BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5937
(201 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2AM29|AF9_MOUSE Protein AF-9 OS=Mus musculus GN=Mllt3 PE=1 SV=1
Length = 569
Score = 126 bits (317), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 83/110 (75%), Gaps = 3/110 (2%)
Query: 1 MAYSN-VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFP 59
MA S V++ LE+GH A VR K T EGFTHDW VFVRG ++++I +F++KVVFHLHE+FP
Sbjct: 1 MASSCAVQVKLELGHRAQVRKKPTVEGFTHDWMVFVRGPEHSNIQHFVEKVVFHLHESFP 60
Query: 60 KPKRILKEPPYVVKESGYAGFTLPIEVY-GDLIVPKSKRTTY-IFIKPEG 107
+PKR+ K+PPY V+ESGYAGF LPIEVY + PK R Y +F+ EG
Sbjct: 61 RPKRVCKDPPYKVEESGYAGFILPIEVYFKNKEEPKKVRFDYDLFLHLEG 110
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 65/74 (87%)
Query: 106 EGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPI 165
EGFTHDW VFVRG ++++I +F++KVVFHLHE+FP+PKR+ K+PPY V+ESGYAGF LPI
Sbjct: 26 EGFTHDWMVFVRGPEHSNIQHFVEKVVFHLHESFPRPKRVCKDPPYKVEESGYAGFILPI 85
Query: 166 EVYLKNNNEPRKIR 179
EVY KN EP+K+R
Sbjct: 86 EVYFKNKEEPKKVR 99
>sp|P42568|AF9_HUMAN Protein AF-9 OS=Homo sapiens GN=MLLT3 PE=1 SV=2
Length = 568
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
Query: 1 MAYSN-VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFP 59
MA S V++ LE+GH A VR K T EGFTHDW VFVRG ++++I +F++KVVFHLHE+FP
Sbjct: 1 MASSCAVQVKLELGHRAQVRKKPTVEGFTHDWMVFVRGPEHSNIQHFVEKVVFHLHESFP 60
Query: 60 KPKRILKEPPYVVKESGYAGFTLPIEVY 87
+PKR+ K+PPY V+ESGYAGF LPIEVY
Sbjct: 61 RPKRVCKDPPYKVEESGYAGFILPIEVY 88
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 65/74 (87%)
Query: 106 EGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPI 165
EGFTHDW VFVRG ++++I +F++KVVFHLHE+FP+PKR+ K+PPY V+ESGYAGF LPI
Sbjct: 26 EGFTHDWMVFVRGPEHSNIQHFVEKVVFHLHESFPRPKRVCKDPPYKVEESGYAGFILPI 85
Query: 166 EVYLKNNNEPRKIR 179
EVY KN EPRK+R
Sbjct: 86 EVYFKNKEEPRKVR 99
>sp|Q03111|ENL_HUMAN Protein ENL OS=Homo sapiens GN=MLLT1 PE=1 SV=2
Length = 559
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 67/82 (81%)
Query: 6 VKITLEIGHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRIL 65
V++ LE+GH A +R K T EGFTHDW VFVRG + DI +F++KVVF LH++FPKP+R+
Sbjct: 7 VQVRLELGHRAQLRKKPTTEGFTHDWMVFVRGPEQCDIQHFVEKVVFWLHDSFPKPRRVC 66
Query: 66 KEPPYVVKESGYAGFTLPIEVY 87
KEPPY V+ESGYAGF +PIEV+
Sbjct: 67 KEPPYKVEESGYAGFIMPIEVH 88
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 61/73 (83%)
Query: 106 EGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPI 165
EGFTHDW VFVRG + DI +F++KVVF LH++FPKP+R+ KEPPY V+ESGYAGF +PI
Sbjct: 26 EGFTHDWMVFVRGPEQCDIQHFVEKVVFWLHDSFPKPRRVCKEPPYKVEESGYAGFIMPI 85
Query: 166 EVYLKNNNEPRKI 178
EV+ KN EPRK+
Sbjct: 86 EVHFKNKEEPRKV 98
>sp|P53930|AF9_YEAST Protein AF-9 homolog OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YAF9 PE=1 SV=1
Length = 226
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%)
Query: 16 ASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKES 75
