BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5940
(278 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|390344159|ref|XP_003726055.1| PREDICTED: inhibitor of Bruton tyrosine kinase-like
[Strongylocentrotus purpuratus]
Length = 1476
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 137/208 (65%), Gaps = 13/208 (6%)
Query: 5 DNEEMRPIDHLIRDRKIDVSSNQFN--EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRA 62
D +E+ P++ L++D+ V+ + + + Y WGTN+N+NLG G Q++RD PEL+DSL
Sbjct: 118 DKDELTPMELLMKDKPAYVTFDPVDPTQAYSWGTNSNFNLGHGRQRSRDQPELVDSLAAG 177
Query: 63 --SIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGV- 119
SIKQV M KFH++F++ GRV +CGHGQGGRLGLG E++ + P+ L LG
Sbjct: 178 NHSIKQVVMCKFHTLFLTHQGRVLACGHGQGGRLGLGDETTCLRPQLLK------SLGAR 231
Query: 120 -AMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
M + ++DHSVFLM SG+V CG N++ QLG S + P + +LK+ + + G+
Sbjct: 232 CKMMAGARDHSVFLMDSGNVMSCGENAYLQLGHSTIGQKCLLPKTLASKTLKNKE-IRGI 290
Query: 179 CCGRFHSVVYSSREVYTFGIHAGQLGHS 206
GRFH+VVY+ V+T G++AGQLGH+
Sbjct: 291 AAGRFHTVVYTREAVFTLGLNAGQLGHN 318
>gi|321465348|gb|EFX76350.1| hypothetical protein DAPPUDRAFT_322454 [Daphnia pulex]
Length = 1276
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 140/216 (64%), Gaps = 18/216 (8%)
Query: 4 MDNEEMRPIDHLIRDR----KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL 59
+DN+ M P DHLI+DR K+D +N ++V++WG+N+N+ G G QQ+ ++PELLD
Sbjct: 115 LDNDYMSPFDHLIQDRSDLNKLD--ANLPSQVHVWGSNSNF--GLGKQQSPELPELLDVF 170
Query: 60 KRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKD-- 115
+ S IK+V M+KFHSVF++ G+ +SCG GQGG+LGLGSE++V+ P+K++ + +
Sbjct: 171 PKGSGGIKKVVMNKFHSVFLTLSGQAFSCGIGQGGKLGLGSEATVIIPQKISIDAENSSN 230
Query: 116 ----KLGVAM-ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLK 170
K V M A + H++ L G+V G N +HQLG +PPP+ +V+P I R K
Sbjct: 231 SKVKKSAVIMEAVLGTYHTILLNEGGNVLSFGSNMYHQLGHNPPPNQLVAPKVITRFEDK 290
Query: 171 SSQPLI-GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
S +I G+ RFHSV + R VYT G++AG LGH
Sbjct: 291 SKGVIIKGISASRFHSVFWCQRNVYTCGLNAGALGH 326
>gi|149638924|ref|XP_001512685.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Ornithorhynchus
anatinus]
Length = 1300
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 138/233 (59%), Gaps = 8/233 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ D E + +D +++DR + V ++ +VY WG N N+ LG GSQQ++ PEL+D
Sbjct: 113 LYTQDREGLSALDLIMKDRPVHVVFKNSDPTDVYTWGNNVNFTLGHGSQQSKHHPELVDL 172
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R I QV + KFHSVF+S G+V++CGHGQGGRLG G E + + P+ ++ +
Sbjct: 173 FPRTGTYITQVVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDEQTCLVPRLVDGLAGHNC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
+ VA A +DH+V L G V+ GLN+FHQLG+ PPP P + +LK + +I
Sbjct: 233 IQVAAA---KDHTVVLTEEGFVYTFGLNTFHQLGIIPPPPSCSLPRQVQAKNLK-GRSII 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
GV GRFH+V+++ VYT G++ GQLG+ P V P+ + + +D+
Sbjct: 289 GVAAGRFHTVLWTKEAVYTMGLNGGQLGYLPDPNGEKCVTTPRQVSALHHKDV 341
>gi|118088785|ref|XP_419865.2| PREDICTED: inhibitor of Bruton tyrosine kinase [Gallus gallus]
Length = 1357
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 127/209 (60%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR I V EVY WG N N+ LG G QQ++ PEL+D
Sbjct: 113 LYIQDKEGLSALDLVMKDRPIHVVFKKTDLTEVYTWGNNINFTLGHGGQQSKHHPELVDL 172
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R S IKQV + KFHSVF+S G++++CGHGQGGRLG G E + + P+ +
Sbjct: 173 FPRNSVYIKQVVLCKFHSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
+A A +DH+V L G V+ GLN+FHQLG+ PPP++ P + +LK +I
Sbjct: 233 SQIAAA---KDHTVVLTEDGCVYTFGLNTFHQLGILPPPANCSVPRQVQAKNLKGRM-VI 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 289 GVAAGRFHTVLWTKEAVYTMGLNGGQLGY 317
>gi|326916276|ref|XP_003204435.1| PREDICTED: inhibitor of Bruton tyrosine kinase-like [Meleagris
gallopavo]
Length = 1361
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR + V EVY WG N N+ LG G QQ++ PEL+D
Sbjct: 113 LYIQDKEGLSALDLVMKDRPVHVVFKKTDLTEVYTWGNNINFTLGHGGQQSKHHPELVDL 172
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R S IKQV + KFHSVF+S G++++CGHGQGGRLG G E + + P+ +
Sbjct: 173 FPRNSVYIKQVVLCKFHSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
+A A +DH+V L G V+ GLN+FHQLG+ PPP++ P + +LK +I
Sbjct: 233 SQIAAA---KDHTVVLTEDGCVYTFGLNTFHQLGILPPPANCSVPRQVQAKNLKGRM-VI 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 289 GVAAGRFHTVLWTKEAVYTMGLNGGQLGY 317
>gi|47216007|emb|CAF96255.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1290
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 129/209 (61%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
++ +D E + +D ++DR V + EVY WG N N++LG G+Q++R PEL+D
Sbjct: 113 LSTLDKEGLSVLDITMKDRPSHVVFKTADPTEVYTWGNNTNFSLGHGNQESRQHPELVDV 172
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R IKQV + KFHSVF+S G+V++CGHGQGGRLG G E + + P+ +
Sbjct: 173 FARTGVYIKQVVLCKFHSVFLSQKGQVFTCGHGQGGRLGHGDEQTYLVPRMVEGLTSHHC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
+A A +DH+V L G V+ GLN+FHQLGLSPPP+ P + +LK + ++
Sbjct: 233 SQIAAA---KDHTVVLTEEGYVYTFGLNTFHQLGLSPPPASAYVPKQVFSKTLK-GRTVV 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 289 GVAAGRFHTVLWTREAVYTMGLNGGQLGY 317
>gi|224048498|ref|XP_002189253.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Taeniopygia
guttata]
Length = 1355
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 128/209 (61%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFN--EVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR I V + + EVY WG+N N+ LG G QQ R PEL+D
Sbjct: 113 LYIQDKEGLSALDLVMKDRPIHVVFKKTDPMEVYTWGSNINFTLGHGGQQGRHHPELVDL 172
Query: 59 LKR--ASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R IKQV + KFHSVF+S G+V++CGHGQGGRLG G E + + P+ +
Sbjct: 173 FPRNGVYIKQVVLCKFHSVFLSHKGQVYTCGHGQGGRLGHGDEQTCLVPRLVEGLTGHQC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
+A A +DH+V L G V+ GLN+FHQLG+ PPPS+ P + +LK +I
Sbjct: 233 SQIAAA---KDHTVVLTEDGYVYTFGLNTFHQLGILPPPSNCSVPRQVQAKNLKGRM-VI 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 289 GVAAGRFHTVLWTKEAVYTMGLNGGQLGY 317
>gi|427782995|gb|JAA56949.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 1182
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 134/205 (65%), Gaps = 6/205 (2%)
Query: 5 DNEEMRPIDHLIRDRK--IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKR- 61
D E + P+D +RDR I+ + + EVY+WG+N N+ LG S+Q+ PE+L+S +R
Sbjct: 122 DYEGLTPVDLAVRDRMPYIEYAPSDPCEVYVWGSNKNFTLGLASEQSPKDPEVLESFRRD 181
Query: 62 -ASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
S+++V M KFHSVF+++ G V+ CGHG GGRLGL SE + +S +L K V
Sbjct: 182 GVSVQKVEMQKFHSVFLTNAGDVYVCGHGLGGRLGLNSEKTTLSVTQLPLAKVNKGRCVD 241
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCC 180
+AS QDH+V LM G V CGLN+ HQLGL PPP ++SP PI LK + +GVC
Sbjct: 242 IAS-GQDHTVMLMDDGQVLTCGLNNHHQLGLIPPPPQVLSPRPISMKFLKEKK-AVGVCA 299
Query: 181 GRFHSVVYSSREVYTFGIHAGQLGH 205
++H+V+Y+ VYTFG++AGQLGH
Sbjct: 300 AKYHTVIYTEDGVYTFGLNAGQLGH 324
>gi|395534526|ref|XP_003769292.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Sarcophilus
harrisii]
Length = 1290
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 113 LYIQDREGLSALDLVMKDRPAHVVFKNTDPTDVYTWGNNINFTLGHGSQNSKHHPELVDL 172
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R I KQV + FHSVF+S G+V++CGHGQGGRLG G E + + P+ + +
Sbjct: 173 FSRTGIYIKQVVLCTFHSVFLSQKGQVYTCGHGQGGRLGHGDEQTCLVPRLVEGLIGHNC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH++ L GSV+ GLN+FHQLG+SPPP+ P I +LK + +I
Sbjct: 233 SQVAAA---KDHTIVLTEEGSVYTFGLNTFHQLGISPPPARCSVPRQIQAKNLK-GRTII 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 289 GVAAGRFHTVLWTKEAVYTMGLNGGQLGY 317
>gi|410904961|ref|XP_003965960.1| PREDICTED: inhibitor of Bruton tyrosine kinase-like [Takifugu
rubripes]
Length = 1328
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 129/209 (61%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
++ +D E + +D ++DR V + EVY WG N N++LG G+Q++R PEL+D
Sbjct: 113 LSTIDKEGLSVLDITMKDRPSHVVFKTADPTEVYTWGNNTNFSLGHGNQESRQHPELVDV 172
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R IKQV + KFHSVF+S G+V++CGHGQGGRLG G E + + P+ +
Sbjct: 173 FARTGVYIKQVVLCKFHSVFLSQKGQVFTCGHGQGGRLGHGDEQTYLVPRMVEGLTSHHC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
+A A +DH+V L G V+ GLN+FHQLGL+PPP+ P + +LK + ++
Sbjct: 233 SQIAAA---KDHTVVLTEGGYVYTFGLNTFHQLGLAPPPASAYVPKQVFSKTLK-GRSVV 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 289 GVAAGRFHTVLWTKEAVYTMGLNGGQLGY 317
>gi|334324343|ref|XP_001375472.2| PREDICTED: inhibitor of Bruton tyrosine kinase [Monodelphis
domestica]
Length = 1359
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 129/209 (61%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 113 LYIQDKEGLSALDLVMKDRPAHVVFKNTDPTDVYTWGNNVNFTLGHGSQNSKHHPELVDL 172
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
RA I KQV + FHSVF+S G+V++CGHGQGGRLG G E + + P+ + +
Sbjct: 173 FSRAGIYIKQVVLCTFHSVFLSQKGQVYTCGHGQGGRLGHGDEQTCLVPRLVEGLIGHNC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH++ L G+V+ GLN+FHQLG+SPPP+ P I +LK + +I
Sbjct: 233 SQVAAA---KDHTIVLTEEGAVYTFGLNTFHQLGISPPPARSNVPRQIQAKTLK-GRIII 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 289 GVAAGRFHTVLWTKEAVYTMGLNGGQLGY 317
>gi|311244418|ref|XP_001924905.2| PREDICTED: inhibitor of Bruton tyrosine kinase [Sus scrofa]
Length = 1345
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 140/250 (56%), Gaps = 8/250 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D L++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLLMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS+ P + LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSNCNVPRQMQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFES 236
GV GRFH+V+++ VYT G++ GQLGH V P+ + + +D+ + +
Sbjct: 288 GVAAGRFHTVLWTREAVYTLGLNGGQLGHLLDPSGEKCVTAPRQVSALHHKDIALSLVAA 347
Query: 237 NRGTKHSFTA 246
+ G TA
Sbjct: 348 SDGATVCVTA 357
>gi|348532093|ref|XP_003453541.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Oreochromis
niloticus]
Length = 1339
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 126/209 (60%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
++ D E + +D ++DR V + EVY WG N N++LG G+Q++R PEL+D
Sbjct: 113 LSTQDKEGLSVLDLTMKDRPSHVLFRNTDPTEVYTWGNNTNFSLGHGNQESRQHPELVDV 172
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R IKQV + KFHSVF+S G+V++CGHGQGGRLG G E + + P+ +
Sbjct: 173 FARTGVYIKQVVLCKFHSVFLSQKGQVFTCGHGQGGRLGHGDEQTYLVPRMVEGLMSHHC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN+FHQLGL PPP+ P + LK + +I
Sbjct: 233 SQVAAA---KDHTVVLTEEGYVYTFGLNTFHQLGLVPPPASAFVPKQVFSKMLK-GRTVI 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 289 GVAAGRFHTVLWTREAVYTMGLNGGQLGY 317
>gi|270010253|gb|EFA06701.1| hypothetical protein TcasGA2_TC009632 [Tribolium castaneum]
Length = 1132
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 120/180 (66%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKR----ASIKQVCMDKFHSVFVSDDGRVWS 85
E+Y WG+N N +LG QQ+R PELLD + S+++V +KFHSV V+ G V++
Sbjct: 143 ELYAWGSNCNNSLG--PQQSRSTPELLDVFHKKYPDESVRKVVCEKFHSVIVTSGGLVYT 200
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
CGHGQGGRLGLG++ +VV+P+ + F + + + ++S+DHSVFL G+++ CGLN+
Sbjct: 201 CGHGQGGRLGLGTQRTVVAPEMVTFPQTHEPITCVDVAVSRDHSVFLCSDGNLYSCGLNT 260
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
LGL PPP+ I+ PT + K + + VC GR+HSV + + +YT+G++AGQLGH
Sbjct: 261 HRVLGLHPPPAQILVPTLV-----KHLEQVRHVCAGRYHSVAWGPKCLYTWGLNAGQLGH 315
>gi|189238964|ref|XP_973271.2| PREDICTED: similar to rCG25208 [Tribolium castaneum]
Length = 1148
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 120/180 (66%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKR----ASIKQVCMDKFHSVFVSDDGRVWS 85
E+Y WG+N N +LG QQ+R PELLD + S+++V +KFHSV V+ G V++
Sbjct: 159 ELYAWGSNCNNSLG--PQQSRSTPELLDVFHKKYPDESVRKVVCEKFHSVIVTSGGLVYT 216
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
CGHGQGGRLGLG++ +VV+P+ + F + + + ++S+DHSVFL G+++ CGLN+
Sbjct: 217 CGHGQGGRLGLGTQRTVVAPEMVTFPQTHEPITCVDVAVSRDHSVFLCSDGNLYSCGLNT 276
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
LGL PPP+ I+ PT + K + + VC GR+HSV + + +YT+G++AGQLGH
Sbjct: 277 HRVLGLHPPPAQILVPTLV-----KHLEQVRHVCAGRYHSVAWGPKCLYTWGLNAGQLGH 331
>gi|449283565|gb|EMC90170.1| Inhibitor of Bruton tyrosine kinase, partial [Columba livia]
Length = 1359
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 127/209 (60%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFN--EVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ V D E + +D +++DR + V + + EVY WG N N+ LG G QQ + PEL+D
Sbjct: 115 LYVQDKEGLSALDLVMKDRPVHVVFKKTDPMEVYTWGNNRNFTLGHGGQQGKHHPELVDL 174
Query: 59 LKR--ASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R IKQV + +FHSVF+S G+V++CGHGQGGRLG G E + + P+ +
Sbjct: 175 FPRNGVYIKQVVLCEFHSVFLSHKGQVYTCGHGQGGRLGHGDEQTCLVPRLVEGLAGHQC 234
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
+A A +DH+V L G V+ GLN+FHQLG+ PPP++ P + +LK +I
Sbjct: 235 SQIAAA---KDHTVILTEDGYVYTFGLNTFHQLGILPPPANCSVPRQVQAKNLKGRM-VI 290
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 291 GVAAGRFHTVLWTKEAVYTMGLNGGQLGY 319
>gi|301618184|ref|XP_002938503.1| PREDICTED: inhibitor of Bruton tyrosine kinase-like [Xenopus
(Silurana) tropicalis]
Length = 1332
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 130/209 (62%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDR--KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D + P+D +++DR I ++ EVY WG N N+ LG G+QQ++ PELL++
Sbjct: 113 LYIQDKDGYTPLDVVMKDRPPHIIFKTSDPTEVYTWGDNVNFTLGHGTQQSKHHPELLET 172
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHGQGGRLG G E + + P+ +
Sbjct: 173 FPRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELTCLVPRLVEGLSTHPC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN+FHQLG+ PPP + P + ++K + ++
Sbjct: 233 AQVAAA---KDHTVVLSEDGYVYTFGLNTFHQLGIQPPPPNSNVPKQVQAKTMK-GKTVL 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 289 GVAAGRFHTVLWTKDAVYTVGLNGGQLGY 317
>gi|326674633|ref|XP_003200174.1| PREDICTED: inhibitor of Bruton tyrosine kinase-like [Danio rerio]
Length = 1326
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 142/244 (58%), Gaps = 8/244 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+++ D E + +D ++DR V + EVY WG N N++LG G+Q++R PE++D
Sbjct: 113 LSMQDKEGLSVLDLTMKDRPAHVVYQNTDPTEVYTWGNNTNFSLGHGNQESRQHPEIVDL 172
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHGQGGRLG G E++ + P+ +
Sbjct: 173 FSRSGIYVKQVVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDENTYLVPRMVEGLLSHHC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
+A A +DH+V L G V+ GLN+ HQLGL PPP+ P + SLK + +I
Sbjct: 233 SQIAAA---RDHTVVLTEEGYVYTFGLNTHHQLGLGPPPTSSSVPKQVTSKSLK-GRSVI 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFES 236
GV GRFH+V+++ VYT G++ GQLG+ V P+ + ++ +D+ + +
Sbjct: 289 GVAAGRFHTVLWTRDAVYTVGLNGGQLGYLLEPNGEKCVTVPRQVSALLHKDVTISMVAA 348
Query: 237 NRGT 240
+ G
Sbjct: 349 SNGA 352
>gi|241157302|ref|XP_002407995.1| conserved hypothetical protein [Ixodes scapularis]
gi|215494274|gb|EEC03915.1| conserved hypothetical protein [Ixodes scapularis]
Length = 617
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 135/210 (64%), Gaps = 7/210 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDR--KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+TV D + P+D +RDR I+ S++ +EVY+WG+N N+ LG S+Q+ PE+L++
Sbjct: 116 LTVTDFDGCTPLDLAVRDRLPYIEYSASDPSEVYVWGSNKNFTLGLASEQSPKYPEILEA 175
Query: 59 LKR--ASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
+R SI +V M KFHSVF+S+ G V+ CGHG GGRLGL SE + ++ KL K
Sbjct: 176 FRRDGVSIHKVEMQKFHSVFLSNGGEVFVCGHGLGGRLGLNSEMTTLNVTKL-VSLAKMG 234
Query: 117 LGVAMASIS-QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
LG + S QDH+VFLM G V CGLN+ HQLGL PPP ++ P I LK + L
Sbjct: 235 LGKCVDVASGQDHTVFLMEDGQVLTCGLNTHHQLGLLPPPPQVLCPRAISMKFLKDKKAL 294
Query: 176 IGVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GVC R+H+V+Y+ +Y FG++AGQLGH
Sbjct: 295 -GVCAARYHTVIYTKDAIYNFGLNAGQLGH 323
>gi|281339015|gb|EFB14599.1| hypothetical protein PANDA_004411 [Ailuropoda melanoleuca]
Length = 1353
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 134/233 (57%), Gaps = 8/233 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKTTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLIPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P + LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQMQAKYLK-GRTVI 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
GV GRFH+V+++ VYT G++ GQLG+ P V P+ + + +D+
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLGYLPDPNGEKYVTAPRQVSALHHKDI 340
>gi|432908042|ref|XP_004077729.1| PREDICTED: inhibitor of Bruton tyrosine kinase-like [Oryzias
latipes]
Length = 1332
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 125/209 (59%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
++ D E +D ++DR V + EVY WG N N++LG G+Q++R PEL+D
Sbjct: 113 LSTQDKEGFSVLDLTMKDRPAHVVFKNTDPTEVYTWGNNTNFSLGHGNQESRQHPELVDV 172
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHGQGGRLG G E + + P+ +
Sbjct: 173 FARSGVYIKQVVLCKFHSVFLSQKGQVFTCGHGQGGRLGHGDEQTYLVPRMVEGLMSHHC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN+FHQLGL+PPP+ P + LK +
Sbjct: 233 SQVAAA---KDHTVVLTEEGYVYTFGLNTFHQLGLTPPPASAHVPKQVFAKMLKGRM-VT 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 289 GVAAGRFHTVLWTREAVYTMGLNGGQLGY 317
>gi|301761850|ref|XP_002916348.1| PREDICTED: LOW QUALITY PROTEIN: inhibitor of Bruton tyrosine
kinase-like [Ailuropoda melanoleuca]
Length = 1394
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 134/233 (57%), Gaps = 8/233 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 153 LYIQDKEGLSALDLVMKDRPTHVVFKTTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 212
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 213 FSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLIPRLVEGLSGHNC 272
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P + LK + +I
Sbjct: 273 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQMQAKYLK-GRTVI 328
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
GV GRFH+V+++ VYT G++ GQLG+ P V P+ + + +D+
Sbjct: 329 GVAAGRFHTVLWTREAVYTMGLNGGQLGYLPDPNGEKYVTAPRQVSALHHKDI 381
>gi|355695431|gb|AES00008.1| inhibitor of Bruton agammaglobulinemia tyrosine kinase [Mustela
putorius furo]
Length = 388
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 133/233 (57%), Gaps = 8/233 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 21 LYIQDKEGLSALDLVMKDRPTHVVFKPTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 80
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 81 FSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLIPRLVEGLSGHNC 140
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P + LK + +I
Sbjct: 141 SQVAAA---KDHTVVLTEDGCVYTFGLNMFHQLGIIPPPSSCNVPRQMQAKYLK-GRTII 196
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
GV GRFH+V+++ VYT G++ GQLG+ P V P+ + + +D+
Sbjct: 197 GVAAGRFHTVLWTREAVYTMGLNGGQLGYLPDPNGEKYVTAPRQVSALHHKDI 249
>gi|73973859|ref|XP_539018.2| PREDICTED: inhibitor of Bruton tyrosine kinase [Canis lupus
familiaris]
Length = 1351
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 133/233 (57%), Gaps = 8/233 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKTTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ +
Sbjct: 172 FSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLIPRLVEGLSGHTC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P + LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQMQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
GV GRFH+V+++ VYT G++ GQLG+ P V P+ + + +D+
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLGYLPDPNGEKYVTAPRQVSALHHKDI 340
>gi|426234379|ref|XP_004011173.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Ovis aries]
Length = 1414
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 140/251 (55%), Gaps = 8/251 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 174 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 233
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 234 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNC 293
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLGL PPPS P + LK + +I
Sbjct: 294 SQVAAA---KDHTVVLTEDGYVYTFGLNIFHQLGLIPPPSSCNVPRQMQAKYLK-GRTII 349
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFES 236
GV GRFH+V+++ VYT G++ GQLG+ V P+ + + +D+ + +
Sbjct: 350 GVAAGRFHTVLWTREAVYTMGLNGGQLGYLLDPNGEKCVTAPRQVSALHHKDITLSLVAA 409
Query: 237 NRGTKHSFTAE 247
+ G TA+
Sbjct: 410 SDGATVCVTAK 420
>gi|351711423|gb|EHB14342.1| Inhibitor of Bruton tyrosine kinase [Heterocephalus glaber]
Length = 1324
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 125/209 (59%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D L++DR V S +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 111 LYMQDKEGLSALDLLMKDRPTHVVFKSTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 170
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 171 FSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNC 230
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P + LK + +I
Sbjct: 231 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQMQAKYLK-GRTVI 286
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 287 GVAAGRFHTVLWTREAVYTMGLNGGQLGY 315
>gi|403261232|ref|XP_003923029.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Saimiri boliviensis
boliviensis]
Length = 1353
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 125/209 (59%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 288 GVAAGRFHTVLWAREAVYTMGLNGGQLGY 316
>gi|219520056|gb|AAI43737.1| IBTK protein [Homo sapiens]
Length = 1152
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|329664969|ref|NP_001192969.1| inhibitor of Bruton tyrosine kinase [Bos taurus]
gi|296484243|tpg|DAA26358.1| TPA: KIAA1417 protein-like [Bos taurus]
Length = 1352
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 125/209 (59%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLGL PPPS P + LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGLIPPPSSCNVPRQMQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLGY 316
>gi|332218354|ref|XP_003258323.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Nomascus
leucogenys]
Length = 1353
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNSHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|57863304|ref|NP_056340.2| inhibitor of Bruton tyrosine kinase [Homo sapiens]
gi|134034141|sp|Q9P2D0.3|IBTK_HUMAN RecName: Full=Inhibitor of Bruton tyrosine kinase; Short=IBtk
gi|66774231|gb|AAY55906.1| inhibitor of Bruton's tyrosine kinase-alpha [Homo sapiens]
gi|109731371|gb|AAI13697.1| Inhibitor of Bruton agammaglobulinemia tyrosine kinase [Homo
sapiens]
gi|109731796|gb|AAI13699.1| Inhibitor of Bruton agammaglobulinemia tyrosine kinase [Homo
sapiens]
gi|119569070|gb|EAW48685.1| inhibitor of Bruton agammaglobulinemia tyrosine kinase, isoform
CRA_a [Homo sapiens]
Length = 1353
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|390461839|ref|XP_002746810.2| PREDICTED: inhibitor of Bruton tyrosine kinase [Callithrix jacchus]
Length = 1196
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 133/233 (57%), Gaps = 8/233 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFN--EVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPADVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
GV GRFH+V+++ VYT G++ GQLG+ V P+ + + +D+
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLGYLLDPNGEKCVTAPRQVSALHHKDI 340
>gi|297678563|ref|XP_002817137.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Pongo abelii]
Length = 1353
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|219518906|gb|AAI43746.1| IBTK protein [Homo sapiens]
Length = 1338
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|119569073|gb|EAW48688.1| inhibitor of Bruton agammaglobulinemia tyrosine kinase, isoform
CRA_d [Homo sapiens]
Length = 1191
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|395848275|ref|XP_003796779.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Otolemur garnettii]
Length = 1352
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 127/209 (60%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V S +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLIMKDRPTHVVFKSTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRA--SIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ SIKQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FPRSGVSIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLIPRLVEGLSGHN- 230
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
++ + ++DH+V L G V+ GLN FHQLG+ PPPS P + LK + +I
Sbjct: 231 --CSLVAAAEDHTVVLTEDGCVYTFGLNVFHQLGIIPPPSSCNVPRQMQGKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV G+FH+V+++ VYT G++ GQLG+
Sbjct: 288 GVAAGKFHTVLWTRDAVYTLGLNGGQLGY 316
>gi|20521908|dbj|BAA92655.2| KIAA1417 protein [Homo sapiens]
Length = 1379
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 138 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 197
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 198 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNC 257
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 258 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 313
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 314 GVAAGRFHTVLWTREAVYTMGLNGGQLG 341
>gi|410041003|ref|XP_003950928.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Pan troglodytes]
Length = 1152
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
G+ GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GIAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|55730093|emb|CAH91771.1| hypothetical protein [Pongo abelii]
Length = 709
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|410041001|ref|XP_003950927.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Pan troglodytes]
Length = 1338
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
G+ GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GIAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|147902812|ref|NP_001084927.1| inhibitor of Bruton tyrosine kinase [Xenopus laevis]
gi|82202103|sp|Q6NRS1.1|IBTK_XENLA RecName: Full=Inhibitor of Bruton tyrosine kinase; Short=IBtk
gi|47122993|gb|AAH70653.1| MGC82217 protein [Xenopus laevis]
Length = 1339
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 130/209 (62%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDR--KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D + P+D +++DR I ++ E+Y WG N N+ LG G+QQ++ PEL++
Sbjct: 113 LYIQDKDGYTPLDLVMKDRPPHIVFKTSDPTELYTWGDNVNFTLGHGTQQSKHHPELVEM 172
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQ+ + KFHSVF+S G+V++CGHGQGGRLG G E + + P+ + +
Sbjct: 173 FPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELTCLVPRLVEGLRGHPC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN+FHQLG+ PPP + P I ++K + ++
Sbjct: 233 TQVAGA---KDHTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNVPRQIQAKTMK-GKTVL 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 289 GVAAGRFHTVLWTKDAVYTVGLNGGQLGY 317
>gi|114608250|ref|XP_001148806.1| PREDICTED: inhibitor of Bruton tyrosine kinase isoform 3 [Pan
troglodytes]
gi|397490901|ref|XP_003816422.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Pan paniscus]
gi|410219734|gb|JAA07086.1| inhibitor of Bruton agammaglobulinemia tyrosine kinase [Pan
troglodytes]
gi|410267108|gb|JAA21520.1| inhibitor of Bruton agammaglobulinemia tyrosine kinase [Pan
troglodytes]
gi|410305092|gb|JAA31146.1| inhibitor of Bruton agammaglobulinemia tyrosine kinase [Pan
troglodytes]
gi|410350273|gb|JAA41740.1| inhibitor of Bruton agammaglobulinemia tyrosine kinase [Pan
troglodytes]
Length = 1353
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
G+ GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GIAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|66774233|gb|AAY55907.1| inhibitor of Bruton's tyrosine kinase-beta [Homo sapiens]
Length = 1196
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|291396532|ref|XP_002714594.1| PREDICTED: inhibitor of Bruton's tyrosine kinase [Oryctolagus
cuniculus]
Length = 1353
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 125/209 (59%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPP+ P + LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIVPPPASCNVPRQMQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLGY 316
>gi|402867515|ref|XP_003897893.1| PREDICTED: inhibitor of Bruton tyrosine kinase-like [Papio anubis]
Length = 1352
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 123/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPSHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHSC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---EDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|431838188|gb|ELK00120.1| Inhibitor of Bruton tyrosine kinase [Pteropus alecto]
Length = 1350
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 139/250 (55%), Gaps = 8/250 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPAHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P + LK + +I
Sbjct: 232 SQVAAA---EDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQMQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFES 236
GV G+FH+V+++ VYT G++ GQLG+ V P+ + + +D+ + +
Sbjct: 288 GVAAGKFHTVLWTREAVYTMGLNGGQLGYLLDPNGEKCVTAPRQVSALHHKDVTLSLVAA 347
Query: 237 NRGTKHSFTA 246
+ G TA
Sbjct: 348 SDGATVCVTA 357
>gi|383417341|gb|AFH31884.1| inhibitor of Bruton tyrosine kinase [Macaca mulatta]
Length = 1352
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 123/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PE++D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPSHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPEVVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHSC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---EDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|380811552|gb|AFE77651.1| inhibitor of Bruton tyrosine kinase [Macaca mulatta]
Length = 1352
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 123/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PE++D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPSHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPEVVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHSC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---EDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|355748719|gb|EHH53202.1| hypothetical protein EGM_13794 [Macaca fascicularis]
Length = 1352
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 123/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PE++D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPSHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPEVVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHSC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---EDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLG 315
>gi|417406370|gb|JAA49846.1| Putative inhibitor of bruton tyrosine kinase kiaa1417 [Desmodus
rotundus]
Length = 1354
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 125/209 (59%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKYHPELVDL 171
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHG GGRLG E + + P+ + +
Sbjct: 172 FSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHADEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH++ L G V+ G+N+FHQLG+ PPPS P + LK + +I
Sbjct: 232 SQVAAA---EDHTIVLTEDGCVYTFGVNTFHQLGIIPPPSSCNVPRQMQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLGY 316
>gi|344264695|ref|XP_003404426.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Loxodonta africana]
Length = 1352
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPRHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ +
Sbjct: 172 FSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHSC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLGL PPP P + LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNVFHQLGLIPPPPSCNVPRQMQAKYLK-GKTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLGY 316
>gi|426353827|ref|XP_004044381.1| PREDICTED: LOW QUALITY PROTEIN: inhibitor of Bruton tyrosine kinase
[Gorilla gorilla gorilla]
Length = 1352
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 110/177 (62%), Gaps = 6/177 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASI--KQVCMDKFHSVFVSDDGRVWSCG 87
+VY WG N N+ LG GSQ ++ PEL+D R+ I KQV + KFHSVF+S G+V++CG
Sbjct: 142 DVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCG 201
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
HG GGRLG G E + + P+ + + VA A +DH+V L G V+ GLN FH
Sbjct: 202 HGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAA---KDHTVVLTEDGCVYTFGLNIFH 258
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
QLG+ PPPS P I LK + +IGV GRFH+V+++ VYT G++ GQLG
Sbjct: 259 QLGIIPPPSSCNVPRQIQAKYLK-GRTIIGVAAGRFHTVLWTREAVYTMGLNGGQLG 314
>gi|297291228|ref|XP_002803869.1| PREDICTED: inhibitor of Bruton tyrosine kinase-like [Macaca
mulatta]
Length = 1298
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 109/177 (61%), Gaps = 6/177 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASI--KQVCMDKFHSVFVSDDGRVWSCG 87
+VY WG N N+ LG GSQ ++ PE++D R+ I KQV + KFHSVF+S G+V++CG
Sbjct: 112 DVYTWGDNTNFTLGHGSQNSKHHPEVVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCG 171
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
HG GGRLG G E + + P+ + VA A +DH+V L G V+ GLN FH
Sbjct: 172 HGPGGRLGHGDEQTCLVPRLVEGLNGHSCSQVAAA---EDHTVVLTEDGCVYTFGLNIFH 228
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
QLG+ PPPS P I LK + +IGV GRFH+V+++ VYT G++ GQLG
Sbjct: 229 QLGIIPPPSSCNVPRQIQAKYLK-GRTIIGVAAGRFHTVLWTREAVYTMGLNGGQLG 284
>gi|293349351|ref|XP_001062352.2| PREDICTED: inhibitor of Bruton tyrosine kinase [Rattus norvegicus]
gi|149019004|gb|EDL77645.1| rCG25208, isoform CRA_c [Rattus norvegicus]
Length = 1352
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 127/209 (60%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD- 57
+ + D E + P+D L++DR V + EVY WG N N+ LG GSQ ++ PELLD
Sbjct: 112 LYMQDKEGLSPLDLLMKDRPAHVVFKNTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDL 171
Query: 58 -SLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
S R +KQV + KFHSVF+S G+V++CGHG+GGRLG G E + + P+ +
Sbjct: 172 FSRSRVYVKQVVLCKFHSVFLSQQGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHSC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN+FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNTFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLGH
Sbjct: 288 GVAAGRFHTVLWTREAVYTLGLNGGQLGH 316
>gi|149019003|gb|EDL77644.1| rCG25208, isoform CRA_b [Rattus norvegicus]
Length = 887
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 127/209 (60%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD- 57
+ + D E + P+D L++DR V + EVY WG N N+ LG GSQ ++ PELLD
Sbjct: 112 LYMQDKEGLSPLDLLMKDRPAHVVFKNTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDL 171
Query: 58 -SLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
S R +KQV + KFHSVF+S G+V++CGHG+GGRLG G E + + P+ +
Sbjct: 172 FSRSRVYVKQVVLCKFHSVFLSQQGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHSC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN+FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNTFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLGH
Sbjct: 288 GVAAGRFHTVLWTREAVYTLGLNGGQLGH 316
>gi|124486857|ref|NP_001074751.1| inhibitor of Bruton tyrosine kinase [Mus musculus]
gi|341941060|sp|Q6ZPR6.3|IBTK_MOUSE RecName: Full=Inhibitor of Bruton tyrosine kinase; Short=IBtk
gi|148694536|gb|EDL26483.1| mCG128548, isoform CRA_d [Mus musculus]
gi|223460980|gb|AAI37799.1| Ibtk protein [Mus musculus]
Length = 1352
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 126/209 (60%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + P+D L++DR V EVY WG N N+ LG GSQ ++ PELLD
Sbjct: 112 LYMQDKEGLSPLDLLMKDRPTHVVFKDTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ + KQV + KFHSVF+S G+V++CGHG+GGRLG G E + + P+ + +
Sbjct: 172 FSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPP+ P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLGH
Sbjct: 288 GVAAGRFHTVLWTREAVYTLGLNGGQLGH 316
>gi|148694533|gb|EDL26480.1| mCG128548, isoform CRA_a [Mus musculus]
Length = 889
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 139/244 (56%), Gaps = 8/244 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFN--EVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + P+D L++DR V + EVY WG N N+ LG GSQ ++ PELLD
Sbjct: 112 LYMQDKEGLSPLDLLMKDRPTHVVFKDTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ + KQV + KFHSVF+S G+V++CGHG+GGRLG G E + + P+ + +
Sbjct: 172 FSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPP+ P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFES 236
GV GRFH+V+++ VYT G++ GQLGH V P+ + + +D+ + +
Sbjct: 288 GVAAGRFHTVLWTREAVYTLGLNGGQLGHLLDPNGEKCVTTPRQVSALHHKDIAVSLVAA 347
Query: 237 NRGT 240
+ G
Sbjct: 348 SDGA 351
>gi|149019002|gb|EDL77643.1| rCG25208, isoform CRA_a [Rattus norvegicus]
Length = 331
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 128/216 (59%), Gaps = 8/216 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD- 57
+ + D E + P+D L++DR V + EVY WG N N+ LG GSQ ++ PELLD
Sbjct: 112 LYMQDKEGLSPLDLLMKDRPAHVVFKNTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDL 171
Query: 58 -SLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
S R +KQV + KFHSVF+S G+V++CGHG+GGRLG G E + + P+ +
Sbjct: 172 FSRSRVYVKQVVLCKFHSVFLSQQGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHSC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN+FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNTFHQLGIIPPPSSCNVPRQIQAKYLKG-RTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSS 212
GV GRFH+V+++ VYT G++ GQLG V S
Sbjct: 288 GVAAGRFHTVLWTREAVYTLGLNGGQLGKKSFMVIS 323
>gi|195401737|ref|XP_002059468.1| GJ17202 [Drosophila virilis]
gi|194142474|gb|EDW58880.1| GJ17202 [Drosophila virilis]
Length = 1187
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 136/253 (53%), Gaps = 15/253 (5%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK 60
+ ++D + P+ + R ID ++ NE +WG+N NYNLG G++Q P+ LD +
Sbjct: 117 LELLDEDTRCPLQAICRKCDIDANAESHNEALVWGSNKNYNLGIGNEQNTLTPQALDFFR 176
Query: 61 RASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
++++ + V + +HS+F G +++ GHG+GGRLG+G E+S+ +PK++ +
Sbjct: 177 KSNLWLEHVALGAYHSLFCDKRGHLYAVGHGKGGRLGIGQENSLPAPKRVKLPLKHNDER 236
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
+ S+S+ HS+ L V+ CG+N HQLG+ H+ + + K + L+ V
Sbjct: 237 IISLSVSRQHSLLLTNRSLVYACGINDTHQLGVRDAGEHLTTFKEVVALRDKGASDLLRV 296
Query: 179 CCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQA----TIIREDLPGFIF 234
HS+ YSSR +Y +G + GQLG ++ ++ +++ P + T+IR
Sbjct: 297 IACDHHSIAYSSRCIYVWGANQGQLG---ISCNTRTIVAPVLMKLADRTVIR------FV 347
Query: 235 ESNRGTKHSFTAE 247
E+N +TAE
Sbjct: 348 EANNAATVVYTAE 360
>gi|74182988|dbj|BAE20460.1| unnamed protein product [Mus musculus]
Length = 742
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 139/244 (56%), Gaps = 8/244 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFN--EVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + P+D L++DR V + EVY WG N N+ LG GSQ ++ PELLD
Sbjct: 112 LYMQDKEGLSPLDLLMKDRPTHVVFKDTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ + KQV + KFHSVF+S G+V++CGHG+GGRLG G E + + P+ + +
Sbjct: 172 FSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPP+ P I L+ + +I
Sbjct: 232 SQVAAA---KDHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLEG-RTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFES 236
GV GRFH+V+++ VYT G++ GQLGH V P+ + + +D+ + +
Sbjct: 288 GVAAGRFHTVLWTREAVYTLGLNGGQLGHLLDPNGEKCVTTPRQVSALHHKDIAVSLVAA 347
Query: 237 NRGT 240
+ G
Sbjct: 348 SDGA 351
>gi|148694534|gb|EDL26481.1| mCG128548, isoform CRA_b [Mus musculus]
Length = 331
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 126/208 (60%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFN--EVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + P+D L++DR V + EVY WG N N+ LG GSQ ++ PELLD
Sbjct: 112 LYMQDKEGLSPLDLLMKDRPTHVVFKDTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ + KQV + KFHSVF+S G+V++CGHG+GGRLG G E + + P+ + +
Sbjct: 172 FSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPP+ P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLKG-RTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GVAAGRFHTVLWTREAVYTLGLNGGQLG 315
>gi|196006541|ref|XP_002113137.1| hypothetical protein TRIADDRAFT_57002 [Trichoplax adhaerens]
gi|190585178|gb|EDV25247.1| hypothetical protein TRIADDRAFT_57002 [Trichoplax adhaerens]
Length = 461
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 123/213 (57%), Gaps = 14/213 (6%)
Query: 5 DNEEMRPIDHLIRDRKIDVSSNQFN---EVYIWGTNANYNLGTGSQQTRDVPELL----- 56
D E + P+D ++ DRK S + V+ WG N N+ LG R +P +
Sbjct: 109 DREGLTPLDMVLIDRKQTFPSLHLSPPAHVFTWGLNDNFTLGHAESNCR-LPGRVKFITA 167
Query: 57 -DSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKD 115
+ K SIKQ+ M +FHSVF+S DGRV++CGHGQGGRLG+ E + + +++
Sbjct: 168 SQAAKTISIKQIVMCQFHSVFLSHDGRVFTCGHGQGGRLGIADEETTLRASEIS---SIT 224
Query: 116 KLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
+ +A + ++DH+V L G+V+ G+N++HQLG P P + P I L ++ +
Sbjct: 225 GIKIAQIAAARDHTVLLTDKGAVYTFGMNNYHQLGQVPSPKRCLKPKQISSKHLH-NKVM 283
Query: 176 IGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPV 208
IG+ G +H+V++++ E+YT G + GQ+GH+ +
Sbjct: 284 IGIAAGTYHTVMHTNEELYTCGTNYGQIGHAAM 316
>gi|195150085|ref|XP_002015985.1| GL11351 [Drosophila persimilis]
gi|194109832|gb|EDW31875.1| GL11351 [Drosophila persimilis]
Length = 1185
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 120/211 (56%), Gaps = 2/211 (0%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK 60
+ ++D + P+ + R D ++ N+V +WG+N NYNLG G++Q + P+ +D +
Sbjct: 117 LELLDEDTRCPLQAICRKCDEDFTTESQNDVLVWGSNKNYNLGIGNEQNTNAPQAVDFFR 176
Query: 61 RASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
+++I +QV + +HS+F G +++ GHG+GGRLG+G E+S+ +PK++ +
Sbjct: 177 KSNIWIEQVALGAYHSLFCDKKGHLYAVGHGKGGRLGIGVENSLPAPKRVKVSSKLNDDS 236
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
+ S+S+ HS+ L VF CG+N+ HQLG+ P ++ + K + L+ V
Sbjct: 237 IMCISVSRQHSLLLTRRSLVFACGINTDHQLGVRDAPENLTQFREVVALRDKGASDLLRV 296
Query: 179 CCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
HS+ YS++ VY +G + GQ G S T
Sbjct: 297 IACDQHSIAYSTKCVYVWGANQGQFGISRTT 327
>gi|198456847|ref|XP_001360463.2| GA20796 [Drosophila pseudoobscura pseudoobscura]
gi|198135774|gb|EAL25038.2| GA20796 [Drosophila pseudoobscura pseudoobscura]
Length = 1185
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 120/211 (56%), Gaps = 2/211 (0%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK 60
+ ++D + P+ + R D ++ N+V +WG+N NYNLG G++Q + P+ +D +
Sbjct: 117 LELLDEDTRCPLQAICRKCDEDFTTESQNDVLVWGSNKNYNLGIGNEQNTNAPQAVDFFR 176
Query: 61 RASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
+++I +QV + +HS+F G +++ GHG+GGRLG+G E+S+ +PK++ +
Sbjct: 177 KSNIWIEQVALGAYHSLFCDKKGHLYAVGHGKGGRLGIGVENSLPAPKRVKVSSKLNDDS 236
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
+ S+S+ HS+ L VF CG+N+ HQLG+ P ++ + K + L+ V
Sbjct: 237 IMCISVSRQHSLLLTRRSLVFACGINTDHQLGVRDAPENLTQFREVVALRDKGASDLLRV 296
Query: 179 CCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
HS+ YS++ VY +G + GQ G S T
Sbjct: 297 IACDQHSIAYSTKCVYVWGANQGQFGISRTT 327
>gi|242007258|ref|XP_002424459.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212507859|gb|EEB11721.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 987
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 140/256 (54%), Gaps = 26/256 (10%)
Query: 5 DNEEMRPIDHLIRDRKI----DVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL- 59
D +++ P+DH+++D++ + SSN E+Y+WGTN ++NLG G ++ VP L +
Sbjct: 126 DLDDLTPLDHVMKDKQSITYNNTSSNPSYEIYVWGTNTSFNLGIGHNNSKPVPTPLGTFF 185
Query: 60 -KRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
K SIKQVCM KFHS+F+ +DG+VW CG GRLGLG ES+ + P L +
Sbjct: 186 KKNISIKQVCMSKFHSLFLEEDGKVWVCGLNSRGRLGLGDESTSLVPTILKVGNRANNPC 245
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ SI +HS+ LM + SV+ GLN QLG P + SP I +LK + +IG+
Sbjct: 246 KSI-SIGLNHSLLLMENHSVWSFGLNDHQQLGHDPSFKEVPSPKLI--DTLKGIK-IIGI 301
Query: 179 CCGRFHSVVYSSREVYTFGIHAGQLG----HSPVTVSSASVIEPKVQATIIREDLPGFIF 234
+ +S+ +S +Y G + GQLG + P PK+ +D P +
Sbjct: 302 SASKCYSIFWSKYMLYACGSNTGQLGDLKSNEPF---------PKLLKKFGVQDPPSSV- 351
Query: 235 ESNRGTK--HSFTAET 248
ESNR + H FT +T
Sbjct: 352 ESNRRKEILHLFTIKT 367
>gi|338710818|ref|XP_003362425.1| PREDICTED: inhibitor of Bruton tyrosine kinase isoform 3 [Equus
caballus]
Length = 1152
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 125/209 (59%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLTALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGLGGRLGHGDEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P + LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIVPPPSSCNVPRQMQAKYLK-GRTVI 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLGY 316
>gi|194216217|ref|XP_001914988.1| PREDICTED: inhibitor of Bruton tyrosine kinase isoform 1 [Equus
caballus]
Length = 1352
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 125/209 (59%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLTALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGLGGRLGHGDEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P + LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIVPPPSSCNVPRQMQAKYLK-GRTVI 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLGY 316
>gi|338710816|ref|XP_003362424.1| PREDICTED: inhibitor of Bruton tyrosine kinase isoform 2 [Equus
caballus]
Length = 1337
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 125/209 (59%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLTALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGLGGRLGHGDEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P + LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIVPPPSSCNVPRQMQAKYLK-GRTVI 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLGY 316
>gi|195488229|ref|XP_002092226.1| GE14071 [Drosophila yakuba]
gi|194178327|gb|EDW91938.1| GE14071 [Drosophila yakuba]
Length = 1189
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 126/223 (56%), Gaps = 6/223 (2%)
Query: 1 MTVMDNEEMRPIDHLIRD-RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL 59
+ ++D + P+ + R D++++ N+V +WG+N NYNLG G++Q + P+ +D
Sbjct: 117 LELLDEDTRCPLQAICRKCDDDDLATDSQNDVLVWGSNKNYNLGIGNEQNTNTPQAVDFF 176
Query: 60 KRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL 117
+++++ +QV + +HS+F G +++ GHG+GGRLG+G E+S+ +PK++
Sbjct: 177 RKSNLWLEQVALGAYHSLFCDKKGHLYAVGHGKGGRLGIGVENSLPAPKRVKVSSKLSSD 236
Query: 118 GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG 177
+ S+S+ HS+ L VF CGLN+ HQLG+ H+ + K + L+
Sbjct: 237 SIQCISVSRQHSLVLTHHSLVFACGLNTDHQLGVRDAAEHLTQFKEVVALRDKGASDLVR 296
Query: 178 VCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKV 220
V HS+ Y SR VY +G + GQ G ++ ++ S++ P +
Sbjct: 297 VIACDQHSIAYGSRCVYVWGANQGQFG---ISANTPSIMVPTL 336
>gi|194882541|ref|XP_001975369.1| GG22276 [Drosophila erecta]
gi|190658556|gb|EDV55769.1| GG22276 [Drosophila erecta]
Length = 1189
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 126/223 (56%), Gaps = 6/223 (2%)
Query: 1 MTVMDNEEMRPIDHLIRD-RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL 59
+ ++D + P+ + R D++++ N+V +WG+N NYNLG G++Q + P+ +D
Sbjct: 117 LELLDEDTRCPLQAICRKCDDDDLATDSQNDVLVWGSNKNYNLGIGNEQNTNTPQAVDFF 176
Query: 60 KRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL 117
+++++ +QV + +HS+F G +++ GHG+GGRLG+G E+S+ +PK++
Sbjct: 177 RKSNLWLEQVALGAYHSLFCDKKGHLYAVGHGKGGRLGIGVENSLPAPKRVKVSSKLSGD 236
Query: 118 GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG 177
+ S+S+ HS+ L VF CGLN+ HQLG+ H+ + K + L+
Sbjct: 237 SIQCISVSRQHSLVLTHHSLVFACGLNTDHQLGVRDAAEHLTQFKEVVALRDKGASDLVR 296
Query: 178 VCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKV 220
V HS+ Y SR VY +G + GQ G ++ ++ S++ P +
Sbjct: 297 VIACDQHSIAYGSRCVYVWGANQGQFG---ISANTPSIMVPTL 336
>gi|195426626|ref|XP_002061413.1| GK20738 [Drosophila willistoni]
gi|194157498|gb|EDW72399.1| GK20738 [Drosophila willistoni]
Length = 1187
Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats.
Identities = 74/233 (31%), Positives = 127/233 (54%), Gaps = 7/233 (3%)
Query: 1 MTVMDNEEMRPIDHLIR---DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTR-DVPELL 56
+ ++D P+ + R D ++N N++ +WG+N NYNLG G++Q+ P+ +
Sbjct: 117 LDLLDENTQCPLQSICRNCDDLNFARNTNTQNDILVWGSNKNYNLGLGTEQSSTSAPQAV 176
Query: 57 DSLKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
D ++A+I ++V + +HS+F+ G +++ GHG+GGRLG G+E+S+ +PK++
Sbjct: 177 DFFRKANIWIEKVALGAYHSLFLDKKGHLYAVGHGKGGRLGNGNENSLPAPKRVKLPSKI 236
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQP 174
+ S S+ HS+ L VF CG+N+ HQLG+ P + + K +
Sbjct: 237 QDDSIICISTSRQHSLVLTQRSMVFACGINTDHQLGVRDAPEQLNQFKEVVSLRDKGASD 296
Query: 175 LIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQA-TIIR 226
L+ V HS+ YSS+ VY +G + GQ G P S ++ K+ A T+IR
Sbjct: 297 LLKVIACDQHSIAYSSKCVYVWGANQGQFGLGPNQQSIVVPVQMKLPAKTVIR 349
>gi|195029373|ref|XP_001987548.1| GH21979 [Drosophila grimshawi]
gi|193903548|gb|EDW02415.1| GH21979 [Drosophila grimshawi]
Length = 1194
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 134/249 (53%), Gaps = 7/249 (2%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK 60
+ ++D + P+ + R +D SS+ NE +WG+N NYNLG G++Q + P+ +D +
Sbjct: 117 LELLDEDTRCPLQAICRKCDLDPSSDSQNETLVWGSNKNYNLGIGNEQNTNAPQAVDFFR 176
Query: 61 RASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
+++I + V + +HS+F G +++ GHG+GGRLG+G E+S+ +PK++ +
Sbjct: 177 KSNIWIEHVALGAYHSLFCDKKGHLYAVGHGKGGRLGIGVENSLPAPKRVKVPLKQSDER 236
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
+ S+S+ HS+ L VF CG+N QLG+ + + + K++ L+ V
Sbjct: 237 IICISVSRQHSLVLTNRSLVFACGVNDNQQLGVRDAGEQLTTFKEVVSLRDKNATGLLRV 296
Query: 179 CCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNR 238
HS+ YSS+ +Y +G + GQ G ++ ++ +++ P Q + F+ E+N
Sbjct: 297 IACDQHSIAYSSKCIYVWGANQGQFG---ISANTKTIVSP-TQMKLAERTHIRFV-EANN 351
Query: 239 GTKHSFTAE 247
+T E
Sbjct: 352 AATVVYTEE 360
>gi|16769858|gb|AAL29148.1| SD05384p [Drosophila melanogaster]
Length = 1189
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 127/229 (55%), Gaps = 5/229 (2%)
Query: 1 MTVMDNEEMRPIDHLIRD-RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL 59
+ ++D + P+ + R D++++ N+V +WG+N NYNLG G++Q + P+ +D
Sbjct: 117 LELLDEDTRCPLQAICRKCDDDDLATDSQNDVLVWGSNKNYNLGIGNEQNTNTPQAVDFF 176
Query: 60 KRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL 117
+++++ +QV + +HS+F G +++ GHG+GGRLG+G E+S+ +PK++
Sbjct: 177 RKSNLWLEQVALGAYHSLFCDKKGHLYAVGHGKGGRLGIGLENSLPAPKRVKVSSKLSGD 236
Query: 118 GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG 177
+ S+S+ HS+ L VF CGLN+ HQLG+ + + K + L+
Sbjct: 237 SIQCISVSRQHSLVLTHHSLVFACGLNTDHQLGVRDAAEQLTQFKEVVALRDKGASDLVR 296
Query: 178 VCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT--VSSASVIEPKVQATI 224
V HS+ Y SR VY +G + GQ G S T ++ ++I+ + TI
Sbjct: 297 VIACDQHSIAYGSRCVYVWGANQGQFGISSNTPSITVPTLIKLPAKTTI 345
>gi|24654120|ref|NP_611117.2| CG8060 [Drosophila melanogaster]
gi|21627122|gb|AAF58015.2| CG8060 [Drosophila melanogaster]
Length = 1189
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 127/229 (55%), Gaps = 5/229 (2%)
Query: 1 MTVMDNEEMRPIDHLIRD-RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL 59
+ ++D + P+ + R D++++ N+V +WG+N NYNLG G++Q + P+ +D
Sbjct: 117 LELLDEDTRCPLQAICRKCDDDDLATDSQNDVLVWGSNKNYNLGIGNEQNTNTPQAVDFF 176
Query: 60 KRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL 117
+++++ +QV + +HS+F G +++ GHG+GGRLG+G E+S+ +PK++
Sbjct: 177 RKSNLWLEQVALGAYHSLFCDKKGHLYAVGHGKGGRLGIGLENSLPAPKRVKVSSKLSGD 236
Query: 118 GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG 177
+ S+S+ HS+ L VF CGLN+ HQLG+ + + K + L+
Sbjct: 237 SIQCISVSRQHSLVLTHQSLVFACGLNTDHQLGVRDAAEQLTQFKEVVALRDKGASDLVR 296
Query: 178 VCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT--VSSASVIEPKVQATI 224
V HS+ Y SR VY +G + GQ G + T ++ ++I+ + TI
Sbjct: 297 VIACDQHSIAYGSRCVYVWGANQGQFGINSNTPSITVPTLIKLPAKTTI 345
>gi|195334901|ref|XP_002034115.1| GM20065 [Drosophila sechellia]
gi|194126085|gb|EDW48128.1| GM20065 [Drosophila sechellia]
Length = 1189
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 126/229 (55%), Gaps = 5/229 (2%)
Query: 1 MTVMDNEEMRPIDHLIRD-RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL 59
+ ++D + P+ + R D++++ N+V +WG+N NYNLG G++Q + P+ +D
Sbjct: 117 LELLDEDTRCPLQAICRKCDDDDLATDSQNDVLVWGSNKNYNLGIGNEQNTNTPQAVDFF 176
Query: 60 KRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL 117
+++ + +QV + +HS+F G +++ GHG+GGRLG+G E+S+ +PK++
Sbjct: 177 RKSILWLEQVALGAYHSLFCDKKGHLYAVGHGKGGRLGIGVENSLPAPKRVKVSSKLSGD 236
Query: 118 GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG 177
+ S+S+ HS+ L VF CGLN+ HQLG+ + + K + L+
Sbjct: 237 SIQCISVSRQHSLVLTHHSLVFACGLNTDHQLGVRDAAEQLTQFKEVVALRDKGASDLVR 296
Query: 178 VCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT--VSSASVIEPKVQATI 224
V HS+ Y SR VY +G + GQ G S T ++ ++I+ + TI
Sbjct: 297 VIACDQHSIAYGSRCVYVWGANQGQFGISSNTPSITVPTLIKLPAKTTI 345
>gi|443693166|gb|ELT94596.1| hypothetical protein CAPTEDRAFT_128118, partial [Capitella teleta]
Length = 932
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 136/237 (57%), Gaps = 12/237 (5%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQ--FNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+T+ D E D + DR V+ + EVY WG NAN+ LG +Q + PE ++
Sbjct: 113 LTLRDKEGFTAFDVAMSDRLPHVTFEKSGLQEVYTWGDNANFTLGHEKEQRKKHPERIEY 172
Query: 59 LKR--ASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R SIKQV M K+HSV++S G V++CGHG+GGRLG G+E ++++PK + K ++
Sbjct: 173 FGRHGISIKQVLMCKYHSVYLSTAGHVYTCGHGRGGRLGHGNEQTILAPKLIEAVKQEEC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS----LKSS 172
+ + S S DH+V LM SG VF CGLN++ QLG S + ++P + S L
Sbjct: 233 I---LVSASNDHTVMLMQSGKVFSCGLNAYSQLGHSTSGA-CLTPKMVRMKSNSSPLLKG 288
Query: 173 QPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
+IGV +FH+V+Y+ V+TFG++AGQLG + V +P++ A D+
Sbjct: 289 HQIIGVIARKFHTVLYTQEAVFTFGLNAGQLGKIYNVLGEEIVSQPRLVAAFNHPDI 345
>gi|391327382|ref|XP_003738180.1| PREDICTED: inhibitor of Bruton tyrosine kinase-like [Metaseiulus
occidentalis]
Length = 909
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 129/232 (55%), Gaps = 13/232 (5%)
Query: 5 DNEEMRPIDHLIRDRKIDVSSNQFN--EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRA 62
D+E + P+D L+RDR N +++WG + N +LG GS P+ +
Sbjct: 136 DHEGLTPLDILVRDRVPWAKYLPTNPCSLHVWGEDENLSLGLGSTSVASTPKTHPRFPLS 195
Query: 63 S-IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKL-NFEKDKDKLGVA 120
S I+ + +++FHS F++ V+ GHG GGRLG G ++ P+++ F + K +
Sbjct: 196 SGIQDIVIERFHSAFLTKQATVFVSGHGPGGRLGTGDGKDLMVPEEVPTFRRVNTK--IV 253
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI-PRSSLKS-SQPLIGV 178
+ QDH++FL G+VF CG N +HQLG S P ++ P + P++ L + + + GV
Sbjct: 254 QVAAGQDHTIFLDSEGNVFTCGSNKYHQLGFSARPEKLLEPQLLNPKAFLLNILESIQGV 313
Query: 179 CCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDLP 230
G++HS +Y+ R +YT+G++AGQLGH P +V+ KV A DLP
Sbjct: 314 GAGKYHSALYTERALYTWGLNAGQLGH-PKYGERFTVLPRKVSAI----DLP 360
>gi|195119590|ref|XP_002004313.1| GI19681 [Drosophila mojavensis]
gi|193909381|gb|EDW08248.1| GI19681 [Drosophila mojavensis]
Length = 1188
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 133/252 (52%), Gaps = 13/252 (5%)
Query: 1 MTVMDNEEMRPIDHLIR--DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ V+D + P+ + R D++ V S NE +WG+N NYNLG G++Q P+ LD
Sbjct: 117 LEVLDEDTRCPLQAICRKCDQEQQVESQ--NEALVWGSNRNYNLGIGNEQNTLTPQSLDF 174
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
+++++ +QV + FHS+F+ G +++ GHG+GGRLG+G E+S+ +PK++ ++
Sbjct: 175 FRKSNLWLEQVALGPFHSLFLDKRGHLYAVGHGKGGRLGIGVENSLPAPKRVKVPLKHNE 234
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
+ S+S+ HS+ L VF CGLN QLG+ ++ + + K + L+
Sbjct: 235 ELIIGISVSRQHSLLLTNRSLVFACGLNDQQQLGVRDAGDYLTTFKEVVALRDKGASQLL 294
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT-VSSASVIEPKVQATIIREDLPGFIFE 235
V HS+ YS++ VY +G + GQ G S T + +A + T IR E
Sbjct: 295 RVIACDQHSIAYSAKAVYVWGANQGQFGISANTKIIAAPTLLKLADRTCIR------FVE 348
Query: 236 SNRGTKHSFTAE 247
+N +T E
Sbjct: 349 ANNAATVVYTEE 360
>gi|260818232|ref|XP_002604287.1| hypothetical protein BRAFLDRAFT_59895 [Branchiostoma floridae]
gi|229289613|gb|EEN60298.1| hypothetical protein BRAFLDRAFT_59895 [Branchiostoma floridae]
Length = 1227
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 123/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRD--RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ D E++ P+D + RD ++ + + Y WGTN N+ LG GSQQ+R PE ++
Sbjct: 113 LQAQDKEDLTPLDLIRRDLPAYVEFRTTDPADAYNWGTNTNFTLGHGSQQSRQHPEPVEH 172
Query: 59 LKR--ASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
L + S+ QV M KFH+VF+S GRV++CGHG+GGRLG GSE + + P + +
Sbjct: 173 LFKEGVSVAQVVMCKFHTVFLSHSGRVYTCGHGRGGRLGHGSEQTYMVPTLVEGLASQTC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
+ +A A +DH+V L +VF GLN HQLG+ P P +P + L++ +
Sbjct: 233 IQIAAA---RDHTVVLTDENTVFSFGLNYCHQLGVQPAPKFSTTPRQVAPKYLRNKH-IK 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++AG LG
Sbjct: 289 GVAAGRFHTVLWTDDAVYTCGLNAGHLG 316
>gi|449663190|ref|XP_002158415.2| PREDICTED: inhibitor of Bruton tyrosine kinase-like [Hydra
magnipapillata]
Length = 796
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 110/198 (55%), Gaps = 9/198 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N N+NLG + R P+ + L I V + KFH+VF+S G+V++CGHG
Sbjct: 212 VFTWGNNINFNLGQADSKNRVHPDQVQDL--VDIIDVVITKFHAVFLSKAGQVFTCGHGL 269
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG SE +V+ PK + K++ + + H+V L V+ G N + QLG
Sbjct: 270 NGRLGHNSEETVLHPKLIEGLKNQKCINIKAGD---HHTVVLDELKQVYTFGSNQYCQLG 326
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTV 210
P P + P + K+ + +IG+ FH++VY+S E+YTFG++AGQLGHS
Sbjct: 327 HVPQPKSCLYPKELSNKLFKNKE-IIGIAAACFHTIVYTSYELYTFGLNAGQLGHSKGEK 385
Query: 211 SSASVIEPKVQATIIRED 228
S PK+ ++++ ++
Sbjct: 386 YQCS---PKLVSSLLNKE 400
>gi|170048960|ref|XP_001853623.1| inhibitor of Bruton tyrosine kinase [Culex quinquefasciatus]
gi|167870936|gb|EDS34319.1| inhibitor of Bruton tyrosine kinase [Culex quinquefasciatus]
Length = 1206
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 109/198 (55%), Gaps = 6/198 (3%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLK--RASIKQVCMDKFHSVFVSDDGRVWSC 86
+E+ +WG N NYNLG G+ + +D P+ +D + R SI+++ ++ +HSVF+ DG V++
Sbjct: 145 HEIMVWGKNRNYNLGVGNVEGKDTPDFIDFFRKNRISIERMSINAYHSVFLGRDGEVYAT 204
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
GHG GGRLG GSE +VV P ++ + + + S + H++ L S ++ CG N+
Sbjct: 205 GHGMGGRLGNGSEHTVVHPIRIAVQTRGAEERIVDVSTGKHHTLLLSSSNCIYACGDNNH 264
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG-- 204
QLG+ PPP ++ I + + + + FHS+ +V+ +G++ GQ G
Sbjct: 265 CQLGIKPPPEKQLTFKEIGGLHNFADKKIKRIIAKDFHSIAVCDEDVFVWGLNVGQFGMK 324
Query: 205 --HSPVTVSSASVIEPKV 220
+PV A + P V
Sbjct: 325 KEQNPVLTPKAISLLPDV 342
>gi|156357352|ref|XP_001624184.1| predicted protein [Nematostella vectensis]
gi|156210944|gb|EDO32084.1| predicted protein [Nematostella vectensis]
Length = 571
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 118/207 (57%), Gaps = 17/207 (8%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFNE--VYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ D E++ P+D L+ D +SS +E +Y WG+N N+ LG + R PEL
Sbjct: 108 LYACDKEDLSPLDILMLDSPYKMSSADDHETQLYTWGSNTNFTLGHRDENMRQHPEL--- 164
Query: 59 LKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
V M KFHS F++ DG+V +CGHG+GGRLG G E + ++P L+ D +
Sbjct: 165 --------VAMCKFHSAFLTGDGKVLTCGHGRGGRLGHGDEKTQLAPCMLSGIGDDKCIS 216
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
+A A QDH++ +M SG VF GLN+ HQLG SPP + P + K Q +IGV
Sbjct: 217 IAAA---QDHTLLVMESGVVFSFGLNNMHQLGHSPPSMQSLVPKMVQARVWKGKQ-VIGV 272
Query: 179 CCGRFHSVVYSSREVYTFGIHAGQLGH 205
G++HS Y+ E++T G++ GQLGH
Sbjct: 273 AAGKYHSAFYTHTELFTCGLNIGQLGH 299
>gi|198434084|ref|XP_002122261.1| PREDICTED: similar to rCG25208 [Ciona intestinalis]
Length = 1329
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 121/209 (57%), Gaps = 13/209 (6%)
Query: 22 DVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD--SLKRASIKQVCMDKFHSVFVSD 79
D+ ++ +E+Y WG N N L Q+++ +PE++ S + IKQV M KFHS+FV+
Sbjct: 158 DLKNSDVSELYTWGVNENMTLAQAVQKSKKMPEMVKFFSKRNIYIKQVVMCKFHSIFVTR 217
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
DG +SCG+G+GGRLG G+E + P+ + D + AS + DHSVF+ G +
Sbjct: 218 DGVAYSCGNGRGGRLGNGAEDVFIDPQLV----DAGGSVITSASAAVDHSVFVTADGQLL 273
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGI 198
CGLN LG++PPP + P R S ++G C G H+VV++S+ +YTFG
Sbjct: 274 TCGLNDHRTLGINPPPQKSLLPQ---RVSGLRDHIIVGCCAGSCHTVVWTSQSALYTFGT 330
Query: 199 HAGQLGHSPVTVSSASVIEPKVQATIIRE 227
+AGQLGH +++P+ +++ RE
Sbjct: 331 NAGQLGHGK---GQPFIVQPRQVSSVHRE 356
>gi|194757291|ref|XP_001960898.1| GF11270 [Drosophila ananassae]
gi|190622196|gb|EDV37720.1| GF11270 [Drosophila ananassae]
Length = 1192
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 130/227 (57%), Gaps = 13/227 (5%)
Query: 1 MTVMDNEEMRPIDHLIRDRKID-VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL 59
M ++D + P+ + R +D +++ N+V +WG+N NYNLG GS+Q + P+ +D
Sbjct: 118 MELLDEDTCCPLQAICRKCDVDDFATDSQNDVLVWGSNKNYNLGVGSEQNTNAPQSVDFF 177
Query: 60 KRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL 117
++++I +QV + +HS+F+ G +++ GHG+GGRLG G E+++ +PK++ K KL
Sbjct: 178 RKSNIWIEQVALGAYHSLFLDKKGHLYAVGHGKGGRLGTGGENTLPAPKRV---KVSSKL 234
Query: 118 G----VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQ 173
G + S+S+ HS+ L VF CGLNS QLG+ P H+ + K +
Sbjct: 235 GSEDSIRCISVSRQHSLVLTHRSLVFACGLNSDCQLGVRDAPEHLAQFKEVVALRDKGAS 294
Query: 174 PLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKV 220
L+ V HS+ Y SR VY +G + GQ G ++ + AS++ P +
Sbjct: 295 DLVRVIACDQHSIAYGSRCVYVWGANQGQFG---ISANIASIVVPTL 338
>gi|320170918|gb|EFW47817.1| hypothetical protein CAOG_05755 [Capsaspora owczarzaki ATCC 30864]
Length = 1635
Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 102/184 (55%), Gaps = 9/184 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS----LKRASIKQVCMDKFHSVFVSDDGRVWS 85
+V+ WG + NY LG + R+ P+ +D+ + RA I FHS F++D G V++
Sbjct: 306 DVFSWGLDRNYTLGHVGAEDRNHPDRVDAFVRMVPRARIVSAVTSSFHSAFLTDAGEVYT 365
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
CG G GGRLG + +V+ P+++ D A S+S+D+S + G VF G N
Sbjct: 366 CGFGLGGRLGHDCDDTVIVPRRVGGLLDGK--ACAAVSVSRDNSAVVTSKGEVFTFGSNE 423
Query: 146 FHQLGLS--PPPSHIVSPTPIPRSSLKSSQ-PLIGVCCGRFHSVVYSSREVYTFGIHAGQ 202
QLG++ P H P P +L+ + P+IGV CGR HS YS +E+YT G + GQ
Sbjct: 424 HGQLGVAGLPVGPHANCPKPQLVKALRERKVPIIGVACGRTHSAFYSEQELYTCGQNFGQ 483
Query: 203 LGHS 206
LGH+
Sbjct: 484 LGHA 487
>gi|440899583|gb|ELR50867.1| Inhibitor of Bruton tyrosine kinase, partial [Bos grunniens mutus]
Length = 1384
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 117/224 (52%), Gaps = 33/224 (14%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 138 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 197
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + L E
Sbjct: 198 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTC-----LVIEMSLYS 252
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP----PPSHIVSPTPIPRSSLK-- 170
LG M + + +F+ LS S GL + + LS P SH+ + R S
Sbjct: 253 LG--MVAFTHIFILFVWLSRS---SGLLRTYPVFLSEGRFVPQSHLA----MSRDSFSCY 303
Query: 171 ---------SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
+ +IGV GRFHSV+++ VYT G++ GQLG+
Sbjct: 304 NWGMQAKYLKGRTIIGVAAGRFHSVLWTREAVYTMGLNGGQLGY 347
>gi|157136100|ref|XP_001663653.1| hypothetical protein AaeL_AAEL013465 [Aedes aegypti]
gi|108870046|gb|EAT34271.1| AAEL013465-PA, partial [Aedes aegypti]
Length = 1043
Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats.
Identities = 56/178 (31%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLK--RASIKQVCMDKFHSVFVSDDGRVWSC 86
NE+ +WG N NYNLG G+ + RD P+ +D + R I ++ ++ +HSVF++ DG V++
Sbjct: 4 NEIVVWGKNKNYNLGIGNVEGRDTPDCIDYFRKYRIPIAKMSINAYHSVFLTKDGDVYAT 63
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
GHG+GGRLG G+E++V P ++ + + S + H++ L ++ CG N+
Sbjct: 64 GHGRGGRLGNGAENTVAFPIRIAVHTRSAEERIVDVSTGRHHTLLLSDHNCIYSCGENNH 123
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
QLG+ PPP ++ I + + + + +HS+ +V+ +G + GQ G
Sbjct: 124 CQLGIKPPPEKQLTFKEIGGLHNLADKRINRIIAKDYHSIAVCEADVFVWGQNGGQFG 181
>gi|157105639|ref|XP_001648958.1| hypothetical protein AaeL_AAEL014533 [Aedes aegypti]
gi|108868979|gb|EAT33204.1| AAEL014533-PA [Aedes aegypti]
Length = 1184
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLK--RASIKQVCMDKFHSVFVSDDGRVWSC 86
NE+ +WG N NYNLG G+ + RD P+ +D + R I ++ ++ +HSVF++ DG V++
Sbjct: 145 NEIVVWGKNKNYNLGIGNVEGRDTPDCIDYFRKHRIPIAKMSINAYHSVFLTKDGDVYAT 204
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
GHG+GGRLG G+E++V P ++ + + S + H++ L ++ CG N+
Sbjct: 205 GHGRGGRLGNGAENTVAFPIRIAVHTRSAEERIVDVSTGRHHTLLLSDHNCIYSCGENNH 264
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
QLG+ PPP ++ I + + + + +HS+ +V+ +G + GQ G
Sbjct: 265 CQLGIKPPPEKQLTFKEIGGLHNFADKRINRIIAKDYHSIAICEADVFVWGQNGGQFG 322
>gi|322780593|gb|EFZ09977.1| hypothetical protein SINV_12881 [Solenopsis invicta]
Length = 2000
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 56/58 (96%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI+REDLPGFIFESNRGTKHSFTAETSLGPEF GWTGK+GKRLRSK+EA+KQKV+
Sbjct: 245 QATILREDLPGFIFESNRGTKHSFTAETSLGPEFAAGWTGKRGKRLRSKIEAIKQKVK 302
>gi|307166390|gb|EFN60527.1| E3 ubiquitin-protein ligase HECTD1 [Camponotus floridanus]
Length = 2551
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 56/58 (96%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI+REDLPGFIFESNRGTKHSFTAETSLGPEF GWTGK+GKRLRSK+EA+KQKV+
Sbjct: 784 QATILREDLPGFIFESNRGTKHSFTAETSLGPEFAAGWTGKRGKRLRSKIEAIKQKVK 841
>gi|332025101|gb|EGI65282.1| E3 ubiquitin-protein ligase HECTD1 [Acromyrmex echinatior]
Length = 1838
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 56/58 (96%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI+REDLPGFIFESNRGTKHSFTAETSLGPEF GWTGK+GKRLRSK+EA+KQKV+
Sbjct: 74 QATILREDLPGFIFESNRGTKHSFTAETSLGPEFAAGWTGKRGKRLRSKIEAIKQKVK 131
>gi|158298930|ref|XP_319065.4| AGAP009939-PA [Anopheles gambiae str. PEST]
gi|157014124|gb|EAA14039.4| AGAP009939-PA [Anopheles gambiae str. PEST]
Length = 1224
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 102/179 (56%), Gaps = 4/179 (2%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLK--RASIKQVCMDKFHSVFVSDD-GRVWS 85
+E+ IWG N NYNLG G+ Q + PE ++ + R +I+++ + +HSVF++ G +++
Sbjct: 151 SELMIWGQNKNYNLGIGNAQDKGNPESMEYFRKTRTTIRKLEISSYHSVFLTHKMGELYA 210
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
GHG GGRLGLG E ++ P K+ +D + + ++ H++ L + ++ CG N
Sbjct: 211 AGHGVGGRLGLGMEDTIAYPMKVPVPL-RDNERITDIAAAKHHTLILTDNNHIYSCGENK 269
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
QLGL PPP +++S I S S + + V +HS+ ++Y +G++ GQ G
Sbjct: 270 HCQLGLKPPPGNLLSFKEITGHSSLSGKTIKRVIAMDYHSIAVLEADIYVWGLNGGQFG 328
>gi|242008012|ref|XP_002424807.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508345|gb|EEB12069.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 2686
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 56/58 (96%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI+REDLPGFIFESNRGTKHSFTAETSLGPEF GW+GKKGKRLRSK+EA+KQKV+
Sbjct: 787 QATILREDLPGFIFESNRGTKHSFTAETSLGPEFAAGWSGKKGKRLRSKIEAIKQKVK 844
>gi|345495040|ref|XP_003427422.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1-like [Nasonia
vitripennis]
Length = 2621
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 55/58 (94%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI+REDLPGFIFESNRGTKHSFTAETSLGPEF GW GK+GKRLRSK+EA+KQKV+
Sbjct: 811 QATILREDLPGFIFESNRGTKHSFTAETSLGPEFSAGWAGKRGKRLRSKMEAIKQKVK 868
>gi|345495042|ref|XP_003427423.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1-like [Nasonia
vitripennis]
Length = 2506
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 55/58 (94%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI+REDLPGFIFESNRGTKHSFTAETSLGPEF GW GK+GKRLRSK+EA+KQKV+
Sbjct: 811 QATILREDLPGFIFESNRGTKHSFTAETSLGPEFSAGWAGKRGKRLRSKMEAIKQKVK 868
>gi|345495044|ref|XP_001605880.2| PREDICTED: E3 ubiquitin-protein ligase HECTD1-like [Nasonia
vitripennis]
Length = 2608
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 55/58 (94%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI+REDLPGFIFESNRGTKHSFTAETSLGPEF GW GK+GKRLRSK+EA+KQKV+
Sbjct: 798 QATILREDLPGFIFESNRGTKHSFTAETSLGPEFSAGWAGKRGKRLRSKMEAIKQKVK 855
>gi|328787841|ref|XP_001122009.2| PREDICTED: e3 ubiquitin-protein ligase HECTD1-like [Apis mellifera]
Length = 2494
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 55/58 (94%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI+REDLPGFIFESNRGTKHSFTAETSLGPEF GW GK+GKRLRSK+EA+KQKV+
Sbjct: 781 QATILREDLPGFIFESNRGTKHSFTAETSLGPEFAAGWAGKRGKRLRSKIEAIKQKVK 838
>gi|350419570|ref|XP_003492229.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1-like [Bombus
impatiens]
Length = 2495
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 55/58 (94%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI+REDLPGFIFESNRGTKHSFTAETSLGPEF GW GK+GKRLRSK+EA+KQKV+
Sbjct: 781 QATILREDLPGFIFESNRGTKHSFTAETSLGPEFAAGWAGKRGKRLRSKIEAIKQKVK 838
>gi|340712868|ref|XP_003394975.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HECTD1-like [Bombus terrestris]
Length = 2541
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 55/58 (94%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI+REDLPGFIFESNRGTKHSFTAETSLGPEF GW GK+GKRLRSK+EA+KQKV+
Sbjct: 781 QATILREDLPGFIFESNRGTKHSFTAETSLGPEFAAGWAGKRGKRLRSKIEAIKQKVK 838
>gi|380021584|ref|XP_003694642.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HECTD1-like [Apis florea]
Length = 2537
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 55/58 (94%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI+REDLPGFIFESNRGTKHSFTAETSLGPEF GW GK+GKRLRSK+EA+KQKV+
Sbjct: 781 QATILREDLPGFIFESNRGTKHSFTAETSLGPEFAAGWAGKRGKRLRSKIEAIKQKVK 838
>gi|293361245|ref|XP_236481.5| PREDICTED: inhibitor of Bruton tyrosine kinase [Rattus norvegicus]
Length = 1252
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 99/165 (60%), Gaps = 7/165 (4%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD- 57
+ + D E + P+D L++DR V + EVY WG N N+ LG GSQ ++ PELLD
Sbjct: 112 LYMQDKEGLSPLDLLMKDRPAHVVFKNTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDL 171
Query: 58 -SLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
S R +KQV + KFHSVF+S G+V++CGHG+GGRLG G E + + P+ +
Sbjct: 172 FSRSRVYVKQVVLCKFHSVFLSQQGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHSC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSP 161
VA A +DH+V L G V+ GLN+FHQLG+ PPPS P
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNTFHQLGIIPPPSSCNVP 273
>gi|150951664|ref|XP_001388018.2| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|149388785|gb|EAZ63995.2| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 1448
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 34/232 (14%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELL---------------DSLKRASIKQVCMDKFHS 74
E+Y++G+N N LG G R VP L D+ ++ KQV + K HS
Sbjct: 191 EIYMFGSNNNNQLGVGDSTNRSVPSRLAHSAFKSKKEEITAQDTYRKPRYKQVALSKNHS 250
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSE--SSVVSPKKLNFEKDK-DKLGVAMASISQDHSVF 131
+ V+ DG ++SCG G GRLG G E ++ KK+ F D+ + V +IS +HS+
Sbjct: 251 LIVTRDGELFSCGIGSRGRLGHGFEDLNNYYRFKKVEFFSDEYETKHVKEVAISNNHSLV 310
Query: 132 LMLSGSVFVCGLNSFHQLGLSPP------------PSHIVSPTPIPRSSLKSSQPLIGVC 179
L V+ GLNSF QLG + +PT + K S+P+IG+
Sbjct: 311 LTSDNEVYSWGLNSFKQLGYESNNNANYNQKKGFLETFEANPTLVLGDLRKYSKPIIGIS 370
Query: 180 CGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDLPG 231
+ HSV YS E++ +G++ GQ+G +S S IE K+ T+ + ++ G
Sbjct: 371 VSKVHSVAYSKNELFFWGLNVGQMG----IPASDSNIEVKLHDTVFKGEIQG 418
>gi|291242909|ref|XP_002741375.1| PREDICTED: inhibin receptor E3 ligase-like protein [Saccoglossus
kowalevskii]
Length = 2528
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 56/58 (96%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI+RE+LPGFIFESNRGTKHSFTAETSLGPEF GW+GK+GKRLRSK+EAVKQKV+
Sbjct: 786 QATILREELPGFIFESNRGTKHSFTAETSLGPEFSTGWSGKRGKRLRSKIEAVKQKVK 843
>gi|383847577|ref|XP_003699429.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Megachile rotundata]
Length = 2534
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/58 (86%), Positives = 55/58 (94%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI+REDLPGFIFESNRGTKHSFTAETSLGPEF GW GK+GKRLRSK+EA+KQKV+
Sbjct: 781 QATILREDLPGFIFESNRGTKHSFTAETSLGPEFVSGWAGKRGKRLRSKIEAIKQKVK 838
>gi|326519524|dbj|BAK00135.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1067
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 129/252 (51%), Gaps = 24/252 (9%)
Query: 1 MTVMDNEEMRPIDHL---IRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD 57
+ + D + PID L + D + EV+ WG+ NY LGTG+ + +P +D
Sbjct: 121 LNLEDTKGRTPIDLLSGPVSQANGDSPHSVATEVFSWGSGTNYQLGTGNAHIQKLPCKVD 180
Query: 58 SLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLG-----LGSESSVVSPKKLNFEK 112
+L + IK V KFHSV VS DG +++ G G+GGRLG G ++V++P+++
Sbjct: 181 ALHGSYIKTVAASKFHSVAVSSDGELYTWGFGRGGRLGHPDIRSGQTTAVITPRQVTVGL 240
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
+ K+ V A ++ H+V +G +F G N QLG PS PTP SSLK
Sbjct: 241 GRKKVNVVAA--AKHHTVIATSAGELFTWGSNREGQLGY---PSVDTQPTPRRVSSLK-- 293
Query: 173 QPLIGVCCGRFHS-VVYSSREVYTFGIH-AGQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q +I V HS V + EV+T+G + GQLG+ T +SAS P+ + E L
Sbjct: 294 QRIIAVAAANKHSAAVADTGEVFTWGSNKEGQLGYG--TSNSASNCIPR-----MVEYLK 346
Query: 231 GFIFESNRGTKH 242
G +F+ K+
Sbjct: 347 GKVFKGVSAAKY 358
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG+N LG G+ + +P +++ LK K V K+H++ DG V++ G
Sbjct: 314 EVFTWGSNKEGQLGYGTSNSASNCIPRMVEYLKGKVFKGVSAAKYHTLVFGADGEVFTWG 373
Query: 88 H 88
H
Sbjct: 374 H 374
>gi|189236840|ref|XP_001813187.1| PREDICTED: similar to hect E3 ubiquitin ligase [Tribolium
castaneum]
Length = 2609
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 51/58 (87%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
Q TI+REDLPGFIFESNRGTKHSFTAETSLGPEF GWT KKGKRLRSK EA K KV+
Sbjct: 789 QTTILREDLPGFIFESNRGTKHSFTAETSLGPEFSAGWTNKKGKRLRSKTEATKIKVK 846
>gi|270005044|gb|EFA01492.1| hypothetical protein TcasGA2_TC007046 [Tribolium castaneum]
Length = 2552
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 51/58 (87%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
Q TI+REDLPGFIFESNRGTKHSFTAETSLGPEF GWT KKGKRLRSK EA K KV+
Sbjct: 799 QTTILREDLPGFIFESNRGTKHSFTAETSLGPEFSAGWTNKKGKRLRSKTEATKIKVK 856
>gi|22202769|dbj|BAC07425.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|125557351|gb|EAZ02887.1| hypothetical protein OsI_25020 [Oryza sativa Indica Group]
gi|125599227|gb|EAZ38803.1| hypothetical protein OsJ_23206 [Oryza sativa Japonica Group]
Length = 1073
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 133/267 (49%), Gaps = 24/267 (8%)
Query: 1 MTVMDNEEMRPIDHL---IRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD 57
+ + D + P+D L + D + EV+ WG+ NY LGTG+ + +P +D
Sbjct: 121 LALEDTKGRTPVDLLSGPVSQANGDSPDSVAMEVFSWGSGTNYQLGTGNAHIQKLPCKVD 180
Query: 58 SLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLG-----LGSESSVVSPKKLNFEK 112
+L + IK V KFHSV VS DG +++ G G+GGRLG G ++V++P+++
Sbjct: 181 ALHGSYIKTVAASKFHSVAVSSDGELYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGL 240
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
+ ++ V A ++ H+V +G +F G N QLG PS PTP SSLK+
Sbjct: 241 GRKRVNVVAA--AKHHTVIATEAGELFTWGSNREGQLGY---PSVDTQPTPRRVSSLKAR 295
Query: 173 QPLIGVCCGRFHS-VVYSSREVYTFGIH-AGQLGHSPVTVSSASVIEPKVQATIIREDLP 230
+I V HS V + EV+T+G + GQLG+ T +SAS P+ + E L
Sbjct: 296 --IISVAAANKHSAAVADTGEVFTWGSNKEGQLGYG--TSNSASNCIPR-----MVEYLK 346
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
G F+ K+ A + G F G
Sbjct: 347 GKAFKCVSAAKYHTVALGTDGEVFTWG 373
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG+N LG G+ + +P +++ LK + K V K+H+V + DG V++ G
Sbjct: 314 EVFTWGSNKEGQLGYGTSNSASNCIPRMVEYLKGKAFKCVSAAKYHTVALGTDGEVFTWG 373
Query: 88 H 88
H
Sbjct: 374 H 374
>gi|242047524|ref|XP_002461508.1| hypothetical protein SORBIDRAFT_02g003750 [Sorghum bicolor]
gi|241924885|gb|EER98029.1| hypothetical protein SORBIDRAFT_02g003750 [Sorghum bicolor]
Length = 1049
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 117/221 (52%), Gaps = 21/221 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V+ WG+ NY LGTG+ + +P +D+L + IK V KFHSV VS DG +++ G
Sbjct: 130 TDVFTWGSATNYQLGTGNAHIQKLPCKVDTLHGSYIKTVAASKFHSVAVSYDGELYTWGF 189
Query: 89 GQGGRLG-----LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
G+GGRLG G ++V++P+++ + ++ V A ++ H+V +G +F G
Sbjct: 190 GRGGRLGHPDIQSGQTTAVITPRQVTVGLGRKRVNVVAA--AKHHTVIATETGELFTWGS 247
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIH-AG 201
N QLG PS PTP SSLK Q +I V HS V + EV+T+G + G
Sbjct: 248 NREGQLGY---PSVDTQPTPRRVSSLK--QRIISVAAANKHSAAVADTGEVFTWGCNKEG 302
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKH 242
QLG+ T +SAS P+ + E L G +F K+
Sbjct: 303 QLGYG--TSNSASNCMPR-----MVEYLKGKVFRGVSAAKY 336
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V + + E++ WG+N LG S T+ P + SLK+ I +K HS V+D G
Sbjct: 234 VIATETGELFTWGSNREGQLGYPSVDTQPTPRRVSSLKQRIISVAAANK-HSAAVADTGE 292
Query: 83 VWSCGHGQGGRLGLGSESSVVS--PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
V++ G + G+LG G+ +S + P+ + + K K GV+ A H++ L + G VF
Sbjct: 293 VFTWGCNKEGQLGYGTSNSASNCMPRMVEYLKGKVFRGVSAAKY---HTIVLGVDGEVFS 349
Query: 141 CG 142
G
Sbjct: 350 WG 351
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 29/126 (23%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G+ + +P +++ LK + V K+H++ + DG V+S G
Sbjct: 292 EVFTWGCNKEGQLGYGTSNSASNCMPRMVEYLKGKVFRGVSAAKYHTIVLGVDGEVFSWG 351
Query: 88 HGQGGRLGLGSESSVVSPKK--------------LNFEKDKDKLGVAMASISQDHSVFLM 133
H +V+P++ L F + ++L V + HS L
Sbjct: 352 H------------RLVTPRRVVVARCLKKGGNTNLKFHR-MERLQVISVAAGTTHSTALT 398
Query: 134 LSGSVF 139
G++F
Sbjct: 399 ADGALF 404
>gi|115470737|ref|NP_001058967.1| Os07g0165200 [Oryza sativa Japonica Group]
gi|113610503|dbj|BAF20881.1| Os07g0165200, partial [Oryza sativa Japonica Group]
Length = 754
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 133/267 (49%), Gaps = 24/267 (8%)
Query: 1 MTVMDNEEMRPIDHL---IRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD 57
+ + D + P+D L + D + EV+ WG+ NY LGTG+ + +P +D
Sbjct: 121 LALEDTKGRTPVDLLSGPVSQANGDSPDSVAMEVFSWGSGTNYQLGTGNAHIQKLPCKVD 180
Query: 58 SLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLG-----LGSESSVVSPKKLNFEK 112
+L + IK V KFHSV VS DG +++ G G+GGRLG G ++V++P+++
Sbjct: 181 ALHGSYIKTVAASKFHSVAVSSDGELYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGL 240
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
+ ++ V A ++ H+V +G +F G N QLG PS PTP SSLK+
Sbjct: 241 GRKRVNVVAA--AKHHTVIATEAGELFTWGSNREGQLGY---PSVDTQPTPRRVSSLKAR 295
Query: 173 QPLIGVCCGRFHS-VVYSSREVYTFGIH-AGQLGHSPVTVSSASVIEPKVQATIIREDLP 230
+I V HS V + EV+T+G + GQLG+ T +SAS P+ + E L
Sbjct: 296 --IISVAAANKHSAAVADTGEVFTWGSNKEGQLGYG--TSNSASNCIPR-----MVEYLK 346
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
G F+ K+ A + G F G
Sbjct: 347 GKAFKCVSAAKYHTVALGTDGEVFTWG 373
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG+N LG G+ + +P +++ LK + K V K+H+V + DG V++ G
Sbjct: 314 EVFTWGSNKEGQLGYGTSNSASNCIPRMVEYLKGKAFKCVSAAKYHTVALGTDGEVFTWG 373
Query: 88 H 88
H
Sbjct: 374 H 374
>gi|405969515|gb|EKC34483.1| Inhibitor of Bruton tyrosine kinase [Crassostrea gigas]
Length = 338
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 88/133 (66%), Gaps = 7/133 (5%)
Query: 5 DNEEMRPIDHLIRDRKIDVSSNQFN--EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRA 62
D+ + P+D ++DR VS ++ + +VY WG N N LG G +Q R PE++D ++
Sbjct: 117 DHLGLSPLDLAMKDRPPYVSYDKADLCDVYTWGDNINLTLGHGKEQRRGHPEVIDEFRKK 176
Query: 63 SI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
+I K+V + K+HSVF++ DG+V++CGHGQGGRLG G E + PK + E +D++ V
Sbjct: 177 AIQVKEVVLCKYHSVFLTVDGQVYTCGHGQGGRLGHGDEQTYTVPKLV--ETLRDQVCVQ 234
Query: 121 MASISQDHSVFLM 133
+ + S+DH+VFLM
Sbjct: 235 VVA-SRDHTVFLM 246
>gi|255569510|ref|XP_002525722.1| conserved hypothetical protein [Ricinus communis]
gi|223535022|gb|EEF36705.1| conserved hypothetical protein [Ricinus communis]
Length = 1050
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 123/236 (52%), Gaps = 31/236 (13%)
Query: 1 MTVMDNEEMRPIDHL---IRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD 57
+T+ D++ PID L + D + EV+ WG+ ANY LGTG+ + +P +D
Sbjct: 123 ITLEDSKSRTPIDLLSGPVLQAIGDGHDSVTTEVFSWGSGANYQLGTGNAHLQKLPCKVD 182
Query: 58 SLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLG------LGSESSVVSPKKLNFE 111
+L + IK V KFHS+ VS G V++ G G+GGRLG +++V++P++L
Sbjct: 183 ALHSSLIKLVSAAKFHSIAVSAHGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQLT-- 240
Query: 112 KDKDKLG---VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR-- 166
LG V + ++ H+V SG VF G N QLG + V P PR
Sbjct: 241 ---SGLGSRRVKAIAAAKHHTVLATESGEVFTWGSNREGQLG------YTVDTQPTPRRV 291
Query: 167 SSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLGHSPVTVSSASVIEPKV 220
SSLKS +I V H+ V S S EV+T+G + GQLG+ T +SAS P+V
Sbjct: 292 SSLKSR--IIAVAAANKHTAVVSDSGEVFTWGCNKEGQLGYG--TSNSASNYTPRV 343
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 27/125 (21%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G+ + P +++ LK + K V K+H++ + DG V++ G
Sbjct: 316 EVFTWGCNKEGQLGYGTSNSASNYTPRVVEYLKGKTFKGVAAAKYHTIVLGADGEVYTWG 375
Query: 88 HGQGGRLGLGSESSVVSPKKL----NFEKD---------KDKLGVAMASISQDHSVFLML 134
H +V+P+++ N +K ++L VA + HS+ L
Sbjct: 376 H------------RLVTPRRVVIARNLKKSGNSPLKFHRMERLHVASIAAGMVHSLALTD 423
Query: 135 SGSVF 139
G++F
Sbjct: 424 DGALF 428
>gi|307197829|gb|EFN78940.1| E3 ubiquitin-protein ligase HECTD1 [Harpegnathos saltator]
Length = 2600
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 56/74 (75%), Gaps = 16/74 (21%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSL----------------GPEFGGGWTGKKGK 264
QATI+REDLPGFIFESNRGTKHSFTAETSL GPEF GWTGK+GK
Sbjct: 813 QATILREDLPGFIFESNRGTKHSFTAETSLVNKSLELIESRDVYIIGPEFAAGWTGKRGK 872
Query: 265 RLRSKLEAVKQKVR 278
RLRSK+EA+KQKV+
Sbjct: 873 RLRSKIEAIKQKVK 886
>gi|356668403|gb|AET35421.1| ArbB [Syzygites megalocarpus]
Length = 1250
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 113/218 (51%), Gaps = 34/218 (15%)
Query: 16 IRDRKIDVSSNQFN------EVYIWGTNANYNLGTGSQQTRDVPE----LLDS------L 59
I+D +++ N+++ +VY WG N NY LG + R PE LDS +
Sbjct: 164 IQDIELNNLENKYDLPIVRTDVYTWGQNTNYVLGHSDSENRSRPERVHFYLDSQQNPAVM 223
Query: 60 KRAS--IKQVCMDKFHSVFVSDDGR--VWSCGHGQGGRLGLGSESSV-VSPKKLNFEKDK 114
KR + I+ V M K+H F++ + R + CG G+ GRLGLG E+ + P +++ +
Sbjct: 224 KRPAYIIETVSMAKYHMTFLTSESRNNLLICGFGRNGRLGLGKETETQLVPTAISWPE-- 281
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVS-------PTPIPRS 167
+ ++ +DH++ L SG V G N + QLG S + P I
Sbjct: 282 ---RIISVALGRDHTIALTESGVVISFGNNEYGQLGHEIEDSKKKNEGSFQHKPKKIQAQ 338
Query: 168 SLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
LK QP+IGV R HSVVY++ +++TFG++ GQLG+
Sbjct: 339 ILKK-QPIIGVAASRIHSVVYTNSDIFTFGLNQGQLGY 375
>gi|357111495|ref|XP_003557548.1| PREDICTED: uncharacterized protein LOC100828625 [Brachypodium
distachyon]
Length = 1078
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 120/230 (52%), Gaps = 19/230 (8%)
Query: 1 MTVMDNEEMRPIDHL---IRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD 57
+ + D + PID L + D + EV+ WG+ NY LGTG+ + +P ++
Sbjct: 121 LNLEDTKGRTPIDLLSGPVSQANGDSQDSVATEVFSWGSGTNYQLGTGNAHIQKLPCKVE 180
Query: 58 SLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLG-----LGSESSVVSPKKLNFEK 112
+L + IK V KFHSV VS DG +++ G G+GGRLG G ++V++P+++
Sbjct: 181 ALHGSYIKTVAASKFHSVAVSSDGELYTWGFGRGGRLGHPDIQSGQTTAVITPRQVTVGL 240
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
+ ++ V A ++ H+V +G +F G N QLG PS TP SSLK
Sbjct: 241 GRKQVNVVAA--AKHHTVIATEAGELFTWGSNREGQLGY---PSVDTQATPRRVSSLK-- 293
Query: 173 QPLIGVCCGRFHS-VVYSSREVYTFGIH-AGQLGHSPVTVSSASVIEPKV 220
Q +I V HS V + EV+T+G + GQLG+ T +SAS P++
Sbjct: 294 QRIISVAAANKHSAAVADTGEVFTWGCNKEGQLGYG--TSNSASNCIPRM 341
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G+ + +P +++ LK +K V K+H++ + D V++ G
Sbjct: 314 EVFTWGCNKEGQLGYGTSNSASNCIPRMVEYLKGKVLKGVSAAKYHTLVLGADSEVFTWG 373
Query: 88 H 88
H
Sbjct: 374 H 374
>gi|410959608|ref|XP_003986396.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Felis catus]
Length = 1315
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 41/231 (17%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKTTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
R+ V++ R+ G G
Sbjct: 172 FSRSG-----------VYIKQIPRLV---EGLSGH------------------------N 193
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
+ + ++DH+V L G V+ GLN FHQLG+ PPPS P + LK + +IGV
Sbjct: 194 CSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQMQAKYLKG-RTVIGV 252
Query: 179 CCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
GRFH+V+++ VYT G++ GQLG+ P V P+ + + +D+
Sbjct: 253 AAGRFHTVLWTREAVYTMGLNGGQLGYLPDPNGEKYVTAPRQVSALHHKDI 303
>gi|390356636|ref|XP_003728835.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Strongylocentrotus
purpuratus]
Length = 2548
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 52/58 (89%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QAT++REDL GFIFESNRGTKHSF AETSLGPEF GWTGK+G+R RSKLE V+QKV+
Sbjct: 820 QATVLREDLAGFIFESNRGTKHSFIAETSLGPEFSTGWTGKRGRRFRSKLEQVQQKVK 877
>gi|355694384|gb|AER99651.1| HECT domain containing 1 [Mustela putorius furo]
Length = 437
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 220 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 277
>gi|326920709|ref|XP_003206611.1| PREDICTED: e3 ubiquitin-protein ligase HECTD1-like, partial
[Meleagris gallopavo]
Length = 1426
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|390363984|ref|XP_001187444.2| PREDICTED: E3 ubiquitin-protein ligase HECTD1-like
[Strongylocentrotus purpuratus]
Length = 159
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 52/58 (89%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QAT++REDL GFIFESNRGTKHSF AETSLGPEF GWTGK+G+R RSKLE V+QKV+
Sbjct: 44 QATVLREDLAGFIFESNRGTKHSFIAETSLGPEFSTGWTGKRGRRFRSKLEQVQQKVK 101
>gi|363734774|ref|XP_421227.3| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Gallus gallus]
Length = 2570
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|449274753|gb|EMC83831.1| E3 ubiquitin-protein ligase HECTD1 [Columba livia]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|345804260|ref|XP_850301.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HECTD1
isoform 1 [Canis lupus familiaris]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|293348058|ref|XP_001078686.2| PREDICTED: E3 ubiquitin-protein ligase HECTD1-like [Rattus
norvegicus]
Length = 2460
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|149410343|ref|XP_001512305.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Ornithorhynchus
anatinus]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|302425231|sp|Q69ZR2.2|HECD1_MOUSE RecName: Full=E3 ubiquitin-protein ligase HECTD1; AltName:
Full=HECT domain-containing protein 1; AltName:
Full=Protein open mind
Length = 2618
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 778 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 835
>gi|224051393|ref|XP_002200542.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Taeniopygia guttata]
Length = 2571
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|301766288|ref|XP_002918561.1| PREDICTED: e3 ubiquitin-protein ligase HECTD1-like [Ailuropoda
melanoleuca]
gi|281337630|gb|EFB13214.1| hypothetical protein PANDA_007038 [Ailuropoda melanoleuca]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|126281993|ref|XP_001364091.1| PREDICTED: e3 ubiquitin-protein ligase HECTD1 [Monodelphis
domestica]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|426376644|ref|XP_004055105.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Gorilla gorilla
gorilla]
Length = 2520
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 734 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 791
>gi|344273919|ref|XP_003408766.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Loxodonta africana]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|327263659|ref|XP_003216635.1| PREDICTED: e3 ubiquitin-protein ligase HECTD1-like [Anolis
carolinensis]
Length = 2570
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|205277432|ref|NP_659037.2| E3 ubiquitin-protein ligase HECTD1 [Mus musculus]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|350586889|ref|XP_001924707.4| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HECTD1
[Sus scrofa]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|395503637|ref|XP_003756170.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Sarcophilus
harrisii]
Length = 2569
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|332223222|ref|XP_003260766.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Nomascus leucogenys]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|296214748|ref|XP_002753836.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 isoform 2 [Callithrix
jacchus]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|118498337|ref|NP_056197.2| E3 ubiquitin-protein ligase HECTD1 [Homo sapiens]
gi|313104227|sp|Q9ULT8.3|HECD1_HUMAN RecName: Full=E3 ubiquitin-protein ligase HECTD1; AltName: Full=E3
ligase for inhibin receptor; AltName: Full=EULIR;
AltName: Full=HECT domain-containing protein 1
gi|225000802|gb|AAI72391.1| HECT domain containing 1 [synthetic construct]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|410962028|ref|XP_003987579.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Felis catus]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|403263985|ref|XP_003924275.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1-like [Saimiri
boliviensis boliviensis]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|397501149|ref|XP_003821255.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Pan paniscus]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|380811470|gb|AFE77610.1| E3 ubiquitin-protein ligase HECTD1 [Macaca mulatta]
gi|383417287|gb|AFH31857.1| E3 ubiquitin-protein ligase HECTD1 [Macaca mulatta]
gi|410342771|gb|JAA40332.1| HECT domain containing 1 [Pan troglodytes]
Length = 2608
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|351715662|gb|EHB18581.1| E3 ubiquitin-protein ligase HECTD1 [Heterocephalus glaber]
Length = 2609
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|386781818|ref|NP_001248188.1| E3 ubiquitin-protein ligase HECTD1 [Macaca mulatta]
gi|114652554|ref|XP_509889.2| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Pan troglodytes]
gi|297694876|ref|XP_002824691.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Pongo abelii]
gi|119586354|gb|EAW65950.1| HECT domain containing 1, isoform CRA_a [Homo sapiens]
gi|119586356|gb|EAW65952.1| HECT domain containing 1, isoform CRA_a [Homo sapiens]
gi|380811468|gb|AFE77609.1| E3 ubiquitin-protein ligase HECTD1 [Macaca mulatta]
gi|383411647|gb|AFH29037.1| E3 ubiquitin-protein ligase HECTD1 [Macaca mulatta]
gi|410256328|gb|JAA16131.1| HECT domain containing 1 [Pan troglodytes]
gi|410297804|gb|JAA27502.1| HECT domain containing 1 [Pan troglodytes]
gi|410342769|gb|JAA40331.1| HECT domain containing 1 [Pan troglodytes]
Length = 2610
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|431917824|gb|ELK17058.1| E3 ubiquitin-protein ligase HECTD1 [Pteropus alecto]
Length = 2489
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 761 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 818
>gi|212549599|ref|NP_001131085.1| HECT domain containing E3 ubiquitin protein ligase 1 [Xenopus
(Silurana) tropicalis]
gi|197246313|gb|AAI68474.1| Unknown (protein for MGC:172681) [Xenopus (Silurana) tropicalis]
Length = 2533
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 800 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 857
>gi|293359900|ref|XP_343061.4| PREDICTED: E3 ubiquitin-protein ligase HECTD1-like [Rattus
norvegicus]
Length = 2610
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|444722510|gb|ELW63202.1| E3 ubiquitin-protein ligase HECTD1 [Tupaia chinensis]
Length = 2543
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|417407028|gb|JAA50149.1| Putative e3 ubiquitin-protein ligase hectd1 [Desmodus rotundus]
Length = 2610
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|395838302|ref|XP_003792055.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Otolemur garnettii]
Length = 2538
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|194207268|ref|XP_001489913.2| PREDICTED: e3 ubiquitin-protein ligase HECTD1 [Equus caballus]
Length = 2610
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|30060232|gb|AAP13073.1| E3 ligase for inhibin receptor [Homo sapiens]
Length = 2612
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|291403694|ref|XP_002718172.1| PREDICTED: HECT domain containing 1 [Oryctolagus cuniculus]
Length = 2610
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|417407008|gb|JAA50139.1| Putative e3 ubiquitin-protein ligase hectd1 [Desmodus rotundus]
Length = 2563
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|354473999|ref|XP_003499219.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1-like [Cricetulus
griseus]
gi|344241425|gb|EGV97528.1| E3 ubiquitin-protein ligase HECTD1 [Cricetulus griseus]
Length = 2610
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|402875906|ref|XP_003901733.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Papio anubis]
Length = 2553
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 720 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 777
>gi|348557981|ref|XP_003464797.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HECTD1-like [Cavia porcellus]
Length = 2556
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 723 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 780
>gi|167535657|ref|XP_001749502.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772130|gb|EDQ85787.1| predicted protein [Monosiga brevicollis MX1]
Length = 1367
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 11/200 (5%)
Query: 24 SSNQFNEVYI--WGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
SSN+ V I WG N+ + LG + T P L+ +I + KFH++F++ G
Sbjct: 150 SSNKHEAVSIFGWGDNSTFALGLHNDNTSIKPRLVTFPHNVAITTLSTSKFHTLFLTTTG 209
Query: 82 RVWSCGHGQGGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
RV++CGHG+GGRLG+G+ + S + + L+ + + VA +DHS+F+ +G V
Sbjct: 210 RVYACGHGRGGRLGIGALDYSTLGIRPLDAPSNVRFVAVAAG---RDHSLFVTTNGFVLS 266
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHA 200
CG N F QLG+ TP +L+ + + G HSV+ + ++T G
Sbjct: 267 CGTNQFGQLGMRDVAE---LHTPAILKTLRGQRARLAAASG-VHSVIVTDGGIFTCGQSN 322
Query: 201 GQLGHSPVTVSSASVIEPKV 220
GQLGHS A + EPK+
Sbjct: 323 GQLGHSHGRAQEA-IFEPKL 341
>gi|355693201|gb|EHH27804.1| hypothetical protein EGK_18090 [Macaca mulatta]
Length = 2125
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 292 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 349
>gi|71891695|dbj|BAA86445.2| KIAA1131 protein [Homo sapiens]
Length = 2168
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 335 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 392
>gi|47214819|emb|CAF89646.1| unnamed protein product [Tetraodon nigroviridis]
Length = 371
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKV+
Sbjct: 192 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVK 249
>gi|47195716|emb|CAF88307.1| unnamed protein product [Tetraodon nigroviridis]
Length = 283
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKV+
Sbjct: 73 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVK 130
>gi|194676903|ref|XP_877459.3| PREDICTED: E3 ubiquitin-protein ligase HECTD1 isoform 6 [Bos
taurus]
Length = 1788
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QAT+++EDLPGF+FESNRGT+HSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATVLKEDLPGFVFESNRGTRHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|432937619|ref|XP_004082467.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HECTD1-like [Oryzias latipes]
Length = 2565
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKV+
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVK 834
>gi|348527500|ref|XP_003451257.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Oreochromis
niloticus]
Length = 2570
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKV+
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVK 834
>gi|410898778|ref|XP_003962874.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1-like [Takifugu
rubripes]
Length = 2545
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKV+
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVK 834
>gi|55925452|ref|NP_001002504.2| E3 ubiquitin-protein ligase HECTD1 [Danio rerio]
gi|21322371|emb|CAD32862.1| novel protein with HECT-domain (ubiquitin-transferase) [Danio
rerio]
Length = 2576
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKV+
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVK 834
>gi|297488135|ref|XP_002696742.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Bos taurus]
gi|296475360|tpg|DAA17475.1| TPA: thyroid hormone receptor interactor 12-like [Bos taurus]
Length = 2610
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QAT+++EDLPGF+FESNRGT+HSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATVLKEDLPGFVFESNRGTRHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|440910665|gb|ELR60436.1| E3 ubiquitin-protein ligase HECTD1 [Bos grunniens mutus]
Length = 2608
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QAT+++EDLPGF+FESNRGT+HSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATVLKEDLPGFVFESNRGTRHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|426248352|ref|XP_004017927.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1 [Ovis aries]
Length = 2610
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QAT+++EDLPGF+FESNRGT+HSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATVLKEDLPGFVFESNRGTRHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>gi|449468281|ref|XP_004151850.1| PREDICTED: uncharacterized protein LOC101206334 [Cucumis sativus]
Length = 1085
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 116/213 (54%), Gaps = 22/213 (10%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E++ WG+ NY LGTG++ + +P +DSL +SIK V KFHSV VS G+V++ G G
Sbjct: 155 ELFSWGSGTNYQLGTGNEHIQKLPCKIDSLHGSSIKLVSASKFHSVAVSACGQVYTWGFG 214
Query: 90 QGGRLG------LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
+GGRLG +++V++P+++ F ++ A ++ H+V G VF G
Sbjct: 215 RGGRLGHPDFDIHSGQAAVITPRQVIFGLGSRRVRAIAA--AKHHTVIATEGGEVFTWGS 272
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AG 201
N QLG + S PTP SSL+S ++ V H+ V S S E++T+G + G
Sbjct: 273 NREGQLGYT---SVDTQPTPRRVSSLRSK--IVDVAAANKHTAVVSESGEIFTWGCNREG 327
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPGFIF 234
QLG+ T +SAS P+V E L G +F
Sbjct: 328 QLGYG--TSNSASNYTPRVV-----EYLKGKVF 353
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 16 IRDRKIDVSS--------NQFNEVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIK 65
+R + +DV++ ++ E++ WG N LG G+ + P +++ LK
Sbjct: 295 LRSKIVDVAAANKHTAVVSESGEIFTWGCNREGQLGYGTSNSASNYTPRVVEYLKGKVFA 354
Query: 66 QVCMDKFHSVFVSDDGRVWSCGHG--QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
+V KFH++ + DG V++ GH R+ + L F + K +L V +
Sbjct: 355 RVAAAKFHTICLGVDGEVYTWGHRLVTPRRVVIARNLKKSGNTPLKFHRMK-RLHVVNIA 413
Query: 124 ISQDHSVFLMLSGSVF 139
HS+ L G+VF
Sbjct: 414 AGMVHSMALTDDGAVF 429
>gi|449484006|ref|XP_004156756.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101206334
[Cucumis sativus]
Length = 1084
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 116/213 (54%), Gaps = 22/213 (10%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E++ WG+ NY LGTG++ + +P +DSL +SIK V KFHSV VS G+V++ G G
Sbjct: 155 ELFSWGSGTNYQLGTGNEHIQKLPCKIDSLHGSSIKLVSASKFHSVAVSACGQVYTWGFG 214
Query: 90 QGGRLG------LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
+GGRLG +++V++P+++ F ++ A ++ H+V G VF G
Sbjct: 215 RGGRLGHPDFDIHSGQAAVITPRQVIFGLGSRRVRAIAA--AKHHTVIATEGGEVFTWGS 272
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AG 201
N QLG + S PTP SSL+S ++ V H+ V S S E++T+G + G
Sbjct: 273 NREGQLGYT---SVDTQPTPRRVSSLRSK--IVDVAAANKHTAVVSESGEIFTWGCNREG 327
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPGFIF 234
QLG+ T +SAS P+V E L G +F
Sbjct: 328 QLGYG--TSNSASNYTPRVV-----EYLKGKVF 353
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 16 IRDRKIDVSS--------NQFNEVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIK 65
+R + +DV++ ++ E++ WG N LG G+ + P +++ LK
Sbjct: 295 LRSKIVDVAAANKHTAVVSESGEIFTWGCNREGQLGYGTSNSASNYTPRVVEYLKGKVFA 354
Query: 66 QVCMDKFHSVFVSDDGRVWSCGHG--QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
+V KFH++ + DG V++ GH R+ + L F + K +L V +
Sbjct: 355 RVAAAKFHTICLGVDGEVYTWGHRLVTPRRVVIARNLKKSGNTPLKFHRMK-RLHVVNIA 413
Query: 124 ISQDHSVFLMLSGSVF 139
HS+ L G+VF
Sbjct: 414 AGMVHSMALTDDGAVF 429
>gi|326436361|gb|EGD81931.1| hypothetical protein PTSG_02617 [Salpingoeca sp. ATCC 50818]
Length = 2721
Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 70/207 (33%), Positives = 103/207 (49%), Gaps = 16/207 (7%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK--RAS---IKQVCMDKFHSVFV 77
VSS+ + VY WG+N N+ LG R P+ + + K R+S V +KFH+VFV
Sbjct: 288 VSSDVYGHVYTWGSNINFTLGHADDANRSHPQRITAEKHLRSSHDGFVAVSTNKFHTVFV 347
Query: 78 SDDGRVWSCGHGQGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSG 136
+ DGRV++CGH GR G G S S + P + D A +DH++F+ G
Sbjct: 348 ASDGRVYACGHNHLGRFGTGRGSKSHLEPVHIPVSFTCDS-----AVAGRDHTLFVSRKG 402
Query: 137 SVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTF 196
+ + CG N QLG+ S V+PTP+P + ++ V + HSV ++ +Y
Sbjct: 403 TAYACGSNDVGQLGII---SVDVAPTPVP-IRFGAGVKVLRVAASKCHSVFLTTHGLYMC 458
Query: 197 GIHAGQLG-HSPVTVSSASVIEPKVQA 222
G GQLG S V A P++ A
Sbjct: 459 GQQNGQLGLPSSVVARDAHTKSPQLVA 485
>gi|296089288|emb|CBI39060.3| unnamed protein product [Vitis vinifera]
Length = 1025
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 107/202 (52%), Gaps = 21/202 (10%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E++ WG+ NY LGTG+ + +P +DSL IK V KFHSV VS G V++ G
Sbjct: 154 TELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGF 213
Query: 89 GQGGRLG------LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
G+GGRLG +++V++P+++ ++ A ++ H+V G VF G
Sbjct: 214 GRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAA--AKHHTVVATEGGEVFTWG 271
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH 199
N QLG + V PIPR SSLKS ++ V H+ V S S EV+T+G +
Sbjct: 272 SNREGQLGYTS-----VDTQPIPRRVSSLKSK--IVAVAAANKHTAVISESGEVFTWGCN 324
Query: 200 -AGQLGHSPVTVSSASVIEPKV 220
GQLG+ T +SAS P+V
Sbjct: 325 KKGQLGYG--TSNSASNYTPRV 344
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G+ + P +++ LK +K V K+H++ + DG +++ G
Sbjct: 317 EVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWG 376
Query: 88 HGQGGRLGLGSESSVVSPKKL----NFEKD-------KDKLGVAMASISQDHSVFLMLSG 136
H +V+P+++ N +K+ +L V + HS+ L G
Sbjct: 377 H------------RLVTPRRVVIVRNLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDG 424
Query: 137 SVF 139
++F
Sbjct: 425 AIF 427
>gi|356560879|ref|XP_003548714.1| PREDICTED: uncharacterized protein LOC100814063 [Glycine max]
Length = 1080
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 126/235 (53%), Gaps = 28/235 (11%)
Query: 1 MTVMDNEEMRPIDHL-------IRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVP 53
+T+ D++ P+D L +RD V++ EV+ WG+ ANY LGTG+ + +P
Sbjct: 123 ITLEDSKSRIPVDLLSGSVFQVLRDEHSSVAT----EVFSWGSGANYQLGTGNAHIQKLP 178
Query: 54 ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLG------LGSESSVVSPKK 107
+DSL + IK + KFHSV ++ G V++ G G+GGRLG +++V++P++
Sbjct: 179 CKVDSLGGSFIKLISAGKFHSVALTARGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQ 238
Query: 108 LNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS 167
+ ++ +A+A+ ++ H+V G VF G N QLG PS PTP S
Sbjct: 239 VTSGLGSRRV-MAIAA-AKHHTVISTQGGEVFTWGSNREGQLGY---PSVDTQPTPRRVS 293
Query: 168 SLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLGHSPVTVSSASVIEPKV 220
SL+S ++ V H+ V S EV+T+G + GQLG+ T +SAS P V
Sbjct: 294 SLRSR--IVAVAAANKHTAVVSDLGEVFTWGCNREGQLGYG--TSNSASNYTPHV 344
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 27/127 (21%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWS 85
EV+ WG N LG G+ + P +++SLK ++ +V K+H++ + DG V++
Sbjct: 315 LGEVFTWGCNREGQLGYGTSNSASNYTPHVVESLKGKTLTRVSAAKYHTIVLGSDGEVFT 374
Query: 86 CGHGQGGRLGLGSESSVVSPKKL----NFEKD---------KDKLGVAMASISQDHSVFL 132
GH +V+PK++ N +K K++L V + HS+ L
Sbjct: 375 WGH------------RLVTPKRVVVSRNLKKSGSTPLKFHRKERLNVVSIAAGMVHSMAL 422
Query: 133 MLSGSVF 139
G++F
Sbjct: 423 TDDGALF 429
>gi|225439268|ref|XP_002265056.1| PREDICTED: uncharacterized protein LOC100261641 [Vitis vinifera]
Length = 1076
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 107/202 (52%), Gaps = 21/202 (10%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E++ WG+ NY LGTG+ + +P +DSL IK V KFHSV VS G V++ G
Sbjct: 154 TELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGF 213
Query: 89 GQGGRLG------LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
G+GGRLG +++V++P+++ ++ A ++ H+V G VF G
Sbjct: 214 GRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAA--AKHHTVVATEGGEVFTWG 271
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH 199
N QLG + V PIPR SSLKS ++ V H+ V S S EV+T+G +
Sbjct: 272 SNREGQLGYTS-----VDTQPIPRRVSSLKSK--IVAVAAANKHTAVISESGEVFTWGCN 324
Query: 200 -AGQLGHSPVTVSSASVIEPKV 220
GQLG+ T +SAS P+V
Sbjct: 325 KKGQLGYG--TSNSASNYTPRV 344
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G+ + P +++ LK +K V K+H++ + DG +++ G
Sbjct: 317 EVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWG 376
Query: 88 HGQGGRLGLGSESSVVSPKKL----NFEKD-------KDKLGVAMASISQDHSVFLMLSG 136
H +V+P+++ N +K+ +L V + HS+ L G
Sbjct: 377 H------------RLVTPRRVVIVRNLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDG 424
Query: 137 SVF 139
++F
Sbjct: 425 AIF 427
>gi|147822080|emb|CAN63618.1| hypothetical protein VITISV_038963 [Vitis vinifera]
Length = 653
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 107/202 (52%), Gaps = 21/202 (10%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E++ WG+ NY LGTG+ + +P +DSL IK V KFHSV VS G V++ G
Sbjct: 154 TELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGF 213
Query: 89 GQGGRLG------LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
G+GGRLG +++V++P+++ ++ A ++ H+V G VF G
Sbjct: 214 GRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAA--AKHHTVVATEGGEVFTWG 271
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH 199
N QLG + V PIPR SSLKS ++ V H+ V S S EV+T+G +
Sbjct: 272 SNREGQLGYTS-----VDTQPIPRRVSSLKSK--IVAVAAANKHTAVISESGEVFTWGCN 324
Query: 200 -AGQLGHSPVTVSSASVIEPKV 220
GQLG+ T +SAS P+V
Sbjct: 325 KKGQLGYG--TSNSASNYTPRV 344
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G+ + P +++ LK +K V K+H++ + DG +++ G
Sbjct: 317 EVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTWG 376
Query: 88 HGQGGRLGLGSESSVVSPKKL----NFEKD-------KDKLGVAMASISQDHSVFLMLSG 136
H +V+P+++ N +K+ +L V + HS+ L G
Sbjct: 377 H------------RLVTPRRVVIVRNLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDG 424
Query: 137 SVF 139
++F
Sbjct: 425 AIF 427
>gi|414883648|tpg|DAA59662.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1078
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 117/230 (50%), Gaps = 19/230 (8%)
Query: 1 MTVMDNEEMRPIDHL---IRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD 57
+ + D + P+D + + D EV+ WG+ NY LGTG+ + +P ++
Sbjct: 121 LALEDTKGRTPVDLISCPVSQANGDFPDAVATEVFSWGSGTNYQLGTGNAHIQKLPCKVE 180
Query: 58 SLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLG-----LGSESSVVSPKKLNFEK 112
+L + IK V KFHSV VS +G +++ G G+GGRLG G ++V++P+++
Sbjct: 181 ALHGSYIKTVAASKFHSVAVSSNGELYTWGFGRGGRLGHPDIHSGQTTAVITPRQVTVGL 240
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
+ ++ A ++ H+V G +F G N QLG PS PTP SLK
Sbjct: 241 GRKRVNAVAA--AKHHTVIATELGELFTWGSNREGQLGY---PSVDTQPTPRRVGSLK-- 293
Query: 173 QPLIGVCCGRFHS-VVYSSREVYTFGIH-AGQLGHSPVTVSSASVIEPKV 220
Q +I V HS V + EV+T+G + GQLG+ T +SAS P++
Sbjct: 294 QRIISVAAANKHSAAVADTGEVFTWGCNKEGQLGYG--TSNSASNCIPRM 341
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V + + E++ WG+N LG S T+ P + SLK+ I +K HS V+D G
Sbjct: 256 VIATELGELFTWGSNREGQLGYPSVDTQPTPRRVGSLKQRIISVAAANK-HSAAVADTGE 314
Query: 83 VWSCGHGQGGRLGLGSESSVVS--PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
V++ G + G+LG G+ +S + P+ + + K K GV+ A H++ L G VF
Sbjct: 315 VFTWGCNKEGQLGYGTSNSASNCIPRMVEYLKGKVLRGVSAAKY---HTIVLGADGEVFT 371
Query: 141 CG 142
G
Sbjct: 372 WG 373
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G+ + +P +++ LK ++ V K+H++ + DG V++ G
Sbjct: 314 EVFTWGCNKEGQLGYGTSNSASNCIPRMVEYLKGKVLRGVSAAKYHTIVLGADGEVFTWG 373
Query: 88 H 88
H
Sbjct: 374 H 374
>gi|68473061|ref|XP_719336.1| potential ankyrin repeat protein [Candida albicans SC5314]
gi|46441149|gb|EAL00448.1| potential ankyrin repeat protein [Candida albicans SC5314]
gi|238880366|gb|EEQ44004.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1439
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 109/224 (48%), Gaps = 35/224 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELL----------------DSLKRASIKQVCMDKFH 73
E+Y++G N+N LG G R P LL + KR K++ + K H
Sbjct: 181 EIYVFGCNSNNQLGVGDSTDRATPALLYHDNFKFATDLTGSISERFKRPRYKRITISKNH 240
Query: 74 SVFVSDDGRVWSCGHGQGGRL--GLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVF 131
SV V+ DG ++SCG G GRL GL ++ K++ F DK VA IS +HS+
Sbjct: 241 SVVVTQDGELFSCGVGSRGRLGHGLTDLNNYFKFKRIEFFNDKTIKDVA---ISSNHSIA 297
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVS--------PTPIPR-SSLKSSQPLIGVCCGR 182
L V+ GLNSF+QLG+ P ++ S TPI L+ Q +IG+ +
Sbjct: 298 LTTDNEVYAWGLNSFNQLGV-PNMNNKKSTNYLDKFIATPIMVGGELRKMQNIIGIEVSK 356
Query: 183 FHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIR 226
HS+ +S + +G++ GQ+G S + IE KVQ +R
Sbjct: 357 IHSLAWSKNYLCFWGLNVGQMGIS----YTNGDIEVKVQERSVR 396
>gi|224123724|ref|XP_002319149.1| predicted protein [Populus trichocarpa]
gi|222857525|gb|EEE95072.1| predicted protein [Populus trichocarpa]
Length = 1075
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 115/220 (52%), Gaps = 26/220 (11%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD 70
P+ +IRD V++ EV+ WG+ ANY LGTG+ + +P +D+L + +K V
Sbjct: 140 PVLQVIRDGYNSVAT----EVFSWGSGANYQLGTGNTHIQKLPCKVDALHGSFVKLVSAA 195
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLG------LGSESSVVSPKKLNFEKDKDKLGVAMASI 124
KFHS VS G V++ G G+GGRLG +++V++P+++ ++ A
Sbjct: 196 KFHSAAVSASGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVTSGLGSRRVKAIAA-- 253
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGR 182
++ H+V G VF G N QLG + V P PR SSL+S ++ V
Sbjct: 254 AKHHTVLATEGGEVFTWGSNREGQLG------YTVDTQPTPRRVSSLRSR--IVAVAAAN 305
Query: 183 FHSVVYS-SREVYTFGIH-AGQLGHSPVTVSSASVIEPKV 220
H+ V S S EV+T+G + GQLG+ T +SAS P+
Sbjct: 306 KHTAVVSDSGEVFTWGCNREGQLGYG--TSNSASNYTPRA 343
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 27/125 (21%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G+ + P ++ LK + V + K+H++ + G V++ G
Sbjct: 316 EVFTWGCNREGQLGYGTSNSASNYTPRAVEYLKGKVLTGVSVAKYHTIVLGAGGEVYTWG 375
Query: 88 HGQGGRLGLGSESSVVSPKKL----NFEKDK---------DKLGVAMASISQDHSVFLML 134
H +V+P+++ N +K ++L VA + HS+ L
Sbjct: 376 H------------RLVTPRRVVIARNLKKSGNTPWKSHRLERLHVAAIAAGMVHSLALTD 423
Query: 135 SGSVF 139
G++F
Sbjct: 424 DGTLF 428
>gi|255722896|ref|XP_002546382.1| predicted protein [Candida tropicalis MYA-3404]
gi|240130899|gb|EER30461.1| predicted protein [Candida tropicalis MYA-3404]
Length = 721
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 100/205 (48%), Gaps = 33/205 (16%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELL----------------DSLKRASIKQVCMDKFH 73
EVY+ G N+N LG G R P +L + L++ KQ+ + K H
Sbjct: 184 EVYVLGRNSNNQLGVGDSTDRVTPTMLSHSSFKQVQEDLDSISEVLQQPRYKQIVISKNH 243
Query: 74 SVFVSDDGRVWSCGHGQGGRLGLGSE--SSVVSPKKLNFEKDKDKLGVAMASISQDHSVF 131
S+ V+ DG V+SCG G GRLG G E + ++++F D + + A+IS +HSV
Sbjct: 244 SLVVTKDGEVFSCGIGARGRLGHGIEDLNDYFKFQRISFFND---MFIKDAAISNNHSVV 300
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPP------------SHIVSPTPIPRSSLKSSQPLIGVC 179
L V+ GLNSF+QLG+ + + +PT + L+GV
Sbjct: 301 LTSHNQVYAWGLNSFNQLGVPNSAVSKKKKITHYLDNFLATPTLVSGELRNVGSNLLGVK 360
Query: 180 CGRFHSVVYSSREVYTFGIHAGQLG 204
+ HSVV+S +Y +G++ GQ+G
Sbjct: 361 VSKIHSVVWSRNALYFWGLNVGQMG 385
>gi|384248125|gb|EIE21610.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 609
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 112/232 (48%), Gaps = 18/232 (7%)
Query: 2 TVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKR 61
++ D + P+D L K + S +EVY WG ANY LGT ++ + P LDSL
Sbjct: 93 SIQDFKGRIPLDLLSASLKAYLLSGTASEVYSWGNGANYQLGTEAEGLQLTPNRLDSLHG 152
Query: 62 ASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLG------LGSESSVVSPKKLNFEKDKD 115
I + KFHS V+ DG +++ G G+GGRLG ES+V+ P+ + +
Sbjct: 153 TPIVALAAAKFHSAAVAKDGSLYTWGFGRGGRLGHPEFHIHSGESAVILPRLVALPGRRT 212
Query: 116 KLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
VA + + H+V + +G +F G N +LG + V P PR Q +
Sbjct: 213 ---VAAVATGKHHTVAVTRAGELFTWGSNRDGRLGYTA-----VDSQPTPRRVTSMRQRV 264
Query: 176 IGVCCGRFHSVVYSS-REVYTFGIH-AGQLGHSPVTVSSASVIEPKVQATII 225
+ V H+VV + VY++G + GQLG+ T SAS P++ ++
Sbjct: 265 MAVAAANRHTVVLAEGGTVYSWGSNLQGQLGYG--TSDSASNAVPRIVEAMV 314
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 31 VYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY WG+N LG G+ + VP +++++ +I V K H+V ++ +G V++ GH
Sbjct: 283 VYSWGSNLQGQLGYGTSDSASNAVPRIVEAMVGKTITAVAAAKRHTVVLTVEGDVYTWGH 342
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKD 115
VV+PK++ +D
Sbjct: 343 ------------RVVTPKRVQLAGARD 357
>gi|149235818|ref|XP_001523787.1| hypothetical protein LELG_05203 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452766|gb|EDK47022.1| hypothetical protein LELG_05203 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1651
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 36/218 (16%)
Query: 25 SNQFNE--------VYIWGTNANYNLGTGSQQTRDVPELLDS------------------ 58
S +FNE +Y++G+N N LG+G + R +P +++
Sbjct: 203 SKKFNEAKSTKRHHLYVFGSNLNNQLGSGDTKDRIIPSKINNHESFSDVYDNIGANNLQS 262
Query: 59 -LKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKD--KD 115
L+ + + + K HS+ ++ G +++ GHG GRLG G+E + + KKL F D
Sbjct: 263 FLQTPCFQDINITKHHSMVLTTKGEIFTAGHGSRGRLGQGNEKNCSTFKKLEFFNDIHGS 322
Query: 116 KLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPP-------SHIVSPTPIPRSS 168
V + + S +HS+ L S VF GLNSF+QLG++ I SP +
Sbjct: 323 YKRVVLIATSNNHSLALTSSNEVFAWGLNSFNQLGVNSSKKVKSYLDDFISSPILVGGEL 382
Query: 169 LKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHS 206
K + ++G+ + HSV +S +++++G++ GQ+G S
Sbjct: 383 RKLGEKILGIAVSKIHSVAWSKNQLFSWGLNVGQMGIS 420
>gi|26449496|dbj|BAC41874.1| unknown protein [Arabidopsis thaliana]
Length = 1078
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 23/209 (11%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+ Q +EV+ WG ANY LGTG+Q + VP +DSL IK V KFHSV +S G
Sbjct: 144 IGEQQSSEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGE 203
Query: 83 VWSCGHGQGGRLG------LGSESSVVSPKKLNFEKDKDKLG---VAMASISQDHSVFLM 133
V++ G G+GGRLG +++V++P+++ LG V + ++ H+V
Sbjct: 204 VYTWGFGRGGRLGHPEFDIHSGQAAVITPRQV-----ISGLGSRRVKAVAAAKHHTVIAT 258
Query: 134 LSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-RE 192
G V+ G N QLG + S TP +SLK+ ++ V H+ V S E
Sbjct: 259 EGGDVYTWGSNREGQLGYT---SVDTQATPRKVTSLKAK--IVAVSAANKHTAVVSDCGE 313
Query: 193 VYTFGIH-AGQLGHSPVTVSSASVIEPKV 220
V+T+G + GQLG+ T +SAS P++
Sbjct: 314 VFTWGCNKEGQLGYG--TSNSASNYSPRL 340
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V + + +VY WG+N LG S T+ P + SLK A I V H+ VSD G
Sbjct: 255 VIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLK-AKIVAVSAANKHTAVVSDCGE 313
Query: 83 VWSCGHGQGGRLGLGSESSV--VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
V++ G + G+LG G+ +S SP+ +++ K K+ A+AS S+ H++ L G V+
Sbjct: 314 VFTWGCNKEGQLGYGTSNSASNYSPRLVDYL--KGKVFTAIAS-SKYHTLVLRNDGEVYT 370
Query: 141 CG 142
G
Sbjct: 371 WG 372
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G+ + P L+D LK + K+H++ + +DG V++ G
Sbjct: 313 EVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 372
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
H +V+P+++ ++ K G
Sbjct: 373 H------------RLVTPRRVIISRNLKKAG 391
>gi|30678939|ref|NP_187029.2| ankyrin repeat and regulator of chromosome condensation (RCC1)
domain-containing protein [Arabidopsis thaliana]
gi|332640472|gb|AEE73993.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
domain-containing protein [Arabidopsis thaliana]
Length = 1078
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 23/209 (11%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+ Q +EV+ WG ANY LGTG+Q + VP +DSL IK V KFHSV +S G
Sbjct: 144 IGEQQSSEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGE 203
Query: 83 VWSCGHGQGGRLG------LGSESSVVSPKKLNFEKDKDKLG---VAMASISQDHSVFLM 133
V++ G G+GGRLG +++V++P+++ LG V + ++ H+V
Sbjct: 204 VYTWGFGRGGRLGHPEFDIHSGQAAVITPRQV-----ISGLGSRRVKAVAAAKHHTVIAT 258
Query: 134 LSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-RE 192
G V+ G N QLG + S TP +SLK+ ++ V H+ V S E
Sbjct: 259 EGGDVYTWGSNREGQLGYT---SVDTQATPRKVTSLKAK--IVAVSAANKHTAVVSDCGE 313
Query: 193 VYTFGIH-AGQLGHSPVTVSSASVIEPKV 220
V+T+G + GQLG+ T +SAS P++
Sbjct: 314 VFTWGCNKEGQLGYG--TSNSASNYSPRL 340
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V + + +VY WG+N LG S T+ P + SLK A I V H+ VSD G
Sbjct: 255 VIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLK-AKIVAVSAANKHTAVVSDCGE 313
Query: 83 VWSCGHGQGGRLGLGSESSV--VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
V++ G + G+LG G+ +S SP+ +++ K K+ A+AS S+ H++ L G V+
Sbjct: 314 VFTWGCNKEGQLGYGTSNSASNYSPRLVDYL--KGKVFTAIAS-SKYHTLVLRNDGEVYT 370
Query: 141 CG 142
G
Sbjct: 371 WG 372
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G+ + P L+D LK + K+H++ + +DG V++ G
Sbjct: 313 EVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 372
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
H +V+P+++ ++ K G
Sbjct: 373 H------------RLVTPRRVIISRNLKKAG 391
>gi|344303491|gb|EGW33740.1| hypothetical protein SPAPADRAFT_135574 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1492
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 31/224 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS---------------LKRASIKQVCMDKFHS 74
++Y+ G N+N LG G R VP L L + KQ+ + K H+
Sbjct: 184 DIYVLGCNSNNQLGLGDATDRSVPSRLSHGNFKLPSESKSARSVLSKPRYKQMAISKNHA 243
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSES-SVVSPKKLNFEKDKDKLG-VAMASISQDHSVFL 132
+ V+ DG+V+SCG G G+LG G ++ + K++ + + D + V ++S +HS+ L
Sbjct: 244 LIVTYDGQVYSCGIGSRGQLGHGEDANNYYRFKRIEYFSNIDDMKHVKSVAVSNNHSLAL 303
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVS----------PTPIPRSSLKSSQPLIGVCCGR 182
V+ GLNSF+QLG P + S P+ + K+ + +C +
Sbjct: 304 TQGNEVYSWGLNSFNQLGYDTPTTKKSSNDFLDSFRSVPSLVTGDLRKNKNQIKNICVSK 363
Query: 183 FHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIR 226
HSV Y+ E++ +G++ GQ+G ++ + A IE KV +R
Sbjct: 364 IHSVAYTKNELFFWGLNVGQMG---ISFTKAD-IEVKVHDVSLR 403
>gi|343429424|emb|CBQ72997.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1778
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 110/262 (41%), Gaps = 81/262 (30%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELL-------------- 56
P D L + S +++ WG+N NYNLG G R +P+ +
Sbjct: 158 PADALSFEPTRTQHSRTLTQLFTWGSNRNYNLGLGDGDDRQLPDKITLRRPATNASTAQS 217
Query: 57 --DSLK----------RASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSV 102
D+ + R IK + M + H+V ++D+ VW CG G GRLG ++
Sbjct: 218 VQDAFRASLPAGKKFDRIGIKDIAMSRLHTVILTDEKVANVWVCGLGSNGRLGRSPQT-- 275
Query: 103 VSPKKLNFEKDKDKLGVAMA-SISQDHSVFLMLSGSVFVCGLNSFHQLGLS--------- 152
+ +FE KD A + +++QDH++ + SG+V+ GLN F QLG S
Sbjct: 276 ----QTSFEPLKDFNETARSVAVAQDHTLIITASGAVYSFGLNRFSQLGYSIEQGLGTVG 331
Query: 153 ----------------PP-------------PSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
P P IV P LK + ++G C +
Sbjct: 332 STSGKLGGGAGVTFGQPAASTQNIELDIQITPRRIVGP-------LKKEE-VLGAACSKL 383
Query: 184 HSVVYSSREVYTFGIHAGQLGH 205
HS V++S +YT+G + GQLG+
Sbjct: 384 HSAVFTSEGLYTWGTNTGQLGY 405
>gi|354545705|emb|CCE42433.1| hypothetical protein CPAR2_200760 [Candida parapsilosis]
Length = 1393
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 29/203 (14%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP---------------ELL-DSLKRASIKQVCMDKFH 73
++Y+ G N+N LG G + R P E+L + + KQ+ + K H
Sbjct: 179 DIYVVGCNSNNQLGLGDSKDRSQPLKLFDDAFIHEQNDSEILAERFSKPKYKQMVISKNH 238
Query: 74 SVFVSDDGRVWSCGHGQGGRLGLGSE--SSVVSPKKLNFEKDKDKLGVAMASISQDHSVF 131
+ V+ DG V++CG G GRLG GS+ +S K++ F + K+ V+ +IS +HS+
Sbjct: 239 AAIVTVDGDVFTCGVGSRGRLGHGSDDLTSSFKFKRVEFFLHESKM-VSDIAISNNHSIA 297
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSH---------IVSPTPIPRSSLKS-SQPLIGVCCG 181
L G V+ G+N F+QLG++ P + I +PT + K+ ++ L+G+
Sbjct: 298 LTSDGDVYTWGMNGFNQLGVNTPSTKTINSYLDDWIATPTLVAGELRKNKTKKLLGIGVS 357
Query: 182 RFHSVVYSSREVYTFGIHAGQLG 204
+ HSV ++ E+Y +G++ GQ+G
Sbjct: 358 KVHSVTWTKNEMYFWGLNVGQMG 380
>gi|297828852|ref|XP_002882308.1| ankyrin repeat family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328148|gb|EFH58567.1| ankyrin repeat family protein [Arabidopsis lyrata subsp. lyrata]
Length = 1081
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 116/221 (52%), Gaps = 27/221 (12%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD 70
P+ +I +++ V++ EV+ WG ANY LGTG+Q + VP +DSL IK V
Sbjct: 139 PVAQVIGEQQSSVAT----EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAA 194
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLG------LGSESSVVSPKKLNFEKDKDKLG---VAM 121
KFHSV +S G V++ G G+GGRLG +++V++P+++ LG V
Sbjct: 195 KFHSVAISSHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQV-----ISGLGSRRVKA 249
Query: 122 ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
+ ++ H+V G V+ G N QLG + S TP +SLK+ ++ V
Sbjct: 250 VAAAKHHTVIATEGGDVYTWGSNREGQLGYT---SVDTQATPRKVTSLKAK--IVAVSAA 304
Query: 182 RFHSVVYSS-REVYTFGIH-AGQLGHSPVTVSSASVIEPKV 220
H+ V S EV+T+G + GQLG+ T +SAS P++
Sbjct: 305 NKHTAVVSECGEVFTWGCNREGQLGYG--TSNSASNYSPRL 343
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V + + +VY WG+N LG S T+ P + SLK A I V H+ VS+ G
Sbjct: 258 VIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLK-AKIVAVSAANKHTAVVSECGE 316
Query: 83 VWSCGHGQGGRLGLGSESSV--VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
V++ G + G+LG G+ +S SP+ +++ K K+ A+AS S+ H++ L G V+
Sbjct: 317 VFTWGCNREGQLGYGTSNSASNYSPRLVDYL--KGKVFTAIAS-SKYHTLVLRNDGEVYT 373
Query: 141 CG 142
G
Sbjct: 374 WG 375
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G+ + P L+D LK + K+H++ + +DG V++ G
Sbjct: 316 EVFTWGCNREGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 375
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
H +V+P+++ ++ K G
Sbjct: 376 H------------RLVTPRRIIISRNLKKAG 394
>gi|42572237|ref|NP_974213.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
domain-containing protein [Arabidopsis thaliana]
gi|332640471|gb|AEE73992.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
domain-containing protein [Arabidopsis thaliana]
Length = 1081
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 116/221 (52%), Gaps = 27/221 (12%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD 70
P+ +I +++ V++ EV+ WG ANY LGTG+Q + VP +DSL IK V
Sbjct: 139 PVAQVIGEQQSSVAT----EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAA 194
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLG------LGSESSVVSPKKLNFEKDKDKLG---VAM 121
KFHSV +S G V++ G G+GGRLG +++V++P+++ LG V
Sbjct: 195 KFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQV-----ISGLGSRRVKA 249
Query: 122 ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
+ ++ H+V G V+ G N QLG + S TP +SLK+ ++ V
Sbjct: 250 VAAAKHHTVIATEGGDVYTWGSNREGQLGYT---SVDTQATPRKVTSLKAK--IVAVSAA 304
Query: 182 RFHSVVYSS-REVYTFGIH-AGQLGHSPVTVSSASVIEPKV 220
H+ V S EV+T+G + GQLG+ T +SAS P++
Sbjct: 305 NKHTAVVSDCGEVFTWGCNKEGQLGYG--TSNSASNYSPRL 343
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V + + +VY WG+N LG S T+ P + SLK A I V H+ VSD G
Sbjct: 258 VIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLK-AKIVAVSAANKHTAVVSDCGE 316
Query: 83 VWSCGHGQGGRLGLGSESSV--VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
V++ G + G+LG G+ +S SP+ +++ K K+ A+AS S+ H++ L G V+
Sbjct: 317 VFTWGCNKEGQLGYGTSNSASNYSPRLVDYL--KGKVFTAIAS-SKYHTLVLRNDGEVYT 373
Query: 141 CG 142
G
Sbjct: 374 WG 375
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G+ + P L+D LK + K+H++ + +DG V++ G
Sbjct: 316 EVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 375
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
H +V+P+++ ++ K G
Sbjct: 376 H------------RLVTPRRVIISRNLKKAG 394
>gi|334185062|ref|NP_001189802.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
domain-containing protein [Arabidopsis thaliana]
gi|332640473|gb|AEE73994.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
domain-containing protein [Arabidopsis thaliana]
Length = 1099
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 116/221 (52%), Gaps = 27/221 (12%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD 70
P+ +I +++ V++ EV+ WG ANY LGTG+Q + VP +DSL IK V
Sbjct: 139 PVAQVIGEQQSSVAT----EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAA 194
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLG------LGSESSVVSPKKLNFEKDKDKLG---VAM 121
KFHSV +S G V++ G G+GGRLG +++V++P+++ LG V
Sbjct: 195 KFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQV-----ISGLGSRRVKA 249
Query: 122 ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
+ ++ H+V G V+ G N QLG + S TP +SLK+ ++ V
Sbjct: 250 VAAAKHHTVIATEGGDVYTWGSNREGQLGYT---SVDTQATPRKVTSLKAK--IVAVSAA 304
Query: 182 RFHSVVYSS-REVYTFGIH-AGQLGHSPVTVSSASVIEPKV 220
H+ V S EV+T+G + GQLG+ T +SAS P++
Sbjct: 305 NKHTAVVSDCGEVFTWGCNKEGQLGYG--TSNSASNYSPRL 343
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V + + +VY WG+N LG S T+ P + SLK A I V H+ VSD G
Sbjct: 258 VIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLK-AKIVAVSAANKHTAVVSDCGE 316
Query: 83 VWSCGHGQGGRLGLGSESSV--VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
V++ G + G+LG G+ +S SP+ +++ K K+ A+AS S+ H++ L G V+
Sbjct: 317 VFTWGCNKEGQLGYGTSNSASNYSPRLVDYL--KGKVFTAIAS-SKYHTLVLRNDGEVYT 373
Query: 141 CG 142
G
Sbjct: 374 WG 375
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G+ + P L+D LK + K+H++ + +DG V++ G
Sbjct: 316 EVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWG 375
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
H +V+P+++ ++ K G
Sbjct: 376 H------------RLVTPRRVIISRNLKKAG 394
>gi|405965593|gb|EKC30956.1| E3 ubiquitin-protein ligase HECTD1 [Crassostrea gigas]
Length = 2380
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 50/58 (86%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
Q+TI++EDL GFIFESNRGTKHSFTAETSLGPEF GW GKK +++RSK E ++ KV+
Sbjct: 786 QSTILKEDLAGFIFESNRGTKHSFTAETSLGPEFATGWGGKKNRKMRSKTEEIRSKVK 843
>gi|357508731|ref|XP_003624654.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
gi|124359292|gb|ABD28429.2| Regulator of chromosome condensation/beta-lactamase-inhibitor
protein II [Medicago truncatula]
gi|355499669|gb|AES80872.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
Length = 1099
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 19/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E++ WG+ ANY LGTG+ + +P +DSL + IK + KFHSV ++D G V++ G G
Sbjct: 169 ELFSWGSGANYQLGTGNAHIQKLPCKVDSLNGSIIKLISAAKFHSVALTDRGEVYTWGFG 228
Query: 90 QGGRLG------LGSESSVVSPKK-LNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
+GGRLG +++V++P++ ++ + + +A A + H+V G VF G
Sbjct: 229 RGGRLGHPDFDIHSGQAAVITPRQVISGLGSRRVMAIAAA---KHHTVVATQGGEVFTWG 285
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-A 200
N QLG + S PTP S+L+S ++ V H+ V S EV+T+G +
Sbjct: 286 SNREGQLGYT---SVDTQPTPRRVSTLRSR--IVAVAAANKHTAVISDLGEVFTWGCNRE 340
Query: 201 GQLGHSPVTVSSASVIEPKV 220
GQLG+ T +SAS P V
Sbjct: 341 GQLGYG--TSNSASNYTPHV 358
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V + Q EV+ WG+N LG S T+ P + +L R+ I V H+ +SD G
Sbjct: 273 VVATQGGEVFTWGSNREGQLGYTSVDTQPTPRRVSTL-RSRIVAVAAANKHTAVISDLGE 331
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
V++ G + G+LG G+ +S + E K K+ + S ++ H++ L G VF G
Sbjct: 332 VFTWGCNREGQLGYGTSNSASNYTPHVVESLKGKI-LTRVSAAKYHTIVLGSDGEVFTWG 390
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 27/127 (21%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWS 85
EV+ WG N LG G+ + P +++SLK + +V K+H++ + DG V++
Sbjct: 329 LGEVFTWGCNREGQLGYGTSNSASNYTPHVVESLKGKILTRVSAAKYHTIVLGSDGEVFT 388
Query: 86 CGHGQGGRLGLGSESSVVSPKKL----NFEKD---------KDKLGVAMASISQDHSVFL 132
GH +V+PK++ N +K K++L V + HS+ L
Sbjct: 389 WGH------------RLVTPKRVVITRNLKKSGSIPLKFHRKERLHVVSIAAGMAHSMAL 436
Query: 133 MLSGSVF 139
G++F
Sbjct: 437 TEDGALF 443
>gi|356571739|ref|XP_003554031.1| PREDICTED: uncharacterized protein LOC100800604 [Glycine max]
Length = 1061
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 119/235 (50%), Gaps = 28/235 (11%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFN----EVYIWGTNANYNLGTGSQQTRDVPELL 56
+T+ D++ P+D L+ V N + EV+ WG+ NY LGTG+ + +P +
Sbjct: 123 ITLEDSKSRIPVD-LLSGSVFQVLGNDHSSVATEVFSWGSGTNYQLGTGNAHIQKLPCKV 181
Query: 57 DSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLG------LGSESSVVSPKKLNF 110
DSL + IK + KFHSV ++ G V++ G G+GGRLG +++V++P+++
Sbjct: 182 DSLGGSFIKLISAGKFHSVALTARGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVT- 240
Query: 111 EKDKDKLG---VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS 167
LG V ++ H V G VF G N QLG PS PTP S
Sbjct: 241 ----SGLGSRRVMAIGAAKHHMVIATQGGEVFTWGSNREGQLGY---PSVDTQPTPRRVS 293
Query: 168 SLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLGHSPVTVSSASVIEPKV 220
SL+S ++ V H+ V S EV+T+G + GQLG+ T +SAS P+V
Sbjct: 294 SLRSR--IVAVAAANKHTAVVSDLGEVFTWGCNREGQLGYG--TSNSASNYTPRV 344
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 27/129 (20%)
Query: 26 NQFNEVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
+ EV+ WG N LG G+ + P +++SLK ++ +V K+H++ + DG V
Sbjct: 313 SDLGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKTLTRVSAAKYHTIVLGSDGEV 372
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKD-------------KDKLGVAMASISQDHSV 130
++ GH +V+PK++ ++ K++L V + HS+
Sbjct: 373 FTWGH------------RLVTPKRVVVSRNLKRSGSTLLKFHRKERLSVVSIAAGMVHSM 420
Query: 131 FLMLSGSVF 139
L G++F
Sbjct: 421 ALTDDGALF 429
>gi|443894491|dbj|GAC71839.1| uncharacterized conserved protein [Pseudozyma antarctica T-34]
Length = 1754
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 62/234 (26%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRDVPELL------------------------DSLKRAS 63
+++ WG+N NYNLG G R +P+ + R
Sbjct: 181 LTQLFTWGSNRNYNLGLGDGDDRQLPDKITLRRQPAANSSSPEENFRASLPAGKKFDRIG 240
Query: 64 IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAM 121
IK + M + H+V ++D+ VW CG G GRLG ++ + +FE KD A
Sbjct: 241 IKDIAMSRLHTVVLTDEKVANVWVCGLGANGRLGRSPQT------QTSFEPLKDFAETAR 294
Query: 122 A-SISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSH-IVS----------------PTP 163
+ +++QDH++ + SG+V+ GLN F QLG + IV+ P
Sbjct: 295 SVAVAQDHTLIITASGAVYSFGLNRFAQLGYTIEQEFGIVASTTAKLGGGAGVTFGQPAN 354
Query: 164 IPRSSLK------------SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
P+ L + ++G C + HSVV++S ++T+G + GQLG+
Sbjct: 355 TPQVELDIQISPRRIVGPLKKEFVLGAACSKLHSVVFTSEGLFTWGTNTGQLGY 408
>gi|260939970|ref|XP_002614285.1| hypothetical protein CLUG_05771 [Clavispora lusitaniae ATCC 42720]
gi|238852179|gb|EEQ41643.1| hypothetical protein CLUG_05771 [Clavispora lusitaniae ATCC 42720]
Length = 1392
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 39/229 (17%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-------------------ELLDSLKRASIKQVCMD 70
+VY++G N N++LG G R VP ++ D L+ + V +
Sbjct: 152 DVYMYGANGNHHLGMGDAHDRSVPSRVSPLDLHAAKTGDAQDFDIRDLLRPTRVCAVAIA 211
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
K+HSV ++ DGR+ +CG G GRLG G+ +++ + + D + A++S H++
Sbjct: 212 KYHSVLITRDGRLLTCGLGARGRLGHGNTANLYRFQNVALFGDHRAVA---AAVSNSHTL 268
Query: 131 FLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI-------------G 177
L ++ G+NS +QLG + + S PR ++S L+ G
Sbjct: 269 VLTADNQLYAWGINSLNQLGFTSEDT--FSFKSGPRDVYENSPKLVGSGDLRRAGGSFRG 326
Query: 178 VCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIR 226
V + HS+ Y+S +Y +G++ GQ+G P+T+ S E ++ T +
Sbjct: 327 VAVSKIHSLAYTSHSLYFWGLNVGQMG--PMTLVSDKPDEFRLHETTFK 373
>gi|241959486|ref|XP_002422462.1| BTB domain and ankyrin repeat protein, putative [Candida
dubliniensis CD36]
gi|223645807|emb|CAX40470.1| BTB domain and ankyrin repeat protein, putative [Candida
dubliniensis CD36]
Length = 1456
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 100/204 (49%), Gaps = 31/204 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELL----------------DSLKRASIKQVCMDKFH 73
E+Y++G N N LG G R P LL + KR K++ + K H
Sbjct: 183 EIYVFGCNTNNQLGVGDSTDRATPALLYHDNFKLTSDTASPISERFKRPRYKRIIISKNH 242
Query: 74 SVFVSDDGRVWSCGHGQGGRL--GLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVF 131
S+ V+ DG ++SCG G GRL GL ++ K++ F DK VA IS +HS+
Sbjct: 243 SLVVTQDGELFSCGVGSRGRLGHGLADLNNYFKFKRIEFFNDKKIKDVA---ISSNHSIA 299
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVS--------PTPI-PRSSLKSSQPLIGVCCGR 182
L V+ GLNSF+QLG+ P ++ S TPI L+ Q ++G +
Sbjct: 300 LTTDNEVYAWGLNSFNQLGV-PNMNNKKSTNYLDKFIATPILAGGELRRIQNIMGAEVSK 358
Query: 183 FHSVVYSSREVYTFGIHAGQLGHS 206
HS+V+S + +G++ GQ+G S
Sbjct: 359 IHSLVWSKNCLCFWGLNVGQMGIS 382
>gi|395331935|gb|EJF64315.1| hypothetical protein DICSQDRAFT_54213 [Dichomitus squalens LYAD-421
SS1]
Length = 1482
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 99/218 (45%), Gaps = 29/218 (13%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL----------DSLKR----ASIKQVCMDKFHS 74
E+Y WG+N N LG G R +PEL+ +SL ++QV M + H+
Sbjct: 157 QELYTWGSNRNAALGVGDGDDRAIPELVSLRVSPVPQTESLNARFTPIRVRQVAMSRLHT 216
Query: 75 VFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
V V+D+ G + CG G GGRLG G + F L V ++ QDH++ L
Sbjct: 217 VIVTDEPRGNLRVCGFGSGGRLGPGQHTQYTPVPLPGF-----NLAVESVAVGQDHTLIL 271
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPS------HIVSPTPIPRSSLKSSQPLIGVCCGRFHSV 186
+G V GLN F QLG P+ + TP S + + GV + S
Sbjct: 272 TKNGEVHSWGLNRFSQLGYIVEPAASGRAEEPIQSTPRKISGAIRNHTIEGVAACKTASA 331
Query: 187 VYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATI 224
++ EV+T+G + GQLG+ V+ I P+V I
Sbjct: 332 CWTGDEVFTWGTNNGQLGYD--RVAQPVQIAPRVVTKI 367
>gi|168050037|ref|XP_001777467.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671198|gb|EDQ57754.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1088
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 114/226 (50%), Gaps = 15/226 (6%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK 60
+T+ D + PID + K +S++ EVY WG ANY LGTG+ + +P LD+L+
Sbjct: 122 LTIEDTKGRIPIDLISGPVKSVISNSVMTEVYSWGNGANYQLGTGTAGIQRIPCRLDTLQ 181
Query: 61 RASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLG------LGSESSVVSPKKLNFEKDK 114
I V KFHS V+ +G +++ G G+GGRLG + +V+ P+++
Sbjct: 182 NLDITYVAAAKFHSAAVTANGDMYTWGFGRGGRLGHPDFDIHSGQVAVIIPRQVTSGLAG 241
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQP 174
K V ++++ HSV G V+ G N +LG PS TP +LK
Sbjct: 242 KK--VNSIAVAKHHSVISTDGGEVYTWGSNRDGRLGY---PSVDTQATPRKVGTLKVRVS 296
Query: 175 LIGVCCGRFHSVVYSSREVYTFGIHA-GQLGHSPVTVSSASVIEPK 219
++ + +V+ +VYT+G ++ GQLG+ T +SAS P+
Sbjct: 297 IVA-AANKHSAVLTQCGDVYTWGCNSEGQLGYG--TSNSASNCMPR 339
>gi|67523233|ref|XP_659677.1| hypothetical protein AN2073.2 [Aspergillus nidulans FGSC A4]
gi|40745749|gb|EAA64905.1| hypothetical protein AN2073.2 [Aspergillus nidulans FGSC A4]
gi|259487442|tpe|CBF86124.1| TPA: BTB domain and ankyrin repeat protein (AFU_orthologue;
AFUA_2G04760) [Aspergillus nidulans FGSC A4]
Length = 1680
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 103/228 (45%), Gaps = 48/228 (21%)
Query: 24 SSNQF-NEVYIWGTNANYNLGTGSQQTRDVPELL--------------------DSLKRA 62
S+N F +EV+ +G+N N NLG G Q R PE + D +K A
Sbjct: 345 STNLFGDEVFTFGSNKNLNLGVGDQDDRQYPERITLTRPTHLLHRFFREHQERHDDVKTA 404
Query: 63 S-------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESS 101
S I+ + M K H+ ++DD ++ CG G GGRLG G ES+
Sbjct: 405 SSPDPSDQDLPAFIKARPLKIQTLAMSKLHTAILTDDPESNLFICGFGPGGRLGTGDEST 464
Query: 102 VVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSP 161
S + +K VA ++ QDH++ + G +F G N F QLG P ++
Sbjct: 465 RFSFVCIEGGGLANK-KVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDD 523
Query: 162 TPIPRSSLKSSQP-----LIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
P+ S + P ++G HSVVYS+ +YTFG + GQLG
Sbjct: 524 VPVQLSPRQIFNPFKKEVILGAAASAVHSVVYSTSGLYTFGKNEGQLG 571
>gi|302753302|ref|XP_002960075.1| hypothetical protein SELMODRAFT_163545 [Selaginella moellendorffii]
gi|300171014|gb|EFJ37614.1| hypothetical protein SELMODRAFT_163545 [Selaginella moellendorffii]
Length = 1051
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 15/198 (7%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E++ WG +NY LGTGS + VP +++L A I +V KFHS V+ G+++S G
Sbjct: 147 LKELFSWGNGSNYQLGTGSAGIQRVPCRVETLHGADIVRVSAAKFHSTAVNSSGQLFSWG 206
Query: 88 HGQGGRLG---LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
+G+GGRLG E +V++P+++ + VA A + H++ G V+ G N
Sbjct: 207 YGRGGRLGHEDYSGEVAVIAPRQVTGLCGRRVKNVAAA---KHHTIVATEGGEVYTWGTN 263
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHA-GQ 202
QLG P+ TP S+L++ ++ V HS V S EVYT+G + GQ
Sbjct: 264 REGQLGY---PAVDTQSTPRRVSTLRAK--VVEVAAANKHSAAVTESGEVYTWGCNKDGQ 318
Query: 203 LGHSPVTVSSASVIEPKV 220
LG+ T +SAS P+V
Sbjct: 319 LGYG--TSNSASNCVPRV 334
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 19/184 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+ + + EVY WGTN LG + T+ P + +L RA + +V HS V++ G
Sbjct: 249 IVATEGGEVYTWGTNREGQLGYPAVDTQSTPRRVSTL-RAKVVEVAAANKHSAAVTESGE 307
Query: 83 VWSCGHGQGGRLGLGSESSVVS--PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
V++ G + G+LG G+ +S + P+ +++ K + L ++ A + H+V +++ VF
Sbjct: 308 VYTWGCNKDGQLGYGTSNSASNCVPRVVDYLKGRKALTISAA---KRHTV-VIVETEVFT 363
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQ-PLIGVCCGRFHSVVYSSREVYTFGIH 199
G H++ P +V + R++ K+ Q PL R H V ++ V++ I
Sbjct: 364 WG----HKM---VSPRRVV----LVRNTKKAGQHPLKFHLSERLHIVAVAAGVVHSTAIA 412
Query: 200 AGQL 203
A L
Sbjct: 413 ADGL 416
>gi|448525034|ref|XP_003869070.1| hypothetical protein CORT_0D00850 [Candida orthopsilosis Co 90-125]
gi|380353423|emb|CCG22933.1| hypothetical protein CORT_0D00850 [Candida orthopsilosis]
Length = 1390
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 29/203 (14%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP---------------ELL-DSLKRASIKQVCMDKFH 73
++Y+ G N+N LG G + R P E+L + + K++ + K H
Sbjct: 179 DIYVIGCNSNSQLGLGDSKDRSQPLKVFDDAFICEQNESEILAERFCKPRYKKMVISKNH 238
Query: 74 SVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPK--KLNFEKDKDKLGVAMASISQDHSVF 131
+ ++ DG V++CG G GRLG GS++ S K ++ F ++ K V +IS +HS+
Sbjct: 239 AAIITVDGDVFTCGVGSRGRLGHGSDNLTSSFKFRRVEFFHNESK-TVQDIAISNNHSIV 297
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSH---------IVSPTPIPRSSLKS-SQPLIGVCCG 181
L G V+ G+N F+QLG++ P + I +P + K+ S+ L+GV
Sbjct: 298 LTSDGDVYAWGMNGFNQLGVNTPSTKAINNYLDDWIATPVLVAGELRKNKSRKLLGVDVS 357
Query: 182 RFHSVVYSSREVYTFGIHAGQLG 204
+ HSV ++ E+Y +G++ GQ+G
Sbjct: 358 KIHSVTWTKNELYFWGLNVGQMG 380
>gi|302804628|ref|XP_002984066.1| hypothetical protein SELMODRAFT_40379 [Selaginella moellendorffii]
gi|300148418|gb|EFJ15078.1| hypothetical protein SELMODRAFT_40379 [Selaginella moellendorffii]
Length = 1023
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 15/198 (7%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E++ WG +NY LGTG+ + VP +++L A I +V KFHS V+ G+++S G
Sbjct: 126 LKELFSWGNGSNYQLGTGTAGIQRVPCRVETLHGADIVRVSAAKFHSTAVNSSGQLFSWG 185
Query: 88 HGQGGRLG---LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
+G+GGRLG E +V++P+++ + VA A + H++ G V+ G N
Sbjct: 186 YGRGGRLGHEDYSGEVAVIAPRQVTGLCGRRVKNVAAA---KHHTIVATEGGEVYTWGTN 242
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHA-GQ 202
QLG P+ TP S+L++ ++ V HS V S EVYT+G + GQ
Sbjct: 243 REGQLGY---PAVDTQSTPRRVSTLRAK--VVEVAAANKHSAAVTESGEVYTWGCNKDGQ 297
Query: 203 LGHSPVTVSSASVIEPKV 220
LG+ T +SAS P+V
Sbjct: 298 LGYG--TSNSASNCVPRV 313
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 91/184 (49%), Gaps = 19/184 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+ + + EVY WGTN LG + T+ P + +L RA + +V HS V++ G
Sbjct: 228 IVATEGGEVYTWGTNREGQLGYPAVDTQSTPRRVSTL-RAKVVEVAAANKHSAAVTESGE 286
Query: 83 VWSCGHGQGGRLGLGSESSVVS--PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
V++ G + G+LG G+ +S + P+ +++ K + L ++ A + H+V +++ VF
Sbjct: 287 VYTWGCNKDGQLGYGTSNSASNCVPRVVDYLKGRKALAISAA---KRHTV-VIVETEVFT 342
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQ-PLIGVCCGRFHSVVYSSREVYTFGIH 199
G H++ P +V + R++ K+ Q PL R H V ++ V++ I
Sbjct: 343 WG----HKM---VSPRRVV----LVRNTKKAGQHPLKFHLSERLHIVAVAAGVVHSTAIA 391
Query: 200 AGQL 203
A L
Sbjct: 392 ADGL 395
>gi|425767743|gb|EKV06305.1| hypothetical protein PDIP_80160 [Penicillium digitatum Pd1]
gi|425769516|gb|EKV08008.1| hypothetical protein PDIG_70840 [Penicillium digitatum PHI26]
Length = 1635
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 100/234 (42%), Gaps = 57/234 (24%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPE-------------------------- 54
+D+S++ EV+ G+N N NLG G Q R PE
Sbjct: 255 VDISAD---EVFTLGSNKNLNLGLGDQDDRQFPERISLQRPEHLLHRFYREYQENLEHQG 311
Query: 55 --------------LLDSLKRASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGS 98
+L + K + + M K H+ ++DD ++ CG G GGRLG G
Sbjct: 312 IEDSVPEGKSTELPILITNKPMKFRDIIMSKLHTAIITDDPEANLFMCGFGPGGRLGTGD 371
Query: 99 ESS---VVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPP 155
ES+ V + E K V A++ QDHS+ + G +F G N F QLG P
Sbjct: 372 ESTRFTFVCIETGGLEGKK----VVSAALGQDHSLAITEQGEIFSWGSNKFGQLGYGLPR 427
Query: 156 SHIVSPTPI---PRSSLK--SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ + PI PR + ++G HSVV+S+ +YTFG + GQLG
Sbjct: 428 TSNKNDVPIQTTPRQIFNPFKKETIVGAAASSIHSVVFSTSGLYTFGKNEGQLG 481
>gi|255932875|ref|XP_002557908.1| Pc12g10880 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582527|emb|CAP80715.1| Pc12g10880 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1582
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 104/247 (42%), Gaps = 57/247 (23%)
Query: 10 RPIDHLIRDRKIDVSSN-QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS----- 63
R I HL + + N +EV+ G+N N NLG G Q R PE + SLKR
Sbjct: 205 RDIKHLSEKSALKGTVNISADEVFTLGSNKNLNLGLGDQDDRQFPERI-SLKRPEHLLRR 263
Query: 64 ------------------------------------IKQVCMDKFHSVFVSDD--GRVWS 85
++ + M K H+ ++DD ++
Sbjct: 264 FYREYQEKLEHLGLEDSAPKSKSTELPTLIRNKPMKLQDIIMSKLHTAIITDDPEANLFM 323
Query: 86 CGHGQGGRLGLGSESS---VVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
CG G GGRLG G ES+ V + E K V A++ QDHS+ + G +F G
Sbjct: 324 CGFGPGGRLGTGDESTRFTFVCIETGGLEGKK----VVSAALGQDHSLAITEQGEIFSWG 379
Query: 143 LNSFHQLGLSPPPSHIVSPTPI---PRSSLK--SSQPLIGVCCGRFHSVVYSSREVYTFG 197
N F QLG P + + P+ PR + ++G HSVV+S+ +YTFG
Sbjct: 380 SNKFGQLGYGLPRTSNKNDIPVQTTPRQIFNPFKKETILGAAASSIHSVVFSTSGLYTFG 439
Query: 198 IHAGQLG 204
+ GQLG
Sbjct: 440 KNEGQLG 446
>gi|392565122|gb|EIW58299.1| hypothetical protein TRAVEDRAFT_167773 [Trametes versicolor
FP-101664 SS1]
Length = 1445
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 33/202 (16%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL-------------DS-LKRASIKQVCMDKFHS 74
+E+Y WG+N N LG G R PELL DS ++Q+ M + H+
Sbjct: 156 DELYTWGSNRNAALGVGDGDDRTYPELLSLRISPVPETEPIDSRFTPIRVRQIVMSRLHT 215
Query: 75 VFVSDDGR--VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
V V+D+ R + CG G GGRLG G + F + V + QDH++ L
Sbjct: 216 VIVTDEPRANLRVCGFGSGGRLGPGQHTQYAPIPLPGFNQT-----VKSVAPGQDHTLIL 270
Query: 133 MLSGSVFVCGLNSFHQLGL---------SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
+G V+ GLN F QLG S P + TP S ++ ++GV +
Sbjct: 271 TKTGEVYSWGLNRFSQLGYVVETATGARSEEP---IQATPRRISGAIRNRTVLGVAACKT 327
Query: 184 HSVVYSSREVYTFGIHAGQLGH 205
SV +++ EV+T+G + GQLG+
Sbjct: 328 ASVCWTADEVFTWGTNNGQLGY 349
>gi|448117897|ref|XP_004203369.1| Piso0_000976 [Millerozyma farinosa CBS 7064]
gi|448120343|ref|XP_004203952.1| Piso0_000976 [Millerozyma farinosa CBS 7064]
gi|359384237|emb|CCE78941.1| Piso0_000976 [Millerozyma farinosa CBS 7064]
gi|359384820|emb|CCE78355.1| Piso0_000976 [Millerozyma farinosa CBS 7064]
Length = 1579
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 115/242 (47%), Gaps = 44/242 (18%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELL--DSLKRASIK------QVC--------MDKFH 73
++YI G+N N NLG G R +P L D K + ++C M K H
Sbjct: 202 DIYICGSNKNNNLGLGDSTDRLIPTRLAHDDFKDFDVSYKDIQSKLCKPRFSLLRMSKNH 261
Query: 74 SVFVSDDGRVWSCGHGQGGRLGLGSESS-VVSPKKLNFEK---DKDKLGVAMAS------ 123
S+ ++ DG ++SCG G GRLG GS+++ + KK+ F + D D V+ S
Sbjct: 262 SIILTKDGCLYSCGIGSRGRLGHGSDNNDLFRFKKIRFFESSIDDDFSTVSSKSKKVCNF 321
Query: 124 -ISQDHSVFLMLSGSVFVCGLNSFHQLGLS----------PPPSHIVSPTPIPRSSL-KS 171
IS H+V L + +F G N++ QLG S S+ P + L K+
Sbjct: 322 DISAHHTVALTTNNEIFTWGYNNYSQLGYSVASSSGSNGISQESYEGYPKQVSSGELRKN 381
Query: 172 SQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDLPG 231
P+ GV C + HS+ Y+ E+Y +G+ GQ+G P SS + I+ K+ I + G
Sbjct: 382 GAPINGVRCSKIHSLAYTKNEIYFWGLCIGQMG-IPFD-SSKATIDYKIDGIIAK----G 435
Query: 232 FI 233
FI
Sbjct: 436 FI 437
>gi|345560200|gb|EGX43325.1| hypothetical protein AOL_s00215g61 [Arthrobotrys oligospora ATCC
24927]
Length = 1576
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 54/274 (19%)
Query: 5 DNEEMRPIDHLIRDRKIDVSSNQF------NEVYIWGTNANYNLGTGSQQTRDVPELL-- 56
D++E P L+ D+ QF +E +IWG+N N +LG R PE +
Sbjct: 198 DSDEDNPEPELL-----DLEVGQFKGEYLGDETFIWGSNKNVSLGFSDGDDRQFPERMPI 252
Query: 57 ---------DSLKRAS---IKQVCMDKFHSVFVSD--DGRVWSCGHGQGGRLGLGSESSV 102
DSL + +K + + KFHS ++ ++ CGHGQGGRLGLG +S+
Sbjct: 253 PRPDSDGSQDSLITLAPIYVKDIQLAKFHSAIITTALSNNLYICGHGQGGRLGLGHQSTE 312
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
+ +++ + V+ ++ Q H+V ++ +G VF G + QLG P++I
Sbjct: 313 FTFRRVELPRR-----VSTVALGQGHTVAVLENGDVFTWGTGRYGQLGY---PANIDKND 364
Query: 163 P-----IPRSSLKS--SQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG----------- 204
+PR + + +IG + HS V++ ++ FG + GQLG
Sbjct: 365 KEEYQLVPRQVFTNLRREKVIGAAASKHHSAVHTIDSIFVFGKNEGQLGLVDADSRTLEA 424
Query: 205 -HSPVTVSSASVIEPKVQATIIREDLPGFIFESN 237
SP V++A + E + + + + E++
Sbjct: 425 QTSPRKVAAAVLSEQPISMITVTDKATAILLENH 458
>gi|358367200|dbj|GAA83819.1| BTB domain and ankyrin repeat protein [Aspergillus kawachii IFO
4308]
Length = 1631
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 51/225 (22%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS------------------------- 63
+EV+ +G+N N NLG G Q R PE + +LKR
Sbjct: 256 DEVFTFGSNKNLNLGVGDQDDRQYPERI-TLKRPEHLLQRFYREFLEQRSNDDTFDPNQE 314
Query: 64 -----------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVS 104
I+ + M K H+ ++ D ++ CG G GGRLG G ES+ S
Sbjct: 315 PGYSTDLPALVKNKPIKIQNIIMSKLHTAILTTDPESNLFLCGFGPGGRLGTGDESTRFS 374
Query: 105 PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI 164
++ ++ V++A + QDH++ + G +F G N F QLG S P S+ PI
Sbjct: 375 FVCIDTGGLANRRVVSVA-LGQDHTLAITDRGEIFSWGSNKFGQLGYSLPRSNNRDDVPI 433
Query: 165 PRSSLKSSQP-----LIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
S + P ++G HSVV+S+ +YTFG + GQLG
Sbjct: 434 QNSPRQIFNPFKKEVILGAAASAIHSVVFSTSGLYTFGKNEGQLG 478
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 98/181 (54%), Gaps = 11/181 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG LGTG R +P+ +++L + + QV HS+ +++DGR++S G
Sbjct: 114 VYSWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNI 173
Query: 91 GGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG + SS SP++++ D + +A + HS L LSG V+ G N+ HQL
Sbjct: 174 HGQLGLGKDISSQASPQQVS---ALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQL 230
Query: 150 GLS--PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLGH 205
GLS P I P I ++L+S + V CG H+ V + VYTFG AGQLG
Sbjct: 231 GLSQAKPKEQIFKPYSI--AALRSLD-VAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGR 287
Query: 206 S 206
+
Sbjct: 288 N 288
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 35 GTNANYNLG----TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
G N+ LG +G ++ PEL+ +L+ + V K HS+ V + GRV+S G G
Sbjct: 62 GDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGT 121
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G + PK +N K V + DHS+ L G +F G N QLG
Sbjct: 122 FGQLGTGELGDRLIPKTIN---ALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLG 178
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
L S SP + S PL V G HS S S VY +G +A QLG S
Sbjct: 179 LGKDISSQASPQQV---SALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLS 233
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 83/196 (42%), Gaps = 21/196 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQ----VCMDKFHSVFVSDDGRVWSC 86
+Y WG + LG G + P RA Q V + H++ + DDG V SC
Sbjct: 2 LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61
Query: 87 GHGQGGRLGL----GSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
G G+LG G E P+ + E K V S ++HS+ + G V+
Sbjct: 62 GDNSRGQLGRRLPSGQEKRSYGPELIQALETQK----VVHVSCGKEHSLAVCNKGRVYSW 117
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG--I 198
G +F QLG ++ T S K +I V CG HS+ ++ ++++G I
Sbjct: 118 GAGTFGQLGTGELGDRLIPKTINALSKYK----VIQVACGHDHSIALTNDGRIFSWGQNI 173
Query: 199 HAGQLGHSPVTVSSAS 214
H GQLG S AS
Sbjct: 174 H-GQLGLGKDISSQAS 188
>gi|320163137|gb|EFW40036.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 2579
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLK-----RASIKQVCMDKFHSVFVSDDGRVWS 85
VY WG N LG G R P +L L+ + I QV FH++F++D G VW+
Sbjct: 1550 VYAWGANGYGQLGLGDTDKRTKPTMLSRLEPVVMHESRIIQVACGYFHTLFLTDKGEVWA 1609
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
CG G G+LG+GS S+ + P + +K +G+A HSV L SG+++ G NS
Sbjct: 1610 CGWGAQGQLGVGSTSNALLPVHVKILDNKGIVGLAAGFC---HSVVLTESGTLYAFGGNS 1666
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV 186
+ QLG + + + S TP P + L + + CG F +
Sbjct: 1667 YGQLGAA--GTVLTSLTPFPVAGLADVH-VTWISCGTFQTA 1704
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF----------HSVFVSD 79
+VY WG++ N LG G D+ + + SL A + + M+ H+V +++
Sbjct: 1492 DVYTWGSSHNGQLGHG-----DMIDGVGSLPPARCETLHMNSNRIASISCGAEHTVAITN 1546
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLN-----FEKDKDKLGVAMASISQDHSVFLML 134
+G V++ G G+LGLG P L+ + + VA H++FL
Sbjct: 1547 EGMVYAWGANGYGQLGLGDTDKRTKPTMLSRLEPVVMHESRIIQVACGYF---HTLFLTD 1603
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREV 193
G V+ CG + QLG+ S+ + P + + ++ ++G+ G HSVV + S +
Sbjct: 1604 KGEVWACGWGAQGQLGVG-STSNALLPVHV---KILDNKGIVGLAAGFCHSVVLTESGTL 1659
Query: 194 YTFGIHA-GQLGHSPVTVSS 212
Y FG ++ GQLG + ++S
Sbjct: 1660 YAFGGNSYGQLGAAGTVLTS 1679
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 14/192 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ +G N LG GS +TR+ P + +LK I V +FH++ V+D +++S G G
Sbjct: 56 LFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGS 115
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G LG G E+ + P + +DKD V + + HS + +G +++ G NS QLG
Sbjct: 116 EGALGHGDETDLNMPTSIESLEDKD---VNIIACGGYHSAAITKNGELYIWGSNSEGQLG 172
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFG-IHAGQLGHSPV 208
L I PT L + +I V CG +H+ VV + ++YTFG G+LG
Sbjct: 173 LKNDT--ISYPT-----MLDLGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGD- 224
Query: 209 TVSSASVIEPKV 220
+ + V +PKV
Sbjct: 225 -IEAHKVTKPKV 235
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 15/197 (7%)
Query: 12 IDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDK 71
I H+ R ++ N++Y +G + LG G + ++P ++SL+ + +
Sbjct: 89 ITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGG 148
Query: 72 FHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHS 129
+HS ++ +G ++ G G+LGL ++ ++ P L+ LG ++ S++ H+
Sbjct: 149 YHSAAITKNGELYIWGSNSEGQLGLKND-TISYPTMLD-------LGKSVISVACGYYHT 200
Query: 130 VFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VY 188
+ G ++ G +LGL +H V+ P+ S ++ V CG H+V +
Sbjct: 201 AVVTADGKLYTFGETEGGKLGLGDIEAHKVTK---PKVVKGISGKVVKVACGGNHTVALT 257
Query: 189 SSREVYTFGI-HAGQLG 204
+S +VYTFG GQLG
Sbjct: 258 ASGQVYTFGSGQNGQLG 274
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+VY +G+ N LG GS+ ++P+L+++L + IK + + H+ VSD G +++ G
Sbjct: 261 QVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGD 320
Query: 89 GQGGRLGLGSES 100
G+ G+LG G ES
Sbjct: 321 GRHGKLGQGDES 332
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
++Y +G LG G + V P+++ + +K C H+V ++ G+V++ G
Sbjct: 208 KLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGN-HTVALTASGQVYTFG 266
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
GQ G+LGLGS+ + KL K K + + + H+ + G +F G
Sbjct: 267 SGQNGQLGLGSKIMDSNIPKLVEALSKRK--IKHIACGESHTAVVSDKGELFTFGDGRHG 324
Query: 148 QLGLSPPP-SHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR 191
+LG S++ P + R LK ++ + CG H++V ++
Sbjct: 325 KLGQGDESFSNLFKPVKVQR--LKEF-IVLHIACGGCHTIVACNK 366
>gi|170032403|ref|XP_001844071.1| E3 ubiquitin-protein ligase HECTD1 [Culex quinquefasciatus]
gi|167872357|gb|EDS35740.1| E3 ubiquitin-protein ligase HECTD1 [Culex quinquefasciatus]
Length = 2813
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
Q TI++++LPGFIFESNRGTKH+FTAET+LGP+F GW K K++RSK EA K +V+
Sbjct: 962 QVTILQDELPGFIFESNRGTKHTFTAETTLGPDFAAGWINTKKKKMRSKAEAQKYQVK 1019
>gi|157116683|ref|XP_001652833.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108876356|gb|EAT40581.1| AAEL007705-PA [Aedes aegypti]
Length = 2844
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 48/58 (82%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
Q TI++++LPGFIFESNRGTKH+FTAET+LGP+F GW K K++RSK EA K +V+
Sbjct: 857 QVTILQDELPGFIFESNRGTKHTFTAETTLGPDFAAGWINTKKKKMRSKAEAQKYQVK 914
>gi|119480145|ref|XP_001260101.1| BTB domain and ankyrin repeat protein [Neosartorya fischeri NRRL
181]
gi|119408255|gb|EAW18204.1| BTB domain and ankyrin repeat protein [Neosartorya fischeri NRRL
181]
Length = 1637
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 96/224 (42%), Gaps = 49/224 (21%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVP-----------------ELLDSL------------ 59
+EV+ +G+N N NLG G Q R P E LD
Sbjct: 254 DEVFTFGSNKNLNLGLGDQDDRQFPVRINLERPEHLLRRFYREFLDRQLDDGEPSSHQDV 313
Query: 60 ------------KRASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSP 105
K I+ + M K H+ ++DD ++ CG G GGRLG G E + S
Sbjct: 314 TRTAELPALIKNKPIKIQAIAMSKLHTAILTDDPESNLFLCGFGPGGRLGTGDEQTRFSF 373
Query: 106 KKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
+ K +++A + QDH++ + G VF G N + QLG S P + P+
Sbjct: 374 VCIETGGLAHKRVISVA-LGQDHTLAITAHGEVFSWGSNKYGQLGYSLPRTQNRDDVPMQ 432
Query: 166 RSSLKSSQP-----LIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
S + P ++GV HSVV+SS +YTFG + GQLG
Sbjct: 433 MSPRQIFNPFKKEVILGVAASAIHSVVFSSSGLYTFGKNEGQLG 476
>gi|6006862|gb|AAF00638.1|AC009540_15 unknown protein [Arabidopsis thaliana]
Length = 1073
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 116/231 (50%), Gaps = 37/231 (16%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD 70
P+ +I +++ V++ EV+ WG ANY LGTG+Q + VP +DSL IK V
Sbjct: 128 PVAQVIGEQQSSVAT----EVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAA 183
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLG------LGSESSVVSPKKLNFEKDKDKLG---VAM 121
KFHSV +S G V++ G G+GGRLG +++V++P+++ LG V
Sbjct: 184 KFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQV-----ISGLGSRRVKA 238
Query: 122 ASISQDHSVFLMLSGSVFVCGLNSFH----------QLGLSPPPSHIVSPTPIPRSSLKS 171
+ ++ H+V G V+ G N QLG + S TP +SLK+
Sbjct: 239 VAAAKHHTVIATEGGDVYTWGSNRESDVVCDALVEGQLGYT---SVDTQATPRKVTSLKA 295
Query: 172 SQPLIGVCCGRFHSVVYSS-REVYTFGIH-AGQLGHSPVTVSSASVIEPKV 220
++ V H+ V S EV+T+G + GQLG+ T +SAS P++
Sbjct: 296 K--IVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYG--TSNSASNYSPRL 342
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 23 VSSNQFNEVYIWGTNANYN----------LGTGSQQTRDVPELLDSLKRASIKQVCMDKF 72
V + + +VY WG+N + LG S T+ P + SLK A I V
Sbjct: 247 VIATEGGDVYTWGSNRESDVVCDALVEGQLGYTSVDTQATPRKVTSLK-AKIVAVSAANK 305
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSV--VSPKKLNFEKDK 114
H+ VSD G V++ G + G+LG G+ +S SP+ +++ K K
Sbjct: 306 HTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGK 349
>gi|426196409|gb|EKV46337.1| hypothetical protein AGABI2DRAFT_185787 [Agaricus bisporus var.
bisporus H97]
Length = 1484
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 98/219 (44%), Gaps = 38/219 (17%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRDVPELL--------DSLKRASI---------KQVCMD 70
+ ++Y WGTN N LG G R PEL L+R S+ + V M
Sbjct: 144 YADLYTWGTNVNAALGLGDSNDRAYPELAVLPRREDEADLERQSLSARFLPIKAEHVEMS 203
Query: 71 KFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--Q 126
K H+V V+ + G + CG G GGRLG S + + K +L A+ SI+ Q
Sbjct: 204 KLHTVVVTSETGGNLRVCGFGSGGRLGPNSHTQYLL-------KPLSQLTQAITSIALGQ 256
Query: 127 DHSVFLMLSGSVFVCGLNSFHQLGLS-PPPSHIVSPTPIPRSSLKSSQPL-----IGVCC 180
DH++ L +G V GLN F QLG PP+ PI S + PL GV
Sbjct: 257 DHTLALTKAGEVLSWGLNRFSQLGYPVDPPTSGRLEEPIQYSPRRVQGPLRKEVVKGVAA 316
Query: 181 GRFHSVVYSSREVYTFGIHAGQLGHS----PVTVSSASV 215
+ S ++ VYT+G + GQLG+ PV V V
Sbjct: 317 SKVASACWTDDGVYTWGTNNGQLGYDKAAQPVQVQPRKV 355
>gi|294659443|ref|XP_461818.2| DEHA2G06226p [Debaryomyces hansenii CBS767]
gi|199433966|emb|CAG90279.2| DEHA2G06226p [Debaryomyces hansenii CBS767]
Length = 1607
Score = 87.0 bits (214), Expect = 9e-15, Method: Composition-based stats.
Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 49/253 (19%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLD----------------SLKRASIKQVCMDKF 72
+++Y++G+N N NLG G R +P + L + + V + K
Sbjct: 199 SDIYMFGSNKNNNLGVGDATDRAIPSKISHECFKTKGIESQNIQTGLMKPRYRMVKISKN 258
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSE--SSVVSPKKLNF----EKDKD------KLGVA 120
HS+ ++ DG ++SCG G GRLG G ++ KK+NF E D+D + +
Sbjct: 259 HSIVLTYDGSLYSCGIGSRGRLGHGFNDLNNTFRFKKINFYEFNEDDEDNGQDHAEQVIK 318
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV--------------SPTPIPR 166
+IS +HS+ L ++ GLN+F+QLG + + P I
Sbjct: 319 DVAISSNHSIALNNENEIYSWGLNNFNQLGYTSSIASSSNSVSNKTFLEPFEGQPKEIIS 378
Query: 167 SSLKSSQ-PLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATII 225
LK +Q P+ G+ + HSV Y+ E++ +G+ GQ+G P+ S+ + IE KV TI
Sbjct: 379 GDLKRNQSPINGLAVSKIHSVAYTRNELFFWGLCIGQMG-IPID-STTTPIEHKVNNTIY 436
Query: 226 REDLPGFIFESNR 238
+ GFI S +
Sbjct: 437 K----GFIQRSPK 445
>gi|121710216|ref|XP_001272724.1| BTB domain and ankyrin repeat protein [Aspergillus clavatus NRRL 1]
gi|119400874|gb|EAW11298.1| BTB domain and ankyrin repeat protein [Aspergillus clavatus NRRL 1]
Length = 1658
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 99/232 (42%), Gaps = 65/232 (28%)
Query: 29 NEVYIWGTNANYNLGTGSQQTR-------------------------------------- 50
+EV+ +G+N N NLG G Q R
Sbjct: 254 DEVFTFGSNKNLNLGLGDQDDRQFPVRITLTRPEHLVRRFYREFQERQADEGTLNSHEDM 313
Query: 51 ----DVPELLDSLKRASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVS 104
D+P L+ S K I+ + M K H+ +++D ++ CG G GGRLG G ES+
Sbjct: 314 NRNADLPILIKS-KPIKIQSIAMSKLHTAVLTNDPESNLFLCGFGPGGRLGTGDEST--- 369
Query: 105 PKKLNFE-------KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSH 157
+ NF + + VA+ QDH++ L G VF G N F QLG S P +
Sbjct: 370 --RFNFVCIETGGLAHRKVISVALG---QDHTLALTEHGEVFSWGSNKFGQLGYSLPRTQ 424
Query: 158 IVSPTPIPRSSLKSSQP-----LIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
PI S + P ++GV HSVV+S+ +YTFG + GQLG
Sbjct: 425 NRDDVPIQTSPRQIFNPFKKEVILGVAASAIHSVVFSTSGLYTFGKNEGQLG 476
>gi|320580374|gb|EFW94597.1| hypothetical protein HPODL_4097 [Ogataea parapolymorpha DL-1]
Length = 1214
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 94/173 (54%), Gaps = 22/173 (12%)
Query: 50 RDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGR--VWSCGHGQGGRLGLGS----ESSV 102
RD+ P L + + I+ V M K HS+ ++ + R ++ G G GRLGLG+ ++ V
Sbjct: 30 RDIYPSLSERISFPRIRDVKMSKHHSIVLTTEPRANIFVKGLGTRGRLGLGNGQPQDAFV 89
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPP--PSHIVS 160
P FE ++ V A +S DHS+ L + G+V+ GLNS+ QLG P +
Sbjct: 90 GIPA---FENER----VLFADVSNDHSICLTVDGNVYTWGLNSYGQLGYQVDLLPHQTEA 142
Query: 161 PTPIPR----SSLK--SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSP 207
IP+ LK ++ ++GV C +FHS+VY+ E+Y +G++ GQ G SP
Sbjct: 143 CVSIPKLVNTGDLKKQTNCQILGVSCSKFHSLVYTKNEIYFWGLNVGQFGFSP 195
>gi|391330534|ref|XP_003739715.1| PREDICTED: E3 ubiquitin-protein ligase HECTD1-like [Metaseiulus
occidentalis]
Length = 2249
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 49/58 (84%), Gaps = 1/58 (1%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFG-GGWTGKKGKRLRSKLEAVKQKV 277
QAT+++EDLPGFIFESNRGTKH+FTAET LG +FG G K KRL++KLEAVKQKV
Sbjct: 757 QATVLKEDLPGFIFESNRGTKHTFTAETLLGSDFGCASRVGGKSKRLQTKLEAVKQKV 814
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG + LG G+++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+S G + G+LGLG E SP+ + K LG+ A I+ HS L LSG++
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQTSPQMI-----KSLLGIPFAQIAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYV---PTLLKSLR-SQKVVHICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E + P+ + D + S + H++ L G V+ GL + QLGL
Sbjct: 64 GQ--LGHEKARKRPEHVG---ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLG 204
+ P I SL Q ++ V CG +HS+ S EV+++G + GQLG
Sbjct: 119 PGTEECVRVPRNI--RSLSEIQ-IVQVACGYYHSLALSKGSEVFSWGQNKYGQLG 170
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG R VP LL SL+ + +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S S ++P+K+ FE +G + I+ Q + F+ SG ++ GL
Sbjct: 271 YGQLGHNSTSHEINPRKV-FE----LMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNG 325
Query: 148 QLG 150
QLG
Sbjct: 326 QLG 328
>gi|350631246|gb|EHA19617.1| BTB/POZ protein [Aspergillus niger ATCC 1015]
Length = 1659
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 51/225 (22%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS------------------------- 63
+EV+ +G+N N NLG G Q R PE + +LKR
Sbjct: 255 DEVFTFGSNKNLNLGVGDQDDRQYPERV-TLKRPEHLLQRFYREFLEQRSDDDRFDSDQE 313
Query: 64 -----------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVS 104
I+ + M K H+ ++ D ++ CG G GGRLG G ES+ S
Sbjct: 314 SGHQTDLPALVKNKPIKIQNIVMSKLHTAILTTDPESNLFLCGFGPGGRLGTGDESTRFS 373
Query: 105 PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI 164
++ ++ +++A + QDH++ + G +F G N + QLG S P S+ PI
Sbjct: 374 FVCIDSGGLVNRRVISVA-LGQDHTLAITDRGEIFSWGSNKYGQLGYSLPRSNNRDDVPI 432
Query: 165 PRSSLKSSQP-----LIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
S + P ++G HSVV+S+ +YTFG + GQLG
Sbjct: 433 QNSPRQIFNPFKKEAILGAAASAIHSVVFSTSGLYTFGKNEGQLG 477
>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
CCMP2712]
Length = 316
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 7/178 (3%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV WG N GTG+Q+ + P + SL + V H+V VS+DGRV+S G
Sbjct: 48 GEVLCWGENKYGQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGL 107
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG GS ++ +P + + +D L V + H+V ++ G ++ CG N Q
Sbjct: 108 GANGQLGHGSRDNLTTPSVVQAMRGRDVLAV---TCGVGHTVIVLAGGELYTCGWNKNGQ 164
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLGH 205
G+ S ++SP + SL+ C +VV EV+TFG GQLGH
Sbjct: 165 CGVG-STSDLLSPQCVE--SLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGH 219
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E+Y G N N G GS P+ ++SL+ ++ H+ V+ G V++ G
Sbjct: 152 GELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGS 211
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSF 146
G G+LG G + P+++ +G+ M+ ++ ++++V VF GLN+
Sbjct: 212 GSCGQLGHGDCQDLSMPRRVG-----ALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNV 266
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVC 179
QLG S SH P LK + + C
Sbjct: 267 GQLGAS-STSHPYLSEPRQMEFLKEEEVELCKC 298
>gi|226292063|gb|EEH47483.1| BTB domain and ankyrin repeat protein [Paracoccidioides
brasiliensis Pb18]
Length = 1695
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 100/227 (44%), Gaps = 52/227 (22%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLD------------------------------- 57
+EV+ +G+N N NLG G + R PE +
Sbjct: 248 DEVFTFGSNKNLNLGLGDEGDRQFPERISLTRPDHLLYTFHREYEAIRAARTGSDPGSVQ 307
Query: 58 ----------SLKRA---SIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSV 102
+L RA S +Q+ M K H+ +++D ++ CG G GGRLG G E++
Sbjct: 308 PDISSVTEIPTLVRARPISFRQIVMSKLHTGILTNDPVSNLFVCGFGPGGRLGTGDENTR 367
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
S + K VA+A + QDHS+ + G VF G N + QLG + P ++ +
Sbjct: 368 FSFVCIEGGGLAGKKVVALA-LGQDHSIAISEQGEVFSWGSNKYGQLGYTLPQTNKKNDV 426
Query: 163 PIPRSSLKSSQPL-----IGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
PI + + PL IG HSVV++ +YTFG + GQLG
Sbjct: 427 PIQTTPRQIFNPLKKEAIIGAAASSIHSVVFTPTSLYTFGKNEGQLG 473
>gi|344234752|gb|EGV66620.1| hypothetical protein CANTEDRAFT_91790 [Candida tenuis ATCC 10573]
Length = 1501
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 31/204 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELL-----------DSLKRASIKQVCMDKFHSVFVS 78
++Y++G+N N NLG G R +P L D L + K V + K HSV ++
Sbjct: 202 DIYMFGSNLNNNLGVGDSTDRHIPSKLMNSTFCEEDSQDYLDQPRFKAVKLSKNHSVILT 261
Query: 79 DDGRVWSCGHGQGGRLGLGSESSVVSP--KKLN-FEKDKDKLGVAMASISQDHSVFLMLS 135
DG ++SCG G GRLG G ++ S KK+ F +K V SIS DH++ + S
Sbjct: 262 KDGSLYSCGIGSRGRLGHGIDNMNNSYRFKKIEFFVGQTEKKIVKDFSISTDHTLAVTTS 321
Query: 136 GSVFVCGLNSFHQLG--------------LSPPPSHIVSPTPIPRSSL-KSSQPLIGVCC 180
VF GLNS+ Q+G S P P + L K+S + G
Sbjct: 322 NEVFAWGLNSYGQIGYKSINNSNTNTSKEFSEPFE--AEPRLVYGGDLKKNSLNIRGTAA 379
Query: 181 GRFHSVVYSSREVYTFGIHAGQLG 204
+ HS+VY+ +++ +G++ GQ+G
Sbjct: 380 SKIHSLVYTKFDIFFWGLNIGQMG 403
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 119/249 (47%), Gaps = 25/249 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG + LG +G+++ VP + SL I QV FHS+ +S
Sbjct: 97 LALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+S G + G+LGLG E SP+ + K LG+ A I+ HS L LSG+V
Sbjct: 157 EVFSWGQNKYGQLGLGYEYKKQASPQII-----KSLLGIPFAQIAAGGAHSFVLTLSGAV 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ + CG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYISCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEF 254
GQLGH+ S+A I P+ + E + + + G +H+ F T F
Sbjct: 268 AGGYGQLGHN----STAHEINPRK----VFELMGNIVTQIACGRQHTSAFVPSTGRIYSF 319
Query: 255 GGGWTGKKG 263
G G G+ G
Sbjct: 320 GLGGNGQLG 328
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG + R VP LL SL+ I + + H+ ++ +G V++ G G
Sbjct: 211 VFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S + ++P+K+ FE + +A Q S F+ +G ++ GL QLG
Sbjct: 271 YGQLGHNSTAHEINPRKV-FEL-MGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328
Query: 151 LSPPPSHIVSPTPI 164
+ S+ SP P+
Sbjct: 329 MG-TTSNRKSPFPV 341
>gi|159129014|gb|EDP54128.1| BTB domain and ankyrin repeat protein [Aspergillus fumigatus A1163]
Length = 1655
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 94/224 (41%), Gaps = 49/224 (21%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVP-----------------ELLDSL------------ 59
+EV+ +G+N N NLG G Q R P E LD
Sbjct: 254 DEVFTFGSNKNLNLGLGDQDDRQFPVRINLERPEHLLRRFYREFLDRQSDDGEPSSQQDV 313
Query: 60 ------------KRASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSP 105
K I+ + M K H+ ++DD ++ CG G GGRLG G E +
Sbjct: 314 TRTAELPALIKNKPIKIQAIAMSKLHTAIITDDPESNLFLCGFGPGGRLGTGDEQTRFGF 373
Query: 106 KKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
+ K +A+A + QDH++ + G VF G N + QLG S P P+
Sbjct: 374 VCIETGGLARKRVIAVA-LGQDHTLAITAHGEVFSWGSNKYGQLGYSLPRMQNRDDVPMQ 432
Query: 166 RSSLKSSQP-----LIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
S + P ++GV HSVV+SS +YTFG + GQLG
Sbjct: 433 MSPRQIFNPFKKEVILGVAASAIHSVVFSSSGLYTFGKNEGQLG 476
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 121/249 (48%), Gaps = 25/249 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLG--PEF 254
GQLGH+ S++ I P+ + E + + E G +H+ T S G F
Sbjct: 268 AGGYGQLGHN----STSHEINPRK----VFELMGSIVTEIACGRQHTSTFVPSSGRIYSF 319
Query: 255 GGGWTGKKG 263
G G G+ G
Sbjct: 320 GLGGNGQLG 328
>gi|70989515|ref|XP_749607.1| BTB domain and ankyrin repeat protein [Aspergillus fumigatus Af293]
gi|66847238|gb|EAL87569.1| BTB domain and ankyrin repeat protein [Aspergillus fumigatus Af293]
Length = 1655
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 94/224 (41%), Gaps = 49/224 (21%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVP-----------------ELLDSL------------ 59
+EV+ +G+N N NLG G Q R P E LD
Sbjct: 254 DEVFTFGSNKNLNLGLGDQDDRQFPVRINLERPEHLLRRFYREFLDRQSDDGEPSSQQDV 313
Query: 60 ------------KRASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSP 105
K I+ + M K H+ ++DD ++ CG G GGRLG G E +
Sbjct: 314 TRTAELPALIKNKPIKIQAIAMSKLHTAIITDDPESNLFLCGFGPGGRLGTGDEQTRFGF 373
Query: 106 KKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
+ K +A+A + QDH++ + G VF G N + QLG S P P+
Sbjct: 374 VCIETGGLARKRVIAVA-LGQDHTLAITAHGEVFSWGSNKYGQLGYSLPRMQNRDDVPMQ 432
Query: 166 RSSLKSSQP-----LIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
S + P ++GV HSVV+SS +YTFG + GQLG
Sbjct: 433 MSPRQIFNPFKKEVILGVAASAIHSVVFSSSGLYTFGKNEGQLG 476
>gi|317032820|ref|XP_001394437.2| BTB domain and ankyrin repeat protein [Aspergillus niger CBS
513.88]
Length = 1631
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 51/225 (22%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS------------------------- 63
+EV+ +G+N N NLG G Q R PE + +LKR
Sbjct: 241 DEVFTFGSNKNLNLGVGDQDDRQYPERV-TLKRPEHLLQRFYREFLEQRSDDDRFDSDQE 299
Query: 64 -----------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVS 104
I+ + M K H+ ++ D ++ CG G GGRLG G ES+ S
Sbjct: 300 SGHQTDLPALVKNKPIKIQNIVMSKLHTAILTTDPESNLFLCGFGPGGRLGTGDESTRFS 359
Query: 105 PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI 164
++ ++ + +A + QDH++ + G +F G N + QLG S P S+ PI
Sbjct: 360 FVCIDSGGLVNRRVIYVA-LGQDHTLAITDRGEIFSWGSNKYGQLGYSLPRSNNRDDVPI 418
Query: 165 PRSSLKSSQP-----LIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
S + P ++G HSVV+S+ +YTFG + GQLG
Sbjct: 419 QNSPRQIFNPFKKEAILGAAASAIHSVVFSTSGLYTFGKNEGQLG 463
>gi|302687690|ref|XP_003033525.1| hypothetical protein SCHCODRAFT_67657 [Schizophyllum commune H4-8]
gi|300107219|gb|EFI98622.1| hypothetical protein SCHCODRAFT_67657 [Schizophyllum commune H4-8]
Length = 1428
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPE--LLDSLK----------RASIKQVCMD 70
+ ++ E++ WG N N LG G+ R PE ++ +L+ A I + M
Sbjct: 150 IPNDSRAELFTWGINKNAALGLGNGDDRVYPESVVIPALRGVPPDDRRFLPAHIHAIHMS 209
Query: 71 KFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDH 128
K H+ ++++ + CG G GGRLG G + S + L+ L +A ++ QDH
Sbjct: 210 KLHTAVITNEPASNIRVCGFGSGGRLGPGQHTLQYSFQPLH--SSVPSLSIASTALGQDH 267
Query: 129 SVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI---PRSSLKS--SQPLIGVCCGRF 183
++ L +SG V GLN F QLG + + PI PR + + + + G+ +
Sbjct: 268 TLVLTISGEVLSWGLNRFAQLGYVVEVTGPFTQEPIQVTPRRIMGALRKETVGGIAAAKT 327
Query: 184 HSVVYSSREVYTFGIHAGQLGHS-PVTV 210
S +++ EVYT+G ++GQLG+ PV V
Sbjct: 328 CSACWTAEEVYTWGTNSGQLGYDQPVQV 355
>gi|134079120|emb|CAK45932.1| unnamed protein product [Aspergillus niger]
Length = 1587
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 51/225 (22%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS------------------------- 63
+EV+ +G+N N NLG G Q R PE + +LKR
Sbjct: 197 DEVFTFGSNKNLNLGVGDQDDRQYPERV-TLKRPEHLLQRFYREFLEQRSDDDRFDSDQE 255
Query: 64 -----------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVS 104
I+ + M K H+ ++ D ++ CG G GGRLG G ES+ S
Sbjct: 256 SGHQTDLPALVKNKPIKIQNIVMSKLHTAILTTDPESNLFLCGFGPGGRLGTGDESTRFS 315
Query: 105 PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI 164
++ ++ + +A + QDH++ + G +F G N + QLG S P S+ PI
Sbjct: 316 FVCIDSGGLVNRRVIYVA-LGQDHTLAITDRGEIFSWGSNKYGQLGYSLPRSNNRDDVPI 374
Query: 165 PRSSLKSSQP-----LIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
S + P ++G HSVV+S+ +YTFG + GQLG
Sbjct: 375 QNSPRQIFNPFKKEAILGAAASAIHSVVFSTSGLYTFGKNEGQLG 419
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 120/249 (48%), Gaps = 25/249 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEF 254
GQLGH+ S++ I P+ + E + + E G +H+ F + F
Sbjct: 268 AGGYGQLGHN----STSHEINPRK----VFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 319
Query: 255 GGGWTGKKG 263
G G G+ G
Sbjct: 320 GLGGNGQLG 328
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D I+ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 VGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 120/249 (48%), Gaps = 25/249 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEF 254
GQLGH+ S++ I P+ + E + + E G +H+ F + F
Sbjct: 268 AGGYGQLGHN----STSHEINPRK----VFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 319
Query: 255 GGGWTGKKG 263
G G G+ G
Sbjct: 320 GLGGNGQLG 328
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 120/249 (48%), Gaps = 25/249 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEF 254
GQLGH+ S++ I P+ + E + + E G +H+ F + F
Sbjct: 268 AGGYGQLGHN----STSHEINPRK----VFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 319
Query: 255 GGGWTGKKG 263
G G G+ G
Sbjct: 320 GLGGNGQLG 328
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D I+ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 VGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 120/249 (48%), Gaps = 25/249 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEF 254
GQLGH+ S++ I P+ + E + + E G +H+ F + F
Sbjct: 268 AGGYGQLGHN----STSHEINPRK----VFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 319
Query: 255 GGGWTGKKG 263
G G G+ G
Sbjct: 320 GLGGNGQLG 328
>gi|328852717|gb|EGG01861.1| hypothetical protein MELLADRAFT_91837 [Melampsora larici-populina
98AG31]
Length = 1665
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 49/223 (21%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPE------------------LLDSLKRASIKQVCMDK 71
E++ WG N N+ LG Q R PE +++ + V M +
Sbjct: 198 ELFTWGNNRNFVLGI--QGDRAHPERIHLKHPPHPNQPSSSSSQINAFLPIPVSVVAMCR 255
Query: 72 FHSVFVSDDGRVWSCGHGQGGRLGLG------------SESSVVSPKKLNFEKDKDKL-- 117
H+ V+ G +W CG G GGRLGLG +++ + +L F + K L
Sbjct: 256 LHTAVVTTTGELWICGFGSGGRLGLGWCNNKQPTGTQVHNNNITAQTQLTFARVKGALMN 315
Query: 118 -GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL--------------SPPPSHIVSPT 162
V ++ QDH++ + +G ++ CGLN F QLG S + ++
Sbjct: 316 QRVKSVALGQDHTIIVTEAGHLYSCGLNRFGQLGYGADTMETPEYAAANSSSTNEVIQAD 375
Query: 163 PIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
P + ++G ++HS +++ +YT+G H GQLG+
Sbjct: 376 PKRVLGPLKKEIVLGAAASKWHSACFTADALYTWGAHQGQLGY 418
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 120/249 (48%), Gaps = 25/249 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEF 254
GQLGH+ S++ I P+ + E + + E G +H+ F + F
Sbjct: 268 AGGYGQLGHN----STSHEINPRK----VFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 319
Query: 255 GGGWTGKKG 263
G G G+ G
Sbjct: 320 GLGGNGQLG 328
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D I+ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 VGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 120/249 (48%), Gaps = 25/249 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEF 254
GQLGH+ S++ I P+ + E + + E G +H+ F + F
Sbjct: 268 AGGYGQLGHN----STSHEINPRK----VFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 319
Query: 255 GGGWTGKKG 263
G G G+ G
Sbjct: 320 GLGGNGQLG 328
>gi|83767344|dbj|BAE57483.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1593
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 48/223 (21%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL-----DSL------------------------ 59
+EV+ +G+N N NLG G Q R PE + D L
Sbjct: 254 DEVFTFGSNKNLNLGVGDQDDRQYPERITFRRPDHLLQRFFSDFQEQQLDEGSSDFQQVR 313
Query: 60 -----------KRASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPK 106
K I+ + M K H+ +++D ++ CG G GGRLG G ES+ S
Sbjct: 314 GVTDLPALIKNKPIKIQNIAMSKLHTAILTNDPESNLFLCGFGPGGRLGTGDESTRFSFV 373
Query: 107 KLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR 166
+ K +++A + QDH++ + +G +F G N F QLG P ++ P+ +
Sbjct: 374 CIETGGLASKKVISVA-LGQDHTLAITENGEIFSWGSNKFGQLGYGLPRTNNRDDVPMQK 432
Query: 167 SSLKSSQP-----LIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ + P ++G HSVV+S+ +YTFG + GQLG
Sbjct: 433 TPRQIFNPFKKETILGAAASAIHSVVFSNFGLYTFGKNEGQLG 475
>gi|317143449|ref|XP_001819485.2| BTB domain and ankyrin repeat protein [Aspergillus oryzae RIB40]
gi|391864043|gb|EIT73341.1| hypothetical protein Ao3042_10681 [Aspergillus oryzae 3.042]
Length = 1634
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 48/223 (21%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL-----DSL------------------------ 59
+EV+ +G+N N NLG G Q R PE + D L
Sbjct: 254 DEVFTFGSNKNLNLGVGDQDDRQYPERITFRRPDHLLQRFFSDFQEQQLDEGSSDFQQVR 313
Query: 60 -----------KRASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPK 106
K I+ + M K H+ +++D ++ CG G GGRLG G ES+ S
Sbjct: 314 GVTDLPALIKNKPIKIQNIAMSKLHTAILTNDPESNLFLCGFGPGGRLGTGDESTRFSFV 373
Query: 107 KLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR 166
+ K +++A + QDH++ + +G +F G N F QLG P ++ P+ +
Sbjct: 374 CIETGGLASKKVISVA-LGQDHTLAITENGEIFSWGSNKFGQLGYGLPRTNNRDDVPMQK 432
Query: 167 SSLKSSQP-----LIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ + P ++G HSVV+S+ +YTFG + GQLG
Sbjct: 433 TPRQIFNPFKKETILGAAASAIHSVVFSNFGLYTFGKNEGQLG 475
>gi|238487624|ref|XP_002375050.1| BTB domain and ankyrin repeat protein [Aspergillus flavus NRRL3357]
gi|220699929|gb|EED56268.1| BTB domain and ankyrin repeat protein [Aspergillus flavus NRRL3357]
Length = 1634
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 48/223 (21%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL-----DSL------------------------ 59
+EV+ +G+N N NLG G Q R PE + D L
Sbjct: 254 DEVFTFGSNKNLNLGVGDQDDRQYPERITFRRPDHLLQRFFSDFQEQQLDEGSSDFQQVR 313
Query: 60 -----------KRASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPK 106
K I+ + M K H+ +++D ++ CG G GGRLG G ES+ S
Sbjct: 314 GVTDLPALIKNKPIKIQNIAMSKLHTAILTNDPESNLFLCGFGPGGRLGTGDESTRFSFV 373
Query: 107 KLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR 166
+ K +++A + QDH++ + +G +F G N F QLG P ++ P+ +
Sbjct: 374 CIETGGLASKKVISVA-LGQDHTLAITENGEIFSWGSNKFGQLGYGLPRTNNRDDVPMQK 432
Query: 167 SSLKSSQP-----LIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ + P ++G HSVV+S+ +YTFG + GQLG
Sbjct: 433 TPRQIFNPFKKETILGAAASAIHSVVFSNFGLYTFGKNEGQLG 475
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 106/202 (52%), Gaps = 8/202 (3%)
Query: 31 VYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG + LG G ++T +P+ + +L I QV +HSV +S+DG+V+S G
Sbjct: 96 VFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTN 155
Query: 90 QGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG E S SP+++ + + + +A + HS L LSG+ F G NS Q
Sbjct: 156 SHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHS 206
L LS + + P+ +LK + ++ + CG H+ V + +V+TFG ++ GQLGH
Sbjct: 213 LALSGNNAPVQRYKPVSIGALK-TLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 207 PVTVSSASVIEPKVQATIIRED 228
P + +++ + + D
Sbjct: 272 PTAEKRGPQLVERIEGLVSQID 293
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 8/203 (3%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
V+ ++ +V+ WGTN++ LG G + ++ P+ + SL+ + QV HS +S G
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSG 200
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
+ G G+L L ++ V K LGV S H+ L G VF
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV--VYSSREVYTFGIH 199
G NS+ QLG P + P + R SQ + CG H++ +Y++ +V +FG
Sbjct: 261 GDNSYGQLG-HDPTAEKRGPQLVERIEGLVSQ----IDCGSDHTLAYIYTTGQVVSFGRG 315
Query: 200 AGQLGHSPVTVSSASVIEPKVQA 222
G SP + +S I V A
Sbjct: 316 PGCASRSPHPGAESSDISCLVSA 338
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 16/197 (8%)
Query: 63 SIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMA 122
++ Q + HS+ + DG V SCG G+LG P+++ + L VA+
Sbjct: 24 TLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI---PALETLNVALV 80
Query: 123 SISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGR 182
S ++HS+ + G VF G S QLG+ P I + +I V CG
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI---KTLAGIKIIQVACGH 137
Query: 183 FHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGT 240
+HSV S +V+++G ++ GQLG S AS P+ ++ E +P + + G
Sbjct: 138 YHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP--LAQVAAGG 190
Query: 241 KHSFTAETSLGPEFGGG 257
HSF S G FG G
Sbjct: 191 HHSFALSLS-GTSFGWG 206
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 35 GTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRL 94
G N+ LG + PE + +L+ ++ V K HS+ V GRV++ G G+L
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 95 GLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
G+G + + PKK+ K + + + HSV L G VF G NS QLGL
Sbjct: 108 GIGEFKETTFIPKKI---KTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGK 164
Query: 154 PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLGHS 206
SP + SL+ PL V G HS S S + +G + AGQL S
Sbjct: 165 EFPSQASPQRV--RSLEGI-PLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALS 216
>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
familiaris]
Length = 1015
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 31 VYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG + LGTG ++T +P + +L IKQV +HS+ +S+ G+V+S G
Sbjct: 96 VFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSN 155
Query: 90 QGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + S SP+++ + D + +A + HS L LSG+ F G N+ Q
Sbjct: 156 SDGQLGLGKKFPSQASPQRV---RSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHS 206
L L S P S+LK + +I + CG H+VV + +V+TFG + GQLGHS
Sbjct: 213 LALHKNNVSGQSYKPYSISALK-NLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHS 271
Query: 207 PVTVSS 212
P S
Sbjct: 272 PTAEKS 277
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 18/197 (9%)
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
++Q + HS+ + +G+V SCG G+LG K++ + + L V + S
Sbjct: 25 LRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRI---RALETLHVDLVS 81
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR-SSLKSSQPLIGVCCGR 182
++HS+ + G VF G S QLG + P I + +K Q V CG
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQ----VSCGH 137
Query: 183 FHSVVYSS-REVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGT 240
+HS+ S +V+++G ++ GQLG S AS P+ ++ + +P + + G
Sbjct: 138 YHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQAS---PQRVRSL--DGIP--LAQVAAGG 190
Query: 241 KHSFTAETSLGPEFGGG 257
HSF S G FG G
Sbjct: 191 AHSFALSLS-GTSFGWG 206
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SPK L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQASPKLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLADIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDC 175
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
AS PK+ +++ +P + G HSF S G FG G
Sbjct: 176 KKQAS---PKLLKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 106/202 (52%), Gaps = 8/202 (3%)
Query: 31 VYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG + LG G ++T +P+ + +L I QV +HSV +S+DG+V+S G
Sbjct: 96 VFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTN 155
Query: 90 QGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG E S SP+++ + + + +A + HS L LSG+ F G NS Q
Sbjct: 156 SHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHS 206
L LS + + P+ +LK + ++ + CG H+ V + +V+TFG ++ GQLGH
Sbjct: 213 LALSGNNAPVQRYKPVSIGALK-TLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 207 PVTVSSASVIEPKVQATIIRED 228
P + +++ + + D
Sbjct: 272 PTAEKRGPQLVERIEGLVSQID 293
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 8/203 (3%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
V+ ++ +V+ WGTN++ LG G + ++ P+ + SL+ + QV HS +S G
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSG 200
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
+ G G+L L ++ V K LGV S H+ L G VF
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV--VYSSREVYTFGIH 199
G NS+ QLG P + P + R SQ + CG H++ +Y++ +V +FG
Sbjct: 261 GDNSYGQLG-HDPTAEKRGPQLVERIEGLVSQ----IDCGSDHTLAYIYTTGQVVSFGRG 315
Query: 200 AGQLGHSPVTVSSASVIEPKVQA 222
G SP + +S I V A
Sbjct: 316 PGCASRSPHPGAESSDISCLVSA 338
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 16/197 (8%)
Query: 63 SIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMA 122
++ Q + HS+ + DG V SCG G+LG P+++ + L VA+
Sbjct: 24 TLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI---PALETLNVALV 80
Query: 123 SISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGR 182
S ++HS+ + G VF G S QLG+ P I + +I V CG
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI---KTLAGIKIIQVACGH 137
Query: 183 FHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGT 240
+HSV S +V+++G ++ GQLG S AS P+ ++ E +P + + G
Sbjct: 138 YHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP--LAQVAAGG 190
Query: 241 KHSFTAETSLGPEFGGG 257
HSF S G FG G
Sbjct: 191 HHSFALSLS-GTSFGWG 206
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 35 GTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRL 94
G N+ LG + PE + +L+ ++ V K HS+ V GRV++ G G+L
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 95 GLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
G+G + + PKK+ K + + + HSV L G VF G NS QLGL
Sbjct: 108 GIGEFKETTFIPKKI---KTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGK 164
Query: 154 PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLGHS 206
SP + SL+ PL V G HS S S + +G + AGQL S
Sbjct: 165 EFPSQASPQRV--RSLEGI-PLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALS 216
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SPK L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQASPKLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLADIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDC 175
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
AS PK+ +++ +P + G HSF S G FG G
Sbjct: 176 KKQAS---PKLLKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG + + LG G+++ VP + SL I Q+ +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+S G + G+LGLG E S +L K LG+ ++ HS L LSG++F
Sbjct: 157 EVFSWGQNKHGQLGLGFELKSQSAPQL----IKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRFV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL++ QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLG 204
+I P I SL Q ++ + CG +HS+ S EV+++G + GQLG
Sbjct: 119 PGTEEYIKVPRNI--KSLTDIQ-IVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 106/202 (52%), Gaps = 8/202 (3%)
Query: 31 VYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG + LG G ++T +P+ + +L I QV +HSV +S+DG+V+S G
Sbjct: 96 VFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTN 155
Query: 90 QGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG E S SP+++ + + + +A + HS L LSG+ F G NS Q
Sbjct: 156 SHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHS 206
L LS + + P+ +LK + ++ + CG H+ V + +V+TFG ++ GQLGH
Sbjct: 213 LALSGNNAPVQRYKPVSIGALK-TLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 207 PVTVSSASVIEPKVQATIIRED 228
P + +++ + + D
Sbjct: 272 PTAEKRGPQLVERIEGLVSQID 293
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 8/203 (3%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
V+ ++ +V+ WGTN++ LG G + ++ P+ + SL+ + QV HS +S G
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSG 200
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
+ G G+L L ++ V K LGV S H+ L G VF
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV--VYSSREVYTFGIH 199
G NS+ QLG P + P + R SQ + CG H++ +Y++ +V +FG
Sbjct: 261 GDNSYGQLG-HDPTAEKRGPQLVERIEGLVSQ----IDCGSDHTLAYIYTTGQVVSFGRG 315
Query: 200 AGQLGHSPVTVSSASVIEPKVQA 222
G SP + +S I V A
Sbjct: 316 PGCASRSPHPGAESSDISCLVSA 338
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 16/197 (8%)
Query: 63 SIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMA 122
++ Q + HS+ + DG V SCG G+LG P+++ + L VA+
Sbjct: 24 TLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI---PALETLNVALV 80
Query: 123 SISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGR 182
S ++HS+ + G VF G S QLG+ P I + +I V CG
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI---KTLAGIKIIQVACGH 137
Query: 183 FHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGT 240
+HSV S +V+++G ++ GQLG S AS P+ ++ E +P + + G
Sbjct: 138 YHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP--LAQVAAGG 190
Query: 241 KHSFTAETSLGPEFGGG 257
HSF S G FG G
Sbjct: 191 HHSFALSLS-GTSFGWG 206
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 35 GTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRL 94
G N+ LG + PE + +L+ ++ V K HS+ V GRV++ G G+L
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 95 GLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
G+G + + PKK+ K + + + HSV L G VF G NS QLGL
Sbjct: 108 GIGEFKETTFIPKKI---KTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGK 164
Query: 154 PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLGHS 206
SP + SL+ PL V G HS S S + +G + AGQL S
Sbjct: 165 EFPSQASPQRV--RSLEGI-PLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALS 216
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG + + LG G+++ VP + SL I Q+ +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+S G + G+LGLG E S +L K LG+ ++ HS L LSG++F
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQL----IKSLLGIPFTQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRFV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL++ QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLG 204
+I P I SL Q ++ + CG +HS+ S EV+++G + GQLG
Sbjct: 119 PGTEEYIRVPRNI--KSLTDIQ-IVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|194761724|ref|XP_001963078.1| GF14121 [Drosophila ananassae]
gi|190616775|gb|EDV32299.1| GF14121 [Drosophila ananassae]
Length = 2704
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 46/58 (79%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
Q T++++DLPGFIFESNRGTKH+FTAET LGP+F GW+ K KR +SK E K +VR
Sbjct: 814 QVTVLQDDLPGFIFESNRGTKHTFTAETVLGPDFASGWSTAKKKRNKSKTEGQKFQVR 871
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG + + LG G+++ VP + SL I Q+ +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+S G + G+LGLG E S +L K LG+ ++ HS L LSG++F
Sbjct: 157 EVFSWGQNKHGQLGLGFELKSQSAPQL----IKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRFV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL++ QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLG 204
+I P I SL Q ++ + CG +HS+ S EV+++G + GQLG
Sbjct: 119 PGTEEYIKVPRNI--KSLTDIQ-IVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG + + LG G+++ VP + SL I Q+ +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+S G + G+LGLG E S +L K LG+ ++ HS L LSG++F
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQL----IKSLLGIPFTQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRFV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL++ QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLG 204
+I P I SL Q ++ + CG +HS+ S EV+++G + GQLG
Sbjct: 119 PGTEEYIRVPRNI--KSLTDIQ-IVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 23/248 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG + LG G+++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+S G + G+LGLG E K+ + K LG+ A I+ HS L LSG++F
Sbjct: 157 EVFSWGQNKYGQLGLGYEYK----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDDNDRYV---PTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEFG 255
GQLGH+ S++ I P+ + E + + + G +H+ F + FG
Sbjct: 269 GGYGQLGHN----STSHEINPRK----VFELMGSLVTQITCGRQHTTAFVPSSGRIYSFG 320
Query: 256 GGWTGKKG 263
G G+ G
Sbjct: 321 LGGNGQLG 328
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D I+ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E + P+ + D + S + H++ L G V+ GL + QLGL
Sbjct: 64 GQ--LGHEKARKRPEHVG---ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLG 204
I P I SL Q ++ V CG +HS+ S EV+++G + GQLG
Sbjct: 119 PGTEECIRVPRNI--KSLSEIQ-IVQVACGYYHSLALSKGSEVFSWGQNKYGQLG 170
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG + + LG G+++ VP + SL I Q+ +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+S G + G+LGLG E S +L K LG+ ++ HS L LSG++F
Sbjct: 157 EVFSWGQNKHGQLGLGFELKRQSSPQL----IKSLLGIPFTQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRFV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL++ QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLG 204
+I P I SL Q ++ + CG +HS+ S EV+++G + GQLG
Sbjct: 119 PGTEEYIRVPRNI--KSLTDIQ-IVQIACGYYHSLALSKGSEVFSWGQNKHGQLG 170
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG + + LG G+++ VP + SL I QV +HS+ +S
Sbjct: 46 LALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKGS 105
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+S G + G+LGLG E SP+ + K LG+ I+ HS L LSG++
Sbjct: 106 EVFSWGQNKYGQLGLGFEFKKQTSPQLI-----KSLLGIPFMQIAAGGAHSFVLTLSGAI 160
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 161 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 216
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 217 AGGYGQLGHN----STSHEINPR 235
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 160 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 219
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 220 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 277
>gi|158288303|ref|XP_310184.4| AGAP009511-PA [Anopheles gambiae str. PEST]
gi|157019185|gb|EAA05937.5| AGAP009511-PA [Anopheles gambiae str. PEST]
Length = 2929
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKV 277
Q TI++++LPGFIFESNRGTKH+FTAET+LGP+F GW K K++R K EA K ++
Sbjct: 868 QVTILQDELPGFIFESNRGTKHTFTAETTLGPDFAAGWINTKKKKMRCKAEAQKYQL 924
>gi|452000909|gb|EMD93369.1| hypothetical protein COCHEDRAFT_1192716 [Cochliobolus
heterostrophus C5]
Length = 1593
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 100/235 (42%), Gaps = 65/235 (27%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS------------------------- 63
+EVY +G+N N LG G + R PE + +L+R
Sbjct: 234 DEVYTFGSNKNVTLGFGDEDDRQFPERI-TLRRPDHLLQRFYREHLDRQNQHFAALGIPT 292
Query: 64 -----------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGS 98
I+ V M K H+ ++ D ++ CGHG GGRLG G+
Sbjct: 293 QDSSPQPRSTVDLPIHIRNTPILIQDVRMSKLHTAVLTADPVSNLYMCGHGPGGRLGTGN 352
Query: 99 ESSVVSPKKLNFE-KDKDKLG---VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPP 154
E++ + F + LG VA ++ Q+H++ + G VF G N++ QLG + P
Sbjct: 353 ETT-----RYQFTCIETGGLGHKHVAAIALGQNHTLAITEEGEVFSWGNNAYGQLGYALP 407
Query: 155 PSHIVSPTPIPRSSLKSSQPL-----IGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ PI + PL G+ R HSVV++S +YTFG + GQLG
Sbjct: 408 KPAVKDDDPISTIPRQIFGPLKREIVTGIAASRIHSVVHTSTSLYTFGKNEGQLG 462
>gi|303311863|ref|XP_003065943.1| ankyrin repeat containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240105605|gb|EER23798.1| ankyrin repeat containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 1619
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 65/233 (27%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL-----DSL------KRASIKQ----------- 66
+E++ +G+N N +LG G R PE + D L +R ++++
Sbjct: 248 DEIFTFGSNKNLSLGIGDGDDRQFPERIHLTRPDHLLYRFYHEREALREEQGMKATDGRI 307
Query: 67 ---------------------VCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVV 103
V M K H+ +++D ++ CG G GGRLG G E++
Sbjct: 308 DAGFADELPMKIRSLPMVFQDVVMSKLHTAILTNDPESNLYMCGFGPGGRLGTGDEAT-- 365
Query: 104 SPKKLNFE-------KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPS 156
+ NF K + VA+ QDHS+ + G VF G N + QLG S P +
Sbjct: 366 ---RFNFVCIEGGGIAGKKIINVALG---QDHSIAISDLGEVFTWGSNKYGQLGYSLPRT 419
Query: 157 HIVSPTPI---PRSSLK--SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ +PI PR + +IG HSVVY+S +YTFG + GQLG
Sbjct: 420 NQKDDSPIQTTPRQIFNPFKKETIIGAAASAIHSVVYTSTSIYTFGKNEGQLG 472
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 23/248 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG + LG G+++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+S G + G+LGLG E K+ + K LG+ A I+ HS L LSG++F
Sbjct: 157 EVFSWGQNKYGQLGLGYEYK----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDDNDRYV---PTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEFG 255
GQLGH+ S++ I P+ + E + + + G +H+ F + FG
Sbjct: 269 GGYGQLGHN----STSHEINPRK----VFELMGSLVTQITCGRQHTTAFVPSSGRIYSFG 320
Query: 256 GGWTGKKG 263
G G+ G
Sbjct: 321 LGGNGQLG 328
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D I+ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E + P+ + D + S + H++ L G V+ GL + QLGL
Sbjct: 64 GQ--LGHEKARKRPEHVG---ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLG 204
I P I SL Q ++ V CG +HS+ S EV+++G + GQLG
Sbjct: 119 PGTEECIRVPRNI--KSLSEIQ-IVQVACGYYHSLALSKGSEVFSWGQNKYGQLG 170
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 23/248 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG + LG G+++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+S G + G+LGLG E K+ + K LG+ A I+ HS L LSG++F
Sbjct: 157 EVFSWGQNKYGQLGLGYEYK----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDDNDRYV---PTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEFG 255
GQLGH+ S++ I P+ + E + + + G +H+ F + FG
Sbjct: 269 GGYGQLGHN----STSHEINPRK----VFELMGSLVTQITCGRQHTTAFVPSSGRIYSFG 320
Query: 256 GGWTGKKG 263
G G+ G
Sbjct: 321 LGGNGQLG 328
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D I+ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E + P+ + D + S + H++ L G V+ GL + QLGL
Sbjct: 64 GQ--LGHEKARKRPEHVG---ALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLG 204
I P I SL Q ++ V CG +HS+ S EV+++G + GQLG
Sbjct: 119 PGTEECIRVPRNI--KSLSEIQ-IVQVACGYYHSLALSKGSEVFSWGQNKYGQLG 170
>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
Length = 897
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 112/222 (50%), Gaps = 27/222 (12%)
Query: 5 DNEEMRPIDHLIRDRKIDVSSNQFNE---------VYIWGTNANYNLGTGSQQTRD---V 52
+N+ ID R +VSSN N +Y WG N++ LG Q +
Sbjct: 71 NNKRFARIDAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRT 130
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P + SL + ++ QV + HS+ V +DG V+S G + G+LG+ S S V PK++
Sbjct: 131 PRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQIL--- 187
Query: 113 DKDKL-GVAMASISQ--DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSL 169
KL G + I+ HS+ + SG++ G NSF QLGL ++SPT + SSL
Sbjct: 188 ---KLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTNDG-VLSPTCV--SSL 241
Query: 170 KSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHSPVT 209
+ SQ + CG H+ V + V+TFG +GQLGH+ ++
Sbjct: 242 R-SQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLS 282
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 7/156 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG+N LG S + P+ + L I Q+ HS+ +++ G + + G
Sbjct: 161 VFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNS 220
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG+ V+SP ++ + + +A A+ +DH+ L G VF G S QLG
Sbjct: 221 FGQLGLGTNDGVLSPTCVSSLRSQH---IAYAACGEDHTAVLTKEGGVFTFGAGSSGQLG 277
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV 186
+ H + + +Q + CGRF+++
Sbjct: 278 HNSLSHHCSPQMVVDLMGIVVTQ----ITCGRFYAL 309
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 25/227 (11%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPEL--LDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG- 87
++ WG LG G + + +D +IK + H++ + DG+++SCG
Sbjct: 1 MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGS 60
Query: 88 --HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
+GQ GR + + FE + ++S +H++ + ++ G NS
Sbjct: 61 NDYGQTGRQRNNKRFARIDA----FESMRI---TNVSSNGANHNLAINDKNCIYAWGDNS 113
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQL 203
QLG++ TP SL S ++ V CG+ HS+ V + V+++G + GQL
Sbjct: 114 DGQLGVTDQNLKQFYRTPRQIKSL-SKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQL 172
Query: 204 GHSPVTVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSFTAETS 249
G S+ S +EPK I++ L GF I + G HS S
Sbjct: 173 GID----SNVSSVEPK---QILK--LSGFYIVQIAAGGAHSLAITNS 210
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG E SP+ + K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGIECQKQTSPQLI-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 119 QGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IECQKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|357604837|gb|EHJ64353.1| hypothetical protein KGM_07866 [Danaus plexippus]
Length = 1329
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 18/146 (12%)
Query: 65 KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASI 124
K+VC+ KFHSVF+S G VW C GQ R G G S+ + P L + + + + S
Sbjct: 304 KKVCLGKFHSVFLSG-GEVW-CA-GQPARAG-GPHSTALRPIPLRLAETCVGMALTLTS- 358
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS----LKSSQPLIGVCC 180
+VFL+ SG+V LN+ +P PS + SP+ I ++ LK S PL GVC
Sbjct: 359 ----TVFLLQSGAVIQYSLNNTE----NPSPSTVKSPSVIKLANVKPVLKISHPL-GVCA 409
Query: 181 GRFHSVVYSSREVYTFGIHAGQLGHS 206
GR H+V ++ VYT+G++ GQLGH+
Sbjct: 410 GRSHAVAWNEHAVYTWGLNLGQLGHT 435
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG++ K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGTDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG++ K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGTDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|299744557|ref|XP_001831111.2| hypothetical protein CC1G_04002 [Coprinopsis cinerea okayama7#130]
gi|298406182|gb|EAU90733.2| hypothetical protein CC1G_04002 [Coprinopsis cinerea okayama7#130]
Length = 1537
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 38/210 (18%)
Query: 25 SNQFN-EVYIWGTNANYNLGTGSQQTRDVPE-----------------LLDSLKRASIKQ 66
S Q N E++ WG N N LG G R P+ L + SI+Q
Sbjct: 248 SRQLNAELFTWGANRNAALGLGDGNDRSHPDQVIIPGKGNPEDLKDNKLTERFIPISIRQ 307
Query: 67 VCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASI 124
+ M K H+ V+ + G + CG G GGRLG G + F + ++
Sbjct: 308 IQMSKLHTAIVTSEESGNLRVCGFGSGGRLGPGQHTQFSLKPLPQFS-----YTITQVAL 362
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLG---------LSPPPSHIVSPTPIPRSSLKSSQPL 175
QDH++ L +G V GLN F QLG L P + PTP + +
Sbjct: 363 GQDHTLALTKNGEVLSWGLNHFSQLGYPLELTGGKLEEP----IQPTPRKIPGPLKKETV 418
Query: 176 IGVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
IG+ + S ++ EV+T+G +AGQLG+
Sbjct: 419 IGIAASKKASACWTLDEVFTWGTNAGQLGY 448
>gi|322698668|gb|EFY90436.1| BTB domain and ankyrin repeat containing protein [Metarhizium
acridum CQMa 102]
Length = 1590
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 50/222 (22%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPE----------LLDSLK------------------ 60
+E Y++G+N N +LG G + R PE LLD K
Sbjct: 236 DEFYMFGSNKNLSLGVGDEDDRQYPERIVLERPDELLLDLYKEYLDSQDVESLPSQPDLN 295
Query: 61 ---------RASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVS--PKK 107
R +I+ + M KFH+ ++DD ++ CG G+ GRLGLG E++ P +
Sbjct: 296 DIPTLVRNQRLAIRDIIMSKFHTAVLTDDPVSNLYICGVGRRGRLGLGDENTQFRFVPVQ 355
Query: 108 LNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS 167
F K + ++ QDHS+ + +G ++ GLNS QLG + PP P+ S
Sbjct: 356 GPFIDRK----IRQVALGQDHSMAVTETGELWTWGLNSDSQLGYALPPVMRSDEEPMSLS 411
Query: 168 SLKSSQPLI-----GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ PL G+ HSV ++ +Y +G + GQL
Sbjct: 412 PRQVFGPLKKEIVQGIAASAIHSVAHTGSSLYCWGRNLGQLA 453
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ + K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG E K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIECQ----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 119 QGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IECQKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG++ K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGTDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG++ K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGTDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q +I V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|327348668|gb|EGE77525.1| BTB domain and ankyrin repeat protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 1703
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 98/227 (43%), Gaps = 52/227 (22%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPE-------------------LLDSLKRAS------ 63
+EV+ +G+N N NLG G + R PE ++ + +R S
Sbjct: 257 DEVFTFGSNKNLNLGLGDEDDRQFPERIGLTRPDHLLYRFNREHAVIRAARRGSDHDVEE 316
Query: 64 -------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSV 102
+Q+ M K H+ +++D ++ CG G GGRLG G E +
Sbjct: 317 PNIDSTAEIPTLVRSRPIIYQQIVMSKLHTGIITNDPESNLFMCGFGSGGRLGTGDEGTR 376
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
S + K V++A + QDHS+ + G VF G N + QLG + P ++
Sbjct: 377 FSFVCIEGGGLAGKKVVSLA-LGQDHSIAITEQGEVFSWGSNKYGQLGYALPKTNHKDDV 435
Query: 163 PI---PRSSLK--SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
PI PR + +IG HSVV++ +YTFG + GQLG
Sbjct: 436 PIQTTPRQIFNPFKKEAIIGAAASSIHSVVFTPTGLYTFGKNEGQLG 482
>gi|152012580|gb|AAI50223.1| Hectd1 protein [Danio rerio]
Length = 832
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 41/44 (93%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGK 264
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G+
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGR 820
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG E K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIECQ----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 119 QGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IECQKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|239611322|gb|EEQ88309.1| BTB domain and ankyrin repeat protein [Ajellomyces dermatitidis
ER-3]
Length = 1705
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 98/227 (43%), Gaps = 52/227 (22%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPE-------------------LLDSLKRAS------ 63
+EV+ +G+N N NLG G + R PE ++ + +R S
Sbjct: 258 DEVFTFGSNKNLNLGLGDEDDRQFPERIGLTRPDHLLYRFNREHAVIRAARRGSDHDVEE 317
Query: 64 -------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSV 102
+Q+ M K H+ +++D ++ CG G GGRLG G E +
Sbjct: 318 PNIDSTAEIPTLVRSRPIIYQQIVMSKLHTGIITNDPESNLFMCGFGSGGRLGTGDEGTR 377
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
S + K V++A + QDHS+ + G VF G N + QLG + P ++
Sbjct: 378 FSFVCIEGGGLAGKKVVSLA-LGQDHSIAITEQGEVFSWGSNKYGQLGYALPKTNHKDDV 436
Query: 163 PI---PRSSLK--SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
PI PR + +IG HSVV++ +YTFG + GQLG
Sbjct: 437 PIQTTPRQIFNPFKKEAIIGAAASSIHSVVFTPTGLYTFGKNEGQLG 483
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG++ K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGTDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|320039892|gb|EFW21826.1| hypothetical protein CPSG_01983 [Coccidioides posadasii str.
Silveira]
Length = 1140
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 65/233 (27%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL-----DSL------KRASIKQ----------- 66
+E++ +G+N N +LG G R PE + D L +R ++++
Sbjct: 248 DEIFTFGSNKNLSLGIGDGDDRQFPERIHLTRPDHLLYRFYHEREALREEQGMKATDGRI 307
Query: 67 ---------------------VCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVV 103
V M K H+ +++D ++ CG G GGRLG G E++
Sbjct: 308 DAGFADELPMKIRSLPMVFQDVVMSKLHTAILTNDPESNLYMCGFGPGGRLGTGDEAT-- 365
Query: 104 SPKKLNFE-------KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPS 156
+ NF K + VA+ QDHS+ + G VF G N + QLG S P +
Sbjct: 366 ---RFNFVCIEGGGIAGKKIINVALG---QDHSIAISDLGEVFTWGSNKYGQLGYSLPRT 419
Query: 157 HIVSPTPI---PRSSLK--SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ +PI PR + +IG HSVVY+S +YTFG + GQLG
Sbjct: 420 NQKDDSPIQTTPRQIFNPFKKETIIGAAASAIHSVVYTSTSIYTFGKNEGQLG 472
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDS--LKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+Y+ G LGTG + TR ++ + I V + + HS+ +SD G V++ G
Sbjct: 347 LYMCGFGPGGRLGTGDEATRFNFVCIEGGGIAGKKIINVALGQDHSIAISDLGEVFTWGS 406
Query: 89 GQGGRLGLG-------SESSV-VSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
+ G+LG +S + +P+++ N K + +G A ++I HSV + S S++
Sbjct: 407 NKYGQLGYSLPRTNQKDDSPIQTTPRQIFNPFKKETIIGAAASAI---HSV-VYTSTSIY 462
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPR---SSLKSSQPLIGVCCGRFHSVVYSSREVYTF 196
G N QLGL + + +PR +SL + + R +V+ + EV+ F
Sbjct: 463 TFGKNE-GQLGLIDADARSLEMQVVPRKVGASLFNQSISMVSAIDRATAVLLENHEVWVF 521
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 106/202 (52%), Gaps = 8/202 (3%)
Query: 31 VYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG + LG G ++T +P+ + +L I QV +HSV +S+DG+V+S G
Sbjct: 96 VFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTN 155
Query: 90 QGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG E S SP+++ + + + +A + HS L LSG+ F G N+ Q
Sbjct: 156 SHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHS 206
L LS + + P+ +LK + ++ + CG H+ V + +V+TFG ++ GQLGH
Sbjct: 213 LALSGNNAPVQRYKPVSIGALK-TLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271
Query: 207 PVTVSSASVIEPKVQATIIRED 228
P + +++ + + D
Sbjct: 272 PTAEKRGPQLVERIEGLVSQID 293
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 8/188 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
V+ ++ +V+ WGTN++ LG G + ++ P+ + SL+ + QV HS +S G
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSG 200
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
+ G G+L L ++ V K LGV S H+ L G VF
Sbjct: 201 TSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV--VYSSREVYTFGIH 199
G NS+ QLG P + P + R SQ + CG H++ +Y++ +V +FG
Sbjct: 261 GDNSYGQLG-HDPTAEKRGPQLVERIEGLVSQ----IDCGSDHTLAYIYTTGQVVSFGRG 315
Query: 200 AGQLGHSP 207
G SP
Sbjct: 316 PGCASRSP 323
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 16/197 (8%)
Query: 63 SIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMA 122
++ Q + HS+ + DG V SCG G+LG P+++ + L VA+
Sbjct: 24 TLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI---PALETLHVALV 80
Query: 123 SISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGR 182
S ++HS+ + G VF G S QLG+ P I + +I V CG
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKI---KTLAGIKIIQVACGH 137
Query: 183 FHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGT 240
+HSV S +V+++G ++ GQLG S AS P+ ++ E +P + + G
Sbjct: 138 YHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP--LAQVAAGG 190
Query: 241 KHSFTAETSLGPEFGGG 257
HSF S G FG G
Sbjct: 191 HHSFALSLS-GTSFGWG 206
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 77/176 (43%), Gaps = 11/176 (6%)
Query: 35 GTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRL 94
G N+ LG + PE + +L+ + V K HS+ V GRV++ G G+L
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107
Query: 95 GLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
G+G + + PKK+ K + + + HSV L G VF G NS QLGL
Sbjct: 108 GIGEFKETTFIPKKI---KTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGK 164
Query: 154 PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI---HAGQLGHS 206
SP + SL+ PL V G HS S +FG +AGQL S
Sbjct: 165 EFPSQASPQRV--RSLEGI-PLAQVAAGGHHSFALSLSGT-SFGWGSNNAGQLALS 216
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ + K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q +I V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|261205458|ref|XP_002627466.1| BTB domain and ankyrin repeat protein [Ajellomyces dermatitidis
SLH14081]
gi|239592525|gb|EEQ75106.1| BTB domain and ankyrin repeat protein [Ajellomyces dermatitidis
SLH14081]
Length = 1699
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 98/227 (43%), Gaps = 52/227 (22%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPE-------------------LLDSLKRAS------ 63
+EV+ +G+N N NLG G + R PE ++ + +R S
Sbjct: 257 DEVFTFGSNKNLNLGLGDEDDRQFPERIGLTRPDHLLYRFNREHAVIRAARRGSDHDVEE 316
Query: 64 -------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSV 102
+Q+ M K H+ +++D ++ CG G GGRLG G E +
Sbjct: 317 PNIDSTAEIPTLVRSRPIIYQQIVMSKLHTGIITNDPESNLFMCGFGSGGRLGTGDEGTR 376
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
S + K V++A + QDHS+ + G VF G N + QLG + P ++
Sbjct: 377 FSFVCIEGGGLAGKKVVSLA-LGQDHSIAITEQGEVFSWGSNKYGQLGYALPKTNHKDDV 435
Query: 163 PI---PRSSLK--SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
PI PR + +IG HSVV++ +YTFG + GQLG
Sbjct: 436 PIQTTPRQIFNPFKKEAIIGAAASSIHSVVFTPTGLYTFGKNEGQLG 482
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ + K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLI-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q +I V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG++ K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGTDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q +I V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG++ K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGTDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q +I V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG++ K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGTDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q +I V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IIQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S +G
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEG 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
+ G + G+LGLG + SP+ + K LG+ ++ HS L LSG++
Sbjct: 157 EFFCWGQNKYGQLGLGIDCKKQASPQLI-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 99/230 (43%), Gaps = 24/230 (10%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S E + +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLG--- 172
Query: 210 VSSASVIEPKVQAT--IIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
I+ K QA+ +I+ L + G HSF S G FG G
Sbjct: 173 ------IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 15/194 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ +G N + LG ++ +P+ ++S+ + IKQ+ +HS+ +S+DG V+ G+
Sbjct: 110 KLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNN 169
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG E PKKL F+K+ V S H+ + G ++ G N +L
Sbjct: 170 NEGQLGLGEEVENSLPKKLKFKKE-----VVSVSCGYYHTALVTRDGFLYTFGENELGKL 224
Query: 150 GLSPPPSHIVSPTPIPRSSL--KSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
GLS S +S T +P+S + I V CG H+V + + Y +G + GQLGH
Sbjct: 225 GLS---SSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGH 281
Query: 206 SPVTVSSASVIEPK 219
+ V EPK
Sbjct: 282 GTKLL---EVNEPK 292
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 100/188 (53%), Gaps = 13/188 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y++G+N LG G ++ + P + LK +++V + H++ S+ G+++S G +
Sbjct: 59 LYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSESGKLFSFGCNE 118
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG + + + PK++ + ++ + + HS+ L G V+V G N+ QLG
Sbjct: 119 DGQLGHVDKENELLPKEI---ESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLG 175
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE--VYTFGIHA-GQLGHSP 207
L + +P+ LK + ++ V CG +H+ + +R+ +YTFG + G+LG S
Sbjct: 176 LGEEVEN-----SLPK-KLKFKKEVVSVSCGYYHTALV-TRDGFLYTFGENELGKLGLSS 228
Query: 208 VTVSSASV 215
+S+ +V
Sbjct: 229 SQLSNTTV 236
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 20/148 (13%)
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVA 120
++ C D+ HS V++ GR++ G G+LGLG S+ P K L EK V
Sbjct: 41 VEMACGDE-HSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEK------VR 93
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSP--TPIPRSSLKSSQPLIGV 178
+ ++H++ SG +F G N QLG + ++ IP+ +K +
Sbjct: 94 KVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQ------I 147
Query: 179 CCGRFHSVVYSSR-EVYTFG-IHAGQLG 204
CG +HS++ S +VY +G + GQLG
Sbjct: 148 ACGTYHSIILSEDGDVYVWGNNNEGQLG 175
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 118 GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG 177
GV + +HS + SG ++V G N + QLGL S + P+ + LK + +
Sbjct: 39 GVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKS-LNKPSFVK--PLK-PEKVRK 94
Query: 178 VCCGRFHSVVYS-SREVYTFGIHA-GQLGH 205
V CGR H++VYS S ++++FG + GQLGH
Sbjct: 95 VACGRNHTIVYSESGKLFSFGCNEDGQLGH 124
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG++ K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGTDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|119193694|ref|XP_001247453.1| hypothetical protein CIMG_01224 [Coccidioides immitis RS]
gi|392863306|gb|EAS35959.2| BTB domain and ankyrin repeat protein [Coccidioides immitis RS]
Length = 1619
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 111/260 (42%), Gaps = 67/260 (25%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL-----DSL------KRASIKQ----------- 66
+E++ +G+N N +LG G R PE + D L +R ++++
Sbjct: 248 DEIFTFGSNKNLSLGIGDGDDRQFPERIHLTRPDHLLYRFYHEREALREEQGMKATDGRI 307
Query: 67 ---------------------VCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVV 103
V M K H+ +++D ++ CG G GGRLG G E++
Sbjct: 308 DAGFADELPMKIRSLPMVFQDVVMSKLHTAILTNDPESNLYMCGFGPGGRLGTGDEAT-- 365
Query: 104 SPKKLNFE-------KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPS 156
+ NF K + VA+ QDHS+ + G VF G N + QLG S P +
Sbjct: 366 ---RFNFVCIEGGGIAGKKIINVALG---QDHSIAISDLGEVFTWGSNKYGQLGYSLPRT 419
Query: 157 HIVSPTPI---PRSSLK--SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVS 211
+ +P+ PR + +IG HSVVY+S +YTFG + GQLG
Sbjct: 420 NQKDDSPVQTTPRQIFNPFKKETIIGAAASAIHSVVYTSTSIYTFGKNEGQLGLIDADAR 479
Query: 212 S--ASVIEPKVQATIIREDL 229
S VI KV A++ + +
Sbjct: 480 SLEMQVIPRKVGASLFNQSI 499
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDS--LKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+Y+ G LGTG + TR ++ + I V + + HS+ +SD G V++ G
Sbjct: 347 LYMCGFGPGGRLGTGDEATRFNFVCIEGGGIAGKKIINVALGQDHSIAISDLGEVFTWGS 406
Query: 89 GQGGRLGLG-------SESSV-VSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
+ G+LG +S V +P+++ N K + +G A ++I HSV + S S++
Sbjct: 407 NKYGQLGYSLPRTNQKDDSPVQTTPRQIFNPFKKETIIGAAASAI---HSV-VYTSTSIY 462
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPR---SSLKSSQPLIGVCCGRFHSVVYSSREVYTF 196
G N QLGL + + IPR +SL + + R +V+ + EV+ F
Sbjct: 463 TFGKNE-GQLGLIDADARSLEMQVIPRKVGASLFNQSIFMVSAIDRATAVLLENHEVWVF 521
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K +G+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLVGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|403173851|ref|XP_003332883.2| hypothetical protein PGTG_14042 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170724|gb|EFP88464.2| hypothetical protein PGTG_14042 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1796
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 41/228 (17%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRA-------------------SIKQVCMD 70
+++ WG+N N+ LG R PE + LKR+ + V +
Sbjct: 162 DLFTWGSNRNFVLGIHDDGDRHHPERIH-LKRSISSSSQLDPISSSNHFISNPLNFVAIG 220
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLGLGSESS-----------VVSPKKLNFEKDK----D 115
+ H+ ++ +G + CG G GGRLGL + S + + + F K
Sbjct: 221 RLHTALITSEGELRVCGFGSGGRLGLSTSSKSNAQDQRPTAGISAETQFTFAPVKRGGLA 280
Query: 116 KLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPS-----HIVSPTPIPRSSLK 170
+ V ++ QDH+V + G V+ G+N F QLG P + +++ P L
Sbjct: 281 QQKVKFVALGQDHTVVITNPGQVYTFGMNRFGQLGYGPESAGASIENMIQVEPKRVLGLL 340
Query: 171 SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG-HSPVTVSSASVIE 217
+IG R+H+ V+SS ++T+G + GQLG H+P +++S + I+
Sbjct: 341 KKVDVIGAAASRWHTAVFSSDSLFTWGANRGQLGYHNPHSLNSLASIQ 388
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSVF 139
V+ G + G+LGLG E K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIECQ----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 119 QGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IECQKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|403418896|emb|CCM05596.1| predicted protein [Fibroporia radiculosa]
Length = 1274
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 101/217 (46%), Gaps = 38/217 (17%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELL-----DSLKRAS----------- 63
+ID + +++ WG N N LG G+ R PE + D L +
Sbjct: 148 QIDTDDTRLADLFTWGANRNAALGLGNGDDRLHPEQVVIRAADGLSVSEKESVEARFSPI 207
Query: 64 -IKQVCMDKFHSVFVS--DDGRVWSCGHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLG 118
++QV M K H+V V+ D G + CG G GGRLG G ++ S+V +L + +
Sbjct: 208 HVQQVAMSKLHTVVVTAEDRGNLRLCGFGSGGRLGPGQHTQYSLVPLPQLT----QTIIA 263
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV-----SPTPIPRSSLKSSQ 173
VA+ QDH++ L SG VF GLN F QLG P S PI ++ K +
Sbjct: 264 VALG---QDHTLALSKSGEVFSWGLNRFSQLGYVIEPVTNASGLGRSEEPIQATARKVTG 320
Query: 174 PL-----IGVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
L GV + S ++ EV+T+G + GQLG+
Sbjct: 321 TLKNKVVAGVAACKIASACWTESEVFTWGTNNGQLGY 357
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+S G + G+LGLG + K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFSWGQNKYGQLGLGIDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 102/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+++G + GQLG +
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVSCGYYHSLALSKASEVFSWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IDCKKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K +G+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLVGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|194859720|ref|XP_001969437.1| GG23957 [Drosophila erecta]
gi|190661304|gb|EDV58496.1| GG23957 [Drosophila erecta]
Length = 2724
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
Q T++++DLPGFIFESNRGTKH+F+AET LGP+F GW+ K KR +SK E K +VR
Sbjct: 828 QVTVLQDDLPGFIFESNRGTKHTFSAETVLGPDFASGWSTAKKKRNKSKTEGQKFQVR 885
>gi|312381105|gb|EFR26925.1| hypothetical protein AND_06666 [Anopheles darlingi]
Length = 3355
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 47/58 (81%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
Q TI++++L GFIFESNRGTKH+FTAET+LGP+F GW K K++R K+EA K +V+
Sbjct: 1090 QVTILQDELAGFIFESNRGTKHAFTAETTLGPDFATGWINTKKKKMRCKVEAQKYQVK 1147
>gi|169606322|ref|XP_001796581.1| hypothetical protein SNOG_06199 [Phaeosphaeria nodorum SN15]
gi|160706964|gb|EAT86030.2| hypothetical protein SNOG_06199 [Phaeosphaeria nodorum SN15]
Length = 1564
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 104/252 (41%), Gaps = 69/252 (27%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPE---------LLDSLKRAS---------------- 63
+EVY +G+N N LG G Q R PE LL R
Sbjct: 234 DEVYTFGSNKNVTLGFGDQDDRQFPERIVLRRPDHLLQRFYREHRERQSQYGVSMGLPPQ 293
Query: 64 -----------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGS 98
I+ V M K H+ ++ D ++ CGHG GGRLG G+
Sbjct: 294 DSGFLQPKGIVELPIHIRNTPLVIQDVQMSKLHTAVLTTDPVSNLYMCGHGPGGRLGTGT 353
Query: 99 ESS-----VVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
E + + L+ K VA S+ Q+H++ + G ++ G N+F QLG +
Sbjct: 354 EMTRYQFTCIEGGGLSQRK------VAAVSLGQNHTLAVTDDGEIYSWGNNAFGQLGYAL 407
Query: 154 PPSHIVSPTPI---PRSSLK--SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPV 208
P + PI PR + + G+ R HSVV+++ +YTFG + GQLG +
Sbjct: 408 PKPALKDDDPISTIPRQIFGPLKREVVAGIAASRIHSVVHTTTSLYTFGKNEGQLG---I 464
Query: 209 TVSSASVIEPKV 220
S A +E +V
Sbjct: 465 VDSDARSLETQV 476
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K +G+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLVGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|195457709|ref|XP_002075680.1| GK23521 [Drosophila willistoni]
gi|194171765|gb|EDW86666.1| GK23521 [Drosophila willistoni]
Length = 2700
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 45/57 (78%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKV 277
Q TI+++DLPGFIFESNRGTKH+F+AET LGP+F GWT K KRL+SK + K V
Sbjct: 829 QVTILQDDLPGFIFESNRGTKHTFSAETVLGPDFSSGWTTCKKKRLKSKTDVQKLHV 885
>gi|24583318|ref|NP_609369.1| CG5604 [Drosophila melanogaster]
gi|7297647|gb|AAF52899.1| CG5604 [Drosophila melanogaster]
Length = 2727
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
Q T++++DLPGFIFESNRGTKH+F+AET LGP+F GW+ K KR +SK E K +VR
Sbjct: 829 QVTVLQDDLPGFIFESNRGTKHTFSAETVLGPDFASGWSTAKKKRNKSKTEGQKFQVR 886
>gi|195473575|ref|XP_002089068.1| GE26196 [Drosophila yakuba]
gi|194175169|gb|EDW88780.1| GE26196 [Drosophila yakuba]
Length = 2725
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
Q T++++DLPGFIFESNRGTKH+F+AET LGP+F GW+ K KR +SK E K +VR
Sbjct: 829 QVTVLQDDLPGFIFESNRGTKHTFSAETVLGPDFASGWSTAKKKRNKSKTEGQKFQVR 886
>gi|33636609|gb|AAQ23602.1| LP05936p [Drosophila melanogaster]
Length = 2727
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
Q T++++DLPGFIFESNRGTKH+F+AET LGP+F GW+ K KR +SK E K +VR
Sbjct: 829 QVTVLQDDLPGFIFESNRGTKHTFSAETVLGPDFASGWSTAKKKRNKSKTEGQKFQVR 886
>gi|330906804|ref|XP_003295606.1| hypothetical protein PTT_01852 [Pyrenophora teres f. teres 0-1]
gi|311332986|gb|EFQ96305.1| hypothetical protein PTT_01852 [Pyrenophora teres f. teres 0-1]
Length = 1648
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 106/253 (41%), Gaps = 71/253 (28%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS------------------------- 63
+EVY +G+N N LG G + R PE + +L+R
Sbjct: 234 DEVYTFGSNKNVTLGFGDEDDRQFPERI-TLRRPDHLLQRFYKEHRDQHNQYLAAMGMPI 292
Query: 64 ------------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLG 97
I+ V M K H+ ++ D ++ CGHG GGRLG G
Sbjct: 293 QDAGPQQARSTVDLPTHIRNTPIVIQDVRMSKLHTAILTTDPISNLYMCGHGPGGRLGTG 352
Query: 98 SESS-----VVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS 152
+E++ + L +K VA ++ Q+H++ + G +F G N++ QLG +
Sbjct: 353 NETTRYQFTCIESGGLGQKK------VAAVALGQNHTLAITEEGEIFSWGNNAYGQLGYT 406
Query: 153 PPPSHIVSPTPIPRSSLKSSQPL-----IGVCCGRFHSVVYSSREVYTFGIHAGQLGHSP 207
P + PI + PL G+ R HSVV+++ +YTFG + GQLG
Sbjct: 407 LPKPTMKDDDPISTIPRQIFGPLKRDIVTGIAASRIHSVVHTATSLYTFGKNEGQLG--- 463
Query: 208 VTVSSASVIEPKV 220
+ S A +E +V
Sbjct: 464 IVDSDARSLEMQV 476
>gi|195339727|ref|XP_002036468.1| GM11846 [Drosophila sechellia]
gi|194130348|gb|EDW52391.1| GM11846 [Drosophila sechellia]
Length = 2725
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
Q T++++DLPGFIFESNRGTKH+F+AET LGP+F GW+ K KR +SK E K +VR
Sbjct: 829 QVTVLQDDLPGFIFESNRGTKHTFSAETVLGPDFASGWSTAKKKRNKSKTEGQKFQVR 886
>gi|295673702|ref|XP_002797397.1| BTB domain and ankyrin repeat protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226282769|gb|EEH38335.1| BTB domain and ankyrin repeat protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1580
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 98/227 (43%), Gaps = 52/227 (22%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPE---------LLDSLKRA----------------- 62
+EV+ +G+N N NLG G + R PE LL + R
Sbjct: 248 DEVFTFGSNKNLNLGLGDEGDRQFPERIALTRPDHLLYTFHREYETIRAARTGSDPSAVH 307
Query: 63 ------------------SIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSV 102
S +Q+ M K H+ +++D ++ CG G GGRLG G E++
Sbjct: 308 PDINSVTEIPTLVRARPISFRQIVMSKLHTGILTNDPVSNLFICGFGPGGRLGTGDENTR 367
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
S + K VA+A + QDHS+ + G VF G N QLG + P ++ +
Sbjct: 368 FSFVCIEGGGLAGKKVVALA-LGQDHSIAISEQGEVFSWGSNKNGQLGYTLPQTNKKNDV 426
Query: 163 PI---PRSSLK--SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
PI PR + +IG HSVV++ +YTFG + GQLG
Sbjct: 427 PIQTIPRQIFNPFKKEAIIGAAASSIHSVVFTPTSLYTFGKNEGQLG 473
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 120/248 (48%), Gaps = 23/248 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG + K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQ----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEFG 255
GQLGH+ S++ I P+ + E + + ++ G +H+ F + FG
Sbjct: 269 GGYGQLGHN----STSHEINPRK----VFELMGSIVTQAACGRQHTSAFVPSSGRIYSFG 320
Query: 256 GGWTGKKG 263
G G+ G
Sbjct: 321 LGGNGQLG 328
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + + + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 119 QGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IDCQKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
Length = 1378
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 8/180 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG + LG G + R P+ + +L I QV +HS+ +S+DG+V+S G
Sbjct: 118 VFAWGAGSEGQLGIGEFKERSFTPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKN 177
Query: 90 QGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG E S SP+++ + + + +A + HS L LSG+ F G NS Q
Sbjct: 178 SHGQLGLGKEVPSQTSPQRV---RSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQ 234
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLGHS 206
L LS + + P+ +LK + ++ + CG H+ V + VYTFG + +GQLGHS
Sbjct: 235 LALSGTKAPVQRYKPLSVGALK-TLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLGHS 293
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E++ WG N++ LG G + P++++ L + Q+ + HS+ +S G V+S G
Sbjct: 914 ELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWGK 973
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG S SP L + D V + H+ L G VF G + Q
Sbjct: 974 NDFGQLGLGHTESKDSPSLL---RALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR--EVYTFGI-HAGQLGH 205
LG S + P + L ++ + + CGR+H++ Y S +V+ FG GQLG+
Sbjct: 1031 LGHSSTRDEL---RPCLVTELLGNR-VTQIACGRWHTLAYVSELGKVFAFGSGKNGQLGN 1086
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V+ WG N++ LG G + ++ P+ + SL+ + QV HS +S G + G
Sbjct: 170 QVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGS 229
Query: 89 GQGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+L L G+++ V K L+ K LGV S +H+ L +G+V+ G NS
Sbjct: 230 NSAGQLALSGTKAPVQRYKPLSVGALK-TLGVVYISCGSEHTAVLTQNGAVYTFGANSSG 288
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSP 207
QLG S + P + R SQ + CG +H++ Y VYT G GH P
Sbjct: 289 QLGHS---AEQRGPQCVERIDGLVSQ----IDCGSYHTLAY----VYTTG-QVVSFGHGP 336
Query: 208 VTVSSAS 214
S+++
Sbjct: 337 SCTSNST 343
>gi|451854751|gb|EMD68043.1| hypothetical protein COCSADRAFT_167311 [Cochliobolus sativus
ND90Pr]
Length = 1636
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 100/232 (43%), Gaps = 59/232 (25%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS------------------------- 63
+EVY +G+N N LG G + R PE + +L+R
Sbjct: 234 DEVYTFGSNKNVTLGFGDEDDRQFPERI-TLRRPDHLLQRFYKEHLDQQNQHFAAMGIPT 292
Query: 64 -----------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGS 98
I+ V M K H+ ++ D ++ CGHG GGRLG G+
Sbjct: 293 QDSSSQPRSTVDLPIHIRNTPIVIQDVRMSKLHTAVLTADPISNLYMCGHGPGGRLGTGN 352
Query: 99 ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHI 158
E++ + K VA ++ Q+H++ + G VF G N++ QLG + P +
Sbjct: 353 ETTRYQFTCIETGGLAQK-HVAAIALGQNHTLAITEEGEVFSWGNNAYGQLGYALPKPAV 411
Query: 159 VSPTPI---PRS---SLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
PI PR LK + + G+ R HSVV+++ +YTFG + GQLG
Sbjct: 412 KDDDPISTIPRQIFGPLKR-EIITGIAASRIHSVVHTATSLYTFGKNEGQLG 462
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q ++ V CG HS+ S + EV+ +G + GQLG
Sbjct: 119 VGSEECIRVPRNI--KSLSDIQ-IVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|322711121|gb|EFZ02695.1| BTB domain and ankyrin repeat containing protein [Metarhizium
anisopliae ARSEF 23]
Length = 1592
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 50/222 (22%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPE-----------------LLDSL------------ 59
+E Y++G+N N +LG G + R PE LDS
Sbjct: 238 DEFYVFGSNKNLSLGVGDEDDRQYPERIVLERPDELLLKFHKEYLDSQDIESPPSQPDLN 297
Query: 60 --------KRASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVS--PKK 107
+R +I+ + M KFH+ ++DD ++ CG G+ GRLGLG E++ P +
Sbjct: 298 DIPTLVRNQRLAIRDIVMSKFHTAVLTDDPVSNLYICGVGRRGRLGLGDENTQFKFVPVQ 357
Query: 108 LNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS 167
F K + ++ QDHS+ + +G ++ GLNS QLG + PP P+ S
Sbjct: 358 GPFIDRK----IRQVALGQDHSMAVTETGELWTWGLNSDSQLGYALPPVMRSDEEPMSLS 413
Query: 168 SLKSSQPLI-----GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ PL G+ HSV ++ +Y +G + GQL
Sbjct: 414 PRQVFGPLKKEIVQGIAASAIHSVAHTGSSLYCWGRNLGQLA 455
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q ++ V CG HS+ S + EV+ +G + GQLG
Sbjct: 119 VGSEECIRVPRNI--KSLSDIQ-IVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|354475641|ref|XP_003500036.1| PREDICTED: inhibitor of Bruton tyrosine kinase, partial [Cricetulus
griseus]
Length = 1134
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 120 AMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVC 179
+ + ++DH+V L G VF GLN FHQLG+ PPPS P I LK + +IGV
Sbjct: 14 SQVAAAKDHTVVLTEDGCVFTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GKTVIGVA 72
Query: 180 CGRFHSVVYSSREVYTFGIHAGQLGH 205
GRFH+V+++ VYT G++ GQLGH
Sbjct: 73 AGRFHTVLWTREAVYTLGLNGGQLGH 98
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q ++ V CG HS+ S + EV+ +G + GQLG
Sbjct: 119 VGSEECIRVPRNI--KSLSDIQ-IVQVACGYCHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|393214230|gb|EJC99723.1| hypothetical protein FOMMEDRAFT_170318 [Fomitiporia mediterranea
MF3/22]
Length = 1498
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 24 SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD--------SLKRASIKQ--------- 66
SS + ++Y WGTN N LG R PEL+ ++ SIK+
Sbjct: 160 SSTEATDLYTWGTNRNAALGVVDGDDRTFPELVPIPPQREHAEPQKLSIKERFQPIRAER 219
Query: 67 VCMDKFHSVFVSDDGR--VWSCGHGQGGRLGLGSESSV---VSP-KKLNFEKDKDKLGVA 120
+ M K H+ V+ + R + CG G GGRLG GS + ++P K+L+ E +
Sbjct: 220 IDMAKLHTAVVTSEFRANLRICGFGSGGRLGFGSAQYIQYALAPLKELSSEAQ-----IV 274
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCC 180
++ QDH++ L +G V GL F QLG + S + P + +IG+
Sbjct: 275 DVALGQDHTLALTKTGGVLSWGLARFSQLGYALDASQTMQTAPRRIVGPLKKEHVIGIAA 334
Query: 181 GRFHSVVYSSREVYTFGIHAGQLGH----SPVTV 210
R S ++ E++T+G + GQLG+ +PV V
Sbjct: 335 CRTASACWTHNELFTWGTNGGQLGYDRTGTPVQV 368
>gi|344238937|gb|EGV95040.1| Inhibitor of Bruton tyrosine kinase [Cricetulus griseus]
Length = 1086
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 120 AMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVC 179
+ + ++DH+V L G VF GLN FHQLG+ PPPS P I LK + +IGV
Sbjct: 14 SQVAAAKDHTVVLTEDGCVFTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GKTVIGVA 72
Query: 180 CGRFHSVVYSSREVYTFGIHAGQLGH 205
GRFH+V+++ VYT G++ GQLGH
Sbjct: 73 AGRFHTVLWTREAVYTLGLNGGQLGH 98
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESS-VVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SP+ + K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQKQTSPQLI-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + + + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 119 QGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IDCQKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG + K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQ----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + + + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 119 QGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IDCQKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG + K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQ----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + + + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 119 QGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IDCQKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG + K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IDCKKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG + K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQ----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + + + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 119 QGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IDCQKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 112/237 (47%), Gaps = 18/237 (7%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S NE+Y WG LG G+ +P+ + +L+ IKQ+ H + V+ +G V
Sbjct: 82 SESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQ 141
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
S G Q G+LGLG+ + P+K+ K + + M + +HSV + +G ++ G
Sbjct: 142 SWGRNQNGQLGLGNTEDSLVPQKIQAFK---GVPIKMVAAGAEHSVAITENGELYGWGWG 198
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ LGL P SS+ + ++ V CG H++ V SS +YT+G GQ
Sbjct: 199 RYGNLGLGDRNDRW---NPEKVSSVDCDK-MVMVACGWRHTISVSSSGGIYTYGWSKYGQ 254
Query: 203 LGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
LGH S++ K+QA + I + + G +HS A TS G FG GW
Sbjct: 255 LGHGNF---EDSLVPQKLQALSDK-----LISQVSGGWRHSM-ALTSTGLLFGWGWN 302
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD 70
PI + + V+ + E+Y WG NLG G + R PE + S+ + V
Sbjct: 172 PIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACG 231
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
H++ VS G +++ G + G+LG G+ + P+KL DK ++ S HS+
Sbjct: 232 WRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKL---ISQVSGGWRHSM 288
Query: 131 FLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
L +G +F G N F Q+G+ H SP + Q ++ + CG H++ +
Sbjct: 289 ALTSTGLLFGWGWNKFGQVGVGDNLDH-CSPVQV---KFPQDQRVVQISCGWRHTIAVTE 344
Query: 191 RE-VYTFGIHA-GQLGH-SPVTVSSASVIE 217
+E V+++G GQLGH + +S +IE
Sbjct: 345 KENVFSWGRGTNGQLGHGDTIDRNSPKIIE 374
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 106 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 165
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG + K+ + + K LG+ ++ HS L LSG++F
Sbjct: 166 EVFCWGQNKYGQLGLGIDCQ----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 221
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 222 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 277
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 278 GGYGQLGHN----STSHEINPR 295
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 13 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 72
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + + + H++ L G V+ GL+S QLGL
Sbjct: 73 GQ--LGHEKSRKKPEQV---VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL 127
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 128 QGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 181
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 182 IDCQKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 224
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 220 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 279
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 280 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 337
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SP+ + K LG+ I+ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI-----KSLLGIPFMQIAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--- 172
Query: 210 VSSASVIEPKVQAT--IIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
I+ K QA+ +I+ L + G HSF S G FG G
Sbjct: 173 ------IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SP+ + K LG+ I+ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI-----KSLLGIPFMQIAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--- 172
Query: 210 VSSASVIEPKVQAT--IIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
I+ K QA+ +I+ L + G HSF S G FG G
Sbjct: 173 ------IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG + K+ + + K LG+ I+ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIDCK----KQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--- 172
Query: 210 VSSASVIEPKVQAT--IIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
I+ K QA+ +I+ L + G HSF S G FG G
Sbjct: 173 ------IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SP+ + K LG+ I+ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI-----KSLLGIPFMQIAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--- 172
Query: 210 VSSASVIEPKVQAT--IIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
I+ K QA+ +I+ L + G HSF S G FG G
Sbjct: 173 ------IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG + K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IDCKKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SP+ + K LG+ I+ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI-----KSLLGIPFMQIAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--- 172
Query: 210 VSSASVIEPKVQAT--IIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
I+ K QA+ +I+ L + G HSF S G FG G
Sbjct: 173 ------IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|189191106|ref|XP_001931892.1| BTB domain and ankyrin repeat containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187973498|gb|EDU40997.1| BTB domain and ankyrin repeat containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1663
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 66/236 (27%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS------------------------- 63
+EVY +G+N N LG G + R PE + +L+R
Sbjct: 234 DEVYTFGSNKNVTLGFGDEDDRQFPERI-TLRRPDHLLQRFYKEHRDQHNQYLAAIGMPI 292
Query: 64 ------------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLG 97
I+ V M K H+ ++ D ++ CGHG GGRLG G
Sbjct: 293 QDVGPQQARSTVDLPTHIRNTPIVIQDVRMSKLHTAILTTDPISNLYMCGHGPGGRLGTG 352
Query: 98 SESSVVSPKKLNFE-KDKDKLG---VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
+E++ + F + LG VA ++ Q+H++ + G +F G N++ QLG +
Sbjct: 353 NETT-----RYQFTCIESGGLGQKKVAGVALGQNHTLAITEEGEIFSWGNNAYGQLGYTL 407
Query: 154 PPSHIVSPTPIPRSSLKSSQPL-----IGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
P + PI + PL G+ R HSVV+++ +YTFG + GQLG
Sbjct: 408 PKPTMKDDDPISTIPRQIFGPLKRDIVTGIAASRIHSVVHTATSLYTFGKNEGQLG 463
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SP+ + K LG+ I+ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI-----KSLLGIPFMQIAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--- 172
Query: 210 VSSASVIEPKVQAT--IIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
I+ K QA+ +I+ L + G HSF S G FG G
Sbjct: 173 ------IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSVF 139
V+ G + G+LGLG + K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQ----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ ++ + VA + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQVVALDAQNIVAVACG---EAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 119 QGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IDCQKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
Length = 1031
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 19/233 (8%)
Query: 31 VYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG + LG G ++ +P+ + +L I QV +HS+ +S+DG+V+S G
Sbjct: 107 VFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSN 166
Query: 90 QGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG E S SP+++ + D + +A + HS L LSG+ F G N+ Q
Sbjct: 167 SHGQLGLGKELPSQASPQRV---RSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 223
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHS 206
L + S P S+LK + ++ + CG H+ V + +V+TFG ++ GQLGHS
Sbjct: 224 LAFFGSNVPVQSYKPRSVSALK-TLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHS 282
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGP--EFGGG 257
P +A P+ + E + G + + + G+ H+ + G FG G
Sbjct: 283 P----TAEKTGPQ-----LMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFGRG 326
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V+ WG+N++ LG G + ++ P+ + SL + QV HS +S G + G
Sbjct: 159 QVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGS 218
Query: 89 GQGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+L GS V S K + K LGV S +H+ L +G VF G NS
Sbjct: 219 NNAGQLAFFGSNVPVQSYKPRSVSALK-TLGVVYISCGHEHTAVLTQNGKVFTFGDNSCG 277
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV--VYSSREVYTFG 197
QLG S P + P + SQ + CG +H++ VY++ +V +FG
Sbjct: 278 QLGHS-PTAEKTGPQLMEGIEGLVSQ----IDCGSYHTLAYVYTTGQVVSFG 324
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
++Q + HS+ + DG V SCG G+LG PK + + + L V + S
Sbjct: 36 LRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPI---QALETLRVELVS 92
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
++HS+ + G VF G S QLG+ + P I + +I V CG +
Sbjct: 93 CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKI---KTLTGIKIIQVSCGNY 149
Query: 184 HSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTK 241
HS+ S +V+++G ++ GQLG S AS P+ ++ + +P + + G
Sbjct: 150 HSLALSEDGQVFSWGSNSHGQLGLGKELPSQAS---PQRVRSL--DGIP--LAQVAAGGA 202
Query: 242 HSFTAETSLGPEFGGG 257
HSF S G FG G
Sbjct: 203 HSFALSLS-GTSFGWG 217
>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
Length = 371
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V++WG + LG G+ ++ P+ L +K + HS+F+++DGR+++ G
Sbjct: 98 GDVFVWGRGFSGQLGLGTNKSHFTPQPLSF--PMPVKALSCGGSHSLFITEDGRLYATGR 155
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ G+LG GS+ SV+SP ++ + + V A +D SV SG VF G + + Q
Sbjct: 156 GKEGQLGTGSQESVLSPVEVQMPEGSGR--VKAAECGKDFSVIATESGQVFTFGSDDYGQ 213
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFH-SVVYSSREVYTFGI-HAGQLGHS 206
LGL + ++P + ++ + + + + G +H + V S ++YT+G +GQLG+
Sbjct: 214 LGLGQFARYAMTPKEV---AVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNG 270
Query: 207 PVTVSSASVIEPKVQ 221
S V+ ++Q
Sbjct: 271 NTVDVSLPVLVRELQ 285
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 57/129 (44%), Gaps = 18/129 (13%)
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G LGLG V+ P+K+N E GV S H+ ++ G VFV G QLGL
Sbjct: 60 GLLGLGETLDVLYPQKVNLE------GVTCVSAGHRHAAAIVGGGDVFVWGRGFSGQLGL 113
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLGHSPVT 209
SH TP P L P+ + CG HS+ + +Y G GQLG T
Sbjct: 114 GTNKSHF---TPQP---LSFPMPVKALSCGGSHSLFITEDGRLYATGRGKEGQLG----T 163
Query: 210 VSSASVIEP 218
S SV+ P
Sbjct: 164 GSQESVLSP 172
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWS 85
+Y WG LG G +T DV P+ + + V H+ + G V+
Sbjct: 53 LERMYCWGL-----LGLG--ETLDVLYPQ---KVNLEGVTCVSAGHRHAAAIVGGGDVFV 102
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G G G+LGLG+ S +P+ L+F + V S HS+F+ G ++ G
Sbjct: 103 WGRGFSGQLGLGTNKSHFTPQPLSF-----PMPVKALSCGGSHSLFITEDGRLYATGRGK 157
Query: 146 FHQLGLSPPPSHIVSPTPI--PRSS--LKSSQPLIGVCCGRFHSVVYS-SREVYTFG--- 197
QLG S ++SP + P S +K+++ CG+ SV+ + S +V+TFG
Sbjct: 158 EGQLGTGSQES-VLSPVEVQMPEGSGRVKAAE------CGKDFSVIATESGQVFTFGSDD 210
Query: 198 ---IHAGQLGHSPVTVSSASVIEPKVQATIIRED 228
+ GQ +T +V+ K +I D
Sbjct: 211 YGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGD 244
>gi|326471089|gb|EGD95098.1| hypothetical protein TESG_02592 [Trichophyton tonsurans CBS 112818]
Length = 1643
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 99/220 (45%), Gaps = 46/220 (20%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPEL---------------------LDS--------L 59
+E++ +G+N N +LG G R PE LDS L
Sbjct: 238 DELFTFGSNKNLSLGVGDSDDRQFPERITLPRPEVLIHRFYEEKYENSLDSETPEEIPFL 297
Query: 60 KRAS---IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
R++ ++ V M K H+ ++ D ++ CG G GGRLG G E + SP ++
Sbjct: 298 IRSTPLIVQDVVMSKLHTAILTTDPCSNLYMCGFGPGGRLGTGHEGTSFSPVCVDSGAIT 357
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV--SPTPIPRSSLKSS 172
K A+A + DH++ + G VF G N + QLG + P + SP IP + L
Sbjct: 358 GKRITAVA-LGLDHTIAISDQGEVFTWGSNKYGQLGYTLPKTKPTASSPNDIP-TQLSPR 415
Query: 173 Q--------PLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
Q ++G HSVV++S +YTFG + GQLG
Sbjct: 416 QIFNPFKRDRILGAAASSIHSVVFTSSALYTFGRNDGQLG 455
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS--LKRASIKQVCMDKFHSVFVSDD 80
++++ + +Y+ G LGTG + T P +DS + I V + H++ +SD
Sbjct: 318 LTTDPCSNLYMCGFGPGGRLGTGHEGTSFSPVCVDSGAITGKRITAVALGLDHTIAISDQ 377
Query: 81 GRVWSCGHGQGGRLGL------------GSESSVVSPKKL--NFEKDKDKLGVAMASISQ 126
G V++ G + G+LG + +SP+++ F++D+ LG A +SI
Sbjct: 378 GEVFTWGSNKYGQLGYTLPKTKPTASSPNDIPTQLSPRQIFNPFKRDR-ILGAAASSI-- 434
Query: 127 DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS--SQPLIGVCC-GRF 183
HSV + S +++ G N QLGL + ++ PIPR S S + VC R
Sbjct: 435 -HSV-VFTSSALYTFGRND-GQLGLMDADARSLTSQPIPRKVGASLFSVSISSVCAIERA 491
Query: 184 HSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQAT 223
V+ + EV+ F + P+T S +S I AT
Sbjct: 492 TVVLLENHEVWVFTHYGYSKLIFPLTGSVSSFIRSSFMAT 531
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 117/249 (46%), Gaps = 25/249 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG A+ LG G+++ VP + SL I QV +HS+ +S
Sbjct: 97 LTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+S G + G+LGLG + SP+ + K LG+ I+ HS L LSG+V
Sbjct: 157 EVFSWGQNKHGQLGLGYDLKKQTSPQLI-----KSLLGIPFGQIAAGGAHSFALTLSGAV 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ + CG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYISCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEF 254
GQLGH+ S+ I P+ + E + + + G +H+ F T F
Sbjct: 268 AGGYGQLGHN----STGHEINPRK----VFELMGNIVTQIACGRQHTSAFVPSTGRIYSF 319
Query: 255 GGGWTGKKG 263
G G G+ G
Sbjct: 320 GLGGNGQLG 328
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P + +++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ G + QLGL
Sbjct: 64 GQ--LGHEKSRKRPEQVG---ALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL 118
Query: 152 SPPPSHIVSPTPIPRS--SLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLG 204
+ T +PR+ SL Q ++ V CG +HS+ S EV+++G + GQLG
Sbjct: 119 PGTEEY----TRVPRNIKSLSDVQ-IVQVACGYYHSLALSKGSEVFSWGQNKHGQLG 170
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG + R VP LL SL+ I + + H+ ++ +G V++ G G
Sbjct: 211 VFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S ++P+K+ FE + +A Q S F+ +G ++ GL QLG
Sbjct: 271 YGQLGHNSTGHEINPRKV-FEL-MGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328
Query: 151 LSPPPSHIVSPTPI 164
+ S+ SP P+
Sbjct: 329 MG-STSNRKSPFPV 341
>gi|321456372|gb|EFX67482.1| hypothetical protein DAPPUDRAFT_63883 [Daphnia pulex]
Length = 2758
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 45/63 (71%), Gaps = 10/63 (15%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT-----GKKGKRLRSKLEAVKQ 275
QATI+REDLPGF+FESNRGTKH+FTAET+LGPE GW G G+R A KQ
Sbjct: 814 QATILREDLPGFLFESNRGTKHTFTAETALGPELAAGWAPVHCPGSGGRR-----SATKQ 868
Query: 276 KVR 278
KVR
Sbjct: 869 KVR 871
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 117/249 (46%), Gaps = 25/249 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG A+ LG G+++ VP + SL I QV +HS+ +S
Sbjct: 97 LTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+S G + G+LGLG + SP+ + K LG+ I+ HS L LSG+V
Sbjct: 157 EVFSWGQNKHGQLGLGYDLKKQTSPQLI-----KSLLGIPFGQIAAGGAHSFALTLSGAV 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ + CG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYISCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEF 254
GQLGH+ S+ I P+ + E + + + G +H+ F T F
Sbjct: 268 AGGYGQLGHN----STGHEINPRK----VFELMGNIVTQIACGRQHTSAFVPSTGRIYSF 319
Query: 255 GGGWTGKKG 263
G G G+ G
Sbjct: 320 GLGGNGQLG 328
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P + +++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ G + QLGL
Sbjct: 64 GQ--LGHEKSRKRPEQVG---ALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL 118
Query: 152 SPPPSHIVSPTPIPRS--SLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLG 204
+ T +PR+ SL Q ++ V CG +HS+ S EV+++G + GQLG
Sbjct: 119 PGTEEY----TRVPRNIKSLSDVQ-IVQVACGYYHSLALSKGSEVFSWGQNKHGQLG 170
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG + R VP LL SL+ I + + H+ ++ +G V++ G G
Sbjct: 211 VFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S ++P+K+ FE + +A Q S F+ +G ++ GL QLG
Sbjct: 271 YGQLGHNSTGHEINPRKV-FEL-MGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328
Query: 151 LSPPPSHIVSPTPI 164
+ S+ SP P+
Sbjct: 329 MG-STSNRKSPFPV 341
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SP+ + K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--- 172
Query: 210 VSSASVIEPKVQAT--IIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
I+ K QA+ +I+ L + G HSF S G FG G
Sbjct: 173 ------IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SP+ + K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--- 172
Query: 210 VSSASVIEPKVQAT--IIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
I+ K QA+ +I+ L + G HSF S G FG G
Sbjct: 173 ------IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|357613967|gb|EHJ68816.1| putative X-linked retinitis pigmentosa GTPase regulator [Danaus
plexippus]
Length = 733
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 89/181 (49%), Gaps = 18/181 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N +Y G N LG+G + VP+ +D ++KQV H+ +++DGRV+ CG
Sbjct: 126 NAIYSVGCNDEGQLGSGDLEHHSVPQYVDL--EVTVKQVSAGSNHTALLTEDGRVFVCGS 183
Query: 89 GQGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG + S +S +L F + +A H+VF+ G+VFV G N
Sbjct: 184 NSEGQLGLGEDRRSALSFTELKFME-----SIAFVECGYYHTVFITAKGAVFVTGDNENQ 238
Query: 148 QLGLSPPPSHIVSPTPIPRS-SLKSSQPLIGVCCGRFHSVVYSSRE--VYTFGIHA-GQL 203
+LG+ S + P +P +KS+ CCG H+ + S E + FG + GQL
Sbjct: 239 KLGIQNTSSILYVPQVLPLDVHIKSA------CCGANHTFLLSMDESKILAFGSNEKGQL 292
Query: 204 G 204
G
Sbjct: 293 G 293
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+++G NA LG G + P + LK V + H+VFV+D ++S G
Sbjct: 76 VFVFGANAWGQLGLGHKDEVTRPSCVKFLKPHRATFVACGRAHTVFVTDTNAIYSVGCND 135
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G P+ ++ E + V S +H+ L G VFVCG NS QLG
Sbjct: 136 EGQLGSGDLEHHSVPQYVDLE-----VTVKQVSAGSNHTALLTEDGRVFVCGSNSEGQLG 190
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHAGQ 202
L +S T LK + + V CG +H+V +++ V+ G + Q
Sbjct: 191 LGEDRRSALSFT-----ELKFMESIAFVECGYYHTVFITAKGAVFVTGDNENQ 238
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
+ S +HS + G VFV G N++ QLGL + P+ + LK + V
Sbjct: 57 IVAISCGDEHSAVICEKGRVFVFGANAWGQLGLG-HKDEVTRPSCV--KFLKPHRATF-V 112
Query: 179 CCGRFHSV-VYSSREVYTFGIH-AGQLG 204
CGR H+V V + +Y+ G + GQLG
Sbjct: 113 ACGRAHTVFVTDTNAIYSVGCNDEGQLG 140
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SP+ + K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--- 172
Query: 210 VSSASVIEPKVQAT--IIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
I+ K QA+ +I+ L + G HSF S G FG G
Sbjct: 173 ------IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG + K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG + K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SP+ + K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--- 172
Query: 210 VSSASVIEPKVQAT--IIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
I+ K QA+ +I+ L + G HSF S G FG G
Sbjct: 173 ------IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSVF 139
V+ G + G+LGLG + K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIDCK----KQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--- 172
Query: 210 VSSASVIEPKVQAT--IIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
I+ K QA+ +I+ L + G HSF S G FG G
Sbjct: 173 ------IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SP+ + K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGIDCKKQASPQLI-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 101/230 (43%), Gaps = 24/230 (10%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG--- 172
Query: 210 VSSASVIEPKVQAT--IIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
I+ K QA+ +I+ L + G HSF S G FG G
Sbjct: 173 ------IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+S G + G+LGLG + + SP+ + K G+ ++ HS L LSG++
Sbjct: 157 EVFSWGQNKYGQLGLGIDCNKQASPQLI-----KSLTGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q ++ V CG +HS+ S + EV+++G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFSWGQNKYGQLG 170
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|195578103|ref|XP_002078905.1| GD22285 [Drosophila simulans]
gi|194190914|gb|EDX04490.1| GD22285 [Drosophila simulans]
Length = 2404
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
Q T++++DLPGFIFESNRGTKH+F+AET LGP+F GW+ K KR +SK E K + R
Sbjct: 829 QVTVLQDDLPGFIFESNRGTKHTFSAETVLGPDFASGWSTAKKKRNKSKTEGQKFQAR 886
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG + K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIDCK----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SP+ + K +G+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGLDCKKQTSPQLI-----KSLVGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG
Sbjct: 119 LGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG 170
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|326479774|gb|EGE03784.1| BTB domain and ankyrin repeat protein [Trichophyton equinum CBS
127.97]
Length = 1643
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 46/220 (20%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL------------------DSLKRAS------- 63
+E++ +G+N N +LG G R PE + +SL +
Sbjct: 238 DELFTFGSNKNLSLGVGDSDDRQFPERITLPRPEVLIHRFYEEKYENSLNSETPEGIPFL 297
Query: 64 -------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
++ V M K H+ ++ D ++ CG G GGRLG G E + SP ++
Sbjct: 298 IRSTPLIVQDVVMSKLHTAILTTDPCSNLYMCGFGPGGRLGTGHEGTSFSPVCVDSGAIT 357
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV--SPTPIPRSSLKSS 172
K A+A + DH++ + G VF G N + QLG + P + SP IP + L
Sbjct: 358 GKRITAVA-LGLDHTIAISDQGEVFTWGSNKYGQLGYTLPKTKPTASSPNDIP-TQLSPR 415
Query: 173 Q--------PLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
Q ++G HSVV++S +YTFG + GQLG
Sbjct: 416 QIFNPFKRDRILGAAASSIHSVVFTSSALYTFGRNDGQLG 455
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS--LKRASIKQVCMDKFHSVFVSDD 80
++++ + +Y+ G LGTG + T P +DS + I V + H++ +SD
Sbjct: 318 LTTDPCSNLYMCGFGPGGRLGTGHEGTSFSPVCVDSGAITGKRITAVALGLDHTIAISDQ 377
Query: 81 GRVWSCGHGQGGRLGL------------GSESSVVSPKKL--NFEKDKDKLGVAMASISQ 126
G V++ G + G+LG + +SP+++ F++D+ LG A +SI
Sbjct: 378 GEVFTWGSNKYGQLGYTLPKTKPTASSPNDIPTQLSPRQIFNPFKRDR-ILGAAASSI-- 434
Query: 127 DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS--SQPLIGVCC-GRF 183
HSV + S +++ G N QLGL + ++ PIPR S S + VC R
Sbjct: 435 -HSV-VFTSSALYTFGRND-GQLGLMDADARSLTSQPIPRGVGASLFSVSISSVCAIERA 491
Query: 184 HSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQAT 223
V+ + EV+ F + P+T S +S I AT
Sbjct: 492 TVVLLENHEVWVFTHYGYSKLIFPLTGSVSSFIRSSFMAT 531
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 94/185 (50%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V+ WG ++ LG T + VP L+ L + +I Q+ +H + ++ DG+ ++ G
Sbjct: 104 QVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQ 163
Query: 89 GQGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ K D + +A + HS L LSG+VF G NS
Sbjct: 164 NSYGQLGLGKECPSQASPQRV---KSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L SQ ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDERDRESPCHV---------KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDVPE--LLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG ++ G GS +PE + + ++K+V HSVF+ +DG V++CG
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+LG SE S P+ + + + VA + HSV L G VF G S QLGL
Sbjct: 64 GQLGHESEGS--KPEPIGALAGQHIVHVACG---ESHSVALSDQGQVFSWGAGSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVT 209
+ + P I + + Q ++ + CG +H + ++ + +T+G ++ GQLG
Sbjct: 119 TTIEDAVTVPRLIKK---LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKEC 175
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
S AS P+ ++ + +P + + G HSF S G FG G
Sbjct: 176 PSQAS---PQRVKSL--DGIP--LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 71/137 (51%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N++ LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSV-FLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G ++ I+ + H++ F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|195146828|ref|XP_002014386.1| GL19165 [Drosophila persimilis]
gi|194106339|gb|EDW28382.1| GL19165 [Drosophila persimilis]
Length = 2719
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 46/58 (79%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
Q TI+++DL GFIFESNRGTKH+FTAET LGP+F GW+ K KR++SK + + ++R
Sbjct: 828 QVTILQDDLLGFIFESNRGTKHTFTAETVLGPDFASGWSTAKKKRIKSKTDGQRFQIR 885
>gi|391337262|ref|XP_003742989.1| PREDICTED: protein RCC2 homolog [Metaseiulus occidentalis]
Length = 486
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 105/200 (52%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+ +++G N N LGT + R++P ++D+LK +++ M K H++F++ +G V+ CG
Sbjct: 133 KAWVFGRNTNGQLGTCDTKARNIPVIVDTLKESTVINAAMGKNHTLFLTINGTVFGCGEN 192
Query: 90 QGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G++G+G ++ +++ P ++N + K V + S+ + +G +F CG + Q
Sbjct: 193 KCGQVGVGHTQPNILVPTRINMKGRK----VVKLDCGNEFSMMVDSNGQLFGCGSPEYGQ 248
Query: 149 LGLSPPP-----------SHIVSPTPIP---------RSSLKSSQPLIGVCCGRFHS-VV 187
LG + +++ SP +P R++ ++ + CG H+ V+
Sbjct: 249 LGNNTDGQYFITSSKLAFNYVTSPKRVPLFVEKDKDNRATPIHDVSVVDLSCGINHTAVI 308
Query: 188 YSSREVYTFGIHA-GQLGHS 206
S+R V+T+G G+LGH+
Sbjct: 309 DSNRRVFTWGFGGYGRLGHA 328
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 71/135 (52%), Gaps = 7/135 (5%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H+V ++++G+ W G G+LG + P ++ K+ + AM ++H++FL
Sbjct: 124 HTVLITNEGKAWVFGRNTNGQLGTCDTKARNIPVIVDTLKESTVINAAMG---KNHTLFL 180
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE 192
++G+VF CG N Q+G+ +I+ PT R ++K + + C F +V S+ +
Sbjct: 181 TINGTVFGCGENKCGQVGVGHTQPNILVPT---RINMKGRKVVKLDCGNEFSMMVDSNGQ 237
Query: 193 VYTFGI-HAGQLGHS 206
++ G GQLG++
Sbjct: 238 LFGCGSPEYGQLGNN 252
>gi|258574911|ref|XP_002541637.1| predicted protein [Uncinocarpus reesii 1704]
gi|237901903|gb|EEP76304.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1577
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 106/257 (41%), Gaps = 66/257 (25%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLK-----------RASIKQ----------- 66
+EV+ +G+N N +LG G R PE ++ + R ++KQ
Sbjct: 241 DEVFTFGSNKNLSLGLGDGDDRQFPERINLTRPDHLLYRFYRERENLKQEQGLKTDETNE 300
Query: 67 --------------------VCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVS 104
V M K H+ ++DD ++ CG G GGRLG G E++
Sbjct: 301 PGTTADLPIKIRSQPLTFQDVKMSKLHTAILTDDPESNLYMCGFGPGGRLGTGDEAT--- 357
Query: 105 PKKLNF-------EKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSH 157
+ NF K + VA+ QDHS+ + G VF G N + QLG S P ++
Sbjct: 358 --RFNFVCIENGGAAGKKIVNVALG---QDHSIAISDQGEVFTWGSNKYGQLGYSLPRTN 412
Query: 158 IVSPTPIPRSSLKSSQPL-----IGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSS 212
PI + + P I HSVVY+S +YTFG + GQLG S
Sbjct: 413 QKDELPIQTTPRQVFNPFKKETIIAAAASAIHSVVYTSTSIYTFGKNEGQLGLIDADARS 472
Query: 213 --ASVIEPKVQATIIRE 227
VI KV A++ +
Sbjct: 473 LEMQVIPRKVGASLFNQ 489
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 109/237 (45%), Gaps = 20/237 (8%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
SN VY WG LG G+ +P+ + +LK +KQ+ H + ++ DG V
Sbjct: 82 SNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVL 141
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
G Q G+LGLG V++P KL FE + V M + +H+ + +G ++ G
Sbjct: 142 GWGRNQNGQLGLGHTEDVLTPHKLTAFE----GVAVKMLAAGAEHTTAVTENGKLYGWGW 197
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
+ LGL +V P + + + + + V CG H++ V S +YTFG G
Sbjct: 198 GRYGNLGLGDREDRLV-PDQV---AAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYG 253
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGW 258
QLGH + +I +VQA ++ I G +H+F ++ G +G GW
Sbjct: 254 QLGHGDF---ADHLIPHQVQALKSKK-----IQAITGGWRHTFALDSD-GRLYGWGW 301
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG N +G G+ + + P+L+ L+ + V H++ ++D G V+S G G
Sbjct: 296 LYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGT 355
Query: 91 GGRLGLGSESSVVSPKKLNF 110
G+LG G +PK++
Sbjct: 356 SGQLGHGDTVDRSTPKRIEI 375
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y +G + LG G +P + +LK I+ + H+ + DGR++ G +
Sbjct: 244 MYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNK 303
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G++G G+ SP+ + +D+ V + H++ + G+V+ G + QLG
Sbjct: 304 FGQVGCGNTEDQSSPQLVKGLQDQV---VTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLG 360
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 119/233 (51%), Gaps = 19/233 (8%)
Query: 31 VYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG + LG G ++T +P+ + +L I QV +HS+ +S+DG+V+S G
Sbjct: 68 VFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKN 127
Query: 90 QGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG E S SP+++ + + + +A + HS L LSG+ F G N+ Q
Sbjct: 128 SHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 184
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHS 206
L LS + + P+ +LK+ ++ + CG H+ V + +V+TFG ++ GQLGH
Sbjct: 185 LALSGNNAPVQRYKPVLVGALKTLS-VVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHD 243
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGP--EFGGG 257
S+A P+ + E + G + + + G+ H+ + G FG G
Sbjct: 244 ----STAEKRGPQ-----LVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFGRG 287
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 8/181 (4%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V+ WG N++ LG G + ++ P+ + SL+ + QV HS +S G + G
Sbjct: 120 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGS 179
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+L L ++ V K L V S +H+ L G VF G NS+ Q
Sbjct: 180 NNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQ 239
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV--VYSSREVYTFGIHAGQLGHS 206
LG + P + R SQ + CG +H++ VY++ +V +FG G S
Sbjct: 240 LG-HDSTAEKRGPQLVERIEGLVSQ----IDCGSYHTLAYVYTTGQVVSFGRGPGCTRSS 294
Query: 207 P 207
P
Sbjct: 295 P 295
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 18/188 (9%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ + DG V SCG G+LG P+++ + L VA+ S ++HS+ +
Sbjct: 6 HSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI---PALETLHVALVSCGKEHSLAV 62
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS-SLKSSQPLIGVCCGRFHSVVYSSR 191
G VF G S QLG+ + T IP+ + +I V CG +HS+ S
Sbjct: 63 CHKGRVFAWGAASEGQLGI----GELKETTFIPKKIKTLADIKIIQVACGHYHSLALSED 118
Query: 192 -EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETS 249
+V+++G ++ GQLG S AS P+ ++ E +P + + G HSF S
Sbjct: 119 GQVFSWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP--LAQVAAGGAHSFALSLS 171
Query: 250 LGPEFGGG 257
G FG G
Sbjct: 172 -GTSFGWG 178
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 11/176 (6%)
Query: 35 GTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRL 94
G N+ LG + PE + +L+ + V K HS+ V GRV++ G G+L
Sbjct: 20 GDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 79
Query: 95 GLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
G+G + + PKK+ D + VA HS+ L G VF G NS QLGL
Sbjct: 80 GIGELKETTFIPKKIKTLADIKIIQVACGHY---HSLALSEDGQVFSWGKNSHGQLGLGK 136
Query: 154 PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI---HAGQLGHS 206
SP + SL+ PL V G HS S +FG +AGQL S
Sbjct: 137 EFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGT-SFGWGSNNAGQLALS 188
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR---- 82
Q ++Y G N LG G+Q P L+ +LK + V +HS+ V+ D R
Sbjct: 143 QDGKLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASN 202
Query: 83 ----VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSV 138
V+S G G+LG ++PK + + + V + HSVF+ + G V
Sbjct: 203 QQTTVYSVGRNDNGQLGQEHTCHEITPKII---RSLNTRQVIQTACGLHHSVFVTVHGEV 259
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV-YSSREVYTFG 197
F CG N QLG + S P+ SLK ++ ++ CG +H++V + E+Y FG
Sbjct: 260 FSCGFNDNGQLGHNDTKSR---NQPVLIESLK-NKFIVQAACGYYHTLVRRDTGEIYAFG 315
Query: 198 IH-AGQLGHSPVTVSSASVIEPK 219
+ GQLG + + ++I+PK
Sbjct: 316 RNDKGQLG---IETNGQALIQPK 335
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+++G N+ LG G Q R +P + ++ Q+ H ++ +G V + G
Sbjct: 41 VFVFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNG 100
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ S+ +PKK+ K+ ++ A+ ++ ++ + G ++ CG N++ QLG
Sbjct: 101 SGQLGHGNNKSISTPKKIESLKNIRITHISSANGCENLAI-ISQDGKLYTCGYNNYGQLG 159
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS---------SREVYTFGIH-A 200
S++ +PT + +LK +Q + V C +HS++ + VY+ G +
Sbjct: 160 -HGTQSNLSTPTLV--QALKDTQ-VTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDN 215
Query: 201 GQLGHSPVTVSSASVIEPKV 220
GQLG + I PK+
Sbjct: 216 GQLGQE----HTCHEITPKI 231
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 3/150 (2%)
Query: 15 LIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHS 74
LI + + +SNQ VY G N N LG P+++ SL + Q HS
Sbjct: 191 LIVTQDMRQASNQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHS 250
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML 134
VFV+ G V+SCG G+LG S P + E K+K + A+ H++
Sbjct: 251 VFVTVHGEVFSCGFNDNGQLGHNDTKSRNQP--VLIESLKNKF-IVQAACGYYHTLVRRD 307
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPI 164
+G ++ G N QLG+ ++ P I
Sbjct: 308 TGEIYAFGRNDKGQLGIETNGQALIQPKQI 337
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 38/68 (55%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ K+ +I ++ +HS+ + + G++++ G G G+LG G+ PK++
Sbjct: 391 PQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVASLH 450
Query: 113 DKDKLGVA 120
DK +G+A
Sbjct: 451 DKKVIGIA 458
>gi|452989542|gb|EME89297.1| hypothetical protein MYCFIDRAFT_126382 [Pseudocercospora fijiensis
CIRAD86]
Length = 1545
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 13 DHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF 72
DHL R+ ++ SS+ N YI AN T D+P ++ S + I+ V M K
Sbjct: 272 DHL-REHELKWSSH--NPAYI-PRAAN----TPGMWIEDIPWVVRS-RPIVIQDVFMSKL 322
Query: 73 HSVFVSDDG--RVWSCGHGQGGRLGLGSESS-----VVSPKKLNFEKDKDKLGVAMASIS 125
H+ ++ DG ++ CGHGQGGRLG G E + V L ++ VA ++
Sbjct: 323 HTAVLTTDGVSNMYICGHGQGGRLGTGDERTRFHFVCVEGGGLAGKR------VATVALG 376
Query: 126 QDHSVFLMLSGSVFVCGLNSFHQLGLSPP--PSHIVSPTPIPRSSLK--SSQPLIGVCCG 181
Q+H++ L G + G N F QLG S P PS + + +PR + + GV
Sbjct: 377 QNHTLALTDDGDCYSWGQNGFGQLGYSLPKLPSEDEAISVLPRQIFGPLKRETVTGVAAS 436
Query: 182 RFHSVVYSSREVYTFGIHAGQLG 204
R HSV ++S ++TFG + GQLG
Sbjct: 437 RIHSVAHTSTSLFTFGKNEGQLG 459
>gi|242764350|ref|XP_002340753.1| BTB domain and ankyrin repeat protein [Talaromyces stipitatus ATCC
10500]
gi|218723949|gb|EED23366.1| BTB domain and ankyrin repeat protein [Talaromyces stipitatus ATCC
10500]
Length = 1696
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 55/248 (22%)
Query: 11 PIDHLIRDRKIDVSSN-QFNEVYIWGTNANYNLGTGSQQTRDVPELL------------- 56
P D ++ ++ +N Q +EV+ +G+N N LG G + R PE +
Sbjct: 234 PEDGILARAQLKARTNLQGDEVFTFGSNKNMTLGLGDEDDRQFPERISLDRPDHLLQRFF 293
Query: 57 ---------------------------DSL------KRASIKQVCMDKFHSVFVSDD--G 81
D+L K S++ V M K H+ +++D
Sbjct: 294 MEREKAREHQEQRSTLFGQAIGHADNQDNLPTLITSKPLSVQDVYMSKLHTAVLTNDPES 353
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
++ G G GGRLG G E++ + K +++A + QDHS+ + G VF
Sbjct: 354 NLYMSGFGPGGRLGTGDEATRYHFVCIETGGLAGKKVISLA-LGQDHSIAISEQGEVFTW 412
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQP-----LIGVCCGRFHSVVYSSREVYTF 196
G N + QLG + P ++ TP+ + + P ++G HSVV+SS +YTF
Sbjct: 413 GSNKYGQLGYNLPRANNKRDTPMQSTPRQVFNPFKREVILGAAASAIHSVVFSSSGLYTF 472
Query: 197 GIHAGQLG 204
G + GQLG
Sbjct: 473 GKNEGQLG 480
>gi|396498441|ref|XP_003845231.1| similar to BTB domain and ankyrin repeat protein [Leptosphaeria
maculans JN3]
gi|312221812|emb|CBY01752.1| similar to BTB domain and ankyrin repeat protein [Leptosphaeria
maculans JN3]
Length = 1640
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 98/235 (41%), Gaps = 64/235 (27%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPE---------LLDSLKRAS---------------- 63
+EV+ +G+N N LG G + R PE LL R
Sbjct: 234 DEVFTFGSNKNVTLGFGDEDDRQYPERITIRRPDHLLQRFYREHRERQNQYWAAMGLPAP 293
Query: 64 -----------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGS 98
I+ V M K H+ ++ D ++ CGHG GGRLG GS
Sbjct: 294 DLGPAQPKGTVELPTHVRNTPIVIQDVRMSKLHTAVLTTDPVSNLYMCGHGPGGRLGTGS 353
Query: 99 ESSVVSPKKLNFE-KDKDKLG---VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPP 154
E++ + F + LG VA ++ Q+H++ + G ++ G N++ QLG + P
Sbjct: 354 ETT-----RYQFTCIEGGGLGQKKVAAVALGQNHTLAITEEGEIYSWGNNAYGQLGYTLP 408
Query: 155 PSHIVSPTPIPRSSLKSSQPL-----IGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ PI + PL GV R HSVV+++ +YTFG + GQLG
Sbjct: 409 KPTLKDDDPISTIPRQIFGPLKREIVAGVSASRIHSVVHTTTSLYTFGKNEGQLG 463
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 89/187 (47%), Gaps = 15/187 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD--SLKRASIKQVCMDKFHSVFVSDD 80
++++ + +Y+ G LGTGS+ TR ++ L + + V + + H++ ++++
Sbjct: 330 LTTDPVSNLYMCGHGPGGRLGTGSETTRYQFTCIEGGGLGQKKVAAVALGQNHTLAITEE 389
Query: 81 GRVWSCGHGQGGRLG-------LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLM 133
G ++S G+ G+LG L + + + + F K ++ VA S S+ HSV +
Sbjct: 390 GEIYSWGNNAYGQLGYTLPKPTLKDDDPISTIPRQIFGPLKREI-VAGVSASRIHSV-VH 447
Query: 134 LSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS--SQPLIGVCCGRFHSV-VYSS 190
+ S++ G N QLG+ + + IPR + S P+ V ++ + +
Sbjct: 448 TTTSLYTFGKNE-GQLGIVDSDARSLEMQTIPRKIAAALFSSPIHSVSAIDGATICLLEN 506
Query: 191 REVYTFG 197
REV+ F
Sbjct: 507 REVWVFA 513
>gi|134025900|gb|AAI34575.1| RPGR protein [Bos taurus]
Length = 620
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 12/236 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N+++++G+N LG GS+ T + P + +LK +K V + H++ ++ G+V++ G
Sbjct: 99 NKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHTLILTGGGQVYATGG 158
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G ++ G +
Sbjct: 159 NNEGQLGLGDTDERSAFHLISFFTSQHK--IKQLSAGSNTSAALTAEGELYTFGEPESGK 216
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLGHSP 207
LGL PP +V+ +P+ S+ +I V CG H+VV + + VYTFG+ GQLG
Sbjct: 217 LGL--PPKLLVN-HKVPQLVPGISEKVIQVACGGGHTVVLTEKAVYTFGLGQFGQLGLGT 273
Query: 208 VTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKG 263
T ++ EPKV ++ + + N + E+ L FG G GK G
Sbjct: 274 FTFETS---EPKVIESVKDKKISHVCCGENHT---ALITESGLLYTFGDGRHGKLG 323
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 31 VYIWGTN--ANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY +G LGT + +T + P++++S+K I VC + H+ +++ G +++ G
Sbjct: 258 VYTFGLGQFGQLGLGTFTFETSE-PKVIESVKDKKISHVCCGENHTALITESGLLYTFGD 316
Query: 89 GQGGRLGLGSES 100
G+ G+LGLG E+
Sbjct: 317 GRHGKLGLGMEN 328
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 94/185 (50%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG T + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQ 163
Query: 89 GQGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ K D + +A + HS L LSG+VF G NS
Sbjct: 164 NSYGQLGLGKECPSQASPQRV---KSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L SQ ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDERDRESPCHV---------KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDVPE--LLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG ++ G GS VPE + + ++K+V HSVF+ +DG V++CG
Sbjct: 4 WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+LG E S P+++ + + VA + HS+ L G +F G S QLGL
Sbjct: 64 GQLGHDCEGS--KPEQIGALAGQHIVHVACG---ESHSLALSDQGQLFSWGAGSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVT 209
+ + P I + + Q ++ V CG +H + ++ + +T+G ++ GQLG
Sbjct: 119 TTIEDAVTVPRLIKK---LNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKEC 175
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
S AS P+ ++ + +P + + G HSF S G FG G
Sbjct: 176 PSQAS---PQRVKSL--DGIP--LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 71/137 (51%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N++ LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSV-FLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G ++ I+ + H++ F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|37360370|dbj|BAC98163.1| mKIAA1417 protein [Mus musculus]
Length = 1167
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
+ +DH+V L G V+ GLN FHQLG+ PPP+ P I LK + +IGV GRF
Sbjct: 51 VFKDHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLKG-RTIIGVAAGRF 109
Query: 184 HSVVYSSREVYTFGIHAGQLGH 205
H+V+++ VYT G++ GQLGH
Sbjct: 110 HTVLWTREAVYTLGLNGGQLGH 131
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 94/185 (50%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG T + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQ 163
Query: 89 GQGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ K D + +A + HS L LSG+VF G NS
Sbjct: 164 NSYGQLGLGKECPSQASPQRV---KSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L SQ ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDERDRESPCHV---------KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDVPE--LLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG ++ G GS +PE + + ++K+V HSVF+ +DG V++CG
Sbjct: 4 WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+LG E S P+++ + + VA + HSV L G +F G S QLGL
Sbjct: 64 GQLGHDCEGS--KPEQIGALAGQHIVHVACG---ESHSVALSDQGQLFSWGAGSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVT 209
+ + P I + + Q ++ V CG +H + ++ + +T+G ++ GQLG
Sbjct: 119 TTIEDAVTVPRLIKK---LNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKEC 175
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
S AS P+ ++ + +P + + G HSF S G FG G
Sbjct: 176 PSQAS---PQRVKSL--DGIP--LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 71/137 (51%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N++ LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSV-FLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G ++ I+ + H++ F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SP+ + K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGIDYKKQASPQLI-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYF---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R P LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG + SP+ + K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGIDYKKQASPQLI-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ P SL+ +Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYF---PNLLKSLR-TQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 268 AGGYGQLGHN----STSHEINPR 286
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R P LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
>gi|296470595|tpg|DAA12710.1| TPA: retinitis pigmentosa GTPase regulator [Bos taurus]
Length = 308
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 10/215 (4%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD 70
PI D +++ N+++++G+N LG GS+ T + P + +LK +K V
Sbjct: 82 PISLSCGDEHTAITTGN-NKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACG 140
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
+ H++ ++ G+V++ G G+LGLG + ++F + K + S + S
Sbjct: 141 RNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHK--IKQLSAGSNTSA 198
Query: 131 FLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
L G ++ G +LGL PP +V+ +P+ S+ +I V CG H+VV +
Sbjct: 199 ALTAEGELYTFGEPESGKLGL--PPKLLVN-HKVPQLVPGISEKVIQVACGGGHTVVLTE 255
Query: 191 REVYTFGI-HAGQLGHSPVTVSSASVIEPKVQATI 224
+ VYTFG+ GQLG T ++ EPKV ++
Sbjct: 256 KAVYTFGLGQFGQLGLGTFTFETS---EPKVIESV 287
>gi|302663849|ref|XP_003023562.1| BTB domain and ankyrin repeat protein [Trichophyton verrucosum HKI
0517]
gi|291187565|gb|EFE42944.1| BTB domain and ankyrin repeat protein [Trichophyton verrucosum HKI
0517]
Length = 1644
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 46/220 (20%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL------------------DSLKRAS------- 63
+E++ +G+N N +LG G R PE + +SL+ +
Sbjct: 238 DELFTFGSNKNLSLGVGDSDDRQFPERITLPRPEALIHRFYEEKYENSLESETPEEIPFL 297
Query: 64 -------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
++ V M K H+ ++ D ++ CG G GGRLG G E + SP ++
Sbjct: 298 IRSTPLIVQDVVMSKLHTAILTTDPCSNLYMCGFGPGGRLGTGHEGTSFSPVCVDTGAIT 357
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV--SPTPIPRSSLKSS 172
K + ++ DH++ + G VF G N + QLG + P + SP +P + L
Sbjct: 358 GKR-ITTVALGLDHTIAISDQGEVFTWGSNKYGQLGYTLPKTKPTASSPNDVP-TQLSPR 415
Query: 173 Q--------PLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
Q ++G HSVV++S +YTFG + GQLG
Sbjct: 416 QIFNPFKRDRILGAAASSIHSVVFTSSALYTFGRNDGQLG 455
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 113/236 (47%), Gaps = 18/236 (7%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S F +VY WG LG G+ P+ + +L IKQ+ H + V+ DG V
Sbjct: 84 SESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQ 143
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
S G Q G+LGLG+ + P+K+ + + V M + +H+ + G ++ G
Sbjct: 144 SWGRNQNGQLGLGTTEDSLVPQKIQAFQ---GVSVKMVAAGAEHTAAVTEDGELYGWGWG 200
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ LGL +V P S+++ + ++ V CG H++ V SS +YT+G GQ
Sbjct: 201 RYGNLGLGDRNDRLV---PEKVSTVEGVK-MVKVACGWRHTISVSSSGGLYTYGWSKYGQ 256
Query: 203 LGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGW 258
LGH + K++A ++E+L I E + G +H+ A TS G +G GW
Sbjct: 257 LGHGDF---EDHLTPHKLEA--LQENL---ISEISGGWRHTM-ALTSDGKLYGWGW 303
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 9/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E+Y WG NLG G + R VPE + +++ + +V H++ VS G +++ G
Sbjct: 193 ELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWS 252
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G ++P KL E ++ L ++ S H++ L G ++ G N F Q+
Sbjct: 253 KYGQLGHGDFEDHLTPHKL--EALQENL-ISEISGGWRHTMALTSDGKLYGWGWNKFGQV 309
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLGH 205
G+ H SP + Q ++ + CG H++ + R+ V+++G GQLGH
Sbjct: 310 GVGDNVDH-CSPVQV---KFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGH 363
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 15/180 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV WG N N LG G+ + VP+ + + + S+K V H+ V++DG ++ G G
Sbjct: 141 EVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWG 200
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFH 147
+ G LGLG + + P+K++ + GV M ++ H++ + SG ++ G + +
Sbjct: 201 RYGNLGLGDRNDRLVPEKVSTVE-----GVKMVKVACGWRHTISVSSSGGLYTYGWSKYG 255
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF-HSVVYSSR-EVYTFGIHA-GQLG 204
QLG H+ TP +L+ + LI G + H++ +S ++Y +G + GQ+G
Sbjct: 256 QLGHGDFEDHL---TPHKLEALQ--ENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVG 310
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 30/266 (11%)
Query: 1 MTVMDNEEMRPI----DHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELL 56
++ +D +++ I DH + S NE+Y WG LG G+ +P+ +
Sbjct: 59 LSALDAQQIDSIACGADHTL------AYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPI 112
Query: 57 DSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLG-SESSVVSPKKLNFEKDKD 115
+L+ IKQ+ H + V+ +G V S G Q G+LGLG SE S+V K F+
Sbjct: 113 IALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQ---- 168
Query: 116 KLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
+ + M + +HSV + +G ++ G + LGL + P SS+ + +
Sbjct: 169 GVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWI---PEKVSSVDCDK-M 224
Query: 176 IGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFI 233
+ V CG H++ SS +YT+G GQLGH S++ K+QA + I
Sbjct: 225 VMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNF---EDSLVPQKLQALSDK-----LI 276
Query: 234 FESNRGTKHSFTAETSLGPEFGGGWT 259
+ + G +HS A TS G +G GW
Sbjct: 277 SQVSGGWRHSM-ALTSTGLLYGWGWN 301
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 10/210 (4%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD 70
PI + + V+ + E+Y WG NLG G + R +PE + S+ + V
Sbjct: 171 PIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACG 230
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
H++ VS G +++ G + G+LG G+ + P+KL DK ++ S HS+
Sbjct: 231 WRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKL---ISQVSGGWRHSM 287
Query: 131 FLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
L +G ++ G N F Q+G+ ++ +P+ + Q ++ + CG H++ +
Sbjct: 288 ALTSTGLLYGWGWNKFGQVGVG---DNVDRCSPV-QVKFPHDQKVVQISCGWRHTIAVTE 343
Query: 191 RE-VYTFGIHA-GQLGH-SPVTVSSASVIE 217
+E V+++G GQLGH V +S +IE
Sbjct: 344 KENVFSWGRGTNGQLGHGDTVDRNSPKIIE 373
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 30/266 (11%)
Query: 1 MTVMDNEEMRPI----DHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELL 56
++ +D +++ I DH + S NE+Y WG LG G+ +P+ +
Sbjct: 59 LSALDAQQIDSIACGADHTL------AYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPI 112
Query: 57 DSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLG-SESSVVSPKKLNFEKDKD 115
+L+ IKQ+ H + V+ +G V S G Q G+LGLG SE S+V K F+
Sbjct: 113 IALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQ---- 168
Query: 116 KLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
+ + M + +HSV + +G ++ G + LGL + P SS+ + +
Sbjct: 169 GVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWI---PEKVSSVDCDK-M 224
Query: 176 IGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFI 233
+ V CG H++ SS +YT+G GQLGH S++ K+QA + I
Sbjct: 225 VMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNF---EDSLVPQKLQALSDK-----LI 276
Query: 234 FESNRGTKHSFTAETSLGPEFGGGWT 259
+ + G +HS A TS G +G GW
Sbjct: 277 SQVSGGWRHSM-ALTSTGLLYGWGWN 301
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 10/210 (4%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD 70
PI + + V+ + E+Y WG NLG G + R +PE + S+ + V
Sbjct: 171 PIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACG 230
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
H++ VS G +++ G + G+LG G+ + P+KL DK ++ S HS+
Sbjct: 231 WRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKL---ISQVSGGWRHSM 287
Query: 131 FLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
L +G ++ G N F Q+G+ ++ +P+ + Q ++ + CG H++ +
Sbjct: 288 ALTSTGLLYGWGWNKFGQVGVG---DNVDRCSPV-QVKFPHDQKVVQISCGWRHTIAVTE 343
Query: 191 RE-VYTFGIHA-GQLGH-SPVTVSSASVIE 217
+E V+++G GQLGH V +S +IE
Sbjct: 344 KENVFSWGRGTNGQLGHGDTVDRNSPKIIE 373
>gi|327302578|ref|XP_003235981.1| hypothetical protein TERG_03033 [Trichophyton rubrum CBS 118892]
gi|326461323|gb|EGD86776.1| hypothetical protein TERG_03033 [Trichophyton rubrum CBS 118892]
Length = 1642
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 44/219 (20%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL------------------DSLKRASIKQ---- 66
+E++ +G+N N +LG G R PE + +SL+ ++++
Sbjct: 238 DELFTFGSNKNISLGVGDSDDRQFPERITLPRPEALIRRFFEEKYENSLESETLEEIPFL 297
Query: 67 ----------VCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
V M K H+ ++ D ++ CG G GGRLG G E + SP ++
Sbjct: 298 IRSKPLIVQDVVMSKLHTAILTTDPCSNLYMCGFGPGGRLGTGHEGTSFSPVCVDSGAIT 357
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT----PIPRSSLK 170
K + ++ DH++ + G VF G N + QLG + P + + + PI S +
Sbjct: 358 GK-RITTVALGLDHTIAISDQGEVFTWGSNKYGQLGYTLPKTKPTASSPNDVPIQLSPRQ 416
Query: 171 SSQP-----LIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
P ++G HSVV++S +YTFG + GQLG
Sbjct: 417 IFNPFKRDRILGAAASSIHSVVFTSSALYTFGRNDGQLG 455
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 42/254 (16%)
Query: 4 MDNEEMRPIDHLIRDRKIDV-------------SSNQFNEVYIWGTNANYNLGTGSQQTR 50
+++E + I LIR + + V +++ + +Y+ G LGTG + T
Sbjct: 286 LESETLEEIPFLIRSKPLIVQDVVMSKLHTAILTTDPCSNLYMCGFGPGGRLGTGHEGTS 345
Query: 51 DVPELLDS--LKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGL---------GSE 99
P +DS + I V + H++ +SD G V++ G + G+LG S
Sbjct: 346 FSPVCVDSGAITGKRITTVALGLDHTIAISDQGEVFTWGSNKYGQLGYTLPKTKPTASSP 405
Query: 100 SSV---VSPKKL--NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPP 154
+ V +SP+++ F++D+ LG A +SI HSV + S +++ G N QLGL
Sbjct: 406 NDVPIQLSPRQIFNPFKRDR-ILGAAASSI---HSV-VFTSSALYTFGRND-GQLGLMDA 459
Query: 155 PSHIVSPTPIPR---SSLKSSQPLIGVCCG--RFHSVVYSSREVYTFGIHAGQLGHSPVT 209
+ ++ PIPR +SL S I C R V+ + EV+ F + P+T
Sbjct: 460 DARSLTLQPIPRKVGASLFSVS--ISTVCAIERATVVLLENHEVWVFTHYGYSKLIFPLT 517
Query: 210 VSSASVIEPKVQAT 223
S +S I AT
Sbjct: 518 GSVSSFIRSSFMAT 531
>gi|353241635|emb|CCA73437.1| hypothetical protein PIIN_07391 [Piriformospora indica DSM 11827]
Length = 1411
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPE-------------LLDSLKRASIKQVCMDKFHSVF 76
E+Y WG+N N LG G R PE L D LK I V M K H+
Sbjct: 168 ELYTWGSNRNATLGLGDGDDRMYPEQVIVRRNDYTAGQLFDRLKPVPITDVYMSKTHTTI 227
Query: 77 VSDDGR--VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFL 132
++ + + + +CG GG + G S S + +F ++ + S++ QDH++ +
Sbjct: 228 LTAESKSNIRTCGFLSGGHVARGQ--SAHSQMQYSFINPQETFPHKLISLALGQDHTLAV 285
Query: 133 MLSGSVFVCGLNSFHQLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV 187
+G V G N F QLG + + V TP + +Q ++GV C + S
Sbjct: 286 TSAGEVLSWGFNRFAQLGYAIEGTGKAVDNQVQATPRKVTGPLRNQRVLGVACCKTASAC 345
Query: 188 YSSREVYTFGIHAGQLGH--SPVTVSSASVIEPKV 220
+++ +++T+G + GQLG+ S + V V +P+V
Sbjct: 346 WTATQLFTWGTNGGQLGYDISHLYVDKEKVAQPQV 380
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E+Y WG+N++ LG GS ++ P+L+ SL I V +H++ +S G V++ G
Sbjct: 157 ELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGR 216
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL + P +L ++ V A+ ++ SVFL + G VF CG + Q
Sbjct: 217 NTFGQLGLSDIQNRNVPCQLRTLRNSR---VCYAACGEEFSVFLTMDGGVFTCGAGMYGQ 273
Query: 149 LGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGI-HAGQLG 204
LG S I +PR ++ + + CGR H+ +V S VY +G+ AGQLG
Sbjct: 274 LGHGNKTSEI-----LPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328
Query: 205 H 205
+
Sbjct: 329 N 329
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 118/247 (47%), Gaps = 21/247 (8%)
Query: 26 NQFNEVYIWGTNANYNLGTG--SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
N++ +++ WG+N LG S R+ P ++ +L I Q+ HS+ ++++G +
Sbjct: 100 NEWGQLFSWGSNVEGQLGLDRVSATIRE-PRMVKTLGTKIIVQIACGLKHSIALTNNGEL 158
Query: 84 WSCGHGQGGRLGLGSESSV-VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G G+LGLGS++ + + PK ++ + +A + H++ + SG+VF G
Sbjct: 159 YAWGSNSDGQLGLGSDTKMELKPKLVH---SLAAVPIAFVACGGYHTIVISKSGAVFAWG 215
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAG 201
N+F QLGLS + V P +L++S+ C F + V+T G G
Sbjct: 216 RNTFGQLGLSDIQNRNV---PCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYG 272
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEF--GGGWT 259
QLGH + S I P+ I E + + + + G +H+ S G + G G
Sbjct: 273 QLGHG----NKTSEILPRQ----IMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGA 324
Query: 260 GKKGKRL 266
G+ G R+
Sbjct: 325 GQLGNRI 331
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++ WG+ + LG G + ++ P ++ K I+Q+ +++ V+ +G+V+SCG+
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG K+L D L A+ H++ + G +F G N Q
Sbjct: 61 NDHGQLGQEK-----GRKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQ 115
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
LGL + I P + K ++ + CG HS+ ++ E+Y +G ++ GQLG
Sbjct: 116 LGLDRVSATIREPRMVKTLGTKI---IVQIACGLKHSIALTNNGELYAWGSNSDGQLG 170
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 17 RDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSV 75
R+ + V+ N +Y WG N LGTG ++ + P L+DS L S+ + +FH+V
Sbjct: 98 RNHTVVVTDNGL--IYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTV 155
Query: 76 FVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
+ +G +WS G Q G+LG G+ + P ++ K + A+ H++ L +
Sbjct: 156 AICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICI---RAACGGQHTLVLTDA 212
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVC---CGRFHSV-VYSSR 191
++ G N++ QLGL+ ++ P + L+ S G C CG HS+ + +
Sbjct: 213 NKIYAWGSNAYGQLGLNRSDKAVLQPDIV--DHLRRS----GACHVLCGYSHSMALMKNE 266
Query: 192 EVYTFGIH-AGQLG-----HSPV 208
++YT+G + GQLG HSPV
Sbjct: 267 QIYTWGRNDCGQLGLGHYTHSPV 289
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 19/185 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP------ELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
VY WG N LG G T +VP L D L R +++ + K HS +++DG V+
Sbjct: 1 VYSWGKNKYGQLGLG--HTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVY 58
Query: 85 SCGHGQGGRLGLGSESSVVSPKKL--NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
+ G G G+LG VV+ +L + + G + + ++H+V + +G ++ G
Sbjct: 59 TWGRGWEGQLG----HDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWG 114
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-A 200
N QLG S S +P+ S + ++ + CG FH+V + ++++G +
Sbjct: 115 ENKAGQLGTGDLKS---SNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQC 171
Query: 201 GQLGH 205
GQLGH
Sbjct: 172 GQLGH 176
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 19/121 (15%)
Query: 5 DNEEMRP--IDHLIRDRKIDVSSN--------QFNEVYIWGTNANYNLGTGSQQTRDVPE 54
D ++P +DHL R V + ++Y WG N LG G VPE
Sbjct: 232 DKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHSPVPE 291
Query: 55 LLDSLKRASIKQVCMDKFHSV-FVSDD--------GRVWSCGHGQGGRLGLGSESSVVSP 105
L+ +L+ ++Q+ H V FV+D+ V+S G G+ G+LG S +P
Sbjct: 292 LVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHNELLSRCTP 351
Query: 106 K 106
+
Sbjct: 352 R 352
>gi|212529146|ref|XP_002144730.1| BTB domain and ankyrin repeat protein [Talaromyces marneffei ATCC
18224]
gi|210074128|gb|EEA28215.1| BTB domain and ankyrin repeat protein [Talaromyces marneffei ATCC
18224]
Length = 1625
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 28/210 (13%)
Query: 10 RPIDHLIR---DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQ 66
RP DHL+R + D +Q ++G ++ + D+P L+ S K SI+
Sbjct: 287 RP-DHLLRRFFTEREDTREHQEQRSSLFGQATSH-----TDDQCDLPTLITS-KPLSIQD 339
Query: 67 VCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESS-----VVSPKKLNFEKDKDKLGV 119
V M K H+ +++D ++ G G GGRLG G E++ + L+ +K V
Sbjct: 340 VYMSKLHTAVLTNDPESNLYMSGFGPGGRLGTGDEATRFHFVCIETGGLSGKK------V 393
Query: 120 AMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL---- 175
++ QDHS+ + G VF G N + QLG + P ++ P+ + + PL
Sbjct: 394 ISLALGQDHSIAISEQGEVFTWGSNKYGQLGYNLPRANNKRDIPMQSTPRQVFNPLKREV 453
Query: 176 -IGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+G HSVV+S+ +YTFG + GQLG
Sbjct: 454 ILGAAASSIHSVVFSASSLYTFGKNEGQLG 483
>gi|330845272|ref|XP_003294517.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
gi|325075008|gb|EGC28958.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
Length = 594
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 6/176 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG N LG G Q R+ P ++ RA+ + HS+ VS+ G +++ G G
Sbjct: 128 LYSWGCNRWGQLGLGDQINRNQPTRINHSDRATFVAIACGSQHSMIVSNFGELYTFGCGT 187
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLGLG ES P ++ K + + HS + +G ++ G N + QLG
Sbjct: 188 TGRLGLGDESPRFKPTVVSSLVGKQIVSCGAGVM---HSSCVDSTGKIYSFGWNRYGQLG 244
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
SH + P + + + S + V CG+ H++ S+ E+ +FG +A GQLG
Sbjct: 245 TGSVKSHTL-PAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFNACGQLG 299
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
F E+Y +G LG G + R P ++ SL I HS V G+++S
Sbjct: 176 NFGELYTFGCGTTGRLGLGDESPRFKPTVVSSLVGKQIVSCGAGVMHSSCVDSTGKIYSF 235
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G + G+LG GS S P K+ + K+ ++H++ L +G + G N+
Sbjct: 236 GWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFNAC 295
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
QLG+ SH+ P + ++ S+ ++ + G +HS+ V + E Y++G + G LG
Sbjct: 296 GQLGVG---SHLDQINP---TKIEFSEKVLDIATGYYHSLCVTDNGEAYSWGYMSDGGLG 349
Query: 205 HSPV 208
S V
Sbjct: 350 LSEV 353
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS----IKQVCMDKFHSVFVSDDGRVWS 85
++Y +G N LGTGS ++ +P + + S +K VC K H++ +S++G + S
Sbjct: 231 KIYSFGWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVC-GKNHTLALSNNGEMVS 289
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G G+LG+GS ++P K+ F + V + HS+ + +G + G S
Sbjct: 290 FGFNACGQLGVGSHLDQINPTKIEFSEK-----VLDIATGYYHSLCVTDNGEAYSWGYMS 344
Query: 146 FHQLGLSPPPSHIVSPTPIP 165
LGLS +H P IP
Sbjct: 345 DGGLGLSEVYTHQTKPKLIP 364
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E+Y WG+N+ LG G+ + +P L+ SL I + HS VS G ++ G
Sbjct: 167 ELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGK 226
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +S P +L + LGV S D SVFL G VF CG +F Q
Sbjct: 227 NTFGQLGLNDLNSRCYPTQL---RTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQ 283
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY--SSREVYTFGI-HAGQLG 204
LG + IV K +Q + CGR H++ + S ++Y FG+ GQLG
Sbjct: 284 LGHGSCSNEIVPRKVFELMGSKITQ----IACGRRHTLAFVPSRGKIYGFGLGGVGQLG 338
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ + +V+ WG+NA LG ++ R P ++ ++ + Q+ ++H + ++++G
Sbjct: 107 LALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNG 166
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVF 139
+++ G G+LG+G+ S V L + GV +A I+ +HS + SG++F
Sbjct: 167 ELYAWGSNSYGQLGIGTTSEKVPMPTL----IQSLAGVPIAFIACGGNHSFAVSKSGAIF 222
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIH 199
G N+F QLGL+ S P +L+S C F + + V+T G
Sbjct: 223 GWGKNTFGQLGLNDLNSRCY---PTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAG 279
Query: 200 A-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGW 258
GQLGH S ++ I P+ + E + I + G +H+ S G +G G
Sbjct: 280 TFGQLGHG----SCSNEIVPRK----VFELMGSKITQIACGRRHTLAFVPSRGKIYGFGL 331
Query: 259 TG 260
G
Sbjct: 332 GG 333
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
++ WG N LG +R P L +L+ ++ + C D F SVF++++G V++CG G
Sbjct: 221 IFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDF-SVFLTNEGGVFTCGAG 279
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV-FLMLSGSVFVCGLNSFHQ 148
G+LG GS S+ + P+K+ FE K + + + H++ F+ G ++ GL Q
Sbjct: 280 TFGQLGHGSCSNEIVPRKV-FELMGSK--ITQIACGRRHTLAFVPSRGKIYGFGLGGVGQ 336
Query: 149 LGLSPPPSH 157
LG+ +H
Sbjct: 337 LGIGMVGNH 345
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 18/234 (7%)
Query: 31 VYIWGTNANYNLGTG--SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+Y WG A+ LG G ++ VP +D + + +V H++F++ +G++++CG+
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 89 GQGGRLGLGSES-SVVSPKKLNFEK--DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G+LG ++ P+ F++ + + S HS+ L G VF G N+
Sbjct: 63 NDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNA 122
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQL 203
QLG PTP ++ ++ ++ + G++H + ++ E+Y +G ++ GQL
Sbjct: 123 VGQLGHDAENGR--QPTPRMIKAI-GAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQL 179
Query: 204 GHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
G + +S V P + ++ + FI G HSF S G FG G
Sbjct: 180 G---IGTTSEKVPMPTLIQSLAGVPI-AFI---ACGGNHSFAVSKS-GAIFGWG 225
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E+Y WG+N+ LG G+ + +P L+ SL I + HS VS G ++ G
Sbjct: 162 ELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGK 221
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +S P +L + LGV S D SVFL G VF CG +F Q
Sbjct: 222 NTFGQLGLNDLNSRCYPTQL---RTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQ 278
Query: 149 LGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSVVY--SSREVYTFGI-HAGQLG 204
LG + IV PR + + + CGR H++ + S ++Y FG+ GQLG
Sbjct: 279 LGHGSCSNEIV-----PRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLG 333
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 112/242 (46%), Gaps = 19/242 (7%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ + +V+ WG+NA LG ++ R P ++ ++ + Q+ ++H + ++++G
Sbjct: 102 LALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNG 161
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVF 139
+++ G G+LG+G+ S V L + GV +A I+ +HS + SG++F
Sbjct: 162 ELYAWGSNSYGQLGIGTTSEKVPMPTL----IQSLAGVPIAFIACGGNHSFAVSKSGAIF 217
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIH 199
G N+F QLGL+ S P +L+S C F + + V+T G
Sbjct: 218 GWGKNTFGQLGLNDLNSRCY---PTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAG 274
Query: 200 A-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGW 258
GQLGH S ++ I P+ + E + I + G +H+ S G +G G
Sbjct: 275 TFGQLGHG----SCSNEIVPRK----VFELMGSKITQIACGRRHTLAFVPSRGKIYGFGL 326
Query: 259 TG 260
G
Sbjct: 327 GG 328
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
++ WG N LG +R P L +L+ ++ + C D F SVF++++G V++CG G
Sbjct: 216 IFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDF-SVFLTNEGGVFTCGAG 274
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV-FLMLSGSVFVCGLNSFHQ 148
G+LG GS S+ + P+K+ FE K + + + H++ F+ G ++ GL Q
Sbjct: 275 TFGQLGHGSCSNEIVPRKV-FELMGSK--ITQIACGRRHTLAFVPSRGKIYGFGLGGVGQ 331
Query: 149 LGLSPPPSH 157
LG+ +H
Sbjct: 332 LGIGMVGNH 340
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 17/231 (7%)
Query: 31 VYIWGTNANYNLGTG--SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+Y WG A+ LG G ++ VP +D + + +V H++F++ +G++++CG+
Sbjct: 3 IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ LG + + K+ + + S HS+ L G VF G N+ Q
Sbjct: 63 NDHGQ--LGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQ 120
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHS 206
LG PTP ++ ++ ++ + G++H + ++ E+Y +G ++ GQLG
Sbjct: 121 LGHDAENGR--QPTPRMIKAI-GAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLG-- 175
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ +S V P + ++ + FI G HSF S G FG G
Sbjct: 176 -IGTTSEKVPMPTLIQSLAGVPI-AFI---ACGGNHSFAVSKS-GAIFGWG 220
>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 954
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 101/218 (46%), Gaps = 12/218 (5%)
Query: 10 RPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM 69
RPI H+ K V+ EVY WG+ + LG G + R+VP + +L R I+ V
Sbjct: 296 RPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALLRHRIEYVSC 355
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKL---NFEKDKDKLGVAMASISQ 126
H+ VSD V++ G G+ GRLGLG +P+++ F K + +
Sbjct: 356 GGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQR----IIKVVCGW 411
Query: 127 DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV 186
+ ++ L L G VF G S Q GL +SP I + ++ V CG HS+
Sbjct: 412 NFTIALSLEGRVFSWGKQSEGQCGLGFCDQDELSPCLIEK---LLDNRIVDVACGYTHSL 468
Query: 187 VYSSR-EVYTFGI-HAGQLGHSPVTVSSASVIEPKVQA 222
+S+ EV ++G+ GQLG V S I+ + A
Sbjct: 469 ALTSQHEVLSWGLGEYGQLGRGIVYQPSPESIDQSLFA 506
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 7/152 (4%)
Query: 55 LLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
L +L R I + HSV ++ G V+S G G+ GRLG G P+K+
Sbjct: 289 LEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKI---MAL 345
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQP 174
+ + S H+ + VF G +LGL H +P +P + Q
Sbjct: 346 LRHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCH-DTPQEVPTWGFR-KQR 403
Query: 175 LIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
+I V CG ++ S V+++G + GQ G
Sbjct: 404 IIKVVCGWNFTIALSLEGRVFSWGKQSEGQCG 435
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 107/232 (46%), Gaps = 19/232 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG G+ +P+ + +L+ IKQ+ H + V+ +G V S G
Sbjct: 88 EVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRN 147
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
Q G+LGLG+ + P+K+ + + + M + +HSV + +G ++ G + L
Sbjct: 148 QNGQLGLGTTEDSLVPQKIQTFQ---GVPIKMVAAGAEHSVAITENGELYGWGWGRYGNL 204
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHSP 207
GL IP ++ V CG H++ V SS E+YT+G GQLGH
Sbjct: 205 GLGDRNDRC-----IPEKVSVDCDKMVLVACGWRHTISVSSSGELYTYGWSKYGQLGHGD 259
Query: 208 VTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
++ K+QA + I + + G +H+ A T+ G +G GW
Sbjct: 260 C---KDHLVPHKLQAFSDK-----LICQVSGGWRHTM-ALTTGGQLYGWGWN 302
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD 70
PI + + V+ + E+Y WG NLG G + R +PE + S+ + V
Sbjct: 173 PIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKV-SVDCDKMVLVACG 231
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
H++ VS G +++ G + G+LG G + P KL DK + S H++
Sbjct: 232 WRHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKL---ICQVSGGWRHTM 288
Query: 131 FLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
L G ++ G N F Q+G+ ++ +P+ + Q + + CG H++ +
Sbjct: 289 ALTTGGQLYGWGWNKFGQVGVG---DNVDRCSPV-QVKFPHDQKVAQISCGWRHTIAVTE 344
Query: 191 RE-VYTFGIHA-GQLG 204
++ VY++G GQLG
Sbjct: 345 KDNVYSWGRGTNGQLG 360
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD 80
I VSS+ E+Y +G + LG G + VP L + I QV H++ ++
Sbjct: 236 ISVSSS--GELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTG 293
Query: 81 GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
G+++ G + G++G+G SP ++ F D+ VA S H++ + +V+
Sbjct: 294 GQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQK---VAQISCGWRHTIAVTEKDNVYS 350
Query: 141 CGLNSFHQLGL 151
G + QLG+
Sbjct: 351 WGRGTNGQLGI 361
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 20/238 (8%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S++ ++Y WG LG G+ P+ +++L+ IKQ+ H + V+D G+V
Sbjct: 89 SDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVH 148
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
S G Q G+LGLG+ + P+K++ FE + V M + +H+ ++ G ++ G
Sbjct: 149 SWGRNQNGQLGLGNTEDSLLPQKIHAFE----GVCVKMIAAGAEHTAAILEDGDLYGWGW 204
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
+ LGL +V P SS++ + ++ V CG H+V V SS ++YT+G G
Sbjct: 205 GQYGNLGLGDRNDRLV---PEKVSSVEGEK-MVLVACGWRHTVTVSSSGDLYTYGWSKYG 260
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
QLGH ++ K++A R FI + G +H+ A G +G GW
Sbjct: 261 QLGHGDF---EDHLVPHKLEALKDR-----FISQIAGGWRHTM-AVAGDGKLYGWGWN 309
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ + ++Y +G + LG G + VP L++LK I Q+ H++ V+ DG+
Sbjct: 243 VTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGK 302
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G+ SP ++ F D+ VA + H++ L + +VF G
Sbjct: 303 LYGWGWNKFGQVGVADNVDHCSPVQVIF---PDEQKVAQVACGWRHTLALTENKNVFSWG 359
Query: 143 LNSFHQLG 150
+ QLG
Sbjct: 360 RGTSGQLG 367
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 23/223 (10%)
Query: 2 TVMDNEEMRPIDHLIRDRKIDVSSN-QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK 60
T + EE D+ + R I + Q + V++WG N LG S++ + VP ++ + +
Sbjct: 62 TELPEEESEGYDYHMEKRYIRENIELQGSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFR 121
Query: 61 RASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLG----SESSVVS-PKKLNFEKDKD 115
+K + K H++F+S DG V SCG G+LG+G S S+ VS P K +K D
Sbjct: 122 NVLVKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSK---QKSLD 178
Query: 116 KLGVAMASISQ--------DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS 167
KL + S++ HS+ L +G +F G S+ +LG+ S + +P +
Sbjct: 179 KLQAIIQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIG---SDANAESPRFVA 235
Query: 168 SLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLGHSPV 208
SL++S+ ++ + CG H+ ++ +V+T+G GQLGH V
Sbjct: 236 SLQNSK-VVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKSV 277
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 26 NQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWS 85
N +++ WG+ + LG GS + P + SL+ + + + H+ ++ G VW+
Sbjct: 204 NDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWT 263
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G G G+LG S SP+ K G DH++ ++ SG ++ G N+
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPR---LNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANT 320
Query: 146 FHQLGLSPPPSHIVSPTPI 164
QLGL I+ PT +
Sbjct: 321 HGQLGLGDATDRII-PTLV 338
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 90/204 (44%), Gaps = 18/204 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG N G + P+ L SL SI V FHS +S G ++ G
Sbjct: 1716 VYAWGDGKWGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNS 1775
Query: 91 GGRLGLGSESSVV-SPKKLNFEKDKDKLGVAM-ASISQDHSVFLM--LSGSVFVCGLNSF 146
G+LGLG+ S+ SP K++ + GV M S+ +HS LM S ++F CGLN+
Sbjct: 1776 NGQLGLGTTSAAEDSPTKIS-----NLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNAN 1830
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
QLGL V + + + ++ CG H+ S ++ T+G GQLG
Sbjct: 1831 GQLGLGD----FVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLG 1886
Query: 205 HSPVTVSSASVIEPKVQATIIRED 228
+ + IE VQ I D
Sbjct: 1887 ---LKAGLSKDIENPVQLPAICND 1907
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y+ G + + LG G P + SL I +V +H + ++++ RV++ G G+
Sbjct: 1664 LYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGK 1723
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G G+ + + V+ P++L+ +GV HS L G +F+ G NS QLG
Sbjct: 1724 WGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGF---HSAALSQYGDLFMWGKNSNGQLG 1780
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY---SSREVYTFGIHA-GQLG 204
L + SPT I S+L ++ V G HS V +S ++T G++A GQLG
Sbjct: 1781 LGTTSAAEDSPTKI--SNLDGV--VMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLG 1834
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 17/215 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V++WG + LG Q P L+ SL SI + + S FV+D G ++ G +
Sbjct: 1612 VFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSE 1671
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLGLG + +P ++ + + + + + H + L V+ G + G
Sbjct: 1672 HGRLGLGHMAPAPTPVEI---RSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAG 1728
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPV 208
+S + ++ P + SSL + +IGV G FHS S +++ +G ++ GQLG
Sbjct: 1729 VS-NTNDVLEPQEL--SSLAACS-IIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLG-- 1782
Query: 209 TVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS 243
T S+A K+ +L G + + + G HS
Sbjct: 1783 TTSAAEDSPTKIS------NLDGVVMDVSLGANHS 1811
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLK-RASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V WG LG ++ P+++ +L RA K +C +HS + + G++ G
Sbjct: 1291 QVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILC-GGWHSAAILESGKILLWGK 1349
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG G S +P+ + + + K V A + +H++ +M++ VF G N Q
Sbjct: 1350 NVYGQLGHGDTKSCSAPRVNQYLRLEGK--VRTAGLGANHTLVVMVANKVFAMGSNIDGQ 1407
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLGHS 206
LGL PS P+ L + + + V G HS+ S EV+++G GQLGH
Sbjct: 1408 LGLD-DPSRTGKNVPVSIEEL-NGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHE 1465
Query: 207 PVT 209
+T
Sbjct: 1466 TIT 1468
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 15/184 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV-----PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWS 85
+Y +G LG G + TR P+ +++L + S+ + K + ++D G+V++
Sbjct: 517 IYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYT 576
Query: 86 CGHGQGGRLGLGSES--SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
G G+LGLGS ++V P+ + +D V S+ ++H+ FV G
Sbjct: 577 WGKSAQGKLGLGSGKPLAIVVPQLV---QDLSSHVVCQISLGRNHAACSTDMHKFFVWGS 633
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAG 201
N+F QLG+ S++ P P +SL+ + + + CG +H+++ ++ V + G G
Sbjct: 634 NTFGQLGIPHISSYM--PDPYEITSLREAN-IRSIACGGWHTLISTNTGSVMSCGKGWHG 690
Query: 202 QLGH 205
QLGH
Sbjct: 691 QLGH 694
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 94/240 (39%), Gaps = 24/240 (10%)
Query: 16 IRDR---KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDK 71
IRDR + +V +Y WG N LG G P+ + S I +V
Sbjct: 1163 IRDRANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGC 1222
Query: 72 FHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKD------KLGVAMASIS 125
HS+ S DG V++ G G G+LG V K+N+ + + + +
Sbjct: 1223 EHSLARSFDGGVYAWGAGDRGQLGSLENFDCV---KINYAFNPQPVLNLKRYFILSIACG 1279
Query: 126 QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS 185
+ H++ L V G F QLGL ++ TP +L P +C G +
Sbjct: 1280 RWHNMTLTSERQVLSWGAGEFGQLGLD---HNLSKGTPQMVKALDGRAPCKILCGGWHSA 1336
Query: 186 VVYSSREVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSF 244
+ S ++ +G + GQLGH SA P+V + L G + + G H+
Sbjct: 1337 AILESGKILLWGKNVYGQLGHGDTKSCSA----PRVNQYL---RLEGKVRTAGLGANHTL 1389
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 16/197 (8%)
Query: 19 RKIDVSSNQFNEVYIWGTNANYNLGTG--SQQTRDVPELLDSLKRASIKQVCMDKFHSVF 76
R S ++ ++WG+N LG S D P + SL+ A+I+ + +H++
Sbjct: 616 RNHAACSTDMHKFFVWGSNTFGQLGIPHISSYMPD-PYEITSLREANIRSIACGGWHTLI 674
Query: 77 VSDDGRVWSCGHGQGGRLGLGSESSVVSPKKL--NFEKDKDKLG---VAMASISQDHSVF 131
++ G V SCG G G+LG G S+ + K F+K + G + S ++ S
Sbjct: 675 STNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAA 734
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS-SLKSSQPLIGVCCGRFHSVVYSS 190
+ G +F G +QLG + PR + ++ V G H +
Sbjct: 735 ITNKGRLFTWGKGDEYQLGHESSKNE-----AYPREVEFFAKIRVVDVSIGDSHMLALDY 789
Query: 191 REV-YTFGI-HAGQLGH 205
+ Y++G AGQLGH
Sbjct: 790 SGLPYSWGNGSAGQLGH 806
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 29 NEVYIWGTNANYNLGTG--SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
N+V+ G+N + LG S+ ++VP ++ L +I QV HS+ +S G VWS
Sbjct: 1395 NKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSW 1454
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LG + + ++P L E+ K V + S + G VF G
Sbjct: 1455 GGSPFGQLGHETITDKLAPTPL-LERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGES 1513
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFH--SVVYSSR 191
+LG +P +++ P S +K ++ + CG H +V+ R
Sbjct: 1514 GELGHAPK---VLTYAP---SLIKDFSEVVQIACGFKHMAGIVFKPR 1554
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 20/150 (13%)
Query: 69 MDKFHSVFVSD------DGRVWSCGHGQGGRLGLG-----SESSVVSPKKLNFEKDKDKL 117
+D+F +V V D DG +++ G G GRLG G SE SV PK++ + K+
Sbjct: 497 LDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRI---ETLAKM 553
Query: 118 GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL-SPPPSHIVSPTPIPRSSLKSSQPLI 176
V + +D + L +G V+ G ++ +LGL S P IV P + SS +
Sbjct: 554 SVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQD---LSSHVVC 610
Query: 177 GVCCGRFHSVVYSS-REVYTFGIHA-GQLG 204
+ GR H+ + + + +G + GQLG
Sbjct: 611 QISLGRNHAACSTDMHKFFVWGSNTFGQLG 640
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+VY WG +A LG GS + VP+L+ L + Q+ + + H+ +D + + G
Sbjct: 573 KVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWG 632
Query: 88 HGQGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G+LG+ SS + P ++ ++ + +A H++ +GSV CG
Sbjct: 633 SNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGW---HTLISTNTGSVMSCGKGWH 689
Query: 147 HQLG 150
QLG
Sbjct: 690 GQLG 693
>gi|310824879|ref|YP_003957237.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|309397951|gb|ADO75410.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 775
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 30/223 (13%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG G+ + R+VP + L +S+ V ++HS+ V DG VW+ G +
Sbjct: 443 VWAWGRNYEGQLGDGTTRRREVPVPVPKL--SSVVAVAAGRYHSLAVRFDGTVWAWGDNE 500
Query: 91 GGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++G G+E+S +P ++ N GVA+A+ ++HS+ L G+V+ G N + QL
Sbjct: 501 YGQVGDGTETSRKAPVRVPNLGG-----GVAVAA-GENHSLVLRSDGTVWAWGGNHYGQL 554
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLG--- 204
G + I S +P+P ++ + V G+++S+ V S V+ +G++ GQLG
Sbjct: 555 G-----NGITSDSPVP-VQVQGLSGGVAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGT 608
Query: 205 --HSPVTV--------SSASVIEPKVQATIIREDLPGFIFESN 237
SPV V +V A ++R D + + SN
Sbjct: 609 ASDSPVPVRVQVPGLSGGVAVAAGTSHALVVRSDGTVWAWGSN 651
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 23/220 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG G VP + L V +++S+ V DG VW+ G
Sbjct: 543 VWAWGGNHYGQLGNGITSDSPVPVQVQGLSGG--VAVAAGQYYSLAVRSDGTVWAWGLNF 600
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ S SP + + GVA+A+ H++ + G+V+ G N Q+G
Sbjct: 601 EGQLGDGTASD--SPVPVRVQVPGLSGGVAVAA-GTSHALVVRSDGTVWAWGSNYDGQVG 657
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLGHS-- 206
P ++ P + + + V G HS+ V S V+ +G + AG LG
Sbjct: 658 EGAPRRRVLMPVQV-----QGLSEGMAVAAGYNHSLAVRSDGSVWAWGGNTAGVLGDGTT 712
Query: 207 -----PVTV----SSASVIEPKVQATIIREDLPGFIFESN 237
PV + +V + + ++R D G+ SN
Sbjct: 713 DRRTVPVQAQGLTGARAVAAGESHSLVLRSDGTGWAMGSN 752
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG+N LG G+ VP + L + V + HS+ V DG VW+ G
Sbjct: 191 VWAWGSNFEGQLGDGTTNVSLVPVRVKKLT--GVVAVAAGEKHSLAVRSDGTVWTWGFNG 248
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G LG G+ SS +K+ + GVA+A HS+ + G+V+ G N QLG
Sbjct: 249 YGALGDGTTSS----RKVPVQVQGLSGGVAVAG-GVYHSLAVRSDGTVWGWGANGVGQLG 303
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGV-CCGRFHSVVYSSR---EVYTFGIHA-GQLGH 205
P ++ P +Q L GV HS+ + R V+ +G ++ G LG+
Sbjct: 304 DGTPMRRVLVPV--------QAQGLSGVEAVAAGHSLSLAVRFDGTVWAWGGNSYGALGN 355
Query: 206 SPV-TVSSASVIEPKVQATI 224
+ T+S+ V P + +
Sbjct: 356 DTIETMSTVPVQVPGLSGGV 375
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 16/197 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG N+ LG + +T VP + L V H++ V DG VW+ G
Sbjct: 342 VWAWGGNSYGALGNDTIETMSTVPVQVPGLSGGVT--VVAASSHALAVRSDGTVWAWGGN 399
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G+ S ++L + GV + Q+HS+ + +V+ G N QL
Sbjct: 400 HYGQLGDGTTS-----ERLVAVPVQGLSGVMAVAARQEHSLAVRSDATVWAWGRNYEGQL 454
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHSP 207
G V P P+P+ S ++ V GR+HS+ V V+ +G + GQ+G
Sbjct: 455 GDGTTRRREV-PVPVPKLS-----SVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGT 508
Query: 208 VTVSSASVIEPKVQATI 224
T A V P + +
Sbjct: 509 ETSRKAPVRVPNLGGGV 525
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG+N + +G G+ + R + P + L V HS+ V DG VW+ G
Sbjct: 645 VWAWGSNYDGQVGEGAPRRRVLMPVQVQGLSEG--MAVAAGYNHSLAVRSDGSVWAWGGN 702
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G LG G+ P + + G + + HS+ L G+ + G N+ Q+
Sbjct: 703 TAGVLGDGTTDRRTVPVQA-----QGLTGARAVAAGESHSLVLRSDGTGWAMGSNASGQI 757
Query: 150 GLSPPPSHIVSPT 162
G P + +PT
Sbjct: 758 GDGGPTQQVSTPT 770
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 19/186 (10%)
Query: 33 IWGTNANYNLGTGSQQ----TRDVPELLDSLKRASIK-QVCMDKFHSVFVSDDGRVWSCG 87
+WG LG G Q + P +L A + ++ HS V DG VW+ G
Sbjct: 37 VWGVWLGLWLGVGCGQPPVDWEEQPSRASALGGARARARIATGANHSWAVRPDGTVWAVG 96
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LG G+ S P ++ + GV ++ HS+ L G+V+ G +
Sbjct: 97 ENVFGQLGDGTTSERRVPVQV-----QGLSGVVAVAVGAYHSLALRSDGTVWAVGRAACQ 151
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY-SSREVYTFGIH-AGQLGH 205
G S P P+P S + V G HS+ S V+ +G + GQLG
Sbjct: 152 --GGDGTASDCTVPAPVPGLSGG-----VAVAAGGLHSLALRSDGTVWAWGSNFEGQLGD 204
Query: 206 SPVTVS 211
VS
Sbjct: 205 GTTNVS 210
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 15/197 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG N LG G+ R VP L + ++ V S+ V DG VW+ G
Sbjct: 291 VWGWGANGVGQLGDGTPMRRVLVPVQAQGL--SGVEAVAAGHSLSLAVRFDGTVWAWGGN 348
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G LG ++ + + + GV + + S H++ + G+V+ G N + QL
Sbjct: 349 SYGALG---NDTIETMSTVPVQVPGLSGGVTVVAAS-SHALAVRSDGTVWAWGGNHYGQL 404
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLGHSP 207
G +V+ +P L ++ V + HS+ V S V+ +G + GQLG
Sbjct: 405 GDGTTSERLVA---VPVQGLSG---VMAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGT 458
Query: 208 VTVSSASVIEPKVQATI 224
V PK+ + +
Sbjct: 459 TRRREVPVPVPKLSSVV 475
>gi|402223195|gb|EJU03260.1| hypothetical protein DACRYDRAFT_115464 [Dacryopinax sp. DJM-731
SS1]
Length = 1437
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 103/238 (43%), Gaps = 39/238 (16%)
Query: 5 DNEEMRPIDHLIRDRKIDVSSNQFNE-----VYIWGTNANYNLGTGSQQTRDVPELLDSL 59
D+E+ P D + + +D + F +Y WG N N+ LG G R PE ++ L
Sbjct: 136 DHEDFTPWD--VYNLTVDGTYPDFEAPYGTMLYTWGVNRNFTLGLGDGDDRTYPEPIN-L 192
Query: 60 KRAS---------------IKQVCMDKFHSVFVSDDGR--VWSCGHGQGGRLGLGSESSV 102
R + + + M K H+ V+ + R V CG G GGRLG GS +
Sbjct: 193 ARLTPPSNATGSARFDTIGVSSIVMAKLHTGIVTSEARANVRLCGFGSGGRLGAGSHT-- 250
Query: 103 VSPKKLNFEKDKD-KLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL-------SPP 154
+ +F KD V ++ QDH++ L SG V+ GL F QLG
Sbjct: 251 ----QYSFAPLKDFAHTVTALALGQDHTLALTSSGEVYSWGLGRFAQLGYIIDKDDKGAA 306
Query: 155 PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSS 212
S V +P + + G+ + S ++ +YT+G +AGQLG+ TV +
Sbjct: 307 DSEQVQYSPKKVVGSLKGKEVRGIAACKTASAAWTREGLYTWGTNAGQLGYDRHTVPT 364
>gi|115374764|ref|ZP_01462040.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368241|gb|EAU67200.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 750
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 30/223 (13%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG G+ + R+VP + L +S+ V ++HS+ V DG VW+ G +
Sbjct: 418 VWAWGRNYEGQLGDGTTRRREVPVPVPKL--SSVVAVAAGRYHSLAVRFDGTVWAWGDNE 475
Query: 91 GGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++G G+E+S +P ++ N GVA+A+ ++HS+ L G+V+ G N + QL
Sbjct: 476 YGQVGDGTETSRKAPVRVPNLGG-----GVAVAA-GENHSLVLRSDGTVWAWGGNHYGQL 529
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLG--- 204
G + I S +P+P ++ + V G+++S+ V S V+ +G++ GQLG
Sbjct: 530 G-----NGITSDSPVP-VQVQGLSGGVAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGT 583
Query: 205 --HSPVTV--------SSASVIEPKVQATIIREDLPGFIFESN 237
SPV V +V A ++R D + + SN
Sbjct: 584 ASDSPVPVRVQVPGLSGGVAVAAGTSHALVVRSDGTVWAWGSN 626
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 23/220 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG G VP + L V +++S+ V DG VW+ G
Sbjct: 518 VWAWGGNHYGQLGNGITSDSPVPVQVQGLSGG--VAVAAGQYYSLAVRSDGTVWAWGLNF 575
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ S SP + + GVA+A+ H++ + G+V+ G N Q+G
Sbjct: 576 EGQLGDGTASD--SPVPVRVQVPGLSGGVAVAA-GTSHALVVRSDGTVWAWGSNYDGQVG 632
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLGHS-- 206
P ++ P + + + V G HS+ V S V+ +G + AG LG
Sbjct: 633 EGAPRRRVLMPVQV-----QGLSEGMAVAAGYNHSLAVRSDGSVWAWGGNTAGVLGDGTT 687
Query: 207 -----PVTV----SSASVIEPKVQATIIREDLPGFIFESN 237
PV + +V + + ++R D G+ SN
Sbjct: 688 DRRTVPVQAQGLTGARAVAAGESHSLVLRSDGTGWAMGSN 727
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG+N LG G+ VP + L + V + HS+ V DG VW+ G
Sbjct: 166 VWAWGSNFEGQLGDGTTNVSLVPVRVKKLT--GVVAVAAGEKHSLAVRSDGTVWTWGFNG 223
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G LG G+ SS +K+ + GVA+A HS+ + G+V+ G N QLG
Sbjct: 224 YGALGDGTTSS----RKVPVQVQGLSGGVAVAG-GVYHSLAVRSDGTVWGWGANGVGQLG 278
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGV-CCGRFHSVVYSSR---EVYTFGIHA-GQLGH 205
P ++ P +Q L GV HS+ + R V+ +G ++ G LG+
Sbjct: 279 DGTPMRRVLVPV--------QAQGLSGVEAVAAGHSLSLAVRFDGTVWAWGGNSYGALGN 330
Query: 206 SPV-TVSSASVIEPKVQATI 224
+ T+S+ V P + +
Sbjct: 331 DTIETMSTVPVQVPGLSGGV 350
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 16/197 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG N+ LG + +T VP + L V H++ V DG VW+ G
Sbjct: 317 VWAWGGNSYGALGNDTIETMSTVPVQVPGLSGGVT--VVAASSHALAVRSDGTVWAWGGN 374
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G+ S ++L + GV + Q+HS+ + +V+ G N QL
Sbjct: 375 HYGQLGDGTTS-----ERLVAVPVQGLSGVMAVAARQEHSLAVRSDATVWAWGRNYEGQL 429
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHSP 207
G V P P+P+ S ++ V GR+HS+ V V+ +G + GQ+G
Sbjct: 430 GDGTTRRREV-PVPVPKLS-----SVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGT 483
Query: 208 VTVSSASVIEPKVQATI 224
T A V P + +
Sbjct: 484 ETSRKAPVRVPNLGGGV 500
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG+N + +G G+ + R + P + L V HS+ V DG VW+ G
Sbjct: 620 VWAWGSNYDGQVGEGAPRRRVLMPVQVQGLSEG--MAVAAGYNHSLAVRSDGSVWAWGGN 677
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G LG G+ P + + G + + HS+ L G+ + G N+ Q+
Sbjct: 678 TAGVLGDGTTDRRTVPVQA-----QGLTGARAVAAGESHSLVLRSDGTGWAMGSNASGQI 732
Query: 150 GLSPPPSHIVSPT 162
G P + +PT
Sbjct: 733 GDGGPTQQVSTPT 745
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 19/186 (10%)
Query: 33 IWGTNANYNLGTGSQQ----TRDVPELLDSLKRASIK-QVCMDKFHSVFVSDDGRVWSCG 87
+WG LG G Q + P +L A + ++ HS V DG VW+ G
Sbjct: 12 VWGVWLGLWLGVGCGQPPVDWEEQPSRASALGGARARARIATGANHSWAVRPDGTVWAVG 71
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LG G+ S P ++ + GV ++ HS+ L G+V+ G +
Sbjct: 72 ENVFGQLGDGTTSERRVPVQV-----QGLSGVVAVAVGAYHSLALRSDGTVWAVGRAACQ 126
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY-SSREVYTFGIH-AGQLGH 205
G S P P+P S + V G HS+ S V+ +G + GQLG
Sbjct: 127 --GGDGTASDCTVPAPVPGLSGG-----VAVAAGGLHSLALRSDGTVWAWGSNFEGQLGD 179
Query: 206 SPVTVS 211
VS
Sbjct: 180 GTTNVS 185
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 15/197 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG N LG G+ R VP L + ++ V S+ V DG VW+ G
Sbjct: 266 VWGWGANGVGQLGDGTPMRRVLVPVQAQGL--SGVEAVAAGHSLSLAVRFDGTVWAWGGN 323
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G LG ++ + + + GV + + S H++ + G+V+ G N + QL
Sbjct: 324 SYGALG---NDTIETMSTVPVQVPGLSGGVTVVAAS-SHALAVRSDGTVWAWGGNHYGQL 379
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLGHSP 207
G +V+ +P L ++ V + HS+ V S V+ +G + GQLG
Sbjct: 380 GDGTTSERLVA---VPVQGLSG---VMAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGT 433
Query: 208 VTVSSASVIEPKVQATI 224
V PK+ + +
Sbjct: 434 TRRREVPVPVPKLSSVV 450
>gi|443924762|gb|ELU43730.1| BTB domain-containing and ankyrin repeat protein [Rhizoctonia
solani AG-1 IA]
Length = 1374
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 56/266 (21%)
Query: 3 VMDNEEMRPID---HLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL 59
+ D E M P D + + S + E+++WG+N N LG GS R PE +
Sbjct: 138 IRDLEGMTPFDVYNATVEGTVPESSPSVPRELWVWGSNRNATLGIGSADDRGYPEAIHPP 197
Query: 60 KRAS---------------IKQVCMDKFHSVFVSDDGR--VWSCGHGQGGRLGLGSESSV 102
K A + + M + H+ ++D+ R + +CG G GRLG +
Sbjct: 198 KPAELLAKLSGSARFKLIGVNDIVMSRLHTSILTDEARANLEACGFGGVGRLGTKQHTQY 257
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
K E + ++ DH++ L G V G+N FHQLG +++ T
Sbjct: 258 SFGKVAGLENQT----IIRVALGLDHTLALTSGGDVLSWGMNRFHQLG------YVIEQT 307
Query: 163 -----PIP--RSSLKSSQ------------PL-----IGVCCGRFHSVVYSSREVYTFGI 198
PIP ++++ SS+ PL +G+ + SV +++ ++Y++G
Sbjct: 308 DSPGKPIPKGKANIDSSENQVQVSPKRVVGPLRKEIVVGIAACKTASVCWTNEDLYSWGT 367
Query: 199 HAGQLGHSPVTVSSASVIEPKVQATI 224
++GQLG++ V ++ P+ AT+
Sbjct: 368 NSGQLGYAKVAPGWQAI--PRKVATV 391
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 100/185 (54%), Gaps = 14/185 (7%)
Query: 30 EVYIWGTNANYNLGTG--SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E++ WG N + LG G + + + P ++SLK+ I + + H+V + ++S G
Sbjct: 1214 ELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWG 1273
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSVFVCGLNS 145
+G+ G+LG G + PK++ ++ G ++SI+ H++ L G +F G N
Sbjct: 1274 NGKYGQLGHGVSTPHNLPKRI-----EEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNE 1328
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSL-KSSQP--LIGVCCGRFHSVVYSSR-EVYTFGIHA- 200
QLGL+ H+ PT + + + + QP + G+ CG HSV+ +S +VY+FG +A
Sbjct: 1329 HGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAK 1388
Query: 201 GQLGH 205
GQLGH
Sbjct: 1389 GQLGH 1393
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 19/189 (10%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY +G NA LG GS ++ P+L+ LK +IK++ +H+V +D V+ G G
Sbjct: 1379 DVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWGQG 1438
Query: 90 QGGRLGLGSESSVVSPK--KLNFEKDKDKLGVAM---ASISQ---DHSVFLMLSGSVFVC 141
+ LG GS + + PK +L K +++ + A+++Q D + G+V++C
Sbjct: 1439 EHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNT----GGNVYIC 1494
Query: 142 GLNSFHQLGLS----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
G + +LG+ P P IP S+ S+ + F++++ S+ +Y +G
Sbjct: 1495 GSSEHGKLGIGGDPRSPSLDKAYPAIIP--SINSANVVDLASGAEFNALITSNGALYMWG 1552
Query: 198 IHA-GQLGH 205
GQ+G+
Sbjct: 1553 AGTHGQIGN 1561
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD-- 80
V + + VY WG + LGTGS + VP+L++ +++V +H+ ++
Sbjct: 1424 VVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMG 1483
Query: 81 -----GRVWSCGHGQGGRLGLGSE 99
G V+ CG + G+LG+G +
Sbjct: 1484 DSNTGGNVYICGSSEHGKLGIGGD 1507
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 93/189 (49%), Gaps = 15/189 (7%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N+ +V+ WG LG G+ ++ VP L+ L I QV H + +S DG
Sbjct: 97 LAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDG 156
Query: 82 RVWSCGHGQGGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
+++ G G+LGLG E S +SP+ L K G+ + IS DHS L SG+V
Sbjct: 157 QLFVWGENSSGQLGLGKGEPSTLSPQPL-----KSLCGIPLTQISAGGDHSFALSFSGAV 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G NS QLGL+ V P I SQ ++ + CG H+ + ++TFG
Sbjct: 212 FGWGKNSAGQLGLNDEQDRAV-PCHI---KFLRSQKVVYISCGEEHTAALTKEGGLFTFG 267
Query: 198 IHA-GQLGH 205
+ GQLGH
Sbjct: 268 NGSKGQLGH 276
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 87/176 (49%), Gaps = 9/176 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY G+N+ LG +R PEL+ +L I V + HS+ V++ G+V++ G G
Sbjct: 55 VYTCGSNSCGQLGHDKGGSR--PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGD 112
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GG+LGLG+ V +L + + ++ M H + L G +FV G NS QLG
Sbjct: 113 GGQLGLGTAEEAVRVPRLIKKLCEHRISQVMC--GNHHCIALSKDGQLFVWGENSSGQLG 170
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLG 204
L +SP P+ SL PL + G HS S S V+ +G + AGQLG
Sbjct: 171 LGKGEPSTLSPQPL--KSL-CGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLG 223
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 28/199 (14%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++++WG N++ LG G + + P+ L SL + Q+ HS +S G V+ G
Sbjct: 157 QLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGK 216
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL E P + F + + V S ++H+ L G +F G S Q
Sbjct: 217 NSAGQLGLNDEQDRAVPCHIKFLRSQK---VVYISCGEEHTAALTKEGGLFTFGNGSKGQ 273
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIG-----VCCGRFHSVVY--SSREVYTFGIHA- 200
LG + P+PR ++ L+G + CGR H++ + S+ +Y FG +
Sbjct: 274 LGHDSTRNE-----PLPRRVME----LMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQ 324
Query: 201 GQLG-------HSPVTVSS 212
GQLG SPV VS+
Sbjct: 325 GQLGTGIRGSAKSPVPVSN 343
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Query: 87 GHGQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G G+LG+G SE+SV P+ D G+ + HS+FL+ GSV+ CG NS
Sbjct: 6 GSSGAGQLGIGASEASVFEPRSCCV---FDGRGLKEVACGNQHSLFLLHDGSVYTCGSNS 62
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQL 203
QLG S P +L +Q + GV CG+ HS+ + + +V+ +G GQL
Sbjct: 63 CGQLGHDKGGSR-----PELVGAL-DAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQL 116
Query: 204 G 204
G
Sbjct: 117 G 117
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 22/175 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N+ LG +Q R VP + L+ + + + H+ ++ +G +++ G+G
Sbjct: 211 VFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSV-FLMLSGSVFVCGLNSFH 147
G+LG S + P+++ + +G ++ I+ ++H++ F+ +G ++ G N+
Sbjct: 271 KGQLGHDSTRNEPLPRRV-----MELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQG 325
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG-IHAG 201
QLG S + +P+P S++ QPL C G Y+ E T IH+G
Sbjct: 326 QLGTGIRGS---AKSPVPVSNI---QPL---CIGN----AYTRTEHCTIAKIHSG 367
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 17/177 (9%)
Query: 34 WGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGG 92
WG++ LG G+ + P +K+V HS+F+ DG V++CG G
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCG 64
Query: 93 RLGL---GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+LG GS +V D ++ S Q HS+ + G VF G QL
Sbjct: 65 QLGHDKGGSRPELVGA--------LDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQL 116
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
GL + P I + + V CG H + S +++ +G + +GQLG
Sbjct: 117 GLGTAEEAVRVPRLIKK---LCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLG 170
>gi|367010342|ref|XP_003679672.1| hypothetical protein TDEL_0B03320 [Torulaspora delbrueckii]
gi|359747330|emb|CCE90461.1| hypothetical protein TDEL_0B03320 [Torulaspora delbrueckii]
Length = 1383
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 19/187 (10%)
Query: 34 WGTNANYNLGTGSQQTR--------DVPELLDSLKRAS--IKQVCMDKFHSVFVSDDGRV 83
WG+N NY LGTG++ R D D+L+ + K++ + ++HS+ V+ + +V
Sbjct: 169 WGSNVNYQLGTGNKDDRQNMFQLAIDQLNKTDTLELTASRFKKILITRYHSIIVTTENKV 228
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
++CG+ GRLG G + V PK KD + M S H++ L V+ G
Sbjct: 229 YTCGNSSRGRLGNGV-ADVPQPKFAEILDLKD-TEIMMFKTSNHHTLLLTDKSDVYSWGW 286
Query: 144 NSFHQLGLSPPPSH-----IVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
N + QLG S + + P S L+ + ++ + C + HS S+ +++ +G
Sbjct: 287 NGYGQLGYSTNSKNTDLDKVFGSVPKKISFLEGEE-VVNISCSKIHSCAVSANGKLFMWG 345
Query: 198 IHAGQLG 204
++ GQLG
Sbjct: 346 LNVGQLG 352
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 32/182 (17%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVP-----ELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
N+VY G ++ LG G DVP E+LD LK I H++ ++D V
Sbjct: 226 NKVYTCGNSSRGRLGNG---VADVPQPKFAEILD-LKDTEIMMFKTSNHHTLLLTDKSDV 281
Query: 84 WSCGHGQGGRLGLGSESSVVS--------PKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
+S G G+LG + S PKK++F + ++ + ++ + I HS + +
Sbjct: 282 YSWGWNGYGQLGYSTNSKNTDLDKVFGSVPKKISFLEGEEVVNISCSKI---HSCAVSAN 338
Query: 136 GSVFVCGLNSFHQLGLSP---PPSHI-------VSPTPIPRSSLKSSQPLIGVCCGRFHS 185
G +F+ GLN G P P I V+ TP+ + S P+ V C F +
Sbjct: 339 GKLFMWGLNVGQLGGFKPVHKTPDSIYQNQDAYVTNTPVITNIANS--PVEQVVCTDFAT 396
Query: 186 VV 187
V
Sbjct: 397 FV 398
>gi|50294315|ref|XP_449569.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528883|emb|CAG62545.1| unnamed protein product [Candida glabrata]
Length = 1351
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 23/190 (12%)
Query: 34 WGTNANYNLGTGSQQTR------DVPELLDSL----KRASIKQVCMDKFHSVFVSDDGRV 83
+G+N N LGTG++ R D +L L K+ SIK+V M ++H + ++ G V
Sbjct: 182 FGSNVNAQLGTGNKDDRQHFHETDYQQLGGDLPLDPKKFSIKEVLMSRYHCLVINSFGEV 241
Query: 84 WSCGHGQGGRLGLGSESSVVS--PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
++CG+ GRLG G ++ VS K FE GV SIS H++ + +G ++
Sbjct: 242 FTCGNSNRGRLGNGETNTTVSVFTKIATFET-----GVRHVSISNHHNLLVDGNGYIYSW 296
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLK-----SSQPLIGVCCGRFHSVVYS-SREVYT 195
G N ++QLG + S + +SS K + + V C + HS S ++Y
Sbjct: 297 GWNQYYQLGYTSSNKQGDSKHTLCKSSPKRIPYFDNINIKYVACSKVHSCALSQDNKLYL 356
Query: 196 FGIHAGQLGH 205
+G++ GQ+G+
Sbjct: 357 WGLNLGQMGN 366
>gi|19075211|ref|NP_587711.1| BTB/POZ domain protein Btb1 [Schizosaccharomyces pombe 972h-]
gi|74654760|sp|O74881.1|BTB1_SCHPO RecName: Full=BTB/POZ domain-containing protein 1
gi|3646452|emb|CAA20916.1| BTB/POZ domain protein Btb1 [Schizosaccharomyces pombe]
Length = 1347
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 26/197 (13%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLK-------------RASIKQVCMDKFHSV 75
NE+Y +GTN N LG + + PE + LK R I V KFHSV
Sbjct: 149 NELYGFGTNVNNTLGIANGKEPSSPERVFLLKNQTESPTSGQLFSRDKILDVQASKFHSV 208
Query: 76 FVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL-GVAMASISQDHSVFL 132
++D+ V+ CG G GGR+G ++ + NF + V S+S HS+ L
Sbjct: 209 VLTDEPSQNVYVCGIGAGGRIGFNTDV------QYNFIPIPGIIHKVIQISVSHTHSLAL 262
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI-PR--SSLKSSQPLIGVCCGRFHSVVYS 189
GS++ G N +LGLS P I PR S+ K Q +IG+ G+ +SV ++
Sbjct: 263 TKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISAFKDYQ-IIGMAAGKSYSVAWT 321
Query: 190 SREVYTFGIHAGQLGHS 206
++Y++G++ GQLG S
Sbjct: 322 DTDIYSWGLNNGQLGIS 338
>gi|453089581|gb|EMF17621.1| hypothetical protein SEPMUDRAFT_146593 [Mycosphaerella populorum
SO2202]
Length = 1563
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 17/152 (11%)
Query: 64 IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESS-----VVSPKKLNFEKDKDK 116
I+ V M K HS ++ D ++ CGHGQGGRLG G E + + L+ ++
Sbjct: 312 IQDVFMSKLHSAVLTTDPVSNLYMCGHGQGGRLGTGDERTRFQYVCIEAGGLSGKR---- 367
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS-PPPSHIVSP-TPIPRSSLK--SS 172
+A ++ Q+H++ L +G +F G N + QLG S P S P + +PR
Sbjct: 368 --IATVALGQNHTLALDEAGEIFSWGNNGYGQLGYSLPKTSGDEDPISTVPRQIFGPLKR 425
Query: 173 QPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ + G+ RFHSV ++S ++TFG + GQLG
Sbjct: 426 EAVQGIAASRFHSVTHTSTSLFTFGKNEGQLG 457
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 19 RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDKFHSVFV 77
R V+ N+ +V++WG LG + +T +P LL L SI QV H + +
Sbjct: 92 RAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIAL 151
Query: 78 SDDGRVWSCGHGQGGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLML 134
S DG++++ G G+LGLG E+S +SP + K G+ +A I+ DH L L
Sbjct: 152 SRDGQLFTWGQNSSGQLGLGKGETSKLSPSPV-----KSLAGIPLAQITAGGDHCFALSL 206
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREV 193
SG+VF G N QLGL+ V P I SQ ++ + CG H+ + S +
Sbjct: 207 SGAVFGWGKNKAGQLGLNDKQDRAV-PCHI---KFLRSQRVVYISCGDEHTAALTKSGGL 262
Query: 194 YTFGIHA-GQLGH 205
+TFG + GQLGH
Sbjct: 263 FTFGDGSRGQLGH 275
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
Q VY G+N+ LG + + PEL+ +L I V + HSV V++ G+V+
Sbjct: 50 QDGSVYTCGSNSCGQLG--HDKAGNSPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVW 107
Query: 87 GHGQGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G G GG+LGL +E++V P+ L D ++ H + L G +F G NS
Sbjct: 108 GAGDGGQLGLETAETAVRIPRLLKKLCDH---SISQVVCGNQHCIALSRDGQLFTWGQNS 164
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQL 203
QLGL + +SP+P+ SL + PL + G H S S V+ +G + AGQL
Sbjct: 165 SGQLGLGKGETSKLSPSPV--KSL-AGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQL 221
Query: 204 G 204
G
Sbjct: 222 G 222
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 34 WGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGG 92
WG + LG G + P + +K+V H++F+ DG V++CG G
Sbjct: 4 WGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCG 63
Query: 93 RLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS 152
+ LG + + SP+ + D + M S + HSV + G VFV G QLGL
Sbjct: 64 Q--LGHDKAGNSPELVG---ALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLE 118
Query: 153 PPPSHIVSPTPIPRSSLKSSQPLIG-VCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
+ + IPR K I V CG H + S +++T+G + +GQLG
Sbjct: 119 TAETAV----RIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLG 169
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 26/182 (14%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG +Q R VP + L+ + + H+ ++ G +++ G G
Sbjct: 210 VFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGS 269
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSV-FLMLSGSVFVCGLNSFH 147
G+LG GS ++ + P+++ + +G ++ I+ + H++ F+ SG+V+ G NS
Sbjct: 270 RGQLGHGSSNNELLPRRV-----MELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHG 324
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSS----------------QPLIGVCCGRFHS-VVYSS 190
QLG + + + SP P+ L + +I + CG HS ++YSS
Sbjct: 325 QLG-TGILADLRSPHPVKNDFLTLNLRKGKVYLRIDTGFLKYTVIKIICGGDHSFLMYSS 383
Query: 191 RE 192
+
Sbjct: 384 EQ 385
>gi|449303727|gb|EMC99734.1| hypothetical protein BAUCODRAFT_30128 [Baudoinia compniacensis UAMH
10762]
Length = 1571
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 101/252 (40%), Gaps = 65/252 (25%)
Query: 13 DHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPE------------------ 54
D + R +I V S ++V+ +G+N N +LG G Q R PE
Sbjct: 213 DDVYRTSQIFVHSVNGDQVFTFGSNQNVSLGFGDQDDRHFPERITLRRPEHLVRRFHSEH 272
Query: 55 -------------------------LLDSL------KRASIKQVCMDKFHSVFVSDD--G 81
LD L K I++V M K S ++DD
Sbjct: 273 VAETAKKWSAHDPSFVTSPVAPASGWLDDLPFVVRSKPIIIREVQMAKLSSAVLTDDPEA 332
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLG---VAMASISQDHSVFLMLSGS 137
++ CGHGQ GRLG G E + + NF + L V ++ Q H++ L G
Sbjct: 333 NLYMCGHGQSGRLGTGDEQT-----RFNFVCVEGGSLAGKRVVSVALGQGHTLALSEEGE 387
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTP---IPRS--SLKSSQPLIGVCCGRFHSVVYSSRE 192
F G N F QLG + P + P PR + + + G+ R HSV Y+
Sbjct: 388 TFSWGNNGFGQLGYTLPKAAADDKDPCSTFPRQIYGVLKRETVTGIAASRVHSVAYTPSS 447
Query: 193 VYTFGIHAGQLG 204
++TFG + GQLG
Sbjct: 448 LFTFGKNEGQLG 459
>gi|213408773|ref|XP_002175157.1| BTB/POZ domain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212003204|gb|EEB08864.1| BTB/POZ domain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 1316
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 115/229 (50%), Gaps = 34/229 (14%)
Query: 1 MTVMDNEEMRPIDHL------IRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPE 54
+ + D E + P D L IR + +++ NEVY +G+N+N LG R PE
Sbjct: 114 LRIKDKEGLSPFDLLDYTLPVIRPSQGELA----NEVYSFGSNSNCLLGFPDSDDRSHPE 169
Query: 55 LL----------DSLKRAS---IKQVCMDKFHSVFVSDDGR--VWSCGHGQGGRLGLGSE 99
+ DS +R + + V + +FH+V ++D+ + V+ CG G GGRLG ++
Sbjct: 170 KIHLCKDFKVYTDSAERFANVHVLDVQLSRFHTVILTDEEKNNVYICGIGTGGRLGFATD 229
Query: 100 SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSH-- 157
+P ++ F D+ + V ++ H++ L SG+++ G + LG S S
Sbjct: 230 VQF-TPMQV-FVHDRKIVKVC---VTNYHTIVLTDSGALYSWGNSINGVLGYSMSSSQRD 284
Query: 158 -IVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
V +P +LK +IG+C H + Y++ +VYT+G++ GQLGH
Sbjct: 285 EAVQLSPRRIIALKEMN-VIGICACDTHCIAYTNTDVYTWGLNNGQLGH 332
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG T ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLTTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ + G V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL+ + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ +G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|195050735|ref|XP_001992956.1| GH13561 [Drosophila grimshawi]
gi|193900015|gb|EDV98881.1| GH13561 [Drosophila grimshawi]
Length = 2746
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 45/57 (78%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKV 277
Q TI+++D+ GFIFESNRGTKHS TAETSLG +F GW+ +K KR++SK + K +V
Sbjct: 832 QVTILQDDMQGFIFESNRGTKHSLTAETSLGADFASGWSTEKKKRIKSKTDVQKVQV 888
>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
Length = 628
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N+VY WG N LGTG Q R P + V HS+ +S+ G ++S G
Sbjct: 151 NQVYAWGCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNYGELYSWGC 210
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G GGR G GSE+ +SP+ ++ K +A + HS L GSV+ G N + Q
Sbjct: 211 GTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGML---HSAATDLRGSVYTWGWNKYGQ 267
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
LG + H+ SP + R K ++ V CG+ H+ + ++ +Y+FG + GQLG
Sbjct: 268 LGNNTAKKHL-SPNKL-RDMEK--HHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLG 321
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 21/185 (11%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
+ E+Y WG G GS+ P+++ +L I + HS G V++
Sbjct: 201 NYGELYSWGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTW 260
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G + G+LG + +SP KL +D +K V + ++H+ L G ++ G N
Sbjct: 261 GWNKYGQLGNNTAKKHLSPNKL---RDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVC 317
Query: 147 HQLGL-----SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA 200
QLG+ S P + P + + + G +H++ +++ VY++G +
Sbjct: 318 GQLGVGGYADSQQPKKVDLP-----------EHAVDIVSGYYHTLCLTNKGNVYSWGYMS 366
Query: 201 -GQLG 204
G LG
Sbjct: 367 DGALG 371
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG N LG + + P L +++ + +V K H+ ++ +G ++S G
Sbjct: 257 VYTWGWNKYGQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNV 316
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG+G + PKK+ D + V + S H++ L G+V+ G S LG
Sbjct: 317 CGQLGVGGYADSQQPKKV----DLPEHAVDIVS-GYYHTLCLTNKGNVYSWGYMSDGALG 371
Query: 151 LSPPPSHIVSPTPIPRSSLK 170
L H P IP S ++
Sbjct: 372 LGDIAGHQSKPKLIPLSHIR 391
>gi|392595132|gb|EIW84456.1| hypothetical protein CONPUDRAFT_100586 [Coniophora puteana
RWD-64-598 SS2]
Length = 1510
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 16 IRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS------------ 63
+R D + + +E+ WGTN N LG G R PE + R +
Sbjct: 147 LRITNPDGMNEELSELLTWGTNRNATLGVGDGSDRTYPEQVTIPYRENETQRQNMQVERR 206
Query: 64 -----IKQVCMDKFHSVFVSDDGR--VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
++++ M + H+V V+ + R V CG G GGRLG + F
Sbjct: 207 FSPIHVREISMSRLHTVVVTSEARDNVRLCGFGSGGRLGSSQHTQYGLMALPEFSHT--- 263
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVS--PTPIPRSSLKSSQP 174
+ ++ QDH++ L +G V GLN F QLG + V P+ S K P
Sbjct: 264 --IVSVALGQDHTLALTSTGEVLSWGLNRFAQLGYVVESATGVGRLDEPVQASPRKIVGP 321
Query: 175 L-----IGVCCGRFHSVVYSSREVYTFGIHAGQLGHS 206
L +GV + S ++S E++T+G + GQLG++
Sbjct: 322 LRREVVVGVAACKTGSACWTSTELFTWGTNGGQLGYA 358
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 30 EVYIWGTNANYNLGTG-SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E+Y WG+NA LG G + + P L+ SL I + HS VS G ++ G
Sbjct: 473 ELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGK 532
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +S P +L + LGV S D SVFL G VF CG +F Q
Sbjct: 533 NTFGQLGLNDLNSRQFPTQL---RTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQ 589
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY--SSREVYTFGIH-AGQLG 204
LG + I+ K +Q + CGR H++ + S ++Y FG+ GQLG
Sbjct: 590 LGHGSCNNEILPRMVFELMGSKITQ----IACGRRHTLAFVPSRGKIYGFGLSGVGQLG 644
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 15/240 (6%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ + +VY WG+NA LG + TR +P L+ S+ + Q+ +H + +++ G
Sbjct: 413 LALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSG 472
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
+++ G G+LGLG + VS L + + +A + +HS + SG++F
Sbjct: 473 ELYAWGSNAYGQLGLGMTNEKVSTPTL--VQSLAGVPIAFIACGGNHSFAVSKSGAIFGW 530
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHA- 200
G N+F QLGL+ S P +L+S C F + + V+T G
Sbjct: 531 GKNTFGQLGLNDLNSR---QFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTF 587
Query: 201 GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTG 260
GQLGH S + I P+ ++ E + I + G +H+ S G +G G +G
Sbjct: 588 GQLGHG----SCNNEILPR----MVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSG 639
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 52 VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
VP +D + I + H++ +++DG+++SCG+ G+LG ES + K+
Sbjct: 337 VPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVES--LPNKRPQLL 394
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
+ + A HS+ L G V+ G N+ QLG + + P I S+ +
Sbjct: 395 TALENYIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLI--RSIAA 452
Query: 172 SQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDL 229
Q ++ + G +H + + S E+Y +G +A GQLG + KV + + L
Sbjct: 453 KQ-VVQIAAGHYHCLALTNSGELYAWGSNAYGQLG--------LGMTNEKVSTPTLVQSL 503
Query: 230 PGF-IFESNRGTKHSFTAETSLGPEFGGG 257
G I G HSF S G FG G
Sbjct: 504 AGVPIAFIACGGNHSFAVSKS-GAIFGWG 531
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
++ WG N LG +R P L +L+ ++ V C D F SVF++ G V++CG G
Sbjct: 527 IFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDF-SVFLTAGGGVFTCGAG 585
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV-FLMLSGSVFVCGLNSFHQ 148
G+LG GS ++ + P+ + FE K + + + H++ F+ G ++ GL+ Q
Sbjct: 586 TFGQLGHGSCNNEILPRMV-FELMGSK--ITQIACGRRHTLAFVPSRGKIYGFGLSGVGQ 642
Query: 149 LGL 151
LG+
Sbjct: 643 LGI 645
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 8/206 (3%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCM 69
P+D + ++ ++ +V+ WG ++ LGTG ++ +P+ + +L I Q+
Sbjct: 82 PVDLVSCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISC 141
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDH 128
+HS+ +S DG+V+S G G+LGLG E S SP+++ + + + +A + H
Sbjct: 142 GYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRV---RSLEGIPLAQVAAGGAH 198
Query: 129 SVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY 188
S L LSG+ F G NS QL S + S P +LK + ++ + CG H+ V
Sbjct: 199 SFALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALK-NLGVVYISCGYEHTAVL 257
Query: 189 SSR-EVYTFGIHA-GQLGHSPVTVSS 212
+ +V+TFG ++ GQLGH+ V+ ++
Sbjct: 258 TQNDQVFTFGDNSFGQLGHNGVSQTT 283
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 112/269 (41%), Gaps = 30/269 (11%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V+ WG N++ LG G + ++ P+ + SL+ + QV HS +S G + G+
Sbjct: 154 QVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGN 213
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+L + +V K LGV S +H+ L + VF G NSF Q
Sbjct: 214 NSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQ 273
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV--VYSSREVYTFG---IHAGQL 203
LG + VS T P+ P+ + CG +H++ VY++ +V +FG H
Sbjct: 274 LG-----HNGVSQTTGPQLVEGIGGPVSQIDCGSYHTLAYVYTTGQVVSFGREPSHTSNP 328
Query: 204 GHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRG---TKHSFTAETSLG----PE--- 253
H P T S S I + A +R+ IF T H T T + PE
Sbjct: 329 TH-PETPSENSDISCLISADDLRDIQIKHIFAGTYADFVTTHQGTCSTGISRKNLPEISR 387
Query: 254 ----FGGGWTGKKGKRLRSKLEAVKQKVR 278
WT + R+K EA ++R
Sbjct: 388 IHESLAKRWTTIE----RAKREAANSEIR 412
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ G N+ LG + PE + +L + V K HS+ V G+V++ G G
Sbjct: 50 VHACGDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEHSLAVCHKGKVFAWGVGS 109
Query: 91 GGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFH 147
G+LG G E P+K+ K G+ + IS HS+ L G VF G NS
Sbjct: 110 DGQLGTGKFEEICFIPQKI-----KALTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHG 164
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLGH 205
QLGL SP + SL+ PL V G HS S S + +G + AGQL
Sbjct: 165 QLGLGQEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAF 221
Query: 206 S 206
S
Sbjct: 222 S 222
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 16/187 (8%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H++ + + V +CG GG+LG S P+ + + L V + S ++HS+ +
Sbjct: 40 HALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPI---QALVNLPVDLVSCGKEHSLAV 96
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
G VF G+ S QLG P I + +I + CG +HS+ S
Sbjct: 97 CHKGKVFAWGVGSDGQLGTGKFEEICFIPQKI---KALTGIKIIQISCGYYHSLALSKDG 153
Query: 192 EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSL 250
+V+++G ++ GQLG S AS P+ ++ E +P + + G HSF S
Sbjct: 154 QVFSWGKNSHGQLGLGQEFPSQAS---PQRVRSL--EGIP--LAQVAAGGAHSFALSLS- 205
Query: 251 GPEFGGG 257
G FG G
Sbjct: 206 GTSFGWG 212
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 21/188 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGHSPV 208
GQLGH V
Sbjct: 272 GQLGHDSV 279
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGVNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQTSPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + SIK+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
Q ++ V CG +H + ++ + +T+G ++ GQLG
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG 170
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLM-LSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ + H++ L+ SG ++ G +
Sbjct: 271 CGQLGHDSVNDEVNPRRV-----LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 21/188 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGHSPV 208
GQLGH V
Sbjct: 272 GQLGHDSV 279
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGVNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQTSPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + SIK+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
Q ++ V CG +H + ++ + +T+G ++ GQLG
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG 170
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLM-LSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ + H++ L+ SG ++ G +
Sbjct: 271 CGQLGHDSVNDEVNPRRV-----LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 21/188 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGHSPV 208
GQLGH V
Sbjct: 272 GQLGHDSV 279
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGVNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQTSPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + SIK+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
Q ++ V CG +H + ++ + +T+G ++ GQLG
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG 170
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLM-LSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ + H++ L+ SG ++ G +
Sbjct: 271 CGQLGHDSVNDEVNPRRV-----LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 21/188 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGHSPV 208
GQLGH V
Sbjct: 272 GQLGHDSV 279
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGVNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQTSPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + SIK+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
Q ++ V CG +H + ++ + +T+G ++ GQLG
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG 170
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLM-LSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ + H++ L+ SG ++ G +
Sbjct: 271 CGQLGHDSVNDEVNPRRV-----LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|312377507|gb|EFR24321.1| hypothetical protein AND_11177 [Anopheles darlingi]
Length = 368
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 24/158 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLK--RASIKQVCMDKFHSVFVS--DDGRVWS 85
E+ IWG N NYNLG G+ Q R PE + + R +I +V + +HSVF++ + V++
Sbjct: 154 ELMIWGQNRNYNLGIGNVQGRAQPESAEHFRKTRTTIDRVAISAYHSVFLTHGTETEVYA 213
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMAS---------------ISQDHS 129
GHG GGRLG+G E+++ P K++ K D++ + +A+ I++D+
Sbjct: 214 TGHGVGGRLGMGIENTIAHPAKVSVPVKAGDRI-IDVATGKHHTLILTETSSRIIARDYH 272
Query: 130 VFLMLSGSVFVCGLNSFHQLGL--SPPPSHIVSPTPIP 165
+ V+V GLN Q GL IV P +P
Sbjct: 273 SIAIAEADVYVWGLNG-GQFGLKRDARSETIVLPKAMP 309
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 21/188 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGHSPV 208
GQLGH V
Sbjct: 272 GQLGHDSV 279
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGVNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQTSPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + SIK+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
Q ++ V CG +H + ++ + +T+G ++ GQLG
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG 170
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLM-LSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ + H++ L+ SG ++ G +
Sbjct: 271 CGQLGHDSVNDEVNPRRV-----LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++++ VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEEDRESPCHV---------KLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEESVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DEHIVHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|357608118|gb|EHJ65831.1| putative hect E3 ubiquitin ligase [Danaus plexippus]
Length = 2449
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 44/67 (65%), Gaps = 10/67 (14%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKK----------GKRLRSKL 270
Q TI+REDLPGFIFESNRGTKHSFTAET LGPE GW ++ RL +K
Sbjct: 830 QTTILREDLPGFIFESNRGTKHSFTAETFLGPELASGWADRRPVVSNGQSHSRSRLSAKS 889
Query: 271 EAVKQKV 277
EA K +V
Sbjct: 890 EAQKAQV 896
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 21/188 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGHSPV 208
GQLGH V
Sbjct: 272 GQLGHDSV 279
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGVNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQTSPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + SIK+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
Q ++ V CG +H + ++ + +T+G ++ GQLG
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG 170
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLM-LSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ + H++ L+ SG ++ G +
Sbjct: 271 CGQLGHDSVNDEVNPRRV-----LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 24/199 (12%)
Query: 30 EVYIWGTNANYNLGTG--SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G S++ P+L+ SL ++ Q+ H + ++DDGR++S G
Sbjct: 113 EVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWG 172
Query: 88 HGQGGRLGLGSESSV-VSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVFVCGLN 144
+ G+LGLGS S +P+++ + G+ +A I+ +HS L S +VF G N
Sbjct: 173 CNKYGQLGLGSSHSFHDTPQQIVCLR-----GIPIAQIASGGNHSFILTWSRAVFGWGKN 227
Query: 145 SFHQLGLSPP--PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA- 200
SF QLGL+ SH P SL+ +Q ++ + CG H+V + V++FG
Sbjct: 228 SFGQLGLNDEYDKSH-----PTLCKSLR-NQKVMYISCGEDHTVALTKEGGVFSFGAGGF 281
Query: 201 GQLGHSPVTVSSASVIEPK 219
GQLGH+ S+ + I PK
Sbjct: 282 GQLGHN----STQNEILPK 296
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
V+ WG + + L G + + P+ + L+ IK++ + H++ V+ DG+++SCG
Sbjct: 4 VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63
Query: 89 GQGGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G LG S VS + + V A+ + S+ + +G VF G N
Sbjct: 64 NEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKG 123
Query: 148 QLG 150
QLG
Sbjct: 124 QLG 126
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N+ LG + + P L SL+ + + + H+V ++ +G V+S G G
Sbjct: 221 VFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGG 280
Query: 91 GGRLGLGSESSVVSPKKL 108
G+LG S + + PK++
Sbjct: 281 FGQLGHNSTQNEILPKRV 298
>gi|254584334|ref|XP_002497735.1| ZYRO0F12298p [Zygosaccharomyces rouxii]
gi|238940628|emb|CAR28802.1| ZYRO0F12298p [Zygosaccharomyces rouxii]
Length = 1362
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 31 VYIWGTNANYNLGTGSQQTRD--VPELLDSLKR-------ASIKQVCMDKFHSVFVSDDG 81
V WG+N NY LGTG++ R +++ L+ KQ+CM ++HS+ ++ D
Sbjct: 143 VLTWGSNVNYQLGTGTKDDRQNMFQLVINQLETHGYLPSGEKFKQICMRRYHSLILTTDN 202
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPK-KLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
++++CG G GRLG G+ SP+ D L V M + S H++ L +V+
Sbjct: 203 KIYTCGTGSRGRLGNGTAE---SPQPTFTQAWDLKGLKVKMVASSDHHTLVLTEDDAVYS 259
Query: 141 CGLNSFHQLGLS-------PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSRE 192
G N++ Q G S + I +P R + + + V C + HS +S
Sbjct: 260 WGWNAYGQSGQSLGKKSDDKNVNKITVSSP-KRINFLDNDAITFVACSKIHSCAATASGN 318
Query: 193 VYTFGIHAGQLGHS 206
+ +G++ GQ+G S
Sbjct: 319 IILWGLNLGQMGGS 332
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDS--LKRASIKQVCMDKFHSVFVSDDGRVWSC 86
N++Y GT + LG G+ ++ P + LK +K V H++ +++D V+S
Sbjct: 202 NKIYTCGTGSRGRLGNGTAESPQ-PTFTQAWDLKGLKVKMVASSDHHTLVLTEDDAVYSW 260
Query: 87 G---HGQGGRLGLGSES--------SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
G +GQ G+ LG +S +V SPK++NF D + + S+ HS S
Sbjct: 261 GWNAYGQSGQ-SLGKKSDDKNVNKITVSSPKRINF---LDNDAITFVACSKIHSCAATAS 316
Query: 136 GSVFVCGLNSFHQLGLSPP 154
G++ + GLN Q+G S P
Sbjct: 317 GNIILWGLN-LGQMGGSKP 334
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 558 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 617
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 618 NSHGQLGLGKEFPSQTSPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 674
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 675 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 725
Query: 201 GQLGH 205
GQLGH
Sbjct: 726 GQLGH 730
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 508 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAG 565
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 566 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 622
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 623 LGLGKEFPSQTSPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 679
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 479 PQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 536
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 537 DQHIVHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 590
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
Q ++ V CG +H + ++ + +T+G ++ GQLG
Sbjct: 591 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG 624
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 665 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 724
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 725 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 779
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 780 QLG-TGHTCNVKCPSPV 795
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 117/249 (46%), Gaps = 25/249 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTG-SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +V+ WG A+ +G ++ VP + SL I QV HS+ +S +
Sbjct: 97 LALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKES 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
++S G Q G+LGLGSE S P+ + K G+ A I+ HS L +SG++
Sbjct: 157 NIYSWGQNQYGQLGLGSEKRKESAPRHI-----KSLSGIPFAHIAAGGGHSFALTISGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ P SL+ SQ +I +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDETDR---SDPALLKSLR-SQKIIYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGP--EF 254
GQLGH+ S++ + P+ + E + + + G +H+ S G F
Sbjct: 268 AGGYGQLGHN----SASHEVNPRK----VFELMGNIVTQIACGRQHTLAFVPSSGRIYSF 319
Query: 255 GGGWTGKKG 263
G G G+ G
Sbjct: 320 GLGGNGQLG 328
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R P LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S V+P+K+ FE + +A Q F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSASHEVNPRKV-FEL-MGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
Query: 151 L 151
+
Sbjct: 329 I 329
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 117/249 (46%), Gaps = 25/249 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTG-SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +V+ WG A+ +G ++ VP + SL I QV HS+ +S +
Sbjct: 97 LALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKES 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
++S G Q G+LGLGSE S P+ + K G+ A I+ HS L +SG++
Sbjct: 157 NIYSWGQNQYGQLGLGSEKRKESAPRHI-----KSLSGIPFAHIAAGGGHSFALTISGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ P SL+ SQ +I +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDETDR---SDPALLKSLR-SQKIIYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGP--EF 254
GQLGH+ S++ + P+ + E + + + G +H+ S G F
Sbjct: 268 AGGYGQLGHN----SASHEVNPRK----VFELMGNIVTQIACGRQHTLAFVPSSGRIYSF 319
Query: 255 GGGWTGKKG 263
G G G+ G
Sbjct: 320 GLGGNGQLG 328
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R P LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S V+P+K+ FE + +A Q F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSASHEVNPRKV-FEL-MGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
Query: 151 L 151
+
Sbjct: 329 I 329
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 183 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 242
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 243 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 299
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 300 QLGLSDEEDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 350
Query: 201 GQLGH 205
GQLGH
Sbjct: 351 GQLGH 355
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 104 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 161
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 162 DQHIVHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 215
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 216 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 270
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 271 --LAQVAAGGAHSFALSLS-GAVFGWG 294
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 133 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAG 190
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 191 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 247
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 248 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 304
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 290 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 349
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 350 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 404
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 405 QLG-TGHTCNVKCPSPV 420
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 87/180 (48%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N+ LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGVNSKGQLG--HEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQTSPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + SIK+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIVHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
Q ++ V CG +H + ++ + +T+G ++ GQLG
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLG 170
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG GS + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHGSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|296813641|ref|XP_002847158.1| BTB domain and ankyrin repeat protein [Arthroderma otae CBS 113480]
gi|238842414|gb|EEQ32076.1| BTB domain and ankyrin repeat protein [Arthroderma otae CBS 113480]
Length = 1616
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 45/220 (20%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL-----------------------------DSL 59
+E++++G+N N +LG G R PE + L
Sbjct: 242 DELFVFGSNKNLSLGVGDSDDRQFPERIVLTRPEALIQRFYEEKYENSAEFRAETGIPFL 301
Query: 60 KRAS---IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
R++ ++ V M K H+ ++ D ++ CG G GGRLG G E + SP+ ++
Sbjct: 302 VRSTPLVVQDVVMSKLHTAILTTDPFSNLYMCGFGPGGRLGTGHEGTSFSPQCVDSGAIA 361
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVS-------PTPI-PR 166
K +A ++ DH++ + G VF G N QLG + P + + PT + PR
Sbjct: 362 GK-HIASIALGLDHTIAISDQGEVFSWGSNKHGQLGYTLPKTKPTAGSSSNDNPTQLSPR 420
Query: 167 SSLK--SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ ++G HSVV++S +YTFG + GQLG
Sbjct: 421 QIFNPFKRERVLGAAASAIHSVVFTSSALYTFGRNDGQLG 460
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 28/195 (14%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS--LKRASIKQVCMDKFHSVFVSDD 80
++++ F+ +Y+ G LGTG + T P+ +DS + I + + H++ +SD
Sbjct: 322 LTTDPFSNLYMCGFGPGGRLGTGHEGTSFSPQCVDSGAIAGKHIASIALGLDHTIAISDQ 381
Query: 81 GRVWSCGHGQGGRLGL---------GSES----SVVSPKKL-NFEKDKDKLGVAMASISQ 126
G V+S G + G+LG GS S + +SP+++ N K + LG A ++I
Sbjct: 382 GEVFSWGSNKHGQLGYTLPKTKPTAGSSSNDNPTQLSPRQIFNPFKRERVLGAAASAI-- 439
Query: 127 DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR---SSLKSSQPLIGVCCG-- 181
HSV + S +++ G N QLGL + ++ PIPR +SL S I + C
Sbjct: 440 -HSV-VFTSSALYTFGRND-GQLGLIDADARSLTYQPIPRKVGASLFSDS--ISLVCAIE 494
Query: 182 RFHSVVYSSREVYTF 196
R V+ + EV+ F
Sbjct: 495 RATVVLLDNHEVWVF 509
>gi|195387405|ref|XP_002052386.1| GJ21961 [Drosophila virilis]
gi|194148843|gb|EDW64541.1| GJ21961 [Drosophila virilis]
Length = 2710
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 44/57 (77%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKV 277
Q TI+++D+ GFIFESNRGTKH+FTAETSLG +F GW +K KR +SK + K +V
Sbjct: 822 QVTILQDDVQGFIFESNRGTKHTFTAETSLGADFASGWATEKKKRTKSKTDIQKVQV 878
>gi|195119143|ref|XP_002004091.1| GI19489 [Drosophila mojavensis]
gi|193914666|gb|EDW13533.1| GI19489 [Drosophila mojavensis]
Length = 2647
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 45/57 (78%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKV 277
Q TI+++D+ GFIFESNRGTKHSFTAET+LG +F GW+ +K KR +SK + K +V
Sbjct: 762 QVTILQDDIQGFIFESNRGTKHSFTAETTLGADFASGWSTEKKKRSKSKTDIQKVQV 818
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNQPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQTSPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P+ + S+K+V H VF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGN--QPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
Q ++ V CG +H + ++ + +T+G ++ GQLG
Sbjct: 137 QTILQVSCGNWHCLALATDGQFFTWGKNSHGQLG 170
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|313245808|emb|CBY34800.1| unnamed protein product [Oikopleura dioica]
Length = 904
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 41 NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG--HGQGGRLGLGS 98
NLG + DV +L K + KFH + + GRV+S G Q GRLG +
Sbjct: 17 NLGFYKHKFSDVIQLP---KNTVVVHASFSKFHGICLDSAGRVYSWGVQSNQKGRLGYAA 73
Query: 99 ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHI 158
+V++PK++ F + + ++ + S +HSV + +G +V G NS QLGL +
Sbjct: 74 PPAVLNPKRIVF---PEAVKISYVATSDNHSVLISDNGRAYVFGSNSHGQLGLGGDTQFV 130
Query: 159 VSPTPIPRSSLKSS-QPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
SP + + K+ Q G FHS + + +VYT G GQLGH
Sbjct: 131 ESPRCVHVMNRKTKVQNFTKAAAGIFHSALINGNDVYTCGRDVGQLGH 178
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 31 VYIWGTNANYN--LGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY WG +N LG + P+ + + I V HSV +SD+GR + G
Sbjct: 56 VYSWGVQSNQKGRLGYAAPPAVLNPKRIVFPEAVKISYVATSDNHSVLISDNGRAYVFGS 115
Query: 89 GQGGRLGLGSESSVV-SPKKLNFEKDKDKL-GVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G+LGLG ++ V SP+ ++ K K+ A+ HS L+ V+ CG +
Sbjct: 116 NSHGQLGLGGDTQFVESPRCVHVMNRKTKVQNFTKAAAGIFHSA-LINGNDVYTCGRD-V 173
Query: 147 HQLG 150
QLG
Sbjct: 174 GQLG 177
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG T ++ + +P L+ L + I QV +H + ++ DG+ ++ G
Sbjct: 105 QLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQ 164
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+LGLG E S SP+++ K + + +A + HS L LSG+VF G N+
Sbjct: 165 NRHGQLGLGKEFPSQASPQRV---KSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAG 221
Query: 148 QLGLSPP-----PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA- 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG +
Sbjct: 222 QLGLSDETDRQSPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSF 272
Query: 201 GQLGH 205
GQLGH
Sbjct: 273 GQLGH 277
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P+ + SIK+V HS+F+ +DG V++CG G+LG E + P+++
Sbjct: 26 PQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGN--KPEQIGALA 83
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLG + + P I + +
Sbjct: 84 DQHIVHVACG---ESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKK---LNQ 137
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G + GQLG S AS P+ ++ E +P
Sbjct: 138 QMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS---PQRVKSL--EGIP 192
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 193 --LAQVAAGGAHSFALSLS-GAVFGWG 216
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 85/183 (46%), Gaps = 11/183 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G+N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 55 EVYTCGSNTKGQLG--HEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAG 112
Query: 90 QGGRLG-LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG +E SV P+ + K ++ + S H + L G F G N Q
Sbjct: 113 SDGQLGHTTTEDSVAIPRLI---KKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQ 169
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFG-IHAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G +AGQLG S
Sbjct: 170 LGLGKEFPSQASPQRV--KSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLS 226
Query: 207 PVT 209
T
Sbjct: 227 DET 229
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG + R P + L+ + + + H+ ++ G V++ G G
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 271
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 272 FGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 326
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 327 QLG-TGHTCNVKCPSPV 342
>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
Length = 1626
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N VY WG+N LGTG + P L+DSL I V ++HS+ +S G++W+ G
Sbjct: 867 NGVYSWGSNHYGQLGTGRRGQAPYPMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGW 926
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G+ PK L K + + A HS+ L +G VF G SF Q
Sbjct: 927 GVYGQLGHGAIDDCEKPKLL---KSLENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQ 983
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
LG + + I SP P+ +P+ + FH++ S +YT+G
Sbjct: 984 LG-NGSTTKITSPVPV----YGLPEPIKCIYTAYFHNLALSDVGRLYTWG 1028
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
++ G +S+ LG+ P + +P P+ + +I V CGR HS+ ++ VY++G
Sbjct: 815 LYTWGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVE-VIQVACGRNHSIALTTNGVYSWG 873
Query: 198 I-HAGQLG 204
H GQLG
Sbjct: 874 SNHYGQLG 881
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 94/190 (49%), Gaps = 15/190 (7%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTG-SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +V+ WG A+ +G ++ VP + SL I QV HS+ +S +
Sbjct: 81 LALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKES 140
Query: 82 RVWSCGHGQGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
++S G Q G+LGLGSE S P+ + K G+ A I+ HS L +SG++
Sbjct: 141 DIYSWGQNQYGQLGLGSEIKKESAPRHI-----KSLAGIPFAHIAAGGGHSFALTMSGAI 195
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ P SL+ SQ +I +CCG H+ + V+TFG
Sbjct: 196 FGWGRNKFGQLGLNDETDR---SAPALLKSLR-SQKIIHICCGEDHTAALTKEGGVFTFG 251
Query: 198 IHA-GQLGHS 206
GQLGH+
Sbjct: 252 AGGYGQLGHN 261
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R P LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 195 IFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 254
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S + V+P+K+ FE + +A Q F+ SG ++ GL QLG
Sbjct: 255 YGQLGHNSTNHEVNPRKV-FEL-MGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 312
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + ++K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|388853439|emb|CCF52838.1| uncharacterized protein [Ustilago hordei]
Length = 1805
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 110/253 (43%), Gaps = 64/253 (25%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELL-------------- 56
P D L + S +++ WG+N NYNLG G R P+ +
Sbjct: 165 PADALSFEPTRQHHSRTLTQLFTWGSNRNYNLGLGDGDDRQFPDKITLRRGEANGNMGSQ 224
Query: 57 ---DSLK----------RASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESS 101
D+ + R IK V M + H+V ++D+ VW CG G GRLG ++
Sbjct: 225 STQDTFRASLPAGKKFDRIGIKDVAMGRLHTVVLTDEKLSNVWVCGLGGSGRLGRSPQT- 283
Query: 102 VVSPKKLNFEKDKDKLGVA-MASISQDHSVFLMLSGSVFVCGLNSFHQLGLS-------- 152
+ +FE KD A + +++QDH++ + +G+V+ GLN F QLG +
Sbjct: 284 -----QTSFEPLKDFNETARVVAVAQDHTLIITDAGAVYSFGLNRFSQLGYTIEQGLGTV 338
Query: 153 -----------------PPPSHIVSPTPI-PRSSLKS--SQPLIGVCCGRFHSVVYSSRE 192
P ++ I PR L + + ++G C + HS V++S
Sbjct: 339 GSTTGKLGGGAGVTFGQTAPQNVELDIQISPRRILGALKKEVVLGAACSKLHSAVFTSEG 398
Query: 193 VYTFGIHAGQLGH 205
+YT+G + GQLG+
Sbjct: 399 LYTWGTNTGQLGY 411
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA- 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG +
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSY 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + +S + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 YGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEEDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIVHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ VP ++ L + +I QV +HS+ ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEEDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + H++ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIVHVACG---ESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +HS+ ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 87/180 (48%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + H++ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E +V P+ + + ++ + S HS+ L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDAVAVPRVI---QKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|452847443|gb|EME49375.1| hypothetical protein DOTSEDRAFT_68231 [Dothistroma septosporum
NZE10]
Length = 1571
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 17/152 (11%)
Query: 64 IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLG-- 118
I+ V M K H+ ++ D ++ CGHGQGGRLG G E + + +FE + L
Sbjct: 317 IQDVHMSKLHTAVLTTDPQANLYVCGHGQGGRLGTGDERT-----RFHFECIEGGALAGK 371
Query: 119 -VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPP--PSHIVSPTPIPRS---SLKSS 172
+A ++ Q+H++ L G +F G N++ QLG + P P+ + IP+ +LK
Sbjct: 372 HIATVALGQNHTLALSDDGEIFSWGNNAYGQLGYNLPKTPNDEDPISTIPQQIFGTLKR- 430
Query: 173 QPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ ++GV R HSV ++S +Y G + GQLG
Sbjct: 431 ETVVGVAASRVHSVAHTSASLYVMGKNDGQLG 462
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA- 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG +
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSY 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + +S + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 YGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEYPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEEDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIVHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEYPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 108/232 (46%), Gaps = 18/232 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG G+ P+ + +L I+Q+ H + V+ DG V S G
Sbjct: 91 EVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRN 150
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
Q G+LGLG+ + P+K+ + + + M + +H+ + G ++ G + L
Sbjct: 151 QNGQLGLGTTEDSLVPQKIQAFQ---GVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNL 207
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHSP 207
GL +V P + SL + +I V CG H++ V SS +YT+G GQLGH
Sbjct: 208 GLGDRNDRLV-PEKV---SLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGD 263
Query: 208 VTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
+ KV+A +R+ +I + G +H+ A TS G +G GW
Sbjct: 264 F---EDHLTPHKVEA--LRDS---YISMISGGWRHTM-ALTSDGNLYGWGWN 306
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E+Y WG NLG G + R VPE + + + V H++ VS G +++ G
Sbjct: 195 ELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWS 254
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G ++P K+ +D ++M S H++ L G+++ G N F Q+
Sbjct: 255 KYGQLGHGDFEDHLTPHKVEALRDSY---ISMISGGWRHTMALTSDGNLYGWGWNKFGQV 311
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLGH 205
G+ H SP + + + + L+ + CG H++ + R+ V+++G GQLGH
Sbjct: 312 GVGDNIDH-CSPVQV-KFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGH 367
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 89/177 (50%), Gaps = 9/177 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY G N + LG GS + L++SLK + HSV VS DG +S G
Sbjct: 156 QVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLN 215
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG+G+ + + P ++ V +A+ Q H++FL G VF CG N QL
Sbjct: 216 DCGQLGIGTRPNQLLPHRVELPSPHL---VRLAACGQYHTIFLTEEGMVFSCGKNLNGQL 272
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLG 204
GL S V PT I ++L+ +P + CG H+ VV +++TFG H GQLG
Sbjct: 273 GLGSRSSTNV-PTLI--AALQ-ERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLG 325
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 7/203 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+ +G N LG G++ + +P ++ ++ ++H++F++++G V+SCG
Sbjct: 209 AFSFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNL 268
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLGS SS P + +++ +M + H+ ++ G +F G N QLG
Sbjct: 269 NGQLGLGSRSSTNVPTLIAALQERP---ASMIACGYSHTCVVLEDGKLFTFGYNHQGQLG 325
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHA-GQLGHSPVT 209
L S +P+ +L++ + + C F V+ S E+++FG + GQLG T
Sbjct: 326 LGHTDS---VSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDST 382
Query: 210 VSSASVIEPKVQATIIREDLPGF 232
V+ P + + E GF
Sbjct: 383 DRLVPVLVPSMTKKNLSEIACGF 405
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 19/187 (10%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYI--------WGTNANYNLGTGSQQTRDVPELLDSLKRA 62
P HL+R + Q++ +++ G N N LG GS+ + +VP L+ +L+
Sbjct: 237 PSPHLVRL----AACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQER 292
Query: 63 SIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMA 122
+ H+ V +DG++++ G+ G+LGLG SV SP ++ ++ + V
Sbjct: 293 PASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRN---VKVVKI 349
Query: 123 SISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGR 182
S + L SG ++ G N QLGL +V P +P + K+ L + CG
Sbjct: 350 SCGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDRLV-PVLVPSMTKKN---LSEIACGF 405
Query: 183 FHSVVYS 189
H V S
Sbjct: 406 HHLVAIS 412
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 14/184 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ G N LG + + + L+ SL+R I +V S F++++G+V+ CG
Sbjct: 42 VFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLNS 101
Query: 91 GGRL------GLGSESSVVSPKKLNFEKDKDKLGVAMASI--SQDHSVFLMLSGSVFVCG 142
G+L G + S S E V S +H + + +G V+ CG
Sbjct: 102 TGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSCG 161
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-A 200
N+ QLGL S +SP+ + SLK + ++ C HSVV SS ++FG++
Sbjct: 162 CNNHGQLGLG---STKMSPSLLLVESLKHVR-VLSASCSYHHSVVVSSDGSAFSFGLNDC 217
Query: 201 GQLG 204
GQLG
Sbjct: 218 GQLG 221
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 117/251 (46%), Gaps = 25/251 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTG-SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +V+ WG ++ LG + VP + SL I QV +HS+ ++ G
Sbjct: 97 LALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGG 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
++S G + G+LGLG + + V SP+ + + G+ IS HS L LSG++
Sbjct: 157 EIFSWGQNKYGQLGLGQQGACVCSPQVI-----QSLQGIPFGQISAGGAHSFGLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL P+ +L+S Q ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLGDNDDR---RFPVLLKTLRSQQ-VVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGP--EF 254
GQLGH+ S+ + P+ + E + + + G +H+ S G F
Sbjct: 268 AGGYGQLGHN----STNHEVNPRK----VFELMGSVVSQIACGRQHTLAFIPSSGKIDSF 319
Query: 255 GGGWTGKKGKR 265
G G G+ G R
Sbjct: 320 GLGGNGQLGTR 330
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 24/230 (10%)
Query: 34 WGTNANYNLGTG--SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G ++ P + + ++ V + H+VF+ +DG V++CG
Sbjct: 4 WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E + P+++ D + S + H++ L G VF GL S QLGL
Sbjct: 64 GQ--LGHEKARKKPEQV---VSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIG-VCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPV 208
S + +PR+ S+ I V CG +HS+ + E++++G + GQLG +
Sbjct: 119 SI----VEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLG---L 171
Query: 209 TVSSASVIEPKVQATIIREDLPGFIF-ESNRGTKHSFTAETSLGPEFGGG 257
A V P+V + L G F + + G HSF S G FG G
Sbjct: 172 GQQGACVCSPQV-----IQSLQGIPFGQISAGGAHSFGLTLS-GAIFGWG 215
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG G R P LL +L+ + +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+K+ FE +G ++ I+ Q F+ SG + GL
Sbjct: 271 YGQLGHNSTNHEVNPRKV-FE----LMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNG 325
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVC 179
QLG + I SPTP+ + P + +C
Sbjct: 326 QLGTRSTCNRI-SPTPVKGCWRAHADPCVELC 356
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 108 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 167
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 168 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 224
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 225 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 275
Query: 201 GQLGH 205
GQLGH
Sbjct: 276 GQLGH 280
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 29 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 86
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 87 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 140
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 141 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 195
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 196 --LAQVAAGGAHSFALSLS-GAVFGWG 219
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 58 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 115
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 116 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 172
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 173 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 229
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 215 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 274
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 275 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 329
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 330 QLG-TGHTCNVKCPSPV 345
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEEDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIVHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 27/207 (13%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N+ +V+ WG LG G+ +T +P L+ L I QV H + +S DG
Sbjct: 96 LAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDG 155
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
++++ G G+LGLG P KL + K G+ +A I+ DHS L LSG+VF
Sbjct: 156 QLFTWGQNTSGQLGLGKGE----PSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVF 211
Query: 140 VCGLNSFHQLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EV 193
G N QLGL+ P HI SQ ++ + CG H+ + +
Sbjct: 212 GWGKNKAGQLGLNDIQDRAVPCHI---------KFLRSQKVVHISCGEEHTAALTKDGGL 262
Query: 194 YTFGIHA-GQLGHSPVTVSSASVIEPK 219
+TFG + GQLGH S+A+ + P+
Sbjct: 263 FTFGDGSWGQLGHG----STANELLPR 285
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY G+N+ LG + PE + +L I V + HS+ V++ G+V++ G G+
Sbjct: 54 VYTCGSNSCGQLG--HNKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGE 111
Query: 91 GGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG +E++V P+ + D +A H + L G +F G N+ QL
Sbjct: 112 EGQLGLGTTETAVRIPRLIKRLCDHR---IAQVMCGNQHCIALSKDGQLFTWGQNTSGQL 168
Query: 150 GLSP-PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLG 204
GL PS + P P SL + PL + G HS S S V+ +G + AGQLG
Sbjct: 169 GLGKGEPSKLF---PQPLKSL-AGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLG 222
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG Q R VP + L+ + + + H+ ++ DG +++ G G
Sbjct: 210 VFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGS 269
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSV-FLMLSGSVFVCGLNSFH 147
G+LG GS ++ + P+++ + +G ++ I+ + H++ F SG V+ G NS
Sbjct: 270 WGQLGHGSTANELLPRRV-----LELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHG 324
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSS--QPLIGVCCGRFHSVVYSSRE 192
QLG + S SP P+ S L S + + CG HS + S +
Sbjct: 325 QLG-TGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYSND 370
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 11/174 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGG 92
WG + LG G ++ P + +K++ HSVF+ DG V++CG G
Sbjct: 4 WGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCG 63
Query: 93 RLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS 152
+LG ++P+ F D + + S Q HS+ + G VF G QLGL
Sbjct: 64 QLGHNKPG--ITPE---FVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLG 118
Query: 153 PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
+ + P I R + V CG H + S +++T+G + +GQLG
Sbjct: 119 TTETAVRIPRLIKR---LCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLG 169
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 16/183 (8%)
Query: 30 EVYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V+ WG N N LG G+ +++R P+++ L I Q+ H + ++++G ++S G
Sbjct: 161 QVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGG 220
Query: 89 GQGGRLGLGSESSVVS--PKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLN 144
G+LGLG +S+ P++++ +GV +A ++ HSV L SG+VFV G N
Sbjct: 221 NASGQLGLGRDSTGNERLPRRVS-----HLVGVPLALVACGAMHSVGLTPSGTVFVWGRN 275
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQ 202
S QLGLS + P L+ SQ + VCCG H+ ++ V+TFG GQ
Sbjct: 276 SCGQLGLSDQRDRL---HPTVLKPLR-SQRIKHVCCGENHTAALTADGGVFTFGAGTYGQ 331
Query: 203 LGH 205
LGH
Sbjct: 332 LGH 334
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E++ WG NA+ LG G T + +P + L + V HSV ++ G V+ G
Sbjct: 214 ELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWG 273
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGL + + P L + + + ++H+ L G VF G ++
Sbjct: 274 RNSCGQLGLSDQRDRLHPTVLKPLRSQR---IKHVCCGENHTAALTADGGVFTFGAGTYG 330
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS--SREVYTFGI-HAGQLG 204
QLG + V + SQ + CGR H+V Y+ S +Y FG+ +GQLG
Sbjct: 331 QLGHGVKVNEAVPRRVVELMGTAISQ----LSCGRCHTVAYAPQSGRLYIFGLGMSGQLG 386
Query: 205 HSPVTVSSASVIEP 218
+ + S+ V P
Sbjct: 387 NGTLESSALPVTVP 400
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPEL--LDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY G N LG Q R + +L + +L I+ V + HS+ +SD G+V+S G
Sbjct: 112 VYSCGANDFGQLG----QDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGC 167
Query: 89 GQGGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+LG G+ E S + PK + K L + + H + L +G +F G N+
Sbjct: 168 NRNGQLGCGTEEESRLRPKVI---KKLATLHIVQIACGAVHCLALANNGELFSWGGNASG 224
Query: 148 QLGLSPPPSHIVSPTPIPRS-SLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
QLGL + +PR S PL V CG HSV + S V+ +G ++ GQLG
Sbjct: 225 QLGLGRDST---GNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLG 281
Query: 205 HS 206
S
Sbjct: 282 LS 283
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 31 VYIWGTNANYNLG-------TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
+Y WG N LG ++ PE + ++++V H++ + +G V
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
+SCG G+LG S +KL + + + HS+ L +G VF G
Sbjct: 113 YSCGANDFGQLGQDR-----SMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGC 167
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-G 201
N QLG + P I + ++ ++ + CG H + ++ E++++G +A G
Sbjct: 168 NRNGQLGCGTEEESRLRPKVIKK---LATLHIVQIACGAVHCLALANNGELFSWGGNASG 224
Query: 202 QLG 204
QLG
Sbjct: 225 QLG 227
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 21/147 (14%)
Query: 83 VWSCGHGQGGRLGL-------GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
++S G G G LGL +E+ V P+++ + V + H++ L+ +
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERV---RRFGTRAVREVACGHKHTLVLLAN 109
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVY 194
GSV+ CG N F QLG S + + + S+ + V CG HS+ S +V+
Sbjct: 110 GSVYSCGANDFGQLGQDR------SMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVF 163
Query: 195 TFGIH-AGQLGHSPVTVSSASVIEPKV 220
++G + GQLG S + PKV
Sbjct: 164 SWGCNRNGQLG---CGTEEESRLRPKV 187
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 97/185 (52%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG T ++ + +P L+ L + I QV +H + ++ DG+ ++ G
Sbjct: 105 QLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQ 164
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+LGLG E S SP+++ K + + +A + HS L LSG+VF G N+
Sbjct: 165 NRHGQLGLGKEFPSQASPQRV---KSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAG 221
Query: 148 QLGLSPP-----PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA- 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG +
Sbjct: 222 QLGLSDETDRQSPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSF 272
Query: 201 GQLGH 205
GQLGH
Sbjct: 273 GQLGH 277
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P+ + SIK+V HS+F+ +DG V++CG G+LG E + P+++
Sbjct: 26 PQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 83
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLG + + P I + +
Sbjct: 84 DQHIIHVACG---ESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKK---LNQ 137
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G + GQLG S AS P+ ++ E +P
Sbjct: 138 QMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS---PQRVKSL--EGIP 192
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 193 --LAQVAAGGAHSFALSLS-GAVFGWG 216
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 81/183 (44%), Gaps = 11/183 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 55 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAG 112
Query: 90 QGGRLG-LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG +E SV P+ + K ++ + S H + L G F G N Q
Sbjct: 113 SDGQLGHTTTEDSVAIPRLI---KKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQ 169
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFG-IHAGQLGHS 206
LGL SP R PL V G HS S S V+ +G +AGQLG S
Sbjct: 170 LGLGKEFPSQASPQ---RVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLS 226
Query: 207 PVT 209
T
Sbjct: 227 DET 229
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG + R P + L+ + + + H+ ++ G V++ G G
Sbjct: 212 VFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 271
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 272 FGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 326
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 327 QLG-TGHTCNVKCPSPV 342
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 94/189 (49%), Gaps = 13/189 (6%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +V+ WG +N LG + ++ VP + L I QV +HS +S G
Sbjct: 97 LALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGG 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
+V+S G Q G+LGLG S +S ++ + G+ A +S HS + LSG+VF
Sbjct: 157 QVFSWGQNQFGQLGLGMHGSSISTPQI----IQSLQGIPFAQLSAGGAHSFAITLSGAVF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGI 198
G N F QLGL+ P SL+ SQ +I V CG H+ + R V+TFG
Sbjct: 213 GWGKNKFGQLGLNDTKDRWF---PALLKSLR-SQRVIFVSCGEDHTAALTKLRGVFTFGA 268
Query: 199 HA-GQLGHS 206
GQLGH+
Sbjct: 269 GGYGQLGHN 277
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 19/125 (15%)
Query: 87 GHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
G+ G+LGLG E VV P+K F K V H+VFL+ G+V+ CG N
Sbjct: 5 GNASYGQLGLGGIDEEIVVEPRKCEFFHGKR---VCDVGCGLKHTVFLLDDGTVYTCGCN 61
Query: 145 SFHQLGLS---PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA 200
QLG P H+V+ +Q ++ V CG H++ + + +V+++G+ +
Sbjct: 62 DLGQLGHEKSRKKPEHVVA---------LDAQIIVAVSCGESHTLALNDKGQVFSWGLGS 112
Query: 201 -GQLG 204
GQLG
Sbjct: 113 NGQLG 117
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H+VF+ DDG V++CG G+ LG E S P+ + D + S + H++ L
Sbjct: 45 HTVFLLDDGTVYTCGCNDLGQ--LGHEKSRKKPEHV---VALDAQIIVAVSCGESHTLAL 99
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-R 191
G VF GL S QLGL+ + P I S + V CG +HS S
Sbjct: 100 NDKGQVFSWGLGSNGQLGLNNFEECVRVPRNI---KCLSDVQIAQVACGYWHSHALSKGG 156
Query: 192 EVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIF-ESNRGTKHSFTAETSL 250
+V+++G Q G + + +S+ P+ I + L G F + + G HSF S
Sbjct: 157 QVFSWG--QNQFGQLGLGMHGSSISTPQ-----IIQSLQGIPFAQLSAGGAHSFAITLS- 208
Query: 251 GPEFGGG 257
G FG G
Sbjct: 209 GAVFGWG 215
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG + R P LL SL+ + V + H+ ++ V++ G G
Sbjct: 211 VFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG + ++P+K+ FE +G + IS + +L+ V L S
Sbjct: 271 YGQLGHNCTNHEINPRKV-FE----LMGNVVTQISCGSTRWLLRPPLVRCTHLGSVVTAS 325
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLI 176
L P P + + +P S + S P++
Sbjct: 326 LVPVP--LATEKALPLSKVPSWPPVL 349
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 20/232 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG LG G+ VP + +L+ I+Q+ H + V+ DG V+S G Q
Sbjct: 79 IYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQ 138
Query: 91 GGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG ++ S+V K L FE + V M + +H+ + SG ++ G + L
Sbjct: 139 NGQLGLGDTDDSLVPHKLLAFE----GVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNL 194
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSP 207
GL ++ P +P + + V CG H++ S S ++YT+G GQLGH
Sbjct: 195 GLGDRGDRML-PAEVPAV---GDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGD 250
Query: 208 VTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
A + P A + + I + + G +H+ A T G +G GW
Sbjct: 251 Y----ADHLLPHQVAALAEFN----ITQVSGGWRHT-VALTEAGKLYGWGWN 293
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 9/182 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EVY WG N N LG G VP L + + S+K + H+ V+D G+++ G
Sbjct: 129 GEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGW 188
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ G LGLG + P ++ D+ + M + H++ + SG ++ G + + Q
Sbjct: 189 GRYGNLGLGDRGDRMLPAEVPAVGDEK---MCMVACGWRHTIAVSQSGKLYTYGWSKYGQ 245
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG H++ + +Q V G H+V + + ++Y +G + GQ+G
Sbjct: 246 LGHGDYADHLLPHQVAALAEFNITQ----VSGGWRHTVALTEAGKLYGWGWNKFGQVGSG 301
Query: 207 PV 208
V
Sbjct: 302 DV 303
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++Y WG NLG G + R +P + ++ + V H++ VS G++++ G
Sbjct: 181 GKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGW 240
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LG G + + P ++ + + S H+V L +G ++ G N F Q
Sbjct: 241 SKYGQLGHGDYADHLLPHQVAALAE---FNITQVSGGWRHTVALTEAGKLYGWGWNKFGQ 297
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHS 206
+G H SP I S Q ++ V CG H+V + + VY++G +GQLGH
Sbjct: 298 VGSGDVDDH-TSPQLI--SIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHG 354
Query: 207 PVTVSSA 213
SA
Sbjct: 355 DAVDRSA 361
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
++ +Q ++Y +G + LG G +P + +L +I QV H+V +++ G+
Sbjct: 227 IAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGK 286
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G G SP+ ++ + V S H+V + +V+ G
Sbjct: 287 LYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQR--VVQVSCGWRHTVAVTDKNNVYSWG 344
Query: 143 LNSFHQLG 150
+ QLG
Sbjct: 345 RGTSGQLG 352
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD-SLKRASIKQVCMDKFHSVFVSDDG 81
V+ + ++Y WG N +G+G P+L+ + + QV H+V V+D
Sbjct: 279 VALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKN 338
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLN 109
V+S G G G+LG G +PK +
Sbjct: 339 NVYSWGRGTSGQLGHGDAVDRSAPKGIQ 366
>gi|428172427|gb|EKX41336.1| hypothetical protein GUITHDRAFT_74757, partial [Guillardia theta
CCMP2712]
Length = 180
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 12/185 (6%)
Query: 28 FNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
+ + WG NY LG T + ++ ++ L I+ V K HSV V G VW+
Sbjct: 1 MGQCFAWGAGNNYQLGQTAACLSKKKASKVEELPMG-IRSVSTSKLHSVVVGCHGEVWTT 59
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G GGRLG G E S+ +++ +K+ V+M ++S +H++ + G+VF G N F
Sbjct: 60 GFGTGGRLGHGEEKSLALFQRIT---SLEKVRVSMVAVSDNHTIAIADRGAVFAWGSNKF 116
Query: 147 HQLGLSPPPSHI----VSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-A 200
QLG+ + + VS P + L+ Q ++ H+V V + ++T G +
Sbjct: 117 GQLGIGQQAAGVSEEEVSLAPKRLTELR-KQCIVAAAAAANHTVLVQDNGSLWTCGSNLQ 175
Query: 201 GQLGH 205
GQLGH
Sbjct: 176 GQLGH 180
>gi|156845985|ref|XP_001645881.1| hypothetical protein Kpol_1045p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156116551|gb|EDO18023.1| hypothetical protein Kpol_1045p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 1366
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 23/191 (12%)
Query: 35 GTNANYNLGTGSQQTR------DVPELLDS---LKRASIKQVCMDKFHSVFVSDDGRVWS 85
G+N NY LGTG++ R +V +L S L I+ + ++HS+ ++ + +++
Sbjct: 170 GSNVNYQLGTGTKDDRQNFYQINVHQLETSSMLLPNLRIRNSYITRYHSLIITSNNEIFT 229
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDK--DKLGVAMASISQDHSVFLMLSGSVFVCGL 143
CG+ GR+G G V+ + ++ K KL + S H++ L +G ++ G
Sbjct: 230 CGNSNRGRVGNG----VIDLPQSHYAKVDGLPKLEIKEIKTSDHHTMVLYKNGDIYSWGW 285
Query: 144 NSFHQLGLS-------PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYT 195
N + QLG S P SH V R ++ ++ + + C + HS V + + ++Y
Sbjct: 286 NYYGQLGHSMSRQLDDPKNSHNVCSMVPKRLTILENEEITSISCSKIHSCVVTKKGQIYL 345
Query: 196 FGIHAGQLGHS 206
+G++ GQLG S
Sbjct: 346 WGLNVGQLGSS 356
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 16/183 (8%)
Query: 30 EVYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V+ WG N N LG G+ +++R P+++ L I Q+ H + ++++G ++S G
Sbjct: 155 QVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGG 214
Query: 89 GQGGRLGLGSESSVVS--PKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLN 144
G+LGLG +S+ P++++ +GV +A ++ HSV L SG+VFV G N
Sbjct: 215 NASGQLGLGRDSTGNERLPRRVS-----HLVGVPLALVACGAMHSVGLTPSGTVFVWGRN 269
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQ 202
S QLGLS + P L+ SQ + VCCG H+ ++ V+TFG GQ
Sbjct: 270 SCGQLGLSDQRDRL---HPTVLKPLR-SQRIKHVCCGENHTAALTADGGVFTFGAGTYGQ 325
Query: 203 LGH 205
LGH
Sbjct: 326 LGH 328
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 14/195 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E++ WG NA+ LG G T + +P + L + V HSV ++ G V+ G
Sbjct: 208 ELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWG 267
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGL + + P L + + + ++H+ L G VF G ++
Sbjct: 268 RNSCGQLGLSDQRDRLHPTVLKPLRSQR---IKHVCCGENHTAALTADGGVFTFGAGTYG 324
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIG-VCCGRFHSVVYS--SREVYTFGI-HAGQL 203
QLG + +PR ++ I + CGR H+V Y+ S +Y FG+ +GQL
Sbjct: 325 QLG-----HGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQL 379
Query: 204 GHSPVTVSSASVIEP 218
G+ + S+ V P
Sbjct: 380 GNGTLESSALPVTVP 394
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPEL--LDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY G N LG Q R + +L + +L I+ V + HS+ +SD G+V+S G
Sbjct: 106 VYSCGANDFGQLG----QDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGC 161
Query: 89 GQGGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+LG G+ E S + PK + K L + + H + L +G +F G N+
Sbjct: 162 NRNGQLGCGTEEESRLRPKVI---KKLATLHIVQIACGAVHCLALANNGELFSWGGNASG 218
Query: 148 QLGLSPPPSHIVSPTPIPRS-SLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
QLGL + +PR S PL V CG HSV + S V+ +G ++ GQLG
Sbjct: 219 QLGLGRDST---GNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLG 275
Query: 205 HS 206
S
Sbjct: 276 LS 277
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 31 VYIWGTNANYNLG-------TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
+Y WG N LG ++ PE + ++++V H++ + +G V
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
+SCG G+LG S +KL + + + HS+ L +G VF G
Sbjct: 107 YSCGANDFGQLGQDR-----SMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGC 161
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-G 201
N QLG + P I + ++ ++ + CG H + ++ E++++G +A G
Sbjct: 162 NRNGQLGCGTEEESRLRPKVIKK---LATLHIVQIACGAVHCLALANNGELFSWGGNASG 218
Query: 202 QLG 204
QLG
Sbjct: 219 QLG 221
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 21/147 (14%)
Query: 83 VWSCGHGQGGRLGL-------GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
++S G G G LGL +E+ V P+++ + V + H++ L+ +
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERV---RRFGTRAVREVACGHKHTLVLLAN 103
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVY 194
GSV+ CG N F QLG S + + + S+ + V CG HS+ S +V+
Sbjct: 104 GSVYSCGANDFGQLGQDR------SMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVF 157
Query: 195 TFGIH-AGQLGHSPVTVSSASVIEPKV 220
++G + GQLG S + PKV
Sbjct: 158 SWGCNRNGQLG---CGTEEESRLRPKV 181
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + L V S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLIQKLNQQTILQV---SCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV-FLMLSGSVFVCGLNSFHQL 149
G+LG S + V+P+++ + V + + H++ F+ SG ++ G + QL
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSE---VTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 150 GLSPPPSHIVSPTPI 164
G + ++ P+P+
Sbjct: 328 G-TGHTCNVKCPSPV 341
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 92/191 (48%), Gaps = 17/191 (8%)
Query: 23 VSSNQFNEVYIWG--TNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD 80
++ N +V+ WG L T + R VP + SL I QV HS+ +S D
Sbjct: 97 LALNDKGQVFSWGHAVYGQIGLSTAEEYIR-VPRNIKSLSDVQIVQVACGHHHSLALSKD 155
Query: 81 GRVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGS 137
++S G Q G+LGLG E +P+ + K G+ A I+ HS L +SG+
Sbjct: 156 SDIFSWGQNQYGQLGLGLEIKKECAPRHI-----KSLSGIPFAHIAAGGGHSFALTISGA 210
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTF 196
+F G N F QLGL+ V P SL+ SQ +I +CCG H+ + V+TF
Sbjct: 211 IFGWGRNKFGQLGLTDETDRNV---PALLKSLR-SQKIIHICCGEDHTAALTKEGGVFTF 266
Query: 197 GIHA-GQLGHS 206
G GQLGH+
Sbjct: 267 GAGGYGQLGHN 277
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R+VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S + V+P+K+ FE + +A Q F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTNHEVNPRKV-FEL-MGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
Length = 526
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV++ GTN++ LGTG Q+ P +D L I + H V V+ DG V+S G
Sbjct: 40 DEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWG 99
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEK-DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG GS + +SP +++ +K + VA S HS+ L G V+ G N+
Sbjct: 100 HNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGS---HHSMVLTCDGEVYAWGYNNS 156
Query: 147 HQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
Q+G S + PIPR +S ++ +IG+ CG+ S+ V + EVY +G + GQ
Sbjct: 157 GQVG-----SGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQ 211
Query: 203 LG 204
LG
Sbjct: 212 LG 213
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EVY WG N + +G+GS + +P + S L+ ++ + + S+ V D+G V++ G+
Sbjct: 147 EVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGY 206
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLGS + +P ++ + V H++ L G ++ G NS+ Q
Sbjct: 207 NGNGQLGLGSSGNQPTPCRI---AALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263
Query: 149 LG 150
LG
Sbjct: 264 LG 265
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG GS + P + +L+ ++QV H++ ++D+G +++ G
Sbjct: 200 EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGAN 259
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++S+ P ++ +K++
Sbjct: 260 SYGQLGTGNKSNQSYPVQVIVDKER 284
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 7/132 (5%)
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML 134
++++ + V+ G G LG G S++ P++++ K V+++ S H V +
Sbjct: 34 LYLTKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRI--VSLSYGSGPHVVIVTS 91
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EV 193
G V+ G N++ QLG + + +SP + + + ++ I V CG HS+V + EV
Sbjct: 92 DGEVYSWGHNAYSQLG-NGSTNQALSPCQVSTNLI--NKKAISVACGSHHSMVLTCDGEV 148
Query: 194 YTFGI-HAGQLG 204
Y +G ++GQ+G
Sbjct: 149 YAWGYNNSGQVG 160
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + L V S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLIQKLNQQTILQV---SCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV-FLMLSGSVFVCGLNSFHQL 149
G+LG S + V+P+++ + V + + H++ F+ SG ++ G + QL
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSE---VTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 150 GLSPPPSHIVSPTPI 164
G + ++ P+P+
Sbjct: 328 G-TGHTCNVKCPSPV 341
>gi|354466481|ref|XP_003495702.1| PREDICTED: inhibitor of Bruton tyrosine kinase-like, partial
[Cricetulus griseus]
Length = 219
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 1 MTVMDNEEMRPIDHLIRDR--KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ V D E + P+D L++DR + + EVY WG N N+ LG GSQ ++ PEL+D
Sbjct: 113 LYVQDKEGLSPLDLLMKDRPNHVVFKNTDPTEVYTWGDNTNFTLGHGSQNSKHHPELVDL 172
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSC 86
R+ +KQV + KFHSVF+S G+V++C
Sbjct: 173 FSRSGVYVKQVVLCKFHSVFLSQKGQVYTC 202
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 15/206 (7%)
Query: 12 IDHLIRDRKIDVSSNQF--------NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS 63
++ L+ ++ I VS F N+ Y WG LG G P+L++SL S
Sbjct: 144 VEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLS 203
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
+K + H+ + ++G+V+ CG G G+LG GS+ + PK L + + S
Sbjct: 204 VKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKEDIYIPKLL--QGSLTNKSIKEVS 261
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
+ HS + G V+ G + P I+SP + + +S + + CG
Sbjct: 262 LGYQHSAVITTKGKVYTWGQGGRLGHIYNGPEPDILSPKLVEK---LNSIIAVNISCGHS 318
Query: 184 HSVVYSS-REVYTFGIHAGQLGHSPV 208
H+VV S+ +VY +G+ LGH +
Sbjct: 319 HTVVISNIGDVYAWGV-TRNLGHGVI 343
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRD------VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
+Y WG N + LG GS P+L++ L + +V FH+ ++D + +
Sbjct: 113 LYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAY 172
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
+ G G GRLG G + V +PK + + L V H+ L+ +G V+ CG
Sbjct: 173 TWGLGMQGRLGHGDTNDVYTPKLI---ESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGG 229
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHAGQL 203
+F +LG I P + S +++ + V G HS V +++ +VYT+G G+L
Sbjct: 230 AFGKLGFGSKED-IYIPKLLQGS--LTNKSIKEVSLGYQHSAVITTKGKVYTWG-QGGRL 285
Query: 204 GH 205
GH
Sbjct: 286 GH 287
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 10/180 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS-IKQVCMDKFHSVFVSDDGRVWSCGHG 89
V WG++ LG +++ P+L++SL + IK+VC HS ++ G + G+G
Sbjct: 10 VVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYG 69
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG +V P+ + K+ V S S HS ++ G ++ G N +L
Sbjct: 70 GCGQLGLGDLKDIVIPRVMTSIKN-----VINVSCSDRHSAAILEDGRLYTWGCNKSGKL 124
Query: 150 GL-SPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSVVYSS-REVYTFGI-HAGQLGH 205
G+ S + + P+ K ++ +I V CG FH+ + + YT+G+ G+LGH
Sbjct: 125 GIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGH 184
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 23/242 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E+ +WG LG G + +P ++ S+K I C D+ HS + +DGR+++ G
Sbjct: 62 ELIVWGYGGCGQLGLGDLKDIVIPRVMTSIKNV-INVSCSDR-HSAAILEDGRLYTWGCN 119
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKL---GVAMASISQDHSVFLMLSGSVFVCGLNSF 146
+ G+LG+GS + ++ + + +KL V S H+ L + GL
Sbjct: 120 KSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQ 179
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHA-GQLGH 205
+LG + + +P I + S + + VC G +++ ++ +VY G A G+LG
Sbjct: 180 GRLG-HGDTNDVYTPKLIESLAGLSVKNI--VCGGHHTAILLNNGKVYFCGGGAFGKLGF 236
Query: 206 SPVTVSSASVIEPK-VQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGK 264
S + PK +Q ++ + I E + G +HS T G +T +G
Sbjct: 237 G----SKEDIYIPKLLQGSLTNKS----IKEVSLGYQHSAVITTK-----GKVYTWGQGG 283
Query: 265 RL 266
RL
Sbjct: 284 RL 285
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV++ GTN++ LGTG Q+ P +D L I + H V V+ DG V+S G
Sbjct: 40 DEVFVMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWG 99
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEK-DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG GS + +SP +++ +K + VA S HS+ L G V+ G N+
Sbjct: 100 HNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGS---HHSMVLTCDGEVYAWGYNNS 156
Query: 147 HQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
Q+G S + PIPR +S ++ +IG+ CG+ S+ V + EVY +G + GQ
Sbjct: 157 GQVG-----SGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQ 211
Query: 203 LG 204
LG
Sbjct: 212 LG 213
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 6 NEEMRPID---HLIRDRKIDVSSNQFN--------EVYIWGTNANYNLGTGSQQTRDVPE 54
N+ + P +LI + I V+ + EVY WG N + +G+GS + +P
Sbjct: 112 NQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPR 171
Query: 55 LLDS-LKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKD 113
+ S L+ ++ + + S+ V D+G V++ G+ G+LGLGS + +P ++
Sbjct: 172 KVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRI---AA 228
Query: 114 KDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
+ V H++ L G ++ G NS+ QLG
Sbjct: 229 LQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLG 265
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG GS + P + +L+ ++QV H++ ++D+G +++ G
Sbjct: 200 EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGAN 259
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++S+ P ++ +K++
Sbjct: 260 SYGQLGTGNKSNQSYPVQVIVDKER 284
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 7/132 (5%)
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML 134
++++ + V+ G G LG G S++ P++++ K V+++ S H V +
Sbjct: 34 LYLTKNDEVFVMGTNSSGCLGTGDAQSILEPRRIDMLSGKRI--VSLSYGSGPHVVIVTS 91
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EV 193
G V+ G N++ QLG + + +SP + + + ++ I V CG HS+V + EV
Sbjct: 92 DGEVYSWGHNAYSQLG-NGSTNQALSPCQVSTNLI--NKKAISVACGSHHSMVLTCDGEV 148
Query: 194 YTFGI-HAGQLG 204
Y +G ++GQ+G
Sbjct: 149 YAWGYNNSGQVG 160
>gi|409081175|gb|EKM81534.1| hypothetical protein AGABI1DRAFT_54346, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 1454
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 96/221 (43%), Gaps = 34/221 (15%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRDVPELL--------DSLKRASI---------KQVCMD 70
+ ++Y WGTN N LG G R PEL+ L+R ++ + V M
Sbjct: 152 YADLYTWGTNVNAALGLGDSNDRAYPELVVFPRREDEADLERQTLSARFLPIKAEHVEMS 211
Query: 71 KFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLN--FEKDKDKLGVAMASIS- 125
K H+V + + G + CG G GGR S+ V P K +L + +I+
Sbjct: 212 KLHTVVSTSETGGNLRVCGFGSGGRRAYLSD-LVHGPNSHTQYLLKSLSQLTQVITAIAL 270
Query: 126 -QDHSVFLMLSGSVFVCGLNSFHQLGLS-PPPSHIVSPTPIPRSSLKSSQPL-----IGV 178
QDH++ L +G V GLN F QLG PP+ PI S + PL GV
Sbjct: 271 GQDHTLALTKAGEVLSWGLNRFSQLGYPVDPPTSGRLEEPIQYSPRRVQGPLKKEVVKGV 330
Query: 179 CCGRFHSVVYSSREVYTFGIHAGQLGHS----PVTVSSASV 215
+ S ++ VYT+G + GQLG+ PV V V
Sbjct: 331 AASKVASACWTDDSVYTWGTNNGQLGYDKAAQPVQVQPRKV 371
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 92/191 (48%), Gaps = 17/191 (8%)
Query: 23 VSSNQFNEVYIWG--TNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD 80
++ N +V+ WG L T + R VP + SL I QV HS+ +S D
Sbjct: 97 LALNDKGQVFSWGHAVYGQIGLSTAEEYIR-VPRNIKSLSDVQIVQVACGHHHSLALSKD 155
Query: 81 GRVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGS 137
++S G Q G+LGLG E +P+ + K G+ A I+ HS L +SG+
Sbjct: 156 SDIFSWGQNQYGQLGLGLEIKKECAPRHI-----KSLSGIPFAHIAAGGGHSFALTISGA 210
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTF 196
+F G N F QLGL+ V P SL+ SQ +I +CCG H+ + V+TF
Sbjct: 211 IFGWGRNKFGQLGLTDETDRNV---PALLKSLR-SQKIIHICCGEDHTAALTKEGGVFTF 266
Query: 197 GIHA-GQLGHS 206
G GQLGH+
Sbjct: 267 GAGGYGQLGHN 277
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R+VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S + V+P+K+ FE + +A Q F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTNHEVNPRKV-FEL-MGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328
>gi|315040854|ref|XP_003169804.1| BTB/POZ domain-containing protein 1 [Arthroderma gypseum CBS
118893]
gi|311345766|gb|EFR04969.1| BTB/POZ domain-containing protein 1 [Arthroderma gypseum CBS
118893]
Length = 1655
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 46/220 (20%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL------------------DS-----------L 59
+E++ +G+N N +LG G R PE + DS L
Sbjct: 238 DELFTFGSNKNLSLGVGDSDDRQFPERITLPRSEALIHRFYEEKYEDSPESETPEEIPFL 297
Query: 60 KRAS---IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
RA+ ++ V M K H+ ++ D ++ CG G GGRLG G E + SP ++
Sbjct: 298 VRATPLIVQDVAMSKLHTAILTTDPCSNLYMCGFGPGGRLGTGHEGTSFSPVCVDSGAIA 357
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV--SPTPIPRSSLKSS 172
K ++A + DH++ + G VF G N QLG + P + SP +P + L
Sbjct: 358 GKRITSVA-LGLDHTIAISDQGEVFSWGSNKHGQLGYTLPKTKPTASSPNDVP-TQLSPR 415
Query: 173 Q--------PLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
Q ++G HS V++S +YTFG + GQLG
Sbjct: 416 QIFNPFKRDRILGAAASSIHSAVFTSSALYTFGRNDGQLG 455
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 25/220 (11%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS--LKRASIKQVCMDKFHSVFVSDD 80
++++ + +Y+ G LGTG + T P +DS + I V + H++ +SD
Sbjct: 318 LTTDPCSNLYMCGFGPGGRLGTGHEGTSFSPVCVDSGAIAGKRITSVALGLDHTIAISDQ 377
Query: 81 GRVWSCGHGQGGRLGL---------GSESSV---VSPKKL--NFEKDKDKLGVAMASISQ 126
G V+S G + G+LG S + V +SP+++ F++D+ LG A +SI
Sbjct: 378 GEVFSWGSNKHGQLGYTLPKTKPTASSPNDVPTQLSPRQIFNPFKRDR-ILGAAASSI-- 434
Query: 127 DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS--SQPLIGVCC-GRF 183
HS + S +++ G N QLGL + ++ PIPR S S P+ VC R
Sbjct: 435 -HSA-VFTSSALYTFGRND-GQLGLMDADARSLTTQPIPRKVGASLFSVPISSVCAIERA 491
Query: 184 HSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQAT 223
V+ + EV+ F + P+TVS ++ I AT
Sbjct: 492 TVVLLENHEVWVFTHYGYSRLIFPLTVSVSNFIRSSFMAT 531
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIVHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVTAGGAHSFALSLS-GAVFGWG 215
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ +G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 104/233 (44%), Gaps = 21/233 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY WG LG G +P + +L+ I+Q+ H + V+ D +V S G
Sbjct: 87 DVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRN 146
Query: 90 QGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G LGLG+ + P+K+ FE ++ + M + +HSV + G+++ G +
Sbjct: 147 QNGELGLGTAEDSLLPQKIQIFE----EIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGN 202
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLGHS 206
LGL + +P + V CG H++ V SS +YT G GQLGH
Sbjct: 203 LGLGDRNDRL-----LPEKVTVDGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHG 257
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
++ KVQA + FI + + G +HS A TS G G GW
Sbjct: 258 DF---EDHLVPRKVQALSDK-----FISQVSGGWRHSM-ALTSSGQLLGWGWN 301
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++V WG N N LG G+ + +P+ + + IK V HSV ++ DG ++ G
Sbjct: 138 SQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGW 197
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ G LGLG + + P+K+ + DK +AM + H++ + SG ++ G + Q
Sbjct: 198 GRYGNLGLGDRNDRLLPEKVTVDGDK----MAMVACGWRHTICVSSSGGLYTNGWGKYGQ 253
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG--RFHSVVYSSREVYTFGIHA-GQLG 204
LG H+V PR S I G R + SS ++ +G + GQ+G
Sbjct: 254 LGHGDFEDHLV-----PRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIG 307
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 8 EMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV 67
E PI + + V+ + +Y WG NLG G + R +PE + ++ + V
Sbjct: 169 EEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKV-TVDGDKMAMV 227
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD 127
H++ VS G +++ G G+ G+LG G + P+K+ DK ++ S
Sbjct: 228 ACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVPRKVQALSDKF---ISQVSGGWR 284
Query: 128 HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV 187
HS+ L SG + G N F Q+G+ ++ +P+ + + Q + + CG H++
Sbjct: 285 HSMALTSSGQLLGWGWNKFGQIGVG---NNFDCCSPM-QVNFPHDQKVQMISCGWRHTIA 340
Query: 188 YSSRE-VYTFGIHA-GQLGH 205
+ RE VY++G A GQLG+
Sbjct: 341 VTERENVYSWGRGANGQLGN 360
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 23/191 (12%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HSV + V S G G+ G+LG G + P KL+ +D + V + DH++
Sbjct: 25 HSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGA---DHTMAR 81
Query: 133 MLSG-SVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI--GVCCGRFHSV-VY 188
SG V+ G F +LG S ++ P PI K+ Q L+ + CG H + V
Sbjct: 82 SESGRDVYSWGWGDFGRLGHG-DHSDLLIPHPI-----KALQGLMIQQIACGDSHCLAVT 135
Query: 189 SSREVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAE 247
+V ++G + G+LG + + S++ K+Q I E++P I G +HS A
Sbjct: 136 MDSQVLSWGRNQNGELG---LGTAEDSLLPQKIQ---IFEEIP--IKMVAAGAEHS-VAI 186
Query: 248 TSLGPEFGGGW 258
T G +G GW
Sbjct: 187 TKDGNLYGWGW 197
>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 407
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG G+ R+ P SL +I + +HS+ DG +W+ G Q
Sbjct: 179 VWTWGRNIYGQLGDGTTTDRNTPVQTRSLN--TIISIAGGGYHSLAQKADGTIWTWGLNQ 236
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ ++ P +N KD V+M DHS+ L +G++++ G N QLG
Sbjct: 237 YGQLGDGTITNRTIPVLVNGIKD-----VSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLG 291
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH--- 205
+ TP+P LK+ ++ + G HS++ S V+T+G + GQLG
Sbjct: 292 DRSTDNR---STPVPMGDLKN---IMTIDGGGDHSLILKSDGTVWTWGNNENGQLGDGTT 345
Query: 206 ----SPV---TVSSASVIEPKVQATI-IREDLPGFIFESNR 238
+P+ T+S+ + I Q +I ++ D + + SNR
Sbjct: 346 MSRATPIQASTLSNVTAIASGEQHSIALKSDGTIWAWGSNR 386
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V WG N + LG G+ R +P + L ++ + +HSV ++ DG VW+ G
Sbjct: 79 VLTWGQNMHGQLGDGTNTDRKIPVQVKDLN--NVTAIAGGAWHSVALTSDGTVWTWGSNW 136
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ S P ++N K+ A+AS H++ L G+V+ G N + QLG
Sbjct: 137 AGQLGDGTTKSRNKPVQVNNLKNI----TAIASKGL-HNLALKSDGTVWTWGRNIYGQLG 191
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPV 208
TP+ SL + +I + G +HS+ + ++T+G++ GQLG +
Sbjct: 192 DGTTTDR---NTPVQTRSLNT---IISIAGGGYHSLAQKADGTIWTWGLNQYGQLGDGTI 245
Query: 209 TVSSASVIEPKVQ-ATIIREDLPGFIFESNRGT 240
T + V+ ++ ++IR I N GT
Sbjct: 246 TNRTIPVLVNGIKDVSMIRCGGDHSIVLKNNGT 278
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++IWG N + LG S R P + LK +I + HS+ + DG VW+ G+ +
Sbjct: 279 IWIWGFNQHGQLGDRSTDNRSTPVPMGDLK--NIMTIDGGGDHSLILKSDGTVWTWGNNE 336
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ S +P + + + A+AS Q HS+ L G+++ G N QLG
Sbjct: 337 NGQLGDGTTMSRATPIQASTLSNV----TAIASGEQ-HSIALKSDGTIWAWGSNRNGQLG 391
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N N LG G+ +R P +L +++ + + HS+ + DG +W+ G +
Sbjct: 329 VWTWGNNENGQLGDGTTMSRATPIQASTL--SNVTAIASGEQHSIALKSDGTIWAWGSNR 386
Query: 91 GGRLGLGSESSVVSP 105
G+LG GS S+ +P
Sbjct: 387 NGQLGDGSISNRSTP 401
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 62 ASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAM 121
++I QV FHS+ + DG V + G G+LG G+ + P ++ KD V
Sbjct: 58 STILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQV-----KDLNNVTA 112
Query: 122 ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
+ HSV L G+V+ G N QLG S P+ ++LK+ + +
Sbjct: 113 IAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSR---NKPVQVNNLKN---ITAIASK 166
Query: 182 RFHSVVYSSR-EVYTFGIHA-GQLGHSPVT 209
H++ S V+T+G + GQLG T
Sbjct: 167 GLHNLALKSDGTVWTWGRNIYGQLGDGTTT 196
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
NEVY WG LG G +P+ + +L +I +V H++ V+D G ++S G
Sbjct: 86 NEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFGR 145
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G+LGLG+ S + P+ + + ++ +A +HS+ +G VF G +
Sbjct: 146 NQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGG---EHSLAATSAGDVFAWGWGRYGN 202
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGH 205
LG+ PP + P L+ + + V CG HS+ + VYTFG GQLGH
Sbjct: 203 LGVGPPEDRHL---PSQVHGLEGVK-VTSVACGWRHSIAADETGAVYTFGWSKYGQLGH 257
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 10/210 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+++ +V+ WG NLG G + R +P + L+ + V HS+ + G
Sbjct: 184 LAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGA 243
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
V++ G + G+LG G + PK + KD + + + H+ SG ++ G
Sbjct: 244 VYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSR---IVLIAGGWRHTSAADDSGKLYSWG 300
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHA- 200
N F QLG+ S+ S P+P L +S P+ + CG H+ V + +V+++G
Sbjct: 301 WNKFGQLGIG---SNTDSNAPVPVQGLNTS-PVKLLSCGWRHTFAVTEAGDVFSWGRGVN 356
Query: 201 GQLGHSPVTVSSASV-IEPKVQATIIREDL 229
GQLGH+ ++A V + +I EDL
Sbjct: 357 GQLGHNEPKDTNAPVRLAELSMGSIKLEDL 386
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 34 WGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD-GRVWSCGHGQGG 92
WG + LG G + R P + L +AS VC +SV +S V+S G G G
Sbjct: 38 WGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFG 97
Query: 93 RLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS 152
RLG G + V P+ + ++ + VA H++ + +G +F G N QLGL
Sbjct: 98 RLGHGDCNDVFIPQPIRALAGRNIVKVACGDT---HTLAVTDTGELFSFGRNQNGQLGLG 154
Query: 153 PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHSP 207
I+ P P SL+ Q + + CG HS+ +S +V+ +G G LG P
Sbjct: 155 TTSDAIL---PQPVESLR-GQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGP 207
>gi|357166571|ref|XP_003580754.1| PREDICTED: protein RCC2-like [Brachypodium distachyon]
Length = 547
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 24/191 (12%)
Query: 32 YIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
Y WG N LG G RD+P ++ L + I + + K H+V V+DDG+ +S GH +
Sbjct: 92 YTWGRNEKGQLGHGDTVQRDLPTIVSELSKYKIIKASIGKNHTVVVTDDGKAFSFGHNKY 151
Query: 92 GRLGLGS---ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL--MLSGSVFVCGLNSF 146
G+LG GS E + L E V A D +V+L + S+ GL +
Sbjct: 152 GQLGTGSLRNEIETLPVPCLVTE-------VTAAVCGGDFTVWLSSVEGSSILTAGLPQY 204
Query: 147 HQLGLSPPPSHIV---------SPTPIPRS-SLKSSQPLIGVCCGRFHSV-VYSSREVYT 195
QLG + P P PR+ ++ S + ++ V CG H+V V SS VYT
Sbjct: 205 GQLGHGTDNEYNTKDSSVKLSYDPQPRPRAIAVLSEKTIVKVACGTNHTVAVDSSGFVYT 264
Query: 196 FGIHA-GQLGH 205
+G G+LGH
Sbjct: 265 WGFGGYGRLGH 275
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 42 LGTGSQQTRDVPELLDSLKRASIKQVC--MDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE 99
+G G Q P L L I+ V FH V + DGR ++ G + G+LG G
Sbjct: 48 VGGGIQGNLLSPSRLRPLVGVDIRSVASGCTAFHCVALGADGRCYTWGRNEKGQLGHGDT 107
Query: 100 SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
P ++ + K + ASI ++H+V + G F G N + QLG + I
Sbjct: 108 VQRDLPTIVS---ELSKYKIIKASIGKNHTVVVTDDGKAFSFGHNKYGQLGTGSLRNEIE 164
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE---VYTFGI-HAGQLGH 205
+ P+P ++ VC G F +V SS E + T G+ GQLGH
Sbjct: 165 T-LPVP---CLVTEVTAAVCGGDF-TVWLSSVEGSSILTAGLPQYGQLGH 209
>gi|302510032|ref|XP_003016976.1| BTB domain and ankyrin repeat protein [Arthroderma benhamiae CBS
112371]
gi|291180546|gb|EFE36331.1| BTB domain and ankyrin repeat protein [Arthroderma benhamiae CBS
112371]
Length = 1644
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 46/220 (20%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL------------------DSLKRAS------- 63
+E++ +G+N N +LG G R PE + +SL+ +
Sbjct: 238 DELFTFGSNKNLSLGVGDSDDRQFPERITLPRPEALIHRFYEEKYENSLESETPEEIPFL 297
Query: 64 -------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
++ V M K H+ ++ D ++ CG G GGRLG G E + SP ++
Sbjct: 298 IRSTPLIVQDVVMSKLHTAILTTDPCSNLYMCGFGPGGRLGTGHEGTSFSPVCVDSGAIT 357
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV--SPTPIPRSSLKSS 172
K + ++ DH++ + G VF G N QLG + P + SP +P + L
Sbjct: 358 GKR-ITTVALGLDHTIAISDQGEVFTWGSNKHGQLGYALPKTKPTASSPNDVP-TQLSPR 415
Query: 173 Q--------PLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
Q ++G HS V++S +YTFG + GQLG
Sbjct: 416 QIFNPFKRDRILGAAASSIHSAVFTSSALYTFGRNDGQLG 455
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 25/220 (11%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS--LKRASIKQVCMDKFHSVFVSDD 80
++++ + +Y+ G LGTG + T P +DS + I V + H++ +SD
Sbjct: 318 LTTDPCSNLYMCGFGPGGRLGTGHEGTSFSPVCVDSGAITGKRITTVALGLDHTIAISDQ 377
Query: 81 GRVWSCGHGQGGRLGLG---------SESSV---VSPKKL--NFEKDKDKLGVAMASISQ 126
G V++ G + G+LG S + V +SP+++ F++D+ LG A +SI
Sbjct: 378 GEVFTWGSNKHGQLGYALPKTKPTASSPNDVPTQLSPRQIFNPFKRDR-ILGAAASSI-- 434
Query: 127 DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS--SQPLIGVCC-GRF 183
HS + S +++ G N QLGL + ++ PIPR S S + VC R
Sbjct: 435 -HSA-VFTSSALYTFGRND-GQLGLMDADARSLTSQPIPRKVGASLFSVSISSVCAIERA 491
Query: 184 HSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQAT 223
V+ + EV+ F + P+T S +S I AT
Sbjct: 492 TVVLLENHEVWVFTHYGYSKLIFPLTGSVSSFIRSSFMAT 531
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 20/238 (8%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S +VY WG LG G+ P+ + L IKQ+ H + V+ +G+V
Sbjct: 82 SESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQ 141
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
S G Q G+LGLG+ + P+K+ + + + M + +H+ + G ++ G
Sbjct: 142 SWGRNQNGQLGLGTTEDSLVPQKIQAFQ---GVPIKMVAAGAEHTAAVTEDGELYGWGWG 198
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ LGL +V + SL + ++ V CG H++ V SS +YT+G GQ
Sbjct: 199 RYGNLGLGDRKDRLVP----EKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQ 254
Query: 203 LGHSPVTVSSASVIEPKVQATIIREDLPG-FIFESNRGTKHSFTAETSLGPEFGGGWT 259
LGH + +I +++A L G FI + + G +H+ A TS G +G GW
Sbjct: 255 LGHGDY---ADHLIPHQLEA------LQGSFISQISGGWRHTM-AVTSDGKLYGWGWN 302
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 5/130 (3%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD 80
I VSS+ +Y +G + LG G +P L++L+ + I Q+ H++ V+ D
Sbjct: 236 ISVSSS--GGLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSD 293
Query: 81 GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
G+++ G + G++G+G SP ++ ++ V + S H++ + +VF
Sbjct: 294 GKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQK---VILISCGWRHTLAVTERQNVFS 350
Query: 141 CGLNSFHQLG 150
G + QLG
Sbjct: 351 WGRGTNGQLG 360
>gi|321464956|gb|EFX75960.1| hypothetical protein DAPPUDRAFT_27119 [Daphnia pulex]
Length = 163
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 51/80 (63%), Gaps = 17/80 (21%)
Query: 216 IEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGW------------TGKKG 263
++ + QATI+REDLPGF+F+SNR TKH+FTAETSLGPE W TG G
Sbjct: 56 VDRQQQATILREDLPGFLFQSNRRTKHTFTAETSLGPELATAWAPVHCPGSGGSETGHSG 115
Query: 264 ----KRLR-SKLEAVKQKVR 278
R R S++EA KQKVR
Sbjct: 116 LVSSGRFRSSQVEATKQKVR 135
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG + S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKDFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEEDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG G E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIVHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
sativus]
Length = 481
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 25/244 (10%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y+WG N+N LG G + + V P +DSL IK+ + HS+ V+D G V+S G
Sbjct: 201 ELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWG 260
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE------KDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
G+ GRLG G ES+ + K E K+ + + V + HS + +G+V++
Sbjct: 261 DGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIF 320
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA 200
G + +++ + TP S+L + V CG +H+ V + ++Y++G +
Sbjct: 321 GERATNRVSFGEANK---ATTPSLISTLLDCEE---VACGGYHTCVLTKGGDLYSWGSNE 374
Query: 201 -GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
G LG+ +VS + +V+ + + + + G KH TA S G F GW
Sbjct: 375 NGCLGNGSTSVSH---LPERVEGPFSKSPVS----KVSCGWKH--TAAISGGAIFTWGWG 425
Query: 260 GKKG 263
G G
Sbjct: 426 GSHG 429
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 26/184 (14%)
Query: 33 IWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGG 92
+WG LG G+ ++ P S R +K + H++F+++ GRV++ G G
Sbjct: 101 VWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLNNFG 160
Query: 93 RLGLGSESSV-VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
+LG+ E P ++ K+ + S +HS + G +++ G+NS QLGL
Sbjct: 161 QLGISDEKRFSTEPVEVRIPKEAMHI-----SAGYNHSCVVTADGELYMWGVNSNGQLGL 215
Query: 152 SPPPSHIVS-PTP--------IPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAG 201
+ V PT I R++L S + V EV+++G +G
Sbjct: 216 GKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSI----------AVADGGEVFSWGDGRSG 265
Query: 202 QLGH 205
+LGH
Sbjct: 266 RLGH 269
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSVFVSDDG-RVWSCG 87
++Y WG+N N LG GS +PE ++ ++ + +V H+ +S W G
Sbjct: 366 DLYSWGSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAISGGAIFTWGWG 425
Query: 88 ----------HGQGGRLGLGSESSVVSPKKLNFEKD 113
H GG+LG GS+ V P K++ ++
Sbjct: 426 GSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGEN 461
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG + + + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGR 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGVNTKGQLG--HEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAG 111
Query: 90 QGGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL + E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTIEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIVHVACG---ESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVVAGGAHSFALSLS-GAVFGWG 215
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 25/251 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +V+ WG ++ LG + ++ VP + SL + QV +HS+ +S G
Sbjct: 97 LALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGG 156
Query: 82 RVWSCGHGQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
++S G + G+LGLG + S+ P+ L + G+ A I+ HS L LSG+V
Sbjct: 157 HIFSWGQNRYGQLGLGMTGQSISVPQHL-----QSLQGIPFAQIAAGGAHSFALTLSGAV 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ P +L+ SQ +I + CG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDTNDRCF---PALLKALR-SQRVIYISCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEF 254
GQLGH+ S+ + P+ + E + + + G +H+ FT + F
Sbjct: 268 AGGYGQLGHN----STNHEVNPRK----VFELMGNVVTQIACGRQHTLAFTPSSGKMDSF 319
Query: 255 GGGWTGKKGKR 265
G G G+ G R
Sbjct: 320 GLGGNGQLGTR 330
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 22/229 (9%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P + ++ V + H+ F+ +DG V++CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G VF GL S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIH-AGQLGHSPVT 209
+ I P I SL Q + V CG +HS+ S ++++G + GQLG +
Sbjct: 119 NNFEECIRVPRNI--KSLSDVQ-VAQVACGYWHSLALSKGGHIFSWGQNRYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIF-ESNRGTKHSFTAETSLGPEFGGG 257
++ S+ P+ + L G F + G HSF A T G FG G
Sbjct: 173 MTGQSISVPQH-----LQSLQGIPFAQIAAGGAHSF-ALTLSGAVFGWG 215
>gi|146418375|ref|XP_001485153.1| hypothetical protein PGUG_02882 [Meyerozyma guilliermondii ATCC
6260]
Length = 1429
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 45/242 (18%)
Query: 11 PIDHLIRDRKIDVSSNQF--------NEVYIWGTNANYNLGTGSQ-----------QTRD 51
PI R RK ++ N +++Y+ G+N NY LG G + D
Sbjct: 160 PIIQQFRLRKSNIDFNHIWWDDARGGSDLYMLGSNKNYTLGLGDTSEVANPSKVPFEHFD 219
Query: 52 VPE----LLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG-QGGRLGLGSESSVVSPK 106
P+ + D L R KQV + K +++ ++ D R++S G G + GR GSE+ +P
Sbjct: 220 FPKRGSTIRDRLHRPRFKQVGISKNYTLVLTTDMRLYSSGLGTRRGRSDHGSENHK-NPY 278
Query: 107 KLNFEKDKDK----------LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG------ 150
+ N D +GV +IS +HS+ L + V+ GLN+F QLG
Sbjct: 279 RFNPIVIDDLANGPLASLSIMGVEKFAISDNHSLILANNNCVYAFGLNTFGQLGTSSTIR 338
Query: 151 LSPPPSHIVSPTPIPRSS--LKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG--HS 206
+ PTP+P + ++ +P++G+ SV +S ++ +G++ GQ+G H
Sbjct: 339 SLSSSNEDYEPTPVPVAGDLRRNFEPILGLAVSEVSSVAWSENSLFFWGLNTGQMGIPHD 398
Query: 207 PV 208
P
Sbjct: 399 PT 400
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 20/232 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG LG G+ VP + +L+ I+Q+ H + V+ DG V+S G Q
Sbjct: 79 IYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQ 138
Query: 91 GGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG ++ S+V K L FE + V M + +H+ + G ++ G + L
Sbjct: 139 NGQLGLGDTDDSLVPHKLLAFE----GVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNL 194
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSP 207
GL ++ P +P + + V CG H++ S S ++YT+G GQLGH
Sbjct: 195 GLGDRGDRML-PAEVPAV---GDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGD 250
Query: 208 VTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
A + P A + + I + + G +H+ A T G +G GW
Sbjct: 251 Y----ADHLLPHQVAALAEFN----ITQVSGGWRHT-VALTEAGKLYGWGWN 293
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 9/182 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EVY WG N N LG G VP L + + S+K + H+ V+D G+++ G
Sbjct: 129 GEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGW 188
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ G LGLG + P ++ D+ + M + H++ + SG ++ G + + Q
Sbjct: 189 GRYGNLGLGDRGDRMLPAEVPAVGDEK---MCMVACGWRHTIAVSQSGKLYTYGWSKYGQ 245
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG H++ + +Q V G H+V + + ++Y +G + GQ+G
Sbjct: 246 LGHGDYADHLLPHQVAALAEFNITQ----VSGGWRHTVALTEAGKLYGWGWNKFGQVGSG 301
Query: 207 PV 208
V
Sbjct: 302 DV 303
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++Y WG NLG G + R +P + ++ + V H++ VS G++++ G
Sbjct: 181 GKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGW 240
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LG G + + P ++ + + S H+V L +G ++ G N F Q
Sbjct: 241 SKYGQLGHGDYADHLLPHQVAALAE---FNITQVSGGWRHTVALTEAGKLYGWGWNKFGQ 297
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHS 206
+G H SP I S Q ++ V CG H+V + + VY++G +GQLGH
Sbjct: 298 VGSGDVDDH-TSPQLI--SIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHG 354
Query: 207 PVTVSSA 213
SA
Sbjct: 355 DAVDRSA 361
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
++ +Q ++Y +G + LG G +P + +L +I QV H+V +++ G+
Sbjct: 227 IAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGK 286
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G G SP+ ++ + V S H+V + +V+ G
Sbjct: 287 LYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQR--VVQVSCGWRHTVAVTDKNNVYSWG 344
Query: 143 LNSFHQLG 150
+ QLG
Sbjct: 345 RGTSGQLG 352
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLD-SLKRASIKQVCMDKFHSVFVSDDG 81
V+ + ++Y WG N +G+G P+L+ + + QV H+V V+D
Sbjct: 279 VALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKN 338
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLN 109
V+S G G G+LG G +PK +
Sbjct: 339 NVYSWGRGTSGQLGHGDAVDRSAPKGIQ 366
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 9/190 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQ-TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N++ +++ WG N N LG S T VP ++ L I Q+ HS+ +++DG
Sbjct: 97 LAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDG 156
Query: 82 RVWSCGHGQGGRLGLGSESSV-VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
+++ G + G+LGLGS ++ + PK+++ + +A + H++ + SG+VF
Sbjct: 157 ELYAWGSNREGQLGLGSYTTTEIKPKRIS---TLAAVPIAFIACGGYHTIVISKSGAVFS 213
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-H 199
G N+F QLGL+ + P +L++++ C F + V+T G
Sbjct: 214 WGRNTFGQLGLNDVQQRNL---PCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGM 270
Query: 200 AGQLGHSPVT 209
GQLGH T
Sbjct: 271 YGQLGHGNTT 280
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASI-KQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG N LG Q R++P L +L+ A + C ++F SVF++ DG V++CG G
Sbjct: 211 VFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEF-SVFLTMDGGVFTCGAG 269
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLS-GSVFVCGLNSF 146
G+LG G+ ++ + P+++ + +G + IS + H++ L+ S G V+ GL
Sbjct: 270 MYGQLGHGNTTNEILPRQV-----MELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 324
Query: 147 HQLG 150
QLG
Sbjct: 325 GQLG 328
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++ WG+ + LG G + ++ P +D ++ ++++Q+ + ++V ++ +G+V+SCG+
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG + K+L D + H++ + G +F G N Q
Sbjct: 61 NDYGQLGHEK-----ARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQ 115
Query: 149 LGLSPPPSHIVSPTPIPRS-SLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLGH 205
LGL+ + +PR + + ++ + CG HS+ ++ E+Y +G + GQLG
Sbjct: 116 LGLNS----VDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGL 171
Query: 206 SPVTVSSASVIEPKVQATI 224
T + I+PK +T+
Sbjct: 172 GSYTTTE---IKPKRISTL 187
>gi|313229389|emb|CBY23976.1| unnamed protein product [Oikopleura dioica]
Length = 1060
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
Query: 60 KRASIKQVCMDKFHSVFVSDDGRVWSCG--HGQGGRLGLGSESSVVSPKKLNFEKDKDKL 117
K + KFH + + GRV+S G Q GRLG + +V++PK++ F + +
Sbjct: 133 KNTVVVHASFSKFHGICLDSAGRVYSWGVQSNQKGRLGYAAPPAVLNPKRIVF---PEAV 189
Query: 118 GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS-QPLI 176
++ + S +HSV + +G +V G NS QLGL + SP + + K+ Q
Sbjct: 190 KISYVATSDNHSVLISDNGRAYVFGSNSHGQLGLGGDTQFVESPRCVHVMNRKTKIQNFT 249
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
G FHS + + +VYT G GQLGH
Sbjct: 250 KAAAGIFHSALINGNDVYTCGRDVGQLGH 278
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 31 VYIWGTNANYN--LGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY WG +N LG + P+ + + I V HSV +SD+GR + G
Sbjct: 156 VYSWGVQSNQKGRLGYAAPPAVLNPKRIVFPEAVKISYVATSDNHSVLISDNGRAYVFGS 215
Query: 89 GQGGRLGLGSESSVV-SPKKLNFEKDKDKL-GVAMASISQDHSVFLMLSGSVFVCG 142
G+LGLG ++ V SP+ ++ K K+ A+ HS L+ V+ CG
Sbjct: 216 NSHGQLGLGGDTQFVESPRCVHVMNRKTKIQNFTKAAAGIFHSA-LINGNDVYTCG 270
>gi|146089571|ref|XP_001470417.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070450|emb|CAM68791.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 843
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G Q PE++ ++K + V FH+VF++DDG ++CG Q
Sbjct: 275 VYTWGIGNSGRLGHGDQDDHLSPEVVTAMKGKCVVDVACGSFHTVFIADDGNAYACGDNQ 334
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
GG+ G+ E SV P K+N + V AS + H+ L+ +G V V G
Sbjct: 335 GGQCGVVGEYSVPVPTKMNITGGRK---VIHASCGRMHTTLLLNNGDVVVYG 383
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 13/177 (7%)
Query: 46 SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP 105
S+ VP +DSL +IK + +H VS DG V++ G G GRLG G + +SP
Sbjct: 238 SRVVARVPVRIDSLDGKNIKLLSSGPWHYAAVSADGSVYTWGIGNSGRLGHGDQDDHLSP 297
Query: 106 KKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
+ + K K + VA S H+VF+ G+ + CG N Q G+ S P+P
Sbjct: 298 EVVTAMKGKCVVDVACGSF---HTVFIADDGNAYACGDNQGGQCGVVGEYS-----VPVP 349
Query: 166 -RSSLKSSQPLIGVCCGRFH-SVVYSSREVYTFGIHAG---QLGHSPVTVSSASVIE 217
+ ++ + +I CGR H +++ ++ +V +G G +G+ V +++E
Sbjct: 350 TKMNITGGRKVIHASCGRMHTTLLLNNGDVVVYGTGLGLGVGIGYGMRMVRCQAILE 406
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 44/214 (20%)
Query: 10 RPIDHLIRDRKIDVSSNQF--------NEVYIWGTNANYNLGTG---------------S 46
R I L I VS + +VY WGT +G S
Sbjct: 562 REITWLADKEIIQVSCGSYFALALSASGQVYSWGTIECCGVGLEPDPKVVPAHMIMRNIS 621
Query: 47 QQTRDV---PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVV 103
+TR V P L+DSLK I QV +H + ++ G +++ G G GGRLG G
Sbjct: 622 GETRGVVLSPLLIDSLK--GIIQVAAAGWHGMALNAIGEIYAWGIGTGGRLGTGDCEHYY 679
Query: 104 SPKKLNFEKDKDKLGV-AMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
+P ++ ++G S D + L +V G+N +Q L S +V+PT
Sbjct: 680 TPIRITHGAFFTRIGCGCYTSYGIDDNARL------YVWGVNDKNQ--LDTLGSKVVTPT 731
Query: 163 PIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTF 196
P+ + ++ C G++ S+ + + F
Sbjct: 732 PVLENVREA-------CLGKYFSLALTYNNTFHF 758
>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 417
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 115/246 (46%), Gaps = 29/246 (11%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP--ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y+WG N + LG G + VP ++ LK +IK + HSV +SD G +S G
Sbjct: 137 ELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISDGGAAFSWG 196
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE------KDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
G GRLG G ESSV+ K E KD + + V + +S +G VFV
Sbjct: 197 IGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGCVFVF 256
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA 200
G +L L S P+ I S L SS+ V CG +H+ V + S E+YT+G +
Sbjct: 257 GERGIEKLRLK-EMSDATKPSLI--SELPSSKE---VACGGYHTCVLTNSGELYTWGSNE 310
Query: 201 -GQLGHSPVTVSSASVIE--PKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
G LG + S+ VI KVQ ++ + + + G KH TA S G F G
Sbjct: 311 NGCLG-----IGSSDVIHLPEKVQGPFLKSSVS----QVSCGWKH--TAAISEGRVFTWG 359
Query: 258 WTGKKG 263
W G G
Sbjct: 360 WGGSNG 365
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 33 IWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGG 92
+WG LG G+ ++ P + + + ++ + H++F+++DG V++ G G
Sbjct: 36 LWGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHTLFLTEDGCVYATGLNDFG 95
Query: 93 RLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS 152
+LG+ SES S + L ++ K V S +HS + + G +++ G N+ QLGL
Sbjct: 96 QLGV-SESKHYSVEPLCVFGEEKK--VVQISAGYNHSCAITVDGELYMWGKNTSGQLGLG 152
Query: 153 PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLGH 205
+IV P P LK + G HSV S +++GI +G+LGH
Sbjct: 153 KRAPNIV-PLPTKVEYLKGINIKMAA-LGSEHSVAISDGGAAFSWGIGVSGRLGH 205
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSVFVSDDGRVWS--- 85
E+Y WG+N N LG GS +PE + ++S+ QV H+ +S+ GRV++
Sbjct: 302 ELYTWGSNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAISE-GRVFTWGW 360
Query: 86 ---------CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
GH G+LG GS+ ++P ++ F +D L V+
Sbjct: 361 GGSNGTFSEVGHSSSGQLGHGSDVDYINPTRVCFGEDVKALQVS 404
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY G N LG + V L + + Q+ HS ++ DG ++ G
Sbjct: 86 VYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGYNHSCAITVDGELYMWGKNT 145
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG + + P E K + + MA++ +HSV + G+ F G+ +LG
Sbjct: 146 SGQLGLGKRAPNIVPLPTKVEYLKG-INIKMAALGSEHSVAISDGGAAFSWGIGVSGRLG 204
>gi|134107998|ref|XP_777381.1| hypothetical protein CNBB1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260071|gb|EAL22734.1| hypothetical protein CNBB1820 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1451
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 45/211 (21%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS---------------IKQVCMDKFH 73
++++WG N N+ LGTG Q + P+ ++ L +A +K V M K H
Sbjct: 167 TDLFVWGVNRNFALGTGDQSDKAFPDHINLLTQAQAAGRSDPSQKFSHVGVKDVVMSKLH 226
Query: 74 SVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVF 131
+ ++ + G + CG G GRLG S + + + + ++ QDH++
Sbjct: 227 TGVITSESRGNLSLCGFGANGRLGKSIHSQLALVPMTDLQH-----SIVSIALGQDHTLA 281
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI--------------- 176
L G + G N F QLG +++ P K LI
Sbjct: 282 LTSGGYILSWGYNRFSQLG------YVIEAPEKPAGMGKEGDDLIQVSPKRIVGPLKKEF 335
Query: 177 --GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GR S +++ V+T+G +AG LG+
Sbjct: 336 VRGVAAGRMASACWTADAVWTWGTNAGHLGY 366
>gi|398016943|ref|XP_003861659.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499886|emb|CBZ34960.1| hypothetical protein, conserved [Leishmania donovani]
Length = 843
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G Q PE++ ++K + V FH+VF++DDG ++CG Q
Sbjct: 275 VYTWGIGNSGRLGHGDQDDHLSPEVVTAMKGKCVVDVACGSFHTVFIADDGNAYACGDNQ 334
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
GG+ G+ E SV P K+N + V AS + H+ L+ +G V V G
Sbjct: 335 GGQCGVVGEYSVPVPTKMNITGGRK---VIHASCGRMHTTLLLNNGDVVVYG 383
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 13/177 (7%)
Query: 46 SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP 105
S+ VP +DSL +IK + +H VS DG V++ G G GRLG G + +SP
Sbjct: 238 SRVVARVPVRIDSLDDKNIKLLSSGPWHYAAVSADGSVYTWGIGNSGRLGHGDQDDHLSP 297
Query: 106 KKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
+ + K K + VA S H+VF+ G+ + CG N Q G+ S P+P
Sbjct: 298 EVVTAMKGKCVVDVACGSF---HTVFIADDGNAYACGDNQGGQCGVVGEYS-----VPVP 349
Query: 166 -RSSLKSSQPLIGVCCGRFH-SVVYSSREVYTFGIHAG---QLGHSPVTVSSASVIE 217
+ ++ + +I CGR H +++ ++ +V +G G +G+ V +++E
Sbjct: 350 TKMNITGGRKVIHASCGRMHTTLLLNNGDVVVYGTGLGLGVGIGYGMRMVRCQAILE 406
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 44/214 (20%)
Query: 10 RPIDHLIRDRKIDVSSNQF--------NEVYIWGTNANYNLGTG---------------S 46
R I L I VS + +VY WGT +G S
Sbjct: 562 REITWLADKEIIQVSCGSYFALALSASGQVYSWGTIECCGVGLEPDPKVVPAHMIMRNIS 621
Query: 47 QQTRDV---PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVV 103
+TR V P L+DSLK I QV +H + ++ G +++ G G GGRLG G
Sbjct: 622 GETRGVVLSPLLIDSLK--GIIQVAAGGWHGMALNAIGEIYAWGIGTGGRLGTGDCEHYY 679
Query: 104 SPKKLNFEKDKDKLGV-AMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
+P ++ ++G S D + L +V G+N +Q L S +V+PT
Sbjct: 680 TPIRITHGAFFTRIGCGCYTSYGIDDNARL------YVWGVNDKNQ--LDTLGSKVVTPT 731
Query: 163 PIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTF 196
P+ + ++ C G++ S+ + + F
Sbjct: 732 PVLENVREA-------CLGKYFSLALTHNNTFHF 758
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 15/183 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+Y WG + LGTG+ +R+ P+ + L I Q+ FHS+ +S+DGRV+S G
Sbjct: 105 IYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQN 164
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LGLGS+ +++ K + + + S L +SG+VF G N+ QL
Sbjct: 165 KCGQLGLGSQ--IINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQL 222
Query: 150 GL-SPPPSHIVSPTPIPRSSLKSSQPLIGVC---CGRFHSVVYSSR-EVYTFGIHA-GQL 203
G S P P + +SL++ +GV CG H+ V S VYTFG GQL
Sbjct: 223 GFKSDPMKGTFKPHAV--NSLRN----LGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQL 276
Query: 204 GHS 206
G +
Sbjct: 277 GQN 279
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 10 RPIDHLIRDRKIDVSSNQFN--------EVYIWGTNANYNLGTGSQQ-TRDVPELLDSLK 60
+ I L + I +S F+ V+ WG N LG GSQ + P+L+ SLK
Sbjct: 129 KKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLK 188
Query: 61 RASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE--SSVVSPKKLNFEKDKDKLG 118
+ QV S +S G V++ G G+LG S+ P +N ++ LG
Sbjct: 189 GIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRN---LG 245
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
VA S ++H+ L GSV+ G ++ QLG + + T +P+ + + V
Sbjct: 246 VAYISCGEEHTAVLSKDGSVYTFGDDTHGQLG-----QNSGNQTSVPQKIEDYAGQVSQV 300
Query: 179 CCGRFHSVVY--SSREVYTFG 197
CGR+H+++Y S + +FG
Sbjct: 301 ACGRYHTLLYVFSCNRIVSFG 321
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 79/155 (50%), Gaps = 11/155 (7%)
Query: 54 ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSV-VSPKKLNFEK 112
E + SL+ +I + HSV VSD+G ++S G G G+LG G+ SS +PKK+
Sbjct: 76 EQISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLF 135
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVS-PTPIPRSSLKS 171
+ + ++ + HS+ L G VF G N QLGL S I++ TP SLK
Sbjct: 136 NTKIIQISCGNF---HSLALSEDGRVFSWGQNKCGQLGLG---SQIINQATPQLVKSLKG 189
Query: 172 SQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
PL+ V G S S S V+ +G +AGQLG
Sbjct: 190 I-PLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLG 223
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 31 VYIWGTNA--NYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+Y WG N L G ++ E + +++V + H++++ +DG + SCG
Sbjct: 1 MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQ 60
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG S +S + + + S +HSV + GS++ G S Q
Sbjct: 61 NPYGQLGRKSNNSSIEQI-----SSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQ 115
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLGHS 206
LG S +P I + L +++ +I + CG FHS+ S V+++G + GQLG
Sbjct: 116 LGTGNLSSRNFTPKKI--TGLFNTK-IIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLG 172
Query: 207 PVTVSSAS 214
++ A+
Sbjct: 173 SQIINQAT 180
>gi|444318902|ref|XP_004180108.1| hypothetical protein TBLA_0D00810 [Tetrapisispora blattae CBS 6284]
gi|387513150|emb|CCH60589.1| hypothetical protein TBLA_0D00810 [Tetrapisispora blattae CBS 6284]
Length = 1504
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 34 WGTNANYNLGTGSQQTRDVPELLD--SLKR--------ASIKQVCMDKFHSVFVSDDGRV 83
+G+N NY LGTG++ R LD L R + ++ + ++HS+ V+ D ++
Sbjct: 169 YGSNFNYQLGTGNKDDRQQLFQLDIECLDRQGEFLSQTKTFSRIKLTRYHSIIVTSDNKI 228
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
++CG+ GRLG GS + P L D ++ S S H++ L +GSV+ G
Sbjct: 229 YTCGNNSRGRLGNGSIDT-SQPNYLEI-LDLEESNFQQLSSSDHHTLVLDENGSVYSWGW 286
Query: 144 NSFHQLGLSPP---------PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EV 193
N++ QLG + P++ S P + S Q + + C + HS S +
Sbjct: 287 NAYGQLGYNTGSNKTVKDDFPTNAFSAVP-KKISFLDFQDIKFISCSKIHSCAVSKNGTI 345
Query: 194 YTFGIHAGQLG 204
Y +G++ GQLG
Sbjct: 346 YLWGLNVGQLG 356
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 30/199 (15%)
Query: 15 LIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTR--DVPELLDSLKRASIKQVCMDKF 72
L R I V+S+ N++Y G N+ LG GS T + E+LD L+ ++ +Q+
Sbjct: 214 LTRYHSIIVTSD--NKIYTCGNNSRGRLGNGSIDTSQPNYLEILD-LEESNFQQLSSSDH 270
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGL--GSESSV----------VSPKKLNFEKDKDKLGVA 120
H++ + ++G V+S G G+LG GS +V PKK++F +D +
Sbjct: 271 HTLVLDENGSVYSWGWNAYGQLGYNTGSNKTVKDDFPTNAFSAVPKKISFLDFQD---IK 327
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLG------LSPPPSHIVSPTPIPRSSLKSSQP 174
S S+ HS + +G++++ GLN QLG LSP H+ +P I R+ ++ S P
Sbjct: 328 FISCSKIHSCAVSKNGTIYLWGLN-VGQLGVSKPLHLSPDTEHVGAPGFITRTPVRISLP 386
Query: 175 LIG---VCCGRFHSVVYSS 190
I V C F + + +S
Sbjct: 387 NIKIEQVLCTEFATFIRAS 405
>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 418
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 32/259 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ +G N LGTG+ +P + +L K A + QV HS+ V+DDGRV+S G
Sbjct: 139 VWAFGKNTAGQLGTGNVDGT-IPRKIGALAKEARVAQVACGAEHSLAVADDGRVYSWGSS 197
Query: 90 QGGRLGLGSES-----------SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSV 138
G LG GSE+ + ++P+ + +DK + VA + HS + G++
Sbjct: 198 TDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHM---HSACIDDRGNL 254
Query: 139 FVCGLNSFHQLGLSPPPS-HIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
+ G F+QLGLS PS H +P+P+ SL+ + CG HS+ ++ V ++G
Sbjct: 255 YTWGQGRFNQLGLSAKPSDHETTPSPV--MSLRFVHE---IACGGLHSLANTNAGVVSWG 309
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGG 256
+ G+LGH + ++V +P + L G KHS A + G F
Sbjct: 310 ANQHGELGHGHHSDIKSAVPKPIKMGSRGWSKLAA-------GWKHS--AGIANGKLFAW 360
Query: 257 GWTGKKGKRLRSKLEAVKQ 275
G+ G G K+ + Q
Sbjct: 361 GFGGSMGSYADEKMSSGGQ 379
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 85 SCGHGQGGRLGLGSESSV---VSPKKLNF---EKDKDKLGVAMASISQDHSVFLMLSGSV 138
S G+G GRLG GS SP+ N+ + L V + HSVFL+ G V
Sbjct: 29 SAGNGDHGRLGHGSPDEAHDGWSPRSSNYFHPVEGVSDLDVRAVAAGGAHSVFLVAGGHV 88
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG 197
F CGLN+ QLG S SP P+ ++ ++ V G H++ V V+ FG
Sbjct: 89 FTCGLNADGQLGHSAGLP--FSPEPML---VRLDVEVVSVAAGNGHTLCVDVDGCVWAFG 143
Query: 198 IH-AGQLG 204
+ AGQLG
Sbjct: 144 KNTAGQLG 151
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 10/148 (6%)
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
++ V HSVF+ G V++CG G+LG S SP+ + D + + VA +
Sbjct: 69 VRAVAAGGAHSVFLVAGGHVFTCGLNADGQLGH-SAGLPFSPEPMLVRLDVEVVSVAAGN 127
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
H++ + + G V+ G N+ QLG ++ P +L + V CG
Sbjct: 128 ---GHTLCVDVDGCVWAFGKNTAGQLGT----GNVDGTIPRKIGALAKEARVAQVACGAE 180
Query: 184 HSV-VYSSREVYTFGIHA-GQLGHSPVT 209
HS+ V VY++G G LGH T
Sbjct: 181 HSLAVADDGRVYSWGSSTDGVLGHGSET 208
>gi|407918210|gb|EKG11482.1| BTB/POZ-like protein [Macrophomina phaseolina MS6]
Length = 1733
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 79/154 (51%), Gaps = 21/154 (13%)
Query: 64 IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESS-----VVSPKKLNFEKDKDK 116
I+ V M K H+ ++ D ++ CGHG GGRLG G E++ + L +K
Sbjct: 329 IQDVQMSKLHTAVLTTDPESNLYMCGHGPGGRLGTGDETTRFQFVCIEGGALARKK---- 384
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI---PRS---SLK 170
V ++ Q+HS+ L G +F G N + QLG S P + + P+ PR LK
Sbjct: 385 --VISVALGQNHSLALSDEGEIFSWGNNVYGQLGYSLPKT-LKDEDPVQLLPRQIFGPLK 441
Query: 171 SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ +IGV R HSV +++ +YTFG + GQLG
Sbjct: 442 K-EIVIGVAASRIHSVAHTTTSLYTFGKNEGQLG 474
>gi|157871057|ref|XP_001684078.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127146|emb|CAJ04885.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 843
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G Q PE++ ++K + V FH+VF++DDG ++CG Q
Sbjct: 275 VYTWGIGNSGRLGHGDQDDHLSPEVVTAMKGKRVVDVACGSFHTVFIADDGNAYACGDNQ 334
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
GG+ G+ E SV P K+N + V AS + H+ L+ +G V V G
Sbjct: 335 GGQCGVVGEYSVPVPTKMNITGGRK---VIHASCGRMHTTLLLNNGDVVVYG 383
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 13/177 (7%)
Query: 46 SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP 105
S+ VP +DSL +IK + +H VS DG V++ G G GRLG G + +SP
Sbjct: 238 SRVVARVPVRIDSLDDKNIKLLSSGPWHYAAVSADGSVYTWGIGNSGRLGHGDQDDHLSP 297
Query: 106 KKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
+ + K K + VA S H+VF+ G+ + CG N Q G+ S P+P
Sbjct: 298 EVVTAMKGKRVVDVACGSF---HTVFIADDGNAYACGDNQGGQCGVVGEYS-----VPVP 349
Query: 166 -RSSLKSSQPLIGVCCGRFH-SVVYSSREVYTFGIHAG---QLGHSPVTVSSASVIE 217
+ ++ + +I CGR H +++ ++ +V +G G +G+ V +++E
Sbjct: 350 TKMNITGGRKVIHASCGRMHTTLLLNNGDVVVYGTGLGLGVGIGYGMRMVRCQAILE 406
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 95/232 (40%), Gaps = 47/232 (20%)
Query: 10 RPIDHLIRDRKIDVSSNQF--------NEVYIWGTNANYNLG---------------TGS 46
R I L I VS + +VY WGT +G S
Sbjct: 562 REITWLADKEIIQVSCGSYFALALSASGQVYSWGTIECCGVGLEPDPKVVPTHMIMRNVS 621
Query: 47 QQTRDV---PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVV 103
+TR V P L+DSLK I QV +H + ++ G +++ G G GGRLG G
Sbjct: 622 GETRGVVLSPLLIDSLK--GIIQVAAGGWHGMALNAIGEIYAWGIGTGGRLGTGDCEHYY 679
Query: 104 SPKKLNFEKDKDKLGV-AMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
+P ++ ++G S D + L +V G+N +QL + S +V+PT
Sbjct: 680 TPVRITHGAFFTRIGCGCYTSYGIDDNARL------YVWGVNDKNQLDML--GSKVVTPT 731
Query: 163 PIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSAS 214
P+ + ++ C G++ S+ + + F +G +G + +S S
Sbjct: 732 PVLENVREA-------CLGKYFSLALTHNNTFHF---SGVMGFDSASYASRS 773
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG + LG + + P+ + +L I QV +HS+ +S+DG+V+S G
Sbjct: 94 VFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKN 153
Query: 90 QGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG E S SP+++ + + + +A + HS L LSG+ F G N+ Q
Sbjct: 154 SQGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQ 210
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHS 206
L LS + + P +LKS +I + CG H+ V + +V+TFG ++ GQLG++
Sbjct: 211 LALSGNNTPVQRYKPHSIGALKSLD-VIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYN 269
Query: 207 PVT 209
P
Sbjct: 270 PTA 272
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 62 ASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAM 121
A ++Q + HS+ + DG V SCG G+LG + P + K + L V +
Sbjct: 21 AEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLI---KALETLLVGL 77
Query: 122 ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
S ++HS+ + G VF G S QLG+ I +P I + +I V CG
Sbjct: 78 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKI---KTLTGIKIIQVSCG 134
Query: 182 RFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRG 239
+HS+ S +VY++G ++ GQLG S AS P+ ++ E +P + + G
Sbjct: 135 HYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQAS---PQRVRSL--EGIP--LAQVAAG 187
Query: 240 TKHSFTAETSLGPEFGGG 257
HSF S G FG G
Sbjct: 188 GAHSFALSLS-GTSFGWG 204
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+VY WG N+ LG G + ++ P+ + SL+ + QV HS +S G + G
Sbjct: 146 QVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGS 205
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+L L ++ V K + L V S +H+ L +G VF G NS Q
Sbjct: 206 NNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQ 265
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV--VYSSREVYTFG 197
LG +P P + SQ + CG +H++ VY++ EV +FG
Sbjct: 266 LGYNPTAKK-RGPQQVEGIDGLVSQ----IDCGSYHTLAYVYTTGEVVSFG 311
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 7/160 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ G N LG + + P L+ +L+ + V K HS+ V GRV++ G G
Sbjct: 42 VHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWGAGS 101
Query: 91 GGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG+ + + +PKK+ K + + S HS+ L G V+ G NS QL
Sbjct: 102 EGQLGIEECKEKIFTPKKI---KTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQL 158
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS 189
GL SP + SL+ PL V G HS S
Sbjct: 159 GLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALS 195
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 17/196 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E+Y WG+N+ LG G +V P+L+++L I + +HS+ +S G ++ G
Sbjct: 189 ELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGK 248
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL + P +L ++ + A+ ++ SVFL + G VF CG + Q
Sbjct: 249 NTFGQLGLNDTQNRNLPHQLQTLRNAK---ICYAACGEEFSVFLTVDGGVFTCGAGMYGQ 305
Query: 149 LGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGI-HAGQLG 204
LG + I +PR ++ + + CG+ H+ +V S VY +G+ AGQLG
Sbjct: 306 LGHGSNNNEI-----LPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 360
Query: 205 HSPVTVSSASVIEPKV 220
++ S+ S+ P+V
Sbjct: 361 NN----STRSIPTPQV 372
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 118/243 (48%), Gaps = 21/243 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N++ +++ WG+N+ LG S+ + P ++ +L + I QV H++ ++++G
Sbjct: 129 IAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNG 188
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSV 138
++S G G+LGLG + S V PK +N GV +A I+ HS+ + SG++
Sbjct: 189 ELYSWGSNSEGQLGLGVDIRSEVKPKLIN-----TLAGVPIAFIACGGYHSIAISKSGAI 243
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI 198
F G N+F QLGL+ + + P +L++++ C F + V+T G
Sbjct: 244 FGWGKNTFGQLGLNDTQNRNL---PHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGA 300
Query: 199 -HAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
GQLGH S+ + I P+ + E + + + + G +H+ S G + G
Sbjct: 301 GMYGQLGHG----SNNNEILPRQ----VMELMGSTVTQISCGKRHTLALVPSQGRVYAWG 352
Query: 258 WTG 260
G
Sbjct: 353 LGG 355
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG Q R++P L +L+ A I + SVF++ DG V++CG G
Sbjct: 243 IFGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGM 302
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLS-GSVFVCGLNSFH 147
G+LG GS ++ + P+++ + +G + IS + H++ L+ S G V+ GL
Sbjct: 303 YGQLGHGSNNNEILPRQV-----MELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAG 357
Query: 148 QLGLS-----PPPSHIVSPTPIPR-SSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHA 200
QLG + P P + P P SS+ C +V Y + ++T G H
Sbjct: 358 QLGNNSTRSIPTPQVVHGPWVAPNGSSMMDLDKQFSSC-----TVGYVVKHIFTGGDHC 411
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 30 EVYIWGTNANYNLGTG--SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+++ WG + LG G + VP +D K + I+Q+ + ++V ++ DG+++SCG
Sbjct: 32 DMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSCG 91
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+LG K+L D + H++ + G +F G NS
Sbjct: 92 NNDYGQLGHER-----GRKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEG 146
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
QLGL+ SP + +L +S ++ V CG H++ ++ E+Y++G ++ GQLG
Sbjct: 147 QLGLNSKNFMECSPRMV--KTLGTS-IIVQVACGMKHALALTNNGELYSWGSNSEGQLG- 202
Query: 206 SPVTVSSASVIEPKVQATI 224
+ V S ++PK+ T+
Sbjct: 203 --LGVDIRSEVKPKLINTL 219
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTR---DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
E+Y WG+N LG S + P L +L + + HS +S G V+
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LGL E++ P +L K LGV A+ + SVFL G VF CG ++
Sbjct: 223 GRNNCGQLGLNDETNRAYPTQL---KTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAY 279
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSVVY--SSREVYTFGI-HAGQ 202
QLG S +PR ++ + V CG H++ + S +VY FG+ +GQ
Sbjct: 280 GQLG-----HGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQ 334
Query: 203 LGHSPVTVSSASVIEPKV 220
LG T S+ S++ P+V
Sbjct: 335 LG----TRSTKSLMLPQV 348
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY G+N LG R P+L+ L+ I Q+ HS+ +SD G+V S G
Sbjct: 60 KVYACGSNDYSQLGHDLPTKR--PQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117
Query: 90 QGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG +E +V PK + K + +A + +HS+ L G ++ G N + Q
Sbjct: 118 DCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGN---NHSLALTSCGELYSWGSNIYGQ 174
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
LG++ P P+ ++L PL + CG HS + S S V+ +G + GQLG
Sbjct: 175 LGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG 231
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 82 RVWSCGHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
++ G G+LGLG + +++P+++ + D V S H++FL +G V+
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDT---AVQQVSCGHRHTLFLTATGKVY 62
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
CG N + QLG P P IP +I + CG HS+ S +V ++G
Sbjct: 63 ACGSNDYSQLGHDLPTKR---PQLIPE---LQDYVIIQISCGSRHSLALSDWGQVLSWGD 116
Query: 199 H-AGQLGHSPVTVSSASVIE-PKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGG 256
+ GQLGH+ + +++ PKV +R+ + + + G HS A TS G +
Sbjct: 117 NDCGQLGHA----TEKEIVQLPKV----VRQLVSKTVVQIACGNNHSL-ALTSCGELYSW 167
Query: 257 G 257
G
Sbjct: 168 G 168
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y WG+ ++ LG G + + P + +++QV H++F++ G+V++CG
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACG 65
Query: 88 HGQGGRLG--LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
+LG L ++ + P+ ++ + S HS+ L G V G N
Sbjct: 66 SNDYSQLGHDLPTKRPQLIPELQDYV-------IIQISCGSRHSLALSDWGQVLSWGDND 118
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQL 203
QLG IV + R + S+ ++ + CG HS+ +S E+Y++G + GQL
Sbjct: 119 CGQLG-HATEKEIVQLPKVVRQLV--SKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 175
Query: 204 G-HSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
G +SP ++ + P T++ L G HSF S G FG G
Sbjct: 176 GVNSPNDLTHCNY--PLRLTTLLGIPLAAIAC----GGNHSFLISKS-GAVFGWG 223
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV++ GTN++ LGTG Q+ P +D L I + H V V+ DG V+S G
Sbjct: 40 DEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWG 99
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEK-DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG GS + +SP +++ +K VA S HS+ L G V+ G N+
Sbjct: 100 HNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGS---HHSMVLTCDGEVYAWGYNNS 156
Query: 147 HQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
Q+G S + PIPR +S ++ +IG+ CG+ S+ V + EVY +G + GQ
Sbjct: 157 GQVG-----SGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQ 211
Query: 203 LG 204
LG
Sbjct: 212 LG 213
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EVY WG N + +G+GS + +P + S L+ ++ + + S+ V D+G V++ G+
Sbjct: 147 EVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGY 206
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLGS + +P ++ + V H++ L G ++ G NS+ Q
Sbjct: 207 NGNGQLGLGSSGNQPTPCRI---AALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263
Query: 149 LG 150
LG
Sbjct: 264 LG 265
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG GS + P + +L+ ++QV H++ ++D+G +++ G
Sbjct: 200 EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGAN 259
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDH-SVFLMLSGSVFVCG 142
G+LG G++S+ P ++ +K++ V +A+ H S SG V++ G
Sbjct: 260 SYGQLGTGNKSNQSYPVQVIVDKERI---VEIAACHSSHTSAAKSQSGQVYMWG 310
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML 134
++++ + V+ G G LG G S++ P++++ K V+++ S H V +
Sbjct: 34 LYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRI--VSLSYGSGPHVVIVTS 91
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EV 193
G V+ G N++ QLG + + +SP + + + V CG HS+V + EV
Sbjct: 92 DGEVYSWGHNAYSQLG-NGSTNQALSPCQVSTNLINKKAH--SVACGSHHSMVLTCDGEV 148
Query: 194 YTFGI-HAGQLG 204
Y +G ++GQ+G
Sbjct: 149 YAWGYNNSGQVG 160
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 12/180 (6%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
N +Y WG+ LG G + ++ P LD K +++Q+ + H+V ++ DG V+SC
Sbjct: 26 NNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDGEVFSC 85
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G+ G+LG + K+L D A+ HSV + G +F G N+
Sbjct: 86 GNNDSGQLGHEKPT-----KRLQMIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGSNAD 140
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
QLGL P + ++ TP +L +S ++ + CG+ H++ ++ E+Y +G ++ GQLG
Sbjct: 141 GQLGLGTPLT--IAHTPRMVKALGTS-IVVQIACGKKHTLALTNNGELYAWGSNSDGQLG 197
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 7/185 (3%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQT-RDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
V+ N + +++ WG+NA+ LG G+ T P ++ +L + + Q+ K H++ ++++G
Sbjct: 124 VAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNG 183
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
+++ G G+LGLG + + + KL + +A + HS+ + SG+VF
Sbjct: 184 ELYAWGSNSDGQLGLGQDVKIETRPKLI--TGLATIPIAFIACGGYHSIVVSKSGAVFGW 241
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HA 200
G N+F QLG++ V P +L++++ C F + V+T G
Sbjct: 242 GRNTFGQLGMNDISDKYV---PCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMY 298
Query: 201 GQLGH 205
GQLGH
Sbjct: 299 GQLGH 303
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG + VP LL +L+ A +K V + SVF++ DG V++CG G
Sbjct: 238 VFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGM 297
Query: 91 GGRLGLGSESSVVSPKKL 108
G+LG G+ S+ + P+++
Sbjct: 298 YGQLGHGANSNEILPRQI 315
>gi|154339231|ref|XP_001562307.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062890|emb|CAM39337.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 843
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G Q VP+++ ++K + V FH++FV+DDG ++CG Q
Sbjct: 275 VYTWGVGNSGRLGHGDQDDHLVPKVVTAMKGKRVVDVACGSFHTIFVADDGDAYACGDNQ 334
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
GG+ G+ E SV P K+N + + AS + H+ L+ +G V V G
Sbjct: 335 GGQCGVVGEYSVPVPTKINITGGRKAI---HASCGRLHTTLLLNNGDVVVYG 383
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 13/177 (7%)
Query: 46 SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP 105
S+ VP + SL +IK + +H VS+DG V++ G G GRLG G + + P
Sbjct: 238 SRVVARVPVCISSLDDKNIKLLSSGPWHYAAVSEDGSVYTWGVGNSGRLGHGDQDDHLVP 297
Query: 106 KKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
K + K K + VA S H++F+ G + CG N Q G+ S P+P
Sbjct: 298 KVVTAMKGKRVVDVACGSF---HTIFVADDGDAYACGDNQGGQCGVVGEYS-----VPVP 349
Query: 166 -RSSLKSSQPLIGVCCGRFH-SVVYSSREVYTFGIHAG---QLGHSPVTVSSASVIE 217
+ ++ + I CGR H +++ ++ +V +G G +G+ V +++E
Sbjct: 350 TKINITGGRKAIHASCGRLHTTLLLNNGDVVVYGTGLGLGVGIGYGMRMVRCQAILE 406
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 21/153 (13%)
Query: 46 SQQTRDV---PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSV 102
S +TR V P L+D+LK I V +H + ++ G +++ G G GGRLG G
Sbjct: 621 SGETRGVVLSPLLIDNLK--GIIHVAAGGWHGMALNAIGEIYAWGVGTGGRLGTGDCEHC 678
Query: 103 VSPKKLNFEKDKDKLGV-AMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSP 161
+P ++ ++G S D L +V G+N+ +QLG+ +++P
Sbjct: 679 YTPVRITHGAFFTRIGCGCYTSYGIDDRARL------YVWGVNAKNQLGML--DGKVMTP 730
Query: 162 TPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVY 194
T + + ++ C G+++S+ + +
Sbjct: 731 TLVLENVREA-------CLGKYYSLALTHSNTF 756
>gi|260798953|ref|XP_002594464.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
gi|229279698|gb|EEN50475.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
Length = 1711
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 77/172 (44%), Gaps = 11/172 (6%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N VY WG++ LG G + P L+ LK V ++HS + +GRVW G
Sbjct: 939 NGVYAWGSSTYGQLGLGDWDRQTHPTLVTQLKDVFCVAVATGQYHSAALDGEGRVWMWGW 998
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G+ ++ P + ++ ++ A H+ L SG VF G Q
Sbjct: 999 GVHGQLGQGNAENLNKPHLVAAVQNAVQVSTGYA-----HTAVLTRSGEVFTFGCGLHGQ 1053
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY-SSREVYTFGIH 199
LG IP+ + V CG FH+VV SS++VYTFG H
Sbjct: 1054 LGHGA-----TDKVSIPQRVQGIMGKVAQVACGLFHTVVVTSSQQVYTFGRH 1100
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 88/190 (46%), Gaps = 33/190 (17%)
Query: 31 VYIWGTNANYNLGTGSQQTRD---VPEL---LDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
VY WG LG G Q D VP + S++R + V + H++ + D+G V+
Sbjct: 885 VYTWGKPHQGRLGHG-QLLGDSGYVPPMRVETLSIQRVQVMAVACGQEHTLALCDNG-VY 942
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
+ G G+LGLG P + + KD VA+A+ Q HS L G V++ G
Sbjct: 943 AWGSSTYGQLGLGDWDRQTHPTLVT--QLKDVFCVAVAT-GQYHSAALDGEGRVWMWGWG 999
Query: 145 SFHQLG------LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTF- 196
QLG L+ P H+V+ + Q + V G H+ V + S EV+TF
Sbjct: 1000 VHGQLGQGNAENLNKP--HLVA----------AVQNAVQVSTGYAHTAVLTRSGEVFTFG 1047
Query: 197 -GIHAGQLGH 205
G+H GQLGH
Sbjct: 1048 CGLH-GQLGH 1056
>gi|170089685|ref|XP_001876065.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649325|gb|EDR13567.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1456
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 94/231 (40%), Gaps = 32/231 (13%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPE-----------------LLDSLKRA 62
K S ++ E++ WGTN N LG G R P+ L
Sbjct: 151 KPSASDDKHAELFTWGTNRNAVLGLGDGDDRIYPDQIVIQPQIDAAELQKMGLEARFSPI 210
Query: 63 SIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
+ QV M K H+ V+ + G V CG G GGRLG G + +F +
Sbjct: 211 HVHQVQMSKLHTAVVTSESGGNVRVCGFGSGGRLGPGQHTQYSLKSLPHFTHT-----IV 265
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSH--IVSPTPIPRSSLKSSQPLIGV 178
++ QDH++ L G V GLN F QLG H + TP + + GV
Sbjct: 266 SVALGQDHTLALTKLGEVLSWGLNRFSQLGYVVESRHEEQIQATPKKIYGPLRKEVVRGV 325
Query: 179 CCGRFHSVVYSSREVYTFGIHAGQLGHS----PVTVSSASVIEPKVQATII 225
+ S ++ EV+T+G + GQLG+ PV V +I KV +I
Sbjct: 326 GASKCASACWTEGEVFTWGTNNGQLGYDKAAHPVQVLPKKII--KVNQPVI 374
>gi|302687696|ref|XP_003033528.1| hypothetical protein SCHCODRAFT_256996 [Schizophyllum commune H4-8]
gi|300107222|gb|EFI98625.1| hypothetical protein SCHCODRAFT_256996 [Schizophyllum commune H4-8]
Length = 602
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 45/201 (22%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPE--LLDSLK----------RASIKQVCMDKFHSVFV 77
E++ WG N N LG G+ R PE ++ +L+ A I+ + M K H+ +
Sbjct: 157 ELFTWGINKNAALGLGNGDDRVYPESVVIPALRGVPQDDRRFLPAHIRAIHMSKLHTAVI 216
Query: 78 SDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
+++ + CG G GG +A ++ QDH++ L +S
Sbjct: 217 TNEPASNIRVCGFGSGG-------------------------SIASTALGQDHTLVLTIS 251
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPI---PRSSLKS--SQPLIGVCCGRFHSVVYSS 190
G VF GLN F QLG + + PI PR + + + + G+ + S +++
Sbjct: 252 GEVFSWGLNRFAQLGYVVEVTGPFTQEPIQATPRRIMGALRKETVGGIAAAKTCSACWTA 311
Query: 191 REVYTFGIHAGQLGHS-PVTV 210
EVYT+G ++GQLG+ PV V
Sbjct: 312 EEVYTWGTNSGQLGYDQPVQV 332
>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 447
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V S+Q N V+ +G + +LG G Q + VP+L+ SL+R + + HS+ V++ G
Sbjct: 180 VLSDQGN-VFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESGD 238
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMA---SISQDHSVFLMLSGSVF 139
V+S G G G LG G + PKK+ + + VA S+ L G V
Sbjct: 239 VYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVL 298
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G NS+ QLGL I SP + + + + G HS+V ++ VY+FG+
Sbjct: 299 SFGQNSYGQLGLGHFSRMIASPAQV-----QVEAAAVEIEAGAHHSLVLTNDGRVYSFGL 353
Query: 199 -HAGQLGH 205
GQLGH
Sbjct: 354 AQHGQLGH 361
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 32/263 (12%)
Query: 7 EEMRP--IDHLIRDRKIDVSSNQFNEV----------YIWGTN---ANYNLGTGSQQTRD 51
+++RP ++ L R+R DVS+ ++ + + +G+ + LG G Q+T+
Sbjct: 96 DKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQM 155
Query: 52 VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
+P + SL I +V HS+ +SD G V+S G G G LG G ++ + PK ++
Sbjct: 156 IPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSL 215
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
+ + + +A S HS+ + SG V+ GL S LG +V P I
Sbjct: 216 QREKVVDIAAGSA---HSLVVAESGDVYSFGLGSEGALGHGDTDMSLV-PKKIEHF---V 268
Query: 172 SQPLIGVCCGRFHSVVYSSR-------EVYTFGIHA-GQ--LGHSPVTVSSASVIEPKVQ 221
+P + V G HS+V S V +FG ++ GQ LGH ++S + ++ +
Sbjct: 269 QRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQVEAA 328
Query: 222 ATIIREDLPGFIFESNRGTKHSF 244
A I + +N G +SF
Sbjct: 329 AVEIEAGAHHSLVLTNDGRVYSF 351
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
Query: 43 GTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG-----GRLGLG 97
G G + P+ +++L R ++ V +HS+ + DG + S G+G GRLG G
Sbjct: 90 GHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHG 149
Query: 98 SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSH 157
+ + + P+ + + VA + HS+ L G+VF G+ LG
Sbjct: 150 DQRTQMIPRPVLSLSGVRIVKVAAGA---HHSLVLSDQGNVFSFGVGIDGSLGHGDQARQ 206
Query: 158 IVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHA-GQLGHSPVTVS 211
+V P SSL+ + ++ + G HS VV S +VY+FG+ + G LGH +S
Sbjct: 207 LV---PKLISSLQ-REKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMS 258
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPE--LLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY +G + LG G+ RD PE L+ SL+R I V S+ +S +G V+S G
Sbjct: 348 VYSFGLAQHGQLGHGND-LRDNPEPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFSFGC 406
Query: 89 GQGGRLGLGSESSVVSP 105
G+ GRLG G ES+ P
Sbjct: 407 GKNGRLGKGDESNATQP 423
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 117/250 (46%), Gaps = 23/250 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +++ WG ++ LG + ++ VP + L I QV HS +S G
Sbjct: 97 LALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGG 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
+V+S G Q G+LGLG S +S ++ + G+ A +S HS + LSG+VF
Sbjct: 157 QVFSWGQNQFGQLGLGMHGSSISTPQI----IQSLQGIPFAQLSAGGAHSFAITLSGAVF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ P SL+ SQ +I V CG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDTNDRWF---PALLKSLR-SQRVIYVSCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEFG 255
GQLGH+ S+ I P+ + E + + + + G +H+ FT + FG
Sbjct: 269 GGYGQLGHN----STNHEINPRK----VFELMGNIVTQISCGRQHTLAFTPSSGKMYSFG 320
Query: 256 GGWTGKKGKR 265
G G+ G R
Sbjct: 321 LGGNGQLGTR 330
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 19/125 (15%)
Query: 87 GHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
G+ G+LGLG E V+ P+K F K V H+VFL+ G+V+ CG N
Sbjct: 5 GNASYGQLGLGGIDEEIVIEPRKCEFFHGKK---VCDVGCGLKHTVFLLDDGTVYTCGCN 61
Query: 145 SFHQLGLSPP---PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA 200
QLG P P H+V+ +Q ++ V G H++ + + +++++G+ +
Sbjct: 62 DLGQLGHEKPRKKPEHVVA---------LDAQIIVAVSGGESHTLALNDKGQIFSWGLGS 112
Query: 201 -GQLG 204
GQLG
Sbjct: 113 DGQLG 117
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG R P LL SL+ + V + H+ ++ +G V++ G G
Sbjct: 211 VFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV-FLMLSGSVFVCGLNSFHQL 149
G+LG S + ++P+K+ FE + V S + H++ F SG ++ GL QL
Sbjct: 271 YGQLGHNSTNHEINPRKV-FELMGNI--VTQISCGRQHTLAFTPSSGKMYSFGLGGNGQL 327
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPL 175
G + + SP P+ + S+ P+
Sbjct: 328 G-TRSTCNRKSPAPVKGPFVASAAPI 352
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 93/228 (40%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P + + V H+VF+ DDG V++CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E P+ + D + S + H++ L G +F GL S QLGL
Sbjct: 64 GQ--LGHEKPRKKPEHV---VALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHAGQLGHSPVTV 210
+ + P I S + V CG HS S +V+++G Q G + +
Sbjct: 119 NNFEECVRVPRNI---KCLSDVQIAQVACGYRHSHALSKGGQVFSWG--QNQFGQLGLGM 173
Query: 211 SSASVIEPKVQATIIREDLPGFIF-ESNRGTKHSFTAETSLGPEFGGG 257
+S+ P+ I + L G F + + G HSF S G FG G
Sbjct: 174 HGSSISTPQ-----IIQSLQGIPFAQLSAGGAHSFAITLS-GAVFGWG 215
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EVY WG NA LG G+ +P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 95 EVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGY 154
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ ++K+ V +A Q S+ ++ +G V+V G N Q
Sbjct: 155 NNSGQVGSGSTANQAIPRRVT-SCLQNKIAVNIAC-GQMCSMAVVENGEVYVWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHS 206
LGL + PTP ++L+ + + V CG H++V + ++Y +G ++ GQLG
Sbjct: 213 LGLGNSGNQ---PTPCRIAALQGIR-VQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTG 268
Query: 207 ---------PVTVSSASVIE 217
P+TV VIE
Sbjct: 269 NRSNQSYPVPITVDKDRVIE 288
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
NEV+ GTN + LG G Q P LD+L K C+ H V + +G V++
Sbjct: 41 NEVFALGTNCSGCLGVGDTQNSVEPRRLDTL--CGKKITCLSYGSGPHVVVATAEGEVYT 98
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
GH +LG G+ ++ + P +++ K V + HS+ L G V+ G N+
Sbjct: 99 WGHNAYSQLGNGTTNNSLLPCQISTNLVNKK--VTEVACGSHHSMILTSDGEVYTWGYNN 156
Query: 146 FHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
Q+G S + IPR +S ++ + + CG+ S+ V + EVY +G + G
Sbjct: 157 SGQVG-----SGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNG 211
Query: 202 QLG 204
QLG
Sbjct: 212 QLG 214
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 14/148 (9%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++V+++ V++ G G LG+G + V P++L+ K
Sbjct: 21 IRQACV--FGSAGNEVLYVTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITC 78
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G V+ G N++ QLG + ++ P S+ ++ + V
Sbjct: 79 LSYG--SGPHVVVATAEGEVYTWGHNAYSQLGNGTTNNSLL---PCQISTNLVNKKVTEV 133
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
CG HS++ +S EVYT+G ++GQ+G
Sbjct: 134 ACGSHHSMILTSDGEVYTWGYNNSGQVG 161
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 9/186 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQ-TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N++ +++ WG N LG S T P ++ +L + I Q+ HS+ +++DG
Sbjct: 97 LAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDG 156
Query: 82 RVWSCGHGQGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
++S G + G+LG+GS + + + PK++ + +A + H+V + SG VF
Sbjct: 157 ELYSWGSNREGQLGIGSHTVTEIKPKRI---ITLAAVPIAFIACGGYHTVVISKSGVVFA 213
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-H 199
G N+F QLGL+ IV P +L++++ C F + V+T G
Sbjct: 214 WGRNTFGQLGLNDTQQRIV---PCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGM 270
Query: 200 AGQLGH 205
GQLGH
Sbjct: 271 YGQLGH 276
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++ WG+ + LG G + ++ P +D K ++Q+ + ++V +++DG+V+SCG+
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG + K+L D + H++ + G +F G N Q
Sbjct: 61 NDYGQLGHEK-----ARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQ 115
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLGHS 206
LGL+ TP +L +S ++ + CG HS+ ++ E+Y++G + GQLG
Sbjct: 116 LGLNSVDC--TERTPRMVKALGTS-VIVQIACGIEHSIALTNDGELYSWGSNREGQLGIG 172
Query: 207 PVTVSSASVIEPKVQATI 224
TV+ I+PK T+
Sbjct: 173 SHTVTE---IKPKRIITL 187
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG Q R VP L +L+ A + + SVF++ DG V++CG G
Sbjct: 211 VFAWGRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGM 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLS-GSVFVCGLNSFH 147
G+LG G+ + + P+++ + +G + IS + H++ L+ S G V+ GL
Sbjct: 271 YGQLGHGNGMNEILPRQV-----MELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAG 325
Query: 148 QLG 150
QLG
Sbjct: 326 QLG 328
>gi|378733632|gb|EHY60091.1| hypothetical protein HMPREF1120_08063 [Exophiala dermatitidis
NIH/UT8656]
Length = 1592
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 37 NANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRL 94
N L T S D+P ++ + SI+ V M K H+ ++DD + CG G+GGRL
Sbjct: 297 NEELALNTASLSRSDIPAII-RYRPISIQNVVMSKLHTAVLTDDPISNLHMCGFGRGGRL 355
Query: 95 GLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS-- 152
G G E++ + + + K V+ ++ QDH+V + G V+ G N + QLG S
Sbjct: 356 GTGDENTSFTFQCIQ-TGGLAKRRVSSIALGQDHTVAVCSQGEVYTWGSNLYGQLGYSLP 414
Query: 153 -PPPSHI-VSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
PP+ I + TP + +IG HS +Y+S +YTFG + GQLG
Sbjct: 415 EVPPNEIPMQLTPRQLYGYIKKELVIGAAASAIHSAIYTSSALYTFGKNDGQLG 468
>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
Length = 903
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 92/182 (50%), Gaps = 17/182 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG ++ +P ++ + K I Q+ K HS+ + + G V++ G+G
Sbjct: 229 VYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGKDHSLALDEIGVVYAWGNGS 288
Query: 91 GGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GGRLGLG+ V PK + +FE +K + + Q+ S+ L SG VF G L
Sbjct: 289 GGRLGLGNSEVVSIPKIIPHFEDEK----ITSIACGQEFSLALSDSGKVFSWGKGLHGNL 344
Query: 150 GLSPPPSHIVS---PTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHAG-QLG 204
G S ++S P IP P + CG +HS+V S S +VYTFG + +LG
Sbjct: 345 GYD--VSTMLSQSTPKVIPMLP-----PASQISCGNWHSMVLSKSGDVYTFGSNIDCRLG 397
Query: 205 HS 206
HS
Sbjct: 398 HS 399
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 17/178 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G+ + +P+++ + I + + S+ +SD G+V+S G G
Sbjct: 281 VYAWGNGSGGRLGLGNSEVVSIPKIIPHFEDEKITSIACGQEFSLALSDSGKVFSWGKGL 340
Query: 91 GGRLG--LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G LG + + S +PK + ++ S HS+ L SG V+ G N +
Sbjct: 341 HGNLGYDVSTMLSQSTPKVIPMLPPASQI-----SCGNWHSMVLSKSGDVYTFGSNIDCR 395
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG--IHAGQLG 204
LG S S +PT + + S IG F++V+ S +YT+G IH QLG
Sbjct: 396 LGHSGNGS---TPTMV---QIGSKIKKIGA-GANFNAVLSESNAIYTWGSNIHC-QLG 445
Score = 40.8 bits (94), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 15/151 (9%)
Query: 74 SVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLM 133
+V ++D G V+S G G+LG +++ + P ++ K+K +A +DHS+ L
Sbjct: 220 AVMLTDTGGVYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACG---KDHSLALD 276
Query: 134 LSGSVFVCGLNSFHQLGLSPPPSHIVS-PTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SR 191
G V+ G S +LGL S +VS P IP + + + CG+ S+ S S
Sbjct: 277 EIGVVYAWGNGSGGRLGLG--NSEVVSIPKIIPHF---EDEKITSIACGQEFSLALSDSG 331
Query: 192 EVYTF--GIHAGQLGHSPVTVSSASVIEPKV 220
+V+++ G+H G LG+ T+ S S PKV
Sbjct: 332 KVFSWGKGLH-GNLGYDVSTMLSQST--PKV 359
>gi|300121038|emb|CBK21420.2| unnamed protein product [Blastocystis hominis]
Length = 618
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 18/194 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E+ WG+N+ LG GS P+ + + + + + FH+V + +G V+S G G
Sbjct: 48 EIIAWGSNSYGQLGFGSDVEDSDPQRIPTFQNLPVASIACGGFHNVCICSNGSVYSWGGG 107
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFH 147
G+LG G + + S + L K K GV + S+S Q+HS+FL +G V+ CG +
Sbjct: 108 MYGQLGQGL-NVLSSSQPLQIAKLK---GVDIQSVSCGQNHSLFLGSTGIVYACGNGFYG 163
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS--REVYTFGIH-AGQLG 204
QLGL + P+ SL S + + + CG H + YSS + Y +G + +G+LG
Sbjct: 164 QLGLDVG----IDYRPVCVESL-SDKMITDITCGMLHCIAYSSITGQAYAWGSNDSGELG 218
Query: 205 HSPVTVSSASVIEP 218
+ + +V+EP
Sbjct: 219 IN----AQDNVVEP 228
>gi|255558248|ref|XP_002520151.1| protein with unknown function [Ricinus communis]
gi|223540643|gb|EEF42206.1| protein with unknown function [Ricinus communis]
Length = 387
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 97/208 (46%), Gaps = 16/208 (7%)
Query: 17 RDRKIDVSSNQFNE----VYIWGTNANYNLGTGSQQTRDVPELLD--SLKRASIKQVCMD 70
++K+ V + E V+ WG + LGTG + +P+LL SL I +
Sbjct: 4 ENKKVKVKETEEREHEQQVWSWGAGTDGQLGTGKLEDEHLPQLLQFPSLSVRPISSLACG 63
Query: 71 KFHSVFV-SDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHS 129
H + + S DG+V + G G G+LG G+ S V P+ + F D + S HS
Sbjct: 64 GAHVIALNSGDGKVLTWGRGTSGQLGHGNMLSSVHPQPVTF---LDSFVITHISAGWSHS 120
Query: 130 VFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVY 188
F+ G VF CG SF QLG SH TP+ S +++ + + CG HS V+
Sbjct: 121 GFVSDKGCVFTCGDGSFGQLGHGDNNSH---ATPVQVSYF-ANRHVHQIACGMRHSLVLL 176
Query: 189 SSREVYTFGI-HAGQLGHSPVTVSSASV 215
+VY FG GQLG S + S S+
Sbjct: 177 KGNQVYGFGSGKRGQLGISKDKIKSISL 204
>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Acyrthosiphon pisum]
Length = 893
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y WG+N + +V P L++SL I + +HS VS G V+ G
Sbjct: 177 ELYTWGSNE-FGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWG 235
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LG+ S++S+ SP +L K + V + +D SVFL G VF CG +
Sbjct: 236 KNDFGQLGINSQTSLSSPAQL---KTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYG 292
Query: 148 QLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFH--SVVYSSREVYTFGI-HAGQL 203
QLG + IV PR L+ + V CGR H ++V S VY+FG+ GQL
Sbjct: 293 QLGHGSFSNEIV-----PRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQL 347
Query: 204 G 204
G
Sbjct: 348 G 348
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG SQ + P L +++ +K + + SVF++ DG V++CG G
Sbjct: 231 VFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGM 290
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLG--VAMASISQDHSVFLMLS-GSVFVCGLNSFH 147
G+LG GS S+ + P+K+ + +G V + + H++ L+ S G V+ GL S
Sbjct: 291 YGQLGHGSFSNEIVPRKV-----LELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVG 345
Query: 148 QLGLSPPPSHIVSPTP 163
QLG S I S TP
Sbjct: 346 QLG---TKSSINSNTP 358
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 21/232 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV---PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+Y WG N LG G + + E+++ +IK V H++ V++DG++++CG
Sbjct: 20 MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 79
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LG + KL + L + + + HS+ L G ++ G +S
Sbjct: 80 SNDFGQLGHDGCRT-----KLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCG 134
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHAGQLGHS 206
QLGL P + +S L+ + CG H + ++ E+YT+G + + G
Sbjct: 135 QLGLETDEGIQYKPKIVKT---LASMLLVQISCGYKHCMALTNHGELYTWG--SNEFGQL 189
Query: 207 PVTVSSASVIEPKVQATIIREDLP-GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + +V +P + +++ LP FI G HSF S G FG G
Sbjct: 190 GLGLGPGNVSKPTLVNSLV--GLPISFI---ACGGYHSFVVSKS-GAVFGWG 235
>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Acyrthosiphon pisum]
Length = 1053
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y WG+N + +V P L++SL I + +HS VS G V+ G
Sbjct: 158 ELYTWGSNE-FGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWG 216
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LG+ S++S+ SP +L K + V + +D SVFL G VF CG +
Sbjct: 217 KNDFGQLGINSQTSLSSPAQL---KTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYG 273
Query: 148 QLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFH--SVVYSSREVYTFGI-HAGQL 203
QLG + IV PR L+ + V CGR H ++V S VY+FG+ GQL
Sbjct: 274 QLGHGSFSNEIV-----PRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQL 328
Query: 204 G 204
G
Sbjct: 329 G 329
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG SQ + P L +++ +K + + SVF++ DG V++CG G
Sbjct: 212 VFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGM 271
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLG--VAMASISQDHSVFLMLS-GSVFVCGLNSFH 147
G+LG GS S+ + P+K+ + +G V + + H++ L+ S G V+ GL S
Sbjct: 272 YGQLGHGSFSNEIVPRKV-----LELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVG 326
Query: 148 QLGLSPPPSHIVSPTP 163
QLG S I S TP
Sbjct: 327 QLG---TKSSINSNTP 339
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 21/232 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV---PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+Y WG N LG G + + E+++ +IK V H++ V++DG++++CG
Sbjct: 1 MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACG 60
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LG + KL + L + + + HS+ L G ++ G +S
Sbjct: 61 SNDFGQLGHDGCRT-----KLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCG 115
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHAGQLGHS 206
QLGL P + +S L+ + CG H + ++ E+YT+G + + G
Sbjct: 116 QLGLETDEGIQYKPKIVKT---LASMLLVQISCGYKHCMALTNHGELYTWG--SNEFGQL 170
Query: 207 PVTVSSASVIEPKVQATIIREDLP-GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + +V +P + +++ LP FI G HSF S G FG G
Sbjct: 171 GLGLGPGNVSKPTLVNSLV--GLPISFI---ACGGYHSFVVSKS-GAVFGWG 216
>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
niloticus]
Length = 1536
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 93/178 (52%), Gaps = 12/178 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++++G+N LG GS+ T + P + +LK ++ V + H++ + G+V++ G
Sbjct: 56 KLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHTLICTAKGKVYASGGN 115
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLG-VAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG S K+L+F D G + M + + S L +SG +F+ G N+ Q
Sbjct: 116 SEGQLGLGDCEERTSFKRLDF---FDSQGPIKMLAAGSNTSAALTVSGKLFMWGDNTEGQ 172
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIH-AGQLG 204
+GL S + SP + QP+ V CG +HS +V +YTFG +G+LG
Sbjct: 173 IGLG-KESQVSSP-----QEVSVGQPISWVSCGYYHSALVTVDGALYTFGERDSGKLG 224
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLK-RASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+VY G N+ LG G + R + LD + IK + S ++ G+++ G
Sbjct: 108 KVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKMLAAGSNTSAALTVSGKLFMWGD 167
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++GLG ES V SP++++ + ++ S HS + + G+++ G +
Sbjct: 168 NTEGQIGLGKESQVSSPQEVSVGQP-----ISWVSCGYYHSALVTVDGALYTFGERDSGK 222
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLGH 205
LGL +H + +P+ +P+ V CG H+V + VYTFG+ GQLGH
Sbjct: 223 LGLG---THQLPGHRVPQLVKSIKEPVRQVACGGGHTVALAEGNVYTFGLGQFGQLGH 277
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVA 120
++ C D+ H+ ++++G+++ G G+LGLGS+ +V P K L EK V
Sbjct: 39 LRIACGDE-HTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEK------VQ 91
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
+ + ++H++ G V+ G NS QLGL
Sbjct: 92 LVACGRNHTLICTAKGKVYASGGNSEGQLGL 122
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 12/197 (6%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD 70
PI L + ++++WG N +G G + P+ + + I V
Sbjct: 142 PIKMLAAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQVSSPQEVSVGQ--PISWVSCG 199
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
+HS V+ DG +++ G G+LGLG+ + ++ K V + H+V
Sbjct: 200 YYHSALVTVDGALYTFGERDSGKLGLGTHQ--LPGHRVPQLVKSIKEPVRQVACGGGHTV 257
Query: 131 FLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVY 188
L G+V+ GL F QLG + + +PR K + VC +V+
Sbjct: 258 ALA-EGNVYTFGLGQFGQLGH----GTFIFESRVPRLVEHFKKGRACQVVCGENHTAVIT 312
Query: 189 SSREVYTFGI-HAGQLG 204
+YTFG G+LG
Sbjct: 313 EDGLLYTFGDGRHGKLG 329
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 31 VYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY +G LG G+ ++R VP L++ K+ QV + H+ +++DG +++ G
Sbjct: 264 VYTFGLGQFGQLGHGTFIFESR-VPRLVEHFKKGRACQVVCGENHTAVITEDGLLYTFGD 322
Query: 89 GQGGRLGLGSES 100
G+ G+LGLG E+
Sbjct: 323 GRHGKLGLGEEN 334
>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 388
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V+ WG + LGT Q +P+LL SI + H + ++ DG+V++ G G
Sbjct: 16 QVWSWGAGTDGQLGTAKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSDGKVFTWGRG 75
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G ++ PK ++F D + A+ HS F+ SG +F CG SF QL
Sbjct: 76 SSGQLGHGDILNITLPKLVSF---FDGYVITQAAAGWSHSGFVSDSGCLFTCGNGSFGQL 132
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGHS 206
G S + +P + S S++ + V CG HS V+ + +V FG GQLG +
Sbjct: 133 GHGDNMS-LRTPAKV---SYFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRGQLGFT 187
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 17/195 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N++ LG GS + + P+ L SL Q+ HS +S G V+ G
Sbjct: 160 IFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNT 219
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG P + K L V S ++H+ L L G V G S+ QLG
Sbjct: 220 FGQLGLGDTGDRKYPTHV---KSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLG 276
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY--SSREVYTFGIHA-GQLG--- 204
+ + L+ +Q + CGR H++ Y SS +Y+FG+ GQLG
Sbjct: 277 HNSNNHEALPRKVFELMGLEVTQ----LACGRMHTMAYVESSGRIYSFGLGGNGQLGSKG 332
Query: 205 ----HSPVTVSSASV 215
++P+TV V
Sbjct: 333 TTNCNTPITVDGPFV 347
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY G+N LG R P ++ +L SI+QV +H++ V+D +V+S G+
Sbjct: 55 VYTCGSNDYGQLGQDKGHKR--PTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDD 112
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG E+ + ++ K+ L + + HS+ L G +F G NS QLG
Sbjct: 113 CGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLG 172
Query: 151 L-----SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQL 203
+ P P + S T I P + G HS V S S V+ FG + GQL
Sbjct: 173 IGSTKNQPKPQELTSLTGI---------PFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQL 223
Query: 204 G 204
G
Sbjct: 224 G 224
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 17/130 (13%)
Query: 83 VWSCGHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSV 138
++ G + G LGLG E +++PK+ F K AM +S + H+VF++ G+V
Sbjct: 1 MFCWGAARNGELGLGGIEEDVILAPKEQPFGATK-----AMREVSCGRQHTVFVLAEGTV 55
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
+ CG N + QLG PT I +S Q V CG +H++V + + +V+++G
Sbjct: 56 YTCGSNDYGQLGQDKGHKR---PTVITALDTQSIQQ---VSCGDYHNLVVNDKYQVFSWG 109
Query: 198 I-HAGQLGHS 206
GQLGH+
Sbjct: 110 YDDCGQLGHT 119
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 19/231 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++ WG N LG G + + P+ ++++V + H+VFV +G V++CG
Sbjct: 1 MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG K+ D + S H++ + VF G + Q
Sbjct: 61 NDYGQLGQDK-----GHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQ 115
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHS 206
LG + S P L S Q ++ V CG HS+ S+ ++++G ++ GQLG
Sbjct: 116 LGHTLEAGGNNSRRPRMVKELSSLQ-IVQVACGGKHSLALSNDGRIFSWGNNSHGQLG-- 172
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
++ +PK Q +P + G HSF S G FG G
Sbjct: 173 ----IGSTKNQPKPQELTSLTGIP--FCQIVAGGSHSFVLSKS-GAVFGFG 216
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 11/168 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y +G+N LG G + P + SLK+ + V + H++ + GR++S G G
Sbjct: 57 LYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGS 116
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G SP+ +N + K KL S DHS L G++++ G S QLG
Sbjct: 117 DGQLGTGDAQCATSPQLINLPEQKYKL----LSAGTDHSAALTTDGTLYMWGSGSEGQLG 172
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFG 197
L S + +P LK + V CG +H+ +V ++YTFG
Sbjct: 173 LGNTDS-VETP-----KELKFHSSVSWVSCGYYHTAIVTDDGKLYTFG 214
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y+WG+ + LG G+ + + P+ L +S+ V +H+ V+DDG++++ G +
Sbjct: 160 LYMWGSGSEGQLGLGNTDSVETPKELKF--HSSVSWVSCGYYHTAIVTDDGKLYTFGEKE 217
Query: 91 GGRLGLGSE--SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL + +PK + +K KL + H+ + G+++ G Q
Sbjct: 218 FGKLGLTEDQLEDTTTPKHVESITEKIKL----VACGGAHTAVISDVGNLYTFGDGMHGQ 273
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
LG P + P + R S + V CG H+ V + + +YTFG
Sbjct: 274 LGNGPSLLQLSLPQKVARLSEHKCKY---VSCGDNHTAVITEKGAMYTFG 320
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 18/190 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS---LKRASIKQVCMDKFHSVFVSD 79
V+ + VY WG AN LG G+ +++ +P+ LD SI + +FH++ V
Sbjct: 11 VALTEEGRVYSWGC-ANGALGHGNSKSQLLPKALDRPLIYSMPSITTIACGEFHTLAVGQ 69
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
DG +W+ G Q G+LG G + P+++ E + K+ + A+ Q HS+ L + V+
Sbjct: 70 DGTLWTWGRNQYGQLGHGDCKTHKLPRRV--EALEKKICIKAAAGGQ-HSLVLTEANKVY 126
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVC---CGRFHSV-VYSSREVYT 195
G N F QLGL + +P + R L+ S GVC CG HS+ + S ++Y+
Sbjct: 127 AFGSNVFGQLGLESKVKYSAAPDIVSR--LRRS----GVCHITCGYSHSMALLKSEQLYS 180
Query: 196 FGIH-AGQLG 204
+G + GQLG
Sbjct: 181 WGRNDCGQLG 190
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
++ Q ++ WG N LG G +T +P +++L++ + HS+ +++ +
Sbjct: 65 LAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANK 124
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
V++ G G+LGL ES V + + GV + HS+ L+ S ++ G
Sbjct: 125 VYAFGSNVFGQLGL--ESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWG 182
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS----------RE 192
N QLGL S SP P + K SQ + + CG H++ + S +
Sbjct: 183 RNDCGQLGLGHYRS---SPVPEHLTMFKKSQ-VQQISCGYDHNIAFVSEYAGPGVPPLEK 238
Query: 193 VYTFGI-HAGQLGHSPVTVSSASVIEPKVQATII 225
VYT+G GQLGH + S PKV T++
Sbjct: 239 VYTWGRGEEGQLGHDELY----SRCVPKVVQTLL 268
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
K H+V ++++GRV+S G G LG G+ S + PK L+ + + + H++
Sbjct: 7 KLHTVALTEEGRVYSWGCANGA-LGHGNSKSQLLPKALDRPLIYSMPSITTIACGEFHTL 65
Query: 131 FLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVY 188
+ G+++ G N + QLG +H +PR +L+ + G+ V+
Sbjct: 66 AVGQDGTLWTWGRNQYGQLGHGDCKTH-----KLPRRVEALEKKICIKAAAGGQHSLVLT 120
Query: 189 SSREVYTFGIHA-GQLG-HSPVTVSSASVIEPKVQ 221
+ +VY FG + GQLG S V S+A I +++
Sbjct: 121 EANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLR 155
>gi|403369334|gb|EJY84511.1| hypothetical protein OXYTRI_17643 [Oxytricha trifallax]
Length = 1141
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 26 NQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWS 85
N+ E+Y WG LG G + D P+++ +L+ I + HS+F++++ RV+
Sbjct: 117 NRKGEIYAWGGGFYGALGLGDARMCDKPQIIQALQHERIVDIAAGNRHSLFLAENQRVYG 176
Query: 86 CGHGQGGRLGLG---SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
CG + G+LGLG ++SP+ + + GV + HS+FL S VF G
Sbjct: 177 CGESKAGQLGLGQGNQHDRILSPQSITALSGQ---GVKKVCCGKFHSLFLTHSKEVFSTG 233
Query: 143 LNSFHQLG 150
NSF QLG
Sbjct: 234 GNSFGQLG 241
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 24/197 (12%)
Query: 12 IDHLIRDRKIDVSSNQFNEVYIWGTNANYN----------LGTGSQQTRDV-PELLDSLK 60
I L +R +D+++ + +++ Y LG G+Q R + P+ + +L
Sbjct: 147 IQALQHERIVDIAAGNRHSLFLAENQRVYGCGESKAGQLGLGQGNQHDRILSPQSITALS 206
Query: 61 RASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
+K+VC KFHS+F++ V+S G G+LG G++S++ P+K+ K+ V
Sbjct: 207 GQGVKKVCCGKFHSLFLTHSKEVFSTGGNSFGQLGTGNQSNLYVPEKI-----KNLSKVN 261
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCC 180
S Q +S + +FV G F + L P H P+ ++SQ
Sbjct: 262 QISAWQ-YSAAITEQDELFVWGTGIFGEY-LIPTQQH------FPKDKCQTSQFKSIQIG 313
Query: 181 GRFHSVVYSSREVYTFG 197
G F ++ + Y +G
Sbjct: 314 GSFSVLIDHQNKAYVWG 330
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 63/249 (25%), Positives = 100/249 (40%), Gaps = 68/249 (27%)
Query: 12 IDHLIRDRKIDVSSN-QFNEVYIWGTNANYNLGTGSQQT-RDVPELLDSLKRASIKQVCM 69
++H + D N +F E+Y+WG G +QT +P++ S C
Sbjct: 5 VNHKLNDANSYTEDNAEFTEIYVWGR-------VGLEQTIHHMPKIC-SFNIVINYIACG 56
Query: 70 DKFHSVFVSDD-GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS----- 123
D+ H+ F+++ G V+ G G+LG+G ++ S E +D + VA S
Sbjct: 57 DE-HTAFIAEQVGHVYCMGSNADGKLGIGEKTLKSSNVPCLVEGIQDIVQVACGSQHTMA 115
Query: 124 --------------------------------------------ISQDHSVFLMLSGSVF 139
HS+FL + V+
Sbjct: 116 LNRKGEIYAWGGGFYGALGLGDARMCDKPQIIQALQHERIVDIAAGNRHSLFLAENQRVY 175
Query: 140 VCGLNSFHQLGLSPPPSH--IVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTF 196
CG + QLGL H I+SP I + S Q + VCCG+FHS+ + S+EV++
Sbjct: 176 GCGESKAGQLGLGQGNQHDRILSPQSI---TALSGQGVKKVCCGKFHSLFLTHSKEVFST 232
Query: 197 GIHA-GQLG 204
G ++ GQLG
Sbjct: 233 GGNSFGQLG 241
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 19/182 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG LG G+ +P + LK IKQ+ H + ++ DG V S G Q
Sbjct: 88 VYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQ 147
Query: 91 GGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG V+ P K+ FE + V M + +H+ + SG ++ G + L
Sbjct: 148 NGQLGLGHTEDVLVPNKVAAFE----GIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNL 203
Query: 150 GLSPPPSHI----VSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQL 203
GL + V+ P + +L V CG H++ V +S +YTFG GQL
Sbjct: 204 GLGDRNDRLVPGEVAAVPGEKMNL--------VACGWRHTIAVANSGNLYTFGWSKYGQL 255
Query: 204 GH 205
GH
Sbjct: 256 GH 257
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 9/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG NLG G + R VP + ++ + V H++ V++ G +++ G
Sbjct: 191 KLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWS 250
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G + P ++ K+K + S H+V L G ++ G N F Q+
Sbjct: 251 KYGQLGHGDFEDHLVPHQVQALKNKT---IQAVSGGWRHTVALDEDGELYGWGWNKFGQV 307
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGH 205
G H SP I + ++ + V CG H+V + R VY++G +GQLGH
Sbjct: 308 GCGNTDDH-NSPKLI---TGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGH 361
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ ++ E+Y WG N +G G+ + P+L+ + + +V H+V ++D G
Sbjct: 288 VALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGN 347
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNF 110
V+S G G G+LG G PK++
Sbjct: 348 VYSWGRGTSGQLGHGDAVDRCVPKRIEL 375
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 117/244 (47%), Gaps = 19/244 (7%)
Query: 18 DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFV 77
D I S ++ ++Y WG LG G+ P+ + +L+ IKQ+ H + V
Sbjct: 83 DHTIAYSDDEM-QLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTV 141
Query: 78 SDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS 137
+ +G+V S G Q G+LGLG+ + P+K+ K + + V M + +H+ + G
Sbjct: 142 TFNGQVHSWGRNQNGQLGLGNNQDSLLPQKI---KAFEGVCVKMIAAGAEHTTAITEGGD 198
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTF 196
++ G + LGLS V P SS++ + ++ V CG HSV V SS +YT+
Sbjct: 199 LYGWGWGRYGNLGLSDRDDRSV---PEKVSSVE-GEKMVLVACGWRHSVSVSSSGALYTY 254
Query: 197 GIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFG 255
G GQLGH ++ K++A +D+P I + + G +H+ A G +G
Sbjct: 255 GWSKYGQLGHGDF---QDHLVPRKLEAL---KDVP--ISQISGGWRHTM-AVAEDGKLYG 305
Query: 256 GGWT 259
GW
Sbjct: 306 WGWN 309
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 9/181 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG NLG + R VPE + S++ + V HSV VS G +++ G
Sbjct: 198 DLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWS 257
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G + P+KL KD + ++ S H++ + G ++ G N F Q+
Sbjct: 258 KYGQLGHGDFQDHLVPRKLEALKD---VPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSP 207
G+ H SP + + Q ++ V CG H++ + ++ ++++G A GQLGH
Sbjct: 315 GVEDNVDH-CSPVEV---NFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGE 370
Query: 208 V 208
+
Sbjct: 371 I 371
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
VS + +Y +G + LG G Q VP L++LK I Q+ H++ V++DG+
Sbjct: 243 VSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGK 302
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G+ SP ++NF D+ + + H++ L + ++F G
Sbjct: 303 LYGWGWNKFGQVGVEDNVDHCSPVEVNF---PDEQKIVQVACGWRHTLALTENKNIFSWG 359
Query: 143 LNSFHQLG 150
+ QLG
Sbjct: 360 RGASGQLG 367
>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
caballus]
Length = 988
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG + LGTG + + P+ + +L I QV +HS+ +S+ G+V+S G
Sbjct: 67 VFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKN 126
Query: 90 QGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG E S SP+++ + + + +A + HS L +SG+ F G NS Q
Sbjct: 127 SQGQLGLGKEFPSQDSPQRV---RSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQ 183
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHS 206
L LS + S P +L+ + +I + CG H+ V + +V+TFG ++ GQLGHS
Sbjct: 184 LALSGNNVPVQSYKPRSIGALR-NLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHS 242
Query: 207 P 207
P
Sbjct: 243 P 243
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 11/193 (5%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V+ WG N+ LG G + ++D P+ + SL+ + QV HS +S G + G+
Sbjct: 119 QVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGN 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+L L + V K LGV S +H+ L +G VF G NS Q
Sbjct: 179 NSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQ 238
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPV 208
LG S P + P + R SQ + CG +H++ Y VYT G G P
Sbjct: 239 LGHS-PSAQDRGPQLVERIDGLVSQ----IDCGSYHTLAY----VYTTG-QVVSFGRGPS 288
Query: 209 TVSSASVIEPKVQ 221
SS++ E +++
Sbjct: 289 CRSSSTHPEAQIE 301
>gi|221056484|ref|XP_002259380.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809451|emb|CAQ40153.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 432
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 27/222 (12%)
Query: 21 IDVSSNQFNEVYIWGTNANY-----NLGTGSQQTRDVPELLDSLKR--ASIKQVCMDKFH 73
+DV++N +Y WG N+ LG G++Q P+ +++ K + +C H
Sbjct: 151 VDVNNN----LYSWGWGGNFFKGANGLGHGNKQNLSTPKKVETFKSDDSEFVNICCGDQH 206
Query: 74 SVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLM 133
S+ ++ +G+V++CG G+ GRLG G+ + ++++F + + + IS HS
Sbjct: 207 SLVLTKNGKVYACGRGEFGRLGKGNHGDQLFFEEIDFFISNN---IIVKEISCGHSFSAA 263
Query: 134 LS--GSVFVCGLNSFHQLGLSPP----PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV 187
LS G V+V G N + QLG+ SH V P + +++ + + CG H +
Sbjct: 264 LSTHGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFDMENIKIKF-IACGDNHMIA 322
Query: 188 YSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
S V F L +T+S P Q +II++++
Sbjct: 323 CSENNVIFFWGSRAWLEPKAITLS------PLYQNSIIKKNI 358
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 117/244 (47%), Gaps = 19/244 (7%)
Query: 18 DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFV 77
D I S ++ ++Y WG LG G+ P+ + +L+ IKQ+ H + V
Sbjct: 83 DHTIAYSDDEM-QLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTV 141
Query: 78 SDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS 137
+ +G+V S G Q G+LGLG+ + P+K+ K + + V M + +H+ + G
Sbjct: 142 TFNGQVHSWGRNQNGQLGLGNNQDSLLPQKI---KAFEGVCVKMIAAGAEHTTAITEGGD 198
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTF 196
++ G + LGLS V P SS++ + ++ V CG HSV V SS +YT+
Sbjct: 199 LYGWGWGRYGNLGLSDRDDRSV---PEKVSSVE-GEKMVLVACGWRHSVSVSSSGALYTY 254
Query: 197 GIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFG 255
G GQLGH ++ K++A +D+P I + + G +H+ A G +G
Sbjct: 255 GWSKYGQLGHGDF---QDHLVPRKLEAL---KDVP--ISQISGGWRHTM-AVAEDGKLYG 305
Query: 256 GGWT 259
GW
Sbjct: 306 WGWN 309
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 9/181 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG NLG + R VPE + S++ + V HSV VS G +++ G
Sbjct: 198 DLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWS 257
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G + P+KL KD + ++ S H++ + G ++ G N F Q+
Sbjct: 258 KYGQLGHGDFQDHLVPRKLEALKD---VPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSP 207
G+ H SP + + Q ++ V CG H++ + ++ ++++G A GQLGH
Sbjct: 315 GVEDNVDH-CSPVEV---NFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGE 370
Query: 208 V 208
+
Sbjct: 371 I 371
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
VS + +Y +G + LG G Q VP L++LK I Q+ H++ V++DG+
Sbjct: 243 VSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGK 302
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G+ SP ++NF D+ + + H++ L + ++F G
Sbjct: 303 LYGWGWNKFGQVGVEDNVDHCSPVEVNF---PDEQKIVQVACGWRHTLALTENKNIFSWG 359
Query: 143 LNSFHQLG 150
+ QLG
Sbjct: 360 RGASGQLG 367
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 18/243 (7%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVP---ELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
Q + VY+WG N LG +P E+L LK I F VS +G++
Sbjct: 3252 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLF---VVSQEGKL 3308
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
++CG G GRLGLG +S+V PK + F VA+ S + H++ L G +F G
Sbjct: 3309 YACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGK-HALALTQDGKIFSWGE 3367
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAG 201
+LG + + P SLKS + + + CG HS + SS E+YT+G+ G
Sbjct: 3368 GEDGKLGHG---NSVSLDKPRLIESLKSKR-IRDIACGSGHSAAITSSGELYTWGLGEYG 3423
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGK 261
+LGH +A+ ++PK+ +++ + + S + TA+ S+ +G G GK
Sbjct: 3424 RLGHG----DTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY-SWGDGDFGK 3478
Query: 262 KGK 264
G+
Sbjct: 3479 LGR 3481
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 5/180 (2%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
Q + VY WG LG G + D P+L+++L +I + +S +S +G +++
Sbjct: 514 QDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTW 573
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G GRLG G+ +V+ P + + VA S ++ + SG VF G ++
Sbjct: 574 GRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGS-GDSQTLCVTASGIVFSWGDGNY 632
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAG-QLGH 205
+LG S TP L C G+F + + + EVYT+G G +LGH
Sbjct: 633 GKLGRGGCDG---SKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGH 689
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 22/197 (11%)
Query: 8 EMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV 67
+++PI H+ K +Q ++Y G N LG G P+L+ L + IK+V
Sbjct: 3286 KLKPI-HIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKV 3344
Query: 68 CMDK--FHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS 125
+ H++ ++ DG+++S G G+ G+LG G+ S+ P+ + K K +A S
Sbjct: 3345 AVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGS-- 3402
Query: 126 QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS--SQPLIGVCCGRF 183
HS + SG ++ GL + +LG H + T + ++S Q +I V CG
Sbjct: 3403 -GHSAAITSSGELYTWGLGEYGRLG------HGDTATQMKPKLVQSLVGQRVIQVACG-- 3453
Query: 184 HSVVYSSREVYTFGIHA 200
SR+ T + A
Sbjct: 3454 ------SRDAQTMALTA 3464
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 57/227 (25%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G++ D P+L++ L I + HS ++ G +++ G G+
Sbjct: 4367 VYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4426
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS-------ISQDHSVF------------ 131
GRLG G ++PK + +D + VA S ++ D +V+
Sbjct: 4427 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4486
Query: 132 --------------------------------LMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
L SG+++ G +H+LG H+
Sbjct: 4487 GGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLG-HGTDDHVR 4545
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
P + ++L+ + +I + G H V + + EV+T+G + GQLG
Sbjct: 4546 RPRKV--AALQGKK-IISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4589
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+ EVY WG Y LG G+++ P++++ LK +K++C+ FH + +++D V+ G
Sbjct: 673 YGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWG 732
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
G++ + V P K+ +G+A
Sbjct: 733 RNDYGQIDPALGTIVPEPTLCPTLSGKNIIGLA 765
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 7/160 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG LG G P+++D L ++ +V S ++ G V++ G G+
Sbjct: 624 VFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGE 683
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G RLG G+E + PK + K K V + H + L V+ G N + Q+
Sbjct: 684 GYRLGHGNEEHIRYPKVIEVLKPKK---VKELCVGNFHVLALTEDQLVYGWGRNDYGQID 740
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
P + P P +L S + +IG+ CG S + +
Sbjct: 741 ---PALGTIVPEPTLCPTL-SGKNIIGLACGLTQSFAWCT 776
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 17/193 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
VY WG LG G P L+D L + Q+ C +F S+ ++ G VW+ G G
Sbjct: 3468 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQF-SLALTKYGEVWTWGKG 3526
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
RLG G++ V P + + K + VA+ ++ H + + +G V+ G N Q
Sbjct: 3527 DYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGAL---HCLAVTDTGQVYAWGDNDHGQQ 3583
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY--------SSREVYTFGIHAG 201
G S IV+ P L ++ + V CG HS+ + ++ E F
Sbjct: 3584 GNG---STIVNKKPSLVHELDDAR-VNRVSCGSSHSIAWVLTDQPATNNHEPVMFPTEKD 3639
Query: 202 QLGHSPVTVSSAS 214
LG +T+ SA+
Sbjct: 3640 PLGQISLTIPSAN 3652
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 7/177 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG N LG +P L +SL Q+ + + V+ DG+V++ G+G
Sbjct: 4261 IYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGA 4320
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG+G SV+ P L + VA+ S + H + L G V+ G +LG
Sbjct: 4321 AGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGK-HCLALSSEGHVYSWGEGDDGKLG 4379
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGH 205
+ ++ P L ++ ++ + CG HS + S+ +YT+G G+LGH
Sbjct: 4380 HG---NRLMYDRPKLIEELLGTE-IVDIACGGHHSAAITSAGWLYTWGKGRYGRLGH 4432
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCG 87
+ V+ WG LG G +P ++SL + +V C +F SV ++ G +++ G
Sbjct: 4471 DNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQF-SVALTRSGAIYTWG 4529
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G RLG G++ V P+K+ + K + +A S+ H V G VF G N
Sbjct: 4530 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSL---HCVACTDKGEVFTWGDNDEG 4586
Query: 148 QLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVYSS 190
QLG S PR +L+ + + V CG H++ +S+
Sbjct: 4587 QLG-----DGTTSALQRPRLVHALQGKK-ITRVACGSAHTLAWST 4625
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDK--FHSVFVSDDGRVWSCG 87
+VY G A LG G + VP LL+S++ +K+V ++ H + +S +G V+S G
Sbjct: 4312 KVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWG 4371
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNS 145
G G+LG G+ PK + ++ LG + I+ HS + +G ++ G
Sbjct: 4372 EGDDGKLGHGNRLMYDRPKLI-----EELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4426
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
+ +LG + TP +L+ + +I V CG
Sbjct: 4427 YGRLGHGDSEDQL---TPKLVEALQDYK-VIDVACG 4458
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ ++ ++ EV+ WG + LG G+ P L++ L+ + V + H + V+D
Sbjct: 3509 QFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTD 3568
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
G+V++ G G+ G G S + KK + + D V S HS+ +L+
Sbjct: 3569 TGQVYAWGDNDHGQQGNG---STIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3621
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ V+ + +Y WG + LG G+ P + +L+ I + H V +D
Sbjct: 4514 QFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTD 4573
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
G V++ G G+LG G+ S++ P+ ++ + K VA S
Sbjct: 4574 KGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGS 4617
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHS 129
D H + ++ D V+S G+G GGRLG G PK + DK+ +A S +S
Sbjct: 505 DGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGST---YS 561
Query: 130 VFLMLSGSVFVCGLNSFHQLG 150
L +G ++ G ++ +LG
Sbjct: 562 AVLSSNGELYTWGRGNYGRLG 582
>gi|169834794|ref|YP_001715911.1| hypothetical protein CLK_A0284 [Clostridium botulinum A3 str. Loch
Maree]
gi|169408901|gb|ACA57311.1| hypothetical protein CLK_A0284 [Clostridium botulinum A3 str. Loch
Maree]
Length = 1582
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 16 IRDRKIDVSSNQF---NEVYIW--GTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD 70
I+D +I SS +F N+ +W G+N N LG GS T++ ++ ++K+V
Sbjct: 65 IKDIEIGGSSTEFLIKNDGTVWASGSNNNGQLGVGS--TKETITDFTKVQITNVKKVYAK 122
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
++VF+ +DG VW+CG G+LG+G+ + + P K++ + K+ + +A +
Sbjct: 123 SEYTVFLKNDGTVWTCGRNYYGQLGVGNYGNQIVPTKVDIDNVKE---IVLAESDGAATF 179
Query: 131 FLMLSGSVFVCGLNSFHQLGL 151
F+ +V+ CG N F QLG+
Sbjct: 180 FIKNDNTVWCCGSNEFQQLGI 200
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 28/158 (17%)
Query: 76 FVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
+ +DG VW+ G G+LG+GS ++ +F K + V +++VFL
Sbjct: 78 LIKNDGTVWASGSNNNGQLGVGSTKETIT----DFTKVQIT-NVKKVYAKSEYTVFLKND 132
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS--------------SQPLIGVCCG 181
G+V+ CG N + QLG+ + IV PT + ++K CCG
Sbjct: 133 GTVWTCGRNYYGQLGVGNYGNQIV-PTKVDIDNVKEIVLAESDGAATFFIKNDNTVWCCG 191
Query: 182 RFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPK 219
S E GI +G ++P V V E K
Sbjct: 192 --------SNEFQQLGIGSGNKKNTPTEVLINDVKEMK 221
Score = 43.5 bits (101), Expect = 0.094, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 29 NEVYIWGTNANY--NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
N+ +W NY LG G+ + VP +D I D + F+ +D VW C
Sbjct: 131 NDGTVWTCGRNYYGQLGVGNYGNQIVPTKVDIDNVKEIVLAESDGAATFFIKNDNTVWCC 190
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G + +LG+GS + +P ++ K+ M S + + FL G+V+ GLN+
Sbjct: 191 GSNEFQQLGIGSGNKKNTPTEVLINDVKE-----MKS-DRYRTYFLKNDGTVWFAGLNN 243
>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
davidii]
Length = 1369
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 12 IDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMD 70
+ H+ R + S + +VY G N LG G + R+ L++ + KQ+
Sbjct: 83 VKHVACGRNHTLVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAG 142
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
S +++DG+++ G G++GL + +V P ++ K +A S HS
Sbjct: 143 SNTSAALTEDGKLFMWGENSEGQIGLNNVCNVYFPHEVTVGKP-----IAWISCGYYHSA 197
Query: 131 FLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
F+ + G ++ G F +LGL P ++ +P+ + +I V CG H+VV +
Sbjct: 198 FVTMEGELYTFGEPEFGKLGL---PKQLLMNHKVPQLVPGIPEKVIQVACGGGHTVVLTE 254
Query: 191 REVYTFGIHAGQLGHSPVTVSSASVIEPKVQATI 224
+ VY FG+ GQ G + EPK+ ++
Sbjct: 255 KAVYNFGL--GQFGQLGLGTFVFETTEPKIMESV 286
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 42 LGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSES 100
LGT +T + P++++S+K I + + H+ ++D GR+++ G G+ G+LGLG E+
Sbjct: 270 LGTFVFETTE-PKIMESVKDHKITYISCGENHTALITDIGRMYTFGDGRYGKLGLGMEN 327
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 67 VCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMAS 123
C D+ H+ ++ + +++ G G+LGLGS+S+V P K L EK V +
Sbjct: 35 ACGDE-HTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPTCVKALKPEK------VKHVA 87
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G V+ G N+ QLGL
Sbjct: 88 CGRNHTLVSTEGGKVYAVGGNNEGQLGL 115
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 30 EVYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y +G LG Q VP+L+ + I+ C H+V +++ V++ G
Sbjct: 204 ELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPEKVIQVACGGG-HTVVLTEKA-VYNFG 261
Query: 88 HGQGGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
GQ G+LGLG+ PK + KD + S ++H+ + G ++ G +
Sbjct: 262 LGQFGQLGLGTFVFETTEPKIMESVKDHK---ITYISCGENHTALITDIGRMYTFGDGRY 318
Query: 147 HQLGLSPPP-SHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
+LGL ++ PT P + L+ L V CG H VV+++ I G++
Sbjct: 319 GKLGLGMENFTNQFVPTLCP-NFLRFKVHL--VACGGCHMVVFATPRPVIEKIELGKIRD 375
Query: 206 SPVTVSSASVI 216
S + +++ I
Sbjct: 376 SRIPAAASLSI 386
>gi|389583915|dbj|GAB66649.1| hypothetical protein PCYB_094330, partial [Plasmodium cynomolgi
strain B]
Length = 371
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 23/214 (10%)
Query: 29 NEVYIWGTNANY-----NLGTGSQQTRDVPELLDSLKR--ASIKQVCMDKFHSVFVSDDG 81
N +Y WG N+ LG G++Q P+ ++S K + +C HS+ ++ +G
Sbjct: 94 NNLYSWGWGGNFFKGANGLGHGNKQNLSTPKKVESFKSDDSEFVNICCGDQHSLVLTKNG 153
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS--GSVF 139
+V+ CG G+ GRLG G+ + ++++F + + + IS HS LS G V+
Sbjct: 154 KVYGCGRGEFGRLGKGNHGDQLFFEEIDFFISNN---ITVKGISCGHSFSAALSTDGEVY 210
Query: 140 VCGLNSFHQLGLSPP----PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYT 195
V G N + QLG+ SH V P + +++ + + CG H + S V
Sbjct: 211 VWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFDMENIKIKF-IACGDNHMIACSENNVIF 269
Query: 196 FGIHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
F L +T+S P Q +II++++
Sbjct: 270 FWGSRAWLEPKAITLS------PLYQNSIIKKNI 297
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 17/196 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E+Y WG+N+ LG G ++ P+L+++L I + +HS+ +S G ++ G
Sbjct: 205 ELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGK 264
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL + P +L ++ V A+ ++ SVFL + G VF CG + Q
Sbjct: 265 NTFGQLGLNDTQNRNLPYQLQTLRNAK---VCYAACGEEFSVFLTVDGGVFTCGAGMYGQ 321
Query: 149 LGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGI-HAGQLG 204
LG + I +PR ++ + + CG+ H+ +V S VY +G+ AGQLG
Sbjct: 322 LGHGSNNNEI-----LPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 376
Query: 205 HSPVTVSSASVIEPKV 220
++ S+ S P+V
Sbjct: 377 NN----STRSTTTPQV 388
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 21/243 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N++ +++ WG+N+ LG S+ + P ++ +L + I Q+ H++ ++++G
Sbjct: 145 IAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNG 204
Query: 82 RVWSCGHGQGGRLGLGSESSV-VSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSV 138
++S G G+LGLG + + PK +N GV +A I+ HS+ + SG++
Sbjct: 205 ELYSWGSNSEGQLGLGVDIRCEMKPKLIN-----TLAGVPIAFIACGGYHSIAISKSGAI 259
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI 198
F G N+F QLGL+ + + P +L++++ C F + V+T G
Sbjct: 260 FGWGKNTFGQLGLNDTQNRNL---PYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGA 316
Query: 199 -HAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
GQLGH S+ + I P+ + E + + + + G +H+ S G + G
Sbjct: 317 GMYGQLGHG----SNNNEILPRQ----VMELMGSTVTQISCGKRHTLALVPSQGRVYAWG 368
Query: 258 WTG 260
G
Sbjct: 369 LGG 371
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 30 EVYIWGTNANYNLGTG--SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+++ WG + LG G + VP +D K + I+Q+ + ++V ++ DG+++SCG
Sbjct: 48 DMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGKIYSCG 107
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+LG K+L D A+ H++ + G +F G NS
Sbjct: 108 NNDYGQLGHEQ-----GRKRLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGSNSEG 162
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
QLGL+ SP + +L +S ++ + CG H++ ++ E+Y++G ++ GQLG
Sbjct: 163 QLGLNSKNFMECSPRMV--KTLGTS-IIVQIACGMKHALALTNNGELYSWGSNSEGQLG- 218
Query: 206 SPVTVSSASVIEPKVQATI 224
+ V ++PK+ T+
Sbjct: 219 --LGVDIRCEMKPKLINTL 235
>gi|398399198|ref|XP_003853056.1| hypothetical protein MYCGRDRAFT_109184 [Zymoseptoria tritici
IPO323]
gi|339472938|gb|EGP88032.1| hypothetical protein MYCGRDRAFT_109184 [Zymoseptoria tritici
IPO323]
Length = 1685
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 64 IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLG-- 118
I+ V M K HS ++ D +++CGHG+GGRLG G E + + N+E + L
Sbjct: 429 IRDVYMSKLHSAVITTDPESNLYTCGHGKGGRLGTGDERT-----RFNYECIEGGSLAGK 483
Query: 119 -VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI---PRSSLK--SS 172
VA ++ Q+H++ L G + G N + QLG P + PI PR
Sbjct: 484 RVATVALGQNHTLALTEHGEIHSWGNNGYGQLGYGLPRTS-ADEEPIGLVPRQIFGPLKR 542
Query: 173 QPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ +IG+ R HSV ++S +Y G + GQLG
Sbjct: 543 ETVIGIAASRVHSVAHTSSSLYVMGKNDGQLG 574
>gi|325096107|gb|EGC49417.1| BTB domain and ankyrin repeat protein [Ajellomyces capsulatus H88]
Length = 1674
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 52/227 (22%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPE-------------------LLDSLKRAS------ 63
+EV+ +G+N N NLG G + R PE ++ + +R S
Sbjct: 247 DEVFTFGSNKNLNLGLGDEDDRQFPERIGLTRPDHLLYTFNRDHRVVRAARRGSDPHAEE 306
Query: 64 -------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSV 102
+Q+ M K H+ ++DD ++ CG G GGRLG G + +
Sbjct: 307 SDIHSVNDIPTLVRARPIIYRQIVMSKLHTGIITDDPESNLFMCGFGPGGRLGTGDQGTR 366
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
S + K V++A + QDHS+ + G VF G N + QLG + P + +
Sbjct: 367 FSFVCIEGGGLAGKKVVSLA-LGQDHSIAVSEQGEVFSWGSNKYGQLGYALPKTSHKNDV 425
Query: 163 PIPRSSLKSSQPL-----IGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
PI + + P IG HSVV++ +YTFG + GQLG
Sbjct: 426 PIQTTPRQIFNPFKKEAIIGAAASAIHSVVFTPTGLYTFGKNEGQLG 472
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 111/243 (45%), Gaps = 18/243 (7%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVP---ELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
Q + VY+WG N LG +P E+L LK I F VS +G++
Sbjct: 2788 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLF---VVSQEGKL 2844
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
++CG G GRLGLG +S+V PK + F VA+ S H++ L G VF G
Sbjct: 2845 YACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHS-GGKHALALTQDGKVFSWGE 2903
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAG 201
+LG + I P SLKS + + + CG HS + SS E+YT+G+ G
Sbjct: 2904 GEDGKLGHG---NSISLDKPRLIESLKSKR-IRDIACGSGHSAAITSSGELYTWGLGEYG 2959
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGK 261
+LGH S +PK+ +++ + + S + TA+ L +G G GK
Sbjct: 2960 RLGHGDTATQS----KPKLVQSLVGQRVIQIACGSRDAQTMALTAD-GLVYSWGDGDFGK 3014
Query: 262 KGK 264
G+
Sbjct: 3015 LGR 3017
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
++ Q +V+ WG + LG G+ + D P L++SLK I+ + HS ++ G
Sbjct: 2890 LALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGE 2949
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
+++ G G+ GRLG G ++ PK + + + +A S ++ L G V+ G
Sbjct: 2950 LYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGS-RDAQTMALTADGLVYSWG 3008
Query: 143 LNSFHQLG 150
F +LG
Sbjct: 3009 DGDFGKLG 3016
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 57/227 (25%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G++ + D P+L++ L I + HS ++ G +++ G G+
Sbjct: 3892 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 3951
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS-------ISQDHSVF------------ 131
GRLG G ++PK + +D + VA S ++ D +V+
Sbjct: 3952 YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4011
Query: 132 --------------------------------LMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
L SG+++ G +H+LG H+
Sbjct: 4012 GGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLG-HGTDDHVR 4070
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
P + ++L+ + +I + G H V + + EV+T+G + GQLG
Sbjct: 4071 RPRKV--AALQGKK-IISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4114
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 4/176 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
++ Q N VY WG LG G+ D P+L+++L +I + +S +S +G
Sbjct: 515 LALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSNGE 574
Query: 83 VWSCGHGQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
+++ G G G+LG G S+ V+ P + + VA ++ + SG VF
Sbjct: 575 LYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSW 634
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
G + +LG S TP L C +F + + + EVYT+G
Sbjct: 635 GDGNHGKLGRGGCDG---SKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWG 687
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDK--FHSVFVSDDGRVWSCG 87
+VY G A LG G + VP LL+S++ +K+V ++ H + +S +G V+S G
Sbjct: 3837 KVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWG 3896
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNS 145
G G+LG G+ S PK + ++ LG + I+ HS + +G ++ G
Sbjct: 3897 EGDDGKLGHGNRLSYDRPKLI-----EELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 3951
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
+ +LG + TP +L+ + +I V CG
Sbjct: 3952 YGRLGHGDSEDQL---TPKLIEALQDYK-VIDVACG 3983
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCG 87
+ V+ WG LG G +P ++SL + +V C +F SV ++ G +++ G
Sbjct: 3996 DNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQF-SVALTRSGAIYTWG 4054
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G RLG G++ V P+K+ + K + +A S+ H V G VF G N
Sbjct: 4055 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSL---HCVACTDKGEVFTWGDNDEG 4111
Query: 148 QLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVYSS 190
QLG S PR +L+ + + V CG H++ +S+
Sbjct: 4112 QLG-----DGTTSALQRPRLVHALQGKK-ITRVACGSAHTLAWST 4150
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 9/161 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG + LG G P+++D L ++ +V + S ++ G V++ G G+
Sbjct: 631 VFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGE 690
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
+LG G+E V PK ++ K K + I H + L V+ G N Q
Sbjct: 691 DYKLGHGNEDHVRYPKIIDILKTKK---IKDLYIGHLHVLALTEDQLVYGWGRNDHGQ-- 745
Query: 151 LSPPPSHIV-SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
+ P IV PT P S K+ +IG+ CG S + +
Sbjct: 746 IDPALGTIVPEPTLCPTFSGKN---VIGLACGPTQSFAWCT 783
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+ EVY WG +Y LG G++ P+++D LK IK + + H + +++D V+ G
Sbjct: 680 YGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWG 739
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
G++ + V P K+ +G+A
Sbjct: 740 RNDHGQIDPALGTIVPEPTLCPTFSGKNVIGLA 772
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 17/194 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
VY WG LG G P L+D L + Q+ C +F S+ ++ G VW+ G G
Sbjct: 3004 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQF-SLALTKYGEVWTWGKG 3062
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
RLG G++ V P + + K + VA+ ++ H + + G V+ G N Q
Sbjct: 3063 DYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGAL---HCLAVTDIGQVYAWGDNDHGQQ 3119
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY--------SSREVYTFGIHAG 201
G + IV+ P L ++ + V CG HS+ + +++E TF
Sbjct: 3120 GNG---TTIVNKKPSLVHELDDAR-VNRVSCGSSHSIAWVLTDQPAINNQEPVTFPTTKD 3175
Query: 202 QLGHSPVTVSSASV 215
LG +T + + +
Sbjct: 3176 PLGQMLLTSTVSQI 3189
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 7/177 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG N LG +P L +SL Q+ + V+ DG+V++ G+G
Sbjct: 3786 IYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGA 3845
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG+G SV+ P L + VA+ S H + L G V+ G +LG
Sbjct: 3846 VGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNS-GGKHCLALSSEGHVYSWGEGDDGKLG 3904
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGH 205
S+ P L ++ ++ + CG HS + S+ +YT+G G+LGH
Sbjct: 3905 HGNRLSY---DRPKLIEELLGTE-IVDIACGGHHSAAITSAGWLYTWGKGRYGRLGH 3957
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ ++ ++ EV+ WG + LG G+ P L++ L+ I V + H + V+D
Sbjct: 3045 QFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTD 3104
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
G+V++ G G+ G G + + KK + + D V S HS+ +L+
Sbjct: 3105 IGQVYAWGDNDHGQQGNG---TTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3157
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 77/208 (37%), Gaps = 55/208 (26%)
Query: 15 LIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM----- 69
+I DR + F EV WG+ +N + P D++ IKQ+C
Sbjct: 422 IIADRFQKNHNQTFQEVIAWGSVVTFNGPS--------PVYYDTISELGIKQLCCTERAV 473
Query: 70 ------------------------------------DKFHSVFVSDDGRVWSCGHGQGGR 93
D H + ++ D V+S G+G+ GR
Sbjct: 474 IILSVNGNVYMMYYGSETQRVYGFSEKPITMIASHSDGTHYLALTQDNSVYSWGNGECGR 533
Query: 94 LGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
LG G+ + PK + +K+ +A S +S L +G ++ G ++ +LG
Sbjct: 534 LGHGNMTWYDEPKLIEALVEKNITFIACGST---YSAALSSNGELYTWGRGNYGKLGHGN 590
Query: 154 PPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
++ PT + + + ++ V CG
Sbjct: 591 SDKDVMIPTLV---TALNGHMVVYVACG 615
>gi|156098949|ref|XP_001615489.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804363|gb|EDL45762.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 456
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 27/222 (12%)
Query: 21 IDVSSNQFNEVYIWGTNANY-----NLGTGSQQTRDVPELLDSLKR--ASIKQVCMDKFH 73
+DV++N +Y WG N+ LG G++Q P+ ++S K + +C H
Sbjct: 175 VDVNNN----LYSWGWGGNFFKGANGLGHGNKQNLSTPKKVESFKSDDSEFVNICCGDQH 230
Query: 74 SVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLM 133
S+ ++ +G+V+ CG G+ GRLG G+ + ++++F + + + IS HS
Sbjct: 231 SLVLTKNGKVYGCGRGEFGRLGKGNHGDQLFFEEIDFFISNN---ITVKGISCGHSFSAA 287
Query: 134 LS--GSVFVCGLNSFHQLGLSPP----PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV 187
LS G V+V G N + QLG+ SH V P + +++ + + CG H +
Sbjct: 288 LSTDGEVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFDMENIKIKF-IACGDNHMIA 346
Query: 188 YSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
S V F L +T+S P Q ++I++++
Sbjct: 347 CSENNVIFFWGSRAWLEPKAITLS------PLYQNSVIKKNI 382
>gi|347441967|emb|CCD34888.1| similar to BTB domain and ankyrin repeat containing protein
[Botryotinia fuckeliana]
Length = 1586
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 77/249 (30%)
Query: 20 KIDVSSNQF---NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS------------- 63
KIDVS + +E++ +G+N N++LG G Q R PE + +LKR
Sbjct: 225 KIDVSEPESIDGDELFAFGSNKNFSLGFGDQDDRQYPERI-TLKRPDRLLFQFYENYLDS 283
Query: 64 ------------------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQG 91
I+ V + K S ++ D ++ CG G G
Sbjct: 284 IGNDNLVVGHENFPTTVSELPSMIQNRPIIIQDVVLSKLSSAVLTTDPESNLYMCGFGPG 343
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
GRLG+G E++ + +N K V+ ++ Q+H++ + G +F G N++ QLG
Sbjct: 344 GRLGMGDETTRFNYVPVNQGGLAGK-KVSTVALGQNHTLAVSSEGEIFSWGTNTWGQLGY 402
Query: 152 SPPPSHIVSPTPIPRSSLKSSQP----------------LIGVCCGRFHSVVYSSREVYT 195
+ +PR +LK +P ++G+ HSV ++S ++
Sbjct: 403 N-----------LPRPALKDEEPFCTTPRQIFGPLKREIIVGIAASAIHSVAHTSSSLFC 451
Query: 196 FGIHAGQLG 204
+G + GQLG
Sbjct: 452 WGKNEGQLG 460
>gi|242220699|ref|XP_002476112.1| predicted protein [Postia placenta Mad-698-R]
gi|220724665|gb|EED78692.1| predicted protein [Postia placenta Mad-698-R]
Length = 1354
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTR------------DVPELLDSLKRAS---I 64
K D F +++ WG N N LG + R DVPE R S +
Sbjct: 152 KPDTDDTTFADLFTWGVNRNATLGLENGDDRLFPEQVVIRPPEDVPENEHIDVRFSPIHV 211
Query: 65 KQVCMDKFHSVFVS--DDGRVWSCGHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVA 120
M + H+ ++ D G + CG G GGRLG G ++ +V +L+ +
Sbjct: 212 GDAAMSRLHTAVITSEDRGNLRVCGFGNGGRLGPGQHTQYGLVPLPQLSHT-------IV 264
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLG-LSPPPSHI----VSPTPIPRSSLKSSQPL 175
++ QDH++ L SG V GLN F QLG + P++ S PI + K + PL
Sbjct: 265 SIALGQDHTLALTKSGEVLSWGLNRFAQLGYVVEQPANAGGSGRSEEPIQATPRKVAGPL 324
Query: 176 -----IGVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
+GV + S ++ EVYT+G + GQLG+
Sbjct: 325 KNKRVLGVAACKTASACWTEAEVYTWGTNNGQLGY 359
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 91/188 (48%), Gaps = 13/188 (6%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N+ +++ WG LG G+ +T +P L+ L I QV H V +S DG
Sbjct: 96 MAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDG 155
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
++++ G G+LGLG P KL K G+ +A I+ DHS L LSG+VF
Sbjct: 156 QLFTWGQNTSGQLGLGKGE----PSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVF 211
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N QLGL+ V P I SQ ++ + CG H+ + ++TFG
Sbjct: 212 GWGKNRAGQLGLNDKQDRAV-PCHI---KFLRSQKVVYISCGDEHTAALTKDGGLFTFGD 267
Query: 199 HA-GQLGH 205
+ GQLGH
Sbjct: 268 GSWGQLGH 275
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 11/179 (6%)
Query: 30 EVYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG N + LG G + ++ P L SL + Q+ HS +S G V+ G
Sbjct: 156 QLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGK 215
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGL + P + F + + V S +H+ L G +F G S+ Q
Sbjct: 216 NRAGQLGLNDKQDRAVPCHIKFLRSQK---VVYISCGDEHTAALTKDGGLFTFGDGSWGQ 272
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY--SSREVYTFGIHA-GQLG 204
LG S ++ + + SQ + CGR H++ + SS VY FG ++ GQLG
Sbjct: 273 LGHGSTNSELLPRRVLELMGTEVSQ----IACGRHHTLAFVPSSGVVYAFGCNSHGQLG 327
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY G+N+ LG + PE++ +L I V + HS+ V++ G++++ G G
Sbjct: 54 VYTCGSNSCGQLG--HDKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGD 111
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GG+LGLG+ + V +L ++ M H V L G +F G N+ QLG
Sbjct: 112 GGQLGLGTTETTVRIPRLVKRLCDHRISQVMC--GNQHCVALSRDGQLFTWGQNTSGQLG 169
Query: 151 LSP-PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLG 204
L PS + P P SL + PL + G HS S S V+ +G + AGQLG
Sbjct: 170 LGKGEPSKLF---PHPLKSL-AGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLG 222
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGG 92
WG + LG G ++ P +K+V HSVF+ DG V++CG G
Sbjct: 4 WGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSCG 63
Query: 93 RLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS 152
+ LG + + +SP+ + D + M S + HS+ + G +F G QLGL
Sbjct: 64 Q--LGHDKAGISPEVVG---ALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLG 118
Query: 153 PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
+ + P + R + V CG H V S +++T+G + +GQLG
Sbjct: 119 TTETTVRIPRLVKR---LCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLG 169
>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
CCMP2712]
Length = 240
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 93/178 (52%), Gaps = 5/178 (2%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V+ +G AN LG G+ + +P+ + SL+ I + HS+ + DDG++++ G G
Sbjct: 64 KVFSFGDGANGRLGHGNCRNYSLPQPIASLESKRITFIAAGWTHSMAIDDDGKLFTWGCG 123
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ V P+ ++ + ++ MAS S DHS +G+V+ GL QL
Sbjct: 124 NAGRLGHGNVLDVWRPRFVD-RLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGEHGQL 182
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFH-SVVYSSREVYTFGI-HAGQLGH 205
G+ SH+ P + +S ++ ++ V CG H + V + + T+G GQLGH
Sbjct: 183 GVGSTESHL-EPVLV-KSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQLGH 238
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 2 TVMDNEEMRPIDHLIRDR-KIDVSSNQFNE---------VYIWGTNANYNLGTGSQQTRD 51
V+D R +D L R R K ++S ++ V+ WG + LG GS ++
Sbjct: 132 NVLDVWRPRFVDRLYRIRMKAMMASGSYDHSAVCCENGTVWTWGLGEHGQLGVGSTESHL 191
Query: 52 VPELLDSLKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGS 98
P L+ S+ A+ I +V H+ V++DG + + G G G+LG G+
Sbjct: 192 EPVLVKSMADANLHIVEVSCGGAHTAAVTNDGTLLTWGRGDWGQLGHGN 240
>gi|405118629|gb|AFR93403.1| hypothetical protein CNAG_03903 [Cryptococcus neoformans var.
grubii H99]
Length = 1451
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 45/211 (21%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS---------------IKQVCMDKFH 73
++++WG N N+ LGTG Q + P+ ++ L +A ++ V M K H
Sbjct: 167 TDLFVWGVNRNFALGTGDQSDKAFPDHINLLTQAQAAGRSDPSQKFSHVGVQDVVMSKLH 226
Query: 74 SVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVF 131
+ ++ + G + CG G GRLG S + + + + ++ QDH++
Sbjct: 227 TGVITSESRGNLSLCGFGANGRLGKSIHSQLALVPMTDLQH-----SIVSIALGQDHTLA 281
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI--------------- 176
L G + G N F QLG +++ P K LI
Sbjct: 282 LTSGGYILSWGHNRFSQLG------YVIEAPEKPAGMGKEGDDLIQVSPKRIVGPLKKEF 335
Query: 177 --GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GR S +++ V+T+G +AG LG+
Sbjct: 336 VRGVAAGRMASACWTADAVWTWGTNAGHLGY 366
>gi|255720464|ref|XP_002556512.1| KLTH0H15136p [Lachancea thermotolerans]
gi|238942478|emb|CAR30650.1| KLTH0H15136p [Lachancea thermotolerans CBS 6340]
Length = 1486
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 33/202 (16%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD----------VPELLDSLKRASIKQVCMDKFHSVFVSD 79
E G+N + LGTG + R PE D+ ++ M ++HS+ V+
Sbjct: 238 EFLTTGSNTHLQLGTGDSENRQELYKLNEYSLYPE--DTCQKTRFSTAIMKRYHSLLVTA 295
Query: 80 DGRVWSCGHGQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSV 138
+G V++ G G GRLG G + +S V K++ + ++ V + S HS+ L SG +
Sbjct: 296 EGDVFTAGSGSRGRLGNGDTNASNVCHTKVSLDSER----VKLIDSSDHHSIVLTTSGEI 351
Query: 139 FVCGLNSFHQLGLSPPPS-----------HIVSPTP--IPRSSLKSSQPL--IGVCCGRF 183
F G N + QLG S P S +I SP P + + K + + V C +
Sbjct: 352 FCWGWNRYSQLGYSTPTSNVKKLDNSALENICSPKPKRVVSAPWKKNMSISVKFVACSKV 411
Query: 184 HS-VVYSSREVYTFGIHAGQLG 204
HS ++ + ++++G++ GQ+G
Sbjct: 412 HSCLIDDNNYLFSWGLNLGQMG 433
>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
Length = 791
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 18/181 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASI----KQVCMDKFHSVFVSDDGRVWSC 86
V+ WG+N LG DV L++ + I KQ+ +HS F+++ G V+ C
Sbjct: 166 VFAWGSNLEGQLGL-----PDVSGLVNKPTKVHIPEPVKQISAGYYHSTFLTESGLVYVC 220
Query: 87 GHGQGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G + G+LG+ S S+ V+PK++ + H+V L +G+++ G NS
Sbjct: 221 GESESGKLGIDASFSTQVAPKQMQLPSP-----AVHVACGGHHTVILAENGNLYCTGSNS 275
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQL 203
QLGL S + P +PR L+ ++ + + CG H+ VV S ++YT G G+L
Sbjct: 276 SGQLGLGTNLSELHIPKLLPRGMLR-NETITRISCGESHTAVVTESGKLYTCGDGRHGKL 334
Query: 204 G 204
G
Sbjct: 335 G 335
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 18/200 (9%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
Q ++++G+N LG G + P + +LK + V + H++ + ++++C
Sbjct: 53 QTGRLFVFGSNDWGQLGLGHKNHISKPSCVKALKPERVTHVACGRAHTLICTGSQKIFAC 112
Query: 87 GHGQGGRLGLGSES---SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
G Q G+LG G + SV +P L ++ + + HS+ L G VF G
Sbjct: 113 GSDQEGQLGRGISAIGDSVNTP-VLVYDSGLSGSKIVQIAAGSHHSLALTSDGGVFAWGS 171
Query: 144 NSFHQLGLSPPPSHIVSPTP--IPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IH 199
N QLGL + PT IP +P+ + G +HS + S VY G
Sbjct: 172 NLEGQLGLPDVSGLVNKPTKVHIP-------EPVKQISAGYYHSTFLTESGLVYVCGESE 224
Query: 200 AGQLGHSPVTVSSASVIEPK 219
+G+LG + S ++ + PK
Sbjct: 225 SGKLG---IDASFSTQVAPK 241
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTR-DVPELLDS--LKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+Y G+N++ LG G+ + +P+LL L+ +I ++ + H+ V++ G++++CG
Sbjct: 268 LYCTGSNSSGQLGLGTNLSELHIPKLLPRGMLRNETITRISCGESHTAVVTESGKLYTCG 327
Query: 88 HGQGGRLGL 96
G+ G+LGL
Sbjct: 328 DGRHGKLGL 336
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 15/145 (10%)
Query: 67 VCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMAS 123
C D+ HS + GR++ G G+LGLG ++ + P K L E+ V +
Sbjct: 42 TCGDE-HSAVICQTGRLFVFGSNDWGQLGLGHKNHISKPSCVKALKPER------VTHVA 94
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQL--GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
+ H++ S +F CG + QL G+S + +P + S L S+ ++ + G
Sbjct: 95 CGRAHTLICTGSQKIFACGSDQEGQLGRGISAIGDSVNTPVLVYDSGLSGSK-IVQIAAG 153
Query: 182 RFHSVVYSSR-EVYTFGIH-AGQLG 204
HS+ +S V+ +G + GQLG
Sbjct: 154 SHHSLALTSDGGVFAWGSNLEGQLG 178
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 6/162 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY+ G + + LG + + V L ++ C H+V ++++G ++ G
Sbjct: 217 VYVCGESESGKLGIDASFSTQVAPKQMQLPSPAVHVAC-GGHHTVILAENGNLYCTGSNS 275
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG+ S + KL + S + H+ + SG ++ CG +LG
Sbjct: 276 SGQLGLGTNLSELHIPKLLPRGMLRNETITRISCGESHTAVVTESGKLYTCGDGRHGKLG 335
Query: 151 LSPPPSHIVSPTPIPR-SSLKSSQPLIGVCCGRFHSVVYSSR 191
L +++ T + R L S V CG H+++ R
Sbjct: 336 LEENENNVHELTFVQRYKELFVSD----VACGGCHTILVGQR 373
>gi|366991345|ref|XP_003675438.1| hypothetical protein NCAS_0C00800 [Naumovozyma castellii CBS 4309]
gi|342301303|emb|CCC69070.1| hypothetical protein NCAS_0C00800 [Naumovozyma castellii CBS 4309]
Length = 1359
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 35/217 (16%)
Query: 20 KIDVSSNQFNEVY--------IWGTNANYNLGTGSQQTRD------VPEL-----LDSLK 60
K+ + N+F Y G+N + LGTG++ R + +L L +
Sbjct: 150 KLPMDKNEFQSQYQNGGTHILTLGSNIHCQLGTGNKDNRQKLFQLHINQLQHHTDLTNYN 209
Query: 61 RASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK--DKDKLG 118
K + M ++HS+ V+ D +V+SCG+G GRLG + +V + N+ + D + +
Sbjct: 210 PVRFKDILMTRYHSILVTTDNKVYSCGNGTRGRLGNHNTDNV---SQANYAEIMDLNDID 266
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSH--------IVSPTPIPRSSLK 170
+ + S H++ L +++ G N ++QLG P H + +P+P R
Sbjct: 267 INLVRTSDHHTLLLDGESNLYSWGWNGYNQLGY-PTKQHNENTILENVCNPSP-KRIPYF 324
Query: 171 SSQPLIGVCCGRFHSVVYSSRE-VYTFGIHAGQLGHS 206
+ L + C + HS S VY +G++ GQ+G+S
Sbjct: 325 ENIKLKIIACSKIHSCAVSQDNMVYIWGLNVGQMGNS 361
>gi|336368624|gb|EGN96967.1| hypothetical protein SERLA73DRAFT_111764 [Serpula lacrymans var.
lacrymans S7.3]
Length = 416
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 91/218 (41%), Gaps = 34/218 (15%)
Query: 16 IRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPE----------------LLDSL 59
+R K D + E++ WG N N LG G R P+ L
Sbjct: 78 LRTTKPDATDEGPAELFTWGANRNAALGLGDSDNRTFPDQVIIPRKHDPNLHDKTLEVRF 137
Query: 60 KRASIKQVCMDKFHSVFVS----DDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKD 115
++Q+ M + H+V V+ D+ R+ CG G GGRLG + F +
Sbjct: 138 SPIQVRQISMSRLHTVVVTSESQDNLRL--CGFGSGGRLGPSQHTQYGLMTLPEFSHN-- 193
Query: 116 KLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL---SPPPSHIVSPTPIPRSSLK-- 170
V ++ QDH++ L S V GLN F QLG P S PI S K
Sbjct: 194 ---VVSVALGQDHTLALTKSWEVLSWGLNRFSQLGYVVDQSPMSVGRREEPIQASPRKIG 250
Query: 171 --SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHS 206
+ + G+ + S ++ EV+T+G ++GQLG+S
Sbjct: 251 HLKKETVRGIAACKTASACWTETEVFTWGTNSGQLGYS 288
>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1080
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE--SSVVSPKKLNF 110
P L++L ++ QV H+V +S DG+V++ G G+LGLG E SS+ SP+ +
Sbjct: 113 PRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV-- 170
Query: 111 EKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLK 170
+ + V S DHS L +SGSVF G N QLGL +PT + ++K
Sbjct: 171 -RSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDR-ETPTLVHYLNMK 228
Query: 171 SSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHS 206
+ + CG+ H+ V + V+TFG H GQLGH+
Sbjct: 229 KT---VFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHN 263
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+VY WG N+ LG G + + P+ + SL + QV HS +S G V+ G
Sbjct: 142 QVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWG 201
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG + +P +++ K + A+ +DH+ L + G+VF G +
Sbjct: 202 RNDCGQLGLGDTTDRETPTLVHYLNMKKTV---FAACGKDHTAVLTMDGTVFTFGSGHYG 258
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
QLG + S + P + L ++ + + CGR+H++V + +VY+FG + GQLG
Sbjct: 259 QLGHN---SFRNALCPRLVAELWGAK-VTKIACGRYHTLVLTDHMKVYSFGCNEHGQLG 313
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG G R+ P L+ L K H+ ++ DG V++ G G
Sbjct: 197 VFGWGRNDCGQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGH 256
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG S + + P+ + + G + I+ + H++ L V+ G N Q
Sbjct: 257 YGQLGHNSFRNALCPRLV-----AELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQ 311
Query: 149 LGLSPPPSHIVSPTPI--PR 166
LG +H P P+ PR
Sbjct: 312 LG-PREETHPCVPLPVQLPR 330
>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 371
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N+V WG N N LG G+ + VP+ + + + IK V HSV +++DG ++ G
Sbjct: 228 NKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGW 287
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ G LGLG + + P+K+N + DK + M S H++ + SG ++ G + + Q
Sbjct: 288 GRYGNLGLGDTNDRLIPEKVNIDGDK----IVMVSCGWRHTISISSSGGLYTHGWSKYGQ 343
Query: 149 LG 150
LG
Sbjct: 344 LG 345
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 15/196 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY WG LG G +P + +L+ IKQ+ H + V+ + +V S G
Sbjct: 177 DVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRN 236
Query: 90 QGGRLGLGSESSVVSPKK-LNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G LGLG+ P+K L FE + + M + +HSV + G ++ G +
Sbjct: 237 QNGELGLGTTKDSHVPQKILAFEGIR----IKMVAAGAEHSVAITEDGDLYGWGWGRYGN 292
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHS 206
LGL + IP ++ V CG H++ + SS +YT G GQLGH
Sbjct: 293 LGLGDTNDRL-----IPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHG 347
Query: 207 PVTVSSASVIEPKVQA 222
++ KVQA
Sbjct: 348 DF---EDCLVPRKVQA 360
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ + ++Y WG NLG G R +PE ++ + I V H++ +S G
Sbjct: 274 VAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVN-IDGDKIVMVSCGWRHTISISSSGG 332
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
+++ G + G+LG G + P+K+ DK
Sbjct: 333 LYTHGWSKYGQLGHGDFEDCLVPRKVQALSDK 364
>gi|401423778|ref|XP_003876375.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492617|emb|CBZ27894.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 843
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G Q +PE++ ++K + V FH+VF++DDG ++CG Q
Sbjct: 275 VYTWGIGNSGRLGHGDQDDHLLPEVVTAMKGKRVVDVACGSFHTVFITDDGNAYACGDNQ 334
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
G + G+ E SV +P K+N + V AS + H+ L+ +G V G
Sbjct: 335 GDQCGVVGEYSVPAPTKMNITGGRK---VIHASCGRMHTTLLLNNGDTVVYG 383
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
Query: 46 SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP 105
S+ VP +DSL IK + +H VS DG V++ G G GRLG G + + P
Sbjct: 238 SRVVARVPVRIDSLDDKDIKLLSSGPWHYAAVSADGSVYTWGIGNSGRLGHGDQDDHLLP 297
Query: 106 KKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
+ + K K + VA S H+VF+ G+ + CG N Q G+ S + +PT
Sbjct: 298 EVVTAMKGKRVVDVACGSF---HTVFITDDGNAYACGDNQGDQCGVVGEYS-VPAPT--- 350
Query: 166 RSSLKSSQPLIGVCCGRFHSVVY---SSREVYTFGIHAG-QLGHSPVTVSSASVIE 217
+ ++ + +I CGR H+ + VY G+ G +G+ V +++E
Sbjct: 351 KMNITGGRKVIHASCGRMHTTLLLNNGDTVVYGTGLGLGVGIGYGMRMVRCQAILE 406
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 46 SQQTRDV---PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSV 102
S +TR V P L+DSLK I QV +H + ++ G ++S G G GGRLG G
Sbjct: 621 SGETRGVVLSPLLIDSLK--GIIQVAAGGWHGMALNAIGEIYSWGIGTGGRLGTGDCDHY 678
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
+P ++ ++G + S + + ++V G+N +Q L S +V+PT
Sbjct: 679 YTPVRITHGAFFTRIGCGCYT-----SYGIDDNARLYVWGVNDKNQ--LDTLGSKVVTPT 731
Query: 163 PIPRSSLKSSQPLIGVCCGRFHSVVYSSREVY 194
P+ + ++ C G++ S+ + +
Sbjct: 732 PVLENVREA-------CLGKYFSLALTHNNTF 756
>gi|443704114|gb|ELU01326.1| hypothetical protein CAPTEDRAFT_215877 [Capitella teleta]
Length = 627
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG+N+++ L G+ + P+L+ + + ++Q+ ++ + + +DG V +CG G
Sbjct: 360 VYAWGSNSSHQLAEGTSEKILQPKLVTNFPK--VQQLEAGQYCTFVIDNDGAVSACGKGS 417
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLGLG S+ +PKKL+F+ ++ + S H++ L + G++F G + +LG
Sbjct: 418 YGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALTVEGALFSWGDGDYGKLG 477
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIG-----VCCGRFHS-VVYSSREVYTFGI-HAGQL 203
+S P+ PL G +C G HS V ++YT+G G+L
Sbjct: 478 HGN-----ISTQKYPK---LIQGPLAGKVVKCICAGYRHSAAVTEDGQLYTWGEGDFGRL 529
Query: 204 GH 205
GH
Sbjct: 530 GH 531
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
++Y WG LG G R+VP L+ + +++ QV H++ VS DGR VW+ G
Sbjct: 517 QLYTWGEGDFGRLGHGDNSGRNVPTLVKDI--SNVGQVACGSSHTIAVSQDGRTVWTFG- 573
Query: 89 GQGGRLGLGSESSVVSPK 106
GG+LG + V PK
Sbjct: 574 --GGKLGFEDANRVYRPK 589
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++ WG LG G+ T+ P+L+ L +K +C HS V++DG++++ G G
Sbjct: 465 LFSWGDGDYGKLGHGNISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTEDGQLYTWGEG 524
Query: 90 QGGRLGLGSES 100
GRLG G S
Sbjct: 525 DFGRLGHGDNS 535
>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
Length = 386
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 9/188 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V+ WG + LGT Q +P+LL SI + H + ++ G+V++ G G
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRG 75
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G ++ PK ++F D + A+ HS F+ SG +F CG SF QL
Sbjct: 76 SSGQLGHGDILNITLPKLVSFFDDSV---ITQAAAGWSHSGFVSDSGCIFTCGNGSFGQL 132
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGHSP 207
G S + +P + + S + V CG HS V+++ +V FG GQLG S
Sbjct: 133 GHGDTLS-LSTPAKVSHFNNDSVKM---VACGMRHSLVLFAGNQVCGFGSGKRGQLGFSS 188
Query: 208 VTVSSASV 215
+ S ++
Sbjct: 189 DRIKSVNL 196
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 14/195 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V+ WG ++ LG G +P+L+ + I Q HS FVSD G +++CG+G
Sbjct: 68 KVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNG 127
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG G S+ +P K+ +F D V M + HS+ L V G Q
Sbjct: 128 SFGQLGHGDTLSLSTPAKVSHFNNDS----VKMVACGMRHSLVLFAGNQVCGFGSGKRGQ 183
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG--------IHA 200
LG S V+ P S LK + + G + + + + +++G +HA
Sbjct: 184 LGFSSDRIKSVN-LPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCGGPDVHA 242
Query: 201 GQLGHSPVTVSSASV 215
Q SP++ +V
Sbjct: 243 PQSLPSPLSFREVAV 257
>gi|225557403|gb|EEH05689.1| BTB domain and ankyrin repeat protein [Ajellomyces capsulatus
G186AR]
Length = 1676
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 52/227 (22%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPE-------------------LLDSLKRAS------ 63
+EV+ +G+N N NLG G + R PE ++ + +R S
Sbjct: 247 DEVFTFGSNKNLNLGLGDEDDRQFPERIGLTRPDHLLYTFNRDHRVVRAARRGSDPHAEE 306
Query: 64 -------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSV 102
+Q+ M K H+ ++DD ++ CG G GGRLG G + +
Sbjct: 307 SDIHSVNDIPTLVRARPIIYQQIVMSKLHTGIITDDPESNLFMCGFGPGGRLGTGDQGTR 366
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
S + K V++A + QDHS+ + G VF G N + QLG + P + +
Sbjct: 367 FSFVCIEGGGLAGKKVVSLA-LGQDHSIAVSEQGEVFSWGSNKYGQLGYALPKTSHKNDV 425
Query: 163 PIPRSSLKSSQPL-----IGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
PI + + P IG HSVV++ +YTFG + GQLG
Sbjct: 426 PIQTTPRQIFNPFKKEAIIGAAASAIHSVVFTPTGLYTFGKNEGQLG 472
>gi|449508251|ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Cucumis sativus]
Length = 386
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 16/192 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y+WG N+N LG G + + V P +DSL IK+ + HS+ V+D G V+S G
Sbjct: 184 ELYMWGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWG 243
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE------KDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
G+ GRLG G ES+ + K E K+ + + V + HS + +G+V++
Sbjct: 244 DGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIF 303
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA 200
G + +++ + TP S+L + V CG +H+ V + ++Y++G +
Sbjct: 304 GERATNRVSFGEANK---ATTPSLISTLLDCEE---VACGGYHTCVLTKGGDLYSWGSNE 357
Query: 201 -GQLGHSPVTVS 211
G LG+ +VS
Sbjct: 358 NGCLGNGSTSVS 369
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 26/184 (14%)
Query: 33 IWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGG 92
+WG LG G+ ++ P S R +K + H++F+++ GRV++ G G
Sbjct: 84 VWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYATGLNNFG 143
Query: 93 RLGLGSESSV-VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
+LG+ E P ++ K+ + S +HS + G +++ G+NS QLGL
Sbjct: 144 QLGISDEKRFSTEPVEVRIPKEAMHI-----SAGYNHSCVVTADGELYMWGVNSNGQLGL 198
Query: 152 SPPPSHIVS-PTP--------IPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAG 201
+ V PT I R++L S + V EV+++G +G
Sbjct: 199 GKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSI----------AVADGGEVFSWGDGRSG 248
Query: 202 QLGH 205
+LGH
Sbjct: 249 RLGH 252
>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 316
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N+V WG N N LG G+ + VP+ + + + IK V HSV +++DG ++ G
Sbjct: 173 NKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGW 232
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ G LGLG + + P+K+N + DK + M S H++ + SG ++ G + + Q
Sbjct: 233 GRYGNLGLGDTNDRLIPEKVNIDGDK----IVMVSCGWRHTISISSSGGLYTHGWSKYGQ 288
Query: 149 LG 150
LG
Sbjct: 289 LG 290
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S +VY WG LG G +P + +L+ IKQ+ H + V+ + +V
Sbjct: 117 SKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVL 176
Query: 85 SCGHGQGGRLGLGSESSVVSPKK-LNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
S G Q G LGLG+ P+K L FE + + M + +HSV + G ++ G
Sbjct: 177 SWGRNQNGELGLGTTKDSHVPQKILAFEGIR----IKMVAAGAEHSVAITEDGDLYGWGW 232
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
+ LGL + IP ++ V CG H++ + SS +YT G G
Sbjct: 233 GRYGNLGLGDTNDRL-----IPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYG 287
Query: 202 QLGHSPVTVSSASVIEPKVQA 222
QLGH ++ KVQA
Sbjct: 288 QLGHGDF---EDCLVPRKVQA 305
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ + ++Y WG NLG G R +PE ++ + I V H++ +S G
Sbjct: 219 VAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVN-IDGDKIVMVSCGWRHTISISSSGG 277
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
+++ G + G+LG G + P+K+ DK
Sbjct: 278 LYTHGWSKYGQLGHGDFEDCLVPRKVQALSDK 309
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 16 IRDRKIDVSSNQFN---------EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQ 66
++D+K+ +S ++ E+Y +G N LG Q + P+L+ SL+ +
Sbjct: 466 LKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSM 525
Query: 67 VCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ 126
V +H++ + G +++CG G+LGL + P + + V+ +
Sbjct: 526 VACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQIKLPTLVALPNEM----VSFVACGY 581
Query: 127 DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV 186
HSV + G F G N + QLG+ H P + +L S+ ++ CG +H+V
Sbjct: 582 YHSVVVSTGGRAFSFGRNDYGQLGIG-SKVHQNVPNVV---ALSSNTRMVRATCGCYHTV 637
Query: 187 VYSSR-EVYTFGI-HAGQLGH 205
+ S + +VY FG + GQLG+
Sbjct: 638 LLSEQGQVYVFGRNNKGQLGN 658
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 11/176 (6%)
Query: 32 YIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
Y WG N LG + T+ VP+L++SLK + + HS ++D G +++ G
Sbjct: 438 YSWGYNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMND 497
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGL +P+ + K + V+M + H++ +G +F CG N + QLG
Sbjct: 498 CGQLGLDHTQHQSTPQLV---KSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLG 554
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIH-AGQLG 204
L+ I PT + + S V CG +HSVV S+ ++FG + GQLG
Sbjct: 555 LA-HNRQIKLPTLVALPNEMVS----FVACGYYHSVVVSTGGRAFSFGRNDYGQLG 605
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 10/135 (7%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVF 131
H + ++D G +S G+ G+LG + ++ + PK + KDK KLG AS+S HS
Sbjct: 427 HMIALTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIESLKDK-KLG--FASVSYHHSAV 483
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR 191
+ +G ++ G+N QLGL TP SL++++ + V CG +H+++ ++
Sbjct: 484 ITDAGELYTFGMNDCGQLGLDHTQHQ---STPQLVKSLEATEVSM-VACGLYHTIICTAA 539
Query: 192 -EVYTFGIH-AGQLG 204
E++T G + GQLG
Sbjct: 540 GELFTCGKNDYGQLG 554
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E+Y G N+ LGTG R + I+QV ++++G V +CG
Sbjct: 329 ELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLN 388
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+ G G V + ++ AS +H + L +G + G N QL
Sbjct: 389 KSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQL 448
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFH--SVVYSSREVYTFGIH-AGQLG 204
G + I P I SLK + +G +H +V+ + E+YTFG++ GQLG
Sbjct: 449 GHENLATKIHVPKLI--ESLKDKK--LGFASVSYHHSAVITDAGELYTFGMNDCGQLG 502
>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
adhaerens]
Length = 330
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY +G N+N LG G + P+L+ L +I +V K+HS +S G ++ G G
Sbjct: 109 VYSFGDNSNSQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGD 168
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDK-LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG+ + P L+ + K K + VA + H+ L + G V+ G N + Q+
Sbjct: 169 DGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDL---HTCILTVGGLVYAFGSNIYGQI 225
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
+P + P R S +S+ + V CG FHS + ++Y +G+ G+LG
Sbjct: 226 A-APSMNKFHLPY---RISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDGRLG 278
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFV--SDDGRVWSCGH 88
VY WG+ N LG G P ++++L +IK++ H+VF ++DG+V+S G
Sbjct: 1 VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACG-LHTVFALNAEDGKVYSWGL 59
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ G LG G+ S +P K+ K + + ++ + + +GSV+ G NS Q
Sbjct: 60 GKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQ 119
Query: 149 LGLSPPPSHIVSPTPIPR-SSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGH 205
LG+ P P+ ++ + + +I V CG++HS S++ ++ +G+ GQLG
Sbjct: 120 LGVGD-----TEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGL 174
Query: 206 SPVTVSSASVI 216
+S+ I
Sbjct: 175 GNYNLSTEPTI 185
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 10/172 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVF---VSDDGRVWSC 86
+VY WG LG G+ ++R P + S K +++ + + H+ V++ G V+S
Sbjct: 53 KVYSWGLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSF 112
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G +LG+G P+ + D++ + VA + HS L G++F+ GL
Sbjct: 113 GDNSNSQLGVGDTEPYAEPQLVTVLNDENIIKVACG---KYHSAALSAKGNLFLWGLGDD 169
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFG 197
QLGL ++ +S P + ++ V CG H+ + + VY FG
Sbjct: 170 GQLGLG---NYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFG 218
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY +G+N + S +P + V FHS ++++G++++ G
Sbjct: 214 VYAFGSNIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLET 273
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSV 138
GRLGLG SP ++ +DK K+G +A S+ + ++LS S
Sbjct: 274 DGRLGLGDCKQRSSPTEVEGFRDK-KIG-RIACGSKHTAALIILSSSA 319
>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Monodelphis domestica]
Length = 1170
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y++G+N LG GS+ T + P + +LK +K + H++ +++G+V++ G
Sbjct: 56 LYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHTLVYTEEGKVYAAGGNS 115
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG + + ++F + K + S + S L G +F+ G NS Q+G
Sbjct: 116 EGQLGLGDTEERTTFQLVSFFTAQHK--IKQLSAGSNTSAALTEDGVLFMWGDNSEGQIG 173
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLGHSP 207
L+ +++ P S + +P+ + CG +HS V + E+YTFG G+LG SP
Sbjct: 174 LA-EEANVCVP-----SEVTIGKPISWISCGYYHSAFVTTEGELYTFGEPENGKLGLSP 226
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ ++ + +++ G G+LGLGS+++V P K L EK V +A+
Sbjct: 42 CGDE-HTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEK------VKIAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G V+ G NS QLGL
Sbjct: 95 GRNHTLVYTEEGKVYAAGGNSEGQLGL 121
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 30 EVYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EVY +G LG G+ +T + P+++ L+ I+ + + H+ +SD G +++ G
Sbjct: 262 EVYTFGLGQFGQLGLGTFIFETSE-PKVVKHLQNQKIQYIACGENHTALISDTGHMYTFG 320
Query: 88 HGQGGRLGLGSES 100
G+ G+LGLG E+
Sbjct: 321 DGRHGKLGLGQEN 333
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N+V WG N N LG G+ + VP+ + + + IK V HSV +++DG ++ G
Sbjct: 136 NKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGW 195
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ G LGLG + + P+K+N + DK + M S H++ + SG ++ G + + Q
Sbjct: 196 GRYGNLGLGDTNDRLIPEKVNIDGDK----IVMVSCGWRHTISISSSGGLYTHGWSKYGQ 251
Query: 149 LG 150
LG
Sbjct: 252 LG 253
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S +VY WG LG G +P + +L+ IKQ+ H + V+ + +V
Sbjct: 80 SKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVL 139
Query: 85 SCGHGQGGRLGLGSESSVVSPKK-LNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
S G Q G LGLG+ P+K L FE + + M + +HSV + G ++ G
Sbjct: 140 SWGRNQNGELGLGTTKDSHVPQKILAFEGIR----IKMVAAGAEHSVAITEDGDLYGWGW 195
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
+ LGL + IP ++ V CG H++ + SS +YT G G
Sbjct: 196 GRYGNLGLGDTNDRL-----IPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYG 250
Query: 202 QLGHSPVTVSSASVIEPKVQA 222
QLGH ++ KVQA
Sbjct: 251 QLGHGDF---EDCLVPRKVQA 268
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ + ++Y WG NLG G R +PE ++ + I V H++ +S G
Sbjct: 182 VAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVN-IDGDKIVMVSCGWRHTISISSSGG 240
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
+++ G + G+LG G + P+K+ DK
Sbjct: 241 LYTHGWSKYGQLGHGDFEDCLVPRKVQALSDK 272
>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
Length = 646
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 111/252 (44%), Gaps = 16/252 (6%)
Query: 19 RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFV 77
R + S + VY G N LG G + R+ ++ IKQ+ S +
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155
Query: 78 SDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS 137
++DGR++ G G++GL + S+V P+++ K V+ S HS F+ G
Sbjct: 156 TEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKP-----VSWISCGYYHSAFVTTDGE 210
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
++V G +LGL P+ ++ P+ + + +I V CG H+VV + VYTFG
Sbjct: 211 LYVFGEPENGKLGL---PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAVYTFG 267
Query: 198 IHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGG 256
+ GQ G + EPKV IR+ +I + G H+ + L FG
Sbjct: 268 L--GQFGQLGLGTFLFETSEPKVIEN-IRDQTISYI---SCGENHTALITDIGLMYTFGD 321
Query: 257 GWTGKKGKRLRS 268
G GK G L +
Sbjct: 322 GRHGKLGLGLEN 333
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHK--IKQLSAGSNTSAALTEDGRLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL VS +P+ + +P+ + CG +HS V + E+Y FG G+LG
Sbjct: 172 IGLKN-----VSNVCVPQ-QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+S++ P K L EK V +A+
Sbjct: 42 CGDE-HSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGL 121
>gi|403354995|gb|EJY77059.1| hypothetical protein OXYTRI_01309 [Oxytricha trifallax]
Length = 875
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 14/193 (7%)
Query: 12 IDHLIRDRKIDVSSNQFN--------EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS 63
ID L+ + +DVS + E Y WG LG G R P L++ L+
Sbjct: 69 IDQLLHSQIVDVSCGDNHTVAVTSNGECYSWGQGIYGALGIGQVLNRQKPTLIEELRDIK 128
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
I +V H++F++++G V+SCG G+ G+LGLG + PKK++ ++ G + S
Sbjct: 129 IVKVSCGARHTLFLANNGEVYSCGDGEKGQLGLGCFKKQLFPKKVDTASIQEICGGELHS 188
Query: 124 --ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
++Q + G V+V GLN +LG+ I P P SL+ Q + V G
Sbjct: 189 LFLTQTMGSIIDELGMVWVFGLNEKGELGVGDYGKRI---HPYPSISLQQKQ-IKSVSLG 244
Query: 182 RFHSVVYSSREVY 194
+++ S E Y
Sbjct: 245 SNYAIAISELEDY 257
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
Q +Y+ G+N LG + + + P L+D L + I V H+V V+ +G +
Sbjct: 38 QQGNLYMMGSNQEGKLGINDKDMKFIYSPLLIDQLLHSQIVDVSCGDNHTVAVTSNGECY 97
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
S G G G LG+G V++ +K ++ + + S H++FL +G V+ CG
Sbjct: 98 SWGQGIYGALGIG---QVLNRQKPTLIEELRDIKIVKVSCGARHTLFLANNGEVYSCGDG 154
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR---------EVYT 195
QLGL + P + +S++ +C G HS+ + V+
Sbjct: 155 EKGQLGLGCFKKQLF-PKKVDTASIQE------ICGGELHSLFLTQTMGSIIDELGMVWV 207
Query: 196 FGIH-AGQLG 204
FG++ G+LG
Sbjct: 208 FGLNEKGELG 217
>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
Length = 815
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 16/240 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G + R+ ++ IKQ+ S +++DGR++ G
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL + S+V P+++ K V+ S HS F+ G ++V G +L
Sbjct: 168 SEGQIGLKNVSNVCVPQQVTIGKP-----VSWISCGYYHSAFVTTDGELYVFGEPENGKL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ + + +I V CG H+VV + VYTFG+ GQ G +
Sbjct: 223 GL---PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAVYTFGL--GQFGQLGLG 277
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKGKRLRS 268
EPKV IR+ +I + G H+ + L FG G GK G L +
Sbjct: 278 TFLFETSEPKVIEN-IRDQTISYI---SCGENHTALITDIGLMYTFGDGRHGKLGLGLEN 333
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHK--IKQLSAGSNTSAALTEDGRLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL VS +P+ + +P+ + CG +HS V + E+Y FG G+LG
Sbjct: 172 IGLKN-----VSNVCVPQ-QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+S++ P K L EK V +A+
Sbjct: 42 CGDE-HSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGL 121
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
N VY +G LG G+ +T + P+++++++ +I + + H+ ++D G +++
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSE-PKVIENIRDQTISYISCGENHTALITDIGLMYTF 319
Query: 87 GHGQGGRLGLGSES 100
G G+ G+LGLG E+
Sbjct: 320 GDGRHGKLGLGLEN 333
>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
Length = 732
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N + LG G+ R P + L + V HS+ VS DG VW+ G
Sbjct: 453 VWAWGQNTSGQLGDGTTAQRPAPVQVTELS--GVVAVAAGTSHSLAVSSDGTVWAWGSNA 510
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ + ++P ++ GV + HS+ + G+V+ G NSF QLG
Sbjct: 511 SGQLGDGTTRARLTPVQV-----AGLSGVVAVAAGYFHSLAVRSDGTVWAWGNNSFFQLG 565
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY-SSREVYTFGIHA-GQLGH--- 205
++ PTP+ L + G FHS+V S V+ +G +A GQLG+
Sbjct: 566 ---DGTNTQRPTPVRVPGLSGG---VAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTA 619
Query: 206 ----SPVTVSSAS----VIEPKVQATIIRED 228
SPV V+ S V Q+ +R D
Sbjct: 620 NASFSPVQVTGLSGGVAVAAGDFQSLAVRSD 650
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N++ LG G+ + R VP + L +K D HS+ V DG VW+ G
Sbjct: 153 VWAWGWNSDGQLGDGTTRERHVPVQVAGLS-GGVKVAAGDG-HSLAVCLDGTVWAWGRND 210
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ +P ++ GV + HS+ + G+V+ G NS QLG
Sbjct: 211 SGQLGDGTTVQRSAPVQV-----AGLSGVVAVAAGSSHSLAVRSDGTVWAWGRNSDGQLG 265
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHSPV 208
+ + TP+ + L + V G FHS+ V S V+ +G + GQLG +
Sbjct: 266 DGTTSARL---TPVQVTGLSGG---VAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSM 319
Query: 209 TVS-----------SASVIEPKVQATIIREDLPGFIFESN-RGTKHSFTAETSLGP 252
T S +V + + + R D + + +N G + +A+TS P
Sbjct: 320 TASLTPVQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAP 375
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 82/176 (46%), Gaps = 15/176 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N G GS +T P + +L V K H++ V DG VW+ G
Sbjct: 353 VWAWGNNIEGQRGDGSAKTSTAPVQVTALSGGFT--VAAGKAHALAVRSDGTVWAWGQNL 410
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ +P ++ GVA+A+ DHS+ L L G+V+ G N+ QLG
Sbjct: 411 FGQLGDGTRMQRTAPVQVTGLSG----GVAVAA-GDDHSLGLCLDGTVWAWGQNTSGQLG 465
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
P P+ + L ++ V G HS+ SS V+ +G +A GQLG
Sbjct: 466 DGTTAQR---PAPVQVTELSG---VVAVAAGTSHSLAVSSDGTVWAWGSNASGQLG 515
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 26/220 (11%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N + LG G+ R P + L + V HS+ V DG VW+ G
Sbjct: 203 VWAWGRNDSGQLGDGTTVQRSAPVQVAGLS--GVVAVAAGSSHSLAVRSDGTVWAWGRNS 260
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ S+ ++P ++ GVA+A+ HS+ + G+V+ G N+ QLG
Sbjct: 261 DGQLGDGTTSARLTPVQVTGLSG----GVAVAA-GMFHSLAVRSDGTVWAWGQNTRGQLG 315
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY-SSREVYTFGIH-AGQLGH--- 205
S S TP+ L + V G HS+V S V+ +G + GQ G
Sbjct: 316 ---DGSMTASLTPVQAIGLSEGEA---VAAGETHSLVARSDGTVWAWGNNIEGQRGDGSA 369
Query: 206 ----SPVTVSSAS----VIEPKVQATIIREDLPGFIFESN 237
+PV V++ S V K A +R D + + N
Sbjct: 370 KTSTAPVQVTALSGGFTVAAGKAHALAVRSDGTVWAWGQN 409
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N++ LG G+ R P + L V FHS+ V DG VW+ G
Sbjct: 253 VWAWGRNSDGQLGDGTTSARLTPVQVTGLSGG--VAVAAGMFHSLAVRSDGTVWAWGQNT 310
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG GS ++ ++P + + + + + + HS+ G+V+ G N Q G
Sbjct: 311 RGQLGDGSMTASLTPVQAIGLSEGEAV-----AAGETHSLVARSDGTVWAWGNNIEGQRG 365
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
S S P+ ++L V G+ H++ V S V+ +G + GQLG
Sbjct: 366 ---DGSAKTSTAPVQVTALSGG---FTVAAGKAHALAVRSDGTVWAWGQNLFGQLG 415
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+ WG N + LG G+ R P + L A + V HS+ V DG VW+ G
Sbjct: 103 AWAWGHNGSGELGDGTTFRRTRPVQVTGLSEA--EAVAAGDGHSLVVRSDGTVWAWGWNS 160
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ P ++ K+ + HS+ + L G+V+ G N QLG
Sbjct: 161 DGQLGDGTTRERHVPVQVAGLSGGVKV-----AAGDGHSLAVCLDGTVWAWGRNDSGQLG 215
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
+ + P+ + L ++ V G HS+ V S V+ +G ++ GQLG
Sbjct: 216 ---DGTTVQRSAPVQVAGLSG---VVAVAAGSSHSLAVRSDGTVWAWGRNSDGQLG 265
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ G+N + LG G+ R VP + L A + V HS+ + DG W+ GH
Sbjct: 53 VWAAGSNTSGQLGDGTTSERRVPAQVVGLSDAVL--VAAGSSHSLAIRSDGTAWAWGHNG 110
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G LG G+ P ++ + + + + HS+ + G+V+ G NS QLG
Sbjct: 111 SGELGDGTTFRRTRPVQVTGLSEAEAV-----AAGDGHSLVVRSDGTVWAWGWNSDGQLG 165
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLGHSPV 208
V P+ + L + V G HS+ V V+ +G + +GQLG
Sbjct: 166 DGTTRERHV---PVQVAGLSGG---VKVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGTT 219
Query: 209 TVSSASV 215
SA V
Sbjct: 220 VQRSAPV 226
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 20/151 (13%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ + DG VW+ G G+LG G+ S P ++ D + + HS+ +
Sbjct: 43 HSLAIRPDGTVWAAGSNTSGQLGDGTTSERRVPAQVVGLSDA-----VLVAAGSSHSLAI 97
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSR 191
G+ + G N +LG + P+ + L ++ V G HS VV S
Sbjct: 98 RSDGTAWAWGHNGSGELG---DGTTFRRTRPVQVTGLSEAEA---VAAGDGHSLVVRSDG 151
Query: 192 EVYTFGIHA-GQLG-------HSPVTVSSAS 214
V+ +G ++ GQLG H PV V+ S
Sbjct: 152 TVWAWGWNSDGQLGDGTTRERHVPVQVAGLS 182
>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
Length = 1152
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 111/252 (44%), Gaps = 16/252 (6%)
Query: 19 RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFV 77
R + S + VY G N LG G + R+ ++ IKQ+ S +
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155
Query: 78 SDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS 137
++DGR++ G G++GL + S+V P+++ K V+ S HS F+ G
Sbjct: 156 TEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKP-----VSWISCGYYHSAFVTTDGE 210
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
++V G +LGL P+ ++ P+ + + +I V CG H+VV + VYTFG
Sbjct: 211 LYVFGEPENGKLGL---PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAVYTFG 267
Query: 198 IHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGG 256
+ GQ G + EPKV IR+ +I + G H+ + L FG
Sbjct: 268 L--GQFGQLGLGTFLFETSEPKVIEN-IRDQTISYI---SCGENHTALITDIGLMYTFGD 321
Query: 257 GWTGKKGKRLRS 268
G GK G L +
Sbjct: 322 GRHGKLGLGLEN 333
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHK--IKQLSAGSNTSAALTEDGRLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL VS +P+ + +P+ + CG +HS V + E+Y FG G+LG
Sbjct: 172 IGLKN-----VSNVCVPQ-QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+S++ P K L EK V +A+
Sbjct: 42 CGDE-HSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGL 121
>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 16/240 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G + R+ ++ IKQ+ S +++DGR++ G
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL + S+V P+++ K V+ S HS F+ G ++V G +L
Sbjct: 168 SEGQIGLKNVSNVCVPQQVTIGKP-----VSWISCGYYHSAFVTTDGELYVFGEPENGKL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ + + +I V CG H+VV + VYTFG+ GQ G +
Sbjct: 223 GL---PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAVYTFGL--GQFGQLGLG 277
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKGKRLRS 268
EPKV IR+ +I + G H+ + L FG G GK G L +
Sbjct: 278 TFLFETSEPKVIEN-IRDQTISYI---SCGENHTALITDIGLMYTFGDGRHGKLGLGLEN 333
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHK--IKQLSAGSNTSAALTEDGRLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL VS +P+ + +P+ + CG +HS V + E+Y FG G+LG
Sbjct: 172 IGLKN-----VSNVCVPQ-QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+S+V P K L EK V +A+
Sbjct: 42 CGDE-HSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGL 121
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
N VY +G LG G+ +T + P+++++++ +I + + H+ ++D G +++
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSE-PKVIENIRDQTISYISCGENHTALITDIGLMYTF 319
Query: 87 GHGQGGRLGLGSES 100
G G+ G+LGLG E+
Sbjct: 320 GDGRHGKLGLGLEN 333
>gi|405968936|gb|EKC33959.1| Serine/threonine-protein kinase Nek8 [Crassostrea gigas]
Length = 1493
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 103/253 (40%), Gaps = 71/253 (28%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY WG+ LG G+ +++ PEL+ SL SI + C + S+F SD+G V +CG G
Sbjct: 570 QVYSWGSGDKGQLGHGNMESKMKPELVQSLNGKSISRACCGEGFSIFASDNGIVLTCGDG 629
Query: 90 QG----------------------------------------------------GRLGLG 97
GRLGLG
Sbjct: 630 TSGCLGHGDTLSCYRPRLIETLLSLDVIAISCGSKHVVVVGSEGEVLTWGCGADGRLGLG 689
Query: 98 SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSH 157
+E + P++L E + + + D ++FL GSV+ CG NS ++LGL+
Sbjct: 690 TEDNHCQPQELRIE---EPVVIRDVFCGVDGTMFLTDVGSVYACGSNSDNKLGLNNRQGF 746
Query: 158 IV-------------SPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHA-GQ 202
I+ S P P +L + ++G+ G H+ V+ +YTFG ++ GQ
Sbjct: 747 IMAMKNIFTKTEVEGSNVPTPVRAL-ARHRVLGISMGACHTAVIVEPGHIYTFGKNSEGQ 805
Query: 203 LGHSPVTVSSASV 215
LG S A V
Sbjct: 806 LGIGDTKPSRAPV 818
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 26/182 (14%)
Query: 34 WGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGR 93
WG A+ LG G++ P+ L + I+ V ++F++D G V++CG +
Sbjct: 678 WGCGADGRLGLGTEDNHCQPQELRIEEPVVIRDVFCGVDGTMFLTDVGSVYACGSNSDNK 737
Query: 94 LGLGSESSVVSPKKLNFEKDKDK----------------LGVAMASISQDHSVFLMLSGS 137
LGL + + K F K + + LG++M + H+ ++ G
Sbjct: 738 LGLNNRQGFIMAMKNIFTKTEVEGSNVPTPVRALARHRVLGISMGAC---HTAVIVEPGH 794
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV-YSSREVYTF 196
++ G NS QLG+ P+ P +K+ + V CG ++V +S E+Y +
Sbjct: 795 IYTFGKNSEGQLGIGD-----TKPSRAP-VEVKAMLESVRVQCGNHYTVCSTTSNELYYW 848
Query: 197 GI 198
G+
Sbjct: 849 GL 850
>gi|363733282|ref|XP_420476.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Gallus gallus]
Length = 560
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++ WG N + LG GSQ P+L+ LK + Q+ HSV VS G V+S G
Sbjct: 104 LFTWGQNTHGQLGVGSQDLLISKPQLVKGLKGIPLAQIAAGGAHSVVVSLSGAVYSWGKN 163
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG P ++ + + S +DH+ L +G VF G QL
Sbjct: 164 DFGQLGLGHTEDRDCP---SYVEALEHWKAVFISCGEDHTAVLSKNGLVFTFGAGGAGQL 220
Query: 150 GLSPPPSH----IVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY--SSREVYTFGIHAGQL 203
G + + +V+ R SL V CGR H++VY S +VY+FG + GQL
Sbjct: 221 GHNSTRNEFRPRMVAELWGARVSL--------VACGRQHTLVYVPSLDKVYSFGSYEGQL 272
Query: 204 G 204
G
Sbjct: 273 G 273
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 16/174 (9%)
Query: 55 LLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
L+ L+ I Q+ HS+ +S G +++ G G+LG+GS+ ++S +L K
Sbjct: 76 LVKELENNDIVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQL----VK 131
Query: 115 DKLGVAMASISQ--DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
G+ +A I+ HSV + LSG+V+ G N F QLGL P +L+
Sbjct: 132 GLKGIPLAQIAAGGAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDR---DCPSYVEALEHW 188
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHSPVTVSSASVIEPKVQATI 224
+ + + CG H+ V S V+TFG AGQLGH+ S+ + P++ A +
Sbjct: 189 KAVF-ISCGEDHTAVLSKNGLVFTFGAGGAGQLGHN----STRNEFRPRMVAEL 237
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 16/137 (11%)
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHS 129
D+ H + S DG+++ C G+ KL K+ + + + HS
Sbjct: 47 DETHVLVCSCDGKLYECWTTAPGK-----------TSKLRLVKELENNDIVQIACGDHHS 95
Query: 130 VFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS 189
+ L GS+F G N+ QLG+ I P + LK PL + G HSVV S
Sbjct: 96 MALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLV--KGLKGI-PLAQIAAGGAHSVVVS 152
Query: 190 -SREVYTFGIHA-GQLG 204
S VY++G + GQLG
Sbjct: 153 LSGAVYSWGKNDFGQLG 169
>gi|198477465|ref|XP_002136602.1| GA29094 [Drosophila pseudoobscura pseudoobscura]
gi|198142893|gb|EDY71606.1| GA29094 [Drosophila pseudoobscura pseudoobscura]
Length = 243
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPEL-----LDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
E+Y WG N LG Q +D+P L ++ S+ + HS +S V+
Sbjct: 64 ELYSWGYNIYGQLGV--QSPKDLPHFNAPVQLTTILGTSLATIACGGNHSFLISKSSAVF 121
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
G G+LGL E S P +L K LGV ++SVFL G VF CG
Sbjct: 122 GWGKNTCGQLGLNDEQSRAYPSQL---KTMRTLGVRFVPCGDEYSVFLTNEGGVFTCGAG 178
Query: 145 SFHQLGLSPPPSHIVSPTP-IPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGIHA 200
++ QLG H VS IPR ++ + V CG H+ +V S VY+FG+ A
Sbjct: 179 NYGQLG------HGVSYNEMIPRMVMELMGSTITQVACGNRHTLALVRSGGRVYSFGLGA 232
Query: 201 -GQLG 204
GQLG
Sbjct: 233 SGQLG 237
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 69/125 (55%), Gaps = 10/125 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
V+ WG N LG +Q+R P L +++ ++ V C D++ SVF++++G V++CG G
Sbjct: 120 VFGWGKNTCGQLGLNDEQSRAYPSQLKTMRTLGVRFVPCGDEY-SVFLTNEGGVFTCGAG 178
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGS-VFVCGLNSF 146
G+LG G + + P+ + + +G + ++ H++ L+ SG V+ GL +
Sbjct: 179 NYGQLGHGVSYNEMIPRMV-----MELMGSTITQVACGNRHTLALVRSGGRVYSFGLGAS 233
Query: 147 HQLGL 151
QLG+
Sbjct: 234 GQLGI 238
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 77 VSDDGRVWSCGHGQGGRLGLGSESSVVSPKK-LNFEKDKDKLGVAMASISQDHSVFLMLS 135
+++ G++ SCG G++G +++ V+ K L F K + V + +HS+ L
Sbjct: 3 LTEWGQILSCGDNDCGQVGHFTDNDVIELSKILRFLVSKRLVVVVQIACGNNHSLALTSC 62
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVY 194
G ++ G N + QLG+ P P+ +++ + L + CG HS + S S V+
Sbjct: 63 GELYSWGYNIYGQLGVQSPKDLPHFNAPVQLTTILGT-SLATIACGGNHSFLISKSSAVF 121
Query: 195 TFGIH-AGQLG 204
+G + GQLG
Sbjct: 122 GWGKNTCGQLG 132
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 109/234 (46%), Gaps = 38/234 (16%)
Query: 50 RDVPEL------LDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVV 103
DV EL L S + + Q+ HS+ ++ G ++S G+ G+LG V
Sbjct: 26 NDVIELSKILRFLVSKRLVVVVQIACGNNHSLALTSCGELYSWGYNIYGQLG------VQ 79
Query: 104 SPKKL-NFE---KDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSH 157
SPK L +F + LG ++A+I+ +HS + S +VF G N+ QLGL+ S
Sbjct: 80 SPKDLPHFNAPVQLTTILGTSLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQSR 139
Query: 158 IVSPTPIPRSSLKSSQPL--IGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHSPVTVSSA 213
P S LK+ + L V CG +SV ++ V+T G + GQLGH VS
Sbjct: 140 -----AYP-SQLKTMRTLGVRFVPCGDEYSVFLTNEGGVFTCGAGNYGQLGHG---VSYN 190
Query: 214 SVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLG--PEFGGGWTGKKGKR 265
+I P+ ++ E + I + G +H+ S G FG G +G+ G R
Sbjct: 191 EMI-PR----MVMELMGSTITQVACGNRHTLALVRSGGRVYSFGLGASGQLGIR 239
>gi|39104479|dbj|BAC65474.3| mKIAA0032 protein [Mus musculus]
Length = 938
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 21/182 (11%)
Query: 35 GTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRL 94
G++ L T ++ + VP L+ L + +I QV +H + ++ DG+ ++ G G+L
Sbjct: 1 GSDGQLGLMT-TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 59
Query: 95 GLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS- 152
GLG E S SP+++ + + + +A + HS L LSG+VF G+N+ QLGLS
Sbjct: 60 GLGKEFPSQTSPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 116
Query: 153 ----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
P H+ L +Q ++ + CG H+ V + S V+TFG GQLGH
Sbjct: 117 EKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 167
Query: 207 PV 208
V
Sbjct: 168 SV 169
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+ + WG N++ LG G + ++ P+ + SL+ + QV HS +S G V+ G
Sbjct: 47 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGM 106
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL E SP + + + V S ++H+ L SG VF G S Q
Sbjct: 107 NNAGQLGLSDEKDRESPCHVKLLRTQK---VVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 163
Query: 149 LGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGIHA-GQLG 204
LG V+ PR L+ + + CGR H+ +V SS +Y FG A GQLG
Sbjct: 164 LGHDS-----VNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 218
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 101 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 160
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLM-LSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ + H++ L+ SG ++ G +
Sbjct: 161 CGQLGHDSVNDEVNPRRV-----LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKG 215
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 216 QLG-TGHTCNVKCPSPV 231
>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
sapiens]
gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
Length = 815
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 16/240 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G + R+ ++ IKQ+ S +++DGR++ G
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL + S+V P+++ K V+ S HS F+ G ++V G +L
Sbjct: 168 SEGQIGLKNVSNVCVPQQVTIGKP-----VSWISCGYYHSAFVTTDGELYVFGEPENGKL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ + + +I V CG H+VV + VYTFG+ GQ G +
Sbjct: 223 GL---PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAVYTFGL--GQFGQLGLG 277
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKGKRLRS 268
EPKV IR+ +I + G H+ + L FG G GK G L +
Sbjct: 278 TFLFETSEPKVIEN-IRDQTISYI---SCGENHTALITDIGLMYTFGDGRHGKLGLGLEN 333
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHK--IKQLSAGSNTSAALTEDGRLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL VS +P+ + +P+ + CG +HS V + E+Y FG G+LG
Sbjct: 172 IGLKN-----VSNVCVPQ-QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+S++ P K L EK V +A+
Sbjct: 42 CGDE-HSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGL 121
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
N VY +G LG G+ +T + P+++++++ +I + + H+ ++D G +++
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSE-PKVIENIRDQTISYISCGENHTALITDIGLMYTF 319
Query: 87 GHGQGGRLGLGSES 100
G G+ G+LGLG E+
Sbjct: 320 GDGRHGKLGLGLEN 333
>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
Length = 1019
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ T P + +LK +K + H++ ++++G+V++ G
Sbjct: 99 NKLYMFGSNNWGQLGLGSRSTVSKPTCVKALKPEKVKFAACGRNHTLVLTEEGKVYAAGG 158
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + + F + +L S + S L + G++F+ G NS Q
Sbjct: 159 NNEGQLGLGDTEDRNTFHPICFFTSQHQL--KQLSAGSNTSAALTVDGNLFMWGDNSEGQ 216
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL P+ V + +P+ + CG +HS V E+YTFG G+LG
Sbjct: 217 IGLKNVPNVCVP------HQVTVGKPIAWISCGYYHSAFVTMEGELYTFGETECGKLG 268
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G + R+ + + +KQ+ S ++ DG ++ G
Sbjct: 153 VYAAGGNNEGQLGLGDTEDRNTFHPICFFTSQHQLKQLSAGSNTSAALTVDGNLFMWGDN 212
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL + +V P ++ K +A S HS F+ + G ++ G +L
Sbjct: 213 SEGQIGLKNVPNVCVPHQVTVGKP-----IAWISCGYYHSAFVTMEGELYTFGETECGKL 267
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLGHSPV 208
GL P ++ +P+ + +I V CG H+VV + + VYTFG+ GQLG
Sbjct: 268 GL---PRQLLMNHKVPQLVPGIPEKVIQVACGGGHTVVLTEKAVYTFGLGQFGQLGLGTF 324
Query: 209 TVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKG 263
+A EPK+ I + + I+ S + + L FG G GK G
Sbjct: 325 IFETA---EPKILEPIKDQKI---IYISCGENHTALITDVGLMYTFGDGRHGKLG 373
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 67 VCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMAS 123
C D+ H+ ++ + +++ G G+LGLGS S+V P K L EK V A+
Sbjct: 86 ACGDE-HTAIITGNNKLYMFGSNNWGQLGLGSRSTVSKPTCVKALKPEK------VKFAA 138
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ L G V+ G N+ QLGL
Sbjct: 139 CGRNHTLVLTEEGKVYAAGGNNEGQLGL 166
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 31 VYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY +G LG G+ +T + P++L+ +K I + + H+ ++D G +++ G
Sbjct: 308 VYTFGLGQFGQLGLGTFIFETAE-PKILEPIKDQKIIYISCGENHTALITDVGLMYTFGD 366
Query: 89 GQGGRLGLGSES 100
G+ G+LGLG E+
Sbjct: 367 GRHGKLGLGMEN 378
>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
Length = 480
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 111/252 (44%), Gaps = 16/252 (6%)
Query: 19 RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFV 77
R + S + VY G N LG G + R+ ++ IKQ+ S +
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155
Query: 78 SDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS 137
++DGR++ G G++GL + S+V P+++ K V+ S HS F+ G
Sbjct: 156 TEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKP-----VSWISCGYYHSAFVTTDGE 210
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
++V G +LGL P+ ++ P+ + + +I V CG H+VV + VYTFG
Sbjct: 211 LYVFGEPENGKLGL---PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAVYTFG 267
Query: 198 IHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGG 256
+ GQ G + EPKV IR+ +I + G H+ + L FG
Sbjct: 268 L--GQFGQLGLGTFLFETSEPKVIEN-IRDQTISYI---SCGENHTALITDIGLMYTFGD 321
Query: 257 GWTGKKGKRLRS 268
G GK G L +
Sbjct: 322 GRHGKLGLGLEN 333
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHK--IKQLSAGSNTSAALTEDGRLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG 197
+GL VS +P+ + +P+ + CG +HS V + E+Y FG
Sbjct: 172 IGLKN-----VSNVCVPQ-QVTIGKPVSWISCGYYHSAFVTTDGELYVFG 215
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+S++ P K L EK V +A+
Sbjct: 42 CGDE-HSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGL 121
>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
paniscus]
Length = 815
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 16/240 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G + R+ ++ IKQ+ S +++DGR++ G
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL + S+V P+++ K V+ S HS F+ G ++V G +L
Sbjct: 168 SEGQIGLKNVSNVCVPQQVTIGKP-----VSWISCGYYHSAFVTTDGELYVFGEPENGKL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ + + +I V CG H+VV + VYTFG+ GQ G +
Sbjct: 223 GL---PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAVYTFGL--GQFGQLGLG 277
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKGKRLRS 268
EPKV IR+ +I + G H+ + L FG G GK G L +
Sbjct: 278 TFLFETSEPKVIEN-IRDQTISYI---SCGENHTALITDIGLMYTFGDGRHGKLGLGLEN 333
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHK--IKQLSAGSNTSAALTEDGRLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL VS +P+ + +P+ + CG +HS V + E+Y FG G+LG
Sbjct: 172 IGLKN-----VSNVCVPQ-QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+S+V P K L EK V +A+
Sbjct: 42 CGDE-HSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGL 121
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
N VY +G LG G+ +T + P+++++++ +I + + H+ ++D G +++
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSE-PKVIENIRDQTISYISCGENHTALITDIGLMYTF 319
Query: 87 GHGQGGRLGLGSES 100
G G+ G+LGLG E+
Sbjct: 320 GDGRHGKLGLGLEN 333
>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cavia porcellus]
Length = 780
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 16/240 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G + R+ + +IKQ+ S +S+DGR++ G
Sbjct: 108 VYAAGGNNEGQLGLGDTEERNTFHRISFFTSEHNIKQLSAGSNTSAALSEDGRLFMWGDN 167
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL SV P ++N K ++ S HS F+ + G ++ G +L
Sbjct: 168 SEGQIGLNDVISVCVPHQVNIGKP-----ISWISCGYYHSAFVTMDGELYTFGEPESGKL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P ++ P+ + +I V CG H+VV + + VYTFG+ GQ G +
Sbjct: 223 GL---PKELLINHRTPQLVAGIPEKVIQVACGGGHTVVLTEKAVYTFGL--GQFGQLGLG 277
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKGKRLRS 268
+EPKV I + + +I + G H+ ++ L FG G GK G L +
Sbjct: 278 TFCFETLEPKVIEQIKNQKIT-YI---SCGENHTALISDIGLMYTFGDGRHGKLGLGLEN 333
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+S V P K L EK V A+
Sbjct: 42 CGDE-HTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEK------VQFAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ L + G+V+ G N+ QLGL
Sbjct: 95 GRNHTLILTVVGNVYAAGGNNEGQLGL 121
>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 111/252 (44%), Gaps = 16/252 (6%)
Query: 19 RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFV 77
R + S + VY G N LG G + R+ ++ IKQ+ S +
Sbjct: 96 RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAAL 155
Query: 78 SDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS 137
++DGR++ G G++GL + S+V P+++ K V+ S HS F+ G
Sbjct: 156 TEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKP-----VSWISCGYYHSAFVTTDGE 210
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
++V G +LGL P+ ++ P+ + + +I V CG H+VV + VYTFG
Sbjct: 211 LYVFGEPENGKLGL---PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAVYTFG 267
Query: 198 IHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGG 256
+ GQ G + EPKV IR+ +I + G H+ + L FG
Sbjct: 268 L--GQFGQLGLGTFLFETSEPKVIEN-IRDQTISYI---SCGENHTALITDIGLMYTFGD 321
Query: 257 GWTGKKGKRLRS 268
G GK G L +
Sbjct: 322 GRHGKLGLGLEN 333
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHK--IKQLSAGSNTSAALTEDGRLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL VS +P+ + +P+ + CG +HS V + E+Y FG G+LG
Sbjct: 172 IGLKN-----VSNVCVPQ-QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+S++ P K L EK V +A+
Sbjct: 42 CGDE-HSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGL 121
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G +D P L+D+LK + QV H+V +S+DG V++ G G
Sbjct: 9 VYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGD 68
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG G P+ + + + + A+ H+ + G ++ G + +LG
Sbjct: 69 DGRLGHGDNGWKYVPRIVEALEGQR---IVQATCGSYHTAAVTDKGELYTWGGGMYGKLG 125
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIG-VCCGRFHSVVYSSR-EVYTFG-IHAGQLGHS 206
H PTP L+ + + CG H+VV + +VYT+G G +GH+
Sbjct: 126 HGNESGH---PTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHT 181
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKR--ASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y WG LG G++ P ++ L+ A + Q+ H+V ++D G+V++ G
Sbjct: 112 ELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWG 171
Query: 88 HGQGGRLG-LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
+ G +G ++ P+ L + K VA H+ L +G +F G F
Sbjct: 172 DKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGF---HTAALTAAGEIFTWGEGKF 228
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG-VCCGRFHS-VVYSSREVYTFG 197
+LG + +V PR +G V CG FHS + S E+YT+G
Sbjct: 229 GRLGHGMERNQMV-----PRMVEALMGKRVGHVACGGFHSAAILDSGELYTWG 276
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 8/210 (3%)
Query: 26 NQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
+VY WG N +G T + + +P +L+SL+ ++ QV FH+ ++ G ++
Sbjct: 162 TDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIF 221
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
+ G G+ GRLG G E + + P+ + K VA HS ++ SG ++ G
Sbjct: 222 TWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGF---HSAAILDSGELYTWGGG 278
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
Q+ H R K S P + + H V +S +T + AG
Sbjct: 279 EHGQVYTFGNGDHGKLGHGDVR---KVSVPTLVAGLVKMHVVKVASYNEHTAAL-AGASS 334
Query: 205 HSPVTVSSASVIEPKVQATIIREDLPGFIF 234
+P S +S +++ + +DL F
Sbjct: 335 STPALSSMSSSFMTDIRSLLDNQDLSDVTF 364
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 81 GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
G V+S G G+ G+LGLG + P ++ K K GV + H+V L G+V+
Sbjct: 7 GLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSK---GVVQVACGSGHTVVLSEDGAVYT 63
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTF-GI 198
G +LG V P +L+ Q ++ CG +H+ + + E+YT+ G
Sbjct: 64 WGRGDDGRLGHGDNGWKYV---PRIVEALE-GQRIVQATCGSYHTAAVTDKGELYTWGGG 119
Query: 199 HAGQLGH 205
G+LGH
Sbjct: 120 MYGKLGH 126
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 17/212 (8%)
Query: 19 RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVP---ELLDSLKRASIKQVCMDKFHSV 75
R ID + Q + VY+WG N LG +P E+L LK I F
Sbjct: 2951 RSIDATPPQESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLF--- 3007
Query: 76 FVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
VS +G++++CG G GRLGLG +++V PK + F VA+ S + H++ L
Sbjct: 3008 IVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGK-HALALTQD 3066
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVY 194
G VF G +LG +++ P +LKS + + + CG HS +S E+Y
Sbjct: 3067 GKVFSWGEGEDGKLGHG---NNMSLDKPKLIETLKSKR-IRDIACGSGHSAAIASNGELY 3122
Query: 195 TFGI-HAGQLGHSPVTVSSASVIEPKVQATII 225
T+G+ G+LGH TV+ A PK+ T++
Sbjct: 3123 TWGLGEYGRLGHGD-TVTQA---RPKLVQTLV 3150
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 4/175 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
++ Q +V+ WG + LG G+ + D P+L+++LK I+ + HS ++ +G
Sbjct: 3061 LALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGE 3120
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
+++ G G+ GRLG G + PK + + VA S ++ L G V+ G
Sbjct: 3121 LYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGS-RDAQTMALTTDGCVYSWG 3179
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
F +LG TP+ L + C +F + EV+T+G
Sbjct: 3180 DGDFGKLGRGGSDG---CYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWG 3231
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 57/227 (25%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G++ + D P+L++ L I + HS ++ G +++ G G+
Sbjct: 4051 VYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGR 4110
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS-------ISQDHSVF------------ 131
GRLG G + PK + +D + VA S ++ D +V+
Sbjct: 4111 YGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4170
Query: 132 --------------------------------LMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
L SG+V+ G +H+LG H+
Sbjct: 4171 GGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLG-HGTDDHVR 4229
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
P + ++L+ + +I + G H V S + EV+T+G + GQLG
Sbjct: 4230 RPRKV--AALQGKK-IISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4273
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 4/180 (2%)
Query: 18 DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFV 77
D K ++ Q VY WG LG G + D P+L+++L +I + +S +
Sbjct: 517 DGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAAL 576
Query: 78 SDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS 137
S G +++ G G GRLG G+ V+ P + K + VA S ++ + SG
Sbjct: 577 SVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGS-GDSQTLCVTASGI 635
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
VF G + +LG S TP L + C +F + + + EVYT+G
Sbjct: 636 VFSWGDGDYGKLGRGGTDG---SKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWG 692
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDK--FHSVFVSDDGRVWSCG 87
+VY G A LG G + +P LL+S++ IK+V + H + +S +G V+S G
Sbjct: 3996 KVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWG 4055
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNS 145
G G+LG G++ S PK + +D LGV + I+ HS + +G ++ G
Sbjct: 4056 EGDDGKLGHGNKMSYDRPKLI-----EDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGR 4110
Query: 146 FHQLG 150
+ +LG
Sbjct: 4111 YGRLG 4115
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCG 87
+ V+ WG LG G VP +DSL + +V C +F SV ++ G V++ G
Sbjct: 4155 DNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQF-SVALTRSGAVYTWG 4213
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G RLG G++ V P+K+ + K + +A S+ H V G VF G N
Sbjct: 4214 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSL---HCVACSDKGEVFTWGDNDEG 4270
Query: 148 QLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVYSS 190
QLG S PR +L+ + + V CG H++ +S+
Sbjct: 4271 QLG-----DGTTSALHRPRLVHALQGKK-ITRVACGSAHTLAWST 4309
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG LG G P+++D L ++ +V S ++ G V++ G G
Sbjct: 636 VFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGD 695
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
RLG GSE V PK + +DK + S+ H + L V+ G N + Q
Sbjct: 696 TYRLGHGSEEHVRYPKIIESLRDKK---IKDLSVGATHILVLTEDQFVYGWGRNDYGQ-- 750
Query: 151 LSPPPSHIVS-PTPIPRSSLKSSQPLIGVCCGRFHSVVY 188
+ P ++S PT P SS+ +IG+ G S +
Sbjct: 751 IDPTLGSVISEPTLCPT---LSSKTVIGLASGPTQSFAW 786
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG N LG +P +SL Q+ + V+ DG+V+S G+G
Sbjct: 3945 IYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGYGA 4004
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG+G SV+ P L + VA++S + H + L G V+ G +LG
Sbjct: 4005 AGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGK-HCLALSSEGHVYSWGEGDDGKLG 4063
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGHSPV 208
S+ P L + +I + CG HS + S+ +YT+G G+LGH
Sbjct: 4064 HGNKMSY---DRPKLIEDLLGVE-IIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHG-- 4117
Query: 209 TVSSASVIEPKV 220
S + PKV
Sbjct: 4118 --DSDDQLRPKV 4127
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ ++ ++ EV+ WG + LG G+ P L++ L+ I V + H + V+D
Sbjct: 3216 QFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTD 3275
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML 134
G+V++ G G+ G G+ S P ++ +D V S HS+ +L
Sbjct: 3276 TGQVYAWGDNDHGQQGNGTTSVNRKPSLVHELEDAR---VNRVSCGSSHSIAWVL 3327
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 89/228 (39%), Gaps = 31/228 (13%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ V+ + VY WG + LG G+ P + +L+ I + H V SD
Sbjct: 4198 QFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSD 4257
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
G V++ G G+LG G+ S++ P+ ++ + K VA
Sbjct: 4258 KGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVA------------------- 4298
Query: 140 VCGLNSFHQLGLSPPP---SHIVSPTPIPRSSLKSSQPLI----GVCCGRFHSVVYSSRE 192
CG S H L S S + + TP+ +K + V F ++ +
Sbjct: 4299 -CG--SAHTLAWSTAKATQSRMPASTPMEYDLVKDLSYSVLRNRLVLLHHFAELLCPALA 4355
Query: 193 VYTFGIHAGQLGHSPVTVSS--ASVIEPKVQATIIREDLPGFIFESNR 238
++ H G +P+ V S + +QAT++R+ G + E NR
Sbjct: 4356 MFPITGHVGLSKLAPMLVYSIKEATFRKVIQATMVRDRQHGPVIELNR 4403
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG Y LG GS++ P++++SL+ IK + + H + +++D V+ G
Sbjct: 687 EVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGRN 746
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
G++ S + P K +G+A
Sbjct: 747 DYGQIDPTLGSVISEPTLCPTLSSKTVIGLA 777
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 5/121 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
VY WG LG G P +++ L + QV C +F S+ ++ G VW+ G G
Sbjct: 3175 VYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQF-SLALTKYGEVWTWGKG 3233
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
RLG G++ V P + + K + VA+ ++ H + + +G V+ G N Q
Sbjct: 3234 DYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGAL---HCLAVTDTGQVYAWGDNDHGQQ 3290
Query: 150 G 150
G
Sbjct: 3291 G 3291
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 61/167 (36%), Gaps = 55/167 (32%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM------------------ 69
F EV WG G GS P D++ IKQ+C
Sbjct: 439 FQEVLAWG---GVKFGNGS-----TPFYCDAIAELGIKQLCCTERALMILSLNGNVYNMY 490
Query: 70 --------------------------DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVV 103
D H + ++ DG V+S G+G GGRLG G S
Sbjct: 491 HGSETQYPQRVHGFSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYD 550
Query: 104 SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
PK + +K+ + +A S +S L +SG ++ G ++ +LG
Sbjct: 551 EPKLIEALLEKNIVFIACGST---YSAALSVSGELYTWGRGNYGRLG 594
>gi|428183681|gb|EKX52538.1| hypothetical protein GUITHDRAFT_65062 [Guillardia theta CCMP2712]
Length = 343
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 30/209 (14%)
Query: 9 MRPIDHLIRDRKIDVSSNQFNEVYI--------WGTNANYNLGTGSQQTRDVPELLDSLK 60
+RPI++L R V+ F+ + + +G N N LG G+ ++ + +
Sbjct: 38 LRPIENLTSIRIRQVACGAFHTLLLSDGSGLISFGNNKNGQLGNGTFESCSTAQF----Q 93
Query: 61 RASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
R +KQ+ HS+ + DDG G+ + G+LGL ++ + P+ L+F+ GV
Sbjct: 94 RVMVKQIAAGYDHSLALLDDGTALGWGNNKWGQLGL--DALTLDPEMLSFK------GVV 145
Query: 121 MASISQDHSVFLMLSG----SVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
S DH F ++S +V G N F QLGL S + PTP+ + + Q ++
Sbjct: 146 HMSCGYDH-CFAIVSAQGRRNVLGFGANGFGQLGLGNT-SDVAIPTPVDKVTRVGIQQVV 203
Query: 177 GVCCGRFHSVVYSSREVYTFGIHA-GQLG 204
CG H++V S +VY FG + GQLG
Sbjct: 204 ---CGGNHTMVLSKDKVYAFGRNDFGQLG 229
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
VS+ V +G N LG G+ +P +D + R I+QV H++ +S D +
Sbjct: 158 VSAQGRRNVLGFGANGFGQLGLGNTSDVAIPTPVDKVTRVGIQQVVCGGNHTMVLSKD-K 216
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS-QDHSVFLMLSGSVFVC 141
V++ G G+LGLG V SP+++ KL + + + HS+FL ++G + C
Sbjct: 217 VYAFGRNDFGQLGLGDTVDVSSPQEVRSLSRLPKLKMISSVVCGASHSLFLTVAGELLGC 276
Query: 142 GLNSFHQLGLSPPPSHIVSPTPI 164
G N QLGL + P PI
Sbjct: 277 GRNDLGQLGLGNETVKVTLPLPI 299
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 18/243 (7%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVP---ELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
Q + VY+WG N LG +P E+L LK I F VS +G++
Sbjct: 3257 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLF---VVSQEGKL 3313
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
++CG G GRLGLG +S+V PK + F +A+ S + H++ L G +F G
Sbjct: 3314 YACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGK-HALALTQDGKIFSWGE 3372
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAG 201
+LG + + P SLKS + + + CG HS + SS E+YT+G+ G
Sbjct: 3373 GEDGKLGHG---NSVSLDKPRLIESLKSKR-IRDIACGSGHSAAITSSGELYTWGLGEYG 3428
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGK 261
+LGH +A+ ++PK+ +++ + + S + TA+ S+ +G G GK
Sbjct: 3429 RLGHG----DTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY-SWGDGDFGK 3483
Query: 262 KGK 264
G+
Sbjct: 3484 LGR 3486
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 5/180 (2%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
Q + VY WG LG G + D P+L+++L +I + +S +S +G +++
Sbjct: 522 QDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTW 581
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G GRLG G+ +V+ P + + VA S ++ + SG VF G ++
Sbjct: 582 GRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGS-GDSQTLCVTASGIVFSWGDGNY 640
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAG-QLGH 205
+LG S TP L C G+F + + + EVYT+G G +LGH
Sbjct: 641 GKLGRGGCDG---SKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGH 697
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 22/197 (11%)
Query: 8 EMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV 67
+++PI H+ K +Q ++Y G N LG G P+L+ L + IK++
Sbjct: 3291 KLKPI-HIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKM 3349
Query: 68 CMDK--FHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS 125
+ H++ ++ DG+++S G G+ G+LG G+ S+ P+ + K K +A S
Sbjct: 3350 AVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGS-- 3407
Query: 126 QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS--SQPLIGVCCGRF 183
HS + SG ++ GL + +LG H + T + ++S Q +I V CG
Sbjct: 3408 -GHSAAITSSGELYTWGLGEYGRLG------HGDTATQMKPKLVQSLVGQRVIQVACG-- 3458
Query: 184 HSVVYSSREVYTFGIHA 200
SR+ T + A
Sbjct: 3459 ------SRDAQTMALTA 3469
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 92/227 (40%), Gaps = 57/227 (25%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G++ D P+L++ L I + HS ++ G +++ G G+
Sbjct: 4400 VYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4459
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS-------ISQDHSVF------------ 131
GRLG G ++PK + +D + VA S ++ D +V+
Sbjct: 4460 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4519
Query: 132 --------------------------------LMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
L SG+++ G +H+LG H+
Sbjct: 4520 GGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLG-HGTDDHVR 4578
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
P + ++L+ + +I + G H V + + EV+T+G + GQLG
Sbjct: 4579 RPRKV--AALQGKK-IISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4622
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 7/177 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG N LG +P L +SL Q+ + + V+ DG+V++ G+G
Sbjct: 4294 IYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGA 4353
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG+G SV+ P L + VA+ S + H + L G V+ G +LG
Sbjct: 4354 AGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGK-HCLALSSEGHVYSWGEGDDGKLG 4412
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGH 205
+ ++ P L ++ ++ + CG HS + S+ +YT+G G+LGH
Sbjct: 4413 HG---NRLMYDRPKLIEELLGTE-IVDIACGGHHSAAITSAGWLYTWGKGRYGRLGH 4465
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+ EVY WG Y LG G+++ P++++ L +K++C+ FH + +++D V+ G
Sbjct: 681 YGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWG 740
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
G++ + V P K+ +G+A
Sbjct: 741 RNDYGQIDPALGTVVPEPTLCPTLSGKNIIGLA 773
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 7/160 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG LG G P+++D L ++ +V S ++ G V++ G G+
Sbjct: 632 VFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGE 691
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G RLG G+E + PK + K V + H + L V+ G N + Q+
Sbjct: 692 GYRLGHGNEEHIRYPKVIEVLXTKK---VKELCVGNFHVLALTEDQLVYGWGRNDYGQID 748
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
P V P P +L S + +IG+ CG S + +
Sbjct: 749 ---PALGTVVPEPTLCPTL-SGKNIIGLACGLTQSFAWCT 784
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCG 87
+ V+ WG LG G +P ++SL + +V C +F SV ++ G +++ G
Sbjct: 4504 DNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQF-SVALTRSGAIYTWG 4562
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G RLG G++ V P+K+ + K + +A S+ H V G VF G N
Sbjct: 4563 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSL---HCVACTDKGEVFTWGDNDEG 4619
Query: 148 QLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVYSS 190
QLG S PR +L+ + + V CG H++ +S+
Sbjct: 4620 QLG-----DGTTSALQRPRLVHALQGKK-ITRVACGSAHTLAWST 4658
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
VY WG LG G P L+D L + Q+ C +F S+ ++ G VW+ G G
Sbjct: 3473 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQF-SLALTKYGEVWTWGKG 3531
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
RLG G++ V P + + K + VA+ ++ H + + +G V+ G N Q
Sbjct: 3532 DYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGAL---HCLAVTDTGQVYAWGDNDHGQQ 3588
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY 188
G S IV+ P L ++ + V CG HS+ +
Sbjct: 3589 GNG---STIVNKKPSLVHELDDAR-VNRVSCGSSHSIAW 3623
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDK--FHSVFVSDDGRVWSCG 87
+VY G A LG G + VP LL+S++ +K+V ++ H + +S +G V+S G
Sbjct: 4345 KVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWG 4404
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNS 145
G G+LG G+ PK + ++ LG + I+ HS + +G ++ G
Sbjct: 4405 EGDDGKLGHGNRLMYDRPKLI-----EELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4459
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
+ +LG + TP +L+ + +I V CG
Sbjct: 4460 YGRLGHGDSEDQL---TPKLVEALQDYK-VIDVACG 4491
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ ++ ++ EV+ WG + LG G+ P L++ L+ + V + H + V+D
Sbjct: 3514 QFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTD 3573
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
G+V++ G G+ G G S + KK + + D V S HS+ +L+
Sbjct: 3574 TGQVYAWGDNDHGQQGNG---STIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3626
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 47/104 (45%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ V+ + +Y WG + LG G+ P + +L+ I + H V +D
Sbjct: 4547 QFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTD 4606
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
G V++ G G+LG G+ S++ P+ ++ + K VA S
Sbjct: 4607 KGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGS 4650
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHS 129
D H + ++ D V+S G+G GGRLG G PK + DK+ +A S +S
Sbjct: 513 DGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGST---YS 569
Query: 130 VFLMLSGSVFVCGLNSFHQLG 150
L +G ++ G ++ +LG
Sbjct: 570 AVLSSNGELYTWGRGNYGRLG 590
>gi|330837672|ref|YP_004412313.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
17374]
gi|329749575|gb|AEC02931.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
DSM 17374]
Length = 812
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 24/219 (10%)
Query: 33 IWGTNANYN--LGTGSQQTRDVPELLDSLKRAS-----IKQVCMDKFHSVFVSDDGRVWS 85
+W T NY+ LG G R P + + A + V + H++ V DG +W+
Sbjct: 459 LWATGYNYDGQLGVGDNTDRSTPVQVKASTAADDFMTDVADVFAGESHTMIVKKDGTLWA 518
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL--GVAMASISQDHSVFLMLSGSVFVCGL 143
G+ G+LG+G + S +P ++ D D VA S+ H++ L G+++ G
Sbjct: 519 TGYNNHGQLGVGDDISRSTPVRVKASTDPDDFMTDVAAVSVGGGHTMILKKDGTLWATGY 578
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-G 201
N QLG+ +P P+P + + P++ V G H+++ ++ G +
Sbjct: 579 NYDGQLGVGDYNDR-STPVPVPSMNTDPNNPVVAVSVGFSHTMILKKDGTLWATGSNGEA 637
Query: 202 QLG-------HSPVTVSS-----ASVIEPKVQATIIRED 228
QLG ++PV VSS A+V + I+++D
Sbjct: 638 QLGVDDNLNKNTPVPVSSMGNQVAAVSAGETHTMILKKD 676
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 16/181 (8%)
Query: 33 IW--GTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+W G+N LG ++ P + S+ + V + H++ + DG +W+ G+
Sbjct: 628 LWATGSNGEAQLGVDDNLNKNTPVPVSSMGN-QVAAVSAGETHTMILKKDGTLWATGYNG 686
Query: 91 GGRLGLGSES---SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LGLGS S ++ +P + VA S + H++ + G+++ GLN
Sbjct: 687 YGELGLGSSSLGTNISTPVPVPSMNTDPNNPVAAVSAGKLHTMIVKKDGTLWATGLNDSG 746
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLGH 205
QLG + TP+ SS + V G +H+++ ++ G + AGQLG
Sbjct: 747 QLG---DGDNTDRSTPVQVSS-----NVEAVFAGGYHTMILKKDGTLWATGNNWAGQLGV 798
Query: 206 S 206
S
Sbjct: 799 S 799
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
+K V +H++ + DG +W+ G+ G+LG+G + +P ++ D +A
Sbjct: 440 VKSVSAGGYHTMILKTDGTLWATGYNYDGQLGVGDNTDRSTPVQVKASTAADDFMTDVAD 499
Query: 124 I--SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
+ + H++ + G+++ G N+ QLG+
Sbjct: 500 VFAGESHTMIVKKDGTLWATGYNNHGQLGV 529
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 33 IWGTNANYN--LGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+W T N + LG G R P + S +++ V +H++ + DG +W+ G+
Sbjct: 737 LWATGLNDSGQLGDGDNTDRSTPVQVSS----NVEAVFAGGYHTMILKKDGTLWATGNNW 792
Query: 91 GGRLGLGSESSVVSPKKLNF 110
G+LG+ ++ +P+++ F
Sbjct: 793 AGQLGVSDNTNRSTPEQVVF 812
>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
Length = 461
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 20/162 (12%)
Query: 52 VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE-SSVVSPKKLNF 110
VP L+ L + +I QV +H + ++ DG+ ++ G G+LGLG E S SP+++
Sbjct: 9 VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRV-- 66
Query: 111 EKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS-----PPPSHIVSPTPIP 165
+ + + +A + HS L LSG+VF G+N+ QLGLS P H+
Sbjct: 67 -RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV------- 118
Query: 166 RSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGH 205
L +Q ++ + CG H+ V + S V+TFG GQLGH
Sbjct: 119 --KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 158
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+ + WG N++ LG G + ++ P+ + SL+ + QV HS +S G V+ G
Sbjct: 39 QFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGM 98
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL E SP + + + V S ++H+ L SG VF G S Q
Sbjct: 99 NNAGQLGLSDEKDRESPCHVKLLRTQK---VVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 155
Query: 149 LGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSVVY--SSREVYTFGIHA-GQLG 204
LG + PR L+ + + CGR H++ + SS +Y FG A GQLG
Sbjct: 156 LGHGSMNDEVN-----PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 93 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 152
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG GS + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 153 CGQLGHGSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 207
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 208 QLG-TGHTCNVKCPSPV 223
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 111/243 (45%), Gaps = 18/243 (7%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVP---ELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
Q + VY+WG N LG +P E+L LK I F VS +G++
Sbjct: 2932 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLF---VVSQEGKL 2988
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
++CG G GRLGLG +S+V PK + F V++ S H++ L G VF G
Sbjct: 2989 YACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHS-GGKHALALTQDGKVFSWGE 3047
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAG 201
+LG + I P SLKS + + + CG HS + SS E+YT+G+ G
Sbjct: 3048 GEDGKLGHG---NSISLDKPRLIESLKSKR-IRDIACGSGHSAAITSSGELYTWGLGEYG 3103
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGK 261
+LGH S +PK+ +++ + + S + TA+ L +G G GK
Sbjct: 3104 RLGHGDTATQS----KPKLVQSLVGQRIIQIACGSRDAQTMALTAD-GLVYSWGDGDFGK 3158
Query: 262 KGK 264
G+
Sbjct: 3159 LGR 3161
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
++ Q N VY WG LG G + D P+L+++L +I + +S +S +G
Sbjct: 518 LALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSNGE 577
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
+++ G G GRLG G+ +V+ P + + VA S ++ + SG VF G
Sbjct: 578 LYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGS-GDSQTLCVTASGIVFSWG 636
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAG 201
++ +LG S TP L C G+F + + + EVYT+G A
Sbjct: 637 DGNYGKLGRGGCDG---SKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAY 693
Query: 202 QLGH 205
+LGH
Sbjct: 694 RLGH 697
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
++ Q +V+ WG + LG G+ + D P L++SLK I+ + HS ++ G
Sbjct: 3034 LALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGE 3093
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
+++ G G+ GRLG G ++ PK + + + +A S ++ L G V+ G
Sbjct: 3094 LYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACGS-RDAQTMALTADGLVYSWG 3152
Query: 143 LNSFHQLG 150
F +LG
Sbjct: 3153 DGDFGKLG 3160
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 57/227 (25%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G++ + D P+L++ L I + HS ++ G +++ G G+
Sbjct: 4061 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4120
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS-------ISQDHSVF------------ 131
GRLG G ++PK + +D + VA S ++ D +V+
Sbjct: 4121 YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4180
Query: 132 --------------------------------LMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
L SG+++ G +H+LG H+
Sbjct: 4181 GGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLG-HGTDDHVR 4239
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
P + ++L+ + +I + G H V + + EV+T+G + GQLG
Sbjct: 4240 RPRKV--AALQGKK-IISIATGSLHCVACTDKGEVFTWGDNDEGQLG 4283
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+ EVY WG Y LG G++ P+++D LK +K++C+ H + +++D ++ G
Sbjct: 681 YGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWG 740
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
G++ + V P K+ +G+A
Sbjct: 741 RNDYGQIDPALGTVVPEPTLCPTLSGKNVIGLA 773
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 7/160 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG LG G P+++D L ++ +V S ++ G V++ G G+
Sbjct: 632 VFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGE 691
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
RLG G+E V PK ++ K K V + H + L ++ G N + Q+
Sbjct: 692 AYRLGHGNEDHVRYPKIIDILKTKK---VKELCVGNLHVLALTEDQLIYGWGRNDYGQID 748
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
P V P P +L S + +IG+ CG S + +
Sbjct: 749 ---PALGTVVPEPTLCPTL-SGKNVIGLACGPTQSFAWCT 784
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDK--FHSVFVSDDGRVWSCG 87
+VY G A LG G + VP LL+S++ +K+V ++ H + +S +G V+S G
Sbjct: 4006 KVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWG 4065
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNS 145
G G+LG G+ S PK + ++ LG + I+ HS + +G ++ G
Sbjct: 4066 EGDDGKLGHGNRLSYDRPKLI-----EELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4120
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
+ +LG + TP +L+ + +I V CG
Sbjct: 4121 YGRLGHGDSEDQL---TPKLIEALQDYK-VIDVACG 4152
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCG 87
+ V+ WG LG G +P ++SL + +V C +F SV ++ G +++ G
Sbjct: 4165 DNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQF-SVALTRSGAIYTWG 4223
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G RLG G++ V P+K+ + K + +A S+ H V G VF G N
Sbjct: 4224 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSL---HCVACTDKGEVFTWGDNDEG 4280
Query: 148 QLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVYSS 190
QLG S PR +L+ + + V CG H++ +S+
Sbjct: 4281 QLG-----DGTTSALQRPRLVHALQGKK-ITRVACGSAHTLAWST 4319
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 17/191 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
VY WG LG G P L+D L + Q+ C +F S+ ++ G VW+ G G
Sbjct: 3148 VYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQF-SLALTKYGEVWTWGKG 3206
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
RLG G++ V P + + K + VA+ ++ H + + G V+ G N Q
Sbjct: 3207 DYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGAL---HCLAVTDIGQVYAWGDNDHGQQ 3263
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY--------SSREVYTFGIHAG 201
G + IV+ P L ++ + V CG HS+ + +++E TF
Sbjct: 3264 GNG---TTIVNKKPSLVHELDDAR-VNRVSCGSSHSIAWVLTDQPTINNQEPVTFPTTKD 3319
Query: 202 QLGHSPVTVSS 212
LG +T S
Sbjct: 3320 PLGQMLLTFKS 3330
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 7/177 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG N LG +P L +SL Q+ + V+ DG+V++ G+G
Sbjct: 3955 IYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGA 4014
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG+G SV+ P L + VA+ S H + L G V+ G +LG
Sbjct: 4015 VGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNS-GGKHCLALSSEGHVYSWGEGDDGKLG 4073
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGH 205
S+ P L ++ ++ + CG HS + S+ +YT+G G+LGH
Sbjct: 4074 HGNRLSY---DRPKLIEELLGTE-IVDIACGGHHSAAITSAGWLYTWGKGRYGRLGH 4126
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ ++ ++ EV+ WG + LG G+ P L++ L+ + V + H + V+D
Sbjct: 3189 QFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTD 3248
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
G+V++ G G+ G G + + KK + + D V S HS+ +L+
Sbjct: 3249 IGQVYAWGDNDHGQQGNG---TTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3301
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 65/180 (36%), Gaps = 55/180 (30%)
Query: 15 LIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM----- 69
+I DR + F EV WG+ LG GS P D++ IKQ+C
Sbjct: 422 IIADRFQKNHNQTFQEVIAWGS---VKLGNGSS-----PFYYDTIAELGIKQLCCTERAL 473
Query: 70 ---------------------------------------DKFHSVFVSDDGRVWSCGHGQ 90
D H + ++ D V+S G+G
Sbjct: 474 MILSVNGNVYMMYYGSETQYPQRVYGFSEKPIIMIASHSDGTHYLALTQDNSVYSWGNGD 533
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GGRLG G + PK + +K+ +A S +S L +G ++ G ++ +LG
Sbjct: 534 GGRLGHGDRAWYDEPKLIEALVEKNITFIACGST---YSAALSSNGELYTWGRGNYGRLG 590
>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 110/251 (43%), Gaps = 39/251 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTR--DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y+WG N+N LG G + VP ++ L SIK V + HSV +D G S G
Sbjct: 138 ELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQGEALSWG 197
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE------KDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
G GRLG G ESS++ + + E + + + V + HS + +GSVF+
Sbjct: 198 AGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIF 257
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHA 200
G + + G + +P+ I S L S+ V CG +H+ V+ SS E++T+G +
Sbjct: 258 GERAMDKFGFREAK-NATAPSMI--SELPYSKQ---VACGGYHTCVISSSGELFTWGSNE 311
Query: 201 -GQLG-------HSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGP 252
G LG H P + P Q + G KH TA S G
Sbjct: 312 NGCLGMGFMETIHFPERIEGPFSKNPVSQVSC--------------GWKH--TAAISEGN 355
Query: 253 EFGGGWTGKKG 263
F GW G G
Sbjct: 356 VFTWGWGGSYG 366
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 14/104 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSVFVSDDGRVWSCG- 87
E++ WG+N N LG G +T PE ++ + + QV H+ +S+ G V++ G
Sbjct: 303 ELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAISE-GNVFTWGW 361
Query: 88 -----------HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
H GG+LG GS+ + PK + FE+ L V+
Sbjct: 362 GGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVS 405
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 9/190 (4%)
Query: 19 RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVS 78
R++ S + +WG LG GS +++ P + + S+ + H++F++
Sbjct: 23 RRLSSSEPRKRFAALWGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLT 82
Query: 79 DDGRVWSCGHGQGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS 137
+ G V++ G G+LG+ + + + P +++ K + + HS + G
Sbjct: 83 ESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPKK----IIHIAAGYYHSAAITADGE 138
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTF 196
+++ G NS QLGL ++ VS P L + V G HSV + + E ++
Sbjct: 139 LYMWGKNSNGQLGLGKKAANAVS-VPSKVECLNGISIKM-VALGSEHSVAATDQGEALSW 196
Query: 197 GI-HAGQLGH 205
G +G+LGH
Sbjct: 197 GAGGSGRLGH 206
>gi|380029875|ref|XP_003698590.1| PREDICTED: uncharacterized protein LOC100869963 [Apis florea]
Length = 1858
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 14/172 (8%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N VY WG++ LG G PEL+ SL + I ++HSV ++ DGRV++ G
Sbjct: 889 NGVYAWGSSQFGQLGLGKILQCSTPELITSLAQEVIIDAVAGQYHSVALTSDGRVFTWGW 948
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS--GSVFVCGLNSF 146
G G+LG G+ ++P + LG+ + I+ H+ L LS G ++ G N F
Sbjct: 949 GVHGQLGHGNTDKKMTPTLVT-----SLLGIVIRFITAGHAHTLALSTEGIIYAFGCNIF 1003
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFG 197
QLG+ ++I S PI S S+ +I + G FH++ S + ++Y +G
Sbjct: 1004 GQLGVG---NNIKSSVPIKVS---LSERIILIATGYFHNLAVSCTNKLYIWG 1049
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTR-DVPELLDS--LKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
VY WG++ LGTG R P+++ + + V H++ V+++G V++ G
Sbjct: 837 VYTWGSSVQGCLGTGPSVLRYGSPQVISFFWIMEIEVLSVSCGHCHTLAVTNNG-VYAWG 895
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
Q G+LGLG +P+ + + + A Q HSV L G VF G
Sbjct: 896 SSQFGQLGLGKILQCSTPELITSLAQE---VIIDAVAGQYHSVALTSDGRVFTWGWGVHG 952
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
QLG + TP +SL + + G H++ S+ +Y FG + GQLG
Sbjct: 953 QLGHGNTDKKM---TPTLVTSLLGI-VIRFITAGHAHTLALSTEGIIYAFGCNIFGQLG 1007
>gi|426245676|ref|XP_004016632.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Ovis aries]
Length = 538
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 31 VYIWGTNANYNLGTGSQQ-TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++ WG N+ LG G ++ +L D K IKQ+ HS V+D+G ++ CG
Sbjct: 91 LFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKQITGGGGHSAVVTDEGSLFVCGLN 150
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFH 147
+ G+LGLG V L F K LG A+ ++ D ++ L +G V CG NSF
Sbjct: 151 KDGQLGLGHTEEV-----LYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFG 205
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG+ P V P I
Sbjct: 206 QLGVPRGPRRCVIPQAI 222
>gi|212721294|ref|NP_001132288.1| uncharacterized protein LOC100193728 [Zea mays]
gi|195624280|gb|ACG33970.1| protein RCC2 [Zea mays]
gi|413919836|gb|AFW59768.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 549
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 34/205 (16%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ + + Y WG N LG G R++P ++ L + I + C+ + H+V V+DDG+
Sbjct: 84 VALDAGGKCYTWGRNEKGQLGHGDTLLRNLPTVVSQLSKYKIIKACVGRNHTVVVTDDGK 143
Query: 83 VWSCGHGQGGRLGLGS-----ESSVVSPKKLNFEKDKDKLGVAMA---SISQDHSVFL-- 132
S GH + G+LG GS ESS VS VA A + D + +L
Sbjct: 144 SLSFGHNKHGQLGTGSLRNEIESSPVS------------CIVAEATNVACGADFTAWLSS 191
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSH---------IVSPTPIPRS-SLKSSQPLIGVCCGR 182
+ S+ GL + QLG + P P PR+ + S + ++ V CG
Sbjct: 192 VEGSSILTAGLPQYGQLGHGTDNEYNAKESSVKLTYEPQPRPRAIAAFSGKTVVKVACGT 251
Query: 183 FHSVVYSSRE-VYTFGIHA-GQLGH 205
H+V S VYT+G G+LGH
Sbjct: 252 NHTVAVDSNGFVYTWGFGGYGRLGH 276
>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
Length = 1020
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G + R+ ++ IKQ+ S +++DGR++ G
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL + S+V P+++ K V+ S HS F+ G ++V G +L
Sbjct: 168 SEGQIGLKNVSNVCVPQQVTIGKP-----VSWISCGYYHSAFVTTDGELYVFGEPENGKL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ + + +I V CG H+VV + VYTFG+ GQ G +
Sbjct: 223 GL---PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAVYTFGL--GQFGQLGLG 277
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKG 263
EPKV IR+ +I + G H+ + L FG G GK G
Sbjct: 278 TFLFETSEPKVIEN-IRDQTISYI---SCGENHTALITDIGLMYTFGDGRHGKLG 328
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHK--IKQLSAGSNTSAALTEDGRLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL VS +P+ + +P+ + CG +HS V + E+Y FG G+LG
Sbjct: 172 IGLKN-----VSNVCVPQ-QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+S++ P K L EK V +A+
Sbjct: 42 CGDE-HSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGL 121
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
N VY +G LG G+ +T + P+++++++ +I + + H+ ++D G +++
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSE-PKVIENIRDQTISYISCGENHTALITDIGLMYTF 319
Query: 87 GHGQGGRLGLGSES 100
G G+ G+LGLG E+
Sbjct: 320 GDGRHGKLGLGLEN 333
>gi|114321835|ref|YP_743518.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228229|gb|ABI58028.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 818
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 16/157 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG G R PE + S + + HS+ V DG +WS G+
Sbjct: 293 LWAWGDNEYGQLGLGDTDERHAPEQVGS--NTDWAAISAGRRHSLAVKADGSLWSWGYND 350
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG + +P+++ + D D + S +HS+ + G++ V GLN QLG
Sbjct: 351 SGQLGLGDTADRNAPEQVGADTDWD-----LVSAGGEHSLAVKADGTLMVWGLNHLGQLG 405
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV 187
L S +P PI I + GR H+V
Sbjct: 406 LGDTVSRD-APVPIASG--------IALVAGRNHTVA 433
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG G R PE + S V +H++ V +DG +W+ G
Sbjct: 491 LWAWGRNNYGQLGLGDTDDRATPEQVGS--HTDWAAVNAASYHTLAVKNDGTLWAWGRNS 548
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGL + +P+++ + D A S+ Q H+ + G+++ G N + QLG
Sbjct: 549 SGQLGLSDTNDRHTPERVGSDTD-----WATVSVGQSHTSAVKPDGTLWAWGWNHYGQLG 603
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG---- 204
L S +SP + S + V G H+V V + ++ +G + GQLG
Sbjct: 604 LG-DTSDRLSPEQVGGES-----NWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHT 657
Query: 205 ---HSPVTVSS----ASVIEPKVQATIIREDLPGFIF-ESNRG 239
H+PV V S A+V + ++ D + + E+N G
Sbjct: 658 SDRHAPVQVGSDTDWAAVSASGYRTLAVKADGTLWAWGENNNG 700
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 23/191 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG G RDVPE + + + V + H+V V +G +W+ G+
Sbjct: 144 LWAWGRNGYGRLGLGDTDDRDVPEQVGT--DSDWTAVSAGRDHTVAVKANGTLWAW--GR 199
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GR+GLG P+++ + D L S H+V + G+++ G N+ QLG
Sbjct: 200 SGRIGLGDSGDRDEPEQVGVDNDWIAL-----SAGGSHTVAVKADGTLWAWGRNNAGQLG 254
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG---- 204
L +H +PT + + + + + GR HS+ V + ++ +G + GQLG
Sbjct: 255 LG-DTNHHYTPTQVGTDTDWAKK----ISAGRRHSLAVKADGSLWAWGDNEYGQLGLGDT 309
Query: 205 ---HSPVTVSS 212
H+P V S
Sbjct: 310 DERHAPEQVGS 320
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 18/190 (9%)
Query: 17 RDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVF 76
RD + V +N ++ WG + +G G RD PE + + I + H+V
Sbjct: 182 RDHTVAVKAN--GTLWAWGRSGR--IGLGDSGDRDEPEQV-GVDNDWIA-LSAGGSHTVA 235
Query: 77 VSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSG 136
V DG +W+ G G+LGLG + +P ++ + D K S + HS+ + G
Sbjct: 236 VKADGTLWAWGRNNAGQLGLGDTNHHYTPTQVGTDTDWAK----KISAGRRHSLAVKADG 291
Query: 137 SVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYT 195
S++ G N + QLGL + S+ + GR HS+ V + +++
Sbjct: 292 SLWAWGDNEYGQLGLGDTDERHAP------EQVGSNTDWAAISAGRRHSLAVKADGSLWS 345
Query: 196 FGIH-AGQLG 204
+G + +GQLG
Sbjct: 346 WGYNDSGQLG 355
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 15/176 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG G R PE + ++ V H+V V DG +W+ G
Sbjct: 591 LWAWGWNHYGQLGLGDTSDRLSPEQVGG--ESNWLAVSTGLHHTVAVKTDGTLWAWGWNV 648
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG S +P ++ + D A S S ++ + G+++ G N+ QLG
Sbjct: 649 RGQLGLGHTSDRHAPVQVGSDTD-----WAAVSASGYRTLAVKADGTLWAWGENNNGQLG 703
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFG-IHAGQLG 204
L + TP + + + V G FH++ + + ++ +G H GQLG
Sbjct: 704 LGDTDNR---NTP---AQVGNDADWAAVSTGLFHTLAFKEDDTLWAWGRNHDGQLG 753
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N N LG G R+ P + + A V FH++ +D +W+ G
Sbjct: 691 LWAWGENNNGQLGLGDTDNRNTPAQVGN--DADWAAVSTGLFHTLAFKEDDTLWAWGRNH 748
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG + +P ++ E D + S H++ M G++ GLN+ QLG
Sbjct: 749 DGQLGLGDTDNRDAPVQVGNETD-----WSTVSGGGYHTLATMSDGTLRAWGLNTSGQLG 803
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 16/193 (8%)
Query: 15 LIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-H 73
L+ R V+ N + WG N LG G + P ++ ++ V F H
Sbjct: 424 LVAGRNHTVAVNPDGTLRAWGDNEYGQLGLGVMRYIVTPS--QTVTGSAWAAVNGGSFNH 481
Query: 74 SVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLM 133
S+ + DDG +W+ G G+LGLG +P+++ D A + + H++ +
Sbjct: 482 SLGLRDDGTLWAWGRNNYGQLGLGDTDDRATPEQVGSHTD-----WAAVNAASYHTLAVK 536
Query: 134 LSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFH-SVVYSSRE 192
G+++ G NS QLGLS TP + S V G+ H S V
Sbjct: 537 NDGTLWAWGRNSSGQLGLSDTNDR---HTP---ERVGSDTDWATVSVGQSHTSAVKPDGT 590
Query: 193 VYTFGI-HAGQLG 204
++ +G H GQLG
Sbjct: 591 LWAWGWNHYGQLG 603
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 24/181 (13%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG G P + + + K++ + HS+ V DG +W+ G +
Sbjct: 242 LWAWGRNNAGQLGLGDTNHHYTPTQVGTDTDWA-KKISAGRRHSLAVKADGSLWAWGDNE 300
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG +P+++ D A S + HS+ + GS++ G N QLG
Sbjct: 301 YGQLGLGDTDERHAPEQVGSNTD-----WAAISAGRRHSLAVKADGSLWSWGYNDSGQLG 355
Query: 151 LSP-----PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQL 203
L P + + T V G HS+ V + + +G+ H GQL
Sbjct: 356 LGDTADRNAPEQVGADTDWDL-----------VSAGGEHSLAVKADGTLMVWGLNHLGQL 404
Query: 204 G 204
G
Sbjct: 405 G 405
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 28/162 (17%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H+V V DG +W+ G GRLGLG P+++ + D + S +DH+V +
Sbjct: 134 HTVAVKADGTLWAWGRNGYGRLGLGDTDDRDVPEQVGTDSDWTAV-----SAGRDHTVAV 188
Query: 133 MLSGSVFVCGLNSFHQLGLS---PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VY 188
+G+++ G + LG S P + I + G H+V V
Sbjct: 189 KANGTLWAWGRSGRIGLGDSGDRDEPEQV-----------GVDNDWIALSAGGSHTVAVK 237
Query: 189 SSREVYTFG-IHAGQLG-------HSPVTVSSASVIEPKVQA 222
+ ++ +G +AGQLG ++P V + + K+ A
Sbjct: 238 ADGTLWAWGRNNAGQLGLGDTNHHYTPTQVGTDTDWAKKISA 279
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTR---DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
E+Y WG+N LG S + P L +L + + HS +S G V+
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LGL E++ P +L K LGV + + SVFL G VF CG ++
Sbjct: 223 GRNNCGQLGLNDETNRAYPTQL---KTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAY 279
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGI-HAGQ 202
QLG S +PR ++ + V CG H+ +V S +VY FG+ +GQ
Sbjct: 280 GQLG-----HGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQ 334
Query: 203 LGHSPVTVSSASVIEPKV 220
LG T S+ S++ P+V
Sbjct: 335 LG----TRSTKSLMLPQV 348
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY G+N LG R P+L+ L+ I Q+ HS+ +SD G+V S G
Sbjct: 60 KVYACGSNDYSQLGHDLPTKR--PQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117
Query: 90 QGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG +E +V PK + K + +A + +HS+ L G ++ G N + Q
Sbjct: 118 DCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGN---NHSLALTSCGELYSWGSNIYGQ 174
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFG-IHAGQLG 204
LG++ P P+ ++L PL + CG HS + S S V+ +G + GQLG
Sbjct: 175 LGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG 231
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 82 RVWSCGHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
++ G G+LGLG + +++P+++ + D V + H++FL +G V+
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDT---AVQQVACGHRHTLFLTATGKVY 62
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
CG N + QLG P P IP +I + CG HS+ S +V ++G
Sbjct: 63 ACGSNDYSQLGHDLPTKR---PQLIPE---LQDYVIIQISCGSRHSLALSDWGQVLSWGD 116
Query: 199 H-AGQLGHSPVTVSSASVIE-PKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGG 256
+ GQLGH+ + +++ PKV +R+ + + + G HS A TS G +
Sbjct: 117 NDCGQLGHA----TEKEIVQLPKV----VRQLVSKTVVQIACGNNHSL-ALTSCGELYSW 167
Query: 257 G 257
G
Sbjct: 168 G 168
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y WG+ ++ LG G + + P + +++QV H++F++ G+V++CG
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 88 HGQGGRLG--LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
+LG L ++ + P+ ++ + S HS+ L G V G N
Sbjct: 66 SNDYSQLGHDLPTKRPQLIPELQDYV-------IIQISCGSRHSLALSDWGQVLSWGDND 118
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQL 203
QLG IV + R + S+ ++ + CG HS+ +S E+Y++G + GQL
Sbjct: 119 CGQLG-HATEKEIVQLPKVVRQLV--SKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 175
Query: 204 G-HSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
G +SP ++ + P T++ L G HSF S G FG G
Sbjct: 176 GVNSPNDLTHCNY--PLRLTTLLGIPLAAIAC----GGNHSFLISKS-GAVFGWG 223
>gi|154274708|ref|XP_001538205.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414645|gb|EDN10007.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1676
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 97/227 (42%), Gaps = 52/227 (22%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPE-------------------LLDSLKRAS------ 63
+EV+ +G+N N NLG G + R PE ++ + +R S
Sbjct: 247 DEVFTFGSNKNLNLGLGDEDDRQFPERICLTRPDHLLYTFNRDHRVVRAARRGSDPHVEE 306
Query: 64 -------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSV 102
+Q+ M K H+ ++DD ++ CG G GGRLG G + +
Sbjct: 307 SDIHSVNDIPTLVRARPIIYQQIVMSKLHTGIITDDPESNLFMCGFGPGGRLGTGDQGTR 366
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
S + K V++A + QDHS+ + G VF G N + QLG + P + +
Sbjct: 367 FSFVCIEGGGLAGKKVVSLA-LGQDHSIAVSEQGEVFSWGSNKYGQLGYALPKTIHKNDV 425
Query: 163 PIPRSSLKSSQPL-----IGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
PI + + P IG HSVV++ +YTFG + GQLG
Sbjct: 426 PIQTTPRQIFNPFKKEAIIGAAASAIHSVVFTPTGLYTFGKNEGQLG 472
>gi|167518173|ref|XP_001743427.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778526|gb|EDQ92141.1| predicted protein [Monosiga brevicollis MX1]
Length = 1024
Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 25/237 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY G N + LG + + +++++ ASI+QV + S+ + D G+V++ G G+
Sbjct: 53 VYSAGKNDHRQLGRSGPA--GIFKRIEAIEVASIRQVAAGEDFSLMLDDRGKVYAVGAGE 110
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G ++S + + + + S+ H++ L S VF G N+ QLG
Sbjct: 111 RGQLGCGRQTSEEGHRVPKIIRSLHDVPIVALSVGGRHALALSASSIVFAWGENANGQLG 170
Query: 151 LSPPPSHIV---SPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGH 205
H V PTPIP + + ++G+ GR HS+ + ++ E+Y FG + GQLG
Sbjct: 171 ----NGHFVPSYQPTPIPE---LNGRGVVGLAAGRQHSLALTAASELYAFGANEHGQLG- 222
Query: 206 SPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKK 262
+P+++ ++R L + + + G HS A ++ G F W G +
Sbjct: 223 -------VGDTKPRLRPELVRAALRKGLVKVSAGDFHSL-ARSATGHAF--AWGGNQ 269
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 10 RPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM 69
R + L R+ ++ +E+Y +G N + LG G + R PEL+ + R + +V
Sbjct: 189 RGVVGLAAGRQHSLALTAASELYAFGANEHGQLGVGDTKPRLRPELVRAALRKGLVKVSA 248
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDH 128
FHS+ S G ++ G Q G+ G+G ++ +++ P++++ ++ +A + + H
Sbjct: 249 GDFHSLARSATGHAFAWGGNQWGQCGVGDDADAILLPREIDSVQEHGH--IADIATGKRH 306
Query: 129 SVFLMLSGS-------------VFVCGLNSFHQLGLSPPPSH 157
SV L+++ + +F G NS QLG++ H
Sbjct: 307 SVLLVVTSNQTTPTPSTFHKQLLFTFGANSLAQLGVAAGGDH 348
>gi|328865764|gb|EGG14150.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
Length = 1011
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG + LG S+ +P + LK I Q+ K HS+ + + G V++ G+G
Sbjct: 242 IYSWGLCSYGKLGQYSKNDCPIPSQIMELKNKQITQIACGKDHSLALDEIGCVYAWGNGA 301
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDK-LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GGRLGL V P + D+ K +G+A QDHS+ + G VF G F +L
Sbjct: 302 GGRLGLNKTDVVSLPTMVAHFPDQVKVVGIACG---QDHSMAVCQDGRVFSWGQAGFGKL 358
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIH-AGQLGHSP 207
G S P TP S+ + + V CG +HS+ ++ +VY FG + G+ G
Sbjct: 359 GYSNPMG--FQSTPRRVESIPACKQ---VSCGNWHSLTLTNGGDVYAFGSNREGRCGREL 413
Query: 208 VTVSS 212
TV S
Sbjct: 414 TTVES 418
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 9/185 (4%)
Query: 24 SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
+ N + Y WG L G T L + + + V ++ ++D G +
Sbjct: 184 TENPISPFYQWGQMFTTQLSLGKVSTPQTV-LFNHHQEHGVSNVQFGGNFALMLTDTGMI 242
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
+S G G+LG S++ P ++ K+K + + +DHS+ L G V+ G
Sbjct: 243 YSWGLCSYGKLGQYSKNDCPIPSQIMELKNKQ---ITQIACGKDHSLALDEIGCVYAWGN 299
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
+ +LGL+ + +VS P + ++G+ CG+ HS+ V V+++G G
Sbjct: 300 GAGGRLGLN--KTDVVS-LPTMVAHFPDQVKVVGIACGQDHSMAVCQDGRVFSWGQAGFG 356
Query: 202 QLGHS 206
+LG+S
Sbjct: 357 KLGYS 361
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG G+ P+ + +L I+Q+ H + V+ +G V S G
Sbjct: 81 EVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRN 140
Query: 90 QGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G+LGLG+ + P+K+ FE + + M + +H+ + G +F G +
Sbjct: 141 QNGQLGLGTTEDSLVPQKIQAFE----GISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 196
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHS 206
LGL +V P SS+ + ++ V CG H++ SS +YT+G GQLGH
Sbjct: 197 LGLGDRNDRLV---PQKVSSVDGDK-MVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHG 252
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
++ +++A +R D I + + G +H+ A T+ G +G GW
Sbjct: 253 DF---EDRLVPHRLEA--LRGD---NISQISGGWRHTM-ALTTDGKLYGWGWN 296
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 91/228 (39%), Gaps = 57/228 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV WG N N LG G+ + VP+ + + + SIK V H+ V++DG ++ G G
Sbjct: 133 EVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWG 192
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKL-------------------------------- 117
+ G LGLG + + P+K++ D DK+
Sbjct: 193 RYGNLGLGDRNDRLVPQKVS-SVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGH 251
Query: 118 ------------------GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
++ S H++ L G ++ G N F Q+G H
Sbjct: 252 GDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDH-C 310
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLGH 205
SP I Q +I + CG H++ + ++ V+++G GQLGH
Sbjct: 311 SPIQI---KFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGH 355
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+S + +Y +G + LG G + R VP L++L+ +I Q+ H++ ++ DG+
Sbjct: 230 ISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGK 289
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G G SP ++ F +D+ V S H++ + +VF G
Sbjct: 290 LYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQK---VIQISCGWRHTLAVTDKQNVFSWG 346
Query: 143 LNSFHQLG 150
+ QLG
Sbjct: 347 RGTNGQLG 354
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 21/190 (11%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDH-SVF 131
HSV + V S G G+ G+LG G +SP +L+ + + V + DH + +
Sbjct: 19 HSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGA---DHTTAY 75
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR-SSLKSSQPLIGVCCGRFHSVVYSS 190
+ V+ G F +LG S +++P PI LK Q + CG H + +
Sbjct: 76 SVARTEVYSWGWGDFGRLG-HGNSSDLLTPKPIKALHGLKIRQ----IACGDSHCLAVTM 130
Query: 191 R-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAET 248
EV ++G + GQLG + + S++ K+QA G + A T
Sbjct: 131 EGEVQSWGRNQNGQLG---LGTTEDSLVPQKIQA------FEGISIKMVAAGAEHTAAVT 181
Query: 249 SLGPEFGGGW 258
G FG GW
Sbjct: 182 EDGELFGWGW 191
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N++ EV+ WG+N+N LG +++ P+++ SL + Q+ + HS+ +++ G
Sbjct: 97 LAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNVG 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
++ G G+LGLGS + K K + ++ S D S + SG+V+
Sbjct: 157 EIYCWGSNSHGQLGLGSSGT--PETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGW 214
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-H 199
G NSF QLGL P P SL+ Q + + CG H+ + V+TFG
Sbjct: 215 GKNSFGQLGLGDTTDR---PQPTQLKSLR-FQRVTYIRCGMDHTAALTRDGGVFTFGAGM 270
Query: 200 AGQLGHSPVTVSSASVIEPK 219
GQLGH +SA+ + P+
Sbjct: 271 YGQLGHC----TSANEMLPR 286
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 25/200 (12%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E+Y WG+N++ LG GS T + P L+ L+ I + S V+ G V+ G
Sbjct: 157 EIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWGK 216
Query: 89 GQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G+LGLG + P K L F++ V DH+ L G VF G
Sbjct: 217 NSFGQLGLGDTTDRPQPTQLKSLRFQR------VTYIRCGMDHTAALTRDGGVFTFGAGM 270
Query: 146 FHQLGLSPPPSHIVSPTP-IPRSSLK-SSQPLIGVCCGRFHSVVY--SSREVYTFGI-HA 200
+ QLG H S +PR L+ + +CCGR H++ + S +Y FG+ +
Sbjct: 271 YGQLG------HCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGS 324
Query: 201 GQLGHSPVTVSSASVIEPKV 220
GQLG T S+A+V P++
Sbjct: 325 GQLG----TKSTANVNSPQL 340
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
I QV + H++ V DG+++S G G+LG + P + + +
Sbjct: 36 IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEPV-----DGLEAHNITQVA 90
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
H++ G VF G NS QLGL+ S + PTP SL + Q ++ + CGR
Sbjct: 91 CGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMM--PTPKMVKSLATKQ-VVQIACGRS 147
Query: 184 HSVVYSSR-EVYTFGIHA-GQLG 204
HS+ ++ E+Y +G ++ GQLG
Sbjct: 148 HSMALTNVGEIYCWGSNSHGQLG 170
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 13/173 (7%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD 70
PI H+ + VY WG N+ LG G R P L SL+ + +
Sbjct: 191 PISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCG 250
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDH 128
H+ ++ DG V++ G G G+LG + ++ + P+K+ + +G + I + H
Sbjct: 251 MDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKV-----LELMGTTVTQICCGRCH 305
Query: 129 SV-FLMLSGSVFVCGLNSFHQLGLSPP-----PSHIVSPTPIPRSSLKSSQPL 175
++ F+ G ++ GL QLG P ++ P +S+K + L
Sbjct: 306 TLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLVIGPWETSNNSIKDVKDL 358
>gi|328350134|emb|CCA36534.1| BTB/POZ domain-containing protein 1 [Komagataella pastoris CBS
7435]
Length = 1419
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 64 IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAM 121
I Q+ + H + ++D G ++SCG G+LG S S K + F KDK + +
Sbjct: 260 IVQLSLSARHILLATNDECGNLFSCGFNNFGQLGDASTHSSKLFKPIEFFKDK---KIIL 316
Query: 122 ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTP---IPRS----SLKSSQP 174
S DH++ + VF GLNS QLG + + P +PR K +
Sbjct: 317 TCSSNDHNIVISADNEVFTWGLNSDSQLGYEVAFNSFIQREPFSNVPRQVTTGDWKGFRN 376
Query: 175 LIGVCCGRFHSVVYSSREVYTFGIHAGQLGHS 206
LIG CC +VVYS +E++ +G + GQ G +
Sbjct: 377 LIGCCCSSKATVVYSRKELFLWGQNNGQFGFT 408
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTR---DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
E+Y WG+N LG S + + P L +L + + HS +S G V+
Sbjct: 163 ELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LGL E++ P +L K LGV + + SVFL G VF CG ++
Sbjct: 223 GRNNCGQLGLNDEANRAYPTQL---KTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAY 279
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGI-HAGQ 202
QLG S +PR ++ + V CG H+ +V S VY FG+ +GQ
Sbjct: 280 GQLG-----HGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQ 334
Query: 203 LGHSPVTVSSASVIEPKV 220
LG T S+ S++ P+V
Sbjct: 335 LG----TRSTKSLMLPQV 348
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y WG+ ++ LG G + + P + +++QV H++F++ +G+V++CG
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACG 65
Query: 88 HGQGGRLG--LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
+LG L ++ ++ P+ ++ V S HS+ L G V G N
Sbjct: 66 SNDHSQLGHELPTKRPLLIPELQDYV-------VIQISCGSRHSLALSEWGQVLSWGDND 118
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQL 203
QLG IV + R + S+ ++ + CG HS+ +S E+Y++G + GQL
Sbjct: 119 CGQLG-HATDKEIVQLPKVVRQLV--SKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 175
Query: 204 G-HSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
G +SP ++ + P T++ L G HSF S G FG G
Sbjct: 176 GVNSPKDLTHCNY--PLRLTTLLGIPLAAIAC----GGNHSFLISKS-GAVFGWG 223
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY G+N + LG R P L+ L+ + Q+ HS+ +S+ G+V S G
Sbjct: 60 KVYACGSNDHSQLGHELPTKR--PLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDN 117
Query: 90 QGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG ++ +V PK + K + +A + +HS+ L G ++ G N + Q
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGN---NHSLALTSCGELYSWGSNIYGQ 174
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
LG++ P P+ ++L PL + CG HS + S S V+ +G + GQLG
Sbjct: 175 LGVNSPKDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG 231
>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
[Pongo abelii]
Length = 932
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 20/168 (11%)
Query: 46 SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE-SSVVS 104
++ + VP L+ L + +I QV +H + ++ DG+ ++ G G+LGLG E S S
Sbjct: 3 TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQAS 62
Query: 105 PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS-----PPPSHIV 159
P+++ + + + +A + HS L LSG+VF G+N+ QLGLS P H+
Sbjct: 63 PQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV- 118
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGH 205
L +Q ++ + CG H+ V + S V+TFG + GQLGH
Sbjct: 119 --------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGH 158
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+ + WG N++ LG G + ++ P+ + SL+ + QV HS +S G V+ G
Sbjct: 39 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGM 98
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL E SP + + + V S ++H+ L SG VF G S+ Q
Sbjct: 99 NNAGQLGLSDEKDRESPCHVKLLRTQK---VVYISCGEEHTAVLTKSGGVFTFGAGSYGQ 155
Query: 149 LGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSVVY--SSREVYTFGIHA-GQLG 204
LG + PR L+ + + CGR H++ + SS +Y FG A GQLG
Sbjct: 156 LGHDSMNDEVN-----PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 93 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 152
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 153 YGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 207
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 208 QLG-TGHTCNVKCPSPV 223
>gi|410957218|ref|XP_003985228.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Felis catus]
Length = 932
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 20/168 (11%)
Query: 46 SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE-SSVVS 104
++ + VP L+ L + +I QV +H + ++ DG+ ++ G G+LGLG E S S
Sbjct: 3 TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS 62
Query: 105 PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS-----PPPSHIV 159
P+++ + + + +A + HS L LSG+VF G+N+ QLGLS P H+
Sbjct: 63 PQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV- 118
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGH 205
L +Q ++ + CG H+ V + S V+TFG GQLGH
Sbjct: 119 --------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 158
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+ + WG N++ LG G + ++ P+ + SL+ + QV HS +S G V+ G
Sbjct: 39 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGM 98
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL E SP + + + V S ++H+ L SG VF G S Q
Sbjct: 99 NNAGQLGLSDEEDRESPCHVKLLRTQK---VVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 155
Query: 149 LGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSVVY--SSREVYTFGIHA-GQLG 204
LG + PR L+ + + CGR H++ + SS +Y FG A GQLG
Sbjct: 156 LGHDSMNDEVN-----PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 93 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 152
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 153 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 207
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 208 QLG-TGHTCNVKCPSPV 223
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N N LG G+ R P L S+ QV + HS+ ++DDGRV++ G
Sbjct: 91 VWAWGDNTNGQLGDGTTTGRQTPTPAQGL--PSVAQVSAGESHSLALTDDGRVFAWGLNS 148
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ + +P ++ + V A +HS+ L G VF G NS QLG
Sbjct: 149 SGQLGDGTTADSRTPVQVQGLATDSTIKVVAA--GGNHSLALTSDGRVFAWGKNSSGQLG 206
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLGHSPV 208
+ S + S P+ L ++ + V G HS+ +S +Y +G++ +GQLG
Sbjct: 207 NN---STVDSSIPVQVQGLPAN--VTAVAAGGNHSLALTSDGRIYAWGLNSSGQLGDGTT 261
Query: 209 TVSSASVI 216
+ SS V+
Sbjct: 262 SNSSTPVL 269
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 11/176 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N++ LG S +P + L A++ V HS+ ++ DGR+++ G
Sbjct: 194 VFAWGKNSSGQLGNNSTVDSSIPVQVQGLP-ANVTAVAAGGNHSLALTSDGRIYAWGLNS 252
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ S+ +P + K S +DHS+ LM G+V+ G NS+ QLG
Sbjct: 253 SGQLGDGTTSNSSTPVLVAGLPAGSK--PVAVSAGKDHSLALMQDGTVYAWGGNSYGQLG 310
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
+ S P+ + L + + V G S+ +S VY +G++ +GQLG
Sbjct: 311 NG---TTTASEMPVQVTGLAN---VTAVSAGGSDSLALTSDGYVYAWGLNSSGQLG 360
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 57/187 (30%), Positives = 82/187 (43%), Gaps = 20/187 (10%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ D VW+ G G+LG G+ + +P + VA S + HS+ L
Sbjct: 81 HSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPA-----QGLPSVAQVSAGESHSLAL 135
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
G VF GLNS QLG S TP+ L + + V G HS+ +S
Sbjct: 136 TDDGRVFAWGLNSSGQLGDGTTAD---SRTPVQVQGLATDSTIKVVAAGGNHSLALTSDG 192
Query: 192 EVYTFGIH-AGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSL 250
V+ +G + +GQLG++ SS V +VQ LP + G HS A TS
Sbjct: 193 RVFAWGKNSSGQLGNNSTVDSSIPV---QVQG------LPANVTAVAAGGNHSL-ALTSD 242
Query: 251 GPEFGGG 257
G + G
Sbjct: 243 GRIYAWG 249
Score = 38.1 bits (87), Expect = 4.0, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
Q VY WG N+ LG G+ ++P + L A++ V S+ ++ DG V++
Sbjct: 294 QDGTVYAWGGNSYGQLGNGTTTASEMPVQVTGL--ANVTAVSAGGSDSLALTSDGYVYAW 351
Query: 87 GHGQGGRLGLGSESSVVSPKKL 108
G G+LG G+ S+ +P ++
Sbjct: 352 GLNSSGQLGDGTTSNRNTPVRV 373
>gi|402869930|ref|XP_003898996.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Papio anubis]
Length = 932
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 20/168 (11%)
Query: 46 SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE-SSVVS 104
++ + VP L+ L + +I QV +H + ++ DG+ ++ G G+LGLG E S S
Sbjct: 3 TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS 62
Query: 105 PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS-----PPPSHIV 159
P+++ + + + +A + HS L LSG+VF G+N+ QLGLS P H+
Sbjct: 63 PQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV- 118
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGH 205
L +Q ++ + CG H+ V + S V+TFG GQLGH
Sbjct: 119 --------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 158
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+ + WG N++ LG G + ++ P+ + SL+ + QV HS +S G V+ G
Sbjct: 39 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGM 98
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL E SP + + + V S ++H+ L SG VF G S Q
Sbjct: 99 NNAGQLGLSDEKDRESPCHVKLLRTQK---VVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 155
Query: 149 LGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSVVY--SSREVYTFGIHA-GQLG 204
LG + PR L+ + + CGR H++ + SS +Y FG A GQLG
Sbjct: 156 LGHDSMNDEVN-----PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 93 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 152
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 153 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 207
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 208 QLG-TGHTCNVKCPSPV 223
>gi|332233512|ref|XP_003265946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Nomascus leucogenys]
Length = 932
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 20/168 (11%)
Query: 46 SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE-SSVVS 104
++ + VP L+ L + +I QV +H + ++ DG+ ++ G G+LGLG E S S
Sbjct: 3 TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS 62
Query: 105 PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS-----PPPSHIV 159
P+++ + + + +A + HS L LSG+VF G+N+ QLGLS P H+
Sbjct: 63 PQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV- 118
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGH 205
L +Q ++ + CG H+ V + S V+TFG GQLGH
Sbjct: 119 --------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 158
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+ + WG N++ LG G + ++ P+ + SL+ + QV HS +S G V+ G
Sbjct: 39 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGM 98
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL E SP + + + V S ++H+ L SG VF G S Q
Sbjct: 99 NNAGQLGLSDEKDRESPCHVKLLRTQK---VVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 155
Query: 149 LGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSVVY--SSREVYTFGIHA-GQLG 204
LG + PR L+ + + CGR H++ + SS +Y FG A GQLG
Sbjct: 156 LGHDSMNDEVN-----PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 93 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 152
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 153 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 207
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 208 QLG-TGHTCNVKCPSPV 223
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTR---DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
E+Y WG+N LG S + + P L +L + + HS +S G V+
Sbjct: 163 ELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LGL E++ P +L K LGV + + SVFL G VF CG ++
Sbjct: 223 GRNNCGQLGLNDETNRAYPTQL---KTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAY 279
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGI-HAGQ 202
QLG S +PR ++ + V CG H+ +V S VY FG+ +GQ
Sbjct: 280 GQLG-----HGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQ 334
Query: 203 LGHSPVTVSSASVIEPKV 220
LG T S+ S++ P+V
Sbjct: 335 LG----TRSTKSLMLPQV 348
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY G+N + LG R P L+ L+ I Q+ HS+ +SD G+V S G
Sbjct: 60 KVYACGSNDHSQLGHDLPTKR--PLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117
Query: 90 QGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG ++ ++ PK + K + +A + +HS+ L G ++ G N + Q
Sbjct: 118 DCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGN---NHSLALTSCGELYSWGSNIYGQ 174
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
LG++ P P+ ++L PL + CG HS + S S V+ +G + GQLG
Sbjct: 175 LGVNSPKDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG 231
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 24/235 (10%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y WG+ ++ LG G + + P + +++QV H++F++ +G+V++CG
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACG 65
Query: 88 HGQGGRLG--LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
+LG L ++ ++ P+ ++ + S HS+ L G V G N
Sbjct: 66 SNDHSQLGHDLPTKRPLLIPELQDYV-------IIQISCGSRHSLALSDWGQVLSWGDND 118
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQL 203
QLG + + P + + S+ ++ + CG HS+ +S E+Y++G + GQL
Sbjct: 119 CGQLGHATDKEIMQLPKVVRQ---LVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 175
Query: 204 G-HSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
G +SP ++ + P T++ L G HSF S G FG G
Sbjct: 176 GVNSPKDLTHCNY--PLRLTTLLGIPLAAIAC----GGNHSFLISKS-GAVFGWG 223
>gi|410110896|ref|NP_001258531.1| probable E3 ubiquitin-protein ligase HERC3 isoform 2 [Homo sapiens]
gi|397480081|ref|XP_003811324.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pan paniscus]
gi|426344935|ref|XP_004039159.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Gorilla gorilla gorilla]
gi|194382994|dbj|BAG59053.1| unnamed protein product [Homo sapiens]
Length = 932
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 20/168 (11%)
Query: 46 SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE-SSVVS 104
++ + VP L+ L + +I QV +H + ++ DG+ ++ G G+LGLG E S S
Sbjct: 3 TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS 62
Query: 105 PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS-----PPPSHIV 159
P+++ + + + +A + HS L LSG+VF G+N+ QLGLS P H+
Sbjct: 63 PQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV- 118
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGH 205
L +Q ++ + CG H+ V + S V+TFG GQLGH
Sbjct: 119 --------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 158
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+ + WG N++ LG G + ++ P+ + SL+ + QV HS +S G V+ G
Sbjct: 39 QFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGM 98
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL E SP + + + V S ++H+ L SG VF G S Q
Sbjct: 99 NNAGQLGLSDEKDRESPCHVKLLRTQK---VVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 155
Query: 149 LGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSVVY--SSREVYTFGIHA-GQLG 204
LG + PR L+ + + CGR H++ + SS +Y FG A GQLG
Sbjct: 156 LGHDSMNDEVN-----PRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 93 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 152
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 153 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 207
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 208 QLG-TGHTCNVKCPSPV 223
>gi|154293753|ref|XP_001547330.1| hypothetical protein BC1G_14103 [Botryotinia fuckeliana B05.10]
Length = 1586
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 77/249 (30%)
Query: 20 KIDVSSNQF---NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS------------- 63
KIDVS + +E++ +G+N N++LG G Q R PE + +LKR
Sbjct: 225 KIDVSEPESIDGDELFAFGSNKNFSLGFGDQDDRQYPERI-TLKRPDRLLFQFYENYLDS 283
Query: 64 ------------------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQG 91
I+ V + K S ++ D ++ CG G G
Sbjct: 284 IGNDNLVVGHENFPTTVSELPSMIQNRPIIIQDVVLSKLSSAVLTTDPESNLYMCGFGPG 343
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
GRLG G E++ + +N K V+ ++ Q+H++ + G +F G N++ QLG
Sbjct: 344 GRLGTGDETTRFNYVPVNQGGLAGK-KVSTVALGQNHTLAVSSEGEIFSWGTNTWGQLGY 402
Query: 152 SPPPSHIVSPTPIPRSSLKSSQP----------------LIGVCCGRFHSVVYSSREVYT 195
+ +PR +LK +P ++G+ HSV ++S ++
Sbjct: 403 N-----------LPRPALKDEEPFCTTPRQIFGPLKREIIVGIAASAIHSVAHTSSSLFC 451
Query: 196 FGIHAGQLG 204
+G + GQLG
Sbjct: 452 WGKNEGQLG 460
>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
cuniculus]
Length = 882
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 17/237 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ T + P + +LK +K V + H++ +++G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L +G +F+ G NS Q
Sbjct: 114 NNDGQLGLGDTEGRNTFYPISFFTSQHK--IKQLSAGSNTSAALTENGELFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLGHS 206
+GL V+ +P + +P+ + CG +HS V E+YTFG G+LG
Sbjct: 172 IGLKN-----VTNVCVPH-QVTIGKPISWISCGYYHSAFVTMDGELYTFGECENGKLG-- 223
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKG 263
+ +I K + R +P + + G H+ ++ FG G G+ G
Sbjct: 224 ---LPEELLINHKTPQLVTR--IPEKVIQVACGGGHTVVLTETIVYTFGLGQFGQLG 275
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 15/147 (10%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS++++ P K L EK V +
Sbjct: 42 CGDE-HTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEK------VKYVAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFH 184
++H++ G+V+ G N+ QLGL T P S S + + G
Sbjct: 95 GRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGR---NTFYPISFFTSQHKIKQLSAGSNT 151
Query: 185 SVVYSSR-EVYTFGIHA-GQLGHSPVT 209
S + E++ +G ++ GQ+G VT
Sbjct: 152 SAALTENGELFMWGDNSEGQIGLKNVT 178
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 110/241 (45%), Gaps = 25/241 (10%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLASSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 HSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEFGGGWTGKK 262
H S S P + II + E + G+ H+ + + FGGG GK
Sbjct: 545 HG----DSNSRNIPTLVKDIIN------VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 594
Query: 263 G 263
G
Sbjct: 595 G 595
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4105 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4164
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H+V + GS V+ G + +
Sbjct: 4165 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGK 4221
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + + CG +F + VYTFG
Sbjct: 4222 LGLG-------------NSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 4267
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + ++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--INVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 55/208 (26%)
Query: 37 NANY-NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGHGQGGRL 94
N +Y LG G+ + +PE + +L+ I QV H+V VS DG VW+ G G G+L
Sbjct: 4163 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKL 4222
Query: 95 GLGSESSVVSPKKLN-------------------FEKD-------KDKL----------- 117
GLG+ ++ SP+K++ KD +D+L
Sbjct: 4223 GLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4282
Query: 118 ----------GVAMASIS--QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
GV + I+ +H++ L +G V+ G NS QLGL +H+ PT +
Sbjct: 4283 NRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG-HTNHVREPTLV- 4340
Query: 166 RSSLKSSQPLIGVCCGRFHSVVYSSREV 193
++ + + + GR HS +++ V
Sbjct: 4341 --TVLQGKNVRQISAGRCHSAAWTAPPV 4366
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 42 LGTGSQQTRDVPELLDSLKRASIKQV---CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGS 98
LG G+ V ++ +L+ + Q+ C HS+ +++ G V+S G G G+LG G+
Sbjct: 4062 LGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN 4121
Query: 99 ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHI 158
P+++ + ++ V S HS + G +F G + +LGL +
Sbjct: 4122 SDRQRRPRQIEALQGEE---VVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKK 4178
Query: 159 VSPTPIPRSSLKSSQPLIG-VCCGRFHSVVYSS--REVYTFG 197
+ P ++L+ Q IG V CG H+V S+ V+ FG
Sbjct: 4179 L---PERVTALEGYQ--IGQVACGLNHTVAVSTDGSMVWAFG 4215
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 99/238 (41%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + +P S A +QV + + + +G V +CG G
Sbjct: 4001 DVYLWGAGRHGQLAEAGRNVM-IPAAAPSFSPA--QQVVCGQNCTFVIQANGTVLACGEG 4057
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4058 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4117
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV + +++TFG G G +
Sbjct: 4118 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTADGKLFTFG--NGDYGRLGL 4171
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSFTAET--SLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ T S+ FG G GK G
Sbjct: 4172 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLG 4223
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|190346647|gb|EDK38784.2| hypothetical protein PGUG_02882 [Meyerozyma guilliermondii ATCC
6260]
Length = 1429
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 45/242 (18%)
Query: 11 PIDHLIRDRKIDVSSNQF--------NEVYIWGTNANYNLGTGSQ-----------QTRD 51
PI R RK ++ N +++Y+ G+N NY LG G + D
Sbjct: 160 PIIQQFRLRKSNIDFNHIWWDDARGGSDLYMSGSNKNYTLGLGDTSEVANPSKVPFEHFD 219
Query: 52 VPE----LLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG-QGGRLGLGSESSVVSPK 106
P+ + D L R KQV + K +++ ++ D R++S G G + GR GSE+ +P
Sbjct: 220 FPKRGSTIRDRLHRPRFKQVGISKNYTLVLTTDMRLYSSGLGTRRGRSDHGSENHK-NPY 278
Query: 107 KLNFEKDKDK----------LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPP- 155
+ N D +GV +IS +HS+ L + V+ G N+F QLG S
Sbjct: 279 RFNPIVIDDLANGPLASSSIMGVEKFAISDNHSLILANNNCVYAFGSNTFGQLGTSSTIR 338
Query: 156 -----SHIVSPTPIPRSS--LKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG--HS 206
+ PTP+P + ++ +P++G+ SV +S ++ +G++ GQ+G H
Sbjct: 339 SLSSSNEDYEPTPVPVAGDLRRNFEPILGLAVSEVSSVAWSENSLFFWGLNTGQMGIPHD 398
Query: 207 PV 208
P
Sbjct: 399 PT 400
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 12/244 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V + Q + VY+WG N LG +P +SL + + VS +G+
Sbjct: 2903 VETPQHSAVYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGSKTLFVVSQEGK 2962
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
+++CG G GRLGLG + + PK + F VA+ S + H++ L G VF G
Sbjct: 2963 LYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGK-HALALTQDGRVFSWG 3021
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HA 200
+LG S + P I SLKS + + V CG HS + SS E+YT+G+
Sbjct: 3022 EGEDGKLG-HGNCSSLDKPRLI--ESLKSKR-IRDVACGSGHSAAITSSGELYTWGLGEY 3077
Query: 201 GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTG 260
G+LGH + + ++PK+ +++ + + S + TA+ S+ +G G G
Sbjct: 3078 GRLGHG----DTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY-SWGDGDFG 3132
Query: 261 KKGK 264
K G+
Sbjct: 3133 KLGR 3136
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 5/189 (2%)
Query: 18 DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFV 77
D K ++ + + VY WG LG G + + P+L++SL +I + +S +
Sbjct: 514 DGKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAAL 573
Query: 78 SDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS 137
S +G +++ G G GRLG G+ V+ P ++ + VA S ++ + SG
Sbjct: 574 SSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGS-GDSQTLCVTASGI 632
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
VF G + +LG S TP L C G+F + + + EVYT+G
Sbjct: 633 VFSWGDGDYGKLGRGGCNG---SKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWG 689
Query: 198 I-HAGQLGH 205
A +LGH
Sbjct: 690 KGEAYRLGH 698
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 57/227 (25%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G++ + D P+L++ L I V HS ++ G +++ G G+
Sbjct: 4004 VYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGR 4063
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS-------ISQDHSVF------------ 131
GRLG G ++PK + +D + VA S ++ D +V+
Sbjct: 4064 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4123
Query: 132 --------------------------------LMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
L SGS++ G +H+LG H+
Sbjct: 4124 GGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLG-HGTDDHVR 4182
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
P + ++L+ + +I + G H V S + EV+T+G + GQLG
Sbjct: 4183 RPRKV--AALQGKK-IISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4226
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 9/161 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG LG G P+++D L ++ +V S ++ G V++ G G+
Sbjct: 633 VFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGE 692
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
RLG G+E V PK + K K + + S+ H + L V+ G N + Q
Sbjct: 693 AYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSL---HVLALTEDQLVYGWGRNDYGQ-- 747
Query: 151 LSPPPSHIVS-PTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
+ P IVS PT P S K+ +IG+ CG S + +
Sbjct: 748 IDPALGTIVSEPTLCPTLSGKN---VIGLVCGPTQSFAWCT 785
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCG 87
+ V+ WG LG G VP ++SL + +V C +F SV ++ G +++ G
Sbjct: 4108 DNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQF-SVALTRSGSIYTWG 4166
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G RLG G++ V P+K+ + K + +A S+ H V G VF G N
Sbjct: 4167 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSL---HCVACSDKGEVFTWGDNDEG 4223
Query: 148 QLG-------LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
QLG P H + I R V CG H++ +S+
Sbjct: 4224 QLGDGTTCALQRPRLVHALQGKKITR-----------VACGSAHTLAWST 4262
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+ EVY WG Y LG G+++ P+ +++LK +K++C+ H + +++D V+ G
Sbjct: 682 YGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWG 741
Query: 88 HGQGGRL 94
G++
Sbjct: 742 RNDYGQI 748
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
VY WG LG G P L+D L + Q+ C +F S+ ++ G VW+ G G
Sbjct: 3123 VYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQF-SLALTKYGEVWTWGKG 3181
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
RLG G++ V P + + K + VA+ ++ H + + +G V+ G N Q
Sbjct: 3182 DYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGAL---HCLAVTDTGQVYAWGDNDHGQQ 3238
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY--------SSREVYTFGIHAG 201
G S IV+ P L ++ + V CG HS+ + +++E TF
Sbjct: 3239 GNG---STIVNKKPSLVHELDDAR-VNRVSCGSSHSIAWVLTDQPAANNQEPVTFPTAKD 3294
Query: 202 QLGHS 206
LG +
Sbjct: 3295 PLGQA 3299
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 13/156 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDK--FHSVFVSDDGRVWSCG 87
+VY G A LG G + +P LL+S++ +K+V ++ H + +S +G V+S G
Sbjct: 3949 KVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWG 4008
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNS 145
G G+LG G+ S PK + ++ LG + ++ HS + +G ++ G
Sbjct: 4009 EGDDGKLGHGNRLSYDRPKLI-----EELLGTEIVDVACGGHHSAAITSAGWLYTWGKGR 4063
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
+ +LG + TP +L+ + +I V CG
Sbjct: 4064 YGRLGHGDSEDQL---TPKLVEALQDYK-VIDVACG 4095
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ ++ ++ EV+ WG + LG G+ P L++ L+ + V + H + V+D
Sbjct: 3164 QFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTD 3223
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
G+V++ G G+ G G S + KK + + D V S HS+ +L+
Sbjct: 3224 TGQVYAWGDNDHGQQGNG---STIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3276
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG N LG +P L +SL Q+ + V+ DG+V++ G+G
Sbjct: 3898 IYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGA 3957
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG+G SV+ P L + VA+ S + H + L G V+ G +LG
Sbjct: 3958 VGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGK-HCLALSSEGHVYSWGEGDDGKLG 4016
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGH 205
+ + P L ++ ++ V CG HS + S+ +YT+G G+LGH
Sbjct: 4017 HG---NRLSYDRPKLIEELLGTE-IVDVACGGHHSAAITSAGWLYTWGKGRYGRLGH 4069
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ V+ + +Y WG + LG G+ P + +L+ I + H V SD
Sbjct: 4151 QFSVALTRSGSIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSD 4210
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
G V++ G G+LG G+ ++ P+ ++ + K VA S
Sbjct: 4211 KGEVFTWGDNDEGQLGDGTTCALQRPRLVHALQGKKITRVACGS 4254
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N+ LG G + R L+ K+ IKQ+ + S +++DG++ G
Sbjct: 108 VYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDN 167
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GLG ++ V P +++ K V+ S HS + G ++ G +L
Sbjct: 168 SEGQIGLGDKAYVSVPHQVDIGKP-----VSCISCGYYHSALITQDGELYTFGEPENGKL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLGHSPV 208
GLSP + +P+ S + V CG H+VV + +VYTFG+ GQLGH
Sbjct: 223 GLSPKQ---LKNHKLPQLVSGISGKVSKVACGGGHTVVLAEGDVYTFGLGQYGQLGHGTF 279
Query: 209 TVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKG 263
++ EPK + + + N + E L FG G GK G
Sbjct: 280 VFETS---EPKTVDHLGKHKICHIACGENHT---ALITENGLMYTFGDGRHGKLG 328
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y++G+N LG GS+ + P + +LK +K + H++ ++ G V++ G
Sbjct: 56 LYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHTLICTEQGNVYAAGGNS 115
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLG-VAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG + ++F + K+ +A S + S L G + + G NS Q+
Sbjct: 116 EGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYT---SAVLTEDGQLVMWGDNSEGQI 172
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHSP 207
GL +++ P + +P+ + CG +HS + + E+YTFG G+LG SP
Sbjct: 173 GLG-DKAYVSVPHQV-----DIGKPVSCISCGYYHSALITQDGELYTFGEPENGKLGLSP 226
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+++G+++ G G+LG GS+++V P K L EK V +A+
Sbjct: 42 CGDE-HTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G NS QLGL
Sbjct: 95 GRNHTLICTEQGNVYAAGGNSEGQLGL 121
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 30 EVYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+VY +G LG G+ +T + P+ +D L + I + + H+ ++++G +++ G
Sbjct: 262 DVYTFGLGQYGQLGHGTFVFETSE-PKTVDHLGKHKICHIACGENHTALITENGLMYTFG 320
Query: 88 HGQGGRLGLGSES 100
G+ G+LGLG E+
Sbjct: 321 DGRHGKLGLGEEN 333
>gi|403333599|gb|EJY65911.1| hypothetical protein OXYTRI_13931 [Oxytricha trifallax]
Length = 1207
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV----PELL--DSLKRASIKQVCMDKFHSVFVSDDGRV 83
EVY WG+N N G+G+ V P+++ D +R IKQ+ FHS FV + GR+
Sbjct: 173 EVYSWGSNENGQCGSGASPFHTVVQWAPKIVKFDDYQRPFIKQIDSGAFHSGFVDEIGRL 232
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
+ CG G G+LG S +SP F K + + DH+V L +G ++ G
Sbjct: 233 FMCGKGDQGQLGNMSYQDELSP----FYISKIPEKIQEVACGDDHTVVLTRNGEIYTMGS 288
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQL 203
NS QLG P S S P+ L + + + G+F + + ++Y +G G
Sbjct: 289 NSRGQLGTGPSSSR-GSNVPVLLQELNFIR-MTRIRAGQFSASLSVDNQLYLWG--CGTF 344
Query: 204 GH--SPVTVSSASVIE 217
G +P V S +E
Sbjct: 345 GEFFTPHRVKSVQNLE 360
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 58/147 (39%), Gaps = 12/147 (8%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQ-----QTRDVPELLDSLKRASIKQVCMDKFHS 74
K V + EV+ WG++ LG G Q Q VP I QV HS
Sbjct: 54 KSQVQGGDYTEVFSWGSDKFGQLGLGKQISSQKQFHMVPRFCSY--NIPITQVSCGTSHS 111
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGS--ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
VF++ ++S G G+LG+ SP + + + + S +H++ L
Sbjct: 112 VFITSSQLIYSMGSNLQGQLGIDDPYTQQKSSPVLVELLVNHKPIQI---SCGNNHTLAL 168
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIV 159
M G V+ G N Q G P H V
Sbjct: 169 MRDGEVYSWGSNENGQCGSGASPFHTV 195
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 25/164 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTR--DVPELLDSLKRASIKQVCMDKFH-SVFVSDDGRVWSC 86
E+Y G+N+ LGTG +R +VP LL L + ++ +F S+ V + +W C
Sbjct: 282 EIYTMGSNSRGQLGTGPSSSRGSNVPVLLQELNFIRMTRIRAGQFSASLSVDNQLYLWGC 341
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML---SGSVFVCGL 143
G + +P ++ K + +A S FL + GSV+ G+
Sbjct: 342 G----------TFGEFFTPHRV-----KSVQNLELADFQLGKSGFLTVLTRQGSVYTWGI 386
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV 187
N QLGL I TP +L + + + CGR + +
Sbjct: 387 NDMGQLGLR---DSIQRSTPHRVEALDGKR-VTQITCGRDYVIA 426
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 10/179 (5%)
Query: 30 EVYIWGTNANYNLGTG-SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EVY WG N G G + + + +P+ L++LK I Q+ FH+ ++ DG +WS G
Sbjct: 163 EVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGE 222
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ GRLG G+E + V+P + + + V + HS + G V G Q
Sbjct: 223 GKFGRLGQGNEKNQVTPCCV---EGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQ 279
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGH 205
LG + V P +L+ + ++ V CG H+V S +V+TFG G+LGH
Sbjct: 280 LGHGDKTNRTV---PCLVKALEGA-GIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGH 334
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V+ WG + LG + VP L+ +L SIKQV +H+ +SD G +W+ G G
Sbjct: 59 DVWSWGRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGG 118
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G+E +P ++ ++ +A S H+ L+ G V+ G
Sbjct: 119 MYGKLGHGNEVGHPAPCRVEAFIGREVEQIACGS---RHTAALLAGGEVYCWGDRENGVC 175
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
G+ H P + +LK + CG + + ++++G
Sbjct: 176 GIGEAAEHQYLPKKL--EALKGVKITQIAACGFHTAAITQDGALWSWG 221
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG + G GS +++P ++ LK ++ Q+ H+V +++D VWS G G
Sbjct: 8 LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGD 67
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG P ++ K + + H+ + +G+++ G + +LG
Sbjct: 68 DGRLGHADNHWKYVPHLVSALTGKS---IKQVTCGSYHTAAISDTGALWTWGGGMYGKLG 124
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
H P P + + C R + + + EVY +G
Sbjct: 125 HGNEVGH---PAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWG 168
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
Q ++ WG LG G+++ + P ++ L+ +KQV FHS V++DG V +
Sbjct: 213 QDGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTF 272
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+ G+LG G +++ P + K + G+ + H+V L G VF G
Sbjct: 273 GGGEHGQLGHGDKTNRTVPCLV---KALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDH 329
Query: 147 HQLG 150
+LG
Sbjct: 330 GKLG 333
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V +G + LG G + R VP L+ +L+ A I QV H+V +S+DG+V++ G+G
Sbjct: 268 DVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNG 327
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
G+LG G+ + PK + + + VA + +H+V L
Sbjct: 328 DHGKLGHGANAKSALPKLV---ESLANMKVAKVASYNEHTVAL 367
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 380 EVYVWGSNSSHQLVEGTQEKILQPKLASSF--ADAQTIEAGQYCTFVISSDGSVRACGKG 437
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 438 SYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 497
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVC--CGRFHSVVYSSR-EVYTFGI-HAGQLG 204
G H S T P+ Q + VC G HS S E+YT+G G+LG
Sbjct: 498 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLG 551
Query: 205 H 205
H
Sbjct: 552 H 552
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 538 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 595
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 596 GDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 650
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 651 LGCGSSEATALRPKLIEE---LATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 707
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 708 N---STGPITKPK 717
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4177 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4236
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSG-SVFVCGLNSFHQ 148
GRLGLG+ S+ P+K+ + V + +H++ + G V+ G + +
Sbjct: 4237 DYGRLGLGNTSNKKLPEKVTA---LEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGK 4293
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + +V+TFG
Sbjct: 4294 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFG 4339
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ + QV H++ VS DG VW+ G
Sbjct: 4229 KLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGD 4288
Query: 89 GQGGRLGLGSESSVVSPKKLN--------------------------FEKDKDKL----- 117
G G+LGLG+ ++ SP+K++ F +D+L
Sbjct: 4289 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPE 4348
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
G+ + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4349 GRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLG-HTNHVR 4407
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + ++L+ + + GR HS +++ V
Sbjct: 4408 EPTLV--TTLQGKN-IHQISAGRCHSAAWTAPSV 4438
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 12/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV---CMDKFHSVFVSDDGRVWSCG 87
V G + LG G+ V ++ +L+ + Q+ C HS+ +++ G V+S G
Sbjct: 4123 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4182
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G G+LG G+ P+++ + ++ V S HS + G +F G +
Sbjct: 4183 DGDYGKLGHGNSDRQRRPRQIEALQGEE---VVQMSCGFKHSAVVTADGKLFTFGNGDYG 4239
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIG-VCCGRFHSVVYSSREVYTFGIHAGQLG 204
+LGL S +P +G V CG H++V S+ + + G G
Sbjct: 4240 RLGLGN-----TSNKKLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYG 4292
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V++WG + L + VP + S +A +QV + + + +G V +CG G
Sbjct: 4073 DVFLWGAGRHGQLAEAGRNIL-VPTIAPSFSQA--QQVVCGQNCTFVIQPNGTVLACGEG 4129
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4130 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4189
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV + +++TFG G G +
Sbjct: 4190 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTADGKLFTFG--NGDYGRLGL 4243
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + KV A L G+ + + G H+ +A+ + FG G GK G
Sbjct: 4244 GNTSNKKLPEKVTA------LEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLG 4295
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 590 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 647
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ V SI H + L V+ G NS
Sbjct: 648 --GACLGCGSSEATALRPKLI---EELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMG 702
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 703 QCGQGNSTGPITKPKKV 719
>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
Length = 710
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y +G+N LG G +T P + SLK K V + H++ + DG+V+ G G
Sbjct: 56 LYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGS 115
Query: 91 GGRLGLGSESS-VVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG +++ P L+F D + V+ H+ + G+++ G + +L
Sbjct: 116 EGQLGLGEDTTECTEPTLLDF--DSKAISVSCGYY---HTAVVTEDGNLYTFGETEYGKL 170
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHA-GQLGH 205
GL+ S TP + +K + VC G + + S VYTFG A GQLGH
Sbjct: 171 GLN-NSDLDSSDTPQKVTGIKEKVKFV-VCGGGHTTAIAESGAVYTFGNGASGQLGH 225
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+VY+WG + LG G T P LLD +A V +H+ V++DG +++ G
Sbjct: 107 KVYVWGGGSEGQLGLGEDTTECTEPTLLDFDSKAI--SVSCGYYHTAVVTEDGNLYTFGE 164
Query: 89 GQGGRLGLGSE--SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
+ G+LGL + S +P+K+ K+K K V H+ + SG+V+ G +
Sbjct: 165 TEYGKLGLNNSDLDSSDTPQKVTGIKEKVKFVVCGGG----HTTAIAESGAVYTFGNGAS 220
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLG 204
QLG S + SPTP + + C F +V+ +YTFG G+LG
Sbjct: 221 GQLGHG--NSLLESPTPHRVERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLG 277
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 67 VCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMAS 123
C D+ H+ V+++GR+++ G G+LGLG + P K L EK K + +
Sbjct: 41 ACGDE-HTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAK------LVA 93
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
+ H++ G V+V G S QLGL + PT + S I V CG +
Sbjct: 94 CGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDS-----KAISVSCGYY 148
Query: 184 HS-VVYSSREVYTFG-IHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTK 241
H+ VV +YTFG G+LG + + S+ + + T I+E + F G
Sbjct: 149 HTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQ---KVTGIKEKVK---FVVCGGGH 202
Query: 242 HSFTAETSLGPEFGGGWTGKKG 263
+ AE+ FG G +G+ G
Sbjct: 203 TTAIAESGAVYTFGNGASGQLG 224
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG G+ P + +L IKQ+ H + V+ +G V S G
Sbjct: 77 EVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRN 136
Query: 90 QGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G+LGLG + P+K+ FE + + M + +H+ + G ++ G +
Sbjct: 137 QNGQLGLGDTEDSLVPQKIQAFEGIR----IKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 192
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHS 206
LGL +V R + + + V CG H++ V S +YT+G GQLGH
Sbjct: 193 LGLGDRTDRLVP----ERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG 248
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
+ +I K++A FI + + G +H+ A TS G +G GW
Sbjct: 249 DL---EDHLIPHKLEALS-----NSFISQISGGWRHTM-ALTSDGKLYGWGWN 292
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+S + +Y +G + LG G + +P L++L + I Q+ H++ ++ DG+
Sbjct: 226 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGK 285
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G+G+ SP ++ F D+ V S H++ + +VF G
Sbjct: 286 LYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWG 342
Query: 143 LNSFHQLGL 151
+ QLG+
Sbjct: 343 RGTNGQLGI 351
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 104/233 (44%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG G+ P + +L IKQ+ H + V+ +G V S G
Sbjct: 88 EVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRN 147
Query: 90 QGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G+LGLG +E S+V K FE + + M + +H+ + G ++ G +
Sbjct: 148 QNGQLGLGDTEDSLVPQKIQAFEGIR----IKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHS 206
LGL +V R + + + V CG H++ V S +YT+G GQLGH
Sbjct: 204 LGLGDRTDRLVP----ERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG 259
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
+ +I K++A FI + + G +H+ A TS G +G GW
Sbjct: 260 DL---EDHLIPHKLEALS-----NSFISQISGGWRHTM-ALTSDGKLYGWGWN 303
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+S + +Y +G + LG G + +P L++L + I Q+ H++ ++ DG+
Sbjct: 237 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGK 296
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G+G+ SP ++ F D+ V S H++ + +VF G
Sbjct: 297 LYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWG 353
Query: 143 LNSFHQLGL 151
+ QLG+
Sbjct: 354 RGTNGQLGI 362
>gi|118100936|ref|XP_417522.2| PREDICTED: protein RCC2 [Gallus gallus]
Length = 464
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +PK + + + +A+ ++H++ L
Sbjct: 103 HSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSE---AIVLAACGRNHTLAL 159
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSV+ G N QLGL + SPT I + + QP+ + CG S++ +
Sbjct: 160 TETGSVYAFGENKMGQLGLGNQTDAVPSPTQI----MYNGQPITKMACGAEFSMIMDCKG 215
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 216 NLYSFGCPEYGQLGHN 231
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P+L++ L +I + H++ +++ G V++ G
Sbjct: 112 KLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAIVLAACGRNHTLALTETGSVYAFGEN 171
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 172 KMGQLGLGNQTDAVPSPTQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 227
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 228 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 287
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 288 DSQKRVFSWGFGGYGRLGHA 307
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 95 EVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ ++K+ V +A Q S+ ++ +G VFV G N Q
Sbjct: 155 NNSGQVGSGSTANQPIPRRVT-GCLQNKVVVNIAC-GQMCSMAVVNTGEVFVWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 213 LGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 206 --------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 269 NKSNQSYPTPVVVEKDRIIE 288
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 41 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKI--ACLSYGSGPHIVLATTEGEVFT 98
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ ++ + P ++ +K + VA S HS+ L G VF G N
Sbjct: 99 WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 155
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR + ++ ++ + CG+ S+ V ++ EV+ +G +
Sbjct: 156 NSGQVG-----SGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGN 210
Query: 201 GQLG 204
GQLG
Sbjct: 211 GQLG 214
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 64 IKQVCMDKFHS---VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
++Q C+ S ++ + + ++ G G LGLG S + P++L+ K ++
Sbjct: 21 VRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKIACLS 80
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCC 180
S H V G VF G N++ QLG + +V P S+ S++ +I V C
Sbjct: 81 YG--SGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLV---PYHISTNLSNKQVIEVAC 135
Query: 181 GRFHSVVYSSR-EVYTFGI-HAGQLG 204
G +HS+V +S EV+ +G ++GQ+G
Sbjct: 136 GSYHSLVLTSDGEVFAWGYNNSGQVG 161
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-----HSVFVSDDGRVW 84
E+Y WG+N LG Q +D+P L+ +I + + HS +S V+
Sbjct: 159 ELYSWGSNIYGQLGV--QSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVF 216
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
G G+LGL E + P +L K LGV + ++SVFL G VF CG
Sbjct: 217 GWGKNTCGQLGLNDEQNRAYPSQL---KSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAG 273
Query: 145 SFHQLGLSPPPSHIVSPTP-IPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGIHA 200
++ QLG H VS IPR ++ + V CG H+ +V S VY+FG+ A
Sbjct: 274 NYGQLG------HGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGA 327
Query: 201 -GQLGHSPVTVSSASVIEPKV 220
GQLG T ++ S PKV
Sbjct: 328 SGQLG----TRNTISQTLPKV 344
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 23/180 (12%)
Query: 83 VWSCGHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
++ G G+LGLG ++ P ++ F+ D V + H++FL +G V+
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSP---VQQIACGHRHTLFLTANGQVYA 59
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH 199
CG N HQLG P P PIP + +I + CG HS+ + ++ ++G +
Sbjct: 60 CGNNDHHQLGHELPTKR---PLPIPE---LQAYVVIQIACGSRHSMALTEWGQILSWGDN 113
Query: 200 -AGQLGHSPVTVSSASVIE-PKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
GQ+GHS + VIE PK I+R + + + G HS A TS G + G
Sbjct: 114 DCGQVGHS----TDNDVIELPK----ILRFLVSRTVVQIACGNNHSL-ALTSCGELYSWG 164
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY G N ++ LG R +P + L+ + Q+ HS+ +++ G++ S G
Sbjct: 56 QVYACGNNDHHQLGHELPTKRPLP--IPELQAYVVIQIACGSRHSMALTEWGQILSWGDN 113
Query: 90 QGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G +++ V+ PK L F + + +A + +HS+ L G ++ G N + Q
Sbjct: 114 DCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGN---NHSLALTSCGELYSWGSNIYGQ 170
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLG 204
LG+ P S P+ +++ PL + CG HS + S S V+ +G + GQLG
Sbjct: 171 LGVQSPKDLPHSNAPLRLTTILGI-PLATIACGGNHSFLISKSSAVFGWGKNTCGQLG 227
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+Y WG ++ LG G + + P ++ + ++Q+ H++F++ +G+V++CG+
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+LG + + + L + + + + +A S+ HS+ L G + G N Q
Sbjct: 63 NDHHQLG----HELPTKRPLPIPELQAYVVIQIACGSR-HSMALTEWGQILSWGDNDCGQ 117
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLG 204
+G S I P + S+ ++ + CG HS+ +S E+Y++G + GQLG
Sbjct: 118 VGHSTDNDVIELPKIL---RFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 172
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 48 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 107
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ + P+++ ++K+ V +A Q S+ ++ +G V+V G N Q
Sbjct: 108 NNSGQVGSGSTANQLIPRRVT-GCLQNKVVVNIA-CGQMCSMAVVNTGEVYVWGYNGNGQ 165
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 166 LGLGSSGNQ---PTPCRIAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 221
Query: 206 --------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 222 NKSNQSYPAPVVVEKDRIIE 241
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 18/177 (10%)
Query: 36 TNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWSCGHGQGG 92
TN LG G Q+ P L+SL I C+ H V + +G V++ GH
Sbjct: 1 TNCCGCLGLGDVQSTIEPRRLESLNGKKI--ACLSYGSGPHIVLATTEGEVFTWGHNAYS 58
Query: 93 RLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
+LG G+ + + P ++ +K VA S HS+ L G VF G N+ Q+G
Sbjct: 59 QLGNGTTNHGLVPCHISTNLSNKQVTEVACGSY---HSLVLTSDGEVFAWGYNNSGQVGS 115
Query: 152 SPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
+ + IPR + ++ ++ + CG+ S+ V ++ EVY +G + GQLG
Sbjct: 116 GSTANQL-----IPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 167
>gi|242074680|ref|XP_002447276.1| hypothetical protein SORBIDRAFT_06g031820 [Sorghum bicolor]
gi|241938459|gb|EES11604.1| hypothetical protein SORBIDRAFT_06g031820 [Sorghum bicolor]
Length = 552
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 28/202 (13%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ + + Y WG N LG G R++P ++ L + I + + + H+V V+DDG+
Sbjct: 84 VALDAEGKCYTWGRNEKGQLGHGDTLLRNLPTVVSQLSKYKIIKASVGRNHTVVVTDDGK 143
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ-----DHSVFL--MLS 135
+S GH + G+LG GS L E + + +A + D +V+L +
Sbjct: 144 SFSFGHNKHGQLGTGS---------LRNEIESSPVSCIVAEATNVVCGADFTVWLSSVEG 194
Query: 136 GSVFVCGLNSFHQLGLSPPPSH---------IVSPTPIPRS-SLKSSQPLIGVCCGRFHS 185
S+ GL + QLG + P P PR+ + S + ++ V CG H+
Sbjct: 195 SSILTAGLPQYGQLGHGTDNEYNAKESSVRLTYDPQPRPRAIAAFSGKTVVKVACGTNHT 254
Query: 186 V-VYSSREVYTFGIHA-GQLGH 205
V V SS VYT+G G+LGH
Sbjct: 255 VAVDSSGFVYTWGFGGYGRLGH 276
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 110/236 (46%), Gaps = 30/236 (12%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S F +VY WG + P+ + +L IKQ+ H + V+ DG V
Sbjct: 84 SESFTQVYSWGCDLF------------TPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQ 131
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
S G Q G+LGLG+ + P+K+ + + V M + +H+ + G ++ G
Sbjct: 132 SWGRNQNGQLGLGTTEDSLVPQKIQAFQ---GVSVKMVAAGAEHTAAVTEDGELYGWGWG 188
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ LGL +V P S+++ + ++ V CG H++ V SS +YT+G GQ
Sbjct: 189 RYGNLGLGDRNDRLV---PEKVSTVEGVK-MVKVACGWRHTISVSSSGGLYTYGWSKYGQ 244
Query: 203 LGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGW 258
LGH + K++A ++E+L I E + G +H+ A TS G +G GW
Sbjct: 245 LGHGDF---EDHLTPHKLEA--LQENL---ISEISGGWRHTM-ALTSDGKLYGWGW 291
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 9/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E+Y WG NLG G + R VPE + +++ + +V H++ VS G +++ G
Sbjct: 181 ELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWS 240
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G ++P KL E ++ L ++ S H++ L G ++ G N F Q+
Sbjct: 241 KYGQLGHGDFEDHLTPHKL--EALQENL-ISEISGGWRHTMALTSDGKLYGWGWNKFGQV 297
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLGH 205
G+ H SP + Q ++ + CG H++ + R+ V+++G GQLGH
Sbjct: 298 GVGDNVDH-CSPVQV---KFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGH 351
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 92/180 (51%), Gaps = 15/180 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV WG N N LG G+ + VP+ + + + S+K V H+ V++DG ++ G G
Sbjct: 129 EVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWG 188
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFH 147
+ G LGLG + + P+K++ + GV M ++ H++ + SG ++ G + +
Sbjct: 189 RYGNLGLGDRNDRLVPEKVSTVE-----GVKMVKVACGWRHTISVSSSGGLYTYGWSKYG 243
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF-HSVVYSSR-EVYTFGIHA-GQLG 204
QLG H+ TP +L+ + LI G + H++ +S ++Y +G + GQ+G
Sbjct: 244 QLGHGDFEDHL---TPHKLEALQ--ENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVG 298
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S EVY+WG+N + L G Q+ P+ S +QV +F + + DG V
Sbjct: 393 SGSCGEVYVWGSNCTHQLAEGGQEKITTPKY--SAVFTDCQQVEAGQFCTFLIYSDGTVG 450
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
+CG G GRLGLG ++ PKK F+K K ++ + S HS+ L +G V+ G
Sbjct: 451 ACGKGSYGRLGLGDSNNCSVPKKPLFDKKYVK-KISSSKGSDGHSLALTTTGEVYSWGDG 509
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG-----VCCGRFHS-VVYSSREVYTFGI 198
+ +LG +H S IP+ PL+G V G HS V E+YT+G
Sbjct: 510 DYGKLGHG---TH--STQKIPK---LVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGD 561
Query: 199 -HAGQLGH 205
G+LGH
Sbjct: 562 GEFGRLGH 569
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG +++ P + S++ S+ V H++ VS DG+ +WS G
Sbjct: 555 ELYTWGDGEFGRLGHDYTSSKNFPTKVQSIE--SVGLVACGGSHTLAVSQDGKTIWSFGG 612
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ G+LG G + + PK + + + L + + S+ + SG ++ G +
Sbjct: 613 GENGKLGHGDTNRQLKPKVI---EALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAI-- 667
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG-- 204
LG + P + S+ ++ + CG H + + EVY +G +A GQ G
Sbjct: 668 LGCGSAEYTALRPRLVED---LQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQG 724
Query: 205 --HSPVT 209
SP+T
Sbjct: 725 HAQSPIT 731
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG G+ P + +L IKQ+ H + V+ +G V S G
Sbjct: 89 EVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRN 148
Query: 90 QGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G+LGLG + P+K+ FE + + M + +H+ + G ++ G +
Sbjct: 149 QNGQLGLGDTEDSLVPQKIQAFEGIR----IKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 204
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHS 206
LGL +V R + + + V CG H++ V S +YT+G GQLGH
Sbjct: 205 LGLGDRTDRLVP----ERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG 260
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
+ +I K++A FI + + G +H+ A TS G +G GW
Sbjct: 261 DL---EDHLIPHKLEALS-----NSFISQISGGWRHTM-ALTSDGKLYGWGWN 304
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+S + +Y +G + LG G + +P L++L + I Q+ H++ ++ DG+
Sbjct: 238 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGK 297
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G+G+ SP ++ F D+ V S H++ + +VF G
Sbjct: 298 LYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWG 354
Query: 143 LNSFHQLGL 151
+ QLG+
Sbjct: 355 RGTNGQLGI 363
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 371 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 428
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 429 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 488
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 489 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 542
Query: 205 H 205
H
Sbjct: 543 H 543
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 529 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 586
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 587 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 641
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I L +++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 642 LGCGSSEATALRPKLI--EELAATR-IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 698
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 699 N---STGPITKPK 708
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 38/179 (21%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 3640 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 3699
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + +H++ + GS V+ G + +
Sbjct: 3700 DYGRLGLGNTSNKKLPERV--------------ACGLNHTLAVSADGSMVWAFGDGDYGK 3745
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 3746 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 3791
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ +G LG G+ + P+ +D L IK+V SV ++ DG V++ G +
Sbjct: 3735 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 3794
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQ 148
L G + P+++ GV + ++ +H++ L +G V+ G NS Q
Sbjct: 3795 LIGLPEGRARNHNRPQQVPVLA-----GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 3849
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
LGL +H+ PT + ++ + + + GR HS +++ V
Sbjct: 3850 LGLG-HTNHVREPTLV---TVLQGKNVRQISAGRCHSAAWTAPPV 3890
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 8/169 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3536 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 3592
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 3593 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 3652
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFG 197
G P +L+ + ++ + CG HS VV S +++TFG
Sbjct: 3653 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG 3697
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 581 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 638
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 639 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 693
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 694 QCGQGNSTGPITKPKKV 710
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV---CMDKFHSVFVSDDGRVWSCG 87
V G + LG G+ V ++ +L+ + Q+ C HS+ +++ G V+S G
Sbjct: 3586 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 3645
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G G+LG G+ P+++ + ++ V S HS + G +F G +
Sbjct: 3646 DGDYGKLGHGNSDRQRRPRQIEALQGEE---VVQMSCGFKHSAVVTSDGKLFTFGNGDYG 3702
Query: 148 QLGL 151
+LGL
Sbjct: 3703 RLGL 3706
>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
Length = 1152
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 93/185 (50%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L GS VP+L S S +Q+ ++ + + DG V +CG G
Sbjct: 365 EVYVWGSNSSHQLAEGSMDKILVPKLATSF--GSAQQIEAGQYCTFVIFPDGFVHACGKG 422
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ K+LNF+ + V+ + S H++ L L G V+ G + +L
Sbjct: 423 SYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALTLDGKVYSWGDGDYGKL 482
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIG---VCC---GRFHS-VVYSSREVYTFGI-HA 200
G H S T IP K + +G VCC G HS V E+YT+G
Sbjct: 483 G------HGNSQTQKIP----KLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDY 532
Query: 201 GQLGH 205
G+LGH
Sbjct: 533 GRLGH 537
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLD-SLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+VY WG LG G+ QT+ +P+L++ +L + + HS V++DG +++ G
Sbjct: 470 KVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGE 529
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSG-SVFVCGLNSFH 147
G GRLG G +S P ++ KD V + H+V + G +V+ G
Sbjct: 530 GDYGRLGHGDNNSRNVPVQV-----KDVANVGQVACGSAHTVCVSQDGQTVWSFGSGDNG 584
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLI--GVCCGRFHSVVYSSR-EVYTFGIHAGQLG 204
+LG S + + P I ++ Q ++ VCCG S+ +S +VY +G LG
Sbjct: 585 KLGHS-DTNRVYKPKVI-----EALQGMVIRKVCCGSQCSLALTSTGQVYVWGC-GPSLG 637
Query: 205 HSPVTVSSAS 214
V +SA+
Sbjct: 638 TGSVDATSAT 647
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 30 EVYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+VY+WG + LGTGS T P+LL +L+ S+ + + H V ++ D V++ G+
Sbjct: 626 QVYVWGCGPS--LGTGSVDATSATPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGN 683
Query: 89 GQGGRLGLG-SESSVVSPKKL 108
G+ G G + + PKK+
Sbjct: 684 NSMGQCGQGHCTTPITKPKKV 704
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG G+ P + +L IKQ+ H + V+ +G V S G
Sbjct: 88 EVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRN 147
Query: 90 QGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G+LGLG + P+K+ FE + + M + +H+ + G ++ G +
Sbjct: 148 QNGQLGLGDTEDSLVPQKIQAFEGIR----IKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHS 206
LGL +V R + + + V CG H++ V S +YT+G GQLGH
Sbjct: 204 LGLGDRNDRLVP----ERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG 259
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
+ +I K++A FI + + G +H+ A TS G +G GW
Sbjct: 260 DL---EDHLIPHKLEALS-----NSFISQISGGWRHTM-ALTSDGKLYGWGWN 303
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+S + +Y +G + LG G + +P L++L + I Q+ H++ ++ DG+
Sbjct: 237 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGK 296
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G+G+ SP ++ F D+ V S H++ + +VF G
Sbjct: 297 LYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWG 353
Query: 143 LNSFHQLGL 151
+ QLG+
Sbjct: 354 RGTNGQLGI 362
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG G+ P + +L IKQ+ H + V+ +G V S G
Sbjct: 77 EVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRN 136
Query: 90 QGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G+LGLG + P+K+ FE + + M + +H+ + G ++ G +
Sbjct: 137 QNGQLGLGDTEDSLVPQKIQAFEGIR----IKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 192
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHS 206
LGL +V R + + + V CG H++ V S +YT+G GQLGH
Sbjct: 193 LGLGDRTDRLVP----ERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG 248
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
+ +I K++A FI + + G +H+ A TS G +G GW
Sbjct: 249 DL---EDHLIPHKLEALS-----NSFISQISGGFRHTM-ALTSDGKLYGWGWN 292
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV WG N N LG G + VP+ + + + IK V H+ V++DG ++ G G
Sbjct: 129 EVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWG 188
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G LGLG + + P+++ + ++M + H++ + SG+++ G + + QL
Sbjct: 189 RYGNLGLGDRTDRLVPERVTSTGGEK---MSMVACGWRHTISVSYSGALYTYGWSKYGQL 245
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF-HSVVYSSR-EVYTFGIHA-GQLG 204
G H+ IP S I G F H++ +S ++Y +G + GQ+G
Sbjct: 246 GHGDLEDHL-----IPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVG 298
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+S + +Y +G + LG G + +P L++L + I Q+ H++ ++ DG+
Sbjct: 226 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGK 285
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G+G+ SP ++ F D+ V S H++ + +VF G
Sbjct: 286 LYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWG 342
Query: 143 LNSFHQLGL 151
+ QLG+
Sbjct: 343 RGTNGQLGI 351
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ ++K+ V +A Q S+ ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGSTANQPIPRRVT-GCLQNKVAVNIAC-GQMCSMAVVNTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGSSGNQ---PTPCRIAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 293 NKSNQSYPAPVIVEKDRIIE 312
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHIVLATTEGEVFT 122
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K VA S HS+ L G VF G N
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSY---HSLVLTSDGEVFAWGYN 179
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR + ++ + + CG+ S+ V ++ EVY +G +
Sbjct: 180 NSGQVG-----SGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGN 234
Query: 201 GQLG 204
GQLG
Sbjct: 235 GQLG 238
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI-- 100
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ + V
Sbjct: 101 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVTEV 157
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV I
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNI 210
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
VSSN E+ +G N LG Q + P+++D+L + + +H+V + DG
Sbjct: 621 VSSN--GELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGE 678
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
V+S G G+LGLG ++ +P + + + S H+V + G + G
Sbjct: 679 VYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWG 738
Query: 143 LNSFHQLGL-SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-H 199
N + QLG+ S + P+P SS + CG +HS++ S V FG +
Sbjct: 739 RNDYGQLGIGSKEHKNSAQFVPLPMSS-----KIKNASCGCYHSLILMSNGRVMVFGRNN 793
Query: 200 AGQLGHSPVTVSSASVIEP 218
GQLG T+SSA + P
Sbjct: 794 KGQLGAGARTLSSADLPLP 812
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H + V+ DG V+S G+ G+LGLGS S ++ + ++K + A++S HS +
Sbjct: 563 HMLAVASDGAVFSWGYNDRGQLGLGSTISKSHTPRM-IDSLREKYHITTAAVSYHHSAVV 621
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+G + G+N QLGL H +P + SSQ + CG +H+V +S
Sbjct: 622 SSNGELLTFGMNDCGQLGLD-HTQHQHTPQVV---DALSSQVVTKAACGLYHTVAATSDG 677
Query: 192 EVYTFGIH-AGQLG 204
EVY+FG + GQLG
Sbjct: 678 EVYSFGKNDYGQLG 691
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 77 VSDDGRVWSCGHGQGGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLM 133
V +DG V++CG + G+ G G+ E V+ + + + ++M + + +H + +
Sbjct: 512 VMNDGGVFTCGLNKSGQCGNGTFEERVIIATPV---RALSGIAISMVAAANGCEHMLAVA 568
Query: 134 LSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-E 192
G+VF G N QLGL S S TP SL+ + HS V SS E
Sbjct: 569 SDGAVFSWGYNDRGQLGLGSTISK--SHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGE 626
Query: 193 VYTFGIH-AGQLG-------HSPVTVSSAS 214
+ TFG++ GQLG H+P V + S
Sbjct: 627 LLTFGMNDCGQLGLDHTQHQHTPQVVDALS 656
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG G+ P + +L IKQ+ H + V+ +G V S G
Sbjct: 88 EVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRN 147
Query: 90 QGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G+LGLG + P+K+ FE + + M + +H+ + G ++ G +
Sbjct: 148 QNGQLGLGDTEDSLVPQKIQAFE----GIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHS 206
LGL +V R + + + V CG H++ V S +YT+G GQLGH
Sbjct: 204 LGLGDRTDRLVP----ERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG 259
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
+ +I K++A FI + + G +H+ A TS G +G GW
Sbjct: 260 DL---EDHLIPHKLEALS-----NSFISQISGGWRHTM-ALTSDGKLYGWGWN 303
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+S + +Y +G + LG G + +P L++L + I Q+ H++ ++ DG+
Sbjct: 237 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGK 296
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G+G+ SP ++ F D+ V S H++ + +VF G
Sbjct: 297 LYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWG 353
Query: 143 LNSFHQLGL 151
+ QLG+
Sbjct: 354 RGTNGQLGI 362
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HSV + V S G G+ G+LG G SP +L+ D + + DH+V
Sbjct: 26 HSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA---LDGHQIVSVTCGADHTVAY 82
Query: 133 MLSG-SVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR 191
SG V+ G F +LG TP+P +L + + + CG H + +
Sbjct: 83 SQSGMEVYSWGWGDFGRLGHGNSSDLF---TPLPIKALHGIR-IKQIACGDSHCLAVTME 138
Query: 192 -EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETS 249
EV ++G + GQLG + + S++ K+QA E +P I G +H+ A T
Sbjct: 139 GEVQSWGRNQNGQLG---LGDTEDSLVPQKIQAF---EGIP--IKMVAAGAEHT-AAVTE 189
Query: 250 LGPEFGGGW 258
G +G GW
Sbjct: 190 DGDLYGWGW 198
>gi|402874536|ref|XP_003901091.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 651
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPK 106
G G+LG G + V PK
Sbjct: 589 GDNGKLGHGDTNRVYKPK 606
>gi|410898904|ref|XP_003962937.1| PREDICTED: protein RCC2 homolog [Takifugu rubripes]
Length = 494
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 9/169 (5%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G + +PK + E D L VA A+ ++H++ L
Sbjct: 133 HSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLI--EGLADHLVVA-AACGRNHTLAL 189
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSR 191
+GSV+ G N QLG ++SP I QPL+ V CG F VV
Sbjct: 190 TDNGSVYSFGENKLGQLGQCSQTYAVLSPALISY----DGQPLVKVACGAEFSMVVDCKG 245
Query: 192 EVYTFGI-HAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRG 239
+Y+FG GQLGH+ A + II + FI +S G
Sbjct: 246 NLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDG 294
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P+L++ L + + H++ ++D+G V+S G
Sbjct: 142 KLWSWGRNEKGQLGHGDTKRLEAPKLIEGLADHLVVAAACGRNHTLALTDNGSVYSFGEN 201
Query: 90 QGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LG S++ +V+SP +++ D + + + S+ + G+++ G + Q
Sbjct: 202 KLGQLGQCSQTYAVLSPALISY----DGQPLVKVACGAEFSMVVDCKGNLYSFGCPEYGQ 257
Query: 149 LGLSPPPSHIVSPTP-------IPR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I IPR K Q + V CG H++V
Sbjct: 258 LGHNSDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDGQVMPVPNVVVRDVACGANHTLVL 317
Query: 189 SS-REVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 318 DSQKRVFSWGFGGYGRLGHA 337
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4099 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4158
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4159 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGK 4215
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4216 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4261
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ +G LG G+ + P+ +D L IK+V SV ++ DG V++ G +
Sbjct: 4205 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4264
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQ 148
L G + P+++ GV + ++ +H++ L +G V+ G NS Q
Sbjct: 4265 LIGLPEGRARNHNRPQQIPVLA-----GVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQ 4319
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
LGL +H+ PT + ++ + + + GR HS +++ V
Sbjct: 4320 LGLG-HTNHVREPTLV---TVLQGKNVRQISAGRCHSAAWTAPPV 4360
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3995 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4051
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4052 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4111
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4112 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4165
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +++ S+ FG G GK G
Sbjct: 4166 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLG 4217
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|60099075|emb|CAH65368.1| hypothetical protein RCJMB04_23b17 [Gallus gallus]
Length = 385
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +PK + + + +A+ ++H++ L
Sbjct: 168 HSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSE---AIVLAACGRNHTLAL 224
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSV+ G N QLGL + SPT I + + QP+ + CG S++ +
Sbjct: 225 TETGSVYAFGENKMGQLGLGNQTDAVPSPTQI----MYNGQPITKMACGAEFSMIMDCKG 280
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 281 NLYSFGCPEYGQLGHN 296
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P+L++ L +I + H++ +++ G V++ G
Sbjct: 177 KLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAIVLAACGRNHTLALTETGSVYAFGEN 236
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 237 KMGQLGLGNQTDAVPSPTQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 292
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 293 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 352
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 353 DSQKRVFSWGFGGYGRLGHA 372
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4094 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4153
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4154 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGK 4210
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4211 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4256
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV-WSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG V W+ G
Sbjct: 4146 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGD 4205
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4206 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4265
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4266 GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVR 4324
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + ++ + + + GR HS +++ V
Sbjct: 4325 EPTLV---TVLQGKNIRQISAGRCHSAAWTAPPV 4355
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPK 106
G G+LG G + V PK
Sbjct: 589 GDNGKLGHGDTNRVYKPK 606
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3990 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4046
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4047 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4106
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4107 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4160
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4161 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4212
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4087 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4146
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4147 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGK 4203
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4204 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4249
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV-WSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG V W+ G
Sbjct: 4139 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGD 4198
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4199 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4258
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4259 GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVR 4317
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + ++ + + + GR HS +++ V
Sbjct: 4318 EPTLV---TVLQGKNIRQISAGRCHSAAWTAPPV 4348
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPK 106
G G+LG G + V PK
Sbjct: 589 GDNGKLGHGDTNRVYKPK 606
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3983 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4039
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4040 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4099
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4100 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4153
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4154 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4205
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVC--CGRFHSVVYSSR-EVYTFGI-HAGQLG 204
G H S T P+ Q + VC G HS S E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4106 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNG 4165
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4166 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4222
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4223 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4268
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4158 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4217
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4218 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4277
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4278 GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVR 4336
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT I ++ + + + GR HS +++ V
Sbjct: 4337 EPTLI---TVLQGKNIRQISAGRCHSAAWTASPV 4367
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + +P S +A +QV + + + +G V +CG G
Sbjct: 4002 DVYLWGAGRHGQLAEAGRNVM-IPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4058
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4059 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4118
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + +I + CG HS VV S +++TFG G G +
Sbjct: 4119 GHGNSDRQ---RRPRQIEALQGEE-VIQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4172
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4173 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4224
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 154
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ ++K+ V +A Q S+ ++ +G V+V G N Q
Sbjct: 155 NNSGQVGSGSTANQPIPRRVT-GCLQNKVAVNIAC-GQMCSMAVVNTGEVYVWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 213 LGLGSSGNQ---PTPCRIAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 206 --------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 269 NKSNQSYPAPVIVEKDRIIE 288
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 41 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHIVLATTEGEVFT 98
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K VA S HS+ L G VF G N
Sbjct: 99 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSY---HSLVLTSDGEVFAWGYN 155
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR + ++ + + CG+ S+ V ++ EVY +G +
Sbjct: 156 NSGQVG-----SGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGN 210
Query: 201 GQLG 204
GQLG
Sbjct: 211 GQLG 214
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 21 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI-- 76
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ + V
Sbjct: 77 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVTEV 133
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV I
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNI 186
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
paniscus]
Length = 4798
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4039 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4098
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + + GS V+ G + +
Sbjct: 4099 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGK 4155
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4156 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4201
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4091 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGD 4150
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4151 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4210
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4211 GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4269
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4270 EPTLVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4300
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3935 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 3991
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 3992 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4051
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4052 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4105
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ + + S+ FG G GK G
Sbjct: 4106 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4157
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 30/185 (16%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4088 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4147
Query: 90 QGGRLGLGSESSVVSPKKL------NFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCG 142
GRLGLG+ S+ P+++ + ++K + + +H++ + GS V+ G
Sbjct: 4148 DYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFG 4207
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSRE 192
+ +LGL S+ KSS + V CG +F + +
Sbjct: 4208 DGDYGKLGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQ 4254
Query: 193 VYTFG 197
VYTFG
Sbjct: 4255 VYTFG 4259
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPK 106
G G+LG G + V PK
Sbjct: 589 GDNGKLGHGDTNRVYKPK 606
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 63/223 (28%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQ---------VCMDKFHSVFVSDD 80
+++ +G LG G+ + +PE + +L+ I Q V H++ VS D
Sbjct: 4140 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSAD 4199
Query: 81 GR-VWSCGHGQGGRLGLGSESSVVSPKKLN-------------------FEKD------- 113
G VW+ G G G+LGLG+ ++ SP+K++ KD
Sbjct: 4200 GSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFG 4259
Query: 114 KDKL---------------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
+D+L GV + ++ +H++ L +G ++ G NS QLG
Sbjct: 4260 QDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLG 4319
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
L +H+ PT + ++ + + + GR HS +++ V
Sbjct: 4320 LG-HTNHVREPTLV---TVLQGKNVRQISAGRCHSAAWTAPPV 4358
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 8/169 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3984 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4040
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4041 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4100
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFG 197
G P +L+ + ++ + CG HS VV S +++TFG
Sbjct: 4101 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG 4145
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 13/177 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV---CMDKFHSVFVSDDGRVWSCG 87
V G + LG G+ V ++ +L+ + Q+ C HS+ +++ G V+S G
Sbjct: 4034 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4093
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G G+LG G+ P+++ + ++ V S HS + G +F G +
Sbjct: 4094 DGDYGKLGHGNSDRQRRPRQIEALQGEE---VVQMSCGFKHSAVVTSDGKLFTFGNGDYG 4150
Query: 148 QLGLSPP-----PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS--REVYTFG 197
+LGL P + + ++ + V CG H++ S+ V+ FG
Sbjct: 4151 RLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFG 4207
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4218
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4219 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4154 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4213
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4214 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4273
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4274 GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4332
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4333 EPTLVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4363
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4055 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4114
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4115 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4168
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4169 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4216
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4217 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I L +++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLI--EELAATR-IVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 55/208 (26%)
Query: 37 NANY-NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGHGQGGRL 94
N +Y LG G+ + +PE + +L+ I QV H++ VS DG VW+ G G G+L
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4217
Query: 95 GLGSESSVVSPKKLN-------------------FEKD-------KDKL----------- 117
GLG+ ++ SP+K++ KD +D+L
Sbjct: 4218 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 118 ----------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
GV + ++ +H++ L +G V+ G NS QLGL +H+ PT +
Sbjct: 4278 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLV- 4335
Query: 166 RSSLKSSQPLIGVCCGRFHSVVYSSREV 193
++ + + + GR HS +++ V
Sbjct: 4336 --TVLQGKNIRQISAGRCHSAAWTAPPV 4361
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3996 DVYLWGAGRHGQLAEAGRNVM-VPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4052
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4053 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4112
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4113 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4166
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4167 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4216
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4217 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I L +++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLI--EELAATR-IVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 55/208 (26%)
Query: 37 NANY-NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGHGQGGRL 94
N +Y LG G+ + +PE + +L+ I QV H++ VS DG VW+ G G G+L
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4217
Query: 95 GLGSESSVVