Query psy5937
Match_columns 201
No_of_seqs 192 out of 527
Neff 5.9
Searched_HMMs 13730
Date Fri Aug 16 22:19:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5937.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/5937hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2uyza1 d.20.1.1 (A:3-158) Ubi 44.0 34 0.0025 24.3 6.9 58 13-70 21-80 (156)
2 d2e2ca_ d.20.1.1 (A:) Ubiquiti 43.9 21 0.0015 25.6 5.6 46 26-71 36-83 (156)
3 d1fzya_ d.20.1.1 (A:) Ubiquiti 42.2 32 0.0023 24.1 6.4 47 25-71 28-76 (149)
4 d1jatb_ d.20.1.1 (B:) Ubiquiti 39.5 41 0.003 23.5 6.6 44 26-69 35-80 (136)
5 d1lb6a_ b.8.1.1 (A:) TNF recep 37.3 55 0.004 22.0 8.5 39 63-104 27-68 (155)
6 d1e43a1 b.71.1.1 (A:394-483) B 36.9 5.2 0.00038 27.1 1.0 14 69-82 66-79 (90)
7 d1ayza_ d.20.1.1 (A:) Ubiquiti 36.5 34 0.0025 23.9 5.7 46 26-71 30-77 (153)
8 d2d3na1 b.71.1.1 (A:399-485) B 35.7 5.7 0.00041 26.8 1.0 12 71-82 65-76 (87)
9 d1ud2a1 b.71.1.1 (A:391-480) B 33.4 6.5 0.00047 26.6 1.0 12 71-82 68-79 (90)
10 d1yrva1 d.20.1.1 (A:1-148) Ubi 31.4 54 0.0039 23.0 6.2 45 26-70 31-77 (148)
11 d2f4za1 d.20.1.1 (A:32-192) Hy 31.4 55 0.004 23.3 6.2 45 26-70 41-87 (161)
12 d1pzva_ d.20.1.1 (A:) Ubiquiti 30.1 46 0.0034 23.5 5.6 45 27-71 29-75 (161)
13 d2bepa1 d.20.1.1 (A:1-154) Ubi 29.5 64 0.0047 22.5 6.3 47 25-71 33-81 (154)
14 d2ucza_ d.20.1.1 (A:) Ubiquiti 26.9 63 0.0046 22.7 5.9 46 26-71 31-78 (164)
15 d1l0aa1 b.8.1.1 (A:350-504) TN 26.4 39 0.0028 23.0 4.5 39 63-104 25-65 (155)
16 d1zdna1 d.20.1.1 (A:6-156) Ubi 26.3 72 0.0053 22.2 6.1 46 26-71 33-80 (151)
17 d2a4da1 d.20.1.1 (A:82-220) Ub 26.2 95 0.0069 21.4 7.7 42 26-67 36-79 (139)
18 d2z5da1 d.20.1.1 (A:23-174) Ub 25.7 65 0.0047 22.4 5.7 43 28-70 28-72 (152)
19 d2awfa1 d.20.1.1 (A:7-131) Ubi 25.7 86 0.0062 21.0 6.2 44 27-70 28-73 (125)
20 d1i7ka_ d.20.1.1 (A:) Ubiquiti 25.1 87 0.0063 21.6 6.3 46 26-71 28-75 (146)
21 d1z3da1 d.20.1.1 (A:2-150) Ubi 23.7 94 0.0068 21.4 6.2 47 26-72 30-78 (149)
22 d1yh2a1 d.20.1.1 (A:1-154) Ubi 23.7 85 0.0062 21.6 6.0 46 26-71 29-76 (154)
23 d1j7db_ d.20.1.1 (B:) Ubiquiti 22.9 94 0.0069 21.4 6.1 49 26-74 29-79 (149)
24 d1y8xa1 d.20.1.1 (A:27-183) Ub 22.7 60 0.0044 22.9 5.0 53 26-79 29-83 (157)
25 d1yf9a1 d.20.1.1 (A:13-170) Ub 22.3 79 0.0058 22.3 5.6 46 26-71 23-70 (158)
26 d1czya1 b.8.1.1 (A:350-501) TN 20.4 67 0.0049 21.7 4.7 39 63-104 25-65 (152)
No 1
>d2uyza1 d.20.1.1 (A:3-158) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]}
Probab=44.01 E-value=34 Score=24.28 Aligned_cols=58 Identities=17% Similarity=0.300 Sum_probs=37.2
Q ss_pred ceeEEecCCCCCCCCeeeEEEEEEcCCCCCcccceeeEEEEECCCCCC--CeEEeeCCCE
Q psy5937 13 GHEASVRNKRTPEGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPK--PKRILKEPPY 70 (201)
Q Consensus 13 G~~~~~~~~~~~~~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~--p~r~v~~pPF 70 (201)
|-.+...+.+.++.+-.+|.+.+.|+.|..-..=+=++.+.+.++|+. |+..+..+.|
T Consensus 21 g~~~~p~~~~~~~~n~~~W~~~i~gp~gtpY~gg~f~~~i~fp~~YP~~pP~v~f~t~i~ 80 (156)
T d2uyza1 21 GFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLF 80 (156)
T ss_dssp TCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred CeEEEecCCCCCCCcccEEEEEEEcCCCCCccCCEEEEEEeCCccccCCCceeeeccccc
Confidence 334444433333345699999999998765443333788888888854 7777666655
No 2
>d2e2ca_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Clam (Spisula solidissima), E-2C [TaxId: 6584]}
Probab=43.86 E-value=21 Score=25.55 Aligned_cols=46 Identities=13% Similarity=0.304 Sum_probs=35.1
Q ss_pred CCeeeEEEEEEcCCCCCcccceeeEEEEECCCCC--CCeEEeeCCCEE
Q psy5937 26 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFP--KPKRILKEPPYV 71 (201)
Q Consensus 26 ~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~--~p~r~v~~pPF~ 71 (201)
+..+.|.+.+.|+.|..-..-+=++.+.+-+.|+ .|...+..+.|.
T Consensus 36 ~dl~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 83 (156)
T d2e2ca_ 36 DNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWH 83 (156)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred CcccEEEEEEEcCCccccCCCEEEEEEEecCCCCCCCceeeccccCcC
Confidence 3458999999999886666545578888989884 477777777665
No 3
>d1fzya_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]}
Probab=42.15 E-value=32 Score=24.06 Aligned_cols=47 Identities=17% Similarity=0.088 Sum_probs=34.2
Q ss_pred CCCeeeEEEEEEcCCCCCcccceeeEEEEECCCCCC--CeEEeeCCCEE
Q psy5937 25 EGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPK--PKRILKEPPYV 71 (201)
Q Consensus 25 ~~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~--p~r~v~~pPF~ 71 (201)
++.-++|.+.+.|+.|..-..-+=++.+.+.+.|+. |...+..+.|.
T Consensus 28 ~~~~~~w~~~I~gp~~t~y~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 76 (149)
T d1fzya_ 28 ESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYH 76 (149)
T ss_dssp SSCSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred CCchhEEEEEEEcCCCCCCCCCceeEEEEecCCcccCCcEEEecCCCcC
Confidence 345689999999988765555566899999999954 66666555543
No 4
>d1jatb_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]}
Probab=39.52 E-value=41 Score=23.47 Aligned_cols=44 Identities=16% Similarity=0.227 Sum_probs=31.7
Q ss_pred CCeeeEEEEEEcCCCCCcccceeeEEEEECCCCCC--CeEEeeCCC
Q psy5937 26 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPK--PKRILKEPP 69 (201)
Q Consensus 26 ~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~--p~r~v~~pP 69 (201)
..-++|.+.+.|+.+..-..-+=++.+.+-++|+. |...+..+.
T Consensus 35 ~~l~~W~~~i~Gp~~tpy~gg~f~~~i~fp~~YP~~PP~v~f~t~i 80 (136)
T d1jatb_ 35 ITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKI 80 (136)
T ss_dssp TTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCC
T ss_pred CceeEEEEEEECCCCChhhcCEEEEEEEecCCCCCCCCEEEEeccc
Confidence 34699999999988765554444788889998854 666665543
No 5
>d1lb6a_ b.8.1.1 (A:) TNF receptor associated factor 6 (TRAF6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.32 E-value=55 Score=22.04 Aligned_cols=39 Identities=10% Similarity=0.281 Sum_probs=25.9
Q ss_pred EEeeCCCEEEeeceeeeeEcEEEEEEccCC-CCC--ceeEEEeec
Q psy5937 63 RILKEPPYVVKESGYAGFTLPIEVYGDLIV-PKS--KRTTYIFIK 104 (201)
Q Consensus 63 r~v~~pPF~v~e~GwGeF~i~i~i~f~~~~-~k~--~r~i~h~L~ 104 (201)
..+..|+|.+.+.| +...|.+|..... ++. -..+|+.+.
