitri 97.3 0.0011 3.7E-08 48.6 8.2 104 41-166 48-154 (177)
97 1xnf_A Lipoprotein NLPI; TPR, 97.3 0.0013 4.6E-08 50.2 8.8 88 57-157 19-107 (275)
98 2yhc_A BAMD, UPF0169 lipoprote 97.3 0.0027 9.4E-08 48.9 10.7 136 3-160 8-180 (225)
99 3nf1_A KLC 1, kinesin light ch 97.3 0.0012 4E-08 51.1 8.5 133 2-156 30-182 (311)
100 2kc7_A BFR218_protein; tetratr 97.3 0.00086 2.9E-08 44.6 6.8 69 41-118 4-73 (99)
101 3edt_B KLC 2, kinesin light ch 97.3 0.0025 8.7E-08 48.2 10.0 134 2-156 46-198 (283)
102 3q49_B STIP1 homology and U bo 97.2 0.00076 2.6E-08 46.8 6.4 82 76-170 5-87 (137)
103 2kat_A Uncharacterized protein 97.2 0.0007 2.4E-08 46.5 6.0 67 78-157 17-83 (115)
104 1kt0_A FKBP51, 51 kDa FK506-bi 97.2 0.0026 9E-08 55.4 11.0 118 37-169 268-394 (457)
105 3u3w_A Transcriptional activat 97.2 0.0051 1.7E-07 49.2 11.9 153 5-172 121-282 (293)
106 1p5q_A FKBP52, FK506-binding p 97.2 0.0016 5.5E-08 54.3 9.0 116 3-127 151-277 (336)
107 4gcn_A Protein STI-1; structur 97.2 0.00065 2.2E-08 48.6 5.5 68 77-157 5-72 (127)
108 2c2l_A CHIP, carboxy terminus 97.1 0.001 3.6E-08 53.8 7.2 97 39-157 6-102 (281)
109 1hxi_A PEX5, peroxisome target 97.1 0.001 3.5E-08 47.3 6.3 76 81-169 18-94 (121)
110 1ihg_A Cyclophilin 40; ppiase 97.1 0.0056 1.9E-07 52.2 11.9 117 2-127 226-354 (370)
111 3edt_B KLC 2, kinesin light ch 97.1 0.0022 7.6E-08 48.5 8.5 121 14-156 23-156 (283)
112 3ma5_A Tetratricopeptide repea 97.1 0.0027 9.1E-08 43.4 8.0 80 77-169 4-86 (100)
113 2kck_A TPR repeat; tetratricop 97.1 0.00036 1.2E-08 45.9 3.4 80 77-169 3-85 (112)
114 3fp2_A TPR repeat-containing p 97.1 0.002 6.8E-08 54.3 8.7 111 3-127 247-357 (537)
115 2ond_A Cleavage stimulation fa 97.1 0.0068 2.3E-07 48.9 11.7 27 3-29 103-129 (308)
116 3cv0_A Peroxisome targeting si 97.1 0.0026 8.8E-08 49.5 8.8 84 57-156 152-235 (327)
117 1kt0_A FKBP51, 51 kDa FK506-bi 97.1 0.0033 1.1E-07 54.8 10.3 116 3-127 272-398 (457)
118 3mkr_A Coatomer subunit epsilo 97.1 0.0059 2E-07 49.8 11.2 113 4-128 135-248 (291)
119 3cv0_A Peroxisome targeting si 97.1 0.0019 6.6E-08 50.3 7.9 87 57-159 186-272 (327)
120 1elr_A TPR2A-domain of HOP; HO 97.1 0.0073 2.5E-07 40.4 9.9 113 2-126 7-124 (131)
121 2r5s_A Uncharacterized protein 97.0 0.0091 3.1E-07 44.1 11.0 141 2-170 9-154 (176)
122 3nf1_A KLC 1, kinesin light ch 97.0 0.0078 2.7E-07 46.4 10.8 134 2-156 72-224 (311)
123 3sf4_A G-protein-signaling mod 97.0 0.0039 1.3E-07 50.0 9.2 137 3-156 191-336 (406)
124 1zu2_A Mitochondrial import re 97.0 0.00081 2.8E-08 52.8 4.7 81 76-158 32-122 (158)
125 1zu2_A Mitochondrial import re 96.9 0.00073 2.5E-08 53.0 4.3 65 90-157 12-76 (158)
126 3mkr_A Coatomer subunit epsilo 96.9 0.01 3.5E-07 48.3 11.4 98 4-120 70-175 (291)
127 3gw4_A Uncharacterized protein 96.9 0.0084 2.9E-07 43.8 9.8 154 2-172 29-192 (203)
128 1fch_A Peroxisomal targeting s 96.9 0.0064 2.2E-07 48.5 9.7 113 3-129 221-345 (368)
129 2ond_A Cleavage stimulation fa 96.9 0.0068 2.3E-07 48.9 9.7 132 2-158 137-272 (308)
130 2xpi_A Anaphase-promoting comp 96.9 0.016 5.3E-07 49.7 12.4 127 4-156 378-504 (597)
131 3qou_A Protein YBBN; thioredox 96.9 0.014 4.9E-07 47.0 11.6 141 3-170 121-265 (287)
132 3ulq_A Response regulator aspa 96.8 0.0097 3.3E-07 48.9 10.6 133 5-156 109-253 (383)
133 2gw1_A Mitochondrial precursor 96.8 0.0031 1.1E-07 52.5 7.3 109 3-126 241-350 (514)
134 4a1s_A PINS, partner of inscut 96.8 0.0077 2.6E-07 49.1 9.5 150 3-169 227-385 (411)
135 3ro2_A PINS homolog, G-protein 96.8 0.0062 2.1E-07 46.8 8.4 104 36-158 4-114 (338)
136 3fp2_A TPR repeat-containing p 96.8 0.001 3.4E-08 56.1 4.1 97 23-128 11-107 (537)
137 2if4_A ATFKBP42; FKBP-like, al 96.7 0.0027 9.2E-08 53.0 6.6 76 81-169 231-307 (338)
138 1wao_1 Serine/threonine protei 96.7 0.003 1E-07 55.6 7.0 97 57-169 20-117 (477)
139 3q15_A PSP28, response regulat 96.7 0.026 8.8E-07 46.5 12.3 138 3-158 145-292 (378)
140 3ro3_A PINS homolog, G-protein 96.7 0.021 7.1E-07 39.1 10.0 139 2-157 12-159 (164)
141 2yhc_A BAMD, UPF0169 lipoprote 96.7 0.013 4.4E-07 45.1 9.8 111 42-160 9-129 (225)
142 2fo7_A Synthetic consensus TPR 96.7 0.012 4.1E-07 39.0 8.4 92 43-156 7-98 (136)
143 2vsy_A XCC0866; transferase, g 96.6 0.0082 2.8E-07 52.6 9.2 109 40-170 26-135 (568)
144 2kc7_A BFR218_protein; tetratr 96.6 0.0029 1E-07 41.9 5.0 61 85-158 5-66 (99)
145 3qou_A Protein YBBN; thioredox 96.6 0.044 1.5E-06 44.1 12.8 116 2-131 154-272 (287)
146 3u3w_A Transcriptional activat 96.6 0.032 1.1E-06 44.5 11.8 133 6-157 82-226 (293)
147 2gw1_A Mitochondrial precursor 96.6 0.058 2E-06 44.7 13.7 51 77-128 234-284 (514)
148 3ulq_A Response regulator aspa 96.5 0.029 9.9E-07 46.0 11.3 137 3-156 147-293 (383)
149 1qqe_A Vesicular transport pro 96.5 0.071 2.4E-06 42.7 13.2 138 4-158 42-189 (292)
150 2e2e_A Formate-dependent nitri 96.5 0.0071 2.4E-07 44.1 6.6 83 77-170 41-125 (177)
151 3k9i_A BH0479 protein; putativ 96.4 0.0082 2.8E-07 41.4 6.4 94 12-117 3-98 (117)
152 3ro3_A PINS homolog, G-protein 96.4 0.011 3.9E-07 40.4 7.1 65 59-127 32-102 (164)
153 2pzi_A Probable serine/threoni 96.4 0.0089 3E-07 54.7 8.0 105 10-128 402-515 (681)
154 3gw4_A Uncharacterized protein 96.3 0.055 1.9E-06 39.3 10.5 108 12-127 5-120 (203)
155 2qfc_A PLCR protein; TPR, HTH, 96.2 0.12 4E-06 41.1 13.1 121 5-128 121-250 (293)
156 2pzi_A Probable serine/threoni 96.2 0.0055 1.9E-07 56.1 5.7 140 3-170 437-578 (681)
157 2ifu_A Gamma-SNAP; membrane fu 96.2 0.081 2.8E-06 42.7 12.1 119 4-127 41-168 (307)
158 1qqe_A Vesicular transport pro 96.2 0.031 1E-06 44.9 9.4 110 33-158 33-149 (292)
159 3bee_A Putative YFRE protein; 96.2 0.015 5.2E-07 40.6 6.6 79 76-167 2-83 (93)
160 4g1t_A Interferon-induced prot 96.2 0.0041 1.4E-07 51.8 4.2 84 40-127 12-107 (472)
161 1wao_1 Serine/threonine protei 96.1 0.0057 2E-07 53.8 5.1 106 4-123 11-117 (477)
162 2qfc_A PLCR protein; TPR, HTH, 96.1 0.072 2.5E-06 42.4 11.1 133 5-156 81-225 (293)
163 1ouv_A Conserved hypothetical 96.1 0.22 7.6E-06 38.4 13.6 143 2-169 9-155 (273)
164 2if4_A ATFKBP42; FKBP-like, al 96.0 0.008 2.8E-07 50.1 5.3 114 3-125 183-309 (338)
165 2c2l_A CHIP, carboxy terminus 96.0 0.013 4.6E-07 47.2 6.4 79 78-169 2-81 (281)
166 2ooe_A Cleavage stimulation fa 95.9 0.071 2.4E-06 46.1 10.8 112 3-126 325-437 (530)
167 3ma5_A Tetratricopeptide repea 95.8 0.0095 3.3E-07 40.5 4.3 68 41-117 11-78 (100)
168 2hr2_A Hypothetical protein; a 95.7 0.036 1.2E-06 43.2 7.6 66 78-156 9-86 (159)
169 2ifu_A Gamma-SNAP; membrane fu 95.6 0.12 4E-06 41.7 10.7 133 3-154 80-222 (307)
170 1ouv_A Conserved hypothetical 95.6 0.19 6.4E-06 38.8 11.5 78 80-169 182-263 (273)
171 2v5f_A Prolyl 4-hydroxylase su 95.6 0.12 4.2E-06 35.7 9.2 90 31-128 3-93 (104)
172 2ooe_A Cleavage stimulation fa 95.2 0.062 2.1E-06 46.4 8.1 113 2-127 359-476 (530)
173 1pc2_A Mitochondria fission pr 95.2 0.099 3.4E-06 40.7 8.4 81 43-127 38-118 (152)
174 2kat_A Uncharacterized protein 94.7 0.047 1.6E-06 37.1 4.9 65 41-114 23-87 (115)
175 4b4t_Q 26S proteasome regulato 94.2 0.19 6.4E-06 41.2 8.2 78 44-127 142-222 (434)
176 4f3v_A ESX-1 secretion system 93.7 0.64 2.2E-05 39.1 10.8 101 6-117 142-244 (282)
177 3q15_A PSP28, response regulat 93.6 0.45 1.5E-05 38.9 9.5 104 2-115 264-371 (378)
178 1dce_A Protein (RAB geranylger 93.4 0.34 1.2E-05 43.8 9.1 66 79-156 106-173 (567)
179 3ffl_A Anaphase-promoting comp 93.3 0.18 6E-06 40.1 6.2 76 40-116 23-99 (167)
180 1hz4_A MALT regulatory protein 93.2 2.7 9.1E-05 33.7 14.1 118 4-125 19-146 (373)
181 3rjv_A Putative SEL1 repeat pr 92.6 2.2 7.5E-05 32.3 11.5 98 58-169 68-171 (212)
182 1nzn_A CGI-135 protein, fissio 91.5 0.92 3.1E-05 34.2 8.0 72 55-127 50-121 (126)
183 3dra_A Protein farnesyltransfe 91.5 0.86 2.9E-05 38.3 8.6 108 34-156 29-139 (306)
184 3dss_A Geranylgeranyl transfer 91.2 0.81 2.8E-05 39.2 8.3 66 79-156 107-174 (331)
185 3q7a_A Farnesyltransferase alp 91.2 3.2 0.00011 35.8 12.2 137 4-157 59-197 (349)
186 3q7a_A Farnesyltransferase alp 90.9 1.5 5.1E-05 37.9 9.7 106 31-156 47-154 (349)
187 4f3v_A ESX-1 secretion system 90.2 6.8 0.00023 32.8 13.0 128 5-157 108-238 (282)
188 1hz4_A MALT regulatory protein 89.1 6.1 0.00021 31.5 11.5 117 3-127 178-306 (373)
189 1dce_A Protein (RAB geranylger 89.0 0.95 3.2E-05 40.9 7.2 54 77-130 140-194 (567)
190 1xi4_A Clathrin heavy chain; a 88.0 4.4 0.00015 41.9 11.8 112 5-159 1055-1166(1630)
191 3rjv_A Putative SEL1 repeat pr 87.0 3.6 0.00012 31.1 8.5 78 81-170 51-135 (212)
192 4b4t_Q 26S proteasome regulato 86.1 3 0.0001 33.9 8.0 106 3-111 139-247 (434)
193 3dra_A Protein farnesyltransfe 85.6 3 0.0001 34.9 8.0 90 59-158 126-217 (306)
194 3qww_A SET and MYND domain-con 83.2 14 0.00047 32.3 11.5 123 28-156 282-418 (433)
195 4e6h_A MRNA 3'-END-processing 82.1 2.3 8E-05 39.6 6.4 51 78-128 341-392 (679)
196 3dss_A Geranylgeranyl transfer 81.9 6 0.0002 33.7 8.4 83 77-159 141-225 (331)
197 3o48_A Mitochondria fission 1 81.8 4.1 0.00014 31.0 6.6 62 55-118 55-116 (134)
198 3t5v_B Nuclear mRNA export pro 81.6 2.6 8.8E-05 37.8 6.2 99 12-113 139-254 (455)
199 3e4b_A ALGK; tetratricopeptide 80.3 14 0.00049 31.4 10.3 27 94-123 231-257 (452)
200 4h7y_A Dual specificity protei 80.3 0.82 2.8E-05 36.1 2.2 37 91-127 71-107 (161)
201 3t5x_A PCI domain-containing p 79.5 2.4 8.2E-05 33.6 4.8 43 72-114 6-48 (203)
202 1xi4_A Clathrin heavy chain; a 76.7 18 0.00062 37.5 11.2 40 80-124 1221-1260(1630)
203 4e6h_A MRNA 3'-END-processing 76.2 15 0.0005 34.2 9.7 113 2-128 437-555 (679)
204 3u64_A Protein TP_0956; tetrat 74.9 2.9 9.9E-05 35.9 4.3 48 79-126 198-251 (301)
205 3ly7_A Transcriptional activat 74.8 11 0.00039 32.9 8.1 69 76-158 273-341 (372)
206 3e4b_A ALGK; tetratricopeptide 74.7 9.9 0.00034 32.4 7.7 77 82-169 178-257 (452)
207 4b4t_P 26S proteasome regulato 73.3 15 0.00051 32.1 8.6 103 3-111 141-249 (445)
208 2knj_A Microplusin preprotein; 72.0 3.4 0.00012 29.6 3.4 43 39-85 12-76 (90)
209 3ly7_A Transcriptional activat 68.3 9.9 0.00034 33.3 6.2 47 80-131 310-356 (372)
210 3kae_A CDC27, possible protein 67.8 14 0.00047 30.3 6.5 89 12-115 46-149 (242)
211 2uy1_A Cleavage stimulation fa 67.8 7.9 0.00027 34.0 5.6 46 78-124 211-256 (493)
212 1b89_A Protein (clathrin heavy 67.2 9.5 0.00033 34.2 6.0 37 88-124 215-251 (449)
213 1klx_A Cysteine rich protein B 65.2 27 0.00092 24.5 7.2 76 81-168 58-137 (138)
214 3n71_A Histone lysine methyltr 64.9 66 0.0023 28.4 11.1 52 77-128 348-407 (490)
215 1y8m_A FIS1; mitochondria, unk 64.1 11 0.00036 29.1 5.0 72 42-118 44-115 (144)
216 2uy1_A Cleavage stimulation fa 63.6 51 0.0017 28.7 10.0 109 3-128 290-398 (493)
217 3mv2_B Coatomer subunit epsilo 61.8 17 0.00057 30.8 6.3 54 57-111 114-167 (310)
218 1klx_A Cysteine rich protein B 60.7 40 0.0014 23.6 8.7 72 86-169 31-102 (138)
219 4b4t_S RPN3, 26S proteasome re 60.2 9.2 0.00031 35.1 4.6 56 57-112 245-302 (523)
220 2v6x_A Vacuolar protein sortin 59.7 12 0.00042 25.3 4.2 36 77-112 10-45 (85)
221 2cpt_A SKD1 protein, vacuolar 59.7 11 0.00037 27.7 4.2 36 77-112 15-50 (117)
222 2xm6_A Protein corresponding t 57.1 52 0.0018 27.6 8.6 74 84-169 332-408 (490)
223 3bee_A Putative YFRE protein; 56.2 16 0.00053 24.8 4.3 37 76-112 39-75 (93)
224 1b89_A Protein (clathrin heavy 55.2 14 0.00048 33.1 4.9 44 79-127 147-190 (449)
225 2v5f_A Prolyl 4-hydroxylase su 53.3 29 0.00098 23.2 5.3 66 80-158 5-77 (104)
226 2xm6_A Protein corresponding t 52.7 41 0.0014 28.2 7.3 72 85-169 296-372 (490)
227 3n71_A Histone lysine methyltr 52.1 85 0.0029 27.7 9.5 97 6-111 316-424 (490)
228 3qwp_A SET and MYND domain-con 49.5 1.3E+02 0.0043 25.9 11.1 92 58-155 302-406 (429)
229 3mv2_B Coatomer subunit epsilo 46.9 1.3E+02 0.0044 25.3 13.0 147 3-170 104-280 (310)
230 3qww_A SET and MYND domain-con 46.1 48 0.0016 28.8 6.8 36 76-111 378-413 (433)
231 3txn_A 26S proteasome regulato 44.5 1.1E+02 0.0037 26.6 8.8 67 36-110 95-169 (394)
232 4a5x_A MITD1, MIT domain-conta 44.1 31 0.0011 23.7 4.3 35 78-112 14-48 (86)
233 3ax2_A Mitochondrial import re 41.2 23 0.00079 24.1 3.2 29 86-114 23-51 (73)
234 1vyk_A Oxygen-evolving enhance 37.0 1E+02 0.0034 23.6 6.6 81 9-98 26-120 (149)
235 2w2u_A Hypothetical P60 katani 34.2 55 0.0019 22.3 4.2 35 77-111 16-50 (83)
236 2br9_A 14-3-3E, 14-3-3 protein 34.0 1.7E+02 0.0059 23.7 7.9 85 59-148 98-201 (234)
237 1wfd_A Hypothetical protein 15 33.9 54 0.0018 22.7 4.2 31 79-109 14-44 (93)
238 4gns_B Protein CSD3, chitin bi 33.2 3.1E+02 0.01 26.0 10.5 52 76-127 333-384 (754)
239 2v6y_A AAA family ATPase, P60 33.0 59 0.002 22.0 4.2 34 78-111 9-42 (83)
240 1o9d_A 14-3-3-like protein C; 26.5 2.6E+02 0.009 23.0 7.9 84 59-147 103-205 (260)
241 2npm_A 14-3-3 domain containin 25.0 2.9E+02 0.01 22.8 8.9 89 59-155 124-230 (260)
242 2o8p_A 14-3-3 domain containin 22.3 3.1E+02 0.011 22.2 10.6 83 59-148 101-196 (227)
243 3iqu_A 14-3-3 protein sigma; s 22.2 3.2E+02 0.011 22.2 8.4 84 59-147 101-203 (236)
244 3qwp_A SET and MYND domain-con 21.7 82 0.0028 27.1 4.0 95 7-110 295-401 (429)
245 2lo0_A Uncharacterized protein 21.5 71 0.0024 22.0 2.8 26 79-104 39-65 (75)
246 3u64_A Protein TP_0956; tetrat 21.5 89 0.003 26.6 4.1 75 71-157 144-234 (301)
247 4a1g_A Mitotic checkpoint seri 21.2 97 0.0033 23.6 3.9 36 76-111 97-132 (152)
248 3mab_A Uncharacterized protein 21.2 2.1E+02 0.0073 19.9 6.1 62 13-82 11-78 (93)
249 3qhb_A Symerythrin, ORF180; fo 20.5 48 0.0016 26.1 2.1 15 4-18 46-60 (179)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.64 E-value=1.4e-07 Score=68.48 Aligned_cols=111 Identities=9% Similarity=0.089 Sum_probs=91.0
Q ss_pred HHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHH
Q psy5931 38 EKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAW 117 (173)
Q Consensus 38 ~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW 117 (173)
...++++.+|++. +++.++++..+..-- ..+..++.+..+|..+.++|++++|-+.|..|+.++|+.+++|
T Consensus 14 ~~~~~~G~~~~~~------g~~~~A~~~~~~al~---~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 84 (126)
T 4gco_A 14 QEEKNKGNEYFKK------GDYPTAMRHYNEAVK---RDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGY 84 (126)
T ss_dssp HHHHHHHHHHHHT------TCHHHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHc------CCHHHHHHHHHHHHH---hCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHH
Confidence 3467889999984 567788777765432 2456789999999999999999999999999999999999999
Q ss_pred HHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC-CCchhhhhHHHHh
Q psy5931 118 ALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ-KESMSRKYLAKVD 170 (173)
Q Consensus 118 ~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~-~~~k~Rk~laRiL 170 (173)
...|..+..+-. -..|+.+|-+|+.++ ++..++..|+++|
T Consensus 85 ~~lg~~~~~~~~-------------~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 85 IRKAACLVAMRE-------------WSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHTTC-------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHCCC-------------HHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 999998877631 356999999999986 4566788888765
No 2
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.60 E-value=3.1e-07 Score=68.08 Aligned_cols=141 Identities=11% Similarity=0.038 Sum_probs=101.1
Q ss_pred HHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHH
Q psy5931 4 QFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFY 83 (173)
Q Consensus 4 ~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~ 83 (173)
++|.+.|+.|=.|-++..+.+....+ .+--...-.-++||+++ +++.++++.++..-- ..+..++.+
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~----p~~~~~~~~la~~y~~~------~~~~~A~~~~~~al~---~~p~~~~a~ 68 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSP----RQKSIKGFYFAKLYYEA------KEYDLAKKYICTYIN---VQERDPKAH 68 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSH----HHHHTTHHHHHHHHHHT------TCHHHHHHHHHHHHH---HCTTCHHHH
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccC----cccHHHHHHHHHHHHHc------CCHHHHHHHHHHHHH---hCCCCHHHH
Confidence 35667777888888999998865432 12223334568999985 567777777765432 245678999
Q ss_pred HHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHH-HHchhCC-Cch
Q psy5931 84 ALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFM-HACRHQK-ESM 161 (173)
Q Consensus 84 ~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyL-qA~~~~~-~~k 161 (173)
...|.++.++|++++|...|..|+.++|+.+.+|..-|..+.++-..+. |+.+|+ +|++++. +..
T Consensus 69 ~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~-------------aa~~~~~~al~l~P~~~~ 135 (150)
T 4ga2_A 69 RFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDG-------------RAKYWVERAAKLFPGSPA 135 (150)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSS-------------HHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHH-------------HHHHHHHHHHHhCcCCHH
Confidence 9999999999999999999999999999999999999998877654332 777887 5888753 334
Q ss_pred hhhhHHHHh
Q psy5931 162 SRKYLAKVD 170 (173)
Q Consensus 162 ~Rk~laRiL 170 (173)
.....++++
T Consensus 136 ~~~l~~~ll 144 (150)
T 4ga2_A 136 VYKLKEQLL 144 (150)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 455555554
No 3
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.29 E-value=2.6e-06 Score=59.67 Aligned_cols=109 Identities=15% Similarity=0.053 Sum_probs=84.5
Q ss_pred HHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHH
Q psy5931 39 KIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWA 118 (173)
Q Consensus 39 KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~ 118 (173)
.+.+.+.+++.. +++.++++..+..-- ..+..++.+...|..+.++|++++|...|..|++++|+.+++|.
T Consensus 6 ~~~~~g~~~~~~------~~~~~A~~~~~~al~---~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 76 (126)
T 3upv_A 6 EARLEGKEYFTK------SDWPNAVKAYTEMIK---RAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYI 76 (126)
T ss_dssp HHHHHHHHHHHT------TCHHHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHh------cCHHHHHHHHHHHHH---hCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 456778888874 567777776654322 13455799999999999999999999999999999999999999
Q ss_pred HHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC-------CCchhhhhHHHH
Q psy5931 119 LWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ-------KESMSRKYLAKV 169 (173)
Q Consensus 119 ~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~-------~~~k~Rk~laRi 169 (173)
..|..+..+-. -..|+.+|-+|.... ++...+..|.++
T Consensus 77 ~lg~~~~~~~~-------------~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~ 121 (126)
T 3upv_A 77 RKATAQIAVKE-------------YASALETLDAARTKDAEVNNGSSAREIDQLYYKA 121 (126)
T ss_dssp HHHHHHHHTTC-------------HHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-------------HHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHH
Confidence 99998877631 356999999999875 344556666655
No 4
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.25 E-value=2.1e-05 Score=60.62 Aligned_cols=154 Identities=10% Similarity=0.082 Sum_probs=109.2
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHH-------------HHHHHHHHhhhhccCChhHHHHHHHHhhhc
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEK-------------IRQQVKCYLQMAALDGKNQLQEGLEVIEHT 69 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~K-------------lrEq~kc~l~~~~~~~~~el~~gL~vi~~t 69 (173)
..-|....+.|-++-++..+.+...+. -.-.+++.- ..+.+.||..+ +++.++++.++..
T Consensus 8 ~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~------g~~~~A~~~~~~a 80 (208)
T 3urz_A 8 LQKVSAAIEAGQNGQAVSYFRQTIALN-IDRTEMYYWTNVDKNSEISSKLATELALAYKKN------RNYDKAYLFYKEL 80 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-HHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHT------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhC-CCChHHHHHhhhcchhhhhHHHHHHHHHHHHHC------CCHHHHHHHHHHH
Confidence 445677778899999999998875531 112233332 12267888875 4566777666554
Q ss_pred cccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh-----------cCCCCCCCCCc
Q psy5931 70 NLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ-----------FTNPSPPGSAP 138 (173)
Q Consensus 70 nl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~-----------f~~~~~~~~~~ 138 (173)
-- ..|..++.+...|.++..+|++++|-..|..+++++|+.+.+|..-|...... |..-..+ .
T Consensus 81 l~---~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~---~ 154 (208)
T 3urz_A 81 LQ---KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSP---T 154 (208)
T ss_dssp HH---HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CC---C
T ss_pred HH---HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCC---C
Confidence 32 13556889999999999999999999999999999999999999999876332 1111100 1
Q ss_pred hhhh--------------HHHHHHHHHHHchhCCCchhhhhHHHH
Q psy5931 139 NMVL--------------GVFAVTCFMHACRHQKESMSRKYLAKV 169 (173)
Q Consensus 139 ~~~~--------------~~~Ai~CyLqA~~~~~~~k~Rk~laRi 169 (173)
...+ -..|+.+|-+|++...+..+++.+.||
T Consensus 155 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~~~~~l~~i 199 (208)
T 3urz_A 155 KMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTEAQKTLDKI 199 (208)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 1111 246999999999998888889988887
No 5
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.19 E-value=4.5e-06 Score=61.62 Aligned_cols=74 Identities=19% Similarity=0.255 Sum_probs=56.9
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
+...+.+...|.++.++|++++|-+.|..+++++|..+.+|..-|..+..+-. -..|+.+|-+|+..
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~-------------~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 104 TVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGL-------------RDEAVKYFKKALEK 170 (184)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCC-------------HHHHHHHHHHHHhC
Confidence 34467778888888888888889888988888888888888888887766531 35689999999887
Q ss_pred CCCchhhh
Q psy5931 157 QKESMSRK 164 (173)
Q Consensus 157 ~~~~k~Rk 164 (173)
++..++-
T Consensus 171 -~p~~a~~ 177 (184)
T 3vtx_A 171 -EEKKAKY 177 (184)
T ss_dssp -THHHHHH
T ss_pred -CccCHHH
Confidence 3444443
No 6
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.18 E-value=1.1e-05 Score=59.12 Aligned_cols=122 Identities=15% Similarity=0.081 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHhhhhccC-ChhHHHHHHHHhhhcccc-CCC-------chhhHHHHHHHHHHHHHhCCchHHHHHHHH
Q psy5931 35 DCFEKIRQQVKCYLQMAALD-GKNQLQEGLEVIEHTNLK-YLT-------KEMTAEFYALKGMLLAQIGRSAEANKAFSA 105 (173)
Q Consensus 35 daF~KlrEq~kc~l~~~~~~-~~~el~~gL~vi~~tnl~-~F~-------~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~ 105 (173)
+.-..+++.+..++...... .-.-|..+|+++...... ..+ .+..+.++...|..+.++|++++|...|..
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 34566788888888742111 011266666665543221 111 466778999999999999999999999999
Q ss_pred HHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCCch--hhhhHHHH
Q psy5931 106 AVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKESM--SRKYLAKV 169 (173)
Q Consensus 106 Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~~k--~Rk~laRi 169 (173)
|+.++|+.+++|..-|..+..+-. -..|+.+|-+|+.++.+.. .+..|.++
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~-------------~~~A~~~~~~al~l~p~~~~~~~~~l~~~ 141 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWK-------------LDEAEEDLKLLLRNHPAAASVVAREMKIV 141 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhc-------------HHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 999999999999999998877631 3569999999999865543 36666655
No 7
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.17 E-value=7.8e-06 Score=62.00 Aligned_cols=101 Identities=9% Similarity=0.052 Sum_probs=83.3
Q ss_pred HHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHH
Q psy5931 39 KIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWA 118 (173)
Q Consensus 39 KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~ 118 (173)
.+...+.+++++ +++.++++..+..-- ..|..++.+...|..+.++|++++|-..|..|+.++|+.+.+|.
T Consensus 38 ~~~~lg~~~~~~------g~~~eA~~~~~~al~---~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~ 108 (151)
T 3gyz_A 38 DIYSYAYDFYNK------GRIEEAEVFFRFLCI---YDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVF 108 (151)
T ss_dssp HHHHHHHHHHHT------TCHHHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHH
T ss_pred HHHHHHHHHHHc------CCHHHHHHHHHHHHH---hCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHH
Confidence 456678888884 567888887766543 24667889999999999999999999999999999999999999
Q ss_pred HHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCCch
Q psy5931 119 LWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKESM 161 (173)
Q Consensus 119 ~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~~k 161 (173)
.-|..+..+-. -..|+.||-+|+....+..
T Consensus 109 ~lg~~~~~lg~-------------~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 109 HTGQCQLRLKA-------------PLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHTTC-------------HHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHcCC-------------HHHHHHHHHHHHHhCCCHH
Confidence 99988877642 3569999999999876554
No 8
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.12 E-value=2.5e-05 Score=57.60 Aligned_cols=142 Identities=13% Similarity=0.138 Sum_probs=108.5
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
+.+|.+-++.|-++-++..+.+...+ |+- .++. ...+.||.++ +++.++++.++...- ..+..++
T Consensus 9 ~~lG~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~---~~la~~~~~~------~~~~~a~~~~~~~~~---~~~~~~~ 74 (184)
T 3vtx_A 9 MDIGDKKRTKGDFDGAIRAYKKVLKADPNN--VETL---LKLGKTYMDI------GLPNDAIESLKKFVV---LDTTSAE 74 (184)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTC--HHHH---HHHHHHHHHT------TCHHHHHHHHHHHHH---HCCCCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHH---HHHHHHHHHC------CCHHHHHHHHHHHHh---cCchhHH
Confidence 56899999999999999999997654 332 3444 3457888885 456777777666544 2345678
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC-CCc
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ-KES 160 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~-~~~ 160 (173)
.+...|.+....|++++|.+.|..|+.++|+.+.+|...|..+..+-. -..|+.+|-+++... ++.
T Consensus 75 ~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~-------------~~~A~~~~~~~l~~~p~~~ 141 (184)
T 3vtx_A 75 AYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGE-------------HDKAIEAYEKTISIKPGFI 141 (184)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCC-------------chhHHHHHHHHHHhcchhh
Confidence 899999999999999999999999999999999999999998877631 356999999999874 233
Q ss_pred hhhhhHHHHhh
Q psy5931 161 MSRKYLAKVDY 171 (173)
Q Consensus 161 k~Rk~laRiLW 171 (173)
.+...++.++.
T Consensus 142 ~~~~~lg~~~~ 152 (184)
T 3vtx_A 142 RAYQSIGLAYE 152 (184)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 44455555543
No 9
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.11 E-value=2.3e-05 Score=60.83 Aligned_cols=141 Identities=11% Similarity=-0.017 Sum_probs=84.5
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEF 82 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~ 82 (173)
...|.+..+.|-++-++..+.+.-.+. -.-.+++. ..+.|+++. +++.++++.++..-- ..|..++.
T Consensus 9 ~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~---~lg~~~~~~------g~~~~A~~~~~~al~---~~P~~~~a 75 (217)
T 2pl2_A 9 LRLGVQLYALGRYDAALTLFERALKEN-PQDPEALY---WLARTQLKL------GLVNPALENGKTLVA---RTPRYLGG 75 (217)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTS-SSCHHHHH---HHHHHHHHT------TCHHHHHHHHHHHHH---HCTTCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHH---HHHHHHHHc------CCHHHHHHHHHHHHH---hCCCcHHH
Confidence 456777788888888888888866642 12223332 345666663 345555554443321 13455667
Q ss_pred HHHHHHHHHHh-----------CCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHH
Q psy5931 83 YALKGMLLAQI-----------GRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFM 151 (173)
Q Consensus 83 ~~LKG~fl~~L-----------g~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyL 151 (173)
+...|.++.++ |++++|...|..|+.++|+.+.+|...|..+..+-. -..|+.+|-
T Consensus 76 ~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~-------------~~~A~~~~~ 142 (217)
T 2pl2_A 76 YMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGE-------------RDKAEASLK 142 (217)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------HHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCC-------------hHHHHHHHH
Confidence 77777777777 777777777777777777777777777776655421 234566666
Q ss_pred HHchhCCCchhhhhHHHH
Q psy5931 152 HACRHQKESMSRKYLAKV 169 (173)
Q Consensus 152 qA~~~~~~~k~Rk~laRi 169 (173)
+|+...++..++..++++
T Consensus 143 ~al~~~~~~~~~~~la~~ 160 (217)
T 2pl2_A 143 QALALEDTPEIRSALAEL 160 (217)
T ss_dssp HHHHHCCCHHHHHHHHHH
T ss_pred HHHhcccchHHHHHHHHH
Confidence 665554333334444433
No 10
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.10 E-value=1.1e-05 Score=59.22 Aligned_cols=102 Identities=9% Similarity=0.084 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHH
Q psy5931 37 FEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKA 116 (173)
Q Consensus 37 F~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~ka 116 (173)
...+...+.++++. +++.++++..+..--. .+..++.+...|..+.++|++++|...|..|+.++|+.+.+
T Consensus 11 a~~~~~~g~~~~~~------g~~~~A~~~~~~al~~---~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 81 (164)
T 3sz7_A 11 SDKLKSEGNAAMAR------KEYSKAIDLYTQALSI---APANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKA 81 (164)
T ss_dssp HHHHHHHHHHHHHT------TCHHHHHHHHHHHHHH---STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHc------CCHHHHHHHHHHHHHh---CCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHH
Confidence 34566778888874 5677777776654321 24468999999999999999999999999999999999999
Q ss_pred HHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCCc
Q psy5931 117 WALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKES 160 (173)
Q Consensus 117 W~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~~ 160 (173)
|...|..+..+-. -..|+.+|-+++....+.
T Consensus 82 ~~~lg~~~~~~g~-------------~~~A~~~~~~al~~~p~~ 112 (164)
T 3sz7_A 82 WSRLGLARFDMAD-------------YKGAKEAYEKGIEAEGNG 112 (164)
T ss_dssp HHHHHHHHHHTTC-------------HHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHccC-------------HHHHHHHHHHHHHhCCCc
Confidence 9999998877631 356999999999875433
No 11
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.06 E-value=1.3e-05 Score=57.70 Aligned_cols=114 Identities=14% Similarity=0.073 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchh
Q psy5931 33 IVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDV 112 (173)
Q Consensus 33 v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~ 112 (173)
+.|.-...++....++.. +++.++++..+..-- -.|..++.+..+|..+.++|++++|-+.|..|+.++|.
T Consensus 4 ~~d~A~a~~~lG~~~~~~------~~~~~A~~~y~~Al~---~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~ 74 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQ------KDFEKAHVHYDKAIE---LDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRE 74 (127)
T ss_dssp HHHHHHHHHHHHHHHHHT------TCHHHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHc------CCHHHHHHHHHHHHH---hCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcc
Confidence 456666777778888874 456666665554321 13556889999999999999999999999999999987
Q ss_pred hH-------HHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCCchhhhhHHH
Q psy5931 113 MV-------KAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKESMSRKYLAK 168 (173)
Q Consensus 113 ~~-------kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~~k~Rk~laR 168 (173)
.+ ++|..-|.....+- --..|+.+|-+|.....+....+.|..
T Consensus 75 ~~~~~~~~a~~~~~lg~~~~~~~-------------~~~~A~~~~~kal~~~~~~~~~~~l~~ 124 (127)
T 4gcn_A 75 TRADYKLIAKAMSRAGNAFQKQN-------------DLSLAVQWFHRSLSEFRDPELVKKVKE 124 (127)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTT-------------CHHHHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHcC-------------CHHHHHHHHHHHHhhCcCHHHHHHHHH
Confidence 64 45555565554442 246799999999988776666555543
No 12
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.03 E-value=5.5e-05 Score=57.73 Aligned_cols=130 Identities=10% Similarity=-0.010 Sum_probs=98.4
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCC-CcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPS-VPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~-i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
....|.+..+.|-++-++..+.+...+.. -.. +++. ..+.||+.+ +++.++++.++..-- ..+..+
T Consensus 10 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~-~~~~---~~~~~~~~~------~~~~~A~~~~~~al~---~~p~~~ 76 (228)
T 4i17_A 10 LKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDS-VTAY---NCGVCADNI------KKYKEAADYFDIAIK---KNYNLA 76 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCH-HHHH---HHHHHHHHT------TCHHHHHHHHHHHHH---TTCSHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhccCCCCc-HHHH---HHHHHHHHh------hcHHHHHHHHHHHHH---hCcchH
Confidence 35678888899999999999999776532 222 2332 268899985 567777777665533 245578
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccchhhH-------HHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHH
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMV-------KAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHA 153 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~-------kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA 153 (173)
+.+...|.++.++|++++|.+.|..++.++|+.+ .+|..-|.....+- --..|+.+|-+|
T Consensus 77 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~-------------~~~~A~~~~~~a 143 (228)
T 4i17_A 77 NAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAG-------------NIEKAEENYKHA 143 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTT-------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhc-------------cHHHHHHHHHHH
Confidence 8999999999999999999999999999999988 55666666654432 246799999999
Q ss_pred chhC
Q psy5931 154 CRHQ 157 (173)
Q Consensus 154 ~~~~ 157 (173)
++..
T Consensus 144 l~~~ 147 (228)
T 4i17_A 144 TDVT 147 (228)
T ss_dssp TTSS
T ss_pred HhcC
Confidence 9884
No 13
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.01 E-value=4.9e-05 Score=71.41 Aligned_cols=142 Identities=14% Similarity=0.104 Sum_probs=107.7
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
.+.+|.+.+++|-++-++..+.+.-.+ |+ -.++... .+.+|.++ +++.++++..+..-- -.+..+
T Consensus 12 l~nLG~~~~~~G~~~eAi~~~~kAl~l~P~--~~~a~~n---Lg~~l~~~------g~~~eA~~~~~~Al~---l~P~~~ 77 (723)
T 4gyw_A 12 LNNLANIKREQGNIEEAVRLYRKALEVFPE--FAAAHSN---LASVLQQQ------GKLQEALMHYKEAIR---ISPTFA 77 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSC--CHHHHHH---HHHHHHHT------TCHHHHHHHHHHHHH---HCTTCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHH---HHHHHHHc------CCHHHHHHHHHHHHH---hCCCCH
Confidence 577899999999999999999996553 33 2344443 47788775 456666665554321 145678
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC-C
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK-E 159 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~-~ 159 (173)
+.+...|..+.++|++++|.+.|..|++++|+.+.+|..-|..+..+- --..|+.+|-+|++... .
T Consensus 78 ~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g-------------~~~eAi~~~~~Al~l~P~~ 144 (723)
T 4gyw_A 78 DAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSG-------------NIPEAIASYRTALKLKPDF 144 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-------------CHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-------------CHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999999999999999999999887763 14569999999998853 3
Q ss_pred chhhhhHHHHh
Q psy5931 160 SMSRKYLAKVD 170 (173)
Q Consensus 160 ~k~Rk~laRiL 170 (173)
..+...++.++
T Consensus 145 ~~a~~~L~~~l 155 (723)
T 4gyw_A 145 PDAYCNLAHCL 155 (723)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHhhhhhHH
Confidence 44555555554
No 14
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.00 E-value=6.1e-05 Score=52.55 Aligned_cols=114 Identities=13% Similarity=0.018 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHH
Q psy5931 37 FEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKA 116 (173)
Q Consensus 37 F~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~ka 116 (173)
...+...+.+++.. +++.++++..+..--..-..+.....+...|..+.++|++++|.+.|..+++++|+.+.+
T Consensus 28 ~~~~~~~a~~~~~~------~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 101 (148)
T 2dba_A 28 VEQLRKEGNELFKC------GDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKA 101 (148)
T ss_dssp HHHHHHHHHHHHTT------TCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHH
T ss_pred HHHHHHHHHHHHHh------CCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHH
Confidence 44567788888874 578888888776543222334468999999999999999999999999999999999999
Q ss_pred HHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC-CchhhhhHHHH
Q psy5931 117 WALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK-ESMSRKYLAKV 169 (173)
Q Consensus 117 W~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~-~~k~Rk~laRi 169 (173)
|...|..+..+-. -..|+.+|-++..... +...+..++++
T Consensus 102 ~~~~a~~~~~~~~-------------~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (148)
T 2dba_A 102 LYRRSQALEKLGR-------------LDQAVLDLQRCVSLEPKNKVFQEALRNI 142 (148)
T ss_dssp HHHHHHHHHHHTC-------------HHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-------------HHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 9999998777631 3568999999998753 34455555554
No 15
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.00 E-value=2.3e-05 Score=57.88 Aligned_cols=100 Identities=12% Similarity=0.049 Sum_probs=80.5
Q ss_pred ChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCC
Q psy5931 55 GKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPP 134 (173)
Q Consensus 55 ~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~ 134 (173)
.+.++.++++.+...-- .++..+..+..-|.++.++|++++|.+.|..|+.++|+.+.+|...|.....+-.
T Consensus 9 ~~~~~e~ai~~~~~a~~---~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~----- 80 (150)
T 4ga2_A 9 SKADVERYIASVQGSTP---SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEEN----- 80 (150)
T ss_dssp CHHHHHHHHHHHHHHSC---SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----
T ss_pred HcChHHHHHHHHHHhcc---cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCc-----
Confidence 36788888888877554 5778888888899999999999999999999999999999999999998877631
Q ss_pred CCCchhhhHHHHHHHHHHHchhCC-CchhhhhHHHHh
Q psy5931 135 GSAPNMVLGVFAVTCFMHACRHQK-ESMSRKYLAKVD 170 (173)
Q Consensus 135 ~~~~~~~~~~~Ai~CyLqA~~~~~-~~k~Rk~laRiL 170 (173)
-..|+.+|-+|+.... +..+.-.++.++
T Consensus 81 --------~~~A~~~~~~al~~~p~~~~~~~~la~~~ 109 (150)
T 4ga2_A 81 --------TDKAVECYRRSVELNPTQKDLVLKIAELL 109 (150)
T ss_dssp --------HHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred --------hHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 3569999999998753 234445555543
No 16
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.99 E-value=6.3e-05 Score=65.09 Aligned_cols=114 Identities=6% Similarity=0.045 Sum_probs=79.6
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhH-HHHHHHHhhhccccCCCchhhH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQ-LQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~e-l~~gL~vi~~tnl~~F~~~qka 80 (173)
...++.+-.+.|-++-++..+.+.-.+. -.-.+++. ..+.++..+ ++ +.++++.++..-- ..+..+
T Consensus 100 ~~~lg~~~~~~g~~~~Al~~~~~al~l~-P~~~~a~~---~~g~~l~~~------g~d~~eAl~~~~~al~---l~P~~~ 166 (382)
T 2h6f_A 100 YDYFRAVLQRDERSERAFKLTRDAIELN-AANYTVWH---FRRVLLKSL------QKDLHEEMNYITAIIE---EQPKNY 166 (382)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHC-TTCHHHHH---HHHHHHHHT------TCCHHHHHHHHHHHHH---HCTTCH
T ss_pred HHHHHHHHHHCCChHHHHHHHHHHHHhC-ccCHHHHH---HHHHHHHHc------ccCHHHHHHHHHHHHH---HCCCCH
Confidence 3567778888898999999999876542 12223333 335566664 33 6666666655433 234567
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhc
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQF 128 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f 128 (173)
+.+..+|.++.++|++++|-..|..|+.++|..+.+|..-|..+..+-
T Consensus 167 ~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g 214 (382)
T 2h6f_A 167 QVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFK 214 (382)
T ss_dssp HHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcC
Confidence 788888888888888888888888888888888888888887777664
No 17
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.98 E-value=0.00013 Score=56.23 Aligned_cols=113 Identities=15% Similarity=0.256 Sum_probs=51.2
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
...|....+.|-++-++..+.+...+ |+-+ +++. ..+.||+.+ +++.++++.++..--..-.++..++
T Consensus 7 ~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~--~~~~---~l~~~~~~~------~~~~~A~~~~~~a~~~~~~~~~~~~ 75 (272)
T 3u4t_A 7 FRYADFLFKNNNYAEAIEVFNKLEAKKYNSP--YIYN---RRAVCYYEL------AKYDLAQKDIETYFSKVNATKAKSA 75 (272)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHTTCCCS--TTHH---HHHHHHHHT------TCHHHHHHHHHHHHTTSCTTTCCHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH--HHHH---HHHHHHHHH------hhHHHHHHHHHHHHhccCchhHHHH
Confidence 34555555555555555555554332 2111 1211 223355543 2333343333322111112222344
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHh
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEA 126 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~ 126 (173)
.+...|.++.++|++++|.+.|..|+.++|+.+.+|..-|..+..
T Consensus 76 ~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~ 120 (272)
T 3u4t_A 76 DFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYN 120 (272)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH
Confidence 455555555555555555555555555555555555555554443
No 18
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.95 E-value=4e-05 Score=52.39 Aligned_cols=116 Identities=10% Similarity=0.050 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchh
Q psy5931 33 IVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDV 112 (173)
Q Consensus 33 v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~ 112 (173)
...-...+...+.++++. +++.++++.++..-- ..+..++.+...|..+..+|++++|.+.|..++.++|.
T Consensus 12 ~~~~~~~~~~~~~~~~~~------~~~~~A~~~~~~al~---~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 82 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQK------GDYPQAMKHYTEAIK---RNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT 82 (133)
T ss_dssp SSCHHHHHHHHHHHHHHT------TCSHHHHHHHHHHHT---TCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT
T ss_pred CcccHHHHHHHHHHHHHc------CCHHHHHHHHHHHHH---cCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 444566777889999884 456666666665422 12345889999999999999999999999999999999
Q ss_pred hHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC-CchhhhhHHHHh
Q psy5931 113 MVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK-ESMSRKYLAKVD 170 (173)
Q Consensus 113 ~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~-~~k~Rk~laRiL 170 (173)
.+.+|...|..+..+- + -..|+.+|-++..... +..+...+++++
T Consensus 83 ~~~~~~~la~~~~~~~--~-----------~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 128 (133)
T 2lni_A 83 FIKGYTRKAAALEAMK--D-----------YTKAMDVYQKALDLDSSCKEAADGYQRCM 128 (133)
T ss_dssp CHHHHHHHHHHHHHTT--C-----------HHHHHHHHHHHHHHCGGGTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHh--h-----------HHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 9999999998876653 1 3568999999988743 334555566554
No 19
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.93 E-value=2.7e-05 Score=56.23 Aligned_cols=86 Identities=14% Similarity=-0.031 Sum_probs=69.1
Q ss_pred ccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHH
Q psy5931 71 LKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCF 150 (173)
Q Consensus 71 l~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~Cy 150 (173)
+-|. .|+.||-+..+|..+.+.|++++|-+.|..|++++|+.+.+|..-|..+.++- --..|+.+|
T Consensus 5 ~a~i-nP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-------------~~~~A~~~~ 70 (126)
T 4gco_A 5 LAYI-NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLM-------------EFQRALDDC 70 (126)
T ss_dssp --CC-CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-------------CHHHHHHHH
T ss_pred HHHH-CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhc-------------cHHHHHHHH
Confidence 3344 46789999999999999999999999999999999999999999998877663 135699999
Q ss_pred HHHchhCC-CchhhhhHHHHh
Q psy5931 151 MHACRHQK-ESMSRKYLAKVD 170 (173)
Q Consensus 151 LqA~~~~~-~~k~Rk~laRiL 170 (173)
-+|+..+. +.++.-.++.++
T Consensus 71 ~~al~~~p~~~~a~~~lg~~~ 91 (126)
T 4gco_A 71 DTCIRLDSKFIKGYIRKAACL 91 (126)
T ss_dssp HHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHhhhhhhHHHHHHHHHH
Confidence 99998853 345555555554
No 20
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=97.93 E-value=0.00075 Score=51.32 Aligned_cols=157 Identities=14% Similarity=0.083 Sum_probs=106.4
Q ss_pred HHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCC----chhh
Q psy5931 4 QFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLT----KEMT 79 (173)
Q Consensus 4 ~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~----~~qk 79 (173)
..|.+..+.|-++-++..+.+...+. -.-.++. ...+.||+.+ +++.++++.++..--.+-. ....
T Consensus 47 ~~~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~---~~l~~~~~~~------~~~~~A~~~~~~al~~~p~~~~~~~~~ 116 (228)
T 4i17_A 47 NCGVCADNIKKYKEAADYFDIAIKKN-YNLANAY---IGKSAAYRDM------KNNQEYIATLTEGIKAVPGNATIEKLY 116 (228)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTT-CSHHHHH---HHHHHHHHHT------TCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHhhcHHHHHHHHHHHHHhC-cchHHHH---HHHHHHHHHc------ccHHHHHHHHHHHHHHCCCcHHHHHHH
Confidence 46888889999999999999977652 2233333 3467888885 4566666666543221111 2234
Q ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHccchh--hHHHHHHHHHhHHhhcCC--------CCCC-C-----CCchhhhH
Q psy5931 80 AEFYALKGMLLAQIGRSAEANKAFSAAVQMHDV--MVKAWALWGDYMEAQFTN--------PSPP-G-----SAPNMVLG 143 (173)
Q Consensus 80 aE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~--~~kaW~~WG~~~d~~f~~--------~~~~-~-----~~~~~~~~ 143 (173)
++.+...|..+.++|++++|.+.|..|+.++|+ .+.+|...|......-.. .+.. . .......-
T Consensus 117 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 196 (228)
T 4i17_A 117 AIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAF 196 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999 999999888876554322 0000 0 00001112
Q ss_pred HHHHHHHHHHchhCC-CchhhhhHHHHh
Q psy5931 144 VFAVTCFMHACRHQK-ESMSRKYLAKVD 170 (173)
Q Consensus 144 ~~Ai~CyLqA~~~~~-~~k~Rk~laRiL 170 (173)
..|+.+|-+|..... +..++..+++|-
T Consensus 197 ~~A~~~~~~a~~l~p~~~~~~~~l~~i~ 224 (228)
T 4i17_A 197 KKAVDYLGEAVTLSPNRTEIKQMQDQVK 224 (228)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence 679999999998753 345667777664
No 21
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.91 E-value=0.00056 Score=53.41 Aligned_cols=161 Identities=10% Similarity=0.015 Sum_probs=106.4
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CC-CcHHHHHHHHHHHHHHHhhhhcc--CChhHHHHHHHHhhhccccCCCchh
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PS-VPIVDCFEKIRQQVKCYLQMAAL--DGKNQLQEGLEVIEHTNLKYLTKEM 78 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~-i~v~daF~KlrEq~kc~l~~~~~--~~~~el~~gL~vi~~tnl~~F~~~q 78 (173)
..+|.+..+.|-++-++..+.+...+ |+ ....++.. ..+.||+.+... .+.+++.++++.++..--.+-..+.
T Consensus 56 ~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~---~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~ 132 (261)
T 3qky_A 56 FYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEY---ERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHEL 132 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH---HHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTT
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHH---HHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchh
Confidence 45677788888888888888887664 42 23444433 347788761100 0125677777777665433333333
Q ss_pred hHHHH--------------HHHHHHHHHhCCchHHHHHHHHHHccchh---hHHHHHHHHHhHHhhcCCCCCCCCCchhh
Q psy5931 79 TAEFY--------------ALKGMLLAQIGRSAEANKAFSAAVQMHDV---MVKAWALWGDYMEAQFTNPSPPGSAPNMV 141 (173)
Q Consensus 79 kaE~~--------------~LKG~fl~~Lg~~deA~~~F~~Avql~~~---~~kaW~~WG~~~d~~f~~~~~~~~~~~~~ 141 (173)
..+.. ...|.++.+.|++++|...|..++..+|+ .+.+|...|.....+..... ......
T Consensus 133 ~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~---~~~~~~ 209 (261)
T 3qky_A 133 VDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSV---RARQPE 209 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSC---GGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccch---hhcccc
Confidence 33333 77899999999999999999999999998 77899999988776642210 001112
Q ss_pred hHHHHHHHHHHHchhCCCc----hhhhhHHHH
Q psy5931 142 LGVFAVTCFMHACRHQKES----MSRKYLAKV 169 (173)
Q Consensus 142 ~~~~Ai~CyLqA~~~~~~~----k~Rk~laRi 169 (173)
--..|+.+|-+++..+.+. +++..+.++
T Consensus 210 ~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~ 241 (261)
T 3qky_A 210 RYRRAVELYERLLQIFPDSPLLRTAEELYTRA 241 (261)
T ss_dssp HHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 3467999999999876654 456666655
No 22
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.90 E-value=0.00017 Score=47.83 Aligned_cols=109 Identities=14% Similarity=0.031 Sum_probs=83.2
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
....|.+....|-++-++..+.+...+ |+- .++ ....+.||+.+ +++.++++.++..--. .+...
T Consensus 7 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~---~~~~a~~~~~~------~~~~~A~~~~~~~~~~---~~~~~ 72 (118)
T 1elw_A 7 LKEKGNKALSVGNIDDALQCYSEAIKLDPHN--HVL---YSNRSAAYAKK------GDYQKAYEDGCKTVDL---KPDWG 72 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHH---HHHHHHHHHHH------TCHHHHHHHHHHHHHH---CTTCH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCCCc--HHH---HHHHHHHHHhh------ccHHHHHHHHHHHHHh---CcccH
Confidence 356788888999999999999997654 322 122 34557788874 4566776666554321 23457
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhH
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYM 124 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~ 124 (173)
+.+...|..+.++|++++|.+.|..++.++|+.+.+|...+...
T Consensus 73 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 73 KGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 89999999999999999999999999999999999998887764
No 23
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.88 E-value=0.00022 Score=49.67 Aligned_cols=113 Identities=12% Similarity=0.028 Sum_probs=85.3
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
....|....+.|-++-++..+.+...+.. .-.+...-....+.||+.+ +++.++++.++..--. .+...+
T Consensus 31 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~~~~~a~~~~~~------~~~~~A~~~~~~~~~~---~~~~~~ 100 (148)
T 2dba_A 31 LRKEGNELFKCGDYGGALAAYTQALGLDA-TPQDQAVLHRNRAACHLKL------EDYDKAETEASKAIEK---DGGDVK 100 (148)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHTSCC-CHHHHHHHHHHHHHHHHHT------TCHHHHHHHHHHHHHH---TSCCHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHcc-cchHHHHHHHHHHHHHHHH------ccHHHHHHHHHHHHhh---CccCHH
Confidence 35678899999999999999999877532 1111233344567888875 4677777766554321 233478
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhH
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYM 124 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~ 124 (173)
.+...|..+..+|++++|.+.|..++.++|+.+.+|...+...
T Consensus 101 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 101 ALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 8999999999999999999999999999999999998777654
No 24
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.88 E-value=0.00028 Score=48.07 Aligned_cols=113 Identities=13% Similarity=0.097 Sum_probs=86.2
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
+...|.+..+.|-++.++..+.+...+..-. .++ ....+.||+.. +++.++++.++..--. .+..++
T Consensus 19 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~---~~~la~~~~~~------~~~~~A~~~~~~a~~~---~~~~~~ 85 (133)
T 2lni_A 19 VKNKGNECFQKGDYPQAMKHYTEAIKRNPKD-AKL---YSNRAACYTKL------LEFQLALKDCEECIQL---EPTFIK 85 (133)
T ss_dssp HHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC-HHH---HHHHHHHHTTT------TCHHHHHHHHHHHHHH---CTTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc-HHH---HHHHHHHHHHh------ccHHHHHHHHHHHHHh---CCCchH
Confidence 4567888999999999999999987653111 233 34557788774 4566777666554331 234678
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
.+...|..+.++|++++|.+.|..++.++|..+.+|...|.....+
T Consensus 86 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 131 (133)
T 2lni_A 86 GYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQ 131 (133)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999998888766543
No 25
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.86 E-value=0.00021 Score=53.87 Aligned_cols=131 Identities=15% Similarity=0.072 Sum_probs=79.3
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHH------------------------HHHHHHHHhhhhccCChhH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEK------------------------IRQQVKCYLQMAALDGKNQ 58 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~K------------------------lrEq~kc~l~~~~~~~~~e 58 (173)
..+|.+-.+.|-++-++..+.+...+..- .+++.+ ....+.+++.. ++
T Consensus 83 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 154 (258)
T 3uq3_A 83 ARIGNAYHKLGDLKKTIEYYQKSLTEHRT--ADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTK------SD 154 (258)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHT------TC
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhcCch--hHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHh------cC
Confidence 45677778888888888888887664321 111111 12334444442 34
Q ss_pred HHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCc
Q psy5931 59 LQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAP 138 (173)
Q Consensus 59 l~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~ 138 (173)
+.++++.++..--. .+..++.+...|..+.++|++++|.+.|..++.++|+.+.+|...|..+..+- +
T Consensus 155 ~~~A~~~~~~a~~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g--~------- 222 (258)
T 3uq3_A 155 WPNAVKAYTEMIKR---APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVK--E------- 222 (258)
T ss_dssp HHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--C-------
T ss_pred HHHHHHHHHHHHhc---CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh--h-------
Confidence 55666655554221 12345667777777777777777777777777777777777777766665552 1
Q ss_pred hhhhHHHHHHHHHHHchhC
Q psy5931 139 NMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 139 ~~~~~~~Ai~CyLqA~~~~ 157 (173)
-..|+.+|-+|....
T Consensus 223 ----~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 223 ----YASALETLDAARTKD 237 (258)
T ss_dssp ----HHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHhC
Confidence 245777777777664
No 26
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.86 E-value=0.00011 Score=49.76 Aligned_cols=109 Identities=8% Similarity=0.051 Sum_probs=82.1
Q ss_pred HHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhh------
Q psy5931 40 IRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVM------ 113 (173)
Q Consensus 40 lrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~------ 113 (173)
....+.+++.. +++.++++.++..--. .+..++.+...|..+...|++++|...|..++.+.|..
T Consensus 7 ~~~l~~~~~~~------~~~~~A~~~~~~a~~~---~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 77 (131)
T 1elr_A 7 EKELGNDAYKK------KDFDTALKHYDKAKEL---DPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQ 77 (131)
T ss_dssp HHHHHHHHHHT------TCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHh------cCHHHHHHHHHHHHhc---CCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHH
Confidence 34456666663 4566666666543221 23457889999999999999999999999999999987
Q ss_pred -HHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCCchhhhhHHHHh
Q psy5931 114 -VKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKESMSRKYLAKVD 170 (173)
Q Consensus 114 -~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~~k~Rk~laRiL 170 (173)
+.+|...|..+...- + -..|+.+|-++.....+...+..+.++.
T Consensus 78 ~~~~~~~la~~~~~~~--~-----------~~~A~~~~~~~~~~~~~~~~~~~l~~~~ 122 (131)
T 1elr_A 78 IAKAYARIGNSYFKEE--K-----------YKDAIHFYNKSLAEHRTPDVLKKCQQAE 122 (131)
T ss_dssp HHHHHHHHHHHHHHTT--C-----------HHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc--c-----------HHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 888988888876652 1 3568999999999877777777777764
No 27
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.85 E-value=0.00044 Score=49.12 Aligned_cols=128 Identities=14% Similarity=0.055 Sum_probs=87.5
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEF 82 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~ 82 (173)
...|.+..+.|-++.++..+.+...+.. +-.++ ....+.++... +++.++++.++..--. .+...+.
T Consensus 12 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~------~~~~~A~~~~~~~~~~---~~~~~~~ 78 (186)
T 3as5_A 12 RDKGISHAKAGRYSQAVMLLEQVYDADA-FDVDV---ALHLGIAYVKT------GAVDRGTELLERSLAD---APDNVKV 78 (186)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTTTCCTTS-CCHHH---HHHHHHHHHHT------TCHHHHHHHHHHHHHH---CTTCHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCc-cChHH---HHHHHHHHHHc------CCHHHHHHHHHHHHhc---CCCCHHH
Confidence 4567788888899999999988776521 11222 23446677764 4566666665543221 2345678
Q ss_pred HHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 83 YALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 83 ~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
+...|.++...|++++|.+.|..++.++|..+.+|...|..+...-. -..|+.+|-++...
T Consensus 79 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-------------~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 79 ATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGR-------------FDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCc-------------HHHHHHHHHHHHhc
Confidence 88889999999999999999999999988888888888877665421 24566666666655
No 28
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.85 E-value=4.6e-05 Score=57.66 Aligned_cols=83 Identities=11% Similarity=-0.117 Sum_probs=68.7
Q ss_pred chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHch
Q psy5931 76 KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACR 155 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~ 155 (173)
.|..++.+...|..+.+.|++++|...|..|+.++|+.+.+|..-|..+..+- --..|+.||-+|+.
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g-------------~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKE-------------QFQQAADLYAVAFA 98 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT-------------CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-------------cHHHHHHHHHHHHh
Confidence 46778889999999999999999999999999999999999999998887663 14579999999999
Q ss_pred hCC-CchhhhhHHHHhh
Q psy5931 156 HQK-ESMSRKYLAKVDY 171 (173)
Q Consensus 156 ~~~-~~k~Rk~laRiLW 171 (173)
.+. +..+.-.++.++.
T Consensus 99 l~P~~~~~~~~lg~~~~ 115 (151)
T 3gyz_A 99 LGKNDYTPVFHTGQCQL 115 (151)
T ss_dssp HSSSCCHHHHHHHHHHH
T ss_pred hCCCCcHHHHHHHHHHH
Confidence 853 3455555555543
No 29
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.84 E-value=0.00012 Score=56.30 Aligned_cols=142 Identities=10% Similarity=0.035 Sum_probs=109.5
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCCC-cH-HHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhh
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPSV-PI-VDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMT 79 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~i-~v-~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qk 79 (173)
...+|.+-...|-++-|+..+.+....|.- ++ .+++ ...+.||..+ +++.++++.++..-- ..+..
T Consensus 40 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~---~~lg~~~~~~------~~~~~A~~~~~~a~~---~~~~~ 107 (272)
T 3u4t_A 40 YNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADF---EYYGKILMKK------GQDSLAIQQYQAAVD---RDTTR 107 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHH---HHHHHHHHHT------TCHHHHHHHHHHHHH---HSTTC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHH---HHHHHHHHHc------ccHHHHHHHHHHHHh---cCccc
Confidence 467888999999999999999998886622 22 2233 4568888885 678899998887644 23456
Q ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHH-HhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC
Q psy5931 80 AEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWG-DYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK 158 (173)
Q Consensus 80 aE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG-~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~ 158 (173)
++.+...|.++.++|++++|.+.|..++.++|+.+.+|...| ...... + -..|+.+|-+++....
T Consensus 108 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~---~-----------~~~A~~~~~~a~~~~p 173 (272)
T 3u4t_A 108 LDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNK---E-----------YVKADSSFVKVLELKP 173 (272)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTT---C-----------HHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHH---H-----------HHHHHHHHHHHHHhCc
Confidence 789999999999999999999999999999999999999999 444333 2 4679999999999854
Q ss_pred C-chhhhhHHHH
Q psy5931 159 E-SMSRKYLAKV 169 (173)
Q Consensus 159 ~-~k~Rk~laRi 169 (173)
+ ..+...++++
T Consensus 174 ~~~~~~~~~~~~ 185 (272)
T 3u4t_A 174 NIYIGYLWRARA 185 (272)
T ss_dssp TCHHHHHHHHHH
T ss_pred cchHHHHHHHHH
Confidence 3 2344444544
No 30
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.84 E-value=8.2e-05 Score=57.28 Aligned_cols=109 Identities=10% Similarity=0.054 Sum_probs=78.0
Q ss_pred HHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHH----------------HHHHHHHhCCchHHHHH
Q psy5931 39 KIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYAL----------------KGMLLAQIGRSAEANKA 102 (173)
Q Consensus 39 KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~L----------------KG~fl~~Lg~~deA~~~ 102 (173)
.+.+++.++++. +++.++++.++..-- ..|..++.+.. .|..+.++|++++|...
T Consensus 6 ~~~~~g~~~~~~------g~~~~A~~~~~~al~---~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 76 (208)
T 3urz_A 6 EMLQKVSAAIEA------GQNGQAVSYFRQTIA---LNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLF 76 (208)
T ss_dssp HHHHHHHHHHHT------TCHHHHHHHHHHHHH---HCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHC------CCHHHHHHHHHHHHH---hCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHH
Confidence 344566677763 456666666554322 13455666666 99999999999999999
Q ss_pred HHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC-CchhhhhHHHH
Q psy5931 103 FSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK-ESMSRKYLAKV 169 (173)
Q Consensus 103 F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~-~~k~Rk~laRi 169 (173)
|..|++++|+.+.+|..-|..+...-. -..|+.+|-+++..+. +..+.-.++.+
T Consensus 77 ~~~al~~~p~~~~~~~~lg~~~~~~g~-------------~~~A~~~~~~al~~~P~~~~a~~~lg~~ 131 (208)
T 3urz_A 77 YKELLQKAPNNVDCLEACAEMQVCRGQ-------------EKDALRMYEKILQLEADNLAANIFLGNY 131 (208)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHTC-------------HHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHcCC-------------HHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 999999999999999999998877631 3568888888888743 23333344443
No 31
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.84 E-value=5.4e-05 Score=54.11 Aligned_cols=96 Identities=14% Similarity=0.015 Sum_probs=75.9
Q ss_pred HHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHH
Q psy5931 40 IRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWAL 119 (173)
Q Consensus 40 lrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~ 119 (173)
..+.+.++++. +++.+++..++..-- ..+..++.+...|.++.++|++++|-..|..|+.++|+.+.+|..
T Consensus 20 ~~~~g~~~~~~------g~~~~A~~~~~~al~---~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~ 90 (121)
T 1hxi_A 20 PMEEGLSMLKL------ANLAEAALAFEAVCQ---KEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAA 90 (121)
T ss_dssp HHHHHHHHHHT------TCHHHHHHHHHHHHH---HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHc------CCHHHHHHHHHHHHH---HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 45667788874 567777777665433 245568999999999999999999999999999999999999999
Q ss_pred HHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 120 WGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 120 WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
-|..+.+.- --..|+.+|-++++..
T Consensus 91 la~~~~~~g-------------~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 91 LAVSHTNEH-------------NANAALASLRAWLLSQ 115 (121)
T ss_dssp HHHHHHHHH-------------HHHHHHHHHHHHHC--
T ss_pred HHHHHHHcC-------------CHHHHHHHHHHHHHhC
Confidence 998877663 2356889999888763
No 32
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.83 E-value=8.4e-05 Score=52.82 Aligned_cols=105 Identities=10% Similarity=0.075 Sum_probs=79.9
Q ss_pred cHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccch
Q psy5931 32 PIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHD 111 (173)
Q Consensus 32 ~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~ 111 (173)
+..+....+...+.+++.. +++.++++..+..-- ..+..++.+...|..+..+|++++|.+.|..++.++|
T Consensus 8 ~~~~~~~~~~~~a~~~~~~------~~~~~A~~~~~~al~---~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~ 78 (166)
T 1a17_A 8 GALKRAEELKTQANDYFKA------KDYENAIKFYSQAIE---LNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDK 78 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHT------TCHHHHHHHHHHHHH---HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHHHHHHc------cCHHHHHHHHHHHHH---hCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 3445666778888898884 456666665554322 1233488999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC
Q psy5931 112 VMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK 158 (173)
Q Consensus 112 ~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~ 158 (173)
..+.+|...|..+..+-. -..|+.+|-++.....
T Consensus 79 ~~~~~~~~~a~~~~~~~~-------------~~~A~~~~~~a~~~~p 112 (166)
T 1a17_A 79 KYIKGYYRRAASNMALGK-------------FRAALRDYETVVKVKP 112 (166)
T ss_dssp TCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHHHST
T ss_pred ccHHHHHHHHHHHHHhcc-------------HHHHHHHHHHHHHhCC
Confidence 999999999988776531 3568888888887743
No 33
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.83 E-value=8.1e-05 Score=54.98 Aligned_cols=100 Identities=11% Similarity=-0.000 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHH
Q psy5931 37 FEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKA 116 (173)
Q Consensus 37 F~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~ka 116 (173)
...+...+.++++. +++.++++.++..-- ..+..++.+...|..+.++|++++|.+.|..|+.++|+.+.+
T Consensus 21 ~~~~~~~g~~~~~~------g~~~~A~~~~~~al~---~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 91 (148)
T 2vgx_A 21 LEQLYSLAFNQYQS------GXYEDAHXVFQALCV---LDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRF 91 (148)
T ss_dssp HHHHHHHHHHHHHT------TCHHHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHH
T ss_pred HHHHHHHHHHHHHc------CChHHHHHHHHHHHH---cCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchH
Confidence 33455678888874 567788877765432 245568889999999999999999999999999999999999
Q ss_pred HHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC
Q psy5931 117 WALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK 158 (173)
Q Consensus 117 W~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~ 158 (173)
|..-|..+..+-. -..|+.+|-+|+....
T Consensus 92 ~~~lg~~~~~~g~-------------~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 92 PFHAAECLLQXGE-------------LAEAESGLFLAQELIA 120 (148)
T ss_dssp HHHHHHHHHHTTC-------------HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCC-------------HHHHHHHHHHHHHHCc
Confidence 9999988776631 3569999999998753
No 34
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.82 E-value=3.7e-05 Score=60.50 Aligned_cols=70 Identities=17% Similarity=0.025 Sum_probs=62.2
Q ss_pred chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHcc-------chhhHHHH----HHHHHhHHhhcCCCCCCCCCchhhhHH
Q psy5931 76 KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQM-------HDVMVKAW----ALWGDYMEAQFTNPSPPGSAPNMVLGV 144 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql-------~~~~~kaW----~~WG~~~d~~f~~~~~~~~~~~~~~~~ 144 (173)
.+..+..|..+|..+.+||+++||...|..|+.+ +|+.+++| ..-|.-+..+- --.
T Consensus 53 ~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lg-------------r~e 119 (159)
T 2hr2_A 53 AGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLG-------------RGA 119 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTT-------------CHH
T ss_pred ccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCC-------------CHH
Confidence 4467889999999999999999999999999999 99999999 99999888774 246
Q ss_pred HHHHHHHHHchhCC
Q psy5931 145 FAVTCFMHACRHQK 158 (173)
Q Consensus 145 ~Ai~CyLqA~~~~~ 158 (173)
.|+.||-+|+.+..
T Consensus 120 EAl~~y~kAlel~p 133 (159)
T 2hr2_A 120 EAMPEFKKVVEMIE 133 (159)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC
Confidence 79999999998753
No 35
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.82 E-value=5.4e-05 Score=52.79 Aligned_cols=96 Identities=13% Similarity=0.121 Sum_probs=75.1
Q ss_pred HHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHH
Q psy5931 40 IRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWAL 119 (173)
Q Consensus 40 lrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~ 119 (173)
+...+.+++.. +++.++++..+..--. .+..++.+...|..+.++|++++|...|..|+.++|+.+.+|..
T Consensus 12 ~~~~g~~~~~~------~~~~~A~~~~~~al~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 82 (137)
T 3q49_B 12 LKEQGNRLFVG------RKYPEAAACYGRAITR---NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF 82 (137)
T ss_dssp HHHHHHHHHHT------TCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHh------CcHHHHHHHHHHHHhh---CcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 45567777774 4566777666653221 23457899999999999999999999999999999999999999
Q ss_pred HHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 120 WGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 120 WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
-|..+..+-. -..|+.+|-+|....
T Consensus 83 l~~~~~~~~~-------------~~~A~~~~~~a~~~~ 107 (137)
T 3q49_B 83 LGQCQLEMES-------------YDEAIANLQRAYSLA 107 (137)
T ss_dssp HHHHHHHTTC-------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhh-------------HHHHHHHHHHHHHHC
Confidence 9988777631 356888998888764
No 36
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.80 E-value=0.00014 Score=48.25 Aligned_cols=109 Identities=11% Similarity=0.096 Sum_probs=81.0
Q ss_pred HHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHH
Q psy5931 39 KIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWA 118 (173)
Q Consensus 39 KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~ 118 (173)
.+...+.+++.. +++.++++.++..--. .+...+.+...|..+.++|++++|...|..++.++|..+.+|.
T Consensus 6 ~~~~~~~~~~~~------~~~~~A~~~~~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 76 (118)
T 1elw_A 6 ELKEKGNKALSV------GNIDDALQCYSEAIKL---DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYS 76 (118)
T ss_dssp HHHHHHHHHHHT------TCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHc------ccHHHHHHHHHHHHHH---CCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHH
Confidence 455667777764 4566777666654321 2344789999999999999999999999999999999999999
Q ss_pred HHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC-CchhhhhHHHH
Q psy5931 119 LWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK-ESMSRKYLAKV 169 (173)
Q Consensus 119 ~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~-~~k~Rk~laRi 169 (173)
..|..+..+- + -..|+.+|-++..... +...+..++++
T Consensus 77 ~~a~~~~~~~--~-----------~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 115 (118)
T 1elw_A 77 RKAAALEFLN--R-----------FEEAKRTYEEGLKHEANNPQLKEGLQNM 115 (118)
T ss_dssp HHHHHHHHTT--C-----------HHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHh--h-----------HHHHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 9998876653 1 3568899999988743 33445555544
No 37
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.79 E-value=9.9e-05 Score=53.21 Aligned_cols=99 Identities=11% Similarity=-0.019 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHH
Q psy5931 37 FEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKA 116 (173)
Q Consensus 37 F~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~ka 116 (173)
...+...+.++++. +++.++++.++..-- ..+..++.+...|..+.++|++++|.+.|..|+.++|+.+.+
T Consensus 18 ~~~~~~~a~~~~~~------g~~~~A~~~~~~al~---~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 88 (142)
T 2xcb_A 18 LEQLYALGFNQYQA------GKWDDAQKIFQALCM---LDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRF 88 (142)
T ss_dssp HHHHHHHHHHHHHT------TCHHHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHH
T ss_pred HHHHHHHHHHHHHH------ccHHHHHHHHHHHHH---hCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHH
Confidence 34456678888874 567888887776543 245568899999999999999999999999999999999999
Q ss_pred HHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 117 WALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 117 W~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
|..-|..+..+-. -..|+.+|-+|+...
T Consensus 89 ~~~lg~~~~~~g~-------------~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 89 PFHAAECHLQLGD-------------LDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHTTC-------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-------------HHHHHHHHHHHHHhC
Confidence 9998888776631 356888999888764
No 38
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.78 E-value=0.00039 Score=54.70 Aligned_cols=149 Identities=11% Similarity=0.025 Sum_probs=101.5
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcH-HHHHHH------HHHHHHHHhhhhccCChhHHHHHHHHhhhccccC-
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPI-VDCFEK------IRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKY- 73 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v-~daF~K------lrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~- 73 (173)
..+|.+..+.|-++-++..+.+...+ |+.+. ...+.+ ....+.+++.. +++.++++.++..--..
T Consensus 192 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~------~~~~~A~~~~~~~~~~~~ 265 (359)
T 3ieg_A 192 YKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRD------GRYTDATSKYESVMKTEP 265 (359)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHT------TCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHc------CCHHHHHHHHHHHHhcCC
Confidence 45666666777777777777765542 32221 112222 12346666663 45666766665432211
Q ss_pred CCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHH
Q psy5931 74 LTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHA 153 (173)
Q Consensus 74 F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA 153 (173)
-.+....+.+...|.++.++|++++|.+.|..++.++|+.+.+|...|..+...- + -..|+.+|-+|
T Consensus 266 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~-----------~~~A~~~~~~a 332 (359)
T 3ieg_A 266 SVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEE--M-----------YDEAIQDYEAA 332 (359)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--C-----------HHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcC--C-----------HHHHHHHHHHH
Confidence 1334455778889999999999999999999999999999999999999887753 1 46799999999
Q ss_pred chhCCC-chhhhhHHHHh
Q psy5931 154 CRHQKE-SMSRKYLAKVD 170 (173)
Q Consensus 154 ~~~~~~-~k~Rk~laRiL 170 (173)
+....+ ..++..|.++.
T Consensus 333 ~~~~p~~~~~~~~l~~~~ 350 (359)
T 3ieg_A 333 QEHNENDQQIREGLEKAQ 350 (359)
T ss_dssp HTTCTTCHHHHHHHHHHH
T ss_pred HhcCCCChHHHHHHHHHH
Confidence 988543 45566666653
No 39
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.76 E-value=0.00032 Score=52.70 Aligned_cols=111 Identities=13% Similarity=0.182 Sum_probs=61.9
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
..+|.+..+.|-++.++..+.+...+ |. -.+++ ...+.+|..+ +++.++++.++..--. .+...+
T Consensus 61 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~---~~la~~~~~~------~~~~~A~~~~~~~~~~---~~~~~~ 126 (243)
T 2q7f_A 61 INFANLLSSVNELERALAFYDKALELDSS--AATAY---YGAGNVYVVK------EMYKEAKDMFEKALRA---GMENGD 126 (243)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT--CHHHH---HHHHHHHHHT------TCHHHHHHHHHHHHHH---TCCSHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCc--chHHH---HHHHHHHHHh------ccHHHHHHHHHHHHHh---CCCCHH
Confidence 34566666667777777766665443 21 11222 2235555553 3344555444433211 122345
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
.+...|.++.++|++++|.+.|..+++++|..+.+|...|..+...
T Consensus 127 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 172 (243)
T 2q7f_A 127 LFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANE 172 (243)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHc
Confidence 6666677777777777777777777777776666666666665544
No 40
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=97.76 E-value=0.0003 Score=54.42 Aligned_cols=145 Identities=14% Similarity=0.150 Sum_probs=100.8
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccC-----ChhHHHHHHHHhhhccccCCCc
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALD-----GKNQLQEGLEVIEHTNLKYLTK 76 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~-----~~~el~~gL~vi~~tnl~~F~~ 76 (173)
..+|.+..+.|-++-++..+.+...+ |+- .++. ...+.+|.++.... ..+++.++++.++..-- ..
T Consensus 43 ~~lg~~~~~~g~~~~A~~~~~~al~~~P~~--~~a~---~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~---~~ 114 (217)
T 2pl2_A 43 YWLARTQLKLGLVNPALENGKTLVARTPRY--LGGY---MVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAER---VN 114 (217)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHH---HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHH---HC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCc--HHHH---HHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHH---hC
Confidence 46788888999999999999997664 322 2232 23355666530000 01456677766655432 14
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
|..++.+...|.++..+|++++|-..|..|+.++ ..+.+|..-|..+..+-. -..|+.+|-+|+..
T Consensus 115 P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~-------------~~~A~~~~~~al~~ 180 (217)
T 2pl2_A 115 PRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGR-------------LDEALAQYAKALEQ 180 (217)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTC-------------HHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCC-------------HHHHHHHHHHHHHh
Confidence 5678899999999999999999999999999999 889999999988776631 35588888888877
Q ss_pred CC-CchhhhhHHHH
Q psy5931 157 QK-ESMSRKYLAKV 169 (173)
Q Consensus 157 ~~-~~k~Rk~laRi 169 (173)
.. +..++..++.+
T Consensus 181 ~P~~~~~~~~la~~ 194 (217)
T 2pl2_A 181 APKDLDLRVRYASA 194 (217)
T ss_dssp STTCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHH
Confidence 42 33344444444
No 41
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.76 E-value=0.00027 Score=48.65 Aligned_cols=100 Identities=9% Similarity=-0.093 Sum_probs=77.6
Q ss_pred HHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhh---HHHH
Q psy5931 41 RQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVM---VKAW 117 (173)
Q Consensus 41 rEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~---~kaW 117 (173)
...+.++++. +++.++++.++..--.+-..+..++.+...|..+.+.|++++|...|..++..+|+. +.+|
T Consensus 6 ~~~a~~~~~~------~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~ 79 (129)
T 2xev_A 6 YNVAFDALKN------GKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGL 79 (129)
T ss_dssp HHHHHHHHHT------TCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHH
T ss_pred HHHHHHHHHh------CCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHH
Confidence 4567788874 567788777776544444556667899999999999999999999999999999998 8888
Q ss_pred HHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCC
Q psy5931 118 ALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKE 159 (173)
Q Consensus 118 ~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~ 159 (173)
..-|.....+- + -..|+..|-+++..+.+
T Consensus 80 ~~la~~~~~~g--~-----------~~~A~~~~~~~~~~~p~ 108 (129)
T 2xev_A 80 LKLGLSQYGEG--K-----------NTEAQQTLQQVATQYPG 108 (129)
T ss_dssp HHHHHHHHHTT--C-----------HHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHcC--C-----------HHHHHHHHHHHHHHCCC
Confidence 88888776553 1 35688888888876543
No 42
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.74 E-value=0.00021 Score=47.91 Aligned_cols=130 Identities=14% Similarity=0.120 Sum_probs=93.7
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
...+|.+....|-++-++..+.+...... .-.+++ ...+.++... +++.++++.++..--. .+....
T Consensus 4 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~---~~~a~~~~~~------~~~~~A~~~~~~~~~~---~~~~~~ 70 (136)
T 2fo7_A 4 WYNLGNAYYKQGDYDEAIEYYQKALELDP-RSAEAW---YNLGNAYYKQ------GDYDEAIEYYQKALEL---DPRSAE 70 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCT-TCHHHH---HHHHHHHHHH------TCHHHHHHHHHHHHHH---CTTCHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHcCC-cchhHH---HHHHHHHHHh------cCHHHHHHHHHHHHHH---CCCchH
Confidence 35678888888999999999988765421 112222 3357777764 4566666666554221 233467
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
.+...|.++...|++++|.+.|..++...|..+.+|...|..+...- + -..|+.+|-++....
T Consensus 71 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~--~-----------~~~A~~~~~~~~~~~ 133 (136)
T 2fo7_A 71 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQG--D-----------YDEAIEYYQKALELD 133 (136)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT--C-----------HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHc--c-----------HHHHHHHHHHHHccC
Confidence 78889999999999999999999999999999999998888765432 1 356888888887764
No 43
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.73 E-value=0.00014 Score=54.84 Aligned_cols=116 Identities=11% Similarity=-0.048 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccc------cCC-------CchhhHHHHHHHHHHHHHhCCchHHHHH
Q psy5931 36 CFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNL------KYL-------TKEMTAEFYALKGMLLAQIGRSAEANKA 102 (173)
Q Consensus 36 aF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl------~~F-------~~~qkaE~~~LKG~fl~~Lg~~deA~~~ 102 (173)
.-..+++.+.+++.. +++.++++..+..-- ++. ...-....+...|..+.++|++++|...
T Consensus 37 ~~~~~~~~g~~~~~~------~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 110 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKK------NEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDH 110 (198)
T ss_dssp HHHHHHHHHHHHHHT------TCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHc------CCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 455667778888774 456666655543311 110 0112358999999999999999999999
Q ss_pred HHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC-CCchhhhhHHHHh
Q psy5931 103 FSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ-KESMSRKYLAKVD 170 (173)
Q Consensus 103 F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~-~~~k~Rk~laRiL 170 (173)
|..|++++|..+++|...|..+..+-. -..|+.+|-+|+... ++..++..++++.
T Consensus 111 ~~~al~~~p~~~~~~~~lg~~~~~~~~-------------~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 111 ASKVLKIDKNNVKALYKLGVANMYFGF-------------LEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHTC-------------HHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHccc-------------HHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 999999999999999999998876631 356899999998875 3455666666654
No 44
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.72 E-value=0.0001 Score=56.55 Aligned_cols=108 Identities=12% Similarity=0.066 Sum_probs=67.9
Q ss_pred hCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHH
Q psy5931 11 KHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLL 90 (173)
Q Consensus 11 kh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl 90 (173)
..|-++.++..+.++.......-.+-..-....+.||+.. +++.++++.++..--. .+..++.+...|.++
T Consensus 17 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~~~A~~~~~~al~~---~~~~~~~~~~la~~~ 87 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSL------GLRALARNDFSQALAI---RPDMPEVFNYLGIYL 87 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHT------TCHHHHHHHHHHHHHH---CCCCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHc------ccHHHHHHHHHHHHHc---CCCcHHHHHHHHHHH
Confidence 3455666777777766542222222333344557777764 3455555554443221 233566777888888
Q ss_pred HHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 91 AQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 91 ~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
..+|++++|.+.|..|+.++|+.+.+|...|..+..+
T Consensus 88 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~ 124 (275)
T 1xnf_A 88 TQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYG 124 (275)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHT
T ss_pred HHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHh
Confidence 8888888888888888888888888888777776554
No 45
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.72 E-value=0.00013 Score=63.82 Aligned_cols=123 Identities=23% Similarity=0.232 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHhhhhccC---------------ChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCc-
Q psy5931 33 IVDCFEKIRQQVKCYLQMAALD---------------GKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRS- 96 (173)
Q Consensus 33 v~daF~KlrEq~kc~l~~~~~~---------------~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~- 96 (173)
..+.|.++.+.+...+...... -.+++.+++..++...- .++..++.+..+|..+..+|++
T Consensus 43 ~~~~~~~l~~~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~al~~l~~~~~---~~~~~a~~~~~lg~~~~~~g~~~ 119 (474)
T 4abn_A 43 AKHVLQKLQGLVDRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQMEEVLG---SAQVEAQALMLKGKALNVTPDYS 119 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHSCGGGGGGHHHHHHHHHHHHHHHHHHHHT---TCCCCHHHHHHHHHHHTSSSSCC
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHhc---cCchhHHHHHHHHHHHHhccccH
Confidence 4566777777766544421100 11236667777765332 3567899999999999999999
Q ss_pred hHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCCchhhhhHHHHhh
Q psy5931 97 AEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKESMSRKYLAKVDY 171 (173)
Q Consensus 97 deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~~k~Rk~laRiLW 171 (173)
++|.+.|..|+.++|..+.+|..-|..+..+- + -..|+.||-+|+....+..+...++.++.
T Consensus 120 ~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g--~-----------~~~A~~~~~~al~~~p~~~~~~~lg~~~~ 181 (474)
T 4abn_A 120 PEAEVLLSKAVKLEPELVEAWNQLGEVYWKKG--D-----------VTSAHTCFSGALTHCKNKVSLQNLSMVLR 181 (474)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT--C-----------HHHHHHHHHHHHTTCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC--C-----------HHHHHHHHHHHHhhCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999887763 1 46799999999998766666666666654
No 46
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.71 E-value=0.00033 Score=47.07 Aligned_cols=112 Identities=13% Similarity=0.164 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHH
Q psy5931 37 FEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKA 116 (173)
Q Consensus 37 F~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~ka 116 (173)
..-....+.+++.+ +++.++++..+..--. .+..++.+...|.++..+|++++|.+.|..++.++|+.+.+
T Consensus 12 ~~~~~~~~~~~~~~------~~~~~A~~~~~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 82 (131)
T 2vyi_A 12 AERLKTEGNEQMKV------ENFEAAVHFYGKAIEL---NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKA 82 (131)
T ss_dssp HHHHHHHHHHHHHT------TCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hHHHHHHHHHHHHc------cCHHHHHHHHHHHHHc---CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHH
Confidence 34455667777764 4566666665543221 23347889999999999999999999999999999999999
Q ss_pred HHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC-CchhhhhHHHHh
Q psy5931 117 WALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK-ESMSRKYLAKVD 170 (173)
Q Consensus 117 W~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~-~~k~Rk~laRiL 170 (173)
|...|..+..+- + -..|+.+|-++..... +..+...++++.
T Consensus 83 ~~~~~~~~~~~~--~-----------~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 124 (131)
T 2vyi_A 83 YGRMGLALSSLN--K-----------HVEAVAYYKKALELDPDNETYKSNLKIAE 124 (131)
T ss_dssp HHHHHHHHHHTT--C-----------HHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC--C-----------HHHHHHHHHHHHhcCccchHHHHHHHHHH
Confidence 999998876653 1 3568999999988753 344455555543
No 47
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.69 E-value=0.00068 Score=50.88 Aligned_cols=130 Identities=16% Similarity=0.025 Sum_probs=97.5
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEF 82 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~ 82 (173)
..+|.+..+.|-++-++..+.+...+..- -.++ ....+.||+.+ +++.++++.++..--. .+...+.
T Consensus 95 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~---~~~~a~~~~~~------~~~~~A~~~~~~~~~~---~~~~~~~ 161 (243)
T 2q7f_A 95 YGAGNVYVVKEMYKEAKDMFEKALRAGME-NGDL---FYMLGTVLVKL------EQPKLALPYLQRAVEL---NENDTEA 161 (243)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTCC-SHHH---HHHHHHHHHHT------SCHHHHHHHHHHHHHH---CTTCHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHH---HHHHHHHHHHh------ccHHHHHHHHHHHHHh---CCccHHH
Confidence 56788889999999999999987654211 1222 34457788874 4566666666554321 2345778
Q ss_pred HHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC
Q psy5931 83 YALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK 158 (173)
Q Consensus 83 ~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~ 158 (173)
+...|.++.+.|++++|.+.|..+++.+|..+.+|..-|..+...-.- ..|+.+|-++.....
T Consensus 162 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~-------------~~A~~~~~~~~~~~p 224 (243)
T 2q7f_A 162 RFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENR-------------EKALEMLDKAIDIQP 224 (243)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCT-------------THHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCH-------------HHHHHHHHHHHccCc
Confidence 999999999999999999999999999999999999999887765322 458888888887753
No 48
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.68 E-value=0.00061 Score=53.21 Aligned_cols=128 Identities=10% Similarity=-0.084 Sum_probs=89.1
Q ss_pred hHHHHHHHhCC-ChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHH-LTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~-l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
..+|.+....| -++.++..+.+...+.. ...++ ....+.||..+ +++.++++.++..--. .+...+
T Consensus 94 ~~l~~~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~---~~~l~~~~~~~------~~~~~A~~~~~~a~~~---~~~~~~ 160 (330)
T 3hym_B 94 FAVGCYYLMVGHKNEHARRYLSKATTLEK-TYGPA---WIAYGHSFAVE------SEHDQAMAAYFTAAQL---MKGCHL 160 (330)
T ss_dssp HHHHHHHHHSCSCHHHHHHHHHHHHTTCT-TCTHH---HHHHHHHHHHH------TCHHHHHHHHHHHHHH---TTTCSH
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHhCC-ccHHH---HHHHHHHHHHc------cCHHHHHHHHHHHHHh---ccccHH
Confidence 45677888888 88888888888766421 11223 33557777774 4566666666544221 123456
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
.+...|..+...|++++|.+.|..++.++|..+.+|..-|..+...-. -..|+.+|-+++..
T Consensus 161 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~-------------~~~A~~~~~~a~~~ 222 (330)
T 3hym_B 161 PMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGE-------------WKTAEKWFLDALEK 222 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccc-------------HHHHHHHHHHHHHH
Confidence 677799999999999999999999999999999999888887765531 24466667666654
No 49
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.00018 Score=54.25 Aligned_cols=75 Identities=12% Similarity=0.088 Sum_probs=54.6
Q ss_pred HHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHh
Q psy5931 44 VKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDY 123 (173)
Q Consensus 44 ~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~ 123 (173)
..++..+ +++.++++.++..-- ..+..++.+...|.++...|++++|.+.|..++.++|..+.+|...|..
T Consensus 112 ~~~~~~~------~~~~~a~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 182 (258)
T 3uq3_A 112 ADILTKL------RNAEKELKKAEAEAY---VNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAA 182 (258)
T ss_dssp HHHHHHH------HHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHH------hHHHHHHHHHHHHHH---cCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHH
Confidence 4566654 456666666665433 3466778888888888888888888888888888888888888888877
Q ss_pred HHhh
Q psy5931 124 MEAQ 127 (173)
Q Consensus 124 ~d~~ 127 (173)
+...
T Consensus 183 ~~~~ 186 (258)
T 3uq3_A 183 LAKL 186 (258)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 6654
No 50
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.66 E-value=0.00033 Score=49.81 Aligned_cols=128 Identities=16% Similarity=0.083 Sum_probs=96.1
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
..+|.+..+.|-++-++..+.+...+ |.. .+++ ...+.++... +++.++++.++..--. .+..++
T Consensus 46 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~~---~~~a~~~~~~------~~~~~A~~~~~~~~~~---~~~~~~ 111 (186)
T 3as5_A 46 LHLGIAYVKTGAVDRGTELLERSLADAPDN--VKVA---TVLGLTYVQV------QKYDLAVPLLIKVAEA---NPINFN 111 (186)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHH---HHHHHHHHHH------TCHHHHHHHHHHHHHH---CTTCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCC--HHHH---HHHHHHHHHh------cCHHHHHHHHHHHHhc---CcHhHH
Confidence 45778888999999999999987664 322 2332 3456777764 4566666666543221 234578
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
.+...|..+.++|++++|.+.|..++...|..+.+|...|..+...- + -..|+.+|-++....
T Consensus 112 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~--~-----------~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 112 VRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMG--R-----------HEEALPHFKKANELD 174 (186)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--C-----------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcC--C-----------HHHHHHHHHHHHHcC
Confidence 89999999999999999999999999999999999999999887653 1 356888888887764
No 51
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.00011 Score=49.23 Aligned_cols=69 Identities=12% Similarity=-0.037 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC
Q psy5931 79 TAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK 158 (173)
Q Consensus 79 kaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~ 158 (173)
.++.+...|..+.+.|++++|-+.|..|+.++|+.+.+|..-|..+..+- + -..|+.+|-+|+....
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g--~-----------~~~A~~~~~~al~~~p 69 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLG--E-----------YTQAIQMCQQGLRYTS 69 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--C-----------HHHHHHHHHHHHTSCS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhc--C-----------HHHHHHHHHHHHHhCC
Confidence 46778888999999999999999999999999988888888887766553 1 3568888888888755
Q ss_pred Cc
Q psy5931 159 ES 160 (173)
Q Consensus 159 ~~ 160 (173)
+.
T Consensus 70 ~~ 71 (111)
T 2l6j_A 70 TA 71 (111)
T ss_dssp ST
T ss_pred Cc
Confidence 43
No 52
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.64 E-value=0.00068 Score=53.28 Aligned_cols=133 Identities=11% Similarity=0.049 Sum_probs=97.2
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCCC-C-cHHHHHHHH---------HHHHHHHhhhhccCChhHHHHHHHHhhhccc
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIPS-V-PIVDCFEKI---------RQQVKCYLQMAALDGKNQLQEGLEVIEHTNL 71 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp~-i-~v~daF~Kl---------rEq~kc~l~~~~~~~~~el~~gL~vi~~tnl 71 (173)
..+|.+..+.|-++-++..+.+...+.. . .-.++...+ ...+.++... +++.++++.++..--
T Consensus 75 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~------~~~~~A~~~~~~~~~ 148 (359)
T 3ieg_A 75 LQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDG------ADYTAAITFLDKILE 148 (359)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHc------cCHHHHHHHHHHHHH
Confidence 4678888888999999999999877521 0 233344333 3446777764 567777777765432
Q ss_pred cCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHH
Q psy5931 72 KYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFM 151 (173)
Q Consensus 72 ~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyL 151 (173)
. .+...+.+...|.++.++|++++|...|..++.++|..+.+|..-|..+...-. -..|+..|-
T Consensus 149 ~---~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-------------~~~A~~~~~ 212 (359)
T 3ieg_A 149 V---CVWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGD-------------HELSLSEVR 212 (359)
T ss_dssp H---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTC-------------HHHHHHHHH
T ss_pred h---CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-------------HHHHHHHHH
Confidence 1 234578999999999999999999999999999999999999999988776531 244666666
Q ss_pred HHchhC
Q psy5931 152 HACRHQ 157 (173)
Q Consensus 152 qA~~~~ 157 (173)
++....
T Consensus 213 ~a~~~~ 218 (359)
T 3ieg_A 213 ECLKLD 218 (359)
T ss_dssp HHHHHC
T ss_pred HHHhhC
Confidence 666653
No 53
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.64 E-value=0.00089 Score=44.89 Aligned_cols=111 Identities=10% Similarity=0.036 Sum_probs=83.8
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
...|.+....|-++-++..+.+...+ |.- .++ ....+.||... +++.++++.++..--. .+...+
T Consensus 16 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~---~~~~a~~~~~~------~~~~~A~~~~~~~~~~---~~~~~~ 81 (131)
T 2vyi_A 16 KTEGNEQMKVENFEAAVHFYGKAIELNPAN--AVY---FCNRAAAYSKL------GNYAGAVQDCERAICI---DPAYSK 81 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHH---HHHHHHHHHHT------TCHHHHHHHHHHHHHH---CTTCHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHcCCCC--HHH---HHHHHHHHHHh------hchHHHHHHHHHHHhc---CccCHH
Confidence 46788888999999999999987653 322 222 33457788774 4566666666554321 233478
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
.+...|.++.++|++++|.+.|..++.++|+.+.+|..-|..+..+
T Consensus 82 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 127 (131)
T 2vyi_A 82 AYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKL 127 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999998888776654
No 54
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.64 E-value=0.001 Score=49.32 Aligned_cols=126 Identities=11% Similarity=0.051 Sum_probs=84.7
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccC-ChhHHHHHHHHhhhccccCCCchhhH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALD-GKNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~-~~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
...+|.+..+.|-++-++..+.++..+.. . ..+..+.-.+.. .+..... ....++.+++. .|...
T Consensus 43 ~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~--~~~~~~~~~~~~-~~~~~~~~a~~~~~~al~~----------~P~~~ 108 (176)
T 2r5s_A 43 KLAKADCLLETKQFELAQELLATIPLEYQ-D--NSYKSLIAKLEL-HQQAAESPELKRLEQELAA----------NPDNF 108 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTTCCGGGC-C--HHHHHHHHHHHH-HHHHTSCHHHHHHHHHHHH----------STTCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHhhhccC-C--hHHHHHHHHHHH-HhhcccchHHHHHHHHHHh----------CCCCH
Confidence 35678888899999999999998765432 1 122222222211 1111000 01224444432 34557
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccchhh--HHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHc
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMHDVM--VKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHAC 154 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~--~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~ 154 (173)
+.+...|.++...|++++|...|..++..+|+. +.+|...|..+..+...+. |+.+|-++.
T Consensus 109 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~-------------A~~~y~~al 171 (176)
T 2r5s_A 109 ELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNA-------------IASKYRRQL 171 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCH-------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCc-------------HHHHHHHHH
Confidence 899999999999999999999999999999976 6699999998888764443 777776554
No 55
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.63 E-value=0.00068 Score=52.92 Aligned_cols=135 Identities=10% Similarity=-0.057 Sum_probs=100.8
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcC-CCCCcH-HHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYT-IPSVPI-VDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~-lp~i~v-~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
...|....+.|-++-++..+.++.. -|.-+. .++.. ..+.||+++ +++.++++.++..--.+-..+..+
T Consensus 19 ~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~---~lg~~~~~~------~~~~~A~~~~~~~l~~~p~~~~~~ 89 (261)
T 3qky_A 19 FERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQF---YLARAYYQN------KEYLLAASEYERFIQIYQIDPRVP 89 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHH---HHHHHHHHT------TCHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHH---HHHHHHHHh------CcHHHHHHHHHHHHHHCCCCchhH
Confidence 4568888899999999999999876 454432 34443 458899985 578888888877655555556778
Q ss_pred HHHHHHHHHHHH--------hCCchHHHHHHHHHHccchhhHHHHHH-----------------HHHhHHhhcCCCCCCC
Q psy5931 81 EFYALKGMLLAQ--------IGRSAEANKAFSAAVQMHDVMVKAWAL-----------------WGDYMEAQFTNPSPPG 135 (173)
Q Consensus 81 E~~~LKG~fl~~--------Lg~~deA~~~F~~Avql~~~~~kaW~~-----------------WG~~~d~~f~~~~~~~ 135 (173)
+.+...|..+.+ +|++++|...|..++..+|+.+.++.. -|.....+-
T Consensus 90 ~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g------- 162 (261)
T 3qky_A 90 QAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRE------- 162 (261)
T ss_dssp HHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-------
T ss_pred HHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------
Confidence 899999999999 999999999999999999988777643 355444331
Q ss_pred CCchhhhHHHHHHHHHHHchhCCC
Q psy5931 136 SAPNMVLGVFAVTCFMHACRHQKE 159 (173)
Q Consensus 136 ~~~~~~~~~~Ai~CyLqA~~~~~~ 159 (173)
--..|+.+|-+++..+.+
T Consensus 163 ------~~~~A~~~~~~~l~~~p~ 180 (261)
T 3qky_A 163 ------LYEAAAVTYEAVFDAYPD 180 (261)
T ss_dssp ------CHHHHHHHHHHHHHHCTT
T ss_pred ------CHHHHHHHHHHHHHHCCC
Confidence 135688888888876543
No 56
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.63 E-value=0.00089 Score=49.93 Aligned_cols=127 Identities=13% Similarity=-0.019 Sum_probs=92.6
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEF 82 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~ 82 (173)
...|.+..+.|-++-++..+.+.. +. . .+ -....+.||+.+ +++.++++..+..--. .+..++.
T Consensus 10 ~~~g~~~~~~~~~~~A~~~~~~a~--~~-~-~~---~~~~lg~~~~~~------g~~~~A~~~~~~al~~---~~~~~~~ 73 (213)
T 1hh8_A 10 WNEGVLAADKKDWKGALDAFSAVQ--DP-H-SR---ICFNIGCMYTIL------KNMTEAEKAFTRSINR---DKHLAVA 73 (213)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSS--SC-C-HH---HHHHHHHHHHHT------TCHHHHHHHHHHHHHH---CTTCHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHc--CC-C-hH---HHHHHHHHHHHc------CCHHHHHHHHHHHHHh---CccchHH
Confidence 456888889999999999999973 22 1 12 334567788875 4566666666543221 2455789
Q ss_pred HHHHHHHHHHhCCchHHHHHHHHHHccchhh----------------HHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHH
Q psy5931 83 YALKGMLLAQIGRSAEANKAFSAAVQMHDVM----------------VKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFA 146 (173)
Q Consensus 83 ~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~----------------~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~A 146 (173)
+...|..+.++|++++|.+.|..|+++.|.. +.+|...|..+..+-. -..|
T Consensus 74 ~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-------------~~~A 140 (213)
T 1hh8_A 74 YFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEE-------------WKKA 140 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTC-------------HHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccC-------------HHHH
Confidence 9999999999999999999999999976654 4899988888766531 3457
Q ss_pred HHHHHHHchhCC
Q psy5931 147 VTCFMHACRHQK 158 (173)
Q Consensus 147 i~CyLqA~~~~~ 158 (173)
+.+|-+|.....
T Consensus 141 ~~~~~~al~~~p 152 (213)
T 1hh8_A 141 EEQLALATSMKS 152 (213)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHHcCc
Confidence 777777777643
No 57
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.00057 Score=47.44 Aligned_cols=111 Identities=10% Similarity=0.000 Sum_probs=83.0
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
....|....+.|-++-++..+.+...+ |+- .+++ ...+.||+.+ +++.++++.++..-- ..+..+
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~---~~~a~~~~~~------~~~~~A~~~~~~al~---~~p~~~ 72 (126)
T 3upv_A 7 ARLEGKEYFTKSDWPNAVKAYTEMIKRAPED--ARGY---SNRAAALAKL------MSFPEAIADCNKAIE---KDPNFV 72 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHH---HHHHHHHHHT------TCHHHHHHHHHHHHH---HCTTCH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC--hHHH---HHHHHHHHHh------cCHHHHHHHHHHHHH---hCCCcH
Confidence 356788889999999999999987653 332 2333 3458888885 456666666655432 134557
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccc------hhhHHHHHHHHHhHHh
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMH------DVMVKAWALWGDYMEA 126 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~------~~~~kaW~~WG~~~d~ 126 (173)
+.+...|..+..+|++++|...|..++.++ |+.+.+|...+.....
T Consensus 73 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 73 RAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999 7778888776665443
No 58
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.62 E-value=0.00072 Score=55.83 Aligned_cols=148 Identities=12% Similarity=0.033 Sum_probs=102.8
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCC-CCCc-HHHHH------HHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccC
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTI-PSVP-IVDCF------EKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKY 73 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~-v~daF------~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~ 73 (173)
.+.+|.+..++|-++-++..+.++..+ |+-+ +.... .+..+.+.++... +++.++++.++..--..
T Consensus 214 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------g~~~~A~~~~~~~l~~~ 287 (450)
T 2y4t_A 214 FYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRD------GRYTDATSKYESVMKTE 287 (450)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHH------TCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHc------CCHHHHHHHHHHHHhcC
Confidence 356788888999999999999887653 3222 11111 1224447777764 45666666665532111
Q ss_pred -CCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHH
Q psy5931 74 -LTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMH 152 (173)
Q Consensus 74 -F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLq 152 (173)
-.++...+.+...|.++.++|++++|...|..++.++|+.+.+|..-|..+...- + -..|+.+|-+
T Consensus 288 p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~--~-----------~~~A~~~~~~ 354 (450)
T 2y4t_A 288 PSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEE--M-----------YDEAIQDYET 354 (450)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--C-----------HHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhc--C-----------HHHHHHHHHH
Confidence 1344457899999999999999999999999999999999999999999987653 1 3568888888
Q ss_pred HchhCCC-chhhhhHHH
Q psy5931 153 ACRHQKE-SMSRKYLAK 168 (173)
Q Consensus 153 A~~~~~~-~k~Rk~laR 168 (173)
|.....+ ..++..+++
T Consensus 355 al~~~p~~~~~~~~l~~ 371 (450)
T 2y4t_A 355 AQEHNENDQQIREGLEK 371 (450)
T ss_dssp HHTTSSSCHHHHHHHHH
T ss_pred HHHhCcchHHHHHHHHH
Confidence 8876432 334444443
No 59
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.61 E-value=0.001 Score=50.58 Aligned_cols=113 Identities=6% Similarity=0.063 Sum_probs=70.8
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
..+|.+..+.|-++-++..+.+...+ |.. .+++ ...+.+|+.+ +++.++++.++..-- .-..+..++
T Consensus 75 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~---~~la~~~~~~------g~~~~A~~~~~~~~~-~~~~~~~~~ 142 (252)
T 2ho1_A 75 AALAVVFQTEMEPKLADEEYRKALASDSRN--ARVL---NNYGGFLYEQ------KRYEEAYQRLLEASQ-DTLYPERSR 142 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHH---HHHHHHHHHT------TCHHHHHHHHHHHTT-CTTCTTHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCcCc--HHHH---HHHHHHHHHH------hHHHHHHHHHHHHHh-CccCcccHH
Confidence 34566666777777777777665443 221 2222 2335566653 456666666555422 112355677
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
.+...|..+.+.|++++|.+.|..++.+.|..+.+|...|..+...
T Consensus 143 ~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 188 (252)
T 2ho1_A 143 VFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKE 188 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHc
Confidence 7777888888888888888888888888877777777777766554
No 60
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.61 E-value=0.00087 Score=48.79 Aligned_cols=116 Identities=15% Similarity=0.070 Sum_probs=79.9
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC---------CCCcH----H-HHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhh
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI---------PSVPI----V-DCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEH 68 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l---------p~i~v----~-daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~ 68 (173)
...|....+.|-++-++...++...+ |+-+- . .-..=....+.||+.+ +++.++++.++.
T Consensus 15 ~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~------~~~~~A~~~~~~ 88 (162)
T 3rkv_A 15 RQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNI------GDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHH------TCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhc------CcHHHHHHHHHH
Confidence 45677888899999999988886554 22221 1 1111223457788876 456666665554
Q ss_pred ccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhH-HHHHHHHHhHHhh
Q psy5931 69 TNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMV-KAWALWGDYMEAQ 127 (173)
Q Consensus 69 tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~-kaW~~WG~~~d~~ 127 (173)
.-- ..+..++.+..+|..+..+|++++|...|..|+.++|+.+ ..+..-+.....+
T Consensus 89 al~---~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~ 145 (162)
T 3rkv_A 89 VLK---REETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERR 145 (162)
T ss_dssp HHH---HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred HHh---cCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 322 1456688999999999999999999999999999999988 5555555444433
No 61
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.60 E-value=0.001 Score=54.32 Aligned_cols=151 Identities=11% Similarity=-0.022 Sum_probs=101.8
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCC-hhHHHHHHHHhhhccccCCCchhhH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDG-KNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~-~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
+...|......|-++-++..+.+...+..-.......-....+.||+.+..... ..-+.+++++....+ .++..+
T Consensus 51 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~----~~~~~~ 126 (411)
T 4a1s_A 51 LALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMN----DRLGEA 126 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT----CHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcc----CchHHH
Confidence 346788889999999999999987665222222112223455778877532111 111556666665553 368889
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHcc------chhhHHHHHHHHHhHHhhcC----CCCCCCCCchhhhHHHHHHHH
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQM------HDVMVKAWALWGDYMEAQFT----NPSPPGSAPNMVLGVFAVTCF 150 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql------~~~~~kaW~~WG~~~d~~f~----~~~~~~~~~~~~~~~~Ai~Cy 150 (173)
..+...|.++..+|++++|...|..|+.+ .+..+.+|...|..+..+-. ..+..........-..|+.+|
T Consensus 127 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~ 206 (411)
T 4a1s_A 127 KSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFY 206 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999 67778899999988877654 000001112334456677777
Q ss_pred HHHchh
Q psy5931 151 MHACRH 156 (173)
Q Consensus 151 LqA~~~ 156 (173)
-+|...
T Consensus 207 ~~al~~ 212 (411)
T 4a1s_A 207 QENLKL 212 (411)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777654
No 62
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.60 E-value=0.001 Score=51.91 Aligned_cols=145 Identities=11% Similarity=-0.010 Sum_probs=102.5
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhcc------ccCCCc
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTN------LKYLTK 76 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tn------l~~F~~ 76 (173)
..+|.+..+.|-++-++..+.+...+..-. .++ ....+.+|... +++.++++.++..- -+....
T Consensus 163 ~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~---~~~l~~~~~~~------~~~~~A~~~~~~a~~~~~~~~~~~~~ 232 (330)
T 3hym_B 163 LYIGLEYGLTNNSKLAERFFSQALSIAPED-PFV---MHEVGVVAFQN------GEWKTAEKWFLDALEKIKAIGNEVTV 232 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCTTC-HHH---HHHHHHHHHHT------TCHHHHHHHHHHHHHHHTTTSCSCTT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhCCCC-hHH---HHHHHHHHHHc------ccHHHHHHHHHHHHHHhhhccccccc
Confidence 346777778888888888888876652111 122 33456677764 23444444333221 122233
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
+..++.+...|.++.++|++++|...|..+++++|+.+.+|...|..+..+-. -..|+.+|-+|...
T Consensus 233 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~-------------~~~A~~~~~~al~~ 299 (330)
T 3hym_B 233 DKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGN-------------FENAVDYFHTALGL 299 (330)
T ss_dssp TTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTC-------------HHHHHHHHHTTTTT
T ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhcc-------------HHHHHHHHHHHHcc
Confidence 56678999999999999999999999999999999999999999998877631 35689999999887
Q ss_pred CC-CchhhhhHHHHh
Q psy5931 157 QK-ESMSRKYLAKVD 170 (173)
Q Consensus 157 ~~-~~k~Rk~laRiL 170 (173)
.. +..++..+++++
T Consensus 300 ~p~~~~~~~~l~~~~ 314 (330)
T 3hym_B 300 RRDDTFSVTMLGHCI 314 (330)
T ss_dssp CSCCHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHH
Confidence 53 455667777665
No 63
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.60 E-value=0.00084 Score=49.45 Aligned_cols=108 Identities=16% Similarity=0.020 Sum_probs=47.7
Q ss_pred HHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHH
Q psy5931 4 QFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEF 82 (173)
Q Consensus 4 ~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~ 82 (173)
.+|.+....|-++-++..+.+...+ |.- .+++ ...+.||... +++.++++.++..--. .+..++.
T Consensus 13 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~~---~~l~~~~~~~------~~~~~A~~~~~~a~~~---~~~~~~~ 78 (225)
T 2vq2_A 13 QLAMEYMRGQDYRQATASIEDALKSDPKN--ELAW---LVRAEIYQYL------KVNDKAQESFRQALSI---KPDSAEI 78 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHH---HHHHHHHHHT------TCHHHHHHHHHHHHHH---CTTCHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhCccc--hHHH---HHHHHHHHHc------CChHHHHHHHHHHHHh---CCCChHH
Confidence 4455555666666666666554332 211 1121 1224444442 2333333333322110 1223444
Q ss_pred HHHHHHHHHHh-CCchHHHHHHHHHHc--cchhhHHHHHHHHHhHH
Q psy5931 83 YALKGMLLAQI-GRSAEANKAFSAAVQ--MHDVMVKAWALWGDYME 125 (173)
Q Consensus 83 ~~LKG~fl~~L-g~~deA~~~F~~Avq--l~~~~~kaW~~WG~~~d 125 (173)
+...|.++..+ |++++|...|..+++ .+|..+.+|...|..+.
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 124 (225)
T 2vq2_A 79 NNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSA 124 (225)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHH
Confidence 55555555555 555555555555555 33444445554444443
No 64
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.59 E-value=0.00033 Score=61.18 Aligned_cols=150 Identities=14% Similarity=0.128 Sum_probs=103.9
Q ss_pred hHHHHHHHhCCCh-HHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLT-SVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~-~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
...|.+....|-+ +-|+..+.+...+. -.-.+++ ...+.||+++ +++.++++.++..--. .|. ++
T Consensus 106 ~~lg~~~~~~g~~~~~A~~~~~~al~~~-p~~~~a~---~~lg~~~~~~------g~~~~A~~~~~~al~~--~p~--~~ 171 (474)
T 4abn_A 106 MLKGKALNVTPDYSPEAEVLLSKAVKLE-PELVEAW---NQLGEVYWKK------GDVTSAHTCFSGALTH--CKN--KV 171 (474)
T ss_dssp HHHHHHHTSSSSCCHHHHHHHHHHHHHC-TTCHHHH---HHHHHHHHHH------TCHHHHHHHHHHHHTT--CCC--HH
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHhhC-CCCHHHH---HHHHHHHHHc------CCHHHHHHHHHHHHhh--CCC--HH
Confidence 3566777777777 88888888865531 1122343 3457788875 4566777666554321 233 58
Q ss_pred HHHHHHHHHHHh---------CCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHH
Q psy5931 82 FYALKGMLLAQI---------GRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMH 152 (173)
Q Consensus 82 ~~~LKG~fl~~L---------g~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLq 152 (173)
.+...|.++..+ |++++|.+.|..|+.++|+.+.+|..-|..+..+|.... .+..--..|+.+|-+
T Consensus 172 ~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~-----~~~g~~~~A~~~~~~ 246 (474)
T 4abn_A 172 SLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTG-----QNPKISQQALSAYAQ 246 (474)
T ss_dssp HHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTT-----CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhc-----cccchHHHHHHHHHH
Confidence 999999999999 999999999999999999999999999999887743332 122345678888888
Q ss_pred HchhCC----CchhhhhHHHHhh
Q psy5931 153 ACRHQK----ESMSRKYLAKVDY 171 (173)
Q Consensus 153 A~~~~~----~~k~Rk~laRiLW 171 (173)
|+.... +..+.-.++.+++
T Consensus 247 al~~~p~~~~~~~~~~~lg~~~~ 269 (474)
T 4abn_A 247 AEKVDRKASSNPDLHLNRATLHK 269 (474)
T ss_dssp HHHHCGGGGGCHHHHHHHHHHHH
T ss_pred HHHhCCCcccCHHHHHHHHHHHH
Confidence 887643 3444445555443
No 65
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.59 E-value=0.00025 Score=45.84 Aligned_cols=82 Identities=17% Similarity=0.143 Sum_probs=64.8
Q ss_pred chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHch
Q psy5931 76 KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACR 155 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~ 155 (173)
++..++.+...|..+.+.|++++|.+.|..|+.++|..+.+|...|..+...- + -..|+.+|-+++.
T Consensus 5 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~--~-----------~~~A~~~~~~a~~ 71 (91)
T 1na3_A 5 PGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQG--D-----------YDEAIEYYQKALE 71 (91)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--C-----------HHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh--h-----------HHHHHHHHHHHHh
Confidence 45678889999999999999999999999999999999999999998876652 1 3568889988888
Q ss_pred hCC-CchhhhhHHHHh
Q psy5931 156 HQK-ESMSRKYLAKVD 170 (173)
Q Consensus 156 ~~~-~~k~Rk~laRiL 170 (173)
... +..+...+++++
T Consensus 72 ~~p~~~~~~~~l~~~~ 87 (91)
T 1na3_A 72 LDPNNAEAKQNLGNAK 87 (91)
T ss_dssp HCTTCHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHH
Confidence 742 345555555553
No 66
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.58 E-value=0.00099 Score=47.11 Aligned_cols=130 Identities=10% Similarity=-0.055 Sum_probs=90.9
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
....|.+..+.|-++-++..+.+...+ |.- .++ ....+.|++.+ +++.++++.++..--. .+..+
T Consensus 16 ~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~--~~~---~~~~a~~~~~~------~~~~~A~~~~~~a~~~---~~~~~ 81 (166)
T 1a17_A 16 LKTQANDYFKAKDYENAIKFYSQAIELNPSN--AIY---YGNRSLAYLRT------ECYGYALGDATRAIEL---DKKYI 81 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC--HHH---HHHHHHHHHHT------TCHHHHHHHHHHHHHH---CTTCH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCC--hHH---HHHHHHHHHHc------CCHHHHHHHHHHHHHh---CcccH
Confidence 356788889999999999999986553 221 222 33457788874 4566666666543221 23457
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
+.+...|.++.++|++++|.+.|..++.++|..+.+|..++......- ..--..|+.+|-++...
T Consensus 82 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~-----------~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 82 KGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK-----------QKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-----------HHHHHHHHHcccchHHH
Confidence 889999999999999999999999999999999998866554422211 11245677777766543
No 67
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.58 E-value=0.00015 Score=58.64 Aligned_cols=87 Identities=18% Similarity=0.159 Sum_probs=60.9
Q ss_pred hHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCC
Q psy5931 57 NQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGS 136 (173)
Q Consensus 57 ~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~ 136 (173)
+++.++++.++..--. ......++.+...|.++.++|++++|.+.|..++.++|+.+.+|...|..+...-.
T Consensus 191 g~~~~A~~~~~~al~~-~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~------- 262 (365)
T 4eqf_A 191 SVLEGVKELYLEAAHQ-NGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDR------- 262 (365)
T ss_dssp HHHHHHHHHHHHHHHH-SCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------
T ss_pred hhHHHHHHHHHHHHHh-CcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-------
Confidence 4455565555544221 11111577888899999999999999999999999999999999888887766421
Q ss_pred CchhhhHHHHHHHHHHHchhC
Q psy5931 137 APNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 137 ~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
-..|+.+|-+|+...
T Consensus 263 ------~~~A~~~~~~al~~~ 277 (365)
T 4eqf_A 263 ------SEEAVEAYTRALEIQ 277 (365)
T ss_dssp ------HHHHHHHHHHHHHHC
T ss_pred ------HHHHHHHHHHHHhcC
Confidence 245666676666653
No 68
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.55 E-value=0.0015 Score=49.14 Aligned_cols=118 Identities=9% Similarity=0.022 Sum_probs=86.6
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcC-CCCCc------HHHH-----HHHHHHHHHHHhhhhccCChhHHHHHHHHhhhc
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYT-IPSVP------IVDC-----FEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHT 69 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~-lp~i~------v~da-----F~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~t 69 (173)
+...|.+..+.|-++-++..+.+... .|.-+ +.+- ..-....+.||+.+ +++.++++.++..
T Consensus 41 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~------~~~~~A~~~~~~a 114 (198)
T 2fbn_A 41 IKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKN------KDYPKAIDHASKV 114 (198)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHT------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHh------cCHHHHHHHHHHH
Confidence 35678888899999999999998664 33333 1111 01223457788875 4566666666554
Q ss_pred cccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhc
Q psy5931 70 NLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQF 128 (173)
Q Consensus 70 nl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f 128 (173)
--. .+..++.+..+|..+..+|++++|.+.|..|+.++|+.+.+|..-+.....+-
T Consensus 115 l~~---~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 170 (198)
T 2fbn_A 115 LKI---DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLK 170 (198)
T ss_dssp HHH---STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HHh---CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHH
Confidence 331 34567889999999999999999999999999999999999988887776653
No 69
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.55 E-value=0.00033 Score=56.70 Aligned_cols=130 Identities=13% Similarity=0.056 Sum_probs=90.8
Q ss_pred HHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHH
Q psy5931 4 QFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEF 82 (173)
Q Consensus 4 ~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~ 82 (173)
.+|.+..+.|-++-++..+.+...+ |...-.++. ...+.+|... +++.++++.++..--. .+..++.
T Consensus 182 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~---~~l~~~~~~~------g~~~~A~~~~~~al~~---~p~~~~~ 249 (365)
T 4eqf_A 182 RMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQ---TGLGVLFHLS------GEFNRAIDAFNAALTV---RPEDYSL 249 (365)
T ss_dssp -------CCHHHHHHHHHHHHHHHHSCSSCCHHHH---HHHHHHHHHH------TCHHHHHHHHHHHHHH---CTTCHHH
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHH---HHHHHHHHHC------CCHHHHHHHHHHHHHh---CCCCHHH
Confidence 3466777778888888888887653 331122333 2446777774 4566666666554221 2445789
Q ss_pred HHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC
Q psy5931 83 YALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK 158 (173)
Q Consensus 83 ~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~ 158 (173)
+...|..+.++|++++|.+.|..|+.++|+.+.+|..-|..+..+-. -..|+.+|-+|.....
T Consensus 250 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~-------------~~~A~~~~~~al~~~~ 312 (365)
T 4eqf_A 250 WNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGA-------------YREAVSNFLTALSLQR 312 (365)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC-------------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCC-------------HHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999887742 2458888888887643
No 70
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=97.53 E-value=0.00049 Score=58.80 Aligned_cols=122 Identities=11% Similarity=0.006 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHhhhhccC-ChhHHHHHHHHhhhccc-cC-----CCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHcc
Q psy5931 37 FEKIRQQVKCYLQMAALD-GKNQLQEGLEVIEHTNL-KY-----LTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQM 109 (173)
Q Consensus 37 F~KlrEq~kc~l~~~~~~-~~~el~~gL~vi~~tnl-~~-----F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql 109 (173)
-..+++.+.+++...... .-..|+.+|++++...- .. =..+..+..+...|..+.++|++++|-+.|..|+.+
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 344566666666531110 01125556665443210 00 025677899999999999999999999999999999
Q ss_pred chhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC-CchhhhhHHHHhh
Q psy5931 110 HDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK-ESMSRKYLAKVDY 171 (173)
Q Consensus 110 ~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~-~~k~Rk~laRiLW 171 (173)
+|..+++|...|..+..+-. -..|+.+|-+|..... +...+..+++++.
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~-------------~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~ 352 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKE-------------YDQALADLKKAQEIAPEDKAIQAELLKVKQ 352 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHccC-------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 99999999999998877631 3569999999998863 4567777777754
No 71
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.52 E-value=0.0017 Score=47.72 Aligned_cols=114 Identities=11% Similarity=0.010 Sum_probs=82.4
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
..+|.+....|-++-++..+.+...+ |.- .+++ ...+.||... .+++.++++.++..-- .-..+...+
T Consensus 46 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~---~~l~~~~~~~-----~~~~~~A~~~~~~~~~-~~~~~~~~~ 114 (225)
T 2vq2_A 46 LVRAEIYQYLKVNDKAQESFRQALSIKPDS--AEIN---NNYGWFLCGR-----LNRPAESMAYFDKALA-DPTYPTPYI 114 (225)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHHH---HHHHHHHHTT-----TCCHHHHHHHHHHHHT-STTCSCHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCCC--hHHH---HHHHHHHHHh-----cCcHHHHHHHHHHHHc-CcCCcchHH
Confidence 45677888888888888888887553 221 2222 3456677763 0456666666655432 223456678
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
.+...|..+.++|++++|...|..++.+.|..+.+|...|..+...
T Consensus 115 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~ 160 (225)
T 2vq2_A 115 ANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLA 160 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHc
Confidence 8999999999999999999999999999999899998888887665
No 72
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.50 E-value=0.00089 Score=55.26 Aligned_cols=133 Identities=11% Similarity=0.070 Sum_probs=97.5
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCCCCcHH---HHHHHH---------HHHHHHHhhhhccCChhHHHHHHHHhhhcc
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIPSVPIV---DCFEKI---------RQQVKCYLQMAALDGKNQLQEGLEVIEHTN 70 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~---daF~Kl---------rEq~kc~l~~~~~~~~~el~~gL~vi~~tn 70 (173)
..+|.+-.+.|-++-++..+.++..+. -.-. ++...+ ...+.++.+. +++.++++.++..-
T Consensus 98 ~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~------~~~~~A~~~~~~~~ 170 (450)
T 2y4t_A 98 LQRGHLLLKQGKLDEAEDDFKKVLKSN-PSENEEKEAQSQLIKSDEMQRLRSQALNAFGS------GDYTAAIAFLDKIL 170 (450)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTSC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcC-CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHc------CCHHHHHHHHHHHH
Confidence 467888888899999999998887652 1222 444333 3446777764 45777777766543
Q ss_pred ccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHH
Q psy5931 71 LKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCF 150 (173)
Q Consensus 71 l~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~Cy 150 (173)
- ..+...+.+...|..+.++|++++|.+.|..++.++|..+.+|..-|..+...-. ...|+.+|
T Consensus 171 ~---~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-------------~~~A~~~~ 234 (450)
T 2y4t_A 171 E---VCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGD-------------HELSLSEV 234 (450)
T ss_dssp H---HCTTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTC-------------HHHHHHHH
T ss_pred H---hCCCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-------------HHHHHHHH
Confidence 2 1345678899999999999999999999999999999999999999988766531 35577777
Q ss_pred HHHchhCC
Q psy5931 151 MHACRHQK 158 (173)
Q Consensus 151 LqA~~~~~ 158 (173)
-++.....
T Consensus 235 ~~~~~~~p 242 (450)
T 2y4t_A 235 RECLKLDQ 242 (450)
T ss_dssp HHHHHHCT
T ss_pred HHHHHhCC
Confidence 77776643
No 73
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.49 E-value=0.00034 Score=46.04 Aligned_cols=95 Identities=15% Similarity=0.147 Sum_probs=70.0
Q ss_pred HHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchh--hHHHHHH
Q psy5931 42 QQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDV--MVKAWAL 119 (173)
Q Consensus 42 Eq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~--~~kaW~~ 119 (173)
..+.+++.. +++.++++..+..--. .+..++.+...|.++..+|++++|.+.|..++.++|. .+.+|..
T Consensus 11 ~~~~~~~~~------~~~~~A~~~~~~a~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 11 LEGVLQYDA------GNYTESIDLFEKAIQL---DPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp GHHHHHHSS------CCHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred HHHHHHHHh------hhHHHHHHHHHHHHHh---CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 345666653 4555666655543211 1334678899999999999999999999999999999 9999999
Q ss_pred HHHhHHhh-cCCCCCCCCCchhhhHHHHHHHHHHHchhCC
Q psy5931 120 WGDYMEAQ-FTNPSPPGSAPNMVLGVFAVTCFMHACRHQK 158 (173)
Q Consensus 120 WG~~~d~~-f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~ 158 (173)
.|..+..+ -. -..|+.+|-+++....
T Consensus 82 l~~~~~~~~~~-------------~~~A~~~~~~~~~~~p 108 (112)
T 2kck_A 82 KADALRYIEGK-------------EVEAEIAEARAKLEHH 108 (112)
T ss_dssp HHHHHTTCSSC-------------SHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHhCC-------------HHHHHHHHHHHhhccc
Confidence 98887655 31 2458888888887643
No 74
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.49 E-value=0.00077 Score=58.23 Aligned_cols=147 Identities=5% Similarity=-0.053 Sum_probs=98.4
Q ss_pred hHHHHHHHhCCC-hHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHL-TSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l-~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
+..|.+-.+.|- ++-++..+.+.-.+ +-.-.+++.. .+.||..+. ++.++++.++..-- ..+...+
T Consensus 135 ~~~g~~l~~~g~d~~eAl~~~~~al~l-~P~~~~a~~~---~g~~~~~~g------~~~eAl~~~~kal~---ldP~~~~ 201 (382)
T 2h6f_A 135 HFRRVLLKSLQKDLHEEMNYITAIIEE-QPKNYQVWHH---RRVLVEWLR------DPSQELEFIADILN---QDAKNYH 201 (382)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHH-CTTCHHHHHH---HHHHHHHHT------CCTTHHHHHHHHHH---HCTTCHH
T ss_pred HHHHHHHHHcccCHHHHHHHHHHHHHH-CCCCHHHHHH---HHHHHHHcc------CHHHHHHHHHHHHH---hCccCHH
Confidence 456777778886 88888888887654 2222334333 344566542 23334443333221 2456678
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCC-c
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKE-S 160 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~-~ 160 (173)
.+..+|.++.++|++++|-..|..|+.++|..+.+|..-|..+..+-... +......++.+|-+|+....+ .
T Consensus 202 a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~-------~eA~~~~el~~~~~Al~l~P~~~ 274 (382)
T 2h6f_A 202 AWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYN-------DRAVLEREVQYTLEMIKLVPHNE 274 (382)
T ss_dssp HHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSC-------SHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcc-------hHHHHHHHHHHHHHHHHHCCCCH
Confidence 99999999999999999999999999999999999999999888753221 112345568999999987532 2
Q ss_pred hhhhhHHHH
Q psy5931 161 MSRKYLAKV 169 (173)
Q Consensus 161 k~Rk~laRi 169 (173)
.+..+++.+
T Consensus 275 ~a~~~l~~l 283 (382)
T 2h6f_A 275 SAWNYLKGI 283 (382)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 334444433
No 75
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.47 E-value=0.00035 Score=51.07 Aligned_cols=82 Identities=10% Similarity=-0.101 Sum_probs=66.3
Q ss_pred chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHch
Q psy5931 76 KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACR 155 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~ 155 (173)
++..++.+..+|..+.+.|++++|.+.|..|+.++|+.+.+|...|..+..+- + -..|+.+|-+|+.
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g--~-----------~~~A~~~~~~al~ 73 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASG--Q-----------HEKAAEDAELATV 73 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT--C-----------HHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHcc--C-----------HHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999998876653 1 3568999999988
Q ss_pred hCCC-chhhhhHHHHh
Q psy5931 156 HQKE-SMSRKYLAKVD 170 (173)
Q Consensus 156 ~~~~-~k~Rk~laRiL 170 (173)
.+.+ ..+.-.++.++
T Consensus 74 ~~p~~~~~~~~lg~~~ 89 (164)
T 3sz7_A 74 VDPKYSKAWSRLGLAR 89 (164)
T ss_dssp HCTTCHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHH
Confidence 7532 34444444443
No 76
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.47 E-value=0.0033 Score=43.00 Aligned_cols=111 Identities=12% Similarity=0.005 Sum_probs=84.4
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcC-CCCCc-HHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhh
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYT-IPSVP-IVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMT 79 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~-lp~i~-v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qk 79 (173)
....|....+.|-++-++..+.++.. -|+-+ ..++.. ..+.||+.. +++.++++.++..--.+-..+..
