Query psy5933
Match_columns 406
No_of_seqs 249 out of 555
Neff 4.6
Searched_HMMs 29240
Date Fri Aug 16 22:14:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5933.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5933hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lw6_A FI08434P, beta-4-galact 100.0 1.8E-77 6.3E-82 582.2 15.7 249 93-348 11-275 (287)
2 2fy7_A Beta-1,4-galactosyltran 100.0 4.7E-60 1.6E-64 458.6 20.3 270 77-349 8-283 (287)
3 1xhb_A Polypeptide N-acetylgal 99.5 3.1E-13 1.1E-17 135.6 13.5 150 132-288 28-251 (472)
4 2d7i_A Polypeptide N-acetylgal 99.4 6.5E-13 2.2E-17 138.3 11.5 158 124-288 97-331 (570)
5 2ffu_A Ppgalnact-2, polypeptid 99.4 1.2E-12 4E-17 133.1 12.0 150 132-288 65-283 (501)
6 2z86_A Chondroitin synthase; G 99.4 1.8E-12 6.2E-17 134.2 12.7 152 131-290 91-325 (625)
7 2nxv_A ATP synthase subunits r 99.3 1.5E-11 5E-16 114.5 11.4 148 132-288 15-197 (249)
8 3bcv_A Putative glycosyltransf 99.3 2.6E-11 8.9E-16 108.7 11.6 154 133-294 5-224 (240)
9 1qg8_A Protein (spore coat pol 99.2 1E-10 3.6E-15 106.0 10.3 152 133-294 1-213 (255)
10 4fix_A UDP-galactofuranosyl tr 99.1 1.2E-10 4.1E-15 124.3 11.6 162 121-288 167-410 (657)
11 2z86_A Chondroitin synthase; G 99.0 4.7E-09 1.6E-13 108.7 15.4 149 132-290 374-567 (625)
12 3l7i_A Teichoic acid biosynthe 98.5 1.3E-08 4.4E-13 108.4 0.0 146 133-287 2-197 (729)
13 4hg6_A Cellulose synthase subu 98.5 2.9E-07 9.8E-12 100.0 10.4 146 132-288 139-361 (802)
14 3f1y_A Mannosyl-3-phosphoglyce 98.5 1.2E-07 4.3E-12 95.1 6.3 148 132-288 93-302 (387)
15 3ckj_A Putative uncharacterize 98.4 6.9E-07 2.4E-11 86.2 8.6 144 131-287 46-256 (329)
16 1fo8_A Alpha-1,3-mannosyl-glyc 97.0 0.00087 3E-08 66.7 6.8 79 134-215 3-117 (343)
17 2bo4_A Mannosylglycerate synth 95.4 0.028 9.6E-07 56.7 7.4 148 136-288 3-210 (397)
18 2zu9_A Mannosyl-3-phosphoglyce 94.4 0.071 2.4E-06 54.2 7.3 27 181-208 145-171 (394)
19 2wvl_A Mannosyl-3-phosphoglyce 89.6 0.49 1.7E-05 48.0 6.3 29 184-213 147-175 (391)
20 2c0n_A A197; thermophil protei 79.1 2.6 9E-05 39.3 5.5 141 134-286 2-167 (203)
21 1gwm_A NCP1, non-catalytic pro 28.6 11 0.00038 32.8 -0.2 75 319-399 67-150 (153)
22 1wcu_A CBM29_1, non-catalytic 26.5 13 0.00044 32.4 -0.2 41 330-370 89-131 (153)
No 1
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=100.00 E-value=1.8e-77 Score=582.20 Aligned_cols=249 Identities=27% Similarity=0.488 Sum_probs=200.1
Q ss_pred CCCcceeecccCCCChHHHHH-hcCCCCCCCeecCCCCcCCceEEEEEeecCchHHHHHHHHHHHHHHhhcccceeEEEE
Q psy5933 93 KHSKMFNKNFVFNDTALNILH-TRLNINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVI 171 (406)
Q Consensus 93 ~l~G~~~~~~~~~~~~~~~v~-~~~~~~~GG~~~P~~C~~~~kVAIIIPyRnR~~hL~~fL~~L~p~L~rQ~l~y~I~VI 171 (406)
.-+||+.|+|+.+++ |++|+ +||.|++||+|+|++|+|+++||||||||||++||+.||+||||||+||+++|.|+||
T Consensus 11 ~~~gp~~~~~~~~~~-l~~v~~~~~~v~~gG~~~P~~c~~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l~y~I~Vi 89 (287)
T 3lw6_A 11 RGSGPMLIEFNIPVD-LKLVEQQNPKVKLGGRYTPMDGASVHKMALLVPFRDRFEELLQFVPHMTAFLKRQGVAHHIFVL 89 (287)
T ss_dssp -------------------------------------CCCCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCeEEEcCCCCC-HHHHHHhCCCcccCCEECCCccCCcceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCCceEEEEE
Confidence 457999999999988 99999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccccccchhhhhhHHHHHHhhcCCccEEEEecCCCCCCCCceeeeeCC--CcceeEEecccccccCCccccccceeee
Q psy5933 172 EQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTK--QPRHMSVAIDTFNYELPYCTIFGGAIAM 249 (406)
Q Consensus 172 eQ~d~g~FNRakLLNvG~~eA~k~~~~Dc~IFhDVDLIp~~d~nlY~c~~--~PrHlS~~~dkf~yrlpy~~~fGGv~a~ 249 (406)
||.|+.+||||+|||+||.||++ .+||||||||||||++|+|.|.|++ +|+|+|. ++++|++||..+|||++|+
T Consensus 90 eQ~~~~~FNRa~LlNvGf~ea~~--~~d~~ifHDVDLlP~dd~n~Y~c~~~~~P~Hls~--~~~~~~~~Y~~~~GGv~a~ 165 (287)
T 3lw6_A 90 NQVDRFRFNRASLINVGFQFASD--VYDYIAMHDVDLLPLNDNLLYEYPSSLGPLHIAG--PKLHPKYHYDNFVGGILLV 165 (287)
T ss_dssp EECSSSCCCHHHHHHHHHHHSCT--TCCEEEEECTTEEECCTTSCCCCCCTTCCEESSC--TTTCSSCCCTTCCCSEEEE
T ss_pred ecCCCCccchhheecccHHHHhc--cCCEEEEecccccccCCCccccCCCCCCceEEee--ccccCCCCcCCccccEEec
Confidence 99999999999999999999976 6899999999999999999999986 8999986 5789999999999999999
Q ss_pred cHhhhhhcCCCCCCCccCCCCchhHHHHH-HCCCeEEeccc-ceeeEEeccCCC-----cchhHHHHHHHHcCCceeccC
Q psy5933 250 LQHQFRQVNGFSNLYFGWGAEDDDLFQRL-SNYYSICRFSK-QVSEYVMLNHAK-----ETEKLERLEKLENGPFRFKTD 322 (406)
Q Consensus 250 ~kedF~kVNGFdN~fwGWGGEDdDL~~RL-~~Glki~R~~~-~~grY~ml~Hk~-----~~~N~~R~~ll~~~~~r~~~D 322 (406)
+++||.+||||||.|||||+||+||+.|+ .+|+++.|++. .+|||+|+.|.+ ++.+++|++++..+++|+..|
T Consensus 166 ~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~~~~~r~~~d 245 (287)
T 3lw6_A 166 RREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKEMTRKRDHKT 245 (287)
T ss_dssp EHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHHHHTSCCSSC
T ss_pred cHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhhhhcEEccCC
Confidence 99999999999999999999999999999 99999999986 899999999733 234567899999999999999
Q ss_pred cccccccceEEeEEEEe------ceeeEEEeC
Q psy5933 323 GLNTLQNNYTVLAGEAN------GCVTQYKDN 348 (406)
Q Consensus 323 GLnsl~~~Y~vl~~~~~------~lyT~i~~~ 348 (406)
||||| +|++++++.- .+++||.+.