T Consensus 27 ~~i~Sp~F~~g~~G---y~wrl~~yp~g~~~~~~~~~lsvyL~l~ 68 (155)
T d1lb6a_ 27 VVIHSPGFYTGKPG---YKLCMRLHLQLPTAQRCANYISLFVHTM 68 (155)
T ss_dssp EEEECCCEESSSSC---CEEEEEEEECCTTCTTTTTEEEEEEEEE
T ss_pred cEEECcCEEeCCCC---cEEEEEEEeCCCCCCCCCCEEEEEEEEe
Confidence 46789999877766 4889999995432 222 255665554
No 6
>d1e43a1 b.71.1.1 (A:394-483) Bacterial alpha-Amylase {Bacillus licheniformis [TaxId: 1402]}
Probab=36.94 E-value=5.2 Score=27.12 Aligned_cols=14 Identities=29% Similarity=0.788 Sum_probs=11.4
Q ss_pred CEEEeeceeeeeEc
Q psy5937 69 PYVVKESGYAGFTL 82 (201)
Q Consensus 69 PF~v~e~GwGeF~i 82 (201)
+=.|.+.|||+|.+
T Consensus 66 ~V~id~~G~g~F~v 79 (90)
T d1e43a1 66 PVVINSEGWGEFHV 79 (90)
T ss_dssp CEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 34677999999987
No 7
>d1ayza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc2 (RAD6) [TaxId: 4932]}
Probab=36.48 E-value=34 Score=23.85 Aligned_cols=46 Identities=9% Similarity=0.229 Sum_probs=35.0
Q ss_pred CCeeeEEEEEEcCCCCCcccceeeEEEEECCCC--CCCeEEeeCCCEE
Q psy5937 26 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETF--PKPKRILKEPPYV 71 (201)
Q Consensus 26 ~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf--~~p~r~v~~pPF~ 71 (201)
+.-..|.+.+.|+.|..-..-+=++.+.+-++| ..|...+..+.|.
T Consensus 30 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~H 77 (153)
T d1ayza_ 30 DNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFH 77 (153)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CcHHhHhheeeCCCCCccCCCEEEEEEecCccccCCCCeeeeccCCCc
Confidence 456899999999887665544448888889987 5588888777776
No 8
>d2d3na1 b.71.1.1 (A:399-485) Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 1416]}
Probab=35.66 E-value=5.7 Score=26.78 Aligned_cols=12 Identities=17% Similarity=0.731 Sum_probs=10.4
Q ss_pred EEeeceeeeeEc
Q psy5937 71 VVKESGYAGFTL 82 (201)
Q Consensus 71 ~v~e~GwGeF~i 82 (201)
.|.+.|||+|.+
T Consensus 65 ~id~~G~g~F~v 76 (87)
T d2d3na1 65 TINADGWGNFSV 76 (87)
T ss_dssp ECCTTSEEEEEE
T ss_pred EECCCceEEEEE
Confidence 567999999987
No 9
>d1ud2a1 b.71.1.1 (A:391-480) Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}
Probab=33.40 E-value=6.5 Score=26.64 Aligned_cols=12 Identities=17% Similarity=0.487 Sum_probs=10.4
Q ss_pred EEeeceeeeeEc
Q psy5937 71 VVKESGYAGFTL 82 (201)
Q Consensus 71 ~v~e~GwGeF~i 82 (201)
.|.+.|||+|.+
T Consensus 68 ~id~~G~g~F~V 79 (90)
T d1ud2a1 68 TINGDGWGEFFT 79 (90)
T ss_dssp ECCTTSEEEEEE
T ss_pred EECCCceEEEEE
Confidence 567999999987
No 10
>d1yrva1 d.20.1.1 (A:1-148) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 U [TaxId: 9606]}
Probab=31.42 E-value=54 Score=22.96 Aligned_cols=45 Identities=18% Similarity=0.400 Sum_probs=31.7
Q ss_pred CCeeeEEEEEEcCCCCCcccceeeEEEEECCCCCC--CeEEeeCCCE
Q psy5937 26 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPK--PKRILKEPPY 70 (201)
Q Consensus 26 ~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~--p~r~v~~pPF 70 (201)
+..+.|.+.+.|+.|.....-+=++.+.+-++|+. |...+..+.|
T Consensus 31 ~n~~~W~~~i~Gp~~t~yegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 77 (148)
T d1yrva1 31 EDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPF 77 (148)