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~---~lg~~~~~~------~~~~~A~~~~~~~~~~~p~~~~~ 75 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALY---WLGESYYAT------RNFQLAEAQFRDLVSRYPTHDKA 75 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHH---HHHHHHHHT------TCHHHHHHHHHHHHHHCTTSTTH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHH---HHHHHHHHh------ccHHHHHHHHHHHHHHCCCCccc
Confidence 45678888999999999999999766 45433 224443 357888885 56778888777654434344445
Q ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHH
Q psy5931 80 AEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWG 121 (173)
Q Consensus 80 aE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG 121 (173)
++.+...|..+.++|++++|.+.|..++..+|+.+.++..-.
T Consensus 76 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~ 117 (129)
T 2xev_A 76 AGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQE 117 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHH
Confidence 888999999999999999999999999999998887765433
No 77
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.47 E-value=0.0014 Score=50.49 Aligned_cols=150 Identities=11% Similarity=-0.028 Sum_probs=97.8
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCC-hhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDG-KNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~-~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
...|....+.|-++-++..+.+...+..-.......-....+.+|+....... -.-+..++++....+ .++..+.
T Consensus 9 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~----~~~~~~~ 84 (338)
T 3ro2_A 9 ALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIG----DQLGEAK 84 (338)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT----CHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccc----ccHHHHH
Confidence 45688889999999999999997665322222222334456778887532110 111555555555543 3677899
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhh------HHHHHHHHHhHHhhcCCCCC--C-----CCCchhhhHHHHHH
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVM------VKAWALWGDYMEAQFTNPSP--P-----GSAPNMVLGVFAVT 148 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~------~kaW~~WG~~~d~~f~~~~~--~-----~~~~~~~~~~~Ai~ 148 (173)
.+...|.++..+|++++|...|..|+.+.+.. +.+|..-|.....+...... + ........-..|+.
T Consensus 85 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~ 164 (338)
T 3ro2_A 85 ASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVD 164 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999987754 34777777777666541100 0 01123334566777
Q ss_pred HHHHHchh
Q psy5931 149 CFMHACRH 156 (173)
Q Consensus 149 CyLqA~~~ 156 (173)
.|-+|...
T Consensus 165 ~~~~a~~~ 172 (338)
T 3ro2_A 165 LYEENLSL 172 (338)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776654
No 78
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.45 E-value=0.0036 Score=47.50 Aligned_cols=132 Identities=12% Similarity=-0.024 Sum_probs=97.0
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCCCCc-HHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIPSVP-IVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp~i~-v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
..+|.+..+.|-++-++..+.+....|.-| ..+++ ...+.+|+.. +++.++++.++..--. .+...+
T Consensus 109 ~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~---~~la~~~~~~------g~~~~A~~~~~~~~~~---~~~~~~ 176 (252)
T 2ho1_A 109 NNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVF---ENLGLVSLQM------KKPAQAKEYFEKSLRL---NRNQPS 176 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHH---HHHHHHHHHT------TCHHHHHHHHHHHHHH---CSCCHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHH---HHHHHHHHHc------CCHHHHHHHHHHHHhc---CcccHH
Confidence 467888899999999999999987733222 23333 3457788774 4566666666554221 233478
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCC
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKE 159 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~ 159 (173)
.+...|.++.++|++++|...|..++...|..+.+|...+......- + -..|+..|-++.....+
T Consensus 177 ~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~-----------~~~A~~~~~~~~~~~p~ 241 (252)
T 2ho1_A 177 VALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFE--D-----------RDTAASYGLQLKRLYPG 241 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTT--C-----------HHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHcc--C-----------HHHHHHHHHHHHHHCCC
Confidence 89999999999999999999999999999999999988888776542 1 34577778777776543
No 79
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=97.41 E-value=0.0012 Score=52.84 Aligned_cols=66 Identities=21% Similarity=0.122 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 79 TAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 79 kaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
.++.+...|.++.++|++++|...|..++.++|..+.+|...|..+...-. -..|+..|-+|....
T Consensus 250 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~-------------~~~A~~~~~~al~~~ 315 (368)
T 1fch_A 250 DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGA-------------HREAVEHFLEALNMQ 315 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC-------------HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCC-------------HHHHHHHHHHHHHhC
Confidence 355666666666666666666666666666666666666666666554421 245777777777654
No 80
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.40 E-value=0.0022 Score=42.57 Aligned_cols=109 Identities=14% Similarity=0.128 Sum_probs=78.9
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
..+|.+....|-++-++..+.+.... |.- .++ ....+.|+... +++.+++..++..--. .+...+
T Consensus 13 ~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~--~~~---~~~la~~~~~~------~~~~~A~~~~~~~~~~---~~~~~~ 78 (125)
T 1na0_A 13 YNLGNAYYKQGDYDEAIEYYQKALELDPNN--AEA---WYNLGNAYYKQ------GDYDEAIEYYQKALEL---DPNNAE 78 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHH---HHHHHHHHHHT------TCHHHHHHHHHHHHHH---CTTCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCcCc--HHH---HHHHHHHHHHh------CCHHHHHHHHHHHHHh---CCccHH
Confidence 45678888889999999999887653 321 122 33457777764 4566666666543221 233467
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHH
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYME 125 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d 125 (173)
.+...|..+..+|++++|.+.|..+++++|..+.++...|....
T Consensus 79 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 79 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 122 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 88889999999999999999999999999998888877776543
No 81
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.40 E-value=0.0013 Score=56.46 Aligned_cols=144 Identities=10% Similarity=-0.004 Sum_probs=95.4
Q ss_pred HHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhcccc----CCCchh
Q psy5931 4 QFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLK----YLTKEM 78 (173)
Q Consensus 4 ~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~----~F~~~q 78 (173)
.++.+-.++|-++-++..+.++..+ |.- .++ ....+.+|... +++.+++++++..--. -..++.
T Consensus 446 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~--~~~---~~~l~~~~~~~------g~~~~A~~~~~~~~~~~~~~~~~p~~ 514 (597)
T 2xpi_A 446 FLGMQHMQLGNILLANEYLQSSYALFQYD--PLL---LNELGVVAFNK------SDMQTAINHFQNALLLVKKTQSNEKP 514 (597)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCCCC--HHH---HHHHHHHHHHT------TCHHHHHHHHHHHHHHHHHSCCCSGG
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC--hHH---HHHHHHHHHHh------CCHHHHHHHHHHHHHhhhccccchhh
Confidence 3445555555555555555554432 111 111 22334555543 3456666665543111 124445
Q ss_pred hHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC
Q psy5931 79 TAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK 158 (173)
Q Consensus 79 kaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~ 158 (173)
.++.+...|..+.+.|++++|.+.|..++.++|..+.+|..-|..+...-. -..|+..|-++...+.
T Consensus 515 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~-------------~~~A~~~~~~~l~~~p 581 (597)
T 2xpi_A 515 WAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKI-------------PGLAITHLHESLAISP 581 (597)
T ss_dssp GHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC-------------HHHHHHHHHHHHhcCC
Confidence 589999999999999999999999999999999999999999988776531 3568888888888753
Q ss_pred -CchhhhhHHHHhh
Q psy5931 159 -ESMSRKYLAKVDY 171 (173)
Q Consensus 159 -~~k~Rk~laRiLW 171 (173)
+..++..+++++.
T Consensus 582 ~~~~~~~~l~~~~~ 595 (597)
T 2xpi_A 582 NEIMASDLLKRALE 595 (597)
T ss_dssp TCHHHHHHHHHTTC
T ss_pred CChHHHHHHHHHHh
Confidence 4566777777653
No 82
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.39 E-value=0.0033 Score=50.51 Aligned_cols=151 Identities=11% Similarity=-0.032 Sum_probs=97.7
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCC-hhHHHHHHHHhhhccccCCCchhhH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDG-KNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~-~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
+...|....+.|-++-++..+.+...+..-.......-....+.||+....... ..-+..++++....+ .++..+
T Consensus 12 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~----~~~~~~ 87 (406)
T 3sf4_A 12 LALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIG----DQLGEA 87 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT----CHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcc----ccHHHH
Confidence 346788999999999999999997765322222122234455778877522110 111555555655553 367889
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccchhh------HHHHHHHHHhHHhhcCC-------CCCCCCCchhhhHHHHH
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMHDVM------VKAWALWGDYMEAQFTN-------PSPPGSAPNMVLGVFAV 147 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~------~kaW~~WG~~~d~~f~~-------~~~~~~~~~~~~~~~Ai 147 (173)
+.+...|.++..+|++++|...|..|+.+.+.. +.+|..-|......... ............-..|+
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~ 167 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAV 167 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHH
Confidence 999999999999999999999999999998864 45777777666555430 00001112334455677
Q ss_pred HHHHHHchh
Q psy5931 148 TCFMHACRH 156 (173)
Q Consensus 148 ~CyLqA~~~ 156 (173)
..|-+|...
T Consensus 168 ~~~~~al~~ 176 (406)
T 3sf4_A 168 DFYEENLSL 176 (406)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777766654
No 83
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.39 E-value=0.001 Score=62.46 Aligned_cols=117 Identities=11% Similarity=0.098 Sum_probs=89.5
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
.+.+|.+-.+.|-++-++..+.+.-.+ +-.-.+++. ..+.+|.++ +++.++++..+..-- -.+..++
T Consensus 46 ~~nLg~~l~~~g~~~eA~~~~~~Al~l-~P~~~~a~~---nLg~~l~~~------g~~~~A~~~~~kAl~---l~P~~~~ 112 (723)
T 4gyw_A 46 HSNLASVLQQQGKLQEALMHYKEAIRI-SPTFADAYS---NMGNTLKEM------QDVQGALQCYTRAIQ---INPAFAD 112 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHH---HHHHHHHHT------TCHHHHHHHHHHHHH---HCTTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHH---HHHHHHHHc------CCHHHHHHHHHHHHH---hCCCCHH
Confidence 457889999999999999999986554 122234443 447788875 445555555543311 1456689
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCC
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNP 131 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~ 131 (173)
.+...|.++.++|++++|-+.|..|+.++|+.+.+|...|..+..+..-+
T Consensus 113 a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~ 162 (723)
T 4gyw_A 113 AHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWT 162 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHH
Confidence 99999999999999999999999999999999999999999988876443
No 84
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.39 E-value=0.0012 Score=43.79 Aligned_cols=108 Identities=16% Similarity=0.139 Sum_probs=77.6
Q ss_pred HHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHH
Q psy5931 41 RQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALW 120 (173)
Q Consensus 41 rEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~W 120 (173)
...+.++... +++.++++.++..--. .+...+.+...|..+.+.|++++|.+.|..++.++|..+..|...
T Consensus 13 ~~~~~~~~~~------~~~~~A~~~~~~~~~~---~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 83 (125)
T 1na0_A 13 YNLGNAYYKQ------GDYDEAIEYYQKALEL---DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNL 83 (125)
T ss_dssp HHHHHHHHHT------TCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHc------CCHHHHHHHHHHHHHH---CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 3456677763 4566666666544221 134467888999999999999999999999999999999999998
Q ss_pred HHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC-CchhhhhHHHHh
Q psy5931 121 GDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK-ESMSRKYLAKVD 170 (173)
Q Consensus 121 G~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~-~~k~Rk~laRiL 170 (173)
|..+...- + -..|+.+|-++..... +..++..++.+.
T Consensus 84 a~~~~~~~--~-----------~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 121 (125)
T 1na0_A 84 GNAYYKQG--D-----------YDEAIEYYQKALELDPNNAEAKQNLGNAK 121 (125)
T ss_dssp HHHHHHTT--C-----------HHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHhc--C-----------HHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 88776542 1 3568888888887642 344555555553
No 85
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.39 E-value=0.0016 Score=48.52 Aligned_cols=94 Identities=12% Similarity=0.075 Sum_probs=75.8
Q ss_pred HHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHH
Q psy5931 39 KIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWA 118 (173)
Q Consensus 39 KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~ 118 (173)
.....+.+++.. +++.++++..+.. + .+ .+..+...|..+.++|++++|.+.|..|+.++|+.+.+|.
T Consensus 8 ~~~~~g~~~~~~------~~~~~A~~~~~~a-~---~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 75 (213)
T 1hh8_A 8 SLWNEGVLAADK------KDWKGALDAFSAV-Q---DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYF 75 (213)
T ss_dssp HHHHHHHHHHHT------TCHHHHHHHHHTS-S---SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHh------CCHHHHHHHHHHH-c---CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHH
Confidence 345667777774 6788999988877 3 12 5789999999999999999999999999999999999999
Q ss_pred HHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 119 LWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 119 ~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
.-|..+..+- + -..|+.+|-+|+...
T Consensus 76 ~lg~~~~~~~--~-----------~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 76 QRGMLYYQTE--K-----------YDLAIKDLKEALIQL 101 (213)
T ss_dssp HHHHHHHHTT--C-----------HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcc--c-----------HHHHHHHHHHHHHhC
Confidence 9998876653 1 356888888888754
No 86
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.38 E-value=0.0008 Score=43.37 Aligned_cols=77 Identities=16% Similarity=0.119 Sum_probs=58.6
Q ss_pred HHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHH
Q psy5931 41 RQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALW 120 (173)
Q Consensus 41 rEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~W 120 (173)
...+.+++.. +++.++++..+..--. .+..++.+...|.++.++|++++|.+.|..+++++|+.+.+|...
T Consensus 13 ~~la~~~~~~------~~~~~A~~~~~~a~~~---~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l 83 (91)
T 1na3_A 13 YNLGNAYYKQ------GDYDEAIEYYQKALEL---DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNL 83 (91)
T ss_dssp HHHHHHHHHT------TCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHc------cCHHHHHHHHHHHHhc---CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 4456677764 4566666655543221 234578899999999999999999999999999999999999988
Q ss_pred HHhHHh
Q psy5931 121 GDYMEA 126 (173)
Q Consensus 121 G~~~d~ 126 (173)
|.....
T Consensus 84 ~~~~~~ 89 (91)
T 1na3_A 84 GNAKQK 89 (91)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 876654
No 87
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.37 E-value=0.0005 Score=47.80 Aligned_cols=71 Identities=11% Similarity=0.056 Sum_probs=60.5
Q ss_pred chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHch
Q psy5931 76 KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACR 155 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~ 155 (173)
.+..++.+...|..+.++|++++|.+.|..|+.++|+.+.+|..-|..+..+-. -..|+.+|.+|+.
T Consensus 23 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~-------------~~~A~~~~~~al~ 89 (117)
T 3k9i_A 23 GKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGR-------------YEQGVELLLKIIA 89 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC-------------HHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCC-------------HHHHHHHHHHHHH
Confidence 577889999999999999999999999999999999999999999988777642 3457888888877
Q ss_pred hCCC
Q psy5931 156 HQKE 159 (173)
Q Consensus 156 ~~~~ 159 (173)
...+
T Consensus 90 ~~p~ 93 (117)
T 3k9i_A 90 ETSD 93 (117)
T ss_dssp HHCC
T ss_pred hCCC
Confidence 6433
No 88
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.36 E-value=0.0013 Score=54.79 Aligned_cols=80 Identities=13% Similarity=0.005 Sum_probs=65.5
Q ss_pred hhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 78 MTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 78 qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
.++..+...|..+.++|++++|...|..|+.++|+.+++|...|..+..+-. -..|+.+|-+|+...
T Consensus 194 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~-------------~~~A~~~~~~al~l~ 260 (336)
T 1p5q_A 194 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVND-------------FELARADFQKVLQLY 260 (336)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCC-------------HHHHHHHHHHHHHHC
Confidence 3478999999999999999999999999999999999999999998876631 356899999998875
Q ss_pred C-CchhhhhHHHHh
Q psy5931 158 K-ESMSRKYLAKVD 170 (173)
Q Consensus 158 ~-~~k~Rk~laRiL 170 (173)
. +..++..+++++
T Consensus 261 P~~~~a~~~l~~~~ 274 (336)
T 1p5q_A 261 PNNKAAKTQLAVCQ 274 (336)
T ss_dssp SSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 3 344555555553
No 89
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.35 E-value=0.0013 Score=53.81 Aligned_cols=47 Identities=15% Similarity=0.197 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHH
Q psy5931 79 TAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYME 125 (173)
Q Consensus 79 kaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d 125 (173)
.++.+...|..+.+.|++++|.+.|..++.++|+.+.+|...|....
T Consensus 270 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 316 (388)
T 1w3b_A 270 FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKR 316 (388)
T ss_dssp CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHH
Confidence 34556666666666666666666666666666666666666555543
No 90
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.0013 Score=43.81 Aligned_cols=81 Identities=14% Similarity=0.075 Sum_probs=62.2
Q ss_pred HHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhh-----
Q psy5931 39 KIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVM----- 113 (173)
Q Consensus 39 KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~----- 113 (173)
.....+.+++.. +++.++++..+..-- ..+..++.+...|..+.++|++++|-+.|..|+.++|+.
T Consensus 6 ~~~~~g~~~~~~------~~~~~A~~~~~~al~---~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 76 (111)
T 2l6j_A 6 KQKEQGNSLFKQ------GLYREAVHCYDQLIT---AQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAI 76 (111)
T ss_dssp HHHHHHHHHHTT------TCHHHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHH
T ss_pred HHHHHHHHHHHc------CCHHHHHHHHHHHHh---cCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHH
Confidence 345567777764 456666665554322 134457899999999999999999999999999999997
Q ss_pred -HHHHHHHHHhHHhhc
Q psy5931 114 -VKAWALWGDYMEAQF 128 (173)
Q Consensus 114 -~kaW~~WG~~~d~~f 128 (173)
++++...|.....+-
T Consensus 77 ~~~~~~~~~~~~~~~~ 92 (111)
T 2l6j_A 77 RSKLQYRLELAQGAVG 92 (111)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 888888888877765
No 91
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.33 E-value=0.00073 Score=48.52 Aligned_cols=82 Identities=17% Similarity=0.030 Sum_probs=64.7
Q ss_pred chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHch
Q psy5931 76 KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACR 155 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~ 155 (173)
.+...+.+...|..+.+.|++++|...|..++.++|+.+.+|..-|..+..+- + -..|+.+|-+|+.
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g--~-----------~~~A~~~~~~al~ 80 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLG--L-----------YEQALQSYSYGAL 80 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--C-----------HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHh--h-----------HHHHHHHHHHHHh
Confidence 35667788889999999999999999999999999999999999888876653 1 3569999999998
Q ss_pred hCC-CchhhhhHHHHh
Q psy5931 156 HQK-ESMSRKYLAKVD 170 (173)
Q Consensus 156 ~~~-~~k~Rk~laRiL 170 (173)
.+. +..+.-.++.++
T Consensus 81 ~~p~~~~~~~~lg~~~ 96 (142)
T 2xcb_A 81 MDINEPRFPFHAAECH 96 (142)
T ss_dssp HCTTCTHHHHHHHHHH
T ss_pred cCCCCcHHHHHHHHHH
Confidence 743 333444455443
No 92
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.33 E-value=0.0034 Score=55.10 Aligned_cols=133 Identities=9% Similarity=-0.051 Sum_probs=98.8
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
...+|.+..+.|-++-++..+.+...+. -.-.++. ...+.||+++ +++.++++.++..--. .+..++
T Consensus 26 ~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~---~~lg~~~~~~------g~~~~A~~~~~~al~~---~p~~~~ 92 (568)
T 2vsy_A 26 WLMLADAELGMGDTTAGEMAVQRGLALH-PGHPEAV---ARLGRVRWTQ------QRHAEAAVLLQQASDA---APEHPG 92 (568)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTTS-TTCHHHH---HHHHHHHHHT------TCHHHHHHHHHHHHHH---CTTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHH---HHHHHHHHHC------CCHHHHHHHHHHHHhc---CCCCHH
Confidence 3567888899999999999999987752 1223333 4457788875 4566666666544321 344588
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
.+...|..+.++|++++|.+.|..|++++|+.+.+|...|..+..+..-. -...|+.+|-++...+
T Consensus 93 ~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g----------~~~~A~~~~~~al~~~ 158 (568)
T 2vsy_A 93 IALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWR----------ALDVLSAQVRAAVAQG 158 (568)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCT----------THHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccc----------cHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999887763211 1456777777777664
No 93
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.32 E-value=0.002 Score=52.59 Aligned_cols=128 Identities=13% Similarity=0.103 Sum_probs=90.4
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
..+|.+-.+.|-++-++..+.+...+ |.. .+++ ...+.+|.+. +++.++++.++..--. .+..++
T Consensus 241 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~---~~l~~~~~~~------g~~~~A~~~~~~al~~---~p~~~~ 306 (388)
T 1w3b_A 241 GNLACVYYEQGLIDLAIDTYRRAIELQPHF--PDAY---CNLANALKEK------GSVAEAEDCYNTALRL---CPTHAD 306 (388)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSC--HHHH---HHHHHHHHHH------SCHHHHHHHHHHHHHH---CTTCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--HHHH---HHHHHHHHHc------CCHHHHHHHHHHHHhh---CcccHH
Confidence 34566677777777777777776554 322 2332 2345566653 3455666655543221 244577
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
.+...|.++.+.|+.++|.+.|..++.++|+.+.+|..-|..+.+.-. -..|+.+|-+|++..
T Consensus 307 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~-------------~~~A~~~~~~a~~~~ 369 (388)
T 1w3b_A 307 SLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGK-------------LQEALMHYKEAIRIS 369 (388)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTC-------------CHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC-------------HHHHHHHHHHHHhhC
Confidence 888999999999999999999999999999999999988887766531 246888998888764
No 94
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=97.32 E-value=0.0016 Score=54.39 Aligned_cols=120 Identities=11% Similarity=0.039 Sum_probs=79.3
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC--------CCCcHHHHHHHHHHHHHHHhhhhccCChhH-HHHHHHHhhhccccC
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI--------PSVPIVDCFEKIRQQVKCYLQMAALDGKNQ-LQEGLEVIEHTNLKY 73 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l--------p~i~v~daF~KlrEq~kc~l~~~~~~~~~e-l~~gL~vi~~tnl~~ 73 (173)
|.+|.|-...|-++-++..+.+--.+ ..+.+..++ -..+.+|+.+.....-.+ +..++++..... +-
T Consensus 55 n~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~---~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~-~~ 130 (472)
T 4g1t_A 55 NLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTW---GNYAWVYYHMGRLSDVQIYVDKVKHVCEKFS-SP 130 (472)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHH---HHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHH---HHHHHHHHHcCChHHHHHHHHHHHHHhHhcc-cc
Confidence 56889999999999999998873221 012222222 234677777521100001 333344333221 11
Q ss_pred CCchhhHHHHHHHHHHHHHhCC--chHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 74 LTKEMTAEFYALKGMLLAQIGR--SAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 74 F~~~qkaE~~~LKG~fl~~Lg~--~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
.....++.+..+|..+.++|+ +++|-..|..|+.++|+.+.+|...|....++
T Consensus 131 -~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l 185 (472)
T 4g1t_A 131 -YRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRL 185 (472)
T ss_dssp -SCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred -cchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 234578999999999988874 79999999999999999999999999876554
No 95
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.31 E-value=0.00075 Score=49.65 Aligned_cols=82 Identities=15% Similarity=-0.021 Sum_probs=65.6
Q ss_pred chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHch
Q psy5931 76 KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACR 155 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~ 155 (173)
.+...+.+...|..+.+.|++++|...|..++.++|+.+.+|..-|..+..+- + -..|+.+|-+|+.
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g--~-----------~~~A~~~~~~al~ 83 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMG--Q-----------YDLAIHSYSYGAV 83 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--C-----------HHHHHHHHHHHHH
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHh--h-----------HHHHHHHHHHHHh
Confidence 36678888899999999999999999999999999999999998888776552 1 3569999999998
Q ss_pred hCC-CchhhhhHHHHh
Q psy5931 156 HQK-ESMSRKYLAKVD 170 (173)
Q Consensus 156 ~~~-~~k~Rk~laRiL 170 (173)
... +..+.-.++.++
T Consensus 84 l~p~~~~~~~~lg~~~ 99 (148)
T 2vgx_A 84 MDIXEPRFPFHAAECL 99 (148)
T ss_dssp HSTTCTHHHHHHHHHH
T ss_pred cCCCCchHHHHHHHHH
Confidence 753 344555555554
No 96
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.31 E-value=0.0011 Score=48.59 Aligned_cols=104 Identities=16% Similarity=0.127 Sum_probs=76.2
Q ss_pred HHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHH-HHHhCCc--hHHHHHHHHHHccchhhHHHH
Q psy5931 41 RQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGML-LAQIGRS--AEANKAFSAAVQMHDVMVKAW 117 (173)
Q Consensus 41 rEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~f-l~~Lg~~--deA~~~F~~Avql~~~~~kaW 117 (173)
...+.||+.+ +++.++++..+..--. .+..++.+...|.. +.+.|++ ++|.+.|..++.++|+.+.+|
T Consensus 48 ~~lg~~~~~~------~~~~~A~~~~~~al~~---~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 118 (177)
T 2e2e_A 48 ALLGEYYLWQ------NDYSNSLLAYRQALQL---RGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITAL 118 (177)
T ss_dssp HHHHHHHHHT------TCHHHHHHHHHHHHHH---HCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHc------CCHHHHHHHHHHHHHc---CCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHH
Confidence 4457777774 4555666555443211 22347788999999 7799998 999999999999999999999
Q ss_pred HHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCCchhhhhH
Q psy5931 118 ALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKESMSRKYL 166 (173)
Q Consensus 118 ~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~~k~Rk~l 166 (173)
...|.....+- + -..|+.+|-++.....+...+..+
T Consensus 119 ~~la~~~~~~g--~-----------~~~A~~~~~~al~~~p~~~~~~~~ 154 (177)
T 2e2e_A 119 MLLASDAFMQA--N-----------YAQAIELWQKVMDLNSPRINRTQL 154 (177)
T ss_dssp HHHHHHHHHTT--C-----------HHHHHHHHHHHHHTCCTTSCHHHH
T ss_pred HHHHHHHHHcc--c-----------HHHHHHHHHHHHhhCCCCccHHHH
Confidence 99998876652 1 356999999999886655544443
No 97
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.28 E-value=0.0013 Score=50.18 Aligned_cols=88 Identities=22% Similarity=0.198 Sum_probs=67.2
Q ss_pred hHHHHHHHHhhhccc-cCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCC
Q psy5931 57 NQLQEGLEVIEHTNL-KYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPG 135 (173)
Q Consensus 57 ~el~~gL~vi~~tnl-~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~ 135 (173)
.++.++++..+..-- .-..++..++.+...|..+...|++++|.+.|..|+.++|..+.+|...|..+...-.
T Consensus 19 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~------ 92 (275)
T 1xnf_A 19 LQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN------ 92 (275)
T ss_dssp HHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC------
T ss_pred chHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccC------
Confidence 456666666554322 1134678999999999999999999999999999999999999999999988765421
Q ss_pred CCchhhhHHHHHHHHHHHchhC
Q psy5931 136 SAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 136 ~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
-..|+.+|-+|+...
T Consensus 93 -------~~~A~~~~~~al~~~ 107 (275)
T 1xnf_A 93 -------FDAAYEAFDSVLELD 107 (275)
T ss_dssp -------HHHHHHHHHHHHHHC
T ss_pred -------HHHHHHHHHHHHhcC
Confidence 244666666666653
No 98
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.28 E-value=0.0027 Score=48.93 Aligned_cols=136 Identities=13% Similarity=-0.005 Sum_probs=96.1
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcC-CCCCc-HHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYT-IPSVP-IVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~-lp~i~-v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
...|...-+.|-++-++..+.++.. .|.-+ ..++... .+.||+.+ +++.++++..+..--.+-..+...
T Consensus 8 ~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~---lg~~~~~~------~~~~~A~~~~~~~l~~~P~~~~~~ 78 (225)
T 2yhc_A 8 YATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLD---LIYAYYKN------ADLPLAQAAIDRFIRLNPTHPNID 78 (225)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHH---HHHHHHHT------TCHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHH---HHHHHHhc------CCHHHHHHHHHHHHHHCcCCCcHH
Confidence 3467788888999999999999765 35433 3455544 47899985 568888888777654444445556
Q ss_pred HHHHHHHHHHHH------------------hCCchHHHHHHHHHHccchhhHHHHHHH-----------------HHhHH
Q psy5931 81 EFYALKGMLLAQ------------------IGRSAEANKAFSAAVQMHDVMVKAWALW-----------------GDYME 125 (173)
Q Consensus 81 E~~~LKG~fl~~------------------Lg~~deA~~~F~~Avql~~~~~kaW~~W-----------------G~~~d 125 (173)
+-+..+|..+.+ .|+.++|-+.|..++..+|+.+.+|... |.+..
T Consensus 79 ~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~ 158 (225)
T 2yhc_A 79 YVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYT 158 (225)
T ss_dssp HHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678888988876 5689999999999999999988877432 22222
Q ss_pred hhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCCc
Q psy5931 126 AQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKES 160 (173)
Q Consensus 126 ~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~~ 160 (173)
+. . --..|+.+|-+++..+.+.
T Consensus 159 ~~---~----------~~~~A~~~~~~~l~~~p~~ 180 (225)
T 2yhc_A 159 ER---G----------AWVAVVNRVEGMLRDYPDT 180 (225)
T ss_dssp HH---T----------CHHHHHHHHHHHHHHSTTS
T ss_pred Hc---C----------cHHHHHHHHHHHHHHCcCC
Confidence 21 1 1356888888888876443
No 99
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.28 E-value=0.0012 Score=51.14 Aligned_cols=133 Identities=9% Similarity=-0.017 Sum_probs=91.9
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCC-------CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccC-
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTI-------PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKY- 73 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~l-------p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~- 73 (173)
+..+|.+....|-++.++..+.+...+ ......++ ....+.||..+ +++.++++.++..--.+
T Consensus 30 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~---~~~la~~~~~~------g~~~~A~~~~~~al~~~~ 100 (311)
T 3nf1_A 30 LHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATM---LNILALVYRDQ------NKYKDAANLLNDALAIRE 100 (311)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHH---HHHHHHHHHHT------TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHH---HHHHHHHHHHC------CCHHHHHHHHHHHHHHHH
Confidence 456888999999999999999987664 12222222 34457777774 34444444444322111
Q ss_pred ----CCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccc--------hhhHHHHHHHHHhHHhhcCCCCCCCCCchhh
Q psy5931 74 ----LTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMH--------DVMVKAWALWGDYMEAQFTNPSPPGSAPNMV 141 (173)
Q Consensus 74 ----F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~--------~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~ 141 (173)
-.++..+..+...|.++..+|++++|...|..++.+. +..+.+|...|..+...-.
T Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~------------ 168 (311)
T 3nf1_A 101 KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGK------------ 168 (311)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTC------------
T ss_pred HHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCC------------
Confidence 2357789999999999999999999999999999985 6777888888877665421
Q ss_pred hHHHHHHHHHHHchh
Q psy5931 142 LGVFAVTCFMHACRH 156 (173)
Q Consensus 142 ~~~~Ai~CyLqA~~~ 156 (173)
-..|+.+|-++...
T Consensus 169 -~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 169 -YEEVEYYYQRALEI 182 (311)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHH
Confidence 24566666666654
No 100
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.27 E-value=0.00086 Score=44.56 Aligned_cols=69 Identities=14% Similarity=0.230 Sum_probs=53.8
Q ss_pred HHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH-HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHH
Q psy5931 41 RQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE-FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWA 118 (173)
Q Consensus 41 rEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE-~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~ 118 (173)
.+++.+++.. +++.++++.++..--. .+..++ .+...|..+.++|++++|.+.|..|+.++|+.+.+|.
T Consensus 4 ~~~a~~~~~~------~~~~~A~~~~~~al~~---~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 73 (99)
T 2kc7_A 4 LKTIKELINQ------GDIENALQALEEFLQT---EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQA 73 (99)
T ss_dssp HHHHHHHHHH------TCHHHHHHHHHHHHHH---CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHH
T ss_pred HHHHHHHHHc------CCHHHHHHHHHHHHHH---CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 3567777764 4677777766654321 233456 8999999999999999999999999999999999883
No 101
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.25 E-value=0.0025 Score=48.20 Aligned_cols=134 Identities=11% Similarity=0.011 Sum_probs=93.0
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCC------CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhcccc---
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTI------PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLK--- 72 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~l------p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~--- 72 (173)
...+|.+-...|-++-++..+.+...+ ++-+ +...-....+.||... +++.++++.++..--.
T Consensus 46 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~--~~~~~~~~l~~~~~~~------g~~~~A~~~~~~al~~~~~ 117 (283)
T 3edt_B 46 LNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHP--AVAATLNNLAVLYGKR------GKYKEAEPLCKRALEIREK 117 (283)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCH--HHHHHHHHHHHHHHTT------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcch--HHHHHHHHHHHHHHHh------ccHHHHHHHHHHHHHHHHH
Confidence 356788888999999999999887654 2211 1222234456777764 3344444443332110
Q ss_pred --CCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHcc--------chhhHHHHHHHHHhHHhhcCCCCCCCCCchhhh
Q psy5931 73 --YLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQM--------HDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVL 142 (173)
Q Consensus 73 --~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql--------~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~ 142 (173)
.-..+..++.+...|.++..+|++++|...|..++.+ +|..+.+|...|..+..+-.
T Consensus 118 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~------------- 184 (283)
T 3edt_B 118 VLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGK------------- 184 (283)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTC-------------
T ss_pred HcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCC-------------
Confidence 0124678999999999999999999999999999999 88888999999988877642
Q ss_pred HHHHHHHHHHHchh
Q psy5931 143 GVFAVTCFMHACRH 156 (173)
Q Consensus 143 ~~~Ai~CyLqA~~~ 156 (173)
-..|+.+|-++...
T Consensus 185 ~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 185 YQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 24566677666654
No 102
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.24 E-value=0.00076 Score=46.80 Aligned_cols=82 Identities=12% Similarity=0.018 Sum_probs=64.4
Q ss_pred chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHch
Q psy5931 76 KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACR 155 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~ 155 (173)
.+..++.+...|..+.+.|++++|...|..|+.++|+.+.+|..-|..+..+-. -..|+.+|-+|++
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~-------------~~~A~~~~~~al~ 71 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQ-------------PEQALADCRRALE 71 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcC-------------HHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999999999988766531 2468888888888
Q ss_pred hCC-CchhhhhHHHHh
Q psy5931 156 HQK-ESMSRKYLAKVD 170 (173)
Q Consensus 156 ~~~-~~k~Rk~laRiL 170 (173)
.+. +..+.-.++.++
T Consensus 72 ~~p~~~~~~~~l~~~~ 87 (137)
T 3q49_B 72 LDGQSVKAHFFLGQCQ 87 (137)
T ss_dssp HCTTCHHHHHHHHHHH
T ss_pred hCchhHHHHHHHHHHH
Confidence 643 234444455443
No 103
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.22 E-value=0.0007 Score=46.52 Aligned_cols=67 Identities=15% Similarity=0.071 Sum_probs=57.2
Q ss_pred hhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 78 MTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 78 qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
..+..+...|..+.+.|++++|.+.|..|+.++|..+.+|...|..+..+-. -..|+.+|-+|+...
T Consensus 17 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~-------------~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 17 DNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGD-------------RAGARQAWESGLAAA 83 (115)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC-------------HHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCC-------------HHHHHHHHHHHHHhc
Confidence 3467899999999999999999999999999999999999999998877631 345888888887653
No 104
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=97.22 E-value=0.0026 Score=55.35 Aligned_cols=118 Identities=10% Similarity=0.004 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHhhhhccC-ChhHHHHHHHHhhhccccCCC-------chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHc
Q psy5931 37 FEKIRQQVKCYLQMAALD-GKNQLQEGLEVIEHTNLKYLT-------KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQ 108 (173)
Q Consensus 37 F~KlrEq~kc~l~~~~~~-~~~el~~gL~vi~~tnl~~F~-------~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avq 108 (173)
-...++.+.+|+...... .-..|..++++..+.. .|. .+.++..+...|..+.++|++++|...|..|+.
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~--~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEY--GLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCC--SCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccc--cCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 345667777777641100 0112444454433321 122 234478999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC-CchhhhhHHHH
Q psy5931 109 MHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK-ESMSRKYLAKV 169 (173)
Q Consensus 109 l~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~-~~k~Rk~laRi 169 (173)
++|+.+++|..-|..+..+- + -..|+.+|-+|+.++. +..++..++++
T Consensus 346 ~~p~~~~a~~~~g~a~~~~g--~-----------~~~A~~~~~~al~l~P~~~~a~~~l~~~ 394 (457)
T 1kt0_A 346 LDSANEKGLYRRGEAQLLMN--E-----------FESAKGDFEKVLEVNPQNKAARLQISMC 394 (457)
T ss_dssp HSTTCHHHHHHHHHHHHHTT--C-----------HHHHHHHHHHHHTTC----CHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHHcc--C-----------HHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 99999999999998877663 1 3569999999998753 34455555554
No 105
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.21 E-value=0.0051 Score=49.18 Aligned_cols=153 Identities=10% Similarity=0.029 Sum_probs=100.1
Q ss_pred HHHHHHhCCChHHHHHHHHhhcCC--CCCcHHHHHHHHHHHHHHHhhhhccCC-hhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 5 FGKIARKHHLTSVCLDSLFRLYTI--PSVPIVDCFEKIRQQVKCYLQMAALDG-KNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 5 fa~iARkh~l~~vc~~~L~ki~~l--p~i~v~daF~KlrEq~kc~l~~~~~~~-~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
++.+-...|-++.++..+.+...+ +.-+......-+..-+.||..+..... -.-+..+|++++...- .++..+.
T Consensus 121 l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~---~~~~~~~ 197 (293)
T 3u3w_A 121 VAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD---NEEFDVK 197 (293)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSC---CHHHHHH
T ss_pred HHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccc---chhHHHH
Confidence 455555667778888888887653 111111001112333556655421100 1116667777666532 5778899
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhh------HHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHch
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVM------VKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACR 155 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~------~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~ 155 (173)
++..-|.++.++|++++|.+.|..|+.+.+.. +.+|..-|.....+-.. -..|+.+|-+|..
T Consensus 198 ~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~------------~~~A~~~~~~Al~ 265 (293)
T 3u3w_A 198 VRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYE------------EAEIEDAYKKASF 265 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCC------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCc------------HHHHHHHHHHHHH
Confidence 99999999999999999999999999998654 78888888887776421 2458889988887
Q ss_pred hCCCchhhhhHHHHhhc
Q psy5931 156 HQKESMSRKYLAKVDYI 172 (173)
Q Consensus 156 ~~~~~k~Rk~laRiLWL 172 (173)
.....+...++..++++
T Consensus 266 i~~~~~~~~~~~~l~~~ 282 (293)
T 3u3w_A 266 FFDILEMHAYKEALVNK 282 (293)
T ss_dssp HHHHTTCTGGGGGGTTC
T ss_pred HHHHhCCHHHHHHHHHH
Confidence 65555555566665543
No 106
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.19 E-value=0.0016 Score=54.25 Aligned_cols=116 Identities=9% Similarity=0.014 Sum_probs=85.8
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcC-CCCCc---------HHHH-HHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccc
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYT-IPSVP---------IVDC-FEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNL 71 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~-lp~i~---------v~da-F~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl 71 (173)
...|.+..+.|-++-++..+.+... .|+-+ +... ..-....+.||+.+ +++.++++.++..--
T Consensus 151 ~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~------g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 151 KERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKL------QAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHT------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHc------CCHHHHHHHHHHHHH
Confidence 4578888889999999999988655 34432 0000 12223457788875 456677766655432
Q ss_pred cCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 72 KYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 72 ~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
. .+..++.+..+|..+..+|++++|...|..|++++|+.+.+|...|.....+
T Consensus 225 ~---~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~ 277 (336)
T 1p5q_A 225 L---DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRI 277 (336)
T ss_dssp H---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHH
T ss_pred h---CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 1 3456789999999999999999999999999999999999998888777665
No 107
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=97.16 E-value=0.00065 Score=48.63 Aligned_cols=68 Identities=9% Similarity=-0.103 Sum_probs=58.1
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
...|.-+.-.|..+.+.|++++|-+.|..|+.++|+.+.+|..-|..+..+-. -..|+.+|-+|+..
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~-------------~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKK-------------FAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhh-------------HHHHHHHHHHHHHh
Confidence 45677778889999999999999999999999999999999999988776631 35688999999876
Q ss_pred C
Q psy5931 157 Q 157 (173)
Q Consensus 157 ~ 157 (173)
.
T Consensus 72 ~ 72 (127)
T 4gcn_A 72 G 72 (127)
T ss_dssp H
T ss_pred C
Confidence 4
No 108
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.14 E-value=0.001 Score=53.79 Aligned_cols=97 Identities=12% Similarity=0.113 Sum_probs=75.1
Q ss_pred HHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHH
Q psy5931 39 KIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWA 118 (173)
Q Consensus 39 KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~ 118 (173)
.+.+.+.+++.. +++.++++..+..-- ..+..++++...|..+.++|++++|.+.|..|++++|+.+++|.
T Consensus 6 ~~~~~g~~~~~~------g~~~~A~~~~~~al~---~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 76 (281)
T 2c2l_A 6 ELKEQGNRLFVG------RKYPEAAACYGRAIT---RNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHF 76 (281)
T ss_dssp HHHHHHHHHHHT------TCHHHHHHHHHHHHH---HCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHH
T ss_pred HHHHHHHHHHHc------CCHHHHHHHHHHHHH---hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 456677777774 456666666654322 13456899999999999999999999999999999999999999
Q ss_pred HHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 119 LWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 119 ~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
.-|..+..+-. -..|+..|-+|....
T Consensus 77 ~lg~~~~~~g~-------------~~~A~~~~~~al~l~ 102 (281)
T 2c2l_A 77 FLGQCQLEMES-------------YDEAIANLQRAYSLA 102 (281)
T ss_dssp HHHHHHHHTTC-------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC-------------HHHHHHHHHHHHHhC
Confidence 99988876631 356888888887764
No 109
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.14 E-value=0.001 Score=47.28 Aligned_cols=76 Identities=22% Similarity=0.172 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC-C
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK-E 159 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~-~ 159 (173)
+-+..+|..+.+.|++++|...|..|++++|+.+.+|..-|..+..+- + -..|+.+|-+|+..+. +
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g--~-----------~~~A~~~~~~al~l~P~~ 84 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENE--K-----------DGLAIIALNHARMLDPKD 84 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTT--C-----------HHHHHHHHHHHHHHCTTC
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcC--C-----------HHHHHHHHHHHHHhCCCC
Confidence 346778999999999999999999999999999999999999887653 1 3569999999998853 2
Q ss_pred chhhhhHHHH
Q psy5931 160 SMSRKYLAKV 169 (173)
Q Consensus 160 ~k~Rk~laRi 169 (173)
..++-.++.+
T Consensus 85 ~~~~~~la~~ 94 (121)
T 1hxi_A 85 IAVHAALAVS 94 (121)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3344444444
No 110
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=97.12 E-value=0.0056 Score=52.21 Aligned_cols=117 Identities=8% Similarity=-0.012 Sum_probs=85.4
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCC-CCCc----------HH-HHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhc
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTI-PSVP----------IV-DCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHT 69 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~----------v~-daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~t 69 (173)
+...|....+.|-++-++..+.+...+ |..+ .. +-..-....+.||+.+ +++.++++.++..
T Consensus 226 ~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~------g~~~~A~~~~~~a 299 (370)
T 1ihg_A 226 LKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKM------SDWQGAVDSCLEA 299 (370)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHT------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhc------cCHHHHHHHHHHH
Confidence 356788888999999999998886541 1100 11 1112234457788875 4577777766654
Q ss_pred cccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 70 NLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 70 nl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
-- ..+..++.+..+|..+..+|++++|.+.|..|++++|+.+.+|...+.....+
T Consensus 300 l~---~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~ 354 (370)
T 1ihg_A 300 LE---IDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKI 354 (370)
T ss_dssp HT---TCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HH---hCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 33 23567899999999999999999999999999999999999988777766554
No 111
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.12 E-value=0.0022 Score=48.53 Aligned_cols=121 Identities=13% Similarity=0.069 Sum_probs=81.0
Q ss_pred ChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccC-----CCchhhHHHHHHHHH
Q psy5931 14 LTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKY-----LTKEMTAEFYALKGM 88 (173)
Q Consensus 14 l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~-----F~~~qkaE~~~LKG~ 88 (173)
+.+-++..+.++.+.......++ +...+.||+.+ +++.++++.++..--.+ -.++..+..+...|.
T Consensus 23 ~~~~al~~~~~~~~~~~~~~~~~---~~~l~~~~~~~------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~ 93 (283)
T 3edt_B 23 LCKQALEDLEKTSGHDHPDVATM---LNILALVYRDQ------NKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAV 93 (283)
T ss_dssp HHHHHHHHHHHHHCSSSHHHHHH---HHHHHHHHHHT------TCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCHHHHHH---HHHHHHHHHHc------ccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHH
Confidence 45567777777765332223333 34567788774 34444444444322110 235678899999999
Q ss_pred HHHHhCCchHHHHHHHHHHcc--------chhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 89 LLAQIGRSAEANKAFSAAVQM--------HDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 89 fl~~Lg~~deA~~~F~~Avql--------~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
++..+|++++|...|..|+.+ +|..+.+|...|..+..+-. -..|+.+|-+|+..
T Consensus 94 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------~~~A~~~~~~al~~ 156 (283)
T 3edt_B 94 LYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGK-------------AEEVEYYYRRALEI 156 (283)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTC-------------HHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCC-------------HHHHHHHHHHHHHH
Confidence 999999999999999999999 58888999999888765531 24466666666654
No 112
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.11 E-value=0.0027 Score=43.37 Aligned_cols=80 Identities=10% Similarity=-0.046 Sum_probs=62.4
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
+..++.+...|..+.++|++++|...|..|+.++|+.+.+|..-|..+..+-. -..|+.+|-+|+..
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~-------------~~~A~~~~~~al~l 70 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDR-------------TDDAIDTYAQGIEV 70 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC-------------HHHHHHHHHHHHhh
Confidence 45678899999999999999999999999999999999999999988776631 35688888888865
Q ss_pred C---CCchhhhhHHHH
Q psy5931 157 Q---KESMSRKYLAKV 169 (173)
Q Consensus 157 ~---~~~k~Rk~laRi 169 (173)
. ++....+.+..+
T Consensus 71 ~~~~~~~~~~~~l~~~ 86 (100)
T 3ma5_A 71 AREEGTQKDLSELQDA 86 (100)
T ss_dssp HHHHSCHHHHHHHHHH
T ss_pred hhcCCchhHHHHHHHH
Confidence 3 333444444433
No 113
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.10 E-value=0.00036 Score=45.92 Aligned_cols=80 Identities=21% Similarity=0.222 Sum_probs=61.2
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
+..++.+...|..+.+.|++++|...|..++.++|..+.+|...|..+..+- + -..|+.+|-+++..
T Consensus 3 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~--~-----------~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 3 DQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLE--R-----------YEEAVDCYNYVINV 69 (112)
T ss_dssp CSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTT--C-----------HHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcc--C-----------HHHHHHHHHHHHHh
Confidence 3445677889999999999999999999999999999999999888876553 1 35688888888877
Q ss_pred CCC---chhhhhHHHH
Q psy5931 157 QKE---SMSRKYLAKV 169 (173)
Q Consensus 157 ~~~---~k~Rk~laRi 169 (173)
..+ ..+...++.+
T Consensus 70 ~~~~~~~~~~~~l~~~ 85 (112)
T 2kck_A 70 IEDEYNKDVWAAKADA 85 (112)
T ss_dssp SCCTTCHHHHHHHHHH
T ss_pred CcccchHHHHHHHHHH
Confidence 433 3444444444
No 114
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.10 E-value=0.002 Score=54.27 Aligned_cols=111 Identities=10% Similarity=-0.013 Sum_probs=76.4
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEF 82 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~ 82 (173)
...|.+....|-++-++..+.+...+.. . .+++. ..+.+|... +++.++++.++..--. .+..++.
T Consensus 247 ~~~g~~~~~~~~~~~A~~~~~~~~~~~~-~-~~~~~---~l~~~~~~~------~~~~~A~~~~~~~~~~---~~~~~~~ 312 (537)
T 3fp2_A 247 CYTGIFHFLKNNLLDAQVLLQESINLHP-T-PNSYI---FLALTLADK------ENSQEFFKFFQKAVDL---NPEYPPT 312 (537)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCC-C-HHHHH---HHHHHTCCS------SCCHHHHHHHHHHHHH---CTTCHHH
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHhcCC-C-chHHH---HHHHHHHHh------cCHHHHHHHHHHHhcc---CCCCHHH
Confidence 3456777778888888888888766421 1 33333 346666653 3455566555543221 2345677
Q ss_pred HHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 83 YALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 83 ~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
+...|.++.++|++++|.+.|..++.++|..+.+|...|..+...
T Consensus 313 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~ 357 (537)
T 3fp2_A 313 YYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQ 357 (537)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 888888888888888898888888888888888888888777655
No 115
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.10 E-value=0.0068 Score=48.89 Aligned_cols=27 Identities=11% Similarity=0.089 Sum_probs=18.8
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCC
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIP 29 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp 29 (173)
+.+|.+-.++|-++-+...+.+.-.++
T Consensus 103 ~~~~~~~~~~~~~~~A~~~~~~al~~~ 129 (308)
T 2ond_A 103 FAYADYEESRMKYEKVHSIYNRLLAIE 129 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhcc
Confidence 356666677777777777777776654
No 116
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.09 E-value=0.0026 Score=49.55 Aligned_cols=84 Identities=15% Similarity=0.126 Sum_probs=56.8
Q ss_pred hHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCC
Q psy5931 57 NQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGS 136 (173)
Q Consensus 57 ~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~ 136 (173)
+++.++++.++..--. .+...+.+...|.++.++|++++|.+.|..+++++|+.+.+|..-|..+...- +
T Consensus 152 ~~~~~A~~~~~~~~~~---~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~----- 221 (327)
T 3cv0_A 152 NEYRECRTLLHAALEM---NPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGN--R----- 221 (327)
T ss_dssp HHHHHHHHHHHHHHHH---STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--C-----
T ss_pred ccHHHHHHHHHHHHhh---CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC--C-----
Confidence 4455666555543221 12356788888888888888888888888888888888888887777766542 1
Q ss_pred CchhhhHHHHHHHHHHHchh
Q psy5931 137 APNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 137 ~~~~~~~~~Ai~CyLqA~~~ 156 (173)
-..|+.+|-++...
T Consensus 222 ------~~~A~~~~~~a~~~ 235 (327)
T 3cv0_A 222 ------PQEALDAYNRALDI 235 (327)
T ss_dssp ------HHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHc
Confidence 23456666666554
No 117
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=97.09 E-value=0.0033 Score=54.77 Aligned_cols=116 Identities=9% Similarity=0.032 Sum_probs=81.7
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcC-CCCCc---------HHHH-HHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccc
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYT-IPSVP---------IVDC-FEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNL 71 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~-lp~i~---------v~da-F~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl 71 (173)
...|.+..+.|-++-|+..+.+... .|+-+ +.+. ..-....+.||+.+ .++.++++.++..--
T Consensus 272 ~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~------g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 272 KEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKL------REYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHT------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHh
Confidence 4578888999999999999998655 34432 0000 11223457788875 467777776665433
Q ss_pred cCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 72 KYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 72 ~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
..+..++.+..+|..+..+|++++|...|..|++++|+.+.+|..-|.....+
T Consensus 346 ---~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~ 398 (457)
T 1kt0_A 346 ---LDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKA 398 (457)
T ss_dssp ---HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHH
T ss_pred ---cCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 13456888999999999999999999999999999999998888887766544
No 118
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.08 E-value=0.0059 Score=49.77 Aligned_cols=113 Identities=13% Similarity=0.044 Sum_probs=74.5
Q ss_pred HHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHH
Q psy5931 4 QFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEF 82 (173)
Q Consensus 4 ~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~ 82 (173)
..|.+..+.|-++-++..+.++..+ |. . ... ..+.++..+.. +.+++.+++.+++..--. .+..+.+
T Consensus 135 ~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~---~~~---~l~~a~~~l~~--~~~~~~eA~~~~~~~l~~---~p~~~~~ 202 (291)
T 3mkr_A 135 MTVQILLKLDRLDLARKELKKMQDQDED-A---TLT---QLATAWVSLAA--GGEKLQDAYYIFQEMADK---CSPTLLL 202 (291)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT-C---HHH---HHHHHHHHHHH--CTTHHHHHHHHHHHHHHH---SCCCHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhCcC-c---HHH---HHHHHHHHHHh--CchHHHHHHHHHHHHHHh---CCCcHHH
Confidence 4455556666666666666665432 21 1 000 11122222111 124567777766654332 2346889
Q ss_pred HHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhc
Q psy5931 83 YALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQF 128 (173)
Q Consensus 83 ~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f 128 (173)
+...|..+.++|++++|...|..|+.++|+.+.+|..-|..+..+.
T Consensus 203 ~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g 248 (291)
T 3mkr_A 203 LNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLG 248 (291)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999998877754
No 119
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.07 E-value=0.0019 Score=50.25 Aligned_cols=87 Identities=16% Similarity=0.088 Sum_probs=66.7
Q ss_pred hHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCC
Q psy5931 57 NQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGS 136 (173)
Q Consensus 57 ~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~ 136 (173)
+++.++++.++..-- ..+..++.+...|.++.+.|++++|.+.|..+++++|..+.+|...|..+..+- +
T Consensus 186 ~~~~~A~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g--~----- 255 (327)
T 3cv0_A 186 NNYDSAAANLRRAVE---LRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMS--Q----- 255 (327)
T ss_dssp TCHHHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--C-----
T ss_pred ccHHHHHHHHHHHHH---hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhc--c-----
Confidence 446666666654322 124557899999999999999999999999999999999999999988876652 1
Q ss_pred CchhhhHHHHHHHHHHHchhCCC
Q psy5931 137 APNMVLGVFAVTCFMHACRHQKE 159 (173)
Q Consensus 137 ~~~~~~~~~Ai~CyLqA~~~~~~ 159 (173)
-..|+.+|-+++....+
T Consensus 256 ------~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 256 ------YDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp ------HHHHHHHHHHHHHHHTT
T ss_pred ------HHHHHHHHHHHHHhCCc
Confidence 35678888888776443
No 120
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.07 E-value=0.0073 Score=40.39 Aligned_cols=113 Identities=14% Similarity=0.094 Sum_probs=78.5
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhcccc----CCCc
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLK----YLTK 76 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~----~F~~ 76 (173)
...+|.+....|-++.++..+.+...+ |.- .++ ....+.||+.+ +++.++++.++..--. --..
T Consensus 7 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~---~~~la~~~~~~------~~~~~A~~~~~~~~~~~~~~~~~~ 75 (131)
T 1elr_A 7 EKELGNDAYKKKDFDTALKHYDKAKELDPTN--MTY---ITNQAAVYFEK------GDYNKCRELCEKAIEVGRENREDY 75 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHH---HHHHHHHHHHH------TCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc--HHH---HHHHHHHHHHh------ccHHHHHHHHHHHHhhccccchhH
Confidence 456788999999999999999997654 322 222 34457788775 3455555544432110 0112
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHh
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEA 126 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~ 126 (173)
...++.+...|..+.++|++++|.+.|..++.+.|+ +..+..-+.....
T Consensus 76 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~ 124 (131)
T 1elr_A 76 RQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT-PDVLKKCQQAEKI 124 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHH
Confidence 233889999999999999999999999999999985 7777666655443
No 121
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.04 E-value=0.0091 Score=44.08 Aligned_cols=141 Identities=12% Similarity=0.074 Sum_probs=97.5
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
....|.+....|-++-++..+.+...+ |+- .++ ....+.+|++. +++.++++.++..--.. + .+
T Consensus 9 ~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~--~~a---~~~la~~~~~~------g~~~~A~~~~~~a~~~~---p-~~ 73 (176)
T 2r5s_A 9 LLKQVSELLQQGEHAQALNVIQTLSDELQSR--GDV---KLAKADCLLET------KQFELAQELLATIPLEY---Q-DN 73 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCHHHHTS--HHH---HHHHHHHHHHT------TCHHHHHHHHTTCCGGG---C-CH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCc--HHH---HHHHHHHHHHC------CCHHHHHHHHHHhhhcc---C-Ch
Confidence 356677888888899999988886432 221 122 34457788774 57888888888763321 1 34
Q ss_pred HHHHHHHHH-HHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCC
Q psy5931 81 EFYALKGML-LAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKE 159 (173)
Q Consensus 81 E~~~LKG~f-l~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~ 159 (173)
+...+.|.+ +...++.++|-+.|..|+.++|+.+.+|...|..+...-. -..|+.+|-++++...+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~-------------~~~A~~~~~~~l~~~p~ 140 (176)
T 2r5s_A 74 SYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGR-------------DEEALELLWNILKVNLG 140 (176)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHccc-------------HHHHHHHHHHHHHhCcc
Confidence 566666654 3344455678999999999999999999999998876531 35688888888887532
Q ss_pred ---chhhhhHHHHh
Q psy5931 160 ---SMSRKYLAKVD 170 (173)
Q Consensus 160 ---~k~Rk~laRiL 170 (173)
..++..++.++
T Consensus 141 ~~~~~a~~~l~~~~ 154 (176)
T 2r5s_A 141 AQDGEVKKTFMDIL 154 (176)
T ss_dssp TTTTHHHHHHHHHH
T ss_pred cChHHHHHHHHHHH
Confidence 34677777665
No 122
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.01 E-value=0.0078 Score=46.40 Aligned_cols=134 Identities=11% Similarity=0.019 Sum_probs=91.4
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCC------CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccC--
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTI------PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKY-- 73 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~l------p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~-- 73 (173)
...+|.+....|-++-++..+.+...+ ++-+ +...-....+.||..+ +++.++++.++..--.+
T Consensus 72 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~--~~~~~~~~l~~~~~~~------g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 72 LNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHP--AVAATLNNLAVLYGKR------GKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHHHTT------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHHHHHc------CcHHHHHHHHHHHHHHHHH
Confidence 356788888889999898888886544 2211 1122233446677764 34444544444321111
Q ss_pred ---CCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHcc--------chhhHHHHHHHHHhHHhhcCCCCCCCCCchhhh
Q psy5931 74 ---LTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQM--------HDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVL 142 (173)
Q Consensus 74 ---F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql--------~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~ 142 (173)
-.++..+..+...|.++..+|++++|...|..++.+ ++..+.+|...|..+..+-.
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~------------- 210 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGK------------- 210 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTC-------------
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCC-------------
Confidence 234678899999999999999999999999999999 88888999999988877642
Q ss_pred HHHHHHHHHHHchh
Q psy5931 143 GVFAVTCFMHACRH 156 (173)
Q Consensus 143 ~~~Ai~CyLqA~~~ 156 (173)
-..|+.+|-++...
T Consensus 211 ~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 211 FKQAETLYKEILTR 224 (311)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 23466666666643
No 123
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=96.99 E-value=0.0039 Score=50.05 Aligned_cols=137 Identities=8% Similarity=-0.057 Sum_probs=90.2
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCc-HHHHHHHHHHHHHHHhhhhccCC-hhHHHHHHHHhhhccccCCCchhh
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVP-IVDCFEKIRQQVKCYLQMAALDG-KNQLQEGLEVIEHTNLKYLTKEMT 79 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~-v~daF~KlrEq~kc~l~~~~~~~-~~el~~gL~vi~~tnl~~F~~~qk 79 (173)
+.+|.+....|-++-++..+.+...+ |..+ ......-....+.+|+.+..... ..-+.+++++....+ .+...
T Consensus 191 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~----~~~~~ 266 (406)
T 3sf4_A 191 GNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK----DRAVE 266 (406)
T ss_dssp HHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT----CHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCc----CchHH
Confidence 46778888888888888888875432 1111 11222234445677776521110 111555555555443 35667
Q ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHccchhh------HHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHH
Q psy5931 80 AEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVM------VKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHA 153 (173)
Q Consensus 80 aE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~------~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA 153 (173)
+..+...|.++.++|++++|.+.|..|+.+.+.. +.+|...|..+..+-. -..|+.+|-+|
T Consensus 267 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------~~~A~~~~~~a 333 (406)
T 3sf4_A 267 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGN-------------HDQAMHFAEKH 333 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC-------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCC-------------HHHHHHHHHHH
Confidence 8999999999999999999999999999986654 6778777877766531 24577777776
Q ss_pred chh
Q psy5931 154 CRH 156 (173)
Q Consensus 154 ~~~ 156 (173)
...
T Consensus 334 l~~ 336 (406)
T 3sf4_A 334 LEI 336 (406)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 124
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=96.95 E-value=0.00081 Score=52.76 Aligned_cols=81 Identities=16% Similarity=0.055 Sum_probs=64.2
Q ss_pred chhhHHHHHHHHHHHHHhCCc----------hHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHH
Q psy5931 76 KEMTAEFYALKGMLLAQIGRS----------AEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVF 145 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~----------deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~ 145 (173)
.+..++.+...|..+..+|++ ++|-..|..|+.++|+.+.+|...|.-+.++-.-.| .......--..
T Consensus 32 ~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P--~~~~a~g~~~e 109 (158)
T 1zu2_A 32 NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTP--DETEAKHNFDL 109 (158)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCC--CHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCc--chhhhhccHHH
Confidence 566889999999999999886 599999999999999999999999999886532222 11112234567
Q ss_pred HHHHHHHHchhCC
Q psy5931 146 AVTCFMHACRHQK 158 (173)
Q Consensus 146 Ai~CyLqA~~~~~ 158 (173)
|+.||-+|+..+.
T Consensus 110 A~~~~~kAl~l~P 122 (158)
T 1zu2_A 110 ATQFFQQAVDEQP 122 (158)
T ss_dssp HHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhCC
Confidence 9999999999853
No 125
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=96.94 E-value=0.00073 Score=53.01 Aligned_cols=65 Identities=12% Similarity=0.021 Sum_probs=51.1
Q ss_pred HHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 90 LAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 90 l~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
..+++++++|-+.|..|+++.|+.+.+|..||.-+-.+-.-++. ...+.....|+.||-+|++++
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g---~~al~~~~eAi~~le~AL~ld 76 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSI---SDAKQMIQEAITKFEEALLID 76 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCH---HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchh---hhhHhHHHHHHHHHHHHHHhC
Confidence 35677889999999999999999999999999987766321110 023445679999999999994
No 126
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=96.94 E-value=0.01 Score=48.32 Aligned_cols=98 Identities=14% Similarity=0.178 Sum_probs=66.8
Q ss_pred HHHHHHHhCCChHHHHHHHHhhcCC---CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhH
Q psy5931 4 QFGKIARKHHLTSVCLDSLFRLYTI---PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 4 ~fa~iARkh~l~~vc~~~L~ki~~l---p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
.+|..-...|-.+.++..|.++... |+-+ ++ .-..+.++.+ .+++.++++.++. +...
T Consensus 70 ~la~~~~~~~~~~~A~~~l~~ll~~~~~P~~~--~~---~~~la~~~~~------~g~~~~Al~~l~~--------~~~~ 130 (291)
T 3mkr_A 70 MFAEYLASHSRRDAIVAELDREMSRSVDVTNT--TF---LLMAASIYFY------DQNPDAALRTLHQ--------GDSL 130 (291)
T ss_dssp HHHHHHHCSTTHHHHHHHHHHHHHSCCCCSCH--HH---HHHHHHHHHH------TTCHHHHHHHHTT--------CCSH
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHhcccCCCCH--HH---HHHHHHHHHH------CCCHHHHHHHHhC--------CCCH
Confidence 3444455555666666666665322 3321 12 1222445554 3567888888876 4667
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccchhhH-----HHHHHH
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMV-----KAWALW 120 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~-----kaW~~W 120 (173)
+.+..+|.++.++|+.|+|.+.|..++.++|... .+|..+
T Consensus 131 ~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l 175 (291)
T 3mkr_A 131 ECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSL 175 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHH
Confidence 8999999999999999999999999999998643 667666
No 127
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=96.92 E-value=0.0084 Score=43.77 Aligned_cols=154 Identities=10% Similarity=-0.016 Sum_probs=98.1
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCC---CCcHHHHHHHHHHHHHHHhhhhccCC-hhHHHHHHHHhhhccccCCCch
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIP---SVPIVDCFEKIRQQVKCYLQMAALDG-KNQLQEGLEVIEHTNLKYLTKE 77 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp---~i~v~daF~KlrEq~kc~l~~~~~~~-~~el~~gL~vi~~tnl~~F~~~ 77 (173)
.+.+|.+....|-++-++..+.+...+- ..+... ..-....+.+|+.+..... ..-+.+++++.....- .+.
T Consensus 29 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---~~~ 104 (203)
T 3gw4_A 29 RFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAE-HRALHQVGMVERMAGNWDAARRCFLEERELLASLPE---DPL 104 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC---CHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCc---cHH
Confidence 3567788888888888888888754411 011111 1223445666666421110 1115666666554331 234
Q ss_pred hhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhH------HHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHH
Q psy5931 78 MTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMV------KAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFM 151 (173)
Q Consensus 78 qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~------kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyL 151 (173)
..+..+...|..+..+|++++|...|..|+.+.+... .++..-|......- + -..|+.+|-
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g--~-----------~~~A~~~~~ 171 (203)
T 3gw4_A 105 AASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEK--N-----------LLEAQQHWL 171 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--C-----------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCc--C-----------HHHHHHHHH
Confidence 7788999999999999999999999999998765432 22334444333331 1 356899999
Q ss_pred HHchhCCCchhhhhHHHHhhc
Q psy5931 152 HACRHQKESMSRKYLAKVDYI 172 (173)
Q Consensus 152 qA~~~~~~~k~Rk~laRiLWL 172 (173)
+|.........+..++++++.
T Consensus 172 ~al~~~~~~~~~~~~~~~~~~ 192 (203)
T 3gw4_A 172 RARDIFAELEDSEAVNELMTR 192 (203)
T ss_dssp HHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHhc
Confidence 999887777778888888753
No 128
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=96.90 E-value=0.0064 Score=48.50 Aligned_cols=113 Identities=12% Similarity=0.042 Sum_probs=85.8
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
..+|.+..+.|-++-++..+.+...+ |.. .++ ....+.||... +++.++++.++..-- ..+...+
T Consensus 221 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~---~~~l~~~~~~~------g~~~~A~~~~~~al~---~~~~~~~ 286 (368)
T 1fch_A 221 CGLGVLFNLSGEYDKAVDCFTAALSVRPND--YLL---WNKLGATLANG------NQSEEAVAAYRRALE---LQPGYIR 286 (368)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--HHH---HHHHHHHHHHT------TCHHHHHHHHHHHHH---HCTTCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCcCC--HHH---HHHHHHHHHHc------CCHHHHHHHHHHHHH---hCCCcHH
Confidence 56788889999999999999986653 322 223 33457778774 456666666554321 1345678
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhh-----------HHHHHHHHHhHHhhcC
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVM-----------VKAWALWGDYMEAQFT 129 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~-----------~kaW~~WG~~~d~~f~ 129 (173)
.+...|.++.++|++++|...|..|+.+.|+. +.+|..-|..+..+-.
T Consensus 287 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 345 (368)
T 1fch_A 287 SRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQ 345 (368)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999988 8899988888887753
No 129
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.87 E-value=0.0068 Score=48.92 Aligned_cols=132 Identities=8% Similarity=-0.032 Sum_probs=88.4
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
.+.++.+.+++|-.+-+...+.+.-.++... .++++. .+...+.. .+++.++..+.+..-- . .+..++
T Consensus 137 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~-~~~~~~---~a~~~~~~-----~~~~~~A~~~~~~al~-~--~p~~~~ 204 (308)
T 2ond_A 137 YIQYMKFARRAEGIKSGRMIFKKAREDARTR-HHVYVT---AALMEYYC-----SKDKSVAFKIFELGLK-K--YGDIPE 204 (308)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHTSTTCC-THHHHH---HHHHHHHT-----SCCHHHHHHHHHHHHH-H--HTTCHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-HHHHHH---HHHHHHHH-----cCCHHHHHHHHHHHHH-h--CCCcHH
Confidence 3567888888888899999999977764322 344432 12222111 1223333333332211 1 134579
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHcc---ch-hhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQM---HD-VMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql---~~-~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
++...|.++.++|+.++|-..|..|+.. .| +....|..|+.+..+... ...|...|-+|....
T Consensus 205 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~-------------~~~a~~~~~~a~~~~ 271 (308)
T 2ond_A 205 YVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD-------------LASILKVEKRRFTAF 271 (308)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSC-------------HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCC-------------HHHHHHHHHHHHHHc
Confidence 9999999999999999999999999995 55 478999999999877631 245677788887764
Q ss_pred C
Q psy5931 158 K 158 (173)
Q Consensus 158 ~ 158 (173)
.
T Consensus 272 p 272 (308)
T 2ond_A 272 R 272 (308)
T ss_dssp T
T ss_pred c
Confidence 3
No 130
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=96.86 E-value=0.016 Score=49.72 Aligned_cols=127 Identities=12% Similarity=-0.005 Sum_probs=78.4
Q ss_pred HHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHH
Q psy5931 4 QFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFY 83 (173)
Q Consensus 4 ~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~ 83 (173)
.++.+..+.|-++-++..+.++..+.. .-.+++ ...+.+|.+. +++.+++++++..-- . .+...+.+
T Consensus 378 ~l~~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~---~~l~~~~~~~------g~~~~A~~~~~~~~~-~--~~~~~~~~ 444 (597)
T 2xpi_A 378 AVGIYYLCVNKISEARRYFSKSSTMDP-QFGPAW---IGFAHSFAIE------GEHDQAISAYTTAAR-L--FQGTHLPY 444 (597)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHH---HHHHHHHHHH------TCHHHHHHHHHHHHH-T--TTTCSHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCC-CCHHHH---HHHHHHHHHc------CCHHHHHHHHHHHHH-h--CccchHHH
Confidence 455666666666666666666544211 111122 2335555553 456666666654321 1 22346778
Q ss_pred HHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 84 ALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 84 ~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
...|..+.+.|+.++|.+.|..++.++|..+.+|...|..+.+.-. ...|+..|-++...
T Consensus 445 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-------------~~~A~~~~~~~~~~ 504 (597)
T 2xpi_A 445 LFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSD-------------MQTAINHFQNALLL 504 (597)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC-------------HHHHHHHHHHHHHh
Confidence 8888888888888888888888888888888888888877765421 34466666665544
No 131
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.85 E-value=0.014 Score=47.04 Aligned_cols=141 Identities=9% Similarity=-0.039 Sum_probs=89.3
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
...|..+...|-++-++..+.+...+ |+- .++ ....+.++++. +++.++++.++..--.. | ....
T Consensus 121 ~~~a~~~~~~g~~~~A~~~~~~al~~~P~~--~~a---~~~la~~~~~~------g~~~~A~~~l~~~~~~~--p-~~~~ 186 (287)
T 3qou_A 121 AQQAMQLMQESNYTDALPLLXDAWQLSNQN--GEI---GLLLAETLIAL------NRSEDAEAVLXTIPLQD--Q-DTRY 186 (287)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTTSC--HHH---HHHHHHHHHHT------TCHHHHHHHHTTSCGGG--C-SHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHhCCcc--hhH---HHHHHHHHHHC------CCHHHHHHHHHhCchhh--c-chHH
Confidence 45677778888888888888886553 322 233 33446777774 56777777777653321 1 2233
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCC--
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKE-- 159 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~-- 159 (173)
.....|..+.+.|+.++|-..|..|+..+|..+.+|..-|..+...-. -..|+.+|.++++.+.+
T Consensus 187 ~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~-------------~~~A~~~l~~~l~~~p~~~ 253 (287)
T 3qou_A 187 QGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGR-------------NEEALELLFGHLRXDLTAA 253 (287)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHHHCTTGG
T ss_pred HHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHccc-------------HHHHHHHHHHHHhcccccc
Confidence 444455557777777777777777777777777777777776655531 34577777777776422
Q ss_pred -chhhhhHHHHh
Q psy5931 160 -SMSRKYLAKVD 170 (173)
Q Consensus 160 -~k~Rk~laRiL 170 (173)
..+|..++.++
T Consensus 254 ~~~a~~~l~~~~ 265 (287)
T 3qou_A 254 DGQTRXTFQEIL 265 (287)
T ss_dssp GGHHHHHHHHHH
T ss_pred cchHHHHHHHHH
Confidence 45666666554
No 132
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=96.84 E-value=0.0097 Score=48.89 Aligned_cols=133 Identities=11% Similarity=0.024 Sum_probs=92.5
Q ss_pred HHHHHHhCCChHHHHHHHHhhcCC----CCCc-HHHHHHHHHHHHHHHhhhhccC-ChhHHHHHHHHhhhccccCCCchh
Q psy5931 5 FGKIARKHHLTSVCLDSLFRLYTI----PSVP-IVDCFEKIRQQVKCYLQMAALD-GKNQLQEGLEVIEHTNLKYLTKEM 78 (173)
Q Consensus 5 fa~iARkh~l~~vc~~~L~ki~~l----p~i~-v~daF~KlrEq~kc~l~~~~~~-~~~el~~gL~vi~~tnl~~F~~~q 78 (173)
.|.+....|-++-++..+.+...+ |+-+ ..+++ ...+.||+.+.... .-.-+..++++....+- .++.
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~---~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~---~~~~ 182 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFF---FKMSESYYYMKQTYFSMDYARQAYEIYKEHEA---YNIR 182 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHH---HHHHHHHHHTTCHHHHHHHHHHHHHHHHTCST---THHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHH---HHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcc---chHH
Confidence 577888899999999999998775 3211 33333 34466777752211 11126677777666532 2567
Q ss_pred hHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhH------HHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHH
Q psy5931 79 TAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMV------KAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMH 152 (173)
Q Consensus 79 kaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~------kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLq 152 (173)
.+..+...|.++..+|++++|...|..|+.+.+..+ .+|..-|.....+-. -..|+.+|-+
T Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~-------------~~~A~~~~~~ 249 (383)
T 3ulq_A 183 LLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQ-------------YEDAIPYFKR 249 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCC-------------HHHHHHHHHH
Confidence 889999999999999999999999999999866443 577777776655531 2457777777
Q ss_pred Hchh
Q psy5931 153 ACRH 156 (173)
Q Consensus 153 A~~~ 156 (173)
|...
T Consensus 250 al~~ 253 (383)
T 3ulq_A 250 AIAV 253 (383)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 133
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=96.80 E-value=0.0031 Score=52.50 Aligned_cols=109 Identities=9% Similarity=0.049 Sum_probs=75.1
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
..+|.+..+.|-++-++..+.+...+ |. .+++ ...+.||.... ++.++++.++..-- ..+...+
T Consensus 241 ~~~~~~~~~~~~~~~A~~~~~~~l~~~~~---~~~~---~~l~~~~~~~~------~~~~A~~~~~~~~~---~~~~~~~ 305 (514)
T 2gw1_A 241 EHTGIFKFLKNDPLGAHEDIKKAIELFPR---VNSY---IYMALIMADRN------DSTEYYNYFDKALK---LDSNNSS 305 (514)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHHCCC---HHHH---HHHHHHHHTSS------CCTTGGGHHHHHHT---TCTTCTH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCcc---HHHH---HHHHHHHHHCC------CHHHHHHHHHHHhh---cCcCCHH
Confidence 45778888899999999999887654 33 3443 33477777652 23333333332211 1233456
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHh
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEA 126 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~ 126 (173)
.+...|.++.++|++++|...|..++.++|..+.+|..-|..+..
T Consensus 306 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 350 (514)
T 2gw1_A 306 VYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYR 350 (514)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHH
Confidence 888899999999999999999999999999888888877766544
No 134
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=96.78 E-value=0.0077 Score=49.07 Aligned_cols=150 Identities=7% Similarity=-0.041 Sum_probs=99.6
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCC-CC-cHHHHHHHHHHHHHHHhhhhccC-ChhHHHHHHHHhhhccccCCCchhh
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIP-SV-PIVDCFEKIRQQVKCYLQMAALD-GKNQLQEGLEVIEHTNLKYLTKEMT 79 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp-~i-~v~daF~KlrEq~kc~l~~~~~~-~~~el~~gL~vi~~tnl~~F~~~qk 79 (173)
..+|.+....|-++-++..+.+...+- .. .......-....+.+|+.+.... ...-+.+++++..... .+...
T Consensus 227 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~----~~~~~ 302 (411)
T 4a1s_A 227 GNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELG----EREVE 302 (411)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTT----CHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC----CHHHH
Confidence 457888888898898888888764421 10 00111112344566777642110 0111555555555432 34567
Q ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHccchhh------HHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHH
Q psy5931 80 AEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVM------VKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHA 153 (173)
Q Consensus 80 aE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~------~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA 153 (173)
++.+...|.++..+|++++|.+.|..|+.+.+.. +.++...|..+..+-. -..|+.+|-+|
T Consensus 303 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~-------------~~~A~~~~~~a 369 (411)
T 4a1s_A 303 AQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGG-------------HERALKYAEQH 369 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC-------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhcc-------------HHHHHHHHHHH
Confidence 8999999999999999999999999999997654 4577778877766531 35688899999
Q ss_pred chhCCCchhhhhHHHH
Q psy5931 154 CRHQKESMSRKYLAKV 169 (173)
Q Consensus 154 ~~~~~~~k~Rk~laRi 169 (173)
.........+...+|+
T Consensus 370 l~~~~~~~~~~~~~~~ 385 (411)
T 4a1s_A 370 LQLAXXXXXXXXXXXX 385 (411)
T ss_dssp HHHCCHHHHHHHHHHH
T ss_pred HHHHhhcccchhhhhh
Confidence 8887766666666554
No 135
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=96.77 E-value=0.0062 Score=46.81 Aligned_cols=104 Identities=11% Similarity=0.018 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccc-cCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHcc-----
Q psy5931 36 CFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNL-KYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQM----- 109 (173)
Q Consensus 36 aF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl-~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql----- 109 (173)
.+..+...+.+++.. +++.++++.++..-- +-=.++..+..+...|.++...|++++|.+.|..|+.+
T Consensus 4 ~~~~l~~~g~~~~~~------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 77 (338)
T 3ro2_A 4 SCLELALEGERLCKS------GDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 77 (338)
T ss_dssp HHHHHHHHHHHHHHT------TCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh------ccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccc
Confidence 455677778888875 345555555443211 11134556899999999999999999999999999998
Q ss_pred -chhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC
Q psy5931 110 -HDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK 158 (173)
Q Consensus 110 -~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~ 158 (173)
.+..+.+|...|.....+-. -..|+.+|-+|.....
T Consensus 78 ~~~~~~~~~~~l~~~~~~~g~-------------~~~A~~~~~~al~~~~ 114 (338)
T 3ro2_A 78 DQLGEAKASGNLGNTLKVLGN-------------FDEAIVCCQRHLDISR 114 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHccC-------------HHHHHHHHHHHHHHHH
Confidence 56677888888887765531 3457778877776543
No 136
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=96.76 E-value=0.001 Score=56.10 Aligned_cols=97 Identities=9% Similarity=0.036 Sum_probs=70.3
Q ss_pred HhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHH
Q psy5931 23 FRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKA 102 (173)
Q Consensus 23 ~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~ 102 (173)
+.+.+++.-+-.+-...+.+.+.+++... ++.++++..+..-- ..+..++.+...|..+.++|++++|-+.
T Consensus 11 ~~~~~~~~~~~~~~a~~~~~~g~~~~~~g------~~~~A~~~~~~al~---~~p~~~~~~~~la~~~~~~g~~~~A~~~ 81 (537)
T 3fp2_A 11 AQLKGLSPSQRQAYAVQLKNRGNHFFTAK------NFNEAIKYYQYAIE---LDPNEPVFYSNISACYISTGDLEKVIEF 81 (537)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHHHHHHTT------CCC-CHHHHHHHHH---HCTTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HhhcCCCcchhHHHHHHHHHHHHHHHHhc------cHHHHHHHHHHHHh---hCCCCcHHHHHHHHHHHHcCCHHHHHHH
Confidence 33444433333345677888999999853 33344444333221 1245679999999999999999999999
Q ss_pred HHHHHccchhhHHHHHHHHHhHHhhc
Q psy5931 103 FSAAVQMHDVMVKAWALWGDYMEAQF 128 (173)
Q Consensus 103 F~~Avql~~~~~kaW~~WG~~~d~~f 128 (173)
|..++.++|+.+.+|..-|..+..+-
T Consensus 82 ~~~al~~~p~~~~~~~~la~~~~~~g 107 (537)
T 3fp2_A 82 TTKALEIKPDHSKALLRRASANESLG 107 (537)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCchHHHHHHHHHHHHHcC
Confidence 99999999999999999998877663
No 137
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=96.74 E-value=0.0027 Score=53.03 Aligned_cols=76 Identities=16% Similarity=-0.023 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC-C
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK-E 159 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~-~ 159 (173)
..+...|..+.++|++++|-..|..|+.++|+.+++|...|..+..+-. -..|+.+|-+|..... +
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~-------------~~~A~~~l~~al~l~p~~ 297 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQ-------------MDSARDDFRKAQKYAPDD 297 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC-------------HHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-------------HHHHHHHHHHHHHHCCCC
Confidence 4889999999999999999999999999999999999999988766531 3568888888887642 3
Q ss_pred chhhhhHHHH
Q psy5931 160 SMSRKYLAKV 169 (173)
Q Consensus 160 ~k~Rk~laRi 169 (173)
..++..|+++
T Consensus 298 ~~a~~~L~~l 307 (338)
T 2if4_A 298 KAIRRELRAL 307 (338)
T ss_dssp ----------
T ss_pred HHHHHHHHHH
Confidence 4445555443
No 138
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.72 E-value=0.003 Score=55.63 Aligned_cols=97 Identities=7% Similarity=0.028 Sum_probs=71.6
Q ss_pred hHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCC
Q psy5931 57 NQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGS 136 (173)
Q Consensus 57 ~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~ 136 (173)
+++.++++..+..-- ..+..++.+...|..+.++|++++|.+.|..|++++|+.+++|..-|..+..+-.
T Consensus 20 g~~~~A~~~~~~Al~---~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~------- 89 (477)
T 1wao_1 20 KDYENAIKFYSQAIE---LNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGK------- 89 (477)
T ss_dssp TCHHHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTC-------
T ss_pred CCHHHHHHHHHHHHH---hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-------
Confidence 345555554443221 1344589999999999999999999999999999999999999999988776631
Q ss_pred CchhhhHHHHHHHHHHHchhCC-CchhhhhHHHH
Q psy5931 137 APNMVLGVFAVTCFMHACRHQK-ESMSRKYLAKV 169 (173)
Q Consensus 137 ~~~~~~~~~Ai~CyLqA~~~~~-~~k~Rk~laRi 169 (173)
-..|+.+|-+|..... +..++..++++
T Consensus 90 ------~~eA~~~~~~al~~~p~~~~~~~~l~~~ 117 (477)
T 1wao_1 90 ------FRAALRDYETVVKVKPHDKDAKMKYQEC 117 (477)
T ss_dssp ------HHHHHHHHHHHHHHSTTCTTHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3568888888888743 33445555544
No 139
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=96.71 E-value=0.026 Score=46.47 Aligned_cols=138 Identities=14% Similarity=0.067 Sum_probs=91.5
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC----CCCcHHHHHHHHHHHHHHHhhhhccCC-hhHHHHHHHHhhhccccCCCch
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI----PSVPIVDCFEKIRQQVKCYLQMAALDG-KNQLQEGLEVIEHTNLKYLTKE 77 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l----p~i~v~daF~KlrEq~kc~l~~~~~~~-~~el~~gL~vi~~tnl~~F~~~ 77 (173)
..+|.+-...|-++.++..+.+...+ +..+. ....-...-+.||..+..... ..-+..++++....+- +.
T Consensus 145 ~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~----~~ 219 (378)
T 3q15_A 145 FKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSI-RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN----DR 219 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC----HH
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC----HH
Confidence 45777888888888888888774332 11111 111122234556655421100 1115666666655432 45
Q ss_pred hhHHHHHHHHHHHHHhCCchHHHHHHHHHHc-----cchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHH
Q psy5931 78 MTAEFYALKGMLLAQIGRSAEANKAFSAAVQ-----MHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMH 152 (173)
Q Consensus 78 qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avq-----l~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLq 152 (173)
..+..+..-|..+..+|++++|...|..|+. -+|..+.++...|....++-. -..|+.+|-+
T Consensus 220 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~-------------~~~A~~~~~~ 286 (378)
T 3q15_A 220 FIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQ-------------TQKAFQFIEE 286 (378)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTC-------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCC-------------HHHHHHHHHH
Confidence 7788999999999999999999999999999 788888999988888776632 2457777777
Q ss_pred HchhCC
Q psy5931 153 ACRHQK 158 (173)
Q Consensus 153 A~~~~~ 158 (173)
|.....
T Consensus 287 al~~~~ 292 (378)
T 3q15_A 287 GLDHIT 292 (378)
T ss_dssp HHHHCC
T ss_pred HHHHHH
Confidence 776543
No 140
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=96.71 E-value=0.021 Score=39.06 Aligned_cols=139 Identities=8% Similarity=-0.073 Sum_probs=87.3
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCC-CCC-cHHHHHHHHHHHHHHHhhhhccCC-hhHHHHHHHHhhhccccCCCchh
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTI-PSV-PIVDCFEKIRQQVKCYLQMAALDG-KNQLQEGLEVIEHTNLKYLTKEM 78 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~l-p~i-~v~daF~KlrEq~kc~l~~~~~~~-~~el~~gL~vi~~tnl~~F~~~q 78 (173)
...+|.+....|-++.++..+.+...+ |.. .......-....+.+|+.+..... ..-+..++++....+ .++.
T Consensus 12 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~----~~~~ 87 (164)
T 3ro3_A 12 FGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK----DRAV 87 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT----CHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC----CcHH
Confidence 356788888889999999888886443 110 011111223445667776421110 111555666655543 3566
Q ss_pred hHHHHHHHHHHHHHhCCchHHHHHHHHHHccchh------hHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHH
Q psy5931 79 TAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDV------MVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMH 152 (173)
Q Consensus 79 kaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~------~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLq 152 (173)
.+..+...|.++..+|++++|...|..|+.+.+. .+.++..-|.....+- + -..|+.+|-+
T Consensus 88 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g--~-----------~~~A~~~~~~ 154 (164)
T 3ro3_A 88 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALG--N-----------HDQAMHFAEK 154 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--C-----------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHcc--C-----------HHHHHHHHHH
Confidence 7889999999999999999999999999988653 2345555555444432 1 2457777777
Q ss_pred HchhC
Q psy5931 153 ACRHQ 157 (173)
Q Consensus 153 A~~~~ 157 (173)
|....
T Consensus 155 a~~~~ 159 (164)
T 3ro3_A 155 HLEIS 159 (164)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 141
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=96.70 E-value=0.013 Score=45.10 Aligned_cols=111 Identities=12% Similarity=-0.009 Sum_probs=78.5
Q ss_pred HHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHH---HHH
Q psy5931 42 QQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVK---AWA 118 (173)
Q Consensus 42 Eq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~k---aW~ 118 (173)
+.+..+++. +++.++++.++..--.+-..+...+.+...|..+.++|++++|-..|..++..+|+.+. +|.
T Consensus 9 ~~a~~~~~~------g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 9 ATAQQKLQD------GNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp HHHHHHHHH------TCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred HHHHHHHHc------CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 446667763 56888888888765555555667788999999999999999999999999999998764 788
Q ss_pred HHHHhHHhhcC-------CCCCCCCCchhhhHHHHHHHHHHHchhCCCc
Q psy5931 119 LWGDYMEAQFT-------NPSPPGSAPNMVLGVFAVTCFMHACRHQKES 160 (173)
Q Consensus 119 ~WG~~~d~~f~-------~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~~ 160 (173)
..|.....+-. .-+ ....+..-...|+.+|-+++..+.++
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~A~~~~~~~l~~~P~~ 129 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVD--RSDRDPQQARAAFSDFSKLVRGYPNS 129 (225)
T ss_dssp HHHHHHHHHHC----------------CCHHHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHhhhhhhhhhhhccc--hhhcCcHHHHHHHHHHHHHHHHCcCC
Confidence 88876654310 000 00012234567899999988875443
No 142
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=96.70 E-value=0.012 Score=39.01 Aligned_cols=92 Identities=17% Similarity=0.140 Sum_probs=64.3
Q ss_pred HHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHH
Q psy5931 43 QVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGD 122 (173)
Q Consensus 43 q~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~ 122 (173)
.+.++... +++.+++++.+..--. .+...+.+...|..+...|+.++|-+.|..++++.|..+..|...|.
T Consensus 7 l~~~~~~~------~~~~~A~~~~~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 77 (136)
T 2fo7_A 7 LGNAYYKQ------GDYDEAIEYYQKALEL---DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGN 77 (136)
T ss_dssp HHHHHHHH------TCHHHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHc------CcHHHHHHHHHHHHHc---CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHH
Confidence 35566653 3456666655543211 12346778888999999999999999999999999999999988887
Q ss_pred hHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 123 YMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 123 ~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
.+...- + -..|+..|-++...
T Consensus 78 ~~~~~~--~-----------~~~A~~~~~~~~~~ 98 (136)
T 2fo7_A 78 AYYKQG--D-----------YDEAIEYYQKALEL 98 (136)
T ss_dssp HHHTTT--C-----------HHHHHHHHHHHHHH
T ss_pred HHHHhc--C-----------HHHHHHHHHHHHHh
Confidence 665432 1 24566666666655
No 143
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=96.64 E-value=0.0082 Score=52.64 Aligned_cols=109 Identities=16% Similarity=0.005 Sum_probs=80.1
Q ss_pred HHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHH
Q psy5931 40 IRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWAL 119 (173)
Q Consensus 40 lrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~ 119 (173)
....+.+|++. +++.++++..+..-- ..+..++.+...|..+.++|++++|.+.|..|++++|+.+.+|..
T Consensus 26 ~~~lg~~~~~~------g~~~~A~~~~~~al~---~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 96 (568)
T 2vsy_A 26 WLMLADAELGM------GDTTAGEMAVQRGLA---LHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALW 96 (568)
T ss_dssp HHHHHHHHHHH------TCHHHHHHHHHHHHT---TSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHc------CCHHHHHHHHHHHHH---hCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 34557777774 456677666655432 134568899999999999999999999999999999999999999
Q ss_pred HHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC-CchhhhhHHHHh
Q psy5931 120 WGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK-ESMSRKYLAKVD 170 (173)
Q Consensus 120 WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~-~~k~Rk~laRiL 170 (173)
-|..+..+-. -..|+.+|-+|..... +..+...++.++
T Consensus 97 la~~~~~~g~-------------~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 135 (568)
T 2vsy_A 97 LGHALEDAGQ-------------AEAAAAAYTRAHQLLPEEPYITAQLLNWR 135 (568)
T ss_dssp HHHHHHHTTC-------------HHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCC-------------HHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 9988766531 3568888888887743 234444555443
No 144
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.63 E-value=0.0029 Score=41.88 Aligned_cols=61 Identities=18% Similarity=0.037 Sum_probs=52.5
Q ss_pred HHHHHHHHhCCchHHHHHHHHHHccchhhHH-HHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC
Q psy5931 85 LKGMLLAQIGRSAEANKAFSAAVQMHDVMVK-AWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK 158 (173)
Q Consensus 85 LKG~fl~~Lg~~deA~~~F~~Avql~~~~~k-aW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~ 158 (173)
-+|..+.+.|++++|.+.|..+++++|..+. +|...|..+..+- + -..|+.+|-+|+..+.
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~--~-----------~~~A~~~~~~al~~~p 66 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLG--D-----------WQKALNNYQSAIELNP 66 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHT--C-----------HHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcC--C-----------HHHHHHHHHHHHhcCC
Confidence 4788999999999999999999999999999 9999999877653 1 3568999999998753
No 145
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.62 E-value=0.044 Score=44.14 Aligned_cols=116 Identities=15% Similarity=0.068 Sum_probs=81.1
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccC-ChhHHHHHHHHhhhccccCCCchhhH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALD-GKNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~-~~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
...+|.+....|-++-++..|.++-.+. | ......+.-.. .+.+..... .-..++.+++. .+...
T Consensus 154 ~~~la~~~~~~g~~~~A~~~l~~~~~~~--p-~~~~~~~~~~~-~l~~~~~~~~a~~~l~~al~~----------~P~~~ 219 (287)
T 3qou_A 154 GLLLAETLIALNRSEDAEAVLXTIPLQD--Q-DTRYQGLVAQI-ELLXQAADTPEIQQLQQQVAE----------NPEDA 219 (287)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTTSCGGG--C-SHHHHHHHHHH-HHHHHHTSCHHHHHHHHHHHH----------CTTCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHhCchhh--c-chHHHHHHHHH-HHHhhcccCccHHHHHHHHhc----------CCccH
Confidence 3567899999999999999999975531 1 22222222222 232221100 01123333332 45667
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccchhh--HHHHHHHHHhHHhhcCCC
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMHDVM--VKAWALWGDYMEAQFTNP 131 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~--~kaW~~WG~~~d~~f~~~ 131 (173)
+.+...|..+...|++++|-..|..+++.+|+. +.+|..-|..++.+...+
T Consensus 220 ~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 272 (287)
T 3qou_A 220 ALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGD 272 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCC
Confidence 888999999999999999999999999999998 899999999999886555
No 146
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=96.61 E-value=0.032 Score=44.47 Aligned_cols=133 Identities=9% Similarity=-0.047 Sum_probs=80.8
Q ss_pred HHHHHhCCChHHHHHHHHhhcCCCC-CcHHHHHHHHHH-HHHHHhhhhccCChhHHHHHHHHhhhcc---ccCCCchhhH
Q psy5931 6 GKIARKHHLTSVCLDSLFRLYTIPS-VPIVDCFEKIRQ-QVKCYLQMAALDGKNQLQEGLEVIEHTN---LKYLTKEMTA 80 (173)
Q Consensus 6 a~iARkh~l~~vc~~~L~ki~~lp~-i~v~daF~KlrE-q~kc~l~~~~~~~~~el~~gL~vi~~tn---l~~F~~~qka 80 (173)
+....++|-++-++..+.++-..+. .+....+..... .+.+|+. ..++.++++..+..- ...-.....+
T Consensus 82 i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~Ai~~~~~al~~~~~~~~~~~~~ 155 (293)
T 3u3w_A 82 VIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLK------KVDYEYCILELKKLLNQQLTGIDVYQNL 155 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTT------SSCHHHHHHHHHHHHHTCCCCSCTTHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHc------ccCHHHHHHHHHHHHHHhcccccHHHHH
Confidence 4556677888888888888776543 222222222221 2334443 223444444433321 1111223567
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHc-------cchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHH
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQ-------MHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHA 153 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avq-------l~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA 153 (173)
..+..-|.++..+|++++|...|..|+. ..+..+.++..-|..+..+-. -..|+..|-+|
T Consensus 156 ~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~-------------y~~A~~~~~~a 222 (293)
T 3u3w_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSR-------------YEESLYQVNKA 222 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTC-------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhH-------------HHHHHHHHHHH
Confidence 7899999999999999999999999994 344555677777777665531 24566677666
Q ss_pred chhC
Q psy5931 154 CRHQ 157 (173)
Q Consensus 154 ~~~~ 157 (173)
+...
T Consensus 223 l~~~ 226 (293)
T 3u3w_A 223 IEIS 226 (293)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 147
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=96.59 E-value=0.058 Score=44.70 Aligned_cols=51 Identities=14% Similarity=0.105 Sum_probs=46.2
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhc
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQF 128 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f 128 (173)
+..++.+...|..+...|++++|.+.|..++.++|. +.+|...|..+...-
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~~~-~~~~~~l~~~~~~~~ 284 (514)
T 2gw1_A 234 EKLAISLEHTGIFKFLKNDPLGAHEDIKKAIELFPR-VNSYIYMALIMADRN 284 (514)
T ss_dssp HHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHTSS
T ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-HHHHHHHHHHHHHCC
Confidence 678899999999999999999999999999999999 999999888776653
No 148
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=96.52 E-value=0.029 Score=46.02 Aligned_cols=137 Identities=10% Similarity=0.025 Sum_probs=89.9
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCc--HHHHHHHHHHHHHHHhhhhccCC-hhHHHHHHHHhhhccccCCCchh
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVP--IVDCFEKIRQQVKCYLQMAALDG-KNQLQEGLEVIEHTNLKYLTKEM 78 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~--v~daF~KlrEq~kc~l~~~~~~~-~~el~~gL~vi~~tnl~~F~~~q 78 (173)
..+|.+-...|-++.++..+.+...+ +..+ ......-+..-+.||..+..... -.-+..++++....+ .++.
T Consensus 147 ~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~----~~~~ 222 (383)
T 3ulq_A 147 FKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK----QPQL 222 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT----CHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC----ChHH
Confidence 46777788888888888888774432 1111 11111223334556665421110 111556666665543 3667
Q ss_pred hHHHHHHHHHHHHHhCCchHHHHHHHHHHc-----cc-hhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHH
Q psy5931 79 TAEFYALKGMLLAQIGRSAEANKAFSAAVQ-----MH-DVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMH 152 (173)
Q Consensus 79 kaE~~~LKG~fl~~Lg~~deA~~~F~~Avq-----l~-~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLq 152 (173)
.+..+...|.++..+|++++|.+.|..|+. -+ |..+.++..-|.....+-. -..|+.+|-+
T Consensus 223 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~-------------~~~A~~~~~~ 289 (383)
T 3ulq_A 223 MGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGK-------------IDKAHEYHSK 289 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTC-------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCC-------------HHHHHHHHHH
Confidence 788999999999999999999999999999 45 7788899888888776631 2456777777
Q ss_pred Hchh
Q psy5931 153 ACRH 156 (173)
Q Consensus 153 A~~~ 156 (173)
|...
T Consensus 290 al~~ 293 (383)
T 3ulq_A 290 GMAY 293 (383)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6655
No 149
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.49 E-value=0.071 Score=42.68 Aligned_cols=138 Identities=14% Similarity=0.080 Sum_probs=85.6
Q ss_pred HHHHHHHhCCChHHHHHHHHhhcCC-CCC-cHHHHHHHHHHHHHHHhhhhccCC-hhHHHHHHHHhhhccccCCCchhhH
Q psy5931 4 QFGKIARKHHLTSVCLDSLFRLYTI-PSV-PIVDCFEKIRQQVKCYLQMAALDG-KNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 4 ~fa~iARkh~l~~vc~~~L~ki~~l-p~i-~v~daF~KlrEq~kc~l~~~~~~~-~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
+.+.+-+..|-++-++..+.+...+ +.+ ...++-.-...-+.||..+..... -.-+..++++-...+ .....+
T Consensus 42 ~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g----~~~~~a 117 (292)
T 1qqe_A 42 QAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRG----QFRRGA 117 (292)
T ss_dssp HHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT----CHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcC----CHHHHH
Confidence 4455667788888888877765332 000 011222334455677776421100 011445555443321 234457
Q ss_pred HHHHHHHHHHHHh-CCchHHHHHHHHHHccchhh------HHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHH
Q psy5931 81 EFYALKGMLLAQI-GRSAEANKAFSAAVQMHDVM------VKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHA 153 (173)
Q Consensus 81 E~~~LKG~fl~~L-g~~deA~~~F~~Avql~~~~------~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA 153 (173)
..+...|.++... |++++|...|..|+.+.|.. +.+|...|..+-.+- + -..|+.+|-++
T Consensus 118 ~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g--~-----------~~~A~~~~~~a 184 (292)
T 1qqe_A 118 NFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDG--Q-----------YIEASDIYSKL 184 (292)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--C-----------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhC--C-----------HHHHHHHHHHH
Confidence 8899999999994 99999999999999998854 567777787776653 1 24577777777
Q ss_pred chhCC
Q psy5931 154 CRHQK 158 (173)
Q Consensus 154 ~~~~~ 158 (173)
+....
T Consensus 185 l~~~~ 189 (292)
T 1qqe_A 185 IKSSM 189 (292)
T ss_dssp HHTTS
T ss_pred HHHHh
Confidence 77643
No 150
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=96.48 E-value=0.0071 Score=44.10 Aligned_cols=83 Identities=14% Similarity=0.061 Sum_probs=62.5
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHh-HHhhcCCCCCCCCCchhhhHHHHHHHHHHHch
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDY-MEAQFTNPSPPGSAPNMVLGVFAVTCFMHACR 155 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~-~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~ 155 (173)
+..++.+...|.++...|++++|...|..|++++|+.+.+|...|.. ....-.- .-..|+.+|-+++.
T Consensus 41 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~-----------~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 41 PQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQH-----------MTAQTRAMIDKALA 109 (177)
T ss_dssp CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTC-----------CCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCc-----------chHHHHHHHHHHHH
Confidence 34568999999999999999999999999999999999999999987 3333111 02568888888887
Q ss_pred hCC-CchhhhhHHHHh
Q psy5931 156 HQK-ESMSRKYLAKVD 170 (173)
Q Consensus 156 ~~~-~~k~Rk~laRiL 170 (173)
... +..+...++++.
T Consensus 110 ~~p~~~~~~~~la~~~ 125 (177)
T 2e2e_A 110 LDSNEITALMLLASDA 125 (177)
T ss_dssp HCTTCHHHHHHHHHHH
T ss_pred hCCCcHHHHHHHHHHH
Confidence 743 234445555554
No 151
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.43 E-value=0.0082 Score=41.45 Aligned_cols=94 Identities=7% Similarity=0.056 Sum_probs=64.1
Q ss_pred CCChHHHHHHHHhhcCCC--CCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHH
Q psy5931 12 HHLTSVCLDSLFRLYTIP--SVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGML 89 (173)
Q Consensus 12 h~l~~vc~~~L~ki~~lp--~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~f 89 (173)
.|-++.++..+.+...+. .-.-.++ ....+.||+.+ +++.++++.++..--. .+..++.+...|..
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~---~~~lg~~~~~~------~~~~~A~~~~~~al~~---~p~~~~~~~~l~~~ 70 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAEC---YLGLGSTFRTL------GEYRKAEAVLANGVKQ---FPNHQALRVFYAMV 70 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHH---HHHHHHHHHHT------TCHHHHHHHHHHHHHH---CTTCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHH---HHHHHHHHHHc------CCHHHHHHHHHHHHHh---CCCchHHHHHHHHH
Confidence 344556777777776661 0112223 34457888875 5677777777665321 23348899999999
Q ss_pred HHHhCCchHHHHHHHHHHccchhhHHHH
Q psy5931 90 LAQIGRSAEANKAFSAAVQMHDVMVKAW 117 (173)
Q Consensus 90 l~~Lg~~deA~~~F~~Avql~~~~~kaW 117 (173)
+.++|++++|...|..++...|+.+...
T Consensus 71 ~~~~g~~~~A~~~~~~al~~~p~~~~~~ 98 (117)
T 3k9i_A 71 LYNLGRYEQGVELLLKIIAETSDDETIQ 98 (117)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999999999999988766543
No 152
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=96.42 E-value=0.011 Score=40.45 Aligned_cols=65 Identities=11% Similarity=0.118 Sum_probs=49.5
Q ss_pred HHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhh------HHHHHHHHHhHHhh
Q psy5931 59 LQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVM------VKAWALWGDYMEAQ 127 (173)
Q Consensus 59 l~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~------~kaW~~WG~~~d~~ 127 (173)
+.+++++....+ .+...+..+...|.++..+|++++|...|..|+.+.+.. +.++...|..+...
T Consensus 32 ~~~al~~~~~~~----~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~ 102 (164)
T 3ro3_A 32 HEQRLLIAKEFG----DKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL 102 (164)
T ss_dssp HHHHHHHHHHHT----CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC----CchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence 555565555432 356677899999999999999999999999999988764 56676777666554
No 153
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=96.38 E-value=0.0089 Score=54.72 Aligned_cols=105 Identities=11% Similarity=0.019 Sum_probs=78.0
Q ss_pred HhCCChHHHHHHHHhhc--------CC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhH
Q psy5931 10 RKHHLTSVCLDSLFRLY--------TI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 10 Rkh~l~~vc~~~L~ki~--------~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
-..|-++-++..+.+.- .+ |+- .++ ....+.+|+++ +++.++++.++..-- ..+..+
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~--~~~---~~~~a~~~~~~------g~~~~A~~~~~~al~---~~p~~~ 467 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSES--VEL---PLMEVRALLDL------GDVAKATRKLDDLAE---RVGWRW 467 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTC--SHH---HHHHHHHHHHH------TCHHHHHHHHHHHHH---HHCCCH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccc--hhH---HHHHHHHHHhc------CCHHHHHHHHHHHhc---cCcchH
Confidence 34566777888888764 22 321 122 33457888875 456677766655433 245568
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhc
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQF 128 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f 128 (173)
+.+..+|..+.++|++++|.+.|..|++++|+.+.+|..-|..+..+-
T Consensus 468 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g 515 (681)
T 2pzi_A 468 RLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAG 515 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999998877664
No 154
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=96.28 E-value=0.055 Score=39.28 Aligned_cols=108 Identities=11% Similarity=0.011 Sum_probs=67.2
Q ss_pred CCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccC-ChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHH
Q psy5931 12 HHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALD-GKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLL 90 (173)
Q Consensus 12 h~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~-~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl 90 (173)
.|-++.+...+..+.+.|.. ..++ ....+.+|+...... ...-+.+++++....+. ++..+..+...|.++
T Consensus 5 ~g~~~~A~~~~~~~~~~~~~-~~~~---~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~l~~~~ 76 (203)
T 3gw4_A 5 AHDYALAERQAQALLAHPAT-ASGA---RFMLGYVYAFMDRFDEARASFQALQQQAQKSGD----HTAEHRALHQVGMVE 76 (203)
T ss_dssp --CHHHHHHHHHHHHTSTTT-HHHH---HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC----HHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHhcCChHH-HHHH---HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC----cHHHHHHHHHHHHHH
Confidence 45566666633333344421 2222 334566777642211 11126666776666553 677889999999999
Q ss_pred HHhCCchHHHHHHHHHHcc------ch-hhHHHHHHHHHhHHhh
Q psy5931 91 AQIGRSAEANKAFSAAVQM------HD-VMVKAWALWGDYMEAQ 127 (173)
Q Consensus 91 ~~Lg~~deA~~~F~~Avql------~~-~~~kaW~~WG~~~d~~ 127 (173)
..+|++++|...|..|+.+ ++ ..+.++..-|.....+
T Consensus 77 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~ 120 (203)
T 3gw4_A 77 RMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHF 120 (203)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998 33 3455566666655544
No 155
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=96.24 E-value=0.12 Score=41.12 Aligned_cols=121 Identities=12% Similarity=0.073 Sum_probs=76.6
Q ss_pred HHHHHHhCCChHHHHHHHHhhcCCC--CCcHHHHHHHHHHHHHHHhhhhccCC-hhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 5 FGKIARKHHLTSVCLDSLFRLYTIP--SVPIVDCFEKIRQQVKCYLQMAALDG-KNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 5 fa~iARkh~l~~vc~~~L~ki~~lp--~i~v~daF~KlrEq~kc~l~~~~~~~-~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
+|.+-...|-++-++..+.+...+. ..+......-...-+.+|..+..... -.-+..++++.+..+- .+.....
T Consensus 121 ~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~---~~~~~~~ 197 (293)
T 2qfc_A 121 VAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD---NEEFDVK 197 (293)
T ss_dssp HHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC---CHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc---cccchHH
Confidence 4555566778888888887765431 11111112223344667766421000 0114555555554332 2333448
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchh------hHHHHHHHHHhHHhhc
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDV------MVKAWALWGDYMEAQF 128 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~------~~kaW~~WG~~~d~~f 128 (173)
.+...|..+.++|++++|.+.|..|+.+.+. .+.++..-|.....+-
T Consensus 198 ~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g 250 (293)
T 2qfc_A 198 VRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTT
T ss_pred HHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999998765 4788888888877764
No 156
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=96.20 E-value=0.0055 Score=56.09 Aligned_cols=140 Identities=11% Similarity=-0.107 Sum_probs=88.7
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
...|.+..+.|-++-++..+.+...+ |+- .++ ....+.+|+++ +++.++++..+..-- ..+..++
T Consensus 437 ~~~a~~~~~~g~~~~A~~~~~~al~~~p~~--~~a---~~~lg~~~~~~------g~~~~A~~~~~~al~---l~P~~~~ 502 (681)
T 2pzi_A 437 LMEVRALLDLGDVAKATRKLDDLAERVGWR--WRL---VWYRAVAELLT------GDYDSATKHFTEVLD---TFPGELA 502 (681)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCCC--HHH---HHHHHHHHHHH------TCHHHHHHHHHHHHH---HSTTCSH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhccCcch--HHH---HHHHHHHHHHc------CCHHHHHHHHHHHHH---hCCCChH
Confidence 45577777788888888888886543 221 122 23446677764 445555555544321 1233467
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCC-c
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKE-S 160 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~-~ 160 (173)
.+...|..+.++|++++ .+.|..|+.++|+.+.+|..-|..+..+-. -..|+.+|-+|+....+ .
T Consensus 503 ~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~-------------~~~A~~~~~~al~l~P~~~ 568 (681)
T 2pzi_A 503 PKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGD-------------RVGAVRTLDEVPPTSRHFT 568 (681)
T ss_dssp HHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTC-------------HHHHHHHHHTSCTTSTTHH
T ss_pred HHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCC-------------HHHHHHHHHhhcccCcccH
Confidence 77788888888888888 888888888888888888877777665531 24577777777766422 3
Q ss_pred hhhhhHHHHh
Q psy5931 161 MSRKYLAKVD 170 (173)
Q Consensus 161 k~Rk~laRiL 170 (173)
.++..++.++
T Consensus 569 ~a~~~~~~~~ 578 (681)
T 2pzi_A 569 TARLTSAVTL 578 (681)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 3444444443
No 157
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=96.20 E-value=0.081 Score=42.66 Aligned_cols=119 Identities=8% Similarity=0.028 Sum_probs=62.7
Q ss_pred HHHHHHHhCCChHHHHHHHHhhcCC-CCC-cHHHHHHHHHHHHHHHhhhhccC-ChhHHHHHHHHhhhccccCCCchhhH
Q psy5931 4 QFGKIARKHHLTSVCLDSLFRLYTI-PSV-PIVDCFEKIRQQVKCYLQMAALD-GKNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 4 ~fa~iARkh~l~~vc~~~L~ki~~l-p~i-~v~daF~KlrEq~kc~l~~~~~~-~~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
+.+.+-+..|-++-++..+.+...+ +.. ...++-.-+..-+.||..+.... .-.-++.++++....+ .+...+
T Consensus 41 ~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g----~~~~~a 116 (307)
T 2ifu_A 41 KAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENG----TPDTAA 116 (307)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTT----CHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC----CHHHHH
Confidence 4455566677777777666654221 000 01112222233345555432111 1112556666543322 233456
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccchhh------HHHHHHHHHhHHhh
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMHDVM------VKAWALWGDYMEAQ 127 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~------~kaW~~WG~~~d~~ 127 (173)
..+..-|.++.+ |++++|...|..|+.+.+.. +.++...|..+..+
T Consensus 117 ~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~ 168 (307)
T 2ifu_A 117 MALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQ 168 (307)
T ss_dssp HHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHc
Confidence 677777777777 77888888888887776643 45666666665544
No 158
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.19 E-value=0.031 Score=44.88 Aligned_cols=110 Identities=13% Similarity=0.144 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHhhhhccC-ChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccch
Q psy5931 33 IVDCFEKIRQQVKCYLQMAALD-GKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHD 111 (173)
Q Consensus 33 v~daF~KlrEq~kc~l~~~~~~-~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~ 111 (173)
..+|..-..+-+.+|....... .-.-+..++++-...+ .++..+..+...|.++.++|++++|-..|..|+.+.+
T Consensus 33 ~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~----~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~ 108 (292)
T 1qqe_A 33 FEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAG----NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFT 108 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 3444444444455665531110 0111555566544432 3456689999999999999999999999999999988
Q ss_pred hh------HHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC
Q psy5931 112 VM------VKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK 158 (173)
Q Consensus 112 ~~------~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~ 158 (173)
.. +.+|..-|..+...- .+ -..|+.+|-+|+....
T Consensus 109 ~~g~~~~~a~~~~~lg~~~~~~l-g~-----------~~~A~~~~~~Al~~~~ 149 (292)
T 1qqe_A 109 HRGQFRRGANFKFELGEILENDL-HD-----------YAKAIDCYELAGEWYA 149 (292)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTT-CC-----------HHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhh-cC-----------HHHHHHHHHHHHHHHH
Confidence 64 567777787766531 11 3579999999988743
No 159
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.17 E-value=0.015 Score=40.57 Aligned_cols=79 Identities=16% Similarity=0.119 Sum_probs=62.5
Q ss_pred chhhHHHHHHHHHHHHHhCC---chHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHH
Q psy5931 76 KEMTAEFYALKGMLLAQIGR---SAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMH 152 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~---~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLq 152 (173)
.+..++++...|..+..-++ .++|-+.|..|++++|+.++++...|....... + -..|+..|-+
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g--~-----------y~~Ai~~w~~ 68 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISF--R-----------FQEAIDTWVL 68 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--C-----------HHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcC--C-----------HHHHHHHHHH
Confidence 46678999999999977766 799999999999999999999999998766542 1 3568888888
Q ss_pred HchhCCCchhhhhHH
Q psy5931 153 ACRHQKESMSRKYLA 167 (173)
Q Consensus 153 A~~~~~~~k~Rk~la 167 (173)
......+..-|..|.
T Consensus 69 ~l~~~p~~~~~~~i~ 83 (93)
T 3bee_A 69 LLDSNDPNLDRVTII 83 (93)
T ss_dssp HHTCCCTTCCHHHHH
T ss_pred HHhhCCCCccHHHHH
Confidence 887765544454444
No 160
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=96.15 E-value=0.0041 Score=51.83 Aligned_cols=84 Identities=13% Similarity=0.187 Sum_probs=53.5
Q ss_pred HHHHHHHHhhhhc---cCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHcc-------
Q psy5931 40 IRQQVKCYLQMAA---LDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQM------- 109 (173)
Q Consensus 40 lrEq~kc~l~~~~---~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql------- 109 (173)
.-+|.+||+...- ...-.++.+.+. ..+.+...+.++..|.+-|.++..+|++++|-+.|..|+.+
T Consensus 12 ~l~~l~chf~w~l~~~~~~l~~~e~~~~----~~~~~~~~~~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~ 87 (472)
T 4g1t_A 12 SLRQLKCHFTWNLMEGENSLDDFEDKVF----YRTEFQNREFKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHAD 87 (472)
T ss_dssp HHHTSCSTTTSCTTTTCCCHHHHHHHHH----HHTTSCC---CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGG
T ss_pred HHHHhhChHHHhHHHHHHHHHHHHHHHH----HHHHhCCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCcc
Confidence 3467789874211 111223444332 23456678889999999999999999999999999999987
Q ss_pred --chhhHHHHHHHHHhHHhh
Q psy5931 110 --HDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 110 --~~~~~kaW~~WG~~~d~~ 127 (173)
++...-+|..-|.....+
T Consensus 88 ~~~~~~~~~~~nla~~y~~~ 107 (472)
T 4g1t_A 88 QAEIRSLVTWGNYAWVYYHM 107 (472)
T ss_dssp GCTTTTHHHHHHHHHHHHHT
T ss_pred ccchHHHHHHHHHHHHHHHc
Confidence 444455555555444443
No 161
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.10 E-value=0.0057 Score=53.79 Aligned_cols=106 Identities=10% Similarity=0.017 Sum_probs=79.7
Q ss_pred HHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHH
Q psy5931 4 QFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEF 82 (173)
Q Consensus 4 ~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~ 82 (173)
..|.+..+.|-++-|+..+.+...+ |+- .+++ ...+.||+++ +++.++++..+..--. .+..++.
T Consensus 11 ~lg~~~~~~g~~~~A~~~~~~Al~~~p~~--~~~~---~~lg~~~~~~------g~~~~A~~~~~~al~l---~p~~~~~ 76 (477)
T 1wao_1 11 TQANDYFKAKDYENAIKFYSQAIELNPSN--AIYY---GNRSLAYLRT------ECYGYALGDATRAIEL---DKKYIKG 76 (477)
T ss_dssp SSSSSTTTTTCHHHHHHHHHHHHHHCTTC--HHHH---HHHHHHHHHT------TCHHHHHHHHHHHHHS---CTTCHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhCCcc--HHHH---HHHHHHHHHh------cCHHHHHHHHHHHHHh---CCCCHHH
Confidence 3455667788889999998886553 322 2333 3457888875 4677777766554331 3556889
Q ss_pred HHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHh
Q psy5931 83 YALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDY 123 (173)
Q Consensus 83 ~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~ 123 (173)
+...|..+.++|++++|.+.|..|++++|+.+.+|...|..
T Consensus 77 ~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~ 117 (477)
T 1wao_1 77 YYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQEC 117 (477)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999988888877765
No 162
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=96.10 E-value=0.072 Score=42.37 Aligned_cols=133 Identities=9% Similarity=-0.061 Sum_probs=78.7
Q ss_pred HHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHH-HHHHhhhhccCChhHHHHHHHHhhhc---cccCCCchhh
Q psy5931 5 FGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQ-VKCYLQMAALDGKNQLQEGLEVIEHT---NLKYLTKEMT 79 (173)
Q Consensus 5 fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq-~kc~l~~~~~~~~~el~~gL~vi~~t---nl~~F~~~qk 79 (173)
-+......|-++.++..+.+.... |..+....+...... +.++.. .+++.++++.++.. ......+...
T Consensus 81 ~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~A~~~~~~al~~~~~~~~~~~~ 154 (293)
T 2qfc_A 81 QVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLK------KVDYEYCILELKKLLNQQLTGIDVYQN 154 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHT------SSCHHHHHHHHHHHHTTCCCSSCTTHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHHHhcCCchHHH
Confidence 345556777777787777765443 233322223332221 223332 23455665554332 1122344557
Q ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHccch---h----hHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHH
Q psy5931 80 AEFYALKGMLLAQIGRSAEANKAFSAAVQMHD---V----MVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMH 152 (173)
Q Consensus 80 aE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~---~----~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLq 152 (173)
+..+...|.++..+|++++|...|..|+.+.. . .+.++..-|..+..+-. -..|+.+|-+
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~-------------y~~Al~~~~k 221 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSR-------------YEESLYQVNK 221 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTC-------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhh-------------HHHHHHHHHH
Confidence 88999999999999999999999999995532 2 22577777776655431 2446666666
Q ss_pred Hchh
Q psy5931 153 ACRH 156 (173)
Q Consensus 153 A~~~ 156 (173)
|+..
T Consensus 222 al~~ 225 (293)
T 2qfc_A 222 AIEI 225 (293)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 163
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.06 E-value=0.22 Score=38.42 Aligned_cols=143 Identities=13% Similarity=0.045 Sum_probs=81.0
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
...+|.+....|-++-++..+.+.-. |.-+ ++. ...+.+|..-.. ...++.++++..+..--. ..++
T Consensus 9 ~~~lg~~~~~~~~~~~A~~~~~~a~~-~~~~--~a~---~~lg~~~~~g~~--~~~~~~~A~~~~~~a~~~-----~~~~ 75 (273)
T 1ouv_A 9 LVGLGAKSYKEKDFTQAKKYFEKACD-LKEN--SGC---FNLGVLYYQGQG--VEKNLKKAASFYAKACDL-----NYSN 75 (273)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH-TTCH--HHH---HHHHHHHHHTSS--SCCCHHHHHHHHHHHHHT-----TCHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHH-CCCH--HHH---HHHHHHHHcCCC--cCCCHHHHHHHHHHHHHC-----CCHH
Confidence 35677778888888888888888665 3221 232 334566665100 013344555544433111 1456
Q ss_pred HHHHHHHHHHH----hCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 82 FYALKGMLLAQ----IGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 82 ~~~LKG~fl~~----Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
.+...|.++.. .|++++|.+.|..|+... .+.+|..-|.....-..... --..|+.+|-+|+..
T Consensus 76 a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~---------~~~~A~~~~~~a~~~- 143 (273)
T 1ouv_A 76 GCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTR---------DFKKAVEYFTKACDL- 143 (273)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCC---------CHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCccc---------CHHHHHHHHHHHHhc-
Confidence 67777888877 888888888888887773 56777777776655211110 124566666666655
Q ss_pred CCchhhhhHHHH
Q psy5931 158 KESMSRKYLAKV 169 (173)
Q Consensus 158 ~~~k~Rk~laRi 169 (173)
++..+.-.++.+
T Consensus 144 ~~~~a~~~lg~~ 155 (273)
T 1ouv_A 144 NDGDGCTILGSL 155 (273)
T ss_dssp TCHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 244444444433
No 164
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=96.01 E-value=0.008 Score=50.10 Aligned_cols=114 Identities=11% Similarity=0.025 Sum_probs=65.5
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcC-CCCCc-------HHHHHHH-----HHHHHHHHhhhhccCChhHHHHHHHHhhhc
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYT-IPSVP-------IVDCFEK-----IRQQVKCYLQMAALDGKNQLQEGLEVIEHT 69 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~-lp~i~-------v~daF~K-----lrEq~kc~l~~~~~~~~~el~~gL~vi~~t 69 (173)
...|.+..+.|-++-++..+.+... .|.-. ..++... ....+.||+.+ +++.++++.++..
T Consensus 183 ~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~------g~~~~A~~~~~~a 256 (338)
T 2if4_A 183 KMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKL------KRYDEAIGHCNIV 256 (338)
T ss_dssp HHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTT------TCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHc------CCHHHHHHHHHHH
Confidence 3456777788888888888888544 33221 1122222 22346677664 4566666666544
Q ss_pred cccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHH
Q psy5931 70 NLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYME 125 (173)
Q Consensus 70 nl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d 125 (173)
-- ..+..++.+..+|..+..+|++++|.+.|..|+.++|+.+.+|...+....
T Consensus 257 l~---~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 257 LT---EEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp HH---HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred HH---hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 22 134567889999999999999999999999999999999999987776644
No 165
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=95.98 E-value=0.013 Score=47.18 Aligned_cols=79 Identities=11% Similarity=0.000 Sum_probs=61.9
Q ss_pred hhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 78 MTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 78 qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
..++.+..+|..+.+.|++++|...|..|+.++|+.+.+|..-|.....+-. -..|+..|-+|+..+
T Consensus 2 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~-------------~~~A~~~~~~al~~~ 68 (281)
T 2c2l_A 2 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQ-------------PEQALADCRRALELD 68 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC-------------HHHHHHHHHHHTTSC
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcC-------------HHHHHHHHHHHHHhC
Confidence 3578899999999999999999999999999999999999999988776531 356888888888764
Q ss_pred C-CchhhhhHHHH
Q psy5931 158 K-ESMSRKYLAKV 169 (173)
Q Consensus 158 ~-~~k~Rk~laRi 169 (173)
. +.++.-.++.+
T Consensus 69 p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 69 GQSVKAHFFLGQC 81 (281)
T ss_dssp TTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 2 23344444433
No 166
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=95.85 E-value=0.071 Score=46.08 Aligned_cols=112 Identities=10% Similarity=0.106 Sum_probs=65.3
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEF 82 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~ 82 (173)
..+|.+-.+.|-++-+...+.+.-.+|......++... +.++... +++.++.++++..--. ++....+
T Consensus 325 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~---~~~~~~~------~~~~~A~~~~~~Al~~---~~~~~~~ 392 (530)
T 2ooe_A 325 FAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQY---MKFARRA------EGIKSGRMIFKKARED---ARTRHHV 392 (530)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHH---HHHHHHH------HHHHHHHHHHHHHHTC---TTCCTHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHH---HHHHHHh------cCHHHHHHHHHHHHhc---cCCchHH
Confidence 35667777788888888888887776543322333332 2333221 2344444444433111 1222344
Q ss_pred HHHHHHH-HHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHh
Q psy5931 83 YALKGML-LAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEA 126 (173)
Q Consensus 83 ~~LKG~f-l~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~ 126 (173)
+.-.|.+ ....|+.++|-+.|..|+..+|+.+..|..+|.+..+
T Consensus 393 ~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~ 437 (530)
T 2ooe_A 393 YVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSH 437 (530)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHh
Confidence 4444444 2357888888888888888888888888888877654
No 167
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=95.85 E-value=0.0095 Score=40.51 Aligned_cols=68 Identities=12% Similarity=0.111 Sum_probs=50.0
Q ss_pred HHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHH
Q psy5931 41 RQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAW 117 (173)
Q Consensus 41 rEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW 117 (173)
...+.||+++ +++.++++.++..--. .+...+.+...|..+.++|++++|.+.|..|+.+.+..+..+
T Consensus 11 ~~lg~~~~~~------g~~~~A~~~~~~al~~---~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~ 78 (100)
T 3ma5_A 11 YALAQEHLKH------DNASRALALFEELVET---DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQK 78 (100)
T ss_dssp HHHHHHHHHT------TCHHHHHHHHHHHHHH---STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHc------CCHHHHHHHHHHHHHh---CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchh
Confidence 3457788774 4566666666554221 234556899999999999999999999999999988654433
No 168
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=95.72 E-value=0.036 Score=43.24 Aligned_cols=66 Identities=12% Similarity=-0.090 Sum_probs=54.1
Q ss_pred hhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchh-------hHH-----HHHHHHHhHHhhcCCCCCCCCCchhhhHHH
Q psy5931 78 MTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDV-------MVK-----AWALWGDYMEAQFTNPSPPGSAPNMVLGVF 145 (173)
Q Consensus 78 qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~-------~~k-----aW~~WG~~~d~~f~~~~~~~~~~~~~~~~~ 145 (173)
..|+.+.-+|..+.++|++++|-..|..|+.++|+ ... +|..=|.-+.++- --..
T Consensus 9 ~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lg-------------r~~e 75 (159)
T 2hr2_A 9 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLR-------------SFDE 75 (159)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTT-------------CHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCC-------------CHHH
Confidence 36788889999999999999999999999999999 333 7777776666653 1356
Q ss_pred HHHHHHHHchh
Q psy5931 146 AVTCFMHACRH 156 (173)
Q Consensus 146 Ai~CyLqA~~~ 156 (173)
|+.||-+|+..
T Consensus 76 Al~~~~kAL~l 86 (159)
T 2hr2_A 76 ALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999987
No 169
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=95.65 E-value=0.12 Score=41.71 Aligned_cols=133 Identities=14% Similarity=0.026 Sum_probs=76.3
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC-CCC-cHHHHHHHHHHHHHHHhhhhccCCh--hHHHHHHHHhhhccccCCCchh
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI-PSV-PIVDCFEKIRQQVKCYLQMAALDGK--NQLQEGLEVIEHTNLKYLTKEM 78 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l-p~i-~v~daF~KlrEq~kc~l~~~~~~~~--~el~~gL~vi~~tnl~~F~~~q 78 (173)
+.+|.+-++.|-++-++..+.+-..+ +.. ....+-.-+..-+.+|.. .+.+. .-++.++++....+ .+..
T Consensus 80 ~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~--g~~~~A~~~~~~Al~~~~~~~----~~~~ 153 (307)
T 2ifu_A 80 EQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP--LDLSKAVHLYQQAAAVFENEE----RLRQ 153 (307)
T ss_dssp HHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHHHHHTT----CHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhCC----ChhH
Confidence 45566666777777676666653221 000 001111122233444433 11111 11566666655432 2345
Q ss_pred hHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhH------HHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHH
Q psy5931 79 TAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMV------KAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMH 152 (173)
Q Consensus 79 kaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~------kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLq 152 (173)
.++.+...|.++.++|++++|-..|..|+.+.+..+ .+|..-|.....+ .+ -..|+.+|-+
T Consensus 154 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~--g~-----------~~~A~~~~~~ 220 (307)
T 2ifu_A 154 AAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHR--AD-----------YVAAQKCVRE 220 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TC-----------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHc--CC-----------HHHHHHHHHH
Confidence 688999999999999999999999999999877543 3444444433322 11 3567777777
Q ss_pred Hc
Q psy5931 153 AC 154 (173)
Q Consensus 153 A~ 154 (173)
+.
T Consensus 221 al 222 (307)
T 2ifu_A 221 SY 222 (307)
T ss_dssp HT
T ss_pred Hh
Confidence 77
No 170
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.62 E-value=0.19 Score=38.84 Aligned_cols=78 Identities=14% Similarity=0.070 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHH----hCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHch
Q psy5931 80 AEFYALKGMLLAQ----IGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACR 155 (173)
Q Consensus 80 aE~~~LKG~fl~~----Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~ 155 (173)
++.+..-|.++.. .|++++|-+.|..|+...| +.++..-|....+-..... + -..|+.+|-+|+.
T Consensus 182 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a~~~l~~~~~~g~~~~~------~---~~~A~~~~~~a~~ 250 (273)
T 1ouv_A 182 SPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GGGCFNLGAMQYNGEGVTR------N---EKQAIENFKKGCK 250 (273)
T ss_dssp HHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHTTSSSSC------C---STTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHHHHHHHHHHHcCCCccc------C---HHHHHHHHHHHHH
Confidence 4566777888888 8888888888888888866 6666666666554110010 0 1348888888888
Q ss_pred hCCCchhhhhHHHH
Q psy5931 156 HQKESMSRKYLAKV 169 (173)
Q Consensus 156 ~~~~~k~Rk~laRi 169 (173)
. ++..+...+.++
T Consensus 251 ~-~~~~a~~~l~~~ 263 (273)
T 1ouv_A 251 L-GAKGACDILKQL 263 (273)
T ss_dssp H-TCHHHHHHHHTC
T ss_pred c-CCHHHHHHHHHH
Confidence 8 566666665543
No 171
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=95.56 E-value=0.12 Score=35.69 Aligned_cols=90 Identities=13% Similarity=0.112 Sum_probs=62.5
Q ss_pred CcHHHHHHHHHHHHHHHhhhhccCC-hhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHcc
Q psy5931 31 VPIVDCFEKIRQQVKCYLQMAALDG-KNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQM 109 (173)
Q Consensus 31 i~v~daF~KlrEq~kc~l~~~~~~~-~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql 109 (173)
+...||| +-+.-++++..-.. ..-++++++..+..+- ....+++++..=|..+.++|+.++|...|..|+.+
T Consensus 3 Lsa~dc~----~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~---~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 3 LTAEDCF----ELGKVAYTEADYYHTELWMEQALRQLDEGEI---STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp CCHHHHH----HHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC---CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHH----HHHHHHHHccchHHHHHHHHHHHHhhhccCC---CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 4566666 44555555311100 1116666666654432 24567888888899999999999999999999999
Q ss_pred chhhHHHHHHHHHhHHhhc
Q psy5931 110 HDVMVKAWALWGDYMEAQF 128 (173)
Q Consensus 110 ~~~~~kaW~~WG~~~d~~f 128 (173)
.|+.+.+....+ +.+++.
T Consensus 76 ~P~~~~~~~n~~-~~~~~~ 93 (104)
T 2v5f_A 76 DPEHQRANGNLK-YFEYIM 93 (104)
T ss_dssp CTTCHHHHHHHH-HHHHHH
T ss_pred CCCCHHHHhhHH-HHHHHH
Confidence 999999988887 445443
No 172
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=95.19 E-value=0.062 Score=46.44 Aligned_cols=113 Identities=12% Similarity=0.062 Sum_probs=75.1
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHH-HHhhhhccCChhHHHHHHHHhhhccccCCCchhhH
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVK-CYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTA 80 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~k-c~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qka 80 (173)
.+.++.+-+++|-.+-+...+.+-...|... .+.+.. .+. ++... ++..++..+.+..- .. .+..+
T Consensus 359 ~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~-~~~~~~---~a~~~~~~~------~~~~~A~~~~e~al-~~--~p~~~ 425 (530)
T 2ooe_A 359 YIQYMKFARRAEGIKSGRMIFKKAREDARTR-HHVYVT---AALMEYYCS------KDKSVAFKIFELGL-KK--YGDIP 425 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCTTCC-THHHHH---HHHHHHHHT------CCHHHHHHHHHHHH-HH--HTTCH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhccCCc-hHHHHH---HHHHHHHHc------CChhHHHHHHHHHH-HH--CCCCH
Confidence 3567778888888888999999987766432 222221 111 22221 12333443333221 11 24557
Q ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHccchhh----HHHHHHHHHhHHhh
Q psy5931 81 EFYALKGMLLAQIGRSAEANKAFSAAVQMHDVM----VKAWALWGDYMEAQ 127 (173)
Q Consensus 81 E~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~----~kaW~~WG~~~d~~ 127 (173)
+++..-|.++.++|+.++|-..|..|++..|.. ...|..|..|....
T Consensus 426 ~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~~ 476 (530)
T 2ooe_A 426 EYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNI 476 (530)
T ss_dssp HHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHc
Confidence 899999999999999999999999999986543 45999999996654
No 173
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=95.17 E-value=0.099 Score=40.66 Aligned_cols=81 Identities=15% Similarity=0.075 Sum_probs=62.8
Q ss_pred HHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHH
Q psy5931 43 QVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGD 122 (173)
Q Consensus 43 q~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~ 122 (173)
.+-|+... ..+.+.++|+.+++..-=+. .|+++.+-++.-|....++|++++|-+.|.++++++|....+-..-..
T Consensus 38 ya~~Lv~S---~~~~~~~~gI~lLe~ll~~~-~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ 113 (152)
T 1pc2_A 38 YAWCLVRS---KYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERL 113 (152)
T ss_dssp HHHHHHTC---SSHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHcC---CCHHHHHHHHHHHHHHHhcC-CccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45566553 24678999998888754433 355889999999999999999999999999999999987777765555
Q ss_pred hHHhh
Q psy5931 123 YMEAQ 127 (173)
Q Consensus 123 ~~d~~ 127 (173)
+-+++
T Consensus 114 ie~~~ 118 (152)
T 1pc2_A 114 IDKAM 118 (152)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 174
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=94.73 E-value=0.047 Score=37.06 Aligned_cols=65 Identities=15% Similarity=0.098 Sum_probs=48.5
Q ss_pred HHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhH
Q psy5931 41 RQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMV 114 (173)
Q Consensus 41 rEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~ 114 (173)
...+.+|+.. +++.++++.++..-- ..+..++.+...|.++.++|++++|...|..|+.+.|..+
T Consensus 23 ~~lg~~~~~~------g~~~~A~~~~~~al~---~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 87 (115)
T 2kat_A 23 FTLGKTYAEH------EQFDAALPHLRAALD---FDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRG 87 (115)
T ss_dssp HHHHHHHHHT------TCHHHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHc------cCHHHHHHHHHHHHH---HCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccc
Confidence 3457777774 456666666554322 1345578899999999999999999999999999988644
No 175
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.18 E-value=0.19 Score=41.16 Aligned_cols=78 Identities=13% Similarity=0.072 Sum_probs=57.1
Q ss_pred HHHHhhhhccCChhHHHHHHHHhhhccc---cCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHH
Q psy5931 44 VKCYLQMAALDGKNQLQEGLEVIEHTNL---KYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALW 120 (173)
Q Consensus 44 ~kc~l~~~~~~~~~el~~gL~vi~~tnl---~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~W 120 (173)
+++|.+. +++.+++++++..-- ..-.++.+++++.+-|.++..+|++++|...|..|..+.+..+..+..+
T Consensus 142 a~~~~~~------g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 215 (434)
T 4b4t_Q 142 ATLHYQK------KQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTV 215 (434)
T ss_dssp HHHHHHH------TCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHc------cChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHH
Confidence 5556553 567788877765321 1224688999999999999999999999999999998877655555555
Q ss_pred HHhHHhh
Q psy5931 121 GDYMEAQ 127 (173)
Q Consensus 121 G~~~d~~ 127 (173)
|.+...+
T Consensus 216 ~~~~~~~ 222 (434)
T 4b4t_Q 216 AELDLMS 222 (434)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554443
No 176
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=93.72 E-value=0.64 Score=39.11 Aligned_cols=101 Identities=9% Similarity=-0.091 Sum_probs=60.4
Q ss_pred HHHHHhCCChHHHHHHHHhhcCCCCCcH--HHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHH
Q psy5931 6 GKIARKHHLTSVCLDSLFRLYTIPSVPI--VDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFY 83 (173)
Q Consensus 6 a~iARkh~l~~vc~~~L~ki~~lp~i~v--~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~ 83 (173)
|.++-+-+=.+-++..|.+....| -|. .+++..+ ..++.++ +.+.++++-.+...-.--.|...++..
T Consensus 142 a~l~~~~~r~~dA~~~l~~a~~~~-d~~~~~~a~~~L---G~al~~L------G~~~eAl~~l~~a~~g~~~P~~~~da~ 211 (282)
T 4f3v_A 142 AVVYGAAERWTDVIDQVKSAGKWP-DKFLAGAAGVAH---GVAAANL------ALFTEAERRLTEANDSPAGEACARAIA 211 (282)
T ss_dssp HHHHHHTTCHHHHHHHHTTGGGCS-CHHHHHHHHHHH---HHHHHHT------TCHHHHHHHHHHHHTSTTTTTTHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHhhccC-CcccHHHHHHHH---HHHHHHC------CCHHHHHHHHHHHhcCCCCccccHHHH
Confidence 445555555556666666554443 221 1223222 2233332 346666666665543221133377777
Q ss_pred HHHHHHHHHhCCchHHHHHHHHHHccchhhHHHH
Q psy5931 84 ALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAW 117 (173)
Q Consensus 84 ~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW 117 (173)
.-+|+.+.++|+.|||...|..++..+|. +++|
T Consensus 212 ~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~ 244 (282)
T 4f3v_A 212 WYLAMARRSQGNESAAVALLEWLQTTHPE-PKVA 244 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHH
Confidence 88888888888888888888888888888 7766
No 177
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=93.61 E-value=0.45 Score=38.91 Aligned_cols=104 Identities=10% Similarity=0.068 Sum_probs=72.8
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCC----CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCch
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTI----PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKE 77 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~l----p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~ 77 (173)
...+|.+-.+.|-++-++..+.+...+ ++.+....+ .--...|.+.. +...+.++++.++..+. .+
T Consensus 264 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~---~~l~~ly~~~~---~~~~~~~al~~~~~~~~----~~ 333 (378)
T 3q15_A 264 LFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELF---LFLQAVYKETV---DERKIHDLLSYFEKKNL----HA 333 (378)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHHHH---HHHHHHHSSSC---CHHHHHHHHHHHHHTTC----HH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH---HHHHHHHhCCC---cHHHHHHHHHHHHhCCC----hh
Confidence 456788888888888888888775443 222222222 22222333321 12448899999988664 56
Q ss_pred hhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHH
Q psy5931 78 MTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVK 115 (173)
Q Consensus 78 qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~k 115 (173)
...+++..-|.++.+.|++++|.+.|..|+.+.+...+
T Consensus 334 ~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~~~~ 371 (378)
T 3q15_A 334 YIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILK 371 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhc
Confidence 77889999999999999999999999999998766443
No 178
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=93.38 E-value=0.34 Score=43.79 Aligned_cols=66 Identities=6% Similarity=-0.016 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHHHhC--CchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 79 TAEFYALKGMLLAQIG--RSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 79 kaE~~~LKG~fl~~Lg--~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
....|..||.++.++| +.++|-..|..++.++|....+|..-|..+.++-. .-+.|+.+|-+++..
T Consensus 106 ~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~------------~~~~el~~~~~~I~~ 173 (567)
T 1dce_A 106 SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAV------------APAEELAFTDSLITR 173 (567)
T ss_dssp CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCC------------CHHHHHHHHHTTTTT
T ss_pred CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCC------------ChHHHHHHHHHHHHH
Confidence 3344445555555555 22555555555555555545555444444433310 124566666666665
No 179
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=93.30 E-value=0.18 Score=40.05 Aligned_cols=76 Identities=12% Similarity=0.122 Sum_probs=54.4
Q ss_pred HHHHHHHHhhhhccCChhHHHHH-HHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHH
Q psy5931 40 IRQQVKCYLQMAALDGKNQLQEG-LEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKA 116 (173)
Q Consensus 40 lrEq~kc~l~~~~~~~~~el~~g-L~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~ka 116 (173)
+++|++-.+...-. +..++-.. |--+.+.|-+-++++++++.+.+-|..+..-|++-.|...|.+|+++....+|.
T Consensus 23 l~dqik~L~d~~LY-~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 23 VIDHVRDMAAAGLH-SNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp HHHHHHHHHHTTCH-HHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHhhhH-HHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 56777766653111 11222222 223355677889999999999999999999999999999999999998866544
No 180
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=93.21 E-value=2.7 Score=33.67 Aligned_cols=118 Identities=8% Similarity=-0.096 Sum_probs=72.9
Q ss_pred HHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccC-ChhHHHHHHHHhhhccccCCCchhhHH
Q psy5931 4 QFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALD-GKNQLQEGLEVIEHTNLKYLTKEMTAE 81 (173)
Q Consensus 4 ~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~-~~~el~~gL~vi~~tnl~~F~~~qkaE 81 (173)
..|.++...|-++.++..+.+...+ |.-+......-+...+.+|....... ...-+.+++++-...+- +...+.
T Consensus 19 ~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~----~~~~~~ 94 (373)
T 1hz4_A 19 LRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDV----WHYALW 94 (373)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC----HHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCc----HHHHHH
Confidence 4577888899999999998885443 32221111222334455665532110 01115556665554332 345566
Q ss_pred HHHHHHHHHHHhCCchHHHHHHHHHHccch--------hhHHHHHHHHHhHH
Q psy5931 82 FYALKGMLLAQIGRSAEANKAFSAAVQMHD--------VMVKAWALWGDYME 125 (173)
Q Consensus 82 ~~~LKG~fl~~Lg~~deA~~~F~~Avql~~--------~~~kaW~~WG~~~d 125 (173)
.+...|.++...|++++|...|..++.+.+ ..+.++...|....
T Consensus 95 ~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 146 (373)
T 1hz4_A 95 SLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLW 146 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHH
Confidence 778899999999999999999999999864 34455555555443
No 181
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=92.62 E-value=2.2 Score=32.29 Aligned_cols=98 Identities=13% Similarity=0.106 Sum_probs=54.9
Q ss_pred HHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHH----hCCchHHHHHHHHHHccch--hhHHHHHHHHHhHHhhcCCC
Q psy5931 58 QLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQ----IGRSAEANKAFSAAVQMHD--VMVKAWALWGDYMEAQFTNP 131 (173)
Q Consensus 58 el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~----Lg~~deA~~~F~~Avql~~--~~~kaW~~WG~~~d~~f~~~ 131 (173)
++.++++.++.. . ....++-...-|.++.. .++.++|-+.|..|+...+ ..+.++..-|.....-....
T Consensus 68 ~~~~A~~~~~~A-~----~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~ 142 (212)
T 3rjv_A 68 DYPQARQLAEKA-V----EAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGP 142 (212)
T ss_dssp CHHHHHHHHHHH-H----HTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSS
T ss_pred CHHHHHHHHHHH-H----HCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCC
Confidence 455555555444 1 12234445555666665 6777888888888888777 45777777777765532111
Q ss_pred CCCCCCchhhhHHHHHHHHHHHchhCCCchhhhhHHHH
Q psy5931 132 SPPGSAPNMVLGVFAVTCFMHACRHQKESMSRKYLAKV 169 (173)
Q Consensus 132 ~~~~~~~~~~~~~~Ai~CyLqA~~~~~~~k~Rk~laRi 169 (173)
. =-..|+..|-+|+...++..+.-.|+.+
T Consensus 143 ~---------d~~~A~~~~~~A~~~~~~~~a~~~Lg~~ 171 (212)
T 3rjv_A 143 E---------DDVKASEYFKGSSSLSRTGYAEYWAGMM 171 (212)
T ss_dssp C---------CHHHHHHHHHHHHHTSCTTHHHHHHHHH
T ss_pred C---------CHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 0 0244666666666553344444444443
No 182
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=91.53 E-value=0.92 Score=34.16 Aligned_cols=72 Identities=15% Similarity=0.043 Sum_probs=57.2
Q ss_pred ChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 55 GKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 55 ~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
.+.+.++|+.+++..==+. .|+++-|-++.=|..+.|+|++++|-+.+...++++|....|...-...-+++
T Consensus 50 ~~~d~~~GI~lLe~l~~~~-~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i 121 (126)
T 1nzn_A 50 YNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 121 (126)
T ss_dssp SHHHHHHHHHHHHHHTTTS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 4778999999998743321 25588899999999999999999999999999999998887776544444433
No 183
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=91.48 E-value=0.86 Score=38.27 Aligned_cols=108 Identities=5% Similarity=-0.021 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHhhhhccCChhHH-HHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhC--CchHHHHHHHHHHccc
Q psy5931 34 VDCFEKIRQQVKCYLQMAALDGKNQL-QEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIG--RSAEANKAFSAAVQMH 110 (173)
Q Consensus 34 ~daF~KlrEq~kc~l~~~~~~~~~el-~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg--~~deA~~~F~~Avql~ 110 (173)
+|.|..+...+...++. +|+ .++|+..+..-. -.+.-...+..||.++..+| +.++|-+.+..++.++
T Consensus 29 ~~~y~~~~~~~~a~~~~------~e~s~~aL~~t~~~L~---~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~n 99 (306)
T 3dra_A 29 DEDYKQIMGLLLALMKA------EEYSERALHITELGIN---ELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDN 99 (306)
T ss_dssp CHHHHHHHHHHHHHHHT------TCCSHHHHHHHHHHHH---HCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHc------CCCCHHHHHHHHHHHH---HCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHC
Confidence 67777777777777764 332 366666655443 35566788999999999999 9999999999999999
Q ss_pred hhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 111 DVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 111 ~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
|....+|..=|..+.+++..... . .-...++.++-+++..
T Consensus 100 Pk~y~aW~~R~~iL~~~~~~l~~-~-----~~~~~EL~~~~~~l~~ 139 (306)
T 3dra_A 100 EKNYQIWNYRQLIIGQIMELNNN-D-----FDPYREFDILEAMLSS 139 (306)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTTT-C-----CCTHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhccc-c-----CCHHHHHHHHHHHHHh
Confidence 99999999999999555422110 0 0125677777777655
No 184
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=91.22 E-value=0.81 Score=39.15 Aligned_cols=66 Identities=6% Similarity=-0.016 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHhCC--chHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 79 TAEFYALKGMLLAQIGR--SAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 79 kaE~~~LKG~fl~~Lg~--~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
....+..||.++.++|+ .+++-..+..++.++|....+|..=|..+.++-. ....++.++-+++..
T Consensus 107 ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~------------~~~eel~~~~~~I~~ 174 (331)
T 3dss_A 107 SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAV------------APAEELAFTDSLITR 174 (331)
T ss_dssp CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------------CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCc------------CHHHHHHHHHHHHHH
Confidence 34444455555555553 3455555555555555445555444444433210 124677777777765
No 185
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=91.18 E-value=3.2 Score=35.77 Aligned_cols=137 Identities=10% Similarity=0.039 Sum_probs=89.7
Q ss_pred HHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHH
Q psy5931 4 QFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFY 83 (173)
Q Consensus 4 ~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~ 83 (173)
.|..+-.+....+-++....++-.+ +-+--.+..--|+ ++..+ ...+.+.|+.++..-. ..+.....+
T Consensus 59 ~~r~~~~~~e~se~AL~lt~~~L~~-nP~~ytaWn~R~~---iL~~l-----~~~l~eEL~~~~~~L~---~nPKny~aW 126 (349)
T 3q7a_A 59 YFRAIAAKEEKSERALELTEIIVRM-NPAHYTVWQYRFS---LLTSL-----NKSLEDELRLMNEFAV---QNLKSYQVW 126 (349)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHH-CTTCHHHHHHHHH---HHHHT-----TCCHHHHHHHHHHHHH---TTCCCHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHh-CchhHHHHHHHHH---HHHHh-----hhhHHHHHHHHHHHHH---hCCCcHHHH
Confidence 3444455566667777777776554 2232333322222 22222 1136677777766644 344567789
Q ss_pred HHHHHHHHHh-C-CchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 84 ALKGMLLAQI-G-RSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 84 ~LKG~fl~~L-g-~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
..||.++.++ | +.+++.+.+..++..+|....+|..=+-.+.++..-++ ........++.++-+++..+
T Consensus 127 ~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~-----~~~~~~~eELe~~~k~I~~d 197 (349)
T 3q7a_A 127 HHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGR-----ISEAQWGSELDWCNEMLRVD 197 (349)
T ss_dssp HHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTC-----CCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccc-----cchhhHHHHHHHHHHHHHhC
Confidence 9999999998 8 88999999999999999999999888777777653332 12344568899998888753
No 186
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=90.87 E-value=1.5 Score=37.91 Aligned_cols=106 Identities=7% Similarity=0.034 Sum_probs=78.1
Q ss_pred CcHHHHHHHHHHHHHHHhhhhccCChhH-HHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhC-CchHHHHHHHHHHc
Q psy5931 31 VPIVDCFEKIRQQVKCYLQMAALDGKNQ-LQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIG-RSAEANKAFSAAVQ 108 (173)
Q Consensus 31 i~v~daF~KlrEq~kc~l~~~~~~~~~e-l~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg-~~deA~~~F~~Avq 108 (173)
|--.+.|..+-...+..++. .| -.++|+..+..-. ..+.....+..||.++..+| +.++|-+.+..++.
T Consensus 47 i~y~~~y~~~~~~~r~~~~~------~e~se~AL~lt~~~L~---~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~ 117 (349)
T 3q7a_A 47 IMYSEEYKDAMDYFRAIAAK------EEKSERALELTEIIVR---MNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAV 117 (349)
T ss_dssp BCCCHHHHHHHHHHHHHHHT------TCCSHHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred eeeCHHHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHH---hCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 33445666666666655553 22 2356666655543 34556788999999999999 59999999999999
Q ss_pred cchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 109 MHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 109 l~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
.+|....+|..=|..+.+++...+ ..++.++-+++..
T Consensus 118 ~nPKny~aW~hR~wlL~~l~~~~~-----------~~EL~~~~k~L~~ 154 (349)
T 3q7a_A 118 QNLKSYQVWHHRLLLLDRISPQDP-----------VSEIEYIHGSLLP 154 (349)
T ss_dssp TTCCCHHHHHHHHHHHHHHCCSCC-----------HHHHHHHHHHTSS
T ss_pred hCCCcHHHHHHHHHHHHHhcCCCh-----------HHHHHHHHHHHHh
Confidence 999999999999999998854232 4788888888865
No 187
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=90.24 E-value=6.8 Score=32.76 Aligned_cols=128 Identities=10% Similarity=0.007 Sum_probs=83.7
Q ss_pred HHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHH
Q psy5931 5 FGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYA 84 (173)
Q Consensus 5 fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~ 84 (173)
+|..--..|=++-+...|..+-... | .+. ..--.+..+++ .+++.+++..++.. +.+=.+.+..+.+.
T Consensus 108 yA~~L~~~g~y~eA~~~l~~~~~~~--p-~~~--~~~~~a~l~~~------~~r~~dA~~~l~~a-~~~~d~~~~~~a~~ 175 (282)
T 4f3v_A 108 FAACEAAQGNYADAMEALEAAPVAG--S-EHL--VAWMKAVVYGA------AERWTDVIDQVKSA-GKWPDKFLAGAAGV 175 (282)
T ss_dssp HHHHHHHHTCHHHHHHHHTSSCCTT--C-HHH--HHHHHHHHHHH------TTCHHHHHHHHTTG-GGCSCHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcC--C-chH--HHHHHHHHHHH------cCCHHHHHHHHHHh-hccCCcccHHHHHH
Confidence 3444445677888888887764321 1 222 11112224444 35688888888744 33323445678899
Q ss_pred HHHHHHHHhCCchHHHHHHHHHHccc--hh-hHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhC
Q psy5931 85 LKGMLLAQIGRSAEANKAFSAAVQMH--DV-MVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 85 LKG~fl~~Lg~~deA~~~F~~Avql~--~~-~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
..|..+..+|++++|...|..++.-. |. .+.+|..=|.-+.++-.. ..|..+|=++....
T Consensus 176 ~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~-------------deA~~~l~~a~a~~ 238 (282)
T 4f3v_A 176 AHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNE-------------SAAVALLEWLQTTH 238 (282)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCH-------------HHHHHHHHHHHHHS
T ss_pred HHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCH-------------HHHHHHHHHHHhcC
Confidence 99999999999999999999998554 55 667888888887777533 34777776665553
No 188
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=89.11 E-value=6.1 Score=31.54 Aligned_cols=117 Identities=8% Similarity=-0.036 Sum_probs=71.3
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC---CCCcHHHHHHHHH--HHHHHHhhhhccCChhHHHHHHHHhhhccccCCCc-
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI---PSVPIVDCFEKIR--QQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTK- 76 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l---p~i~v~daF~Klr--Eq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~- 76 (173)
..+|.+....|-++-+...+.+...+ +..+. .+.-.. -.+..++.. +++.++.+.++..--.....
T Consensus 178 ~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------g~~~~A~~~~~~a~~~~~~~~ 249 (373)
T 1hz4_A 178 AMLIQCSLARGDLDNARSQLNRLENLLGNGKYHS--DWISNANKVRVIYWQMT------GDKAAAANWLRHTAKPEFANN 249 (373)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCH--HHHHHHHHHHHHHHHHT------TCHHHHHHHHHHSCCCCCTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcch--hHHHHHHHHHHHHHHHC------CCHHHHHHHHHhCCCCCCCcc
Confidence 45778888888888888888875433 22221 122221 233345543 45666766665543222111
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhh------HHHHHHHHHhHHhh
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVM------VKAWALWGDYMEAQ 127 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~------~kaW~~WG~~~d~~ 127 (173)
......+...|.++...|++++|-..+..++...+.. ..++...|..+...
T Consensus 250 ~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~la~~~~~~ 306 (373)
T 1hz4_A 250 HFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQA 306 (373)
T ss_dssp GGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHh
Confidence 1223345677999999999999999999998886642 34566666655554
No 189
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=89.00 E-value=0.95 Score=40.88 Aligned_cols=54 Identities=11% Similarity=0.099 Sum_probs=46.2
Q ss_pred hhhHHHHHHHHHHHHHhC-CchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCC
Q psy5931 77 EMTAEFYALKGMLLAQIG-RSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTN 130 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg-~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~ 130 (173)
+....-|..||.++.++| .+++|-+.+..++..+|.-..||..=|..+.+++..
T Consensus 140 ~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~ 194 (567)
T 1dce_A 140 ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQ 194 (567)
T ss_dssp TTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCC
T ss_pred cccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhccc
Confidence 344566889999999999 889999999999999999999999888888887643
No 190
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=88.01 E-value=4.4 Score=41.94 Aligned_cols=112 Identities=13% Similarity=0.053 Sum_probs=80.8
Q ss_pred HHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHH
Q psy5931 5 FGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYA 84 (173)
Q Consensus 5 fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~ 84 (173)
.|.+|-.+|+++-|.....|.. .-.+|...+-|+ -+.+.+|.+..+..+. .+.|.
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~-----~~~~A~~VLie~------------i~nldrAiE~Aervn~--------p~vWs 1109 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFD-----VNTSAVQVLIEH------------IGNLDRAYEFAERCNE--------PAVWS 1109 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcC-----CHHHHHHHHHHH------------HhhHHHHHHHHHhcCC--------HHHHH
Confidence 5888899999999988888852 123333333331 2357788888876543 88999
Q ss_pred HHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCC
Q psy5931 85 LKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKE 159 (173)
Q Consensus 85 LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~ 159 (173)
..|.-+.+.|+.+||-.+|-.| ..+.+|..=|.++.+.-. -+.|+..|.+|....++
T Consensus 1110 qLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGk-------------yEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1110 QLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGN-------------WEELVKYLQMARKKARE 1166 (1630)
T ss_pred HHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCC-------------HHHHHHHHHHHHhhccc
Confidence 9999999999999999999887 557788888888777641 34577777666655443
No 191
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=87.01 E-value=3.6 Score=31.06 Aligned_cols=78 Identities=14% Similarity=0.065 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHhC----CchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 81 EFYALKGMLLAQIG----RSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 81 E~~~LKG~fl~~Lg----~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
+-+..-|.++.. | +.++|.+.|..|+.. ..+.++...|.....--... + =-..|+..|.+|+..
T Consensus 51 ~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~--g~~~a~~~Lg~~y~~g~g~~------~---d~~~A~~~~~~A~~~ 118 (212)
T 3rjv_A 51 DALALLAQLKIR-NPQQADYPQARQLAEKAVEA--GSKSGEIVLARVLVNRQAGA------T---DVAHAITLLQDAARD 118 (212)
T ss_dssp HHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHTCGGGSS------C---CHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCc------c---CHHHHHHHHHHHHHc
Confidence 444445555555 5 666666666666443 45566666665543211000 0 135577777777766
Q ss_pred CCC---chhhhhHHHHh
Q psy5931 157 QKE---SMSRKYLAKVD 170 (173)
Q Consensus 157 ~~~---~k~Rk~laRiL 170 (173)
... ..+--.|+.+.
T Consensus 119 ~~~~~~~~a~~~Lg~~y 135 (212)
T 3rjv_A 119 SESDAAVDAQMLLGLIY 135 (212)
T ss_dssp TTSHHHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHH
Confidence 322 45555555543
No 192
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.09 E-value=3 Score=33.89 Aligned_cols=106 Identities=13% Similarity=0.076 Sum_probs=69.3
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCC--CCCcHHHHHHHHHHHHHHHhhhhccCC-hhHHHHHHHHhhhccccCCCchhh
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTI--PSVPIVDCFEKIRQQVKCYLQMAALDG-KNQLQEGLEVIEHTNLKYLTKEMT 79 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~l--p~i~v~daF~KlrEq~kc~l~~~~~~~-~~el~~gL~vi~~tnl~~F~~~qk 79 (173)
+++|++-...|-++-++..|.++... ...+-.+-..=+.+++.+|+....... ..-+..++.+.++.+ -.+..+
T Consensus 139 ~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~---~~~~~~ 215 (434)
T 4b4t_Q 139 IKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIY---CPTQTV 215 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC---CCHHHH
T ss_pred HHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCC---CchHHH
Confidence 46788888889999998888875431 112212223335677888887521100 011334444433332 245678
Q ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHccch
Q psy5931 80 AEFYALKGMLLAQIGRSAEANKAFSAAVQMHD 111 (173)
Q Consensus 80 aE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~ 111 (173)
+.++..-|.++...|++++|.+.|..|+...+
T Consensus 216 ~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~ 247 (434)
T 4b4t_Q 216 AELDLMSGILHCEDKDYKTAFSYFFESFESYH 247 (434)
T ss_dssp HHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999987654
No 193
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=85.60 E-value=3 Score=34.88 Aligned_cols=90 Identities=4% Similarity=-0.068 Sum_probs=68.5
Q ss_pred HHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCch--HHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCC
Q psy5931 59 LQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSA--EANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGS 136 (173)
Q Consensus 59 l~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~d--eA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~ 136 (173)
+.+.|+.++..-- ..+.....+..||.++.++|+.+ ++-..+..++..+|.--.||..=|..+.++-...
T Consensus 126 ~~~EL~~~~~~l~---~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~----- 197 (306)
T 3dra_A 126 PYREFDILEAMLS---SDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLA----- 197 (306)
T ss_dssp THHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGC-----
T ss_pred HHHHHHHHHHHHH---hCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccc-----
Confidence 4556666655443 34556778999999999999999 9999999999999999999998888777653211
Q ss_pred CchhhhHHHHHHHHHHHchhCC
Q psy5931 137 APNMVLGVFAVTCFMHACRHQK 158 (173)
Q Consensus 137 ~~~~~~~~~Ai~CyLqA~~~~~ 158 (173)
....-..++.++-+++..+.
T Consensus 198 --~~~~~~eEl~~~~~aI~~~p 217 (306)
T 3dra_A 198 --TDNTIDEELNYVKDKIVKCP 217 (306)
T ss_dssp --CHHHHHHHHHHHHHHHHHCS
T ss_pred --hhhhHHHHHHHHHHHHHhCC
Confidence 12346779999999987643
No 194
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=83.20 E-value=14 Score=32.33 Aligned_cols=123 Identities=10% Similarity=-0.025 Sum_probs=75.3
Q ss_pred CCCCcHHHHHHHHHHHHHHHhhhhcc-CChhHHHHHHHHhhhc---cccCCCc--hhhHHHHHHHHHHHHHhCCchHHHH
Q psy5931 28 IPSVPIVDCFEKIRQQVKCYLQMAAL-DGKNQLQEGLEVIEHT---NLKYLTK--EMTAEFYALKGMLLAQIGRSAEANK 101 (173)
Q Consensus 28 lp~i~v~daF~KlrEq~kc~l~~~~~-~~~~el~~gL~vi~~t---nl~~F~~--~qkaE~~~LKG~fl~~Lg~~deA~~ 101 (173)
.|..+-.+....+.+.+++.++.... ....++.+++++.+.. ...-|.+ +..+..+..=|..+..+|++++|..
T Consensus 282 ~~~~~~~e~v~~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~ 361 (433)
T 3qww_A 282 LSSPPQAEAIRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALK 361 (433)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHH
Confidence 34444445555555555555542110 0111244444444332 1123344 4678888889999999999999999
Q ss_pred HHHHHHcc--------chhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 102 AFSAAVQM--------HDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 102 ~F~~Avql--------~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
.|..|+.+ ||..+..+..-|..+..+..-+ ....+-+.|+.-+...-+-
T Consensus 362 ~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~------eA~~~~~~Al~i~~~~lG~ 418 (433)
T 3qww_A 362 YGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKA------AGEKALKKAIAIMEVAHGK 418 (433)
T ss_dssp HHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHH------HHHHHHHHHHHHHHHHcCC
Confidence 99999977 6677788888888877776333 3445555566555554443
No 195
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=82.11 E-value=2.3 Score=39.56 Aligned_cols=51 Identities=8% Similarity=-0.081 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHHHHHhCCchHHH-HHHHHHHccchhhHHHHHHHHHhHHhhc
Q psy5931 78 MTAEFYALKGMLLAQIGRSAEAN-KAFSAAVQMHDVMVKAWALWGDYMEAQF 128 (173)
Q Consensus 78 qkaE~~~LKG~fl~~Lg~~deA~-~~F~~Avql~~~~~kaW~~WG~~~d~~f 128 (173)
..++++..-+.|+.+.|+.++|- +.|..|+..+|..+..|..|+.+.++..
T Consensus 341 ~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~ 392 (679)
T 4e6h_A 341 FAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNT 392 (679)
T ss_dssp TCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhC
Confidence 35789999999999999999996 9999999999999999999999988874
No 196
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=81.94 E-value=6 Score=33.69 Aligned_cols=83 Identities=10% Similarity=0.035 Sum_probs=63.0
Q ss_pred hhhHHHHHHHHHHHHHhCCc-hHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCC-CchhhhHHHHHHHHHHHc
Q psy5931 77 EMTAEFYALKGMLLAQIGRS-AEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGS-APNMVLGVFAVTCFMHAC 154 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~-deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~-~~~~~~~~~Ai~CyLqA~ 154 (173)
+..-.-+..||.++..+|+. +++-..+..++..+|.-..||..=|..+.++....+.+.. ......-..++.|+.+|+
T Consensus 141 prNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai 220 (331)
T 3dss_A 141 ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAF 220 (331)
T ss_dssp TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHH
Confidence 44455688899999999995 9999999999999999999999999999988754321110 011245678999999999
Q ss_pred hhCCC
Q psy5931 155 RHQKE 159 (173)
Q Consensus 155 ~~~~~ 159 (173)
..+.+
T Consensus 221 ~~~P~ 225 (331)
T 3dss_A 221 FTDPN 225 (331)
T ss_dssp HHSTT
T ss_pred HhCCC
Confidence 77543
No 197
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=81.82 E-value=4.1 Score=31.04 Aligned_cols=62 Identities=10% Similarity=0.034 Sum_probs=51.8
Q ss_pred ChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHH
Q psy5931 55 GKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWA 118 (173)
Q Consensus 55 ~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~ 118 (173)
.+.+.+.|+.+++..=- -+++.+-|.+..=|.=+-|+|++++|-+.=...+++.|....|=.
T Consensus 55 ~~~d~~~GI~LLe~l~~--~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~ 116 (134)
T 3o48_A 55 DVNDERLGVKILTDIYK--EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 116 (134)
T ss_dssp CHHHHHHHHHHHHHHHH--HCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred CHHHHHHHHHHHHHHHh--cCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHH
Confidence 46778999999876432 247789999999999999999999999999999999997665543
No 198
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=81.61 E-value=2.6 Score=37.84 Aligned_cols=99 Identities=14% Similarity=0.135 Sum_probs=73.5
Q ss_pred CCChHHHHHHHHhhcCC--C----CCc------HHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhc----cccCCC
Q psy5931 12 HHLTSVCLDSLFRLYTI--P----SVP------IVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHT----NLKYLT 75 (173)
Q Consensus 12 h~l~~vc~~~L~ki~~l--p----~i~------v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~t----nl~~F~ 75 (173)
+...|-|-+.|+|++++ + .++ =..++.=+-.-.|+|.++.+. .-...=+..|+++ +++.|+
T Consensus 139 ~~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~---~lckni~k~i~~~~~~p~~~~~p 215 (455)
T 3t5v_B 139 HQFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESP---QLCSNIFKNFQPKSMLAHFNEYQ 215 (455)
T ss_dssp THHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCC---TTHHHHHHTHHHHCCCSCGGGSC
T ss_pred hhHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCH---HHHHHHHHHhccCCCCcChhhCC
Confidence 45566788999998885 2 221 122455556667999987432 2244445556665 568999
Q ss_pred chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHcc-chhh
Q psy5931 76 KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQM-HDVM 113 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql-~~~~ 113 (173)
+.|+..+.+--|.+...-+++.+|++.+..|... +|..
T Consensus 216 ~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 216 LDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred ccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999999999 8853
No 199
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=80.35 E-value=14 Score=31.39 Aligned_cols=27 Identities=7% Similarity=0.101 Sum_probs=12.7
Q ss_pred CCchHHHHHHHHHHccchhhHHHHHHHHHh
Q psy5931 94 GRSAEANKAFSAAVQMHDVMVKAWALWGDY 123 (173)
Q Consensus 94 g~~deA~~~F~~Avql~~~~~kaW~~WG~~ 123 (173)
++.++|-+.|..|+ +..+.+|..-|..
T Consensus 231 ~d~~~A~~~~~~aa---~g~~~a~~~Lg~~ 257 (452)
T 3e4b_A 231 PDEKTAQALLEKIA---PGYPASWVSLAQL 257 (452)
T ss_dssp CCHHHHHHHHHHHG---GGSTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHc---CCCHHHHHHHHHH
Confidence 34444555554444 4444444444443
No 200
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=80.29 E-value=0.82 Score=36.11 Aligned_cols=37 Identities=14% Similarity=0.115 Sum_probs=33.5
Q ss_pred HHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 91 AQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 91 ~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
..+++.|+|-..|..|+++|..++|.|..++.|=-+.
T Consensus 71 ~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRq 107 (161)
T 4h7y_A 71 KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQ 107 (161)
T ss_dssp HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHT
T ss_pred HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 5669999999999999999999999999999986664
No 201
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=79.48 E-value=2.4 Score=33.64 Aligned_cols=43 Identities=9% Similarity=-0.058 Sum_probs=37.8
Q ss_pred cCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhH
Q psy5931 72 KYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMV 114 (173)
Q Consensus 72 ~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~ 114 (173)
+.|+..|...+.+.-|.+...-+++.+|.+.|..|...+|..+
T Consensus 6 ~~~~~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 6 DDYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp ---CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 6899999999999999999999999999999999999998644
No 202
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=76.73 E-value=18 Score=37.49 Aligned_cols=40 Identities=13% Similarity=0.073 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhH
Q psy5931 80 AEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYM 124 (173)
Q Consensus 80 aE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~ 124 (173)
+.-|.-.|..+.++|++++|-.+|..| ..+++|.+|+.-|
T Consensus 1221 A~ny~rLA~tLvkLge~q~AIEaarKA-----~n~~aWkev~~ac 1260 (1630)
T 1xi4_A 1221 VSNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFAC 1260 (1630)
T ss_pred hhHHHHHHHHHHHhCCHHHHHHHHHHh-----CCHHHHHHHHHHH
Confidence 456677778888888888888888888 3459999999888
No 203
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=76.23 E-value=15 Score=34.19 Aligned_cols=113 Identities=7% Similarity=0.028 Sum_probs=73.5
Q ss_pred hhHHHHHHHhCCChHHHHHHHHhhcCC-CCCcHHHHHHHHHHHHHHHhhhhccCCh--hHHHHHHHHhhhccccCCCchh
Q psy5931 2 IIQFGKIARKHHLTSVCLDSLFRLYTI-PSVPIVDCFEKIRQQVKCYLQMAALDGK--NQLQEGLEVIEHTNLKYLTKEM 78 (173)
Q Consensus 2 ~~~fa~iARkh~l~~vc~~~L~ki~~l-p~i~v~daF~KlrEq~kc~l~~~~~~~~--~el~~gL~vi~~tnl~~F~~~q 78 (173)
.+.+++..|++|-.+.|...+.+.-.. |... .+.|++. +.-......+.+. +=+..||+. |. .
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~-~~lyi~~---A~lE~~~~~d~e~Ar~ife~~Lk~--------~p--~ 502 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVT-PDIYLEN---AYIEYHISKDTKTACKVLELGLKY--------FA--T 502 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSC-THHHHHH---HHHHHTTTSCCHHHHHHHHHHHHH--------HT--T
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCC-hHHHHHH---HHHHHHhCCCHHHHHHHHHHHHHH--------CC--C
Confidence 356778888887778888888886554 4322 2444422 2111111100001 114566653 22 2
Q ss_pred hHHHHHHHHHHHHHhCCchHHHHHHHHHHccch---hhHHHHHHHHHhHHhhc
Q psy5931 79 TAEFYALKGMLLAQIGRSAEANKAFSAAVQMHD---VMVKAWALWGDYMEAQF 128 (173)
Q Consensus 79 kaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~---~~~kaW~~WG~~~d~~f 128 (173)
..+++---+.|+..+|+.+.|-..|..|++..+ .....|..|.+|=.+..
T Consensus 503 ~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G 555 (679)
T 4e6h_A 503 DGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVG 555 (679)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcC
Confidence 356776777899999999999999999999988 67899999999966554
No 204
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=74.93 E-value=2.9 Score=35.89 Aligned_cols=48 Identities=13% Similarity=0.155 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHHHh-----CCchHHHHHHHHHHccchhh-HHHHHHHHHhHHh
Q psy5931 79 TAEFYALKGMLLAQI-----GRSAEANKAFSAAVQMHDVM-VKAWALWGDYMEA 126 (173)
Q Consensus 79 kaE~~~LKG~fl~~L-----g~~deA~~~F~~Avql~~~~-~kaW~~WG~~~d~ 126 (173)
...-++.-|.++.++ |+.|.|.+.|..|+.+.|+. ...+..||+|+-.
T Consensus 198 ~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~ 251 (301)
T 3u64_A 198 EGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCI 251 (301)
T ss_dssp HHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTT
T ss_pred cCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHH
Confidence 567889999999997 99999999999999999986 9999999998754
No 205
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=74.83 E-value=11 Score=32.91 Aligned_cols=69 Identities=14% Similarity=0.202 Sum_probs=49.1
Q ss_pred chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHch
Q psy5931 76 KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACR 155 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~ 155 (173)
.+.-+..+..-|..+...|+.|+|...+..|+.+.|+ .-+|..=|..... ..+ .+.|+..|-+|.+
T Consensus 273 ~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~--~G~-----------~~eA~e~~~~Alr 338 (372)
T 3ly7_A 273 LNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEM--KGM-----------NREAADAYLTAFN 338 (372)
T ss_dssp GTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHH--TTC-----------HHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHH--CCC-----------HHHHHHHHHHHHh
Confidence 3556667777777777789999999999999999875 3343333333332 222 4679999999999
Q ss_pred hCC
Q psy5931 156 HQK 158 (173)
Q Consensus 156 ~~~ 158 (173)
+..
T Consensus 339 L~P 341 (372)
T 3ly7_A 339 LRP 341 (372)
T ss_dssp HSC
T ss_pred cCC
Confidence 943
No 206
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=74.72 E-value=9.9 Score=32.37 Aligned_cols=77 Identities=14% Similarity=0.038 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHhC---CchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCC
Q psy5931 82 FYALKGMLLAQIG---RSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQK 158 (173)
Q Consensus 82 ~~~LKG~fl~~Lg---~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~ 158 (173)
-+..-|.++.+.| +.++|.+.|..|+...+..+..|..-|..+..-..... + -..|+.+|-+|+ .+
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~------d---~~~A~~~~~~aa--~g 246 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTP------D---EKTAQALLEKIA--PG 246 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSC------C---HHHHHHHHHHHG--GG
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCC------C---HHHHHHHHHHHc--CC
Confidence 5567788888899 99999999999999999999998888988754432111 1 346788888887 46
Q ss_pred CchhhhhHHHH
Q psy5931 159 ESMSRKYLAKV 169 (173)
Q Consensus 159 ~~k~Rk~laRi 169 (173)
+..+.-.|+.+
T Consensus 247 ~~~a~~~Lg~~ 257 (452)
T 3e4b_A 247 YPASWVSLAQL 257 (452)
T ss_dssp STHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 66666666665
No 207
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=73.28 E-value=15 Score=32.07 Aligned_cols=103 Identities=13% Similarity=0.083 Sum_probs=76.2
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhc--CCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccc----cCCCc
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLY--TIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNL----KYLTK 76 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~--~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl----~~F~~ 76 (173)
.++|++-...|-++-+.+.|..+. +-.+|+-.+-..-+-+|++.|+.. +++..+-..++.++. .+-.+
T Consensus 141 ~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~------~d~~~a~~~~~ki~~~~~~~~~~~ 214 (445)
T 4b4t_P 141 KDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILK------GDYSQATVLSRKILKKTFKNPKYE 214 (445)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHH------TCHHHHHHHHHHHHHHHHHSSCCH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHHHHhhcccCCcH
Confidence 367888888888888989998864 233577666666667899988874 344444444444332 34456
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccch
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHD 111 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~ 111 (173)
+-+..++.+-|.++..-+++.+|.+.|-.+....+
T Consensus 215 ~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~ 249 (445)
T 4b4t_P 215 SLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDA 249 (445)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhccc
Confidence 78999999999999999999999999998876543
No 208
>2knj_A Microplusin preprotein; antimicrobial peptide, rhipicephalus (boophilus) microplus, antimicrobial protein; NMR {Rhipicephalus microplus}
Probab=71.99 E-value=3.4 Score=29.65 Aligned_cols=43 Identities=16% Similarity=0.250 Sum_probs=29.8
Q ss_pred HHHHHHHHHhhhhccCChhHHHHHHHHhh-----------------hccc-----cCCCchhhHHHHHH
Q psy5931 39 KIRQQVKCYLQMAALDGKNQLQEGLEVIE-----------------HTNL-----KYLTKEMTAEFYAL 85 (173)
Q Consensus 39 KlrEq~kc~l~~~~~~~~~el~~gL~vi~-----------------~tnl-----~~F~~~qkaE~~~L 85 (173)
-|+++..|..+.+ +.+++..|+-++ .-++ .||+++|+.||-.|
T Consensus 12 eL~~~l~Cvr~~a----~~~l~~kLd~v~~~L~C~~d~C~vrKLC~~~dl~~~L~~~Ft~~e~~e~h~l 76 (90)
T 2knj_A 12 ALVTELECIRLRI----SPETNAAFDNAVQQLNCLNRACAYRKMCATNNLEQAMSVYFTNEQIKEIHDA 76 (90)
T ss_dssp HHHHHHHHHHTCC----SSTHHHHHHHHHHHHTCSSHHHHHHHHHHHCSTHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC----CHHHHHHHHHHHHHcCCCcchhHHHHHHcCCCHhHHHHHHCCHHHHHHHHHH
Confidence 3667777777765 356666666443 3445 69999999999875
No 209
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=68.27 E-value=9.9 Score=33.29 Aligned_cols=47 Identities=19% Similarity=0.193 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCC
Q psy5931 80 AEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNP 131 (173)
Q Consensus 80 aE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~ 131 (173)
+.-+.+-|..+.-.|+.++|...|.+|+.++|..+ .+ .+|+++++..
T Consensus 310 ~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~-t~----~~~~~l~F~s 356 (372)
T 3ly7_A 310 WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN-TL----YWIENGIFQT 356 (372)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH-HH----HHHHHSSSCC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC-hH----HHHhCceeec
Confidence 55668999999999999999999999999999875 44 3567777655
No 210
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=67.81 E-value=14 Score=30.31 Aligned_cols=89 Identities=15% Similarity=0.130 Sum_probs=63.0
Q ss_pred CCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhcc---------------ccCCCc
Q psy5931 12 HHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTN---------------LKYLTK 76 (173)
Q Consensus 12 h~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tn---------------l~~F~~ 76 (173)
.|=+.-|+.+|.+..|- . .+--...||... +++..++--|++.- ..+..|
T Consensus 46 ngEY~R~Lf~L~~lNT~-----T----s~YYk~LCy~kl------KdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~ 110 (242)
T 3kae_A 46 NGEYTRALFHLHKLNTC-----T----SKYYESLCYKKK------KDYKKAIKSLESILEGKVERDPDVDARIQEMFVDP 110 (242)
T ss_dssp TTCHHHHHHHHHTCCBH-----H----HHHHHHHHHHHT------TCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCT
T ss_pred cchHhHHHHHHHhcchH-----H----HHHHHHHHHHHH------HHHHHHHHHHHHHHhcccccCcccccccceeeecc
Confidence 35567788888776553 2 234457899884 55666655444321 224556
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHH
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVK 115 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~k 115 (173)
..+.=|+.+=|.++-++|+.|||-..|..+...++-++-
T Consensus 111 ~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~ 149 (242)
T 3kae_A 111 GDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSP 149 (242)
T ss_dssp TCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHH
T ss_pred chHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccch
Confidence 677777789999999999999999999999988886553
No 211
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=67.80 E-value=7.9 Score=33.97 Aligned_cols=46 Identities=22% Similarity=0.262 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhH
Q psy5931 78 MTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYM 124 (173)
Q Consensus 78 qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~ 124 (173)
..++++..-+.|+.+.|+.++|-+.|..|++. |.....|..++.+.
T Consensus 211 ~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~ 256 (493)
T 2uy1_A 211 YAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVM 256 (493)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhc
Confidence 34899999999999999999999999999999 98888888888773
No 212
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=67.16 E-value=9.5 Score=34.19 Aligned_cols=37 Identities=11% Similarity=0.035 Sum_probs=32.5
Q ss_pred HHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhH
Q psy5931 88 MLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYM 124 (173)
Q Consensus 88 ~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~ 124 (173)
.++.+.|+.+||-+.|.+++.+++.....|..=|...
T Consensus 215 ~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~ 251 (449)
T 1b89_A 215 NYYQDRGYFEELITMLEAALGLERAHMGMFTELAILY 251 (449)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 4679999999999999999999999999998876543
No 213
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=65.21 E-value=27 Score=24.52 Aligned_cols=76 Identities=18% Similarity=0.078 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHH----hCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchh
Q psy5931 81 EFYALKGMLLAQ----IGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRH 156 (173)
Q Consensus 81 E~~~LKG~fl~~----Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~ 156 (173)
+-...=|.++.. .++.++|.+.|..|... ..+.++..-|.....=..-. ++ -..|+..|-+|+..
T Consensus 58 ~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~------~d---~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 58 NGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVV------KN---EKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSC------CC---HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCC------cC---HHHHHHHHHHHHHC
Confidence 334455667766 78899999999999987 56788888887765421101 11 46789999999988
Q ss_pred CCCchhhhhHHH
Q psy5931 157 QKESMSRKYLAK 168 (173)
Q Consensus 157 ~~~~k~Rk~laR 168 (173)
++..+...|++
T Consensus 127 -g~~~A~~~l~~ 137 (138)
T 1klx_A 127 -GSEDACGILNN 137 (138)
T ss_dssp -TCHHHHHHC--
T ss_pred -CCHHHHHHHhh
Confidence 56666665554
No 214
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=64.94 E-value=66 Score=28.39 Aligned_cols=52 Identities=12% Similarity=-0.089 Sum_probs=43.8
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHcc--------chhhHHHHHHHHHhHHhhc
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQM--------HDVMVKAWALWGDYMEAQF 128 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql--------~~~~~kaW~~WG~~~d~~f 128 (173)
+..+..+..=|.++..+|++++|...|..|+.+ ||..+.....-|..+..+.
T Consensus 348 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G 407 (490)
T 3n71_A 348 LYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAG 407 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCC
Confidence 568899999999999999999999999999977 4566777777777777664
No 215
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=64.09 E-value=11 Score=29.07 Aligned_cols=72 Identities=8% Similarity=0.032 Sum_probs=55.8
Q ss_pred HHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHH
Q psy5931 42 QQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWA 118 (173)
Q Consensus 42 Eq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~ 118 (173)
+.+-|+..- ..+.+.++|+.+++..-=+ +++++-|-++.-+.=..|+|++++|-+.-...+++.|....|=.
T Consensus 44 ~YAw~Lv~S---~~~~di~~GI~LLe~l~~~--~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 44 NYAWGLIKS---TDVNDERLGVKILTDIYKE--AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp HHHHHHHHS---SSHHHHHHHHHHHHHHHHH--CCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred HHHHHHHcC---CCHHHHHHHHHHHHHHHhc--CccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 345555542 2467799999999873322 45688899999999999999999999999999999997665543
No 216
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=63.65 E-value=51 Score=28.73 Aligned_cols=109 Identities=11% Similarity=-0.018 Sum_probs=67.5
Q ss_pred hHHHHHHHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHH
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEF 82 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~ 82 (173)
+.+++..|+++=.+.|...+.+- ..|.. -.+.+.+ .|...+... ++...+..+.+..- ..|.+ ..++
T Consensus 290 ~~y~~~~~r~~~~~~AR~i~~~A-~~~~~-~~~v~i~---~A~lE~~~~-----~d~~~ar~ife~al-~~~~~--~~~~ 356 (493)
T 2uy1_A 290 INHLNYVLKKRGLELFRKLFIEL-GNEGV-GPHVFIY---CAFIEYYAT-----GSRATPYNIFSSGL-LKHPD--STLL 356 (493)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHH-TTSCC-CHHHHHH---HHHHHHHHH-----CCSHHHHHHHHHHH-HHCTT--CHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHh-hCCCC-ChHHHHH---HHHHHHHHC-----CChHHHHHHHHHHH-HHCCC--CHHH
Confidence 56777777776688888888888 66654 2344443 122222221 11223333333221 12322 2455
Q ss_pred HHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhc
Q psy5931 83 YALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQF 128 (173)
Q Consensus 83 ~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f 128 (173)
+---+.|..++|+.++|-..|..+. ...+.|..|..|-....
T Consensus 357 ~~~yid~e~~~~~~~~aR~l~er~~----k~~~lw~~~~~fE~~~G 398 (493)
T 2uy1_A 357 KEEFFLFLLRIGDEENARALFKRLE----KTSRMWDSMIEYEFMVG 398 (493)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHSC----CBHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHCC
Confidence 5555778899999999999999984 45889999999866654
No 217
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=61.80 E-value=17 Score=30.80 Aligned_cols=54 Identities=17% Similarity=0.111 Sum_probs=43.8
Q ss_pred hHHHHHHHHhhhccccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccch
Q psy5931 57 NQLQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHD 111 (173)
Q Consensus 57 ~el~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~ 111 (173)
+++.++|+.+... |+.=......|.+.+.+.++.++|+.|.|.+.+....+.+|
T Consensus 114 g~~eeAL~~l~~~-i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~ 167 (310)
T 3mv2_B 114 GDLDKSLETCVEG-IDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIE 167 (310)
T ss_dssp TCHHHHHHHHHHH-HTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHH-hccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 4678888888765 32211257899999999999999999999999999888886
No 218
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=60.68 E-value=40 Score=23.57 Aligned_cols=72 Identities=13% Similarity=0.058 Sum_probs=50.2
Q ss_pred HHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCCchhhhh
Q psy5931 86 KGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKESMSRKY 165 (173)
Q Consensus 86 KG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~~k~Rk~ 165 (173)
-|.++..-+..++|-+.|..|... ..+.++..-|.....=..-. ++ -..|+..|-+|+.. ++..+--.
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~------~d---~~~A~~~~~~Aa~~-g~~~a~~~ 98 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVK------KD---LRKAAQYYSKACGL-NDQDGCLI 98 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSC------CC---HHHHHHHHHHHHHT-TCHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCC------cc---HHHHHHHHHHHHcC-CCHHHHHH
Confidence 567777777788899999999988 66888888888765421111 11 35678888888876 56666555
Q ss_pred HHHH
Q psy5931 166 LAKV 169 (173)
Q Consensus 166 laRi 169 (173)
|+.+
T Consensus 99 Lg~~ 102 (138)
T 1klx_A 99 LGYK 102 (138)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 219
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=60.23 E-value=9.2 Score=35.09 Aligned_cols=56 Identities=13% Similarity=0.138 Sum_probs=48.8
Q ss_pred hHHHHHHHHhhhcccc--CCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchh
Q psy5931 57 NQLQEGLEVIEHTNLK--YLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDV 112 (173)
Q Consensus 57 ~el~~gL~vi~~tnl~--~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~ 112 (173)
+.+..+..+++.+..- ..+..|.+.+++--|.+..-.+++.+|++.|..|+..+|.
T Consensus 245 ~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~ 302 (523)
T 4b4t_S 245 GEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPH 302 (523)
T ss_dssp SCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSC
T ss_pred CcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 4577888999998762 4677899999999999999999999999999999998874
No 220
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=59.72 E-value=12 Score=25.35 Aligned_cols=36 Identities=14% Similarity=0.026 Sum_probs=29.4
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchh
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDV 112 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~ 112 (173)
.++|..+.-+|.-..+-|++++|...|..|+.+...
T Consensus 10 l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~ 45 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLML 45 (85)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 467788888888888999999999999888876444
No 221
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=59.72 E-value=11 Score=27.66 Aligned_cols=36 Identities=25% Similarity=0.056 Sum_probs=30.2
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchh
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDV 112 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~ 112 (173)
.++|..+.-+|.-..+-|++++|...|..||++...
T Consensus 15 l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~ 50 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 50 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 467888888898889999999999999999886443
No 222
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=57.06 E-value=52 Score=27.58 Aligned_cols=74 Identities=16% Similarity=0.035 Sum_probs=33.7
Q ss_pred HHHHHHHHHhC---CchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCCc
Q psy5931 84 ALKGMLLAQIG---RSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKES 160 (173)
Q Consensus 84 ~LKG~fl~~Lg---~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~~ 160 (173)
..-|.++...| +.++|.+.|..|+.. ..+.+|..-|.....-.... . =-..|+.+|-+|+.. ++.
T Consensus 332 ~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~------~---~~~~A~~~~~~A~~~-~~~ 399 (490)
T 2xm6_A 332 ANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVK------K---DEQQAAIWMRKAAEQ-GLS 399 (490)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSC------C---CHHHHHHHHHHHHHT-TCH
T ss_pred HHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCC------C---CHHHHHHHHHHHHhC-CCH
Confidence 33444444434 445555555555554 23455555555443311100 0 023466666666654 344
Q ss_pred hhhhhHHHH
Q psy5931 161 MSRKYLAKV 169 (173)
Q Consensus 161 k~Rk~laRi 169 (173)
.+.-.|+.+
T Consensus 400 ~a~~~Lg~~ 408 (490)
T 2xm6_A 400 AAQVQLGEI 408 (490)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444433
No 223
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=56.20 E-value=16 Score=24.76 Aligned_cols=37 Identities=14% Similarity=-0.047 Sum_probs=31.8
Q ss_pred chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchh
Q psy5931 76 KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDV 112 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~ 112 (173)
++....=..+-|....+.|++++|-..|...+..+|.
T Consensus 39 dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 39 EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 4555566667799999999999999999999999887
No 224
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=55.19 E-value=14 Score=33.11 Aligned_cols=44 Identities=11% Similarity=0.046 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 79 TAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 79 kaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
+++-|.-.|.-+.+||++++|-++|..| +.++.|..|+.-|-..
T Consensus 147 ~a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~ 190 (449)
T 1b89_A 147 NVSNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDG 190 (449)
T ss_dssp HTTCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHT
T ss_pred HhhhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHc
Confidence 3455667788999999999999999999 4689999998888765
No 225
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=53.27 E-value=29 Score=23.21 Aligned_cols=66 Identities=12% Similarity=-0.153 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHHccch-------hhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHH
Q psy5931 80 AEFYALKGMLLAQIGRSAEANKAFSAAVQMHD-------VMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMH 152 (173)
Q Consensus 80 aE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~-------~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLq 152 (173)
++-..--|.++.+.|+++.|..-|..|++..+ ..+..+...|.-+.++-. -..|+..|-+
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~-------------~~~A~~~~~~ 71 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGD-------------LDKALLLTKK 71 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTC-------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccC-------------HHHHHHHHHH
Confidence 44455669999999999999999999998752 345666666665555431 3558888888
Q ss_pred HchhCC
Q psy5931 153 ACRHQK 158 (173)
Q Consensus 153 A~~~~~ 158 (173)
|.++..
T Consensus 72 al~l~P 77 (104)
T 2v5f_A 72 LLELDP 77 (104)
T ss_dssp HHHHCT
T ss_pred HHhcCC
Confidence 887743
No 226
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=52.74 E-value=41 Score=28.20 Aligned_cols=72 Identities=15% Similarity=0.015 Sum_probs=38.1
Q ss_pred HHHHHHHHh-----CCchHHHHHHHHHHccchhhHHHHHHHHHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHchhCCC
Q psy5931 85 LKGMLLAQI-----GRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACRHQKE 159 (173)
Q Consensus 85 LKG~fl~~L-----g~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~~~~~ 159 (173)
.-|.++... ++.++|.+.|..|+... .+.+|..-|...... .. ..--..|+.+|-+|+.. ++
T Consensus 296 ~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~y~~~--g~--------~~~~~~A~~~~~~a~~~-~~ 362 (490)
T 2xm6_A 296 YLAHLYDKGAEGVAKNREQAISWYTKSAEQG--DATAQANLGAIYFRL--GS--------EEEHKKAVEWFRKAAAK-GE 362 (490)
T ss_dssp HHHHHHHHCBTTBCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHS--CC--------HHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHHcCCCCCcCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHhC--CC--------cccHHHHHHHHHHHHHC-CC
Confidence 344555544 55566666666665542 234555555554443 10 01135677777777766 45
Q ss_pred chhhhhHHHH
Q psy5931 160 SMSRKYLAKV 169 (173)
Q Consensus 160 ~k~Rk~laRi 169 (173)
..+.-.|+.+
T Consensus 363 ~~a~~~Lg~~ 372 (490)
T 2xm6_A 363 KAAQFNLGNA 372 (490)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555554
No 227
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=52.08 E-value=85 Score=27.67 Aligned_cols=97 Identities=8% Similarity=0.009 Sum_probs=59.9
Q ss_pred HHHHHhCCChHHHHHHHHh-------hcCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhcc---ccCCC
Q psy5931 6 GKIARKHHLTSVCLDSLFR-------LYTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTN---LKYLT 75 (173)
Q Consensus 6 a~iARkh~l~~vc~~~L~k-------i~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tn---l~~F~ 75 (173)
+.-.+.+|-++-++..+.+ +++--...+...... -+..|... .++.+++.+.+.+- ...+.
T Consensus 316 a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~n---La~~y~~~------g~~~eA~~~~~~aL~i~~~~lG 386 (490)
T 3n71_A 316 IDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSI---ASEVLSYL------QAYEEASHYARRMVDGYMKLYH 386 (490)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHH---HHHHHHHT------TCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH---HHHHHHHh------cCHHHHHHHHHHHHHHHHHHcC
Confidence 4456778877766655544 344333333333332 34455543 34445544443321 12334
Q ss_pred c--hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccch
Q psy5931 76 K--EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHD 111 (173)
Q Consensus 76 ~--~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~ 111 (173)
+ +..+.-+..=|.++...|++++|...|..|+.+..
T Consensus 387 ~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~ 424 (490)
T 3n71_A 387 HNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILL 424 (490)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 4 56888888999999999999999999999987643
No 228
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=49.48 E-value=1.3e+02 Score=25.90 Aligned_cols=92 Identities=13% Similarity=-0.069 Sum_probs=61.2
Q ss_pred HHHHHHHHhhhcc---ccCCCc--hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHcc--------chhhHHHHHHHHHhH
Q psy5931 58 QLQEGLEVIEHTN---LKYLTK--EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQM--------HDVMVKAWALWGDYM 124 (173)
Q Consensus 58 el~~gL~vi~~tn---l~~F~~--~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql--------~~~~~kaW~~WG~~~ 124 (173)
++.+++++.+..- ...+.+ +..+..+..-|..+..+|++++|...|..++.+ ||..+..+..-|...
T Consensus 302 ~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~ 381 (429)
T 3qwp_A 302 KWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQ 381 (429)
T ss_dssp CHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHH
Confidence 4555555544321 223343 457888888899999999999999999999865 556778888888887
Q ss_pred HhhcCCCCCCCCCchhhhHHHHHHHHHHHch
Q psy5931 125 EAQFTNPSPPGSAPNMVLGVFAVTCFMHACR 155 (173)
Q Consensus 125 d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~ 155 (173)
.....-+ ....+.+.|+.-+...-+
T Consensus 382 ~~~g~~~------eA~~~~~~Al~i~~~~lG 406 (429)
T 3qwp_A 382 LHQGMFP------QAMKNLRLAFDIMRVTHG 406 (429)
T ss_dssp HHTTCHH------HHHHHHHHHHHHHHHHTC
T ss_pred HhcCCHH------HHHHHHHHHHHHHHHhcC
Confidence 7765322 344455555555544443
No 229
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=46.90 E-value=1.3e+02 Score=25.25 Aligned_cols=147 Identities=5% Similarity=-0.048 Sum_probs=88.9
Q ss_pred hHHHHHHHhCCChHHHHHHHHhh-cCCCCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCch----
Q psy5931 3 IQFGKIARKHHLTSVCLDSLFRL-YTIPSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKE---- 77 (173)
Q Consensus 3 ~~fa~iARkh~l~~vc~~~L~ki-~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~---- 77 (173)
.-.|.+....|-++-|+..|.+. ..-|+..-.|++.. .+.+|+.+ ++...+..++++-. -+.++
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l---~vqi~L~~------~r~d~A~k~l~~~~--~~~~d~~~~ 172 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLL---AIEVALLN------NNVSTASTIFDNYT--NAIEDTVSG 172 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHH---HHHHHHHT------TCHHHHHHHHHHHH--HHSCHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHH---HHHHHHHC------CCHHHHHHHHHHHH--hcCcccccc
Confidence 45788888899999999999996 33333344555544 46788886 45666666665431 12331
Q ss_pred hhHHHHHH-HHHHHHHhC--CchHHHHHHHHHHccchhhHHHHHHHHH------------hHHhhcCC----------CC
Q psy5931 78 MTAEFYAL-KGMLLAQIG--RSAEANKAFSAAVQMHDVMVKAWALWGD------------YMEAQFTN----------PS 132 (173)
Q Consensus 78 qkaE~~~L-KG~fl~~Lg--~~deA~~~F~~Avql~~~~~kaW~~WG~------------~~d~~f~~----------~~ 132 (173)
+.+-+..| -|-+....| ++++|...|..+.+-.|+..-.-..|+- .++.+-.. +|
T Consensus 173 ~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p 252 (310)
T 3mv2_B 173 DNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLNLHLQQRNIAEAQGIVELLLSDYYSVEQKENAVL 252 (310)
T ss_dssp HHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHHHHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHS
T ss_pred chHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHHHHHHcCCHHHHHHHHHHHHHhcccccccccCCC
Confidence 33444444 475566666 8999999999999988862222222221 11111111 12
Q ss_pred CCCCCchhhhHHHHHHHHHHHchhCCCchhhhhHHHHh
Q psy5931 133 PPGSAPNMVLGVFAVTCFMHACRHQKESMSRKYLAKVD 170 (173)
Q Consensus 133 ~~~~~~~~~~~~~Ai~CyLqA~~~~~~~k~Rk~laRiL 170 (173)
.+.....++|+|+....+ .+.+++.++.
T Consensus 253 -----~~~~~LaN~i~l~~~lgk-----~a~~l~~qL~ 280 (310)
T 3mv2_B 253 -----YKPTFLANQITLALMQGL-----DTEDLTNQLV 280 (310)
T ss_dssp -----SHHHHHHHHHHHHHHTTC-----TTHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHHhCh-----HHHHHHHHHH
Confidence 456667788888887532 6678877653
No 230
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=46.09 E-value=48 Score=28.80 Aligned_cols=36 Identities=19% Similarity=0.260 Sum_probs=31.9
Q ss_pred chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccch
Q psy5931 76 KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHD 111 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~ 111 (173)
-+..+.-+.-=|.++...|+++||...|..|+.+..
T Consensus 378 Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~ 413 (433)
T 3qww_A 378 SLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIME 413 (433)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 367888888899999999999999999999988743
No 231
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=44.53 E-value=1.1e+02 Score=26.63 Aligned_cols=67 Identities=16% Similarity=0.175 Sum_probs=51.3
Q ss_pred HHHHHHH---HHHHHhhhhccCChhHHHHHHHHhhhcc-----ccCCCchhhHHHHHHHHHHHHHhCCchHHHHHHHHHH
Q psy5931 36 CFEKIRQ---QVKCYLQMAALDGKNQLQEGLEVIEHTN-----LKYLTKEMTAEFYALKGMLLAQIGRSAEANKAFSAAV 107 (173)
Q Consensus 36 aF~KlrE---q~kc~l~~~~~~~~~el~~gL~vi~~tn-----l~~F~~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Av 107 (173)
.|+|-+- .++-|++ ..+|.+++.+|+... +|. +.+--|++.+--.+...+|+...+..+|..|-
T Consensus 95 ~flr~~l~~kL~~l~~~------~~~y~~a~~~i~~l~~~~~~~dd--~~~llev~lle~~~~~~~~n~~k~k~~l~~a~ 166 (394)
T 3txn_A 95 TFLRQSLEARLIALYFD------TALYTEALALGAQLLRELKKLDD--KNLLVEVQLLESKTYHALSNLPKARAALTSAR 166 (394)
T ss_dssp HHHHHHHHHHHHHHHHH------TTCHHHHHHHHHHHHHHHTTSSC--THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH------hhhHHHHHHHHHHHHHHHhcccc--chhHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 5666444 3446666 478999998887643 332 68999999999999999999999999998885
Q ss_pred ccc
Q psy5931 108 QMH 110 (173)
Q Consensus 108 ql~ 110 (173)
++-
T Consensus 167 ~~~ 169 (394)
T 3txn_A 167 TTA 169 (394)
T ss_dssp HHH
T ss_pred hhh
Confidence 543
No 232
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=44.07 E-value=31 Score=23.72 Aligned_cols=35 Identities=11% Similarity=0.075 Sum_probs=27.7
Q ss_pred hhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchh
Q psy5931 78 MTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDV 112 (173)
Q Consensus 78 qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~ 112 (173)
-+|..+.-+|.-..+-|++++|...|..|+.....
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~ 48 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQ 48 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 35667777888889999999999999888876443
No 233
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=41.21 E-value=23 Score=24.09 Aligned_cols=29 Identities=14% Similarity=0.088 Sum_probs=25.9
Q ss_pred HHHHHHHhCCchHHHHHHHHHHccchhhH
Q psy5931 86 KGMLLAQIGRSAEANKAFSAAVQMHDVMV 114 (173)
Q Consensus 86 KG~fl~~Lg~~deA~~~F~~Avql~~~~~ 114 (173)
.|.-+..-|+.|+|-.-|..|+.+|++-.
T Consensus 23 ~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~ 51 (73)
T 3ax2_A 23 LGEELLAQGDYEKGVDHLTNAIAVCGQPQ 51 (73)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCSSCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCCHH
Confidence 68888999999999999999999999743
No 234
>1vyk_A Oxygen-evolving enhancer protein 3; photosystem II, oxygen-enhancer evolving complex, water oxidizing complex, PSBQ, OEE3, photosynthesis; 1.49A {Spinacia oleracea} PDB: 1nze_A
Probab=36.99 E-value=1e+02 Score=23.59 Aligned_cols=81 Identities=14% Similarity=0.209 Sum_probs=45.1
Q ss_pred HHhCCChHHHHHHHHhhcCCCCCcHHHHHHHHHHHHHHHhhhhccCCh--------------hHHHHHHHHhhhccccCC
Q psy5931 9 ARKHHLTSVCLDSLFRLYTIPSVPIVDCFEKIRQQVKCYLQMAALDGK--------------NQLQEGLEVIEHTNLKYL 74 (173)
Q Consensus 9 ARkh~l~~vc~~~L~ki~~lp~i~v~daF~KlrEq~kc~l~~~~~~~~--------------~el~~gL~vi~~tnl~~F 74 (173)
||...|+.+ ..=+.+|.+++.||-.+||+.++=...+-+..++ .++..-|+-|.++-
T Consensus 26 ard~~l~~~-----k~~f~~~~l~~~~a~~rIk~~a~~i~~vk~lI~k~~W~~vrn~LR~~~~~Lr~Dl~~li~sl---- 96 (149)
T 1vyk_A 26 ARDGTLPYT-----KDRFYLQPLPPTEAAQRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYDLKTVISAK---- 96 (149)
T ss_dssp --------C-----TTCCEECCCCHHHHHHHHHHHHHHHHTTHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHS----
T ss_pred hhccCcccc-----ccccccCCCCHHHHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHHHhHHHHHHHHHHHHHhC----
Confidence 455555544 4446788899999999999999887664221111 12333333333332
Q ss_pred CchhhHHHHHHHHHHHHHhCCchH
Q psy5931 75 TKEMTAEFYALKGMLLAQIGRSAE 98 (173)
Q Consensus 75 ~~~qkaE~~~LKG~fl~~Lg~~de 98 (173)
.+++|.++-.|-..|...+-+.|+
T Consensus 97 p~~~kk~l~~La~~Lf~~le~LD~ 120 (149)
T 1vyk_A 97 PKDEKKSLQELTSKLFSSIDNLDH 120 (149)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478888877777777655544444
No 235
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=34.21 E-value=55 Score=22.33 Aligned_cols=35 Identities=23% Similarity=0.325 Sum_probs=27.0
Q ss_pred hhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccch
Q psy5931 77 EMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHD 111 (173)
Q Consensus 77 ~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~ 111 (173)
.++|--+.-+|.=..+-|++++|-..|..|++...
T Consensus 16 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 50 (83)
T 2w2u_A 16 EEMARKYAINAVKADKEGNAEEAITNYKKAIEVLA 50 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 35555666777778999999999999998887633
No 236
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=33.99 E-value=1.7e+02 Score=23.72 Aligned_cols=85 Identities=15% Similarity=0.147 Sum_probs=49.1
Q ss_pred HHHHHHHhhhccccCC-CchhhHHHHHHHHHHHHHhCC----------chHHHHHHHHHHc-----cchhhH---HHHHH
Q psy5931 59 LQEGLEVIEHTNLKYL-TKEMTAEFYALKGMLLAQIGR----------SAEANKAFSAAVQ-----MHDVMV---KAWAL 119 (173)
Q Consensus 59 l~~gL~vi~~tnl~~F-~~~qkaE~~~LKG~fl~~Lg~----------~deA~~~F~~Avq-----l~~~~~---kaW~~ 119 (173)
.++.|++|++.-|..= +++-|.=++-+||.++--+-. .+.|.++|..|.. +.|+.| ..=..
T Consensus 98 C~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN 177 (234)
T 2br9_A 98 CCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALN 177 (234)
T ss_dssp HHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHccCCCCCcHHHHHHHH
Confidence 4578888888766322 233343333567776654432 2568888988874 555555 34455
Q ss_pred HHHhHHhhcCCCCCCCCCchhhhHHHHHH
Q psy5931 120 WGDYMEAQFTNPSPPGSAPNMVLGVFAVT 148 (173)
Q Consensus 120 WG~~~d~~f~~~~~~~~~~~~~~~~~Ai~ 148 (173)
+.-|+.-..... .+..++|.+|+.
T Consensus 178 ~SVF~yEil~~~-----~~A~~lAk~afd 201 (234)
T 2br9_A 178 FSVFYYEILNSP-----DRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHTSCCH-----HHHHHHHHHHHH
T ss_pred HHHHHHHHcCCH-----HHHHHHHHHHHH
Confidence 666655554322 256677777653
No 237
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=33.91 E-value=54 Score=22.69 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=19.1
Q ss_pred hHHHHHHHHHHHHHhCCchHHHHHHHHHHcc
Q psy5931 79 TAEFYALKGMLLAQIGRSAEANKAFSAAVQM 109 (173)
Q Consensus 79 kaE~~~LKG~fl~~Lg~~deA~~~F~~Avql 109 (173)
+|--+.-+|.=..+-|++++|...|..|++.
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4455555666666666666666666666554
No 238
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=33.19 E-value=3.1e+02 Score=25.98 Aligned_cols=52 Identities=8% Similarity=0.068 Sum_probs=45.1
Q ss_pred chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccchhhHHHHHHHHHhHHhh
Q psy5931 76 KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHDVMVKAWALWGDYMEAQ 127 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~~~~kaW~~WG~~~d~~ 127 (173)
.++.++++.+-+.||-.-|++|-|-+.=..||...|..-+.|+.=+...-.+
T Consensus 333 ~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l 384 (754)
T 4gns_B 333 MNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKK 384 (754)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHT
T ss_pred cCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHh
Confidence 3677899999999999999999999999999999999988887666654444
No 239
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=33.00 E-value=59 Score=22.00 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHHHHhCCchHHHHHHHHHHccch
Q psy5931 78 MTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHD 111 (173)
Q Consensus 78 qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~ 111 (173)
++|--+.-+|.=..+-|++++|...|..|++...
T Consensus 9 ~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 42 (83)
T 2v6y_A 9 DMARKYAILAVKADKEGKVEDAITYYKKAIEVLS 42 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 4677777888888999999999999998887643
No 240
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=26.54 E-value=2.6e+02 Score=23.03 Aligned_cols=84 Identities=11% Similarity=0.094 Sum_probs=49.6
Q ss_pred HHHHHHHhhhccccC-CCchhhHHHHHHHHHHHHHhCC----------chHHHHHHHHHHc-----cchhhH---HHHHH
Q psy5931 59 LQEGLEVIEHTNLKY-LTKEMTAEFYALKGMLLAQIGR----------SAEANKAFSAAVQ-----MHDVMV---KAWAL 119 (173)
Q Consensus 59 l~~gL~vi~~tnl~~-F~~~qkaE~~~LKG~fl~~Lg~----------~deA~~~F~~Avq-----l~~~~~---kaW~~ 119 (173)
.++.|++|++.-|.. -+++-|.=++-+||.++--+-. .+.|.++|..|.. |.|+.| ..=..
T Consensus 103 C~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLN 182 (260)
T 1o9d_A 103 CDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALN 182 (260)
T ss_dssp HHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHH
Confidence 367888888876632 2233443334567777654432 2568888888864 555555 34455
Q ss_pred HHHhHHhhcCCCCCCCCCchhhhHHHHH
Q psy5931 120 WGDYMEAQFTNPSPPGSAPNMVLGVFAV 147 (173)
Q Consensus 120 WG~~~d~~f~~~~~~~~~~~~~~~~~Ai 147 (173)
+.-|+....... .+..++|.+|+
T Consensus 183 fSVFyYEiln~~-----~~Ac~lAk~Af 205 (260)
T 1o9d_A 183 FSVFYYEILNSP-----DRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHTSCCH-----HHHHHHHHHHH
T ss_pred HHHHHHHHccCH-----HHHHHHHHHHH
Confidence 666666554332 25667777765
No 241
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=24.98 E-value=2.9e+02 Score=22.79 Aligned_cols=89 Identities=12% Similarity=0.137 Sum_probs=51.5
Q ss_pred HHHHHHHhhhccccCC-CchhhHHHHHHHHHHHHHhCC----------chHHHHHHHHHHc----cchhhH---HHHHHH
Q psy5931 59 LQEGLEVIEHTNLKYL-TKEMTAEFYALKGMLLAQIGR----------SAEANKAFSAAVQ----MHDVMV---KAWALW 120 (173)
Q Consensus 59 l~~gL~vi~~tnl~~F-~~~qkaE~~~LKG~fl~~Lg~----------~deA~~~F~~Avq----l~~~~~---kaW~~W 120 (173)
.++.|++|++.-|..= +++-|.=++-+||.++--+-. .+.|.++|..|.. |.|+.| ..=..+
T Consensus 124 C~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~L~pthPirLGLaLNf 203 (260)
T 2npm_A 124 CNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVVAKDLEPTHPIRLGLALNF 203 (260)
T ss_dssp HHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred HhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHH
Confidence 3678888888766322 233343333567777654432 2567888888874 566655 344556
Q ss_pred HHhHHhhcCCCCCCCCCchhhhHHHHHHHHHHHch
Q psy5931 121 GDYMEAQFTNPSPPGSAPNMVLGVFAVTCFMHACR 155 (173)
Q Consensus 121 G~~~d~~f~~~~~~~~~~~~~~~~~Ai~CyLqA~~ 155 (173)
.-|..-..... .+..++|.+|+ -.|+.
T Consensus 204 SVFyYEiln~~-----~~Ac~lAk~Af---d~Ai~ 230 (260)
T 2npm_A 204 SVFHYEILNEP-----RAAIDMAKEAF---EMAIE 230 (260)
T ss_dssp HHHHHHTSCCH-----HHHHHHHHHHH---HHHHT
T ss_pred HHHHHHHcCCH-----HHHHHHHHHHH---HHHHH
Confidence 66665554332 25667777664 45553
No 242
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=22.32 E-value=3.1e+02 Score=22.20 Aligned_cols=83 Identities=7% Similarity=-0.082 Sum_probs=55.3
Q ss_pred HHHHHHHhhhccccCCCchhhHHHHHHHHHHHHH-----hCCchHHHHHHHHHHc-----cchhhH---HHHHHHHHhHH
Q psy5931 59 LQEGLEVIEHTNLKYLTKEMTAEFYALKGMLLAQ-----IGRSAEANKAFSAAVQ-----MHDVMV---KAWALWGDYME 125 (173)
Q Consensus 59 l~~gL~vi~~tnl~~F~~~qkaE~~~LKG~fl~~-----Lg~~deA~~~F~~Avq-----l~~~~~---kaW~~WG~~~d 125 (173)
.++.|++|++.-+.-- +-|.=++-+||.++-- .|+.+.|.++|..|.. +.|+.| ..=..|.-|..
T Consensus 101 C~dil~lld~~Lip~a--EskVFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyY 178 (227)
T 2o8p_A 101 LQSFEDCVDRLVEKSF--FSKFFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILS 178 (227)
T ss_dssp HHHHHHHHHTCCCCSH--HHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHH
T ss_pred HhhHHHHHHHhccCcH--HHHHHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHH
Confidence 4578889988877432 4444445567777654 4567899999998875 555555 45566777766
Q ss_pred hhcCCCCCCCCCchhhhHHHHHH
Q psy5931 126 AQFTNPSPPGSAPNMVLGVFAVT 148 (173)
Q Consensus 126 ~~f~~~~~~~~~~~~~~~~~Ai~ 148 (173)
...... .+..++|.+|+.
T Consensus 179 EIln~p-----~~Ac~lAk~Afd 196 (227)
T 2o8p_A 179 EKYGEK-----KQVFNMLNSLGK 196 (227)
T ss_dssp HTSSCH-----HHHHHHHHHHHH
T ss_pred HHccCH-----HHHHHHHHHHHH
Confidence 665433 267788888866
No 243
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=22.20 E-value=3.2e+02 Score=22.22 Aligned_cols=84 Identities=14% Similarity=0.130 Sum_probs=49.5
Q ss_pred HHHHHHHhhhcccc-CCCchhhHHHHHHHHHHHHHh-----CC-----chHHHHHHHHHHc-----cchhhH---HHHHH
Q psy5931 59 LQEGLEVIEHTNLK-YLTKEMTAEFYALKGMLLAQI-----GR-----SAEANKAFSAAVQ-----MHDVMV---KAWAL 119 (173)
Q Consensus 59 l~~gL~vi~~tnl~-~F~~~qkaE~~~LKG~fl~~L-----g~-----~deA~~~F~~Avq-----l~~~~~---kaW~~ 119 (173)
.++-|++|++.-|. --+++-|.=++-+||..+--+ |+ .+.|.++|..|.. +.|+.| ..=..
T Consensus 101 C~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLN 180 (236)
T 3iqu_A 101 CDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALN 180 (236)
T ss_dssp HHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHH
Confidence 46678888877652 223344443455788877554 33 3668888988764 555555 33445
Q ss_pred HHHhHHhhcCCCCCCCCCchhhhHHHHH
Q psy5931 120 WGDYMEAQFTNPSPPGSAPNMVLGVFAV 147 (173)
Q Consensus 120 WG~~~d~~f~~~~~~~~~~~~~~~~~Ai 147 (173)
+.-|....-... .+..++|.+|+
T Consensus 181 fSVFyyEiln~~-----~~Ac~lAk~Af 203 (236)
T 3iqu_A 181 FSVFHYEIANSP-----EEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHTSSCH-----HHHHHHHHHHH
T ss_pred HHHHHHHHcCCH-----HHHHHHHHHHH
Confidence 556655544332 25667777664
No 244
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=21.71 E-value=82 Score=27.08 Aligned_cols=95 Identities=13% Similarity=0.081 Sum_probs=57.6
Q ss_pred HHHHhCCChHHHHHHHHhhcCC-------CCCcHHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhcc---ccCCC-
Q psy5931 7 KIARKHHLTSVCLDSLFRLYTI-------PSVPIVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTN---LKYLT- 75 (173)
Q Consensus 7 ~iARkh~l~~vc~~~L~ki~~l-------p~i~v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tn---l~~F~- 75 (173)
.-++++|-++-++....+...+ .++.+.+....| +..|..+ .++.+++++.+.+- ...+.
T Consensus 295 e~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L---~~~y~~~------g~~~eA~~~~~~~L~i~~~~lg~ 365 (429)
T 3qwp_A 295 EELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCA---MDACINL------GLLEEALFYGTRTMEPYRIFFPG 365 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHH---HHHHHHH------TCHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHH---HHHHHhh------ccHHHHHHHHHHHHHhHHHHcCC
Confidence 3456777777777666654322 123233332222 3334432 34555555444321 12233
Q ss_pred -chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccc
Q psy5931 76 -KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMH 110 (173)
Q Consensus 76 -~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~ 110 (173)
-+..+--+.-=|.++...|++++|...|..|+.+.
T Consensus 366 ~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 366 SHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 36788888889999999999999999999998874
No 245
>2lo0_A Uncharacterized protein; dimerization, homodimerization, protein binding; NMR {Aspergillus fumigatus}
Probab=21.52 E-value=71 Score=21.97 Aligned_cols=26 Identities=35% Similarity=0.466 Sum_probs=21.5
Q ss_pred hHHHHH-HHHHHHHHhCCchHHHHHHH
Q psy5931 79 TAEFYA-LKGMLLAQIGRSAEANKAFS 104 (173)
Q Consensus 79 kaE~~~-LKG~fl~~Lg~~deA~~~F~ 104 (173)
..+|+. |||.+..|+.+.++|.+..+
T Consensus 39 TeeFW~DL~gFL~qRlkDe~~A~~l~s 65 (75)
T 2lo0_A 39 TEAFWDDLQGFLEQRLKDYDEANKLRV 65 (75)
T ss_dssp SHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 456776 69999999999999988754
No 246
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=21.45 E-value=89 Score=26.59 Aligned_cols=75 Identities=17% Similarity=0.121 Sum_probs=54.8
Q ss_pred ccCCCchhhHHHHHHHHHHHHH-hC----------CchHHHHHHHHHHccchh--hHHHHHHHHHhHHhh---cCCCCCC
Q psy5931 71 LKYLTKEMTAEFYALKGMLLAQ-IG----------RSAEANKAFSAAVQMHDV--MVKAWALWGDYMEAQ---FTNPSPP 134 (173)
Q Consensus 71 l~~F~~~qkaE~~~LKG~fl~~-Lg----------~~deA~~~F~~Avql~~~--~~kaW~~WG~~~d~~---f~~~~~~ 134 (173)
|.... +..+|.+.-.|...+. .+ ...+|......|+.++|+ .+.+|..-|.+..++ +..+
T Consensus 144 l~~~~-~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd--- 219 (301)
T 3u64_A 144 LSRCT-RVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGG--- 219 (301)
T ss_dssp HTTCC-GGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCC---
T ss_pred HHHcC-ccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCC---
Confidence 33443 5578899999988866 22 235688889999999999 678999999998886 1122
Q ss_pred CCCchhhhHHHHHHHHHHHchhC
Q psy5931 135 GSAPNMVLGVFAVTCFMHACRHQ 157 (173)
Q Consensus 135 ~~~~~~~~~~~Ai~CyLqA~~~~ 157 (173)
-..|-.+|-+|..+.
T Consensus 220 --------~ekA~~~ferAL~Ln 234 (301)
T 3u64_A 220 --------MEKAHTAFEHLTRYC 234 (301)
T ss_dssp --------HHHHHHHHHHHHHHC
T ss_pred --------HHHHHHHHHHHHHhC
Confidence 245777888888774
No 247
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=21.25 E-value=97 Score=23.63 Aligned_cols=36 Identities=14% Similarity=0.184 Sum_probs=31.9
Q ss_pred chhhHHHHHHHHHHHHHhCCchHHHHHHHHHHccch
Q psy5931 76 KEMTAEFYALKGMLLAQIGRSAEANKAFSAAVQMHD 111 (173)
Q Consensus 76 ~~qkaE~~~LKG~fl~~Lg~~deA~~~F~~Avql~~ 111 (173)
-.+-|.||-==+.+++..|++++|++.|...++-.-
T Consensus 97 G~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A 132 (152)
T 4a1g_A 97 GTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQA 132 (152)
T ss_dssp TTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 367789999999999999999999999999998753
No 248
>3mab_A Uncharacterized protein; NYSGXRC, PSI-2, structural genomics; 1.42A {Listeria monocytogenes} PDB: 3bqt_A
Probab=21.21 E-value=2.1e+02 Score=19.86 Aligned_cols=62 Identities=13% Similarity=0.103 Sum_probs=35.3
Q ss_pred CChHHHHHHHHhhcCCCCCc------HHHHHHHHHHHHHHHhhhhccCChhHHHHHHHHhhhccccCCCchhhHHH
Q psy5931 13 HLTSVCLDSLFRLYTIPSVP------IVDCFEKIRQQVKCYLQMAALDGKNQLQEGLEVIEHTNLKYLTKEMTAEF 82 (173)
Q Consensus 13 ~l~~vc~~~L~ki~~lp~i~------v~daF~KlrEq~kc~l~~~~~~~~~el~~gL~vi~~tnl~~F~~~qkaE~ 82 (173)
|+--.....|.++ ++.+++ ..+||.||++.-. .+ ..+-|-.=---|++..-..++++.|.|+
T Consensus 11 Nig~~~e~~L~~~-GI~t~~~Lr~~Ga~~ay~rLk~~~~----~~---~~~~L~aL~gAi~G~~w~~l~~~~K~~L 78 (93)
T 3mab_A 11 NIGKVLEQDLIKA-GIKTPVELKDVGSKEAFLRIWENDS----SV---CMSELYALEGAVQGIRWHGLDEAKKIEL 78 (93)
T ss_dssp TCCHHHHHHHHHT-TCCSHHHHHHHCHHHHHHHHHHHCT----TC---CHHHHHHHHHHHHTSCGGGSCHHHHHHH
T ss_pred CCCHHHHHHHHHc-CCCCHHHHHhCCHHHHHHHHHHhCC----CC---CHHHHHHHHHHHcCCcHHHCCHHHHHHH
Confidence 4444555666665 555444 6789999987421 10 1122222222355566677789999876
No 249
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=20.53 E-value=48 Score=26.06 Aligned_cols=15 Identities=27% Similarity=0.461 Sum_probs=13.9
Q ss_pred HHHHHHHhCCChHHH
Q psy5931 4 QFGKIARKHHLTSVC 18 (173)
Q Consensus 4 ~fa~iARkh~l~~vc 18 (173)
.||++||+.|+++++
T Consensus 46 ~fA~~A~~EG~~~IA 60 (179)
T 3qhb_A 46 TFAEIARRSGQPEIG 60 (179)
T ss_dssp HHHHHHHHTTCHHHH
T ss_pred HHHHHHHHcChHHHH
Confidence 589999999999988
Done!