T Consensus 246 GLnsl--~Y~v~s~~~~~i~~~~~~~~nv~l~ 275 (287)
T 3lw6_A 246 GLDNV--KYKILKVHEMLIDQVPVTILNILLD 275 (287)
T ss_dssp SGGGC--CEEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCeee--EEEEEEEEEEEecCCCcEEEEEEEE
Confidence 99999 9999999877 777777443
No 2
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=100.00 E-value=4.7e-60 Score=458.62 Aligned_cols=270 Identities=39% Similarity=0.681 Sum_probs=246.7
Q ss_pred ccccCCCCCCCCCCCc-CCCcceeecccCCCChHHHHH-hcCCCCCCCeecCCCCcCCceEEEEEeecCchHHHHHHHHH
Q psy5933 77 QIKTVNTHTPLCSIFE-KHSKMFNKNFVFNDTALNILH-TRLNINKGGAWEPTDCIPQHQVAIIVPYMNREGQLKTFLLH 154 (406)
Q Consensus 77 ~~~~~~~~~~~Cp~~~-~l~G~~~~~~~~~~~~~~~v~-~~~~~~~GG~~~P~~C~~~~kVAIIIPyRnR~~hL~~fL~~ 154 (406)
+++.....++.||+.| .|+|++.++|+.+.+ +++|+ +||.+++||+|+|++|.+..+||||||+|||+++|+.+|.+
T Consensus 8 ~~~~~~~~~~~c~~~~~~l~g~~~~~~~~~~~-~~~~~~~~~~~~~gg~~~p~~c~~~~~VSIIIP~yN~~~~L~~~L~s 86 (287)
T 2fy7_A 8 QMGRGSASLPACPEESPLLVGPMLIEFNMPVD-LELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYY 86 (287)
T ss_dssp ---CCCCCCCBCCSSCTTCCCBCCCCCCSCCC-HHHHHHHCTTCBTTTEECCSSSBCSCEEEEEEEESSCHHHHHHHHHH
T ss_pred cCCCCCCCCCcCCCCCcCCcCcceecccCCCC-HHHHHhhCCCcccCCcCcCCCCCcCCcEEEEEeeCCCHHHHHHHHHH
Confidence 3445556799999986 999999999998888 99999 89999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccceeEEEEEEccccccchhhhhhHHHHHHhhcCCccEEEEecCCCCCCCCceeeeeCCCcceeEEeccccc
Q psy5933 155 IHQFLQKQFISYQIFVIEQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIYACTKQPRHMSVAIDTFN 234 (406)
Q Consensus 155 L~p~L~rQ~l~y~I~VIeQ~d~g~FNRakLLNvG~~eA~k~~~~Dc~IFhDVDLIp~~d~nlY~c~~~PrHlS~~~dkf~ 234 (406)
++++|++|..+|+|+||++.++++||||+++|.|+.+|++...+||++|+|+|++|+++.+.|.|...|+|++...++++
T Consensus 87 l~~~l~q~~~~~EIiVVdds~d~~f~~a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~~~~~~~~~p~~~~~~~~~~~ 166 (287)
T 2fy7_A 87 LHPVLQRQQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFG 166 (287)
T ss_dssp HHHHHHHTTCEEEEEEEEECSSSCCCHHHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSCCSCCSSCEECCCEEGGGT
T ss_pred HHHHHHHhcCCceEEEEEeCCCCccchhhhhhhHHHHHHHhCCCCEEEEECCCcccCCCcceEecCCCCceEEEeecccc
Confidence 99999999999999999999888999999999999877776789999999999999999999999989999998888889
Q ss_pred ccCCccccccceeeecHhhhhhcCCCCCCCccCCCCchhHHHHH-HCCCeEEecccceeeEEeccCCC---cchhHHHHH
Q psy5933 235 YELPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL-SNYYSICRFSKQVSEYVMLNHAK---ETEKLERLE 310 (406)
Q Consensus 235 yrlpy~~~fGGv~a~~kedF~kVNGFdN~fwGWGGEDdDL~~RL-~~Glki~R~~~~~grY~ml~Hk~---~~~N~~R~~ 310 (406)
|+.||..++||+++++|++|.+||||||.|+|||+||+||..|+ .+|+++.|++...++|.|++|.+ +++|++|++
T Consensus 167 ~~~~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~ 246 (287)
T 2fy7_A 167 FSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFD 246 (287)
T ss_dssp TSCSSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCC
T ss_pred cCCCcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHH
Confidence 99999999999999999999999999999999999999999999 99999999988789999999944 457888999
Q ss_pred HHHcCCceeccCcccccccceEEeEEEEeceeeEEEeCC
Q psy5933 311 KLENGPFRFKTDGLNTLQNNYTVLAGEANGCVTQYKDNS 349 (406)
Q Consensus 311 ll~~~~~r~~~DGLnsl~~~Y~vl~~~~~~lyT~i~~~~ 349 (406)
.+.+.+.+|+.|||+++ +|++++++.+||||||+|++
T Consensus 247 ~l~~~~~~~~~~Gl~~~--~y~~~~~~~~~l~t~~~v~~ 283 (287)
T 2fy7_A 247 RIAHTKETMLSDGLNSL--TYQVLDVQRYPLYTQITVDI 283 (287)
T ss_dssp CHHHHHHHTTTSSGGGC--CCEEEEEEEETTEEEEEEEC
T ss_pred HHhhcccEEcCCCcccC--ceEEEEEEeccCeEEEEEEe
Confidence 99999999999999999 99999999999999994443
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.46 E-value=3.1e-13 Score=135.59 Aligned_cols=150 Identities=12% Similarity=0.157 Sum_probs=105.3
Q ss_pred CceEEEEEeecCch-HHHHHHHHHHHHHHhhc--ccceeEEEEEEccc-------------------------cccchhh
Q psy5933 132 QHQVAIIVPYMNRE-GQLKTFLLHIHQFLQKQ--FISYQIFVIEQRHP-------------------------AEFNRGK 183 (406)
Q Consensus 132 ~~kVAIIIPyRnR~-~hL~~fL~~L~p~L~rQ--~l~y~I~VIeQ~d~-------------------------g~FNRak 183 (406)
..+|+||||+||++ +.|..+|..+. .+. ...++|+||..... .....+.
T Consensus 28 ~p~vSVIIp~yN~~~~~l~~~l~Sl~---~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~G~~~ 104 (472)
T 1xhb_A 28 LPTTSVVIVFHNEAWSTLLRTVHSVI---NRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIR 104 (472)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHH---HSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHH
T ss_pred CCCeEEEEEeCCCCHHHHHHHHHHHH---hcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCCChHH
Confidence 45799999999999 99999988774 322 23478888864321 1255678
Q ss_pred hhhHHHHHHhhcCCccEEEEecCCCCCCCCcee------------eeeCC------Cccee-------EEecc-ccccc-
Q psy5933 184 LLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNI------------YACTK------QPRHM-------SVAID-TFNYE- 236 (406)
Q Consensus 184 LLNvG~~eA~k~~~~Dc~IFhDVDLIp~~d~nl------------Y~c~~------~PrHl-------S~~~d-kf~yr- 236 (406)
++|.|+..| ..|+++|.|.|.++.++..- ..|+. ..... ....+ ...+.
T Consensus 105 a~N~g~~~A----~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (472)
T 1xhb_A 105 ARLKGAAVS----RGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRW 180 (472)
T ss_dssp HHHHHHHHC----CSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEE
T ss_pred HHHHHHHhc----cCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeec
Confidence 899999987 57999999999998887530 11110 00000 00000 00000
Q ss_pred --C--------------C--ccccccceeeecHhhhhhcCCCCCCCccCCCCchhHHHHH-HCCCeEEecc
Q psy5933 237 --L--------------P--YCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL-SNYYSICRFS 288 (406)
Q Consensus 237 --l--------------p--y~~~fGGv~a~~kedF~kVNGFdN~fwGWGGEDdDL~~RL-~~Glki~R~~ 288 (406)
+ + .....||.++++++.|.+++|||+.|.+||+||.||..|+ .+|.++.-.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p 251 (472)
T 1xhb_A 181 YPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVT 251 (472)
T ss_dssp EECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEE
T ss_pred ccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEcc
Confidence 0 1 1234589999999999999999999999999999999999 9999988754
No 4
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.41 E-value=6.5e-13 Score=138.29 Aligned_cols=158 Identities=15% Similarity=0.177 Sum_probs=109.9
Q ss_pred ecCCCCcC------CceEEEEEeecCch-HHHHHHHHHHHHHHhhcc--cceeEEEEEEcc-------------------
Q psy5933 124 WEPTDCIP------QHQVAIIVPYMNRE-GQLKTFLLHIHQFLQKQF--ISYQIFVIEQRH------------------- 175 (406)
Q Consensus 124 ~~P~~C~~------~~kVAIIIPyRnR~-~hL~~fL~~L~p~L~rQ~--l~y~I~VIeQ~d------------------- 175 (406)
.+++.|.. ..+|+||||+||+. +.|...|..+. .+.. +.++|+||....
T Consensus 97 ~r~~~~~~~~~~~~~P~vSVIIp~yNe~~~~L~~~L~Sll---~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v 173 (570)
T 2d7i_A 97 IRHPNCNSKRYLETLPNTSIIIPFHNEGWSSLLRTVHSVL---NRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSV 173 (570)
T ss_dssp CSCGGGGTCCEESSCCCEEEEEEESSCCHHHHHHHHHHHH---HHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTE
T ss_pred CCCccceecccCCCCCCeEEEEEECCCCHHHHHHHHHHHH---hcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeE
Confidence 35667763 35899999999998 88887777663 4332 346899887432
Q ss_pred -----ccccchhhhhhHHHHHHhhcCCccEEEEecCCCCCCCCcee------------eeeCC------CcceeE-----
Q psy5933 176 -----PAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNI------------YACTK------QPRHMS----- 227 (406)
Q Consensus 176 -----~g~FNRakLLNvG~~eA~k~~~~Dc~IFhDVDLIp~~d~nl------------Y~c~~------~PrHlS----- 227 (406)
...+..+.++|.|++.| ..|+++|.|.|.++.++..- ..|+. ......
T Consensus 174 ~vi~~~~n~G~~~A~N~G~~~A----~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~ 249 (570)
T 2d7i_A 174 RILRTKKREGLIRTRMLGASVA----TGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGD 249 (570)
T ss_dssp EEEECSSCCCHHHHHHHHHHHC----CSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTS
T ss_pred EEEECCCCCCHHHHHHHHHHhc----CCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCC
Confidence 12366789999999988 57999999999999877531 11110 000000
Q ss_pred ---Eecc-cccc--------------cCC--ccccccceeeecHhhhhhcCCCCCCCccCCCCchhHHHHH-HCCCeEEe
Q psy5933 228 ---VAID-TFNY--------------ELP--YCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL-SNYYSICR 286 (406)
Q Consensus 228 ---~~~d-kf~y--------------rlp--y~~~fGGv~a~~kedF~kVNGFdN~fwGWGGEDdDL~~RL-~~Glki~R 286 (406)
...+ .+.+ ..| .....||.++++++.|.+++|||+.|.+||+||.||..|+ .+|.++.-
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~ 329 (570)
T 2d7i_A 250 AMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMED 329 (570)
T ss_dssp SCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred cccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEE
Confidence 0000 0000 001 1124589999999999999999999999999999999999 99999887
Q ss_pred cc
Q psy5933 287 FS 288 (406)
Q Consensus 287 ~~ 288 (406)
.+
T Consensus 330 ~p 331 (570)
T 2d7i_A 330 IP 331 (570)
T ss_dssp EE
T ss_pred cc
Confidence 55
No 5
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.39 E-value=1.2e-12 Score=133.05 Aligned_cols=150 Identities=13% Similarity=0.152 Sum_probs=106.0
Q ss_pred CceEEEEEeecCchH-HHHHHHHHHHHHHhhc--ccceeEEEEEEcc--------------------ccccchhhhhhHH
Q psy5933 132 QHQVAIIVPYMNREG-QLKTFLLHIHQFLQKQ--FISYQIFVIEQRH--------------------PAEFNRGKLLNIG 188 (406)
Q Consensus 132 ~~kVAIIIPyRnR~~-hL~~fL~~L~p~L~rQ--~l~y~I~VIeQ~d--------------------~g~FNRakLLNvG 188 (406)
..+|+||||+||+++ .|...|..+. .+. ...++|+||.... ...+..+.++|.|
T Consensus 65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~---~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~~~v~vi~~~~n~G~~~A~N~G 141 (501)
T 2ffu_A 65 LPATSVVITFHNEARSALLRTVVSVL---KKSPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRREGLMRSRVRG 141 (501)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHH---HHSCGGGEEEEEEEECSCSCTHHHHGGGGBTTEEEEECSSCCHHHHHHHHH
T ss_pred CCCEEEEEEeCcCcHHHHHHHHHHHH---hhCchhhceeEEEEECCCCchHHHHHHhcCCCEEEEECCCCcCHHHHHHHH
Confidence 457999999999987 8888877664 332 2347999997532 1236678899999
Q ss_pred HHHHhhcCCccEEEEecCCCCCCCCcee------------eeeCC------Cc-------ceeEEecc-cccc-------
Q psy5933 189 YIEALKIKPFHCFIFHDVDLMPTNPNNI------------YACTK------QP-------RHMSVAID-TFNY------- 235 (406)
Q Consensus 189 ~~eA~k~~~~Dc~IFhDVDLIp~~d~nl------------Y~c~~------~P-------rHlS~~~d-kf~y------- 235 (406)
+..| .+|+++|.|.|..+.++... ..|+. .. ..+..... ...+
T Consensus 142 ~~~A----~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (501)
T 2ffu_A 142 ADAA----QAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTP 217 (501)
T ss_dssp HHHC----CSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCH
T ss_pred HHhc----CCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCH
Confidence 9988 57999999999998877420 11110 00 00000000 0000
Q ss_pred ----------cCCc--cccccceeeecHhhhhhcCCCCCCCccCCCCchhHHHHH-HCCCeEEecc
Q psy5933 236 ----------ELPY--CTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL-SNYYSICRFS 288 (406)
Q Consensus 236 ----------rlpy--~~~fGGv~a~~kedF~kVNGFdN~fwGWGGEDdDL~~RL-~~Glki~R~~ 288 (406)
..|. ....||.++++++.|.+++|||+.|..||+||.||..|+ ..|.++...+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p 283 (501)
T 2ffu_A 218 EQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIP 283 (501)
T ss_dssp HHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEcc
Confidence 0011 134589999999999999999999999999999999999 9999988765
No 6
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.38 E-value=1.8e-12 Score=134.21 Aligned_cols=152 Identities=18% Similarity=0.282 Sum_probs=108.9
Q ss_pred CCceEEEEEeecCchHHHHHHHHHHHHHHhhcc--cceeEEEEEEccc-----------------------cccchhhhh
Q psy5933 131 PQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQF--ISYQIFVIEQRHP-----------------------AEFNRGKLL 185 (406)
Q Consensus 131 ~~~kVAIIIPyRnR~~hL~~fL~~L~p~L~rQ~--l~y~I~VIeQ~d~-----------------------g~FNRakLL 185 (406)
...+|+||||.||+.+.|..+|..+. +|. ..++|+||..... ..+.++.++
T Consensus 91 ~~p~vsviIp~~n~~~~l~~~l~sl~----~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~ 166 (625)
T 2z86_A 91 IIDGLSIVIPTYNRAKILAITLACLC----NQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVR 166 (625)
T ss_dssp CCCCEEEEEEESSCHHHHHHHHHHHH----TCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHH
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHH----hhccCCCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHH
Confidence 45689999999999999999988773 332 3688888865321 124478999
Q ss_pred hHHHHHHhhcCCccEEEEecCCCCCCCCceee--e----eCC----CcceeEEecc------------------------
Q psy5933 186 NIGYIEALKIKPFHCFIFHDVDLMPTNPNNIY--A----CTK----QPRHMSVAID------------------------ 231 (406)
Q Consensus 186 NvG~~eA~k~~~~Dc~IFhDVDLIp~~d~nlY--~----c~~----~PrHlS~~~d------------------------ 231 (406)
|.|+..| .+|+++|.|.|.++.++.... . .+. .++.......
T Consensus 167 N~g~~~a----~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (625)
T 2z86_A 167 NLGLRAA----KYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQ 242 (625)
T ss_dssp HHHHHHC----CSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC------
T ss_pred HHHHHhC----CcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCc
Confidence 9999987 679999999999998874310 0 000 1111100000
Q ss_pred -----------ccc------------ccCCccccccceeeecHhhhhhcCCCCCCCccCCCCchhHHHHH-HCCCeEEec
Q psy5933 232 -----------TFN------------YELPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL-SNYYSICRF 287 (406)
Q Consensus 232 -----------kf~------------yrlpy~~~fGGv~a~~kedF~kVNGFdN~fwGWGGEDdDL~~RL-~~Glki~R~ 287 (406)
.|. ...++..+.|+.++++++.|.+++|||+.|.+||+||.||..|+ .+|.++...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~ 322 (625)
T 2z86_A 243 VAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSV 322 (625)
T ss_dssp ---------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEEC
T ss_pred hhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEc
Confidence 000 00122346789999999999999999999999999999999999 999998876
Q ss_pred ccc
Q psy5933 288 SKQ 290 (406)
Q Consensus 288 ~~~ 290 (406)
+..
T Consensus 323 p~~ 325 (625)
T 2z86_A 323 EGA 325 (625)
T ss_dssp GGG
T ss_pred ccc
Confidence 643
No 7
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.28 E-value=1.5e-11 Score=114.49 Aligned_cols=148 Identities=9% Similarity=0.014 Sum_probs=102.8
Q ss_pred CceEEEEEeecCchHHHHHHHHHHHHHHhhcccceeEEEEEEccccccchhhhhhHHHHHHhhcCCccEEEEecCCCCCC
Q psy5933 132 QHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPT 211 (406)
Q Consensus 132 ~~kVAIIIPyRnR~~hL~~fL~~L~p~L~rQ~l~y~I~VIeQ~d~g~FNRakLLNvG~~eA~k~~~~Dc~IFhDVDLIp~ 211 (406)
...+||| |.+|+.+.|+.+|..+..-+..|.. |+|+||..........|.++|.|++.| .+|+++|.|.|.++.
T Consensus 15 ~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d~~g~a~a~N~Gi~~A----~g~yl~fln~D~~~~ 88 (249)
T 2nxv_A 15 TLMFSVC-SLVRDQAKYDRLLESFERFGFTPDK-AEFLAADNREGNQFHGFSWHKQMLPRC----KGRYVIFCHEDVELV 88 (249)
T ss_dssp CCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTT-EEEEEEECTTSCSCCTTTHHHHHGGGC----CSSEEEEEETTEECS
T ss_pred cceEEEE-EeeCCHHHHHHHHHHHHHhccCCCc-EEEEEEECCCCCcccHHHHHHHHHHhc----CCCEEEEECCCcccC
Confidence 3568875 5689999999999988755555544 999999876654467799999999987 579999999999987
Q ss_pred CCce--eeee-CC----CcceeEE-----ecc---c------ccccCCc-------------cccccceeeecHhhhhhc
Q psy5933 212 NPNN--IYAC-TK----QPRHMSV-----AID---T------FNYELPY-------------CTIFGGAIAMLQHQFRQV 257 (406)
Q Consensus 212 ~d~n--lY~c-~~----~PrHlS~-----~~d---k------f~yrlpy-------------~~~fGGv~a~~kedF~kV 257 (406)
++.. +..+ .. .|..-.+ ..+ + .....|+ ...-|+.++++++. +
T Consensus 89 ~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~rr~~---~ 165 (249)
T 2nxv_A 89 DRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSVTAQALHISDVFGNDRRRGNVPCRVESLDECFLLMRRLK---P 165 (249)
T ss_dssp SCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTSCCCEEEEEETTEEEEEESCSSEEEEEECTTEEEEETTB---C
T ss_pred ccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCceeeecccccCCccccccccCCCceEcCeeeeEeeEEEHhh---h
Confidence 7742 1111 00 0211000 000 0 0000111 11236778888877 7
Q ss_pred CCCCCCCccCCCCchhHHHHH-HCCCeEEecc
Q psy5933 258 NGFSNLYFGWGAEDDDLFQRL-SNYYSICRFS 288 (406)
Q Consensus 258 NGFdN~fwGWGGEDdDL~~RL-~~Glki~R~~ 288 (406)
+|||+.+.||+.||.|+..|+ .+|.++.-.+
T Consensus 166 ~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p 197 (249)
T 2nxv_A 166 VLNSYDMQGFHYYGADLCLQAEFLGGRAYAID 197 (249)
T ss_dssp CCCCSSCCSSSSHHHHHHHHHHHTTCEEEECC
T ss_pred CCCCCCCCCcceehhHHHHHHHHcCCeEEEec
Confidence 899999999999999999999 9999887754
No 8
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.26 E-value=2.6e-11 Score=108.71 Aligned_cols=154 Identities=17% Similarity=0.218 Sum_probs=99.5
Q ss_pred ceEEEEEeecCchHHHHHHHHHHHHHHhhcccceeEEEEEEccc----------------------cccchhhhhhHHHH
Q psy5933 133 HQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHP----------------------AEFNRGKLLNIGYI 190 (406)
Q Consensus 133 ~kVAIIIPyRnR~~hL~~fL~~L~p~L~rQ~l~y~I~VIeQ~d~----------------------g~FNRakLLNvG~~ 190 (406)
.+|+||||.||+++.|+.+|..+. ++..-+++|+||..... .....+.++|.|+.
T Consensus 5 p~vsViIp~yn~~~~l~~~l~Sl~---~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~~~n~G~~~a~N~g~~ 81 (240)
T 3bcv_A 5 PKVSVIVPIYNVEKYLDQCVQALL---AQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIHKKNAGLGMACNSGLD 81 (240)
T ss_dssp CSEEEEEEESSCTTTHHHHHHHHH---TCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEECCCCCHHHHHHHHHH
T ss_pred CcEEEEEecCCCHHHHHHHHHHHH---hCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEECCCCChHHHHHHHHH
Confidence 479999999999999999998873 33334678888864321 12456788999999
Q ss_pred HHhhcCCccEEEEecCCCCCCCCcee-------------eeeCC-----Ccc---eeE------Eeccc--c-cc--cC-
Q psy5933 191 EALKIKPFHCFIFHDVDLMPTNPNNI-------------YACTK-----QPR---HMS------VAIDT--F-NY--EL- 237 (406)
Q Consensus 191 eA~k~~~~Dc~IFhDVDLIp~~d~nl-------------Y~c~~-----~Pr---HlS------~~~dk--f-~y--rl- 237 (406)
.| ..|+++|.|.|.++.++..- ..+.. ... .+. ..... . .+ ..
T Consensus 82 ~a----~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (240)
T 3bcv_A 82 VA----TGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLI 157 (240)
T ss_dssp HC----CSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGT
T ss_pred Hc----CCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHh
Confidence 88 56999999999999888521 01110 000 000 00000 0 00 00
Q ss_pred ---Cc------cccccceeeecHhhhhhcC-CCCCCCccCCCCchhHHHHH-HCCCeEEecccceeeE
Q psy5933 238 ---PY------CTIFGGAIAMLQHQFRQVN-GFSNLYFGWGAEDDDLFQRL-SNYYSICRFSKQVSEY 294 (406)
Q Consensus 238 ---py------~~~fGGv~a~~kedF~kVN-GFdN~fwGWGGEDdDL~~RL-~~Glki~R~~~~~grY 294 (406)
+. ....|+.+++.++-|.++| ||++.+. +++||.||..|+ .+|.++.-.+.....|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~-~~~eD~~~~~r~~~~g~~i~~~~~~~~~y 224 (240)
T 3bcv_A 158 ASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERI-LPSEDLIFNVDVLANSNIVCVLPQTFYNY 224 (240)
T ss_dssp SSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTT-CTTHHHHHHHHHHTTCSCEEECC------
T ss_pred hcchhhccccccccchhheeeeHHHHHHcCCccCCCCC-ccCCCHHHHHHHHHhCCEEEEECCCeEEE
Confidence 00 0023678899999999999 9999864 345999999999 9999888766443333
No 9
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.16 E-value=1e-10 Score=105.98 Aligned_cols=152 Identities=13% Similarity=0.199 Sum_probs=99.6
Q ss_pred ceEEEEEeecCchHHHHHHHHHHHHHHhhcccceeEEEEEEccc------------------------------cccchh
Q psy5933 133 HQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHP------------------------------AEFNRG 182 (406)
Q Consensus 133 ~kVAIIIPyRnR~~hL~~fL~~L~p~L~rQ~l~y~I~VIeQ~d~------------------------------g~FNRa 182 (406)
++|+||||.||+.+.|+.+|..+. ++..-+++|+||..... .....+
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~---~q~~~~~eiivvDd~S~d~t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G~~ 77 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSIL---SQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKTRYA 77 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHH---TCSCCCEEEEEEECSCCHHHHHHHGGGGGSTTEEEEECCCCSHHHHHSSCHHH
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHH---hccCCceEEEEEECCCCchHHHHHHHHhhcCCEEEEecccccccccccccCHH
Confidence 369999999999999999998873 33334678888764321 134567
Q ss_pred hhhhHHHHHHhhcCCccEEEEecCCCCCCCCceee------eeCC---------------CcceeEEecccc-ccc-CCc
Q psy5933 183 KLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNIY------ACTK---------------QPRHMSVAIDTF-NYE-LPY 239 (406)
Q Consensus 183 kLLNvG~~eA~k~~~~Dc~IFhDVDLIp~~d~nlY------~c~~---------------~PrHlS~~~dkf-~yr-lpy 239 (406)
.++|.|+..| .+|+++|.|.|.++.++.... ..++ ....+....... ... ...
T Consensus 78 ~a~N~gi~~a----~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
T 1qg8_A 78 ALINQAIEMA----EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQVTWNAP 153 (255)
T ss_dssp HHHHHHHHHC----CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCCSCBSCCT
T ss_pred HHHHHHHHHc----CCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccCchHHHHHhhc
Confidence 7899999987 679999999999998875310 0000 000000000000 000 112
Q ss_pred cccccceeeecHhhhhhcC-CC------CCCCccCCCCchhHHHHH-HCCCeEEecccceeeE
Q psy5933 240 CTIFGGAIAMLQHQFRQVN-GF------SNLYFGWGAEDDDLFQRL-SNYYSICRFSKQVSEY 294 (406)
Q Consensus 240 ~~~fGGv~a~~kedF~kVN-GF------dN~fwGWGGEDdDL~~RL-~~Glki~R~~~~~grY 294 (406)
....|+.+++.++-|.+++ || ++.+ +++||.||..|+ ..| ++...+.....|
T Consensus 154 ~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~--~~~eD~~~~~r~~~~g-~~~~~~~~~~~~ 213 (255)
T 1qg8_A 154 CAIDHCSVMHRYSVLEKVKEKFGSYWDESPAF--YRIGDARFFWRVNHFY-PFYPLDEELDLN 213 (255)
T ss_dssp TTSCGGGEEEETHHHHHHHHHHSSSSCCCGGG--STTHHHHHHHHHTTTC-CBEEEEEEEEEE
T ss_pred CCCccceEEEEHHHHHhhcccccccccCCccc--chHHHHHHHHHHHHhC-CEEEecCcEEEE
Confidence 3355788999999999999 89 5554 678999999999 877 555544443444
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.15 E-value=1.2e-10 Score=124.26 Aligned_cols=162 Identities=16% Similarity=0.207 Sum_probs=108.9
Q ss_pred CCee-cCCCCcCCceEEEEEeecCchHHHHHHHHHHHHHHhhcc----cceeEEEEEEcccc------------------
Q psy5933 121 GGAW-EPTDCIPQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQF----ISYQIFVIEQRHPA------------------ 177 (406)
Q Consensus 121 GG~~-~P~~C~~~~kVAIIIPyRnR~~hL~~fL~~L~p~L~rQ~----l~y~I~VIeQ~d~g------------------ 177 (406)
+|.| .|..=....+|+||||.|||.+.|..+|..+ .+|. ..++|+||.+....
T Consensus 167 ~~~w~~~~~~~~~pkVSVVIptYN~~~~L~~~L~SL----~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~~I 242 (657)
T 4fix_A 167 SGGWYATSPAPGTANIAVGIPTFNRPADCVNALREL----TADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRL 242 (657)
T ss_dssp EEEEECSSCCCSCCCEEEECCBSSCHHHHHHHHHHH----TTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGGGE
T ss_pred eeEEeCCCCCCCCCeEEEEEEecCCHHHHHHHHHHH----HcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCCCE
Confidence 4555 3444344578999999999999999999987 3343 34688888765421
Q ss_pred -----c-cchhhhhhHHHHHHhhcCCccEEEEecCCCCCCCCcee--e----------ee------CCCcceeE---Eec
Q psy5933 178 -----E-FNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNI--Y----------AC------TKQPRHMS---VAI 230 (406)
Q Consensus 178 -----~-FNRakLLNvG~~eA~k~~~~Dc~IFhDVDLIp~~d~nl--Y----------~c------~~~PrHlS---~~~ 230 (406)
+ ...|.++|.|+.+|.++.++|+++|.|.|.+++++... . .+ ...+..+. ...
T Consensus 243 ~vI~~~N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~ 322 (657)
T 4fix_A 243 SIHDQPNLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVV 322 (657)
T ss_dssp EEEECCCCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEe
Confidence 2 22356789999999875578999999999999988420 0 00 01111110 000
Q ss_pred c--c--------------cc---cc------------CCccccccceeeecHhhhhhcCCCCCCCccCCCCchhHHHHH-
Q psy5933 231 D--T--------------FN---YE------------LPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL- 278 (406)
Q Consensus 231 d--k--------------f~---yr------------lpy~~~fGGv~a~~kedF~kVNGFdN~fwGWGGEDdDL~~RL- 278 (406)
+ . |. .+ .+....-|+.+++.++-|.+||||++.|..| ||.|+..|+
T Consensus 323 ~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~--ED~Dl~lR~~ 400 (657)
T 4fix_A 323 DRSIFMWTAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKW--DDADYGLRAA 400 (657)
T ss_dssp ETTTTEEEECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSS--HHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChhHhccC--cHHHHHHHHH
Confidence 0 0 00 00 0111234678999999999999999766655 999999999
Q ss_pred HCCCeEEecc
Q psy5933 279 SNYYSICRFS 288 (406)
Q Consensus 279 ~~Glki~R~~ 288 (406)
.+|.++.-.+
T Consensus 401 ~~G~ki~~~p 410 (657)
T 4fix_A 401 EHGYPTVTLP 410 (657)
T ss_dssp HTTCCEEEEE
T ss_pred HcCCeEEEEC
Confidence 9999987755
No 11
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=98.99 E-value=4.7e-09 Score=108.70 Aligned_cols=149 Identities=13% Similarity=0.089 Sum_probs=100.8
Q ss_pred CceEEEEEeecCchHHHHHHHHHHHHHHhhcccceeEEEEEEccc----------------------cccchhhhhhHHH
Q psy5933 132 QHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHP----------------------AEFNRGKLLNIGY 189 (406)
Q Consensus 132 ~~kVAIIIPyRnR~~hL~~fL~~L~p~L~rQ~l~y~I~VIeQ~d~----------------------g~FNRakLLNvG~ 189 (406)
..+|+||||.||+.+.|+.+|..+. .+..-+++|+||..... .....+.++|.|+
T Consensus 374 ~~~vsiii~~yn~~~~l~~~l~s~~---~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~~~n~G~~~a~n~g~ 450 (625)
T 2z86_A 374 VPLVSIYIPAYNCSKYIVRCVESAL---NQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAV 450 (625)
T ss_dssp SCSEEEEEEESSCTTTHHHHHHHHH---SSSCCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEEECCCCHHHHHHHHH
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHHH---hCcCCCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEeCCCCCHHHHHHHHH
Confidence 4579999999999999999988773 33334678888865321 1244677899999
Q ss_pred HHHhhcCCccEEEEecCCCCCCCCcee--ee-eCCCcce--e-E--Eeccc---c---cccC--------Ccccccccee
Q psy5933 190 IEALKIKPFHCFIFHDVDLMPTNPNNI--YA-CTKQPRH--M-S--VAIDT---F---NYEL--------PYCTIFGGAI 247 (406)
Q Consensus 190 ~eA~k~~~~Dc~IFhDVDLIp~~d~nl--Y~-c~~~PrH--l-S--~~~dk---f---~yrl--------py~~~fGGv~ 247 (406)
..| .+|+++|.|.|.++.++..- .. ....|.. . + ...+. . .+.. ....+.|+.+
T Consensus 451 ~~a----~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (625)
T 2z86_A 451 RLC----RGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFR 526 (625)
T ss_dssp HHC----CSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECCCCSSCCHHHHTTSCCCCSCE
T ss_pred Hhc----CCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCcccccCCHHHHhhcccCCceE
Confidence 987 57999999999999888531 00 0001100 0 0 00000 0 0111 1123456788
Q ss_pred eecHhhhhhcCCCCCCCccCCCCchhHHHHH-HCCCeEEecccc
Q psy5933 248 AMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL-SNYYSICRFSKQ 290 (406)
Q Consensus 248 a~~kedF~kVNGFdN~fwGWGGEDdDL~~RL-~~Glki~R~~~~ 290 (406)
++.++.|.+++||++.|. ++||.||..|+ .+| ++...+..
T Consensus 527 ~~~r~~~~~~ggfd~~~~--~~eD~dl~~r~~~~g-~~~~~~~~ 567 (625)
T 2z86_A 527 MFTARAWNLTEGFNESIS--NAVDYDMYLKLSEVG-PFKHINKI 567 (625)
T ss_dssp EEEHHHHTTTTCCCSSCS--SCHHHHHHHHHTTTS-CEEEEEEE
T ss_pred EEEHHHHHHhCCCCCccC--ChHHHHHHHHHHHhC-CEEEeCCc
Confidence 899999999999999987 56999999999 999 77665543
No 12
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=98.50 E-value=1.3e-08 Score=108.42 Aligned_cols=146 Identities=16% Similarity=0.172 Sum_probs=0.0
Q ss_pred ceEEEEEeecCchHHHHHHHHHHHHHHhhcccceeEEEEEEcc------------------------ccccchhhhhhHH
Q psy5933 133 HQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRH------------------------PAEFNRGKLLNIG 188 (406)
Q Consensus 133 ~kVAIIIPyRnR~~hL~~fL~~L~p~L~rQ~l~y~I~VIeQ~d------------------------~g~FNRakLLNvG 188 (406)
.+|+||||.||+++.|+.+|..+. .+..-+++|+||.... ......|.++|.|
T Consensus 2 p~vSVIIp~yN~~~~L~~~L~Sll---~Qt~~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~g 78 (729)
T 3l7i_A 2 NKLTIIVTYYNAEEYITGCLESIK---QQRTQDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNIA 78 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEcCCCHHHHHHHHHHHH---hCCCCCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHH
Confidence 469999999999999999988773 3333467777774321 0123457889999
Q ss_pred HHHHhhcCCccEEEEecCCCCCCCCceee--eeCCCcce-------eEEe------cccc--cc-------cCCcccccc
Q psy5933 189 YIEALKIKPFHCFIFHDVDLMPTNPNNIY--ACTKQPRH-------MSVA------IDTF--NY-------ELPYCTIFG 244 (406)
Q Consensus 189 ~~eA~k~~~~Dc~IFhDVDLIp~~d~nlY--~c~~~PrH-------lS~~------~dkf--~y-------rlpy~~~fG 244 (406)
+..| .+|+++|.|.|.++.++..-- ..-..+.- +... .... .+ ........|
T Consensus 79 i~~A----~gdyI~flD~Dd~~~p~~l~~l~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (729)
T 3l7i_A 79 LEEV----ETPYFMFLDADDELASYAITFYLEKFNNTDGLIAPIHSFTTQRPQFVDLDRVRVEYFNAKENINSFLRKQSA 154 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhc----cCCEEEEECCCCCCChhHHHHHHHHhcCCCEEEEeeEEeecCCCccccccceeeeeecchhhHHHHhhccch
Confidence 9988 568999999999998885311 00000000 0000 0000 00 001123356
Q ss_pred ceeeecHhhhhhcC-CCCCCCccCCCCchhHHHHH-HCCCeEEec
Q psy5933 245 GAIAMLQHQFRQVN-GFSNLYFGWGAEDDDLFQRL-SNYYSICRF 287 (406)
Q Consensus 245 Gv~a~~kedF~kVN-GFdN~fwGWGGEDdDL~~RL-~~Glki~R~ 287 (406)
+.+++.++-+.+++ ||++.+. .+||.||..|+ .+|.++...
T Consensus 155 ~~~~~rr~~l~~~gl~fde~~~--~~ED~d~~~rl~~~g~~i~~~ 197 (729)
T 3l7i_A 155 CNIIFRTAIVRAHHIRFNENLN--TYVDWSFVLEYMKYVNKFVRI 197 (729)
T ss_dssp ---------------------------------------------
T ss_pred hheeeeHHHHHHcCCCcCCCCC--cccCHHHHHHHHHhcCCEEEe
Confidence 78899999999999 9999984 37999999999 999887766
No 13
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=98.50 E-value=2.9e-07 Score=99.96 Aligned_cols=146 Identities=14% Similarity=0.164 Sum_probs=97.4
Q ss_pred CceEEEEEeecCchHHH-HHHHHHHHHHHhhccc---ceeEEEEEEcc--------------------------------
Q psy5933 132 QHQVAIIVPYMNREGQL-KTFLLHIHQFLQKQFI---SYQIFVIEQRH-------------------------------- 175 (406)
Q Consensus 132 ~~kVAIIIPyRnR~~hL-~~fL~~L~p~L~rQ~l---~y~I~VIeQ~d-------------------------------- 175 (406)
..+|+||||.||.+..+ +..|..+. +|.. .++|+|+....
T Consensus 139 ~P~VSViIPtyNe~~~lL~~~L~Sl~----~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v 214 (802)
T 4hg6_A 139 LPTVDILVPSYNEPADMLSVTLAAAK----NMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGV 214 (802)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHH----TSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCcEEEEEEECCCCHHHHHHHHHHHH----hccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCc
Confidence 35899999999998765 88888773 3432 27888886431
Q ss_pred ------ccccchhhhhhHHHHHHhhcCCccEEEEecCCCCCCCCcee-------------eeeCC----CcceeEEeccc
Q psy5933 176 ------PAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMPTNPNNI-------------YACTK----QPRHMSVAIDT 232 (406)
Q Consensus 176 ------~g~FNRakLLNvG~~eA~k~~~~Dc~IFhDVDLIp~~d~nl-------------Y~c~~----~PrHlS~~~dk 232 (406)
+..-.|+..+|.|++.| ++|+++|.|.|.++.+|... ..|.. .+.........
T Consensus 215 ~~i~~~~~~~GKa~alN~gl~~a----~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~ 290 (802)
T 4hg6_A 215 VYSTRERNEHAKAGNMSAALERL----KGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLAL 290 (802)
T ss_dssp EEEECSSCCSHHHHHHHHHHHHC----CCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTC
T ss_pred EEEEecCCCCcchHHHHHHHHhc----CCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhH
Confidence 11134566799999987 67999999999999888531 01110 00000000000
Q ss_pred cc---------cc--------CCccccccceeeecHhhhhhcCCCCCCCccCCCCchhHHHHH-HCCCeEEecc
Q psy5933 233 FN---------YE--------LPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL-SNYYSICRFS 288 (406)
Q Consensus 233 f~---------yr--------lpy~~~fGGv~a~~kedF~kVNGFdN~fwGWGGEDdDL~~RL-~~Glki~R~~ 288 (406)
+. +. .....+.|+.+++.++.|.+++||++...+ ||.|+..|+ ..|.++.-.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~~~~~~---ED~~l~~rl~~~G~ri~~~~ 361 (802)
T 4hg6_A 291 GDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFAGETIT---EDAETALEIHSRGWKSLYID 361 (802)
T ss_dssp CTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCCCSSSS---HHHHHHHHHHTTTCCEEECC
T ss_pred HhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHcCCcCCCCcc---hHHHHHHHHHHcCCeEEEec
Confidence 00 00 001224588899999999999999987754 999999999 9999876654
No 14
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=98.48 E-value=1.2e-07 Score=95.07 Aligned_cols=148 Identities=12% Similarity=0.157 Sum_probs=100.6
Q ss_pred CceEEEEEeecCchHHHHHHHHHHHHHHhhcccceeEEEEEEccc-------------------------cccchhhhhh
Q psy5933 132 QHQVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHP-------------------------AEFNRGKLLN 186 (406)
Q Consensus 132 ~~kVAIIIPyRnR~~hL~~fL~~L~p~L~rQ~l~y~I~VIeQ~d~-------------------------g~FNRakLLN 186 (406)
..+|+||||.||.++.|..+|..+...+++....++|+||..... ....+|.++|
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A~n 172 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDAMW 172 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHHHH
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCCHHHHHH
Confidence 467999999999999999999999877776667899999974321 1345778888
Q ss_pred HHHHHHhhcCCccEEEEecCCCC-CCCCce--ee-eeCCCcc-eeEEe------------cccc-------------c--
Q psy5933 187 IGYIEALKIKPFHCFIFHDVDLM-PTNPNN--IY-ACTKQPR-HMSVA------------IDTF-------------N-- 234 (406)
Q Consensus 187 vG~~eA~k~~~~Dc~IFhDVDLI-p~~d~n--lY-~c~~~Pr-HlS~~------------~dkf-------------~-- 234 (406)
.|+..| .+|+++|.|.|.. +.++.. +. .+...|. .+... ...+ +
T Consensus 173 ~G~~~A----~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~~~~~~l~~~~ 248 (387)
T 3f1y_A 173 RALSVT----RGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTELTAKPLFNLF 248 (387)
T ss_dssp HHTTTC----CSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHHHHHTHHHHHHHH
T ss_pred HHHHhc----CCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCchhhhhHHHHHHHH
Confidence 888876 6799999999999 666642 00 0100110 00000 0000 0
Q ss_pred --ccCCccccccceeeecHhhhhhcCCCCCCCccCCCCchhHHHHH--HCCCe-EEecc
Q psy5933 235 --YELPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL--SNYYS-ICRFS 288 (406)
Q Consensus 235 --yrlpy~~~fGGv~a~~kedF~kVNGFdN~fwGWGGEDdDL~~RL--~~Glk-i~R~~ 288 (406)
+........||..+++++-+.++ +|+ .||| +|.+|..|+ ..|++ |...+
T Consensus 249 ~~~l~~~~d~~sG~~a~rR~~l~~i-~f~---~gyg-~e~ell~~~~~~~G~~~I~eVp 302 (387)
T 3f1y_A 249 YPELAGFVQPLAGEFVADRELFCSI-PFL---TGYA-VETGIMIDVLKKVGLGAMAQVD 302 (387)
T ss_dssp CGGGTTCSCTTCSCEEEEHHHHTTS-CEE---CSTT-HHHHHHHHHHHHHCGGGEEEEE
T ss_pred hHhhccccccccccEEEEHHHHHhC-CCC---CCcc-hHHHHHHHHHHhcCCCeEEEEe
Confidence 00123345689999999999999 896 5777 567787777 56987 77755
No 15
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=98.38 E-value=6.9e-07 Score=86.16 Aligned_cols=144 Identities=16% Similarity=0.244 Sum_probs=93.6
Q ss_pred CCceEEEEEeecCchHHHHHHHHHHHHHHhhcc--cceeEEEEEEcc-------------------------ccccchhh
Q psy5933 131 PQHQVAIIVPYMNREGQLKTFLLHIHQFLQKQF--ISYQIFVIEQRH-------------------------PAEFNRGK 183 (406)
Q Consensus 131 ~~~kVAIIIPyRnR~~hL~~fL~~L~p~L~rQ~--l~y~I~VIeQ~d-------------------------~g~FNRak 183 (406)
...+|+||||.||+++.|..+|..+. +|. ..++|+||.... .....++.
T Consensus 46 ~~~~vSViIp~yN~~~~l~~~l~sl~----~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~~~~~~~~~~~~n~G~~~ 121 (329)
T 3ckj_A 46 AGRTISVVLPALDEEDTIGSVIDSIS----PLVDGLVDELIVLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRPGKGE 121 (329)
T ss_dssp TTCCEEEEEEESSCTTTHHHHHHHHG----GGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCCCCSHHH
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHH----HhhCCCCcEEEEEeCCCCchHHHHHHHhhhhhccceeeeccCCCCCCHHH
Confidence 34689999999999999999998873 342 358999986432 11234567
Q ss_pred hhhHHHHHHhhcCCccEEEEecCCCC-CCCCce--eeee-CCCcc-ee--E-----------------Eecccc-c----
Q psy5933 184 LLNIGYIEALKIKPFHCFIFHDVDLM-PTNPNN--IYAC-TKQPR-HM--S-----------------VAIDTF-N---- 234 (406)
Q Consensus 184 LLNvG~~eA~k~~~~Dc~IFhDVDLI-p~~d~n--lY~c-~~~Pr-Hl--S-----------------~~~dkf-~---- 234 (406)
++|.|+..| ..|+++|.|.|.+ +.++.. +... ...|. .+ . ....+. .
T Consensus 122 a~n~g~~~a----~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (329)
T 3ckj_A 122 ALWRSLAAS----RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVAR 197 (329)
T ss_dssp HHHHHHHHC----CCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHHTHH
T ss_pred HHHHHHHhC----CCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehhhHH
Confidence 889999877 5799999999998 777742 1100 00000 00 0 000000 0
Q ss_pred --cc------CCccccccceeeecHhhhhhcCCCCCCCccCCCCchhHHHHH-H-CCCe-EEec
Q psy5933 235 --YE------LPYCTIFGGAIAMLQHQFRQVNGFSNLYFGWGAEDDDLFQRL-S-NYYS-ICRF 287 (406)
Q Consensus 235 --yr------lpy~~~fGGv~a~~kedF~kVNGFdN~fwGWGGEDdDL~~RL-~-~Glk-i~R~ 287 (406)
+. .......||.++++++-|.+++ |++ ||| ||.||..|+ . .|+. +...
T Consensus 198 ~~~~~~~~~~~~~~~~~~g~~~~rr~~l~~i~-f~~---~~~-~D~~l~~r~~~~~g~~~i~~v 256 (329)
T 3ckj_A 198 PLLAALRPELGCILQPLGGEYAATRELLTSVP-FAP---GYG-VEIGLLVDTFDRLGLDAIAQV 256 (329)
T ss_dssp HHHHHHCGGGGGCSCTTCSCEEEEHHHHTTSC-BCC---GGG-HHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHHHhhhhhccccCCCccceeeeHHHHHhCC-CCC---CCc-ccHHHHHHHHHhcCCccEeee
Confidence 00 0123345788999999999995 876 455 999999999 5 7774 5544
No 16
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.02 E-value=0.00087 Score=66.66 Aligned_cols=79 Identities=10% Similarity=0.022 Sum_probs=50.7
Q ss_pred eEEEEEeecCchHHHHHHHHHHHHHHhhccccee----------------------EEEEEEccccccchhhhhhHHH--
Q psy5933 134 QVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQ----------------------IFVIEQRHPAEFNRGKLLNIGY-- 189 (406)
Q Consensus 134 kVAIIIPyRnR~~hL~~fL~~L~p~L~rQ~l~y~----------------------I~VIeQ~d~g~FNRakLLNvG~-- 189 (406)
.++|||+.+||.+ |+.+|..|...-. ..-+++ |.+++|.+.+ |......|.|+
T Consensus 3 ~~pViI~~yNRp~-l~~~L~sL~~~~p-~~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~-~~~~~~~N~g~~~ 79 (343)
T 1fo8_A 3 VIPILVIACDRST-VRRCLDKLLHYRP-SAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLS-NIAVQPDHRKFQG 79 (343)
T ss_dssp CCCEEEEESSCTT-HHHHHHHHHHHCS-CTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCC-CCCCCTTCGGGHH
T ss_pred cccEEEEECCcHH-HHHHHHHHHhcCC-CcCCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCcc-ccccchhhcCccc
Confidence 4789999999998 9999998853200 011233 4445566554 43333344332
Q ss_pred ------------HHHhhcCCccEEEEecCCCCCCCCce
Q psy5933 190 ------------IEALKIKPFHCFIFHDVDLMPTNPNN 215 (406)
Q Consensus 190 ------------~eA~k~~~~Dc~IFhDVDLIp~~d~n 215 (406)
..+.....+|++||.|.||+|.+||.
T Consensus 80 y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~ 117 (343)
T 1fo8_A 80 YYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFF 117 (343)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHH
T ss_pred chhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHH
Confidence 22222236899999999999999975
No 17
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=95.37 E-value=0.028 Score=56.74 Aligned_cols=148 Identities=13% Similarity=0.061 Sum_probs=86.4
Q ss_pred EEEEeecCchHHHHHHHHHHHHHHhhcccceeEEEEEEcc----------------------------c--c--ccchhh
Q psy5933 136 AIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRH----------------------------P--A--EFNRGK 183 (406)
Q Consensus 136 AIIIPyRnR~~hL~~fL~~L~p~L~rQ~l~y~I~VIeQ~d----------------------------~--g--~FNRak 183 (406)
-||||+++ +.+..++..+...+. ..+++|+||+... . + .+.+|.
T Consensus 3 lVIiP~~e--E~I~~vl~~l~~~~~--~~~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~ 78 (397)
T 2bo4_A 3 LVVFPFKH--EHPEVLLHNVRVAAA--HPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGD 78 (397)
T ss_dssp EEEEECCS--SCHHHHHHHHHHHHH--STTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHH
T ss_pred EEEEeCCc--cCHHHHHHHHHHhcc--CCCeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHH
Confidence 47888876 457777776643222 2357888886321 1 1 367888
Q ss_pred hhhHHHHHHhhcCCccEEEEecCCCCC-CCCce--e---------eeeCCCccee-EEec-ccc-------ccc----CC
Q psy5933 184 LLNIGYIEALKIKPFHCFIFHDVDLMP-TNPNN--I---------YACTKQPRHM-SVAI-DTF-------NYE----LP 238 (406)
Q Consensus 184 LLNvG~~eA~k~~~~Dc~IFhDVDLIp-~~d~n--l---------Y~c~~~PrHl-S~~~-dkf-------~yr----lp 238 (406)
+++.|+..|+...++|+++|.|.|+.. .++.. + ..++...++- .... ..+ .|. ..
T Consensus 79 Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~~~~~~~~~~ 158 (397)
T 2bo4_A 79 GMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSW 158 (397)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTSSGGG
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHHHHHHHhhccc
Confidence 999999666533578999999999952 22210 0 0111111110 0000 000 111 01
Q ss_pred ccccccceeeecHhhhhhcCCCC--CCCccCCCCchhHHHHH-HCCCeEEecc
Q psy5933 239 YCTIFGGAIAMLQHQFRQVNGFS--NLYFGWGAEDDDLFQRL-SNYYSICRFS 288 (406)
Q Consensus 239 y~~~fGGv~a~~kedF~kVNGFd--N~fwGWGGEDdDL~~RL-~~Glki~R~~ 288 (406)
.....+|-.+++++-+.++.+.. ..-.||| .|.++..++ ..|++|...+
T Consensus 159 i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg-~eiel~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 159 IEQPLGGELLMRREVAAMLYEDERVRRRSDWG-IDTLYTFVTVQQGVSIYECY 210 (397)
T ss_dssp CSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTT-HHHHHHHHHHHTTCCEEEEE
T ss_pred cccCCcccEEEeHHHHHHHhhhcccCcCCCcc-hHHHHHHHHHHcCCEEEEEE
Confidence 11223688899999998884321 1445776 589999999 9999998765
No 18
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=94.40 E-value=0.071 Score=54.17 Aligned_cols=27 Identities=22% Similarity=0.205 Sum_probs=19.9
Q ss_pred hhhhhhHHHHHHhhcCCccEEEEecCCC
Q psy5933 181 RGKLLNIGYIEALKIKPFHCFIFHDVDL 208 (406)
Q Consensus 181 RakLLNvG~~eA~k~~~~Dc~IFhDVDL 208 (406)
||.++=.|+..|.. ...|+++|||+|+
T Consensus 145 KG~Am~aGl~~A~~-~~gd~Vv~~DaDl 171 (394)
T 2zu9_A 145 KGEGMLVGLLLAKA-IGAEYVGFVDADN 171 (394)
T ss_dssp HHHHHHHHHHHHHH-TTCSEEEECCSCB
T ss_pred hHHHHHHHHHHHhh-CCCCEEEEEeCCC
Confidence 44456678877732 2579999999999
No 19
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=89.59 E-value=0.49 Score=48.02 Aligned_cols=29 Identities=14% Similarity=-0.040 Sum_probs=19.4
Q ss_pred hhhHHHHHHhhcCCccEEEEecCCCCCCCC
Q psy5933 184 LLNIGYIEALKIKPFHCFIFHDVDLMPTNP 213 (406)
Q Consensus 184 LLNvG~~eA~k~~~~Dc~IFhDVDLIp~~d 213 (406)
+|=.|+..|.- ...+|+-|.|.|.-...+
T Consensus 147 gmi~Gi~~Ak~-~~geYVgFvDADdyi~~~ 175 (391)
T 2wvl_A 147 GMILALVFAAL-SGRRYVGFIDADNYFPGA 175 (391)
T ss_dssp HHHHHHHHHHH-TTCSEEEECCSCBSCHHH
T ss_pred HHHHHHHHHHh-cCCCEEEEEcCcCCCccC
Confidence 34456666632 367999999999865333
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=79.11 E-value=2.6 Score=39.29 Aligned_cols=141 Identities=20% Similarity=0.203 Sum_probs=80.1
Q ss_pred eEEEEEeecCchHHHHHHHHHHHHHHhhcccceeEEEEEEccccccchhhhhhHHHHHHhhcCCccEEEEecCCCCC---
Q psy5933 134 QVAIIVPYMNREGQLKTFLLHIHQFLQKQFISYQIFVIEQRHPAEFNRGKLLNIGYIEALKIKPFHCFIFHDVDLMP--- 210 (406)
Q Consensus 134 kVAIIIPyRnR~~hL~~fL~~L~p~L~rQ~l~y~I~VIeQ~d~g~FNRakLLNvG~~eA~k~~~~Dc~IFhDVDLIp--- 210 (406)
+....||.++-.. -.|..++.+.++++.+... +.. =+.++|..+...+.+.++|+++|.|.|.+|
T Consensus 2 ~~~~~~~~~~~~~------l~l~~~l~~~gi~~~l~~~--~Sl----I~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~F 69 (203)
T 2c0n_A 2 RTLFFIPSMGSVR------LPLIDFLVKNDIEYVILSR--RNH----VAVQREIALDMFLEMKDYDTLAFLDEDVVPIEI 69 (203)
T ss_dssp CEEEEEECSSCCC------HHHHHHHHHTTCCEEEECC--CSC----HHHHHHHHHHHHHHCTTCCEEEEECTTEEEEEC
T ss_pred ceEEEeccCCcee------hHHHHHHHhCCCeEEEEcc--ccc----hHHHHHHHHHHHHhcCCCCEEEEEeCCCCcccc
Confidence 5678899987443 2344566777777776655 222 233566666666666789999999999433
Q ss_pred CCCce--------eeeeCCCcc----eeEEeccccccc---CCccccccceeeecHhhhhhc--CCC----CCCCccCCC
Q psy5933 211 TNPNN--------IYACTKQPR----HMSVAIDTFNYE---LPYCTIFGGAIAMLQHQFRQV--NGF----SNLYFGWGA 269 (406)
Q Consensus 211 ~~d~n--------lY~c~~~Pr----HlS~~~dkf~yr---lpy~~~fGGv~a~~kedF~kV--NGF----dN~fwGWGG 269 (406)
.++.. -..|+..|+ +.+.....+.-. .+-...-+|-++++++-|.++ -.| ++.-.-|=|
T Consensus 70 dPe~V~rLl~~g~DVV~GsYp~K~~~~~s~~a~~y~~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~g 149 (203)
T 2c0n_A 70 DFQKVEAKFNEGYDVVCGYYYLKTLRGYSVYRKDWEKEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIG 149 (203)
T ss_dssp CHHHHHHHHHHTCSEEEEECBCTTSSSBSEESSSBCSSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC---------CC
T ss_pred CHHHHHHHHhCCCCEEEEEeeccCCCccchHHHHHHHhccCceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccC
Confidence 33321 122333322 233222221100 112223349999999999887 344 112223778
Q ss_pred CchhHHHHH-HCCCeEEe
Q psy5933 270 EDDDLFQRL-SNYYSICR 286 (406)
Q Consensus 270 EDdDL~~RL-~~Glki~R 286 (406)
||..|..-+ .+|..+..
T Consensus 150 Edv~F~~~~k~~~~~~~~ 167 (203)
T 2c0n_A 150 EDVYFFSTHKPRTYALSS 167 (203)
T ss_dssp HHHHHHHHHCCCEEEEEE
T ss_pred CceEEEeccccccccccc
Confidence 999999988 77777654
No 21
>1gwm_A NCP1, non-catalytic protein 1; carbohydrate binding domain, glucomannan, cellohexaose, mannohexaose, cellulosome; HET: GLC BGC; 1.15A {Piromyces equi} SCOP: b.18.1.19 PDB: 1gwk_A* 1gwl_A* 1w90_A 1w8t_A* 1w8u_A* 1w8w_A 1w8z_A 1w9f_A 1oh3_A*
Probab=28.63 E-value=11 Score=32.80 Aligned_cols=75 Identities=15% Similarity=0.126 Sum_probs=38.8
Q ss_pred eccCcccccc-------cceEEeEEEEeceeeEEEeCC--CCcceeeEeccCcccceEEEEEEeeccccccccccccccc
Q psy5933 319 FKTDGLNTLQ-------NNYTVLAGEANGCVTQYKDNS--SIDSCSFDLQVPHSALQMINVVIDAAADHLDYRWRESHDI 389 (406)
Q Consensus 319 ~~~DGLnsl~-------~~Y~vl~~~~~~lyT~i~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
++..|+-.++ ++++|=+.....=||-+..++ ...+=.+++|--+.++-.|-|+-=+ +.=-.-.|-
T Consensus 67 ~K~EG~VKi~V~~~~~~E~F~V~s~~~S~~~~~Y~~~VD~~~~FDRI~~QD~P~~~~~I~~r~ii------~STGS~DDF 140 (153)
T 1gwm_A 67 MKNEGKVKILVENSEADEKFEVETISPSDEYVTYILDVDFDLPFDRIDFQDAPGNGDRIWIKNLV------HSTGSADDF 140 (153)
T ss_dssp EEESSCEEEEEEETTTTEEEEEEEECCEEEEEEEEEECCCSSCBCEEEEEETTCSCCCEEEEEEE------EESSCGGGC
T ss_pred EecCcEEEEEEecCCcccceeeeeeccccccEEEEEeccCcccccEEEEecCCCCCCeEEEEEEE------ecccchhcc
Confidence 3455665443 256666666566666654433 3345566666666666544443211 111123466
Q ss_pred CCCccccccc
Q psy5933 390 NEPESIVSHH 399 (406)
Q Consensus 390 ~~~~~~~~~~ 399 (406)
+.|-.+--||
T Consensus 141 ~~Pi~~~~~~ 150 (153)
T 1gwm_A 141 VDPINLEHHH 150 (153)
T ss_dssp CCCGGGSSCC
T ss_pred CCcccccccc
Confidence 7776665555
No 22
>1wcu_A CBM29_1, non-catalytic protein 1; carbohydrate binding, carbohydrate binding module; 1.5A {Piromyces equi}
Probab=26.49 E-value=13 Score=32.42 Aligned_cols=41 Identities=15% Similarity=0.004 Sum_probs=20.9
Q ss_pred ceEEeEEEEeceeeEEEeCCC--CcceeeEeccCcccceEEEE
Q psy5933 330 NYTVLAGEANGCVTQYKDNSS--IDSCSFDLQVPHSALQMINV 370 (406)
Q Consensus 330 ~Y~vl~~~~~~lyT~i~~~~~--~~~~~v~~~~~~~~~~~~~~ 370 (406)
+++|=+.....=||-...++. ..+=.+++|--+.++-.|-|
T Consensus 89 ~F~V~s~~~S~~~~~Y~~~VD~~~~FDRI~~QD~P~~~~~I~~ 131 (153)
T 1wcu_A 89 AFNVGSFRSSSDFTEYKFEVDDEYQFDRIIVQDGPASNIPIYM 131 (153)
T ss_dssp CEEEEEECCEEEEEEEEEEEEEEEEESEEEEEETTCCCCCEEE
T ss_pred ceeeeeeccccccEEEEEeccCcccccEEEEecCCCCCCeEEE
Confidence 677766666666666543322 22334455544555544433
Done!