T ss_dssp TTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCC
T ss_pred CcccEEEEEEEeCCCCccCCCceEEEEEeccccccCCceeeeccccc
Confidence 45689999999987766554344888888898854 6655555444
No 11
>d2f4za1 d.20.1.1 (A:32-192) Hypothetical protein Tgtwinscan_2721, E2 domain {Toxoplasma gondii [TaxId: 5811]}
Probab=31.39 E-value=55 Score=23.29 Aligned_cols=45 Identities=18% Similarity=0.262 Sum_probs=32.4
Q ss_pred CCeeeEEEEEEcCCCCCcccceeeEEEEECCCCCC--CeEEeeCCCE
Q psy5937 26 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPK--PKRILKEPPY 70 (201)
Q Consensus 26 ~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~--p~r~v~~pPF 70 (201)
+.-.+|.+.+.|+.|..-..=+=++.+.+-+.||. |...+..+-|
T Consensus 41 ~nl~~W~~~I~Gp~~TpY~gg~f~~~i~fp~~YP~~pP~V~F~t~i~ 87 (161)
T d2f4za1 41 GDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKIW 87 (161)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CccceeEEEEeCCCCCccCCCEEEEEEeccCCCCCCCcEEEecCCCC
Confidence 45689999999998766553333888888899854 6666655544
No 12
>d1pzva_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]}
Probab=30.13 E-value=46 Score=23.48 Aligned_cols=45 Identities=18% Similarity=0.237 Sum_probs=33.3
Q ss_pred CeeeEEEEEEcCCCCCcccceeeEEEEECCCC--CCCeEEeeCCCEE
Q psy5937 27 FTHDWEVFVRGVDNADIHNFIDKVVFHLHETF--PKPKRILKEPPYV 71 (201)
Q Consensus 27 ~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf--~~p~r~v~~pPF~ 71 (201)
..+.|.+-+.|+.+..-..-+=++.+.+.+.| ..|...+..+.|.
T Consensus 29 dl~~W~~~i~gp~~tpY~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 75 (161)
T d1pzva_ 29 DIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWH 75 (161)
T ss_dssp CTTEEEEEEECCTTSSCSSCEEEEEEECCTTGGGSCCEEEECSCCCC
T ss_pred CceEEEEEEECCcchhhcCCEEEEEEeCCCCCCCCCCeEEecCCCCC
Confidence 45899999999877655555667888888888 4577776666654
No 13
>d2bepa1 d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=29.48 E-value=64 Score=22.49 Aligned_cols=47 Identities=13% Similarity=0.129 Sum_probs=33.2
Q ss_pred CCCeeeEEEEEEcCCCCCcccceeeEEEEECCCCC--CCeEEeeCCCEE
Q psy5937 25 EGFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFP--KPKRILKEPPYV 71 (201)
Q Consensus 25 ~~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~--~p~r~v~~pPF~ 71 (201)
++.-.+|.+-+.|+.|.....=+=++.+.+.+.|| .|+..+..+.|.
T Consensus 33 ~~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 81 (154)
T d2bepa1 33 DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWH 81 (154)
T ss_dssp SSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred CCChhheEeeEecCccccccCCeeEEEEeccccccCCCCcceecccCCC
Confidence 34567899999998776555434488999999885 466666665543
No 14
>d2ucza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]}
Probab=26.88 E-value=63 Score=22.70 Aligned_cols=46 Identities=11% Similarity=0.275 Sum_probs=31.7
Q ss_pred CCeeeEEEEEEcCCCCCcccceeeEEEEECCCCC--CCeEEeeCCCEE
Q psy5937 26 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFP--KPKRILKEPPYV 71 (201)
Q Consensus 26 ~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~--~p~r~v~~pPF~ 71 (201)
+.-..|.+.+.|+.|..-..=+=++.+.+.++|| .|+..+..+.|.
T Consensus 31 ~nl~~w~~~I~Gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 78 (164)
T d2ucza_ 31 NNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILH 78 (164)
T ss_dssp SCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSC
T ss_pred cchhhhheeeeCCCcccccCCeeEEEEecCCCCCCCCCeEEeecCcee
Confidence 3457899999998876555434477777888884 466666665553
No 15
>d1l0aa1 b.8.1.1 (A:350-504) TNF receptor associated factor 3 (TRAF3) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.37 E-value=39 Score=23.00 Aligned_cols=39 Identities=15% Similarity=0.146 Sum_probs=25.0
Q ss_pred EEeeCCCEEEeeceeeeeEcEEEEEEccCCCC--CceeEEEeec
Q psy5937 63 RILKEPPYVVKESGYAGFTLPIEVYGDLIVPK--SKRTTYIFIK 104 (201)
Q Consensus 63 r~v~~pPF~v~e~GwGeF~i~i~i~f~~~~~k--~~r~i~h~L~ 104 (201)
..+..|||.+...| +...+.+|....... .-..+|+.+.
T Consensus 25 ~~~~S~~F~~~~~G---y~w~l~~yp~G~~~~~~~~lSlyL~l~ 65 (155)
T d1l0aa1 25 LSLYSQPFYTGYFG---YKMCARVYLNGDGMGKGTHLSLFFVIM 65 (155)
T ss_dssp SEEECCCEESSTTS---CEEEEEEETTCCGGGTTTEEEEEEEEE
T ss_pred cEEECcCEEeCCCC---cEEEEEEEeCCCCCCCCCEEEEEEEEc
Confidence 35789999876655 488888888544221 2355666554
No 16
>d1zdna1 d.20.1.1 (A:6-156) Ubiquitin conjugating enzyme, UBC {Human(Homo sapiens), E2 S [TaxId: 9606]}
Probab=26.29 E-value=72 Score=22.24 Aligned_cols=46 Identities=17% Similarity=0.238 Sum_probs=33.5
Q ss_pred CCeeeEEEEEEcCCCCCcccceeeEEEEECCCCC--CCeEEeeCCCEE
Q psy5937 26 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFP--KPKRILKEPPYV 71 (201)
Q Consensus 26 ~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~--~p~r~v~~pPF~ 71 (201)
+...+|.+.+.|+.|..-..=+=++.+.+-++|+ .|...+..+.|.
T Consensus 33 ~dl~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 80 (151)
T d1zdna1 33 EDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFH 80 (151)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred cchheeEEEEecCCCcCccCCceeeeeecCCCCCCCCceeecCCCCCC
Confidence 3458899999998876555555667888888884 477777766553
No 17
>d2a4da1 d.20.1.1 (A:82-220) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 variant 1 [TaxId: 9606]}
Probab=26.17 E-value=95 Score=21.36 Aligned_cols=42 Identities=14% Similarity=0.165 Sum_probs=28.9
Q ss_pred CCeeeEEEEEEcCCCCCcccceeeEEEEECCCCCC--CeEEeeC
Q psy5937 26 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPK--PKRILKE 67 (201)
Q Consensus 26 ~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~--p~r~v~~ 67 (201)
+.-.+|.+.+.|+.+..-..=+=++.+.+-+.|+. |...+..
T Consensus 36 ~nl~~W~~~I~Gp~~TpYegg~f~~~i~fp~~YP~~pP~v~F~t 79 (139)
T d2a4da1 36 MTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVT 79 (139)
T ss_dssp TTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESB
T ss_pred ccccEEEEEEECCCCCchhcCEEEEEEECCCCCCCCCCEEEEec
Confidence 34578999999998766554455677777788844 6555544
No 18
>d2z5da1 d.20.1.1 (A:23-174) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 H [TaxId: 9606]}
Probab=25.73 E-value=65 Score=22.45 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=30.1
Q ss_pred eeeEEEEEEcCCCCCcccceeeEEEEECCCCCC--CeEEeeCCCE
Q psy5937 28 THDWEVFVRGVDNADIHNFIDKVVFHLHETFPK--PKRILKEPPY 70 (201)
Q Consensus 28 th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~--p~r~v~~pPF 70 (201)
-.+|.|.+.|+.|..-..=+=++.+.+-++|+. |+..+..+-|
T Consensus 28 l~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~~pP~v~F~t~i~ 72 (152)
T d2z5da1 28 LNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIF 72 (152)
T ss_dssp TTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred hheEEEEEEcCCCCCcCCCEEEEEEEecCCCCCCCceeeecccCC
Confidence 378999999988765554344788888888855 5666555444
No 19
>d2awfa1 d.20.1.1 (A:7-131) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 G1 [TaxId: 9606]}
Probab=25.70 E-value=86 Score=20.98 Aligned_cols=44 Identities=18% Similarity=0.270 Sum_probs=32.0
Q ss_pred CeeeEEEEEEcCCCCCcccceeeEEEEECCCCCC--CeEEeeCCCE
Q psy5937 27 FTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPK--PKRILKEPPY 70 (201)
Q Consensus 27 ~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~--p~r~v~~pPF 70 (201)
.-.+|.+-++|+++..-..-+=++.+.+-++|+. |...+..+.|
T Consensus 28 dl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 73 (125)
T d2awfa1 28 DLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIW 73 (125)
T ss_dssp CTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred CceEEEEEEeCCCCcccCCCeeEEEEecCCCcCCCCCeEEecCCCC
Confidence 4578999999987765555566778888888844 7777666644
No 20
>d1i7ka_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch10 [TaxId: 9606]}
Probab=25.06 E-value=87 Score=21.65 Aligned_cols=46 Identities=15% Similarity=0.307 Sum_probs=33.4
Q ss_pred CCeeeEEEEEEcCCCCCcccceeeEEEEECCCCC--CCeEEeeCCCEE
Q psy5937 26 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFP--KPKRILKEPPYV 71 (201)
Q Consensus 26 ~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~--~p~r~v~~pPF~ 71 (201)
+.-++|.+-+.|+.|..-..-+=++.+.+-++|+ .|...+..+.|.
T Consensus 28 ~d~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~H 75 (146)
T d1i7ka_ 28 DNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYH 75 (146)
T ss_dssp TEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCS
T ss_pred CcccEEEEEEecCccccccCCEEEEEEEecCCCCcCCceeeecCCCCc
Confidence 4569999999998876555444478888888884 477777766554
No 21
>d1z3da1 d.20.1.1 (A:2-150) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-21.5 kDa [TaxId: 6239]}
Probab=23.73 E-value=94 Score=21.37 Aligned_cols=47 Identities=15% Similarity=0.287 Sum_probs=35.0
Q ss_pred CCeeeEEEEEEcCCCCCcccceeeEEEEECCCCCC--CeEEeeCCCEEE
Q psy5937 26 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPK--PKRILKEPPYVV 72 (201)
Q Consensus 26 ~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~--p~r~v~~pPF~v 72 (201)
+....|.+.+.++.|..-..-+=++.+.+-++|+. |+..+..+.|.-
T Consensus 30 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~~p~~YP~~pP~v~f~t~i~HP 78 (149)
T d1z3da1 30 DNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHP 78 (149)
T ss_dssp TEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred CchhhhceeEECCCCccccCCEEEEEEEecCcCCCCCcEEEecCcccce
Confidence 45689999999988766554455889999999954 777777776643
No 22
>d1yh2a1 d.20.1.1 (A:1-154) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 T [TaxId: 9606]}
Probab=23.65 E-value=85 Score=21.61 Aligned_cols=46 Identities=20% Similarity=0.227 Sum_probs=34.1
Q ss_pred CCeeeEEEEEEcCCCCCcccceeeEEEEECCCCCC--CeEEeeCCCEE
Q psy5937 26 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPK--PKRILKEPPYV 71 (201)
Q Consensus 26 ~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~--p~r~v~~pPF~ 71 (201)
+....|.+.+.|+.|..-..=+=++.+.+-+.|+. |...+..+.|.
T Consensus 29 ~~~~~w~~~I~Gp~~TpY~gg~f~~~i~~p~~YP~~pP~v~f~t~i~H 76 (154)
T d1yh2a1 29 DQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYH 76 (154)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred cchhhhhceEeCCCCCCCCCCEEEEEEecCccccCCCceeeccCCCCc
Confidence 44689999999998866666666788888888854 67766666543
No 23
>d1j7db_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc13 [TaxId: 9606]}
Probab=22.86 E-value=94 Score=21.39 Aligned_cols=49 Identities=18% Similarity=0.245 Sum_probs=34.6
Q ss_pred CCeeeEEEEEEcCCCCCcccceeeEEEEECCCCC--CCeEEeeCCCEEEee
Q psy5937 26 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFP--KPKRILKEPPYVVKE 74 (201)
Q Consensus 26 ~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~--~p~r~v~~pPF~v~e 74 (201)
+....|.+.+.|+.|..-..=+=++.+.+-++|+ .|+..+..+.|.-.-
T Consensus 29 ~n~~~w~~~i~gp~~tpy~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni 79 (149)
T d1j7db_ 29 SNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNV 79 (149)
T ss_dssp SCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred CcccEeeeEEECCcccccCCCEEEEEEecCCcccCCCceeeecCCCCCceE
Confidence 4557899999998776554333488888988885 477777777654433
No 24
>d1y8xa1 d.20.1.1 (A:27-183) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 M [TaxId: 9606]}
Probab=22.72 E-value=60 Score=22.91 Aligned_cols=53 Identities=11% Similarity=0.051 Sum_probs=33.5
Q ss_pred CCeeeEEEEEEcCCCCCcccceeeEEEEECCCCC--CCeEEeeCCCEEEeeceeee
Q psy5937 26 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFP--KPKRILKEPPYVVKESGYAG 79 (201)
Q Consensus 26 ~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~--~p~r~v~~pPF~v~e~GwGe 79 (201)
+.-+.|.+.+ ++.+.--..-+=++.+.+-+.|+ .|+..+..+.|.-.-..-|.
T Consensus 29 ~~l~~w~~~i-~p~~t~Y~gg~f~~~i~fp~~YP~~pP~V~f~t~i~HPnv~~~G~ 83 (157)
T d1y8xa1 29 DDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGN 83 (157)
T ss_dssp TCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCB
T ss_pred CcceEEEEEE-CCCCCCcCCCeEEEEEEecCCCCCCCceeeecccCCCccccccce
Confidence 4568999988 55444334344456666678884 48888888888544333343
No 25
>d1yf9a1 d.20.1.1 (A:13-170) Ubiquitin conjugating enzyme, UBC {Leishmania major [TaxId: 5664]}
Probab=22.29 E-value=79 Score=22.30 Aligned_cols=46 Identities=11% Similarity=0.058 Sum_probs=33.1
Q ss_pred CCeeeEEEEEEcCCCCCcccceeeEEEEECCCCCC--CeEEeeCCCEE
Q psy5937 26 GFTHDWEVFVRGVDNADIHNFIDKVVFHLHETFPK--PKRILKEPPYV 71 (201)
Q Consensus 26 ~~th~W~v~vr~~~~~~~~~~v~kV~f~LH~sf~~--p~r~v~~pPF~ 71 (201)
+...+|.|-+.|+.|..-..=+=++.+.+-++|+. |+..+..+.|.
T Consensus 23 d~~~~w~v~i~Gp~~TpY~gg~f~~~i~fp~~YP~~pP~v~F~t~i~H 70 (158)
T d1yf9a1 23 DTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILH 70 (158)
T ss_dssp SSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred CCceEEEEEEECCCCCCccCcEEEEEEECcccchhhceeEEecCCCCC
Confidence 45688999999998866654344688889898955 66666655443
No 26
>d1czya1 b.8.1.1 (A:350-501) TNF receptor associated factor 2 (TRAF2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.42 E-value=67 Score=21.67 Aligned_cols=39 Identities=8% Similarity=0.236 Sum_probs=23.9
Q ss_pred EEeeCCCEEEeeceeeeeEcEEEEEEccCCC--CCceeEEEeec
Q psy5937 63 RILKEPPYVVKESGYAGFTLPIEVYGDLIVP--KSKRTTYIFIK 104 (201)
Q Consensus 63 r~v~~pPF~v~e~GwGeF~i~i~i~f~~~~~--k~~r~i~h~L~ 104 (201)
..+..|+|.+...| +...|.+|...... ..-..+|+.+.
T Consensus 25 ~~~~Sp~F~~g~~G---y~w~l~~yP~G~~~~~~~~lSlyL~l~ 65 (152)
T d1czya1 25 PAIFSPAFYTSRYG---YKMCLRIYLNGDGTGRGTHLSLFFVVM 65 (152)
T ss_dssp CCEECCCEESSTTS---CEEEEEEETTCCGGGTTTEEEEEEEEE
T ss_pred ceEECcCEEcCCCC---eEEEEEEEeCCCCCCCCCEEEEEEEEc
Confidence 34788999876544 57788999864422 12344555443
Done!