SV+ P TH W +FVRG N DI FI KVVF LH+T+P P R ++ PP+ + E+
Sbjct: 28 GSVKPPNAPAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTET 87
Query: 76 GYAGFTLPIEVY 87
G+ F + I+VY
Sbjct: 88 GWGEFDINIKVY 99
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 105 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLP 164
P TH W +FVRG N DI FI KVVF LH+T+P P R ++ PP+ + E+G+ F +
Sbjct: 36 PAEHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPNPVRSIEAPPFELTETGWGEFDIN 95
Query: 165 IEVYL 169
I+VY
Sbjct: 96 IKVYF 100
>sp|Q755P0|AF9_ASHGO Protein AF-9 homolog OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=YAF9 PE=3 SV=1
Length = 208
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 16 ASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKES 75
VR P TH W +FVRG DI FI KVVF LHET+P P R++ PP+ + E+
Sbjct: 28 GDVRPAIAPSEHTHMWTIFVRGPQGEDISYFIKKVVFKLHETYPNPVRVVDAPPFELTET 87
Query: 76 GYAGFTLPIEVY 87
G+ F + ++V+
Sbjct: 88 GWGEFEINVKVH 99
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 103 IKPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFT 162
I P TH W +FVRG DI FI KVVF LHET+P P R++ PP+ + E+G+ F
Sbjct: 34 IAPSEHTHMWTIFVRGPQGEDISYFIKKVVFKLHETYPNPVRVVDAPPFELTETGWGEFE 93
Query: 163 LPIEVYL 169
+ ++V+
Sbjct: 94 INVKVHF 100
>sp|Q6CIV8|AF9_KLULA Protein AF-9 homolog OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=YAF9 PE=3 SV=1
Length = 220
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 105 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLP 164
P+ TH W +FVR DI FI KVVF LHET+P P R+++ PP+ + E+G+ F +
Sbjct: 37 PKDHTHLWTIFVRDPRGEDISYFIKKVVFKLHETYPNPVRVIEAPPFELTETGWGEFEIN 96
Query: 165 IEVYLKN 171
I++Y +
Sbjct: 97 IKIYFAD 103
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 23 TPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTL 82
P+ TH W +FVR DI FI KVVF LHET+P P R+++ PP+ + E+G+ F +
Sbjct: 36 APKDHTHLWTIFVRDPRGEDISYFIKKVVFKLHETYPNPVRVIEAPPFELTETGWGEFEI 95
Query: 83 PIEVY 87
I++Y
Sbjct: 96 NIKIY 100
>sp|Q6FXM4|AF9_CANGA Protein AF-9 homolog OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=YAF9 PE=3
SV=1
Length = 221
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 105 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLP 164
P TH W +FVR DI FI KVVF LHET+P P R ++ PP+ + E+G+ F +
Sbjct: 36 PSEHTHLWTIFVRSPTGDDISYFIKKVVFKLHETYPNPVRTIEAPPFELTETGWGEFDIN 95
Query: 165 IEVYL 169
I++Y
Sbjct: 96 IKIYF 100
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%)
Query: 19 RNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYA 78
R P TH W +FVR DI FI KVVF LHET+P P R ++ PP+ + E+G+
Sbjct: 31 RPPNAPSEHTHLWTIFVRSPTGDDISYFIKKVVFKLHETYPNPVRTIEAPPFELTETGWG 90
Query: 79 GFTLPIEVY 87
F + I++Y
Sbjct: 91 EFDINIKIY 99
>sp|Q10319|AF9_SCHPO Protein AF-9 homolog OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=yaf9 PE=3 SV=1
Length = 217
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 21 KRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGF 80
++ P TH W +FV GVD DI ++ KVVF LH+T+ P R ++ PP+ V E+G+ F
Sbjct: 31 EKAPTDHTHTWRIFVEGVDGEDISKWVRKVVFKLHDTYNNPTRTIESPPFEVIETGWGEF 90
Query: 81 TLPIEVY 87
+ + ++
Sbjct: 91 DIMVRIF 97
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 105 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLP 164
P TH W +FV GVD DI ++ KVVF LH+T+ P R ++ PP+ V E+G+ F +
Sbjct: 34 PTDHTHTWRIFVEGVDGEDISKWVRKVVFKLHDTYNNPTRTIESPPFEVIETGWGEFDIM 93
Query: 165 IEVYL 169
+ ++
Sbjct: 94 VRIFF 98
>sp|Q4WPM8|AF9_ASPFU Protein AF-9 homolog OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=yaf9 PE=3 SV=2
Length = 252
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 24 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLP 83
P TH W VFV+GV++ DI ++ KV F LHET+ + R +++PP+ V E+G+ F +
Sbjct: 38 PADHTHQWRVFVKGVNDEDISYWLKKVQFKLHETYAQNVRTIEQPPFEVTETGWGEFEIQ 97
Query: 84 IEVYGDLIVPKS 95
I++Y VP+S
Sbjct: 98 IKLY---FVPES 106
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 105 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLP 164
P TH W VFV+GV++ DI ++ KV F LHET+ + R +++PP+ V E+G+ F +
Sbjct: 38 PADHTHQWRVFVKGVNDEDISYWLKKVQFKLHETYAQNVRTIEQPPFEVTETGWGEFEIQ 97
Query: 165 IEVYL 169
I++Y
Sbjct: 98 IKLYF 102
>sp|Q5BC71|AF9_EMENI Protein AF-9 homolog OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=yaf9 PE=3 SV=1
Length = 275
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 28 THDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVY 87
TH W V+VRGV+ DI +I KV F LHET+ + R ++ PPY V E+G+ F + I++Y
Sbjct: 42 THQWRVYVRGVNGEDISYWIKKVQFKLHETYVQNVRTVEHPPYEVTETGWGEFEIQIKIY 101
Query: 88 GDLIVPKS 95
VP+S
Sbjct: 102 ---FVPES 106
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 109 THDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVY 168
TH W V+VRGV+ DI +I KV F LHET+ + R ++ PPY V E+G+ F + I++Y
Sbjct: 42 THQWRVYVRGVNGEDISYWIKKVQFKLHETYVQNVRTVEHPPYEVTETGWGEFEIQIKIY 101
Query: 169 L 169
Sbjct: 102 F 102
>sp|Q4I7S1|AF9_GIBZE Protein AF-9 homolog OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=YAF9 PE=3 SV=1
Length = 268
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 105 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILK-EP--PYVVKESGYAGF 161
P+ TH W+VFV+G+D+ DI ++ +V F LHE+ P R+++ EP P+ V+E+G+ F
Sbjct: 40 PDNHTHSWQVFVKGLDDTDITYWLRRVQFKLHESIPNYVRMVEGEPGKPFTVEETGWGEF 99
Query: 162 TLPIEVYLKNNN 173
+ I++Y N++
Sbjct: 100 DITIKLYYVNDS 111
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 24 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILK-EP--PYVVKESGYAGF 80
P+ TH W+VFV+G+D+ DI ++ +V F LHE+ P R+++ EP P+ V+E+G+ F
Sbjct: 40 PDNHTHSWQVFVKGLDDTDITYWLRRVQFKLHESIPNYVRMVEGEPGKPFTVEETGWGEF 99
Query: 81 TLPIEVY 87
+ I++Y
Sbjct: 100 DITIKLY 106
>sp|Q9CR11|YETS4_MOUSE YEATS domain-containing protein 4 OS=Mus musculus GN=Yeats4 PE=2
SV=1
Length = 227
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 21 KRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYA 78
KR +G TH W V+V+ N D+ ++ K+ F LHE++ P R++ +PPY + E+G+
Sbjct: 37 KREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWG 94
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 106 EGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYA 159
+G TH W V+V+ N D+ ++ K+ F LHE++ P R++ +PPY + E+G+
Sbjct: 41 DGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWG 94
>sp|O95619|YETS4_HUMAN YEATS domain-containing protein 4 OS=Homo sapiens GN=YEATS4 PE=1
SV=1
Length = 227
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 21 KRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYA 78
KR +G TH W V+V+ N D+ ++ K+ F LHE++ P R++ +PPY + E+G+
Sbjct: 37 KREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWG 94
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 106 EGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYA 159
+G TH W V+V+ N D+ ++ K+ F LHE++ P R++ +PPY + E+G+
Sbjct: 41 DGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWG 94
>sp|Q59LC9|AF9_CANAL Protein AF-9 homolog OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=YAF9 PE=3 SV=1
Length = 254
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 19 RNKRTPEGFTHDWEVFVRGV-DNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGY 77
R TP TH+W VF + V + D+ I KV F LHET+ P R L+ PPY V E+G+
Sbjct: 32 RKPTTPPEHTHEWTVFFKPVLGDIDLTPLIKKVTFKLHETYENPVRTLESPPYQVTETGW 91
Query: 78 AGFTLPIEVY 87
F + I+++
Sbjct: 92 GEFEIIIKLH 101
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 9/98 (9%)
Query: 77 YAGFTLPIEVYGD---LIVPKSKRTTYIFIKPEGFTHDWEVFVRGV-DNADIHNFIDKVV 132
+ ++PI +YG+ + P+ ++ T P TH+W VF + V + D+ I KV
Sbjct: 11 FVSISVPI-LYGNHAIKLTPEKRKPT----TPPEHTHEWTVFFKPVLGDIDLTPLIKKVT 65
Query: 133 FHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLK 170
F LHET+ P R L+ PPY V E+G+ F + I+++ +
Sbjct: 66 FKLHETYENPVRTLESPPYQVTETGWGEFEIIIKLHFQ 103
>sp|P0CM08|AF9_CRYNJ Protein AF-9 homolog OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=YAF9 PE=3
SV=1
Length = 392
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 30/110 (27%)
Query: 23 TPEGFTHDWEVFVRGVDNA---------------------DIHNFIDKVVFHLHETFPKP 61
P G TH W VF+ + D+ FI KV F LHET+ P
Sbjct: 32 APAGHTHKWTVFLNSAASPPLKQGEPPDYEDIDYLPGGADDLSYFIRKVTFKLHETYATP 91
Query: 62 KRILKEPPYVVKESGYAGFTLPIEVYGDLIVPKSKRTTYIFIKPEGFTHD 111
R++ +PPY V E+G+ FT+ I + ++P+S KP G H+
Sbjct: 92 NRVIDKPPYRVSETGWGEFTVQIRIQ---LIPESSE------KPLGLQHN 132
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 21/101 (20%)
Query: 103 IKPEGFTHDWEVFVRGVDNA---------------------DIHNFIDKVVFHLHETFPK 141
+ P G TH W VF+ + D+ FI KV F LHET+
Sbjct: 31 LAPAGHTHKWTVFLNSAASPPLKQGEPPDYEDIDYLPGGADDLSYFIRKVTFKLHETYAT 90
Query: 142 PKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKIRRKH 182
P R++ +PPY V E+G+ FT+ I + L + + + +H
Sbjct: 91 PNRVIDKPPYRVSETGWGEFTVQIRIQLIPESSEKPLGLQH 131
>sp|P0CM09|AF9_CRYNB Protein AF-9 homolog OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=YAF9 PE=3 SV=1
Length = 392
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 30/110 (27%)
Query: 23 TPEGFTHDWEVFVRGVDNA---------------------DIHNFIDKVVFHLHETFPKP 61
P G TH W VF+ + D+ FI KV F LHET+ P
Sbjct: 32 APAGHTHKWTVFLNSAASPPLKQGEPPDYEDIDYLPGGADDLSYFIRKVTFKLHETYATP 91
Query: 62 KRILKEPPYVVKESGYAGFTLPIEVYGDLIVPKSKRTTYIFIKPEGFTHD 111
R++ +PPY V E+G+ FT+ I + ++P+S KP G H+
Sbjct: 92 NRVIDKPPYRVSETGWGEFTVQIRIQ---LIPESSE------KPLGLQHN 132
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 21/101 (20%)
Query: 103 IKPEGFTHDWEVFVRGVDNA---------------------DIHNFIDKVVFHLHETFPK 141
+ P G TH W VF+ + D+ FI KV F LHET+
Sbjct: 31 LAPAGHTHKWTVFLNSAASPPLKQGEPPDYEDIDYLPGGADDLSYFIRKVTFKLHETYAT 90
Query: 142 PKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKIRRKH 182
P R++ +PPY V E+G+ FT+ I + L + + + +H
Sbjct: 91 PNRVIDKPPYRVSETGWGEFTVQIRIQLIPESSEKPLGLQH 131
>sp|Q7RZK7|AF9_NEUCR Protein AF-9 homolog OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=yaf-9
PE=3 SV=1
Length = 309
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 10/90 (11%)
Query: 86 VYGDLIVPKSKRTTYIFIKPEGF----THDWEVFVRGVDNADIHNFIDKVVFHLHETFPK 141
VYG P ++T KP G TH W VF++G+D+ DI ++ +V F LHE+ P
Sbjct: 19 VYGTTARPFDEKTN---PKPPGIPDDHTHSWTVFIKGIDDVDITYWLRRVQFKLHESIPN 75
Query: 142 PKRI---LKEPPYVVKESGYAGFTLPIEVY 168
R+ +K P+ + E+G+ F + +++Y
Sbjct: 76 HVRMVEGVKGQPFQIHETGWGEFEITMKLY 105
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 24 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRI---LKEPPYVVKESGYAGF 80
P+ TH W VF++G+D+ DI ++ +V F LHE+ P R+ +K P+ + E+G+ F
Sbjct: 39 PDDHTHSWTVFIKGIDDVDITYWLRRVQFKLHESIPNHVRMVEGVKGQPFQIHETGWGEF 98
Query: 81 TLPIEVY 87
+ +++Y
Sbjct: 99 EITMKLY 105
>sp|P35189|TAF14_YEAST Transcription initiation factor TFIID subunit 14 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF14 PE=1
SV=1
Length = 244
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 129 DKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNNNEPRKI 178
DKV++HLH TF P R +PP+ ++E G+ GF L I V+L RKI
Sbjct: 52 DKVIYHLHPTFANPNRTFTDPPFRIEEQGWGGFPLDISVFLLEKAGERKI 101
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 48 DKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVY 87
DKV++HLH TF P R +PP+ ++E G+ GF L I V+
Sbjct: 52 DKVIYHLHPTFANPNRTFTDPPFRIEEQGWGGFPLDISVF 91
>sp|Q99314|SAS5_YEAST Something about silencing protein 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SAS5 PE=1 SV=1
Length = 248
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 128 IDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYLKNN 172
+ K ++HLH +F +PKR L P+ +KE+G+ F L IE + N
Sbjct: 52 LSKCIYHLHSSFKQPKRRLNSLPFFIKETGWGEFNLKIECFFIGN 96
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 47 IDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVY 87
+ K ++HLH +F +PKR L P+ +KE+G+ F L IE +
Sbjct: 52 LSKCIYHLHSSFKQPKRRLNSLPFFIKETGWGEFNLKIECF 92
>sp|O94436|TAF14_SCHPO Transcription initiation factor TFIID subunit 14
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tfg3 PE=1 SV=1
Length = 241
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 45 NFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVY 87
+F+D+V + LH TF P R +++PP+ +KE G+ F + I +Y
Sbjct: 52 SFVDRVTYKLHPTFQNPTRTIRKPPFQIKEQGWGEFEMEIIIY 94
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 126 NFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVY 168
+F+D+V + LH TF P R +++PP+ +KE G+ F + I +Y
Sbjct: 52 SFVDRVTYKLHPTFQNPTRTIRKPPFQIKEQGWGEFEMEIIIY 94
>sp|Q3TUF7|YETS2_MOUSE YEATS domain-containing protein 2 OS=Mus musculus GN=Yeats2 PE=2
SV=2
Length = 1407
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 109 THDWEVFVRGV-DNADIHNFIDKVVFHLHETFPKPKRI--LKEPPYVVKESGYAGFTLPI 165
TH W V+VRG I++F+ KV F LH ++ KP + ++EPP+ + G+ F + +
Sbjct: 232 THKWMVYVRGSRREPSINHFVKKVWFFLHPSY-KPNDLVEVREPPFHLTRRGWGEFPVRV 290
Query: 166 EVYLKNNNEPR 176
+V+ K++ R
Sbjct: 291 QVHFKDSQNKR 301
Score = 41.6 bits (96), Expect = 0.004, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 28 THDWEVFVRGV-DNADIHNFIDKVVFHLHETFPKPKRI--LKEPPYVVKESGYAGFTLPI 84
TH W V+VRG I++F+ KV F LH ++ KP + ++EPP+ + G+ F + +
Sbjct: 232 THKWMVYVRGSRREPSINHFVKKVWFFLHPSY-KPNDLVEVREPPFHLTRRGWGEFPVRV 290
Query: 85 EVY 87
+V+
Sbjct: 291 QVH 293
>sp|Q9ULM3|YETS2_HUMAN YEATS domain-containing protein 2 OS=Homo sapiens GN=YEATS2 PE=1
SV=2
Length = 1422
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 109 THDWEVFVRGV-DNADIHNFIDKVVFHLHETFPKPKRI--LKEPPYVVKESGYAGFTLPI 165
TH W V+VRG I++F+ KV F LH ++ KP + ++EPP+ + G+ F + +
Sbjct: 231 THKWMVYVRGSRREPSINHFVKKVWFFLHPSY-KPNDLVEVREPPFHLTRRGWGEFPVRV 289
Query: 166 EVYLKNNNEPR 176
+V+ K++ R
Sbjct: 290 QVHFKDSQNKR 300
Score = 41.6 bits (96), Expect = 0.004, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 28 THDWEVFVRGV-DNADIHNFIDKVVFHLHETFPKPKRI--LKEPPYVVKESGYAGFTLPI 84
TH W V+VRG I++F+ KV F LH ++ KP + ++EPP+ + G+ F + +
Sbjct: 231 THKWMVYVRGSRREPSINHFVKKVWFFLHPSY-KPNDLVEVREPPFHLTRRGWGEFPVRV 289
Query: 85 EVY 87
+V+
Sbjct: 290 QVH 292
>sp|Q6CF24|AF9_YARLI Protein AF-9 homolog OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=YAF9 PE=3 SV=1
Length = 202
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 127 FIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYL 169
FI KVVF LH+T+ R ++EPP+ V E+G+ F + I ++
Sbjct: 25 FIKKVVFKLHDTYANSTRTIEEPPFEVTETGWGEFEISIRIFF 67
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 46 FIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVY 87
FI KVVF LH+T+ R ++EPP+ V E+G+ F + I ++
Sbjct: 25 FIKKVVFKLHDTYANSTRTIEEPPFEVTETGWGEFEISIRIF 66
>sp|Q4PFI5|AF9_USTMA Protein AF-9 homolog OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=YAF9 PE=3 SV=1
Length = 431
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 110 HDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYL 169
HD+ V D DI +FI +V F LHET+ +P R + + P+ + E+G+ F + I+++
Sbjct: 107 HDYHKMVGNKD--DISHFIKRVQFKLHETYSQPTRNVDKFPFHITETGWGEFEIQIKIFF 164
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 29 HDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVY 87
HD+ V D DI +FI +V F LHET+ +P R + + P+ + E+G+ F + I+++
Sbjct: 107 HDYHKMVGNKD--DISHFIKRVQFKLHETYSQPTRNVDKFPFHITETGWGEFEIQIKIF 163
>sp|Q2TAV2|TM248_XENLA Transmembrane protein 248 OS=Xenopus laevis GN=tmem248 PE=2 SV=1
Length = 315
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 15/128 (11%)
Query: 50 VVFHLHETFPKPKRILKEPPYVVKESGYAGFTLPIEVYGDLIVPKSKRTTYIFIKPEGFT 109
++ +LH I PP V+ +G + G K IK G T
Sbjct: 1 MILNLHPLENLKSYISSRPPLVIFMVSVSGMAIAFLTLGYFFKMKE-------IKSPGMT 53
Query: 110 HDWEVFVRGVDNADIHNFIDKVVFH-LHETFP-------KPKRILKEPPYVVKESGYAGF 161
DW +F+ +N D+ ++ + H L+ET P R + P +++SG
Sbjct: 54 EDWNIFLLRFNNLDLCVSENETLKHFLNETTPPESTVTSGQARSSTQTPQALEDSGPINI 113
Query: 162 TLPIEVYL 169
++ I + L
Sbjct: 114 SVAITLTL 121
>sp|O67566|RS8_AQUAE 30S ribosomal protein S8 OS=Aquifex aeolicus (strain VF5) GN=rpsH
PE=1 SV=1
Length = 168
Score = 31.2 bits (69), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 90 LIVPKSKRTTYIF--IKPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKP--KRI 145
L VP SK I +K EGF DWE + + K + L E P P KR
Sbjct: 25 LYVPSSKLKERILDVLKKEGFIQDWEAL-----KGEKYEEEYKKMKELAEKSPNPKMKRY 79
Query: 146 LKEPPYVVKESGYAGFTLPIEVYLK 170
LK+ E G PI++YLK
Sbjct: 80 LKQL-----EEYNKGTQYPIKIYLK 99
>sp|P31179|NADA_CYAPA Quinolinate synthase A OS=Cyanophora paradoxa GN=nadA PE=3 SV=1
Length = 329
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 46 FIDKVVFHLHETFPKPKRIL--KEPPYVVKESGYAGFTLPIEVYGDLIVPKSKRTTYIFI 103
F +K +F +P + I + P ++K + Y G T + Y V SK+TT+I I
Sbjct: 198 FSEKKIFEFQSLYPTAEVIAHPECEPTILKHANYIGSTTSLLQY----VKNSKKTTFIVI 253
Query: 104 KPEGFTHDWE 113
G H +
Sbjct: 254 TEPGIIHQMK 263
>sp|Q67VU7|BGA10_ORYSJ Putative beta-galactosidase 10 OS=Oryza sativa subsp. japonica
GN=Os06g0628500 PE=3 SV=1
Length = 809
Score = 30.8 bits (68), Expect = 7.1, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 24 PEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPKPKRILKEPPYVVKESGYAGFTLP 83
P+ +T +W + + D D H + + F + F K + PY+ Y P
Sbjct: 254 PKIWTENWTGWFKAWDKPDFHRSAEDIAFAVAMFFQK-----RGGPYITTSYDYDA---P 305
Query: 84 IEVYGDLIVPK 94
++ YG+L PK
Sbjct: 306 LDEYGNLRQPK 316
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,800,120
Number of Sequences: 539616
Number of extensions: 4023153
Number of successful extensions: 7511
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 7451
Number of HSP's gapped (non-prelim): 67
length of query: 201
length of database: 191,569,459
effective HSP length: 112
effective length of query: 89
effective length of database: 131,132,467
effective search space: 11670789563
effective search space used: 11670789563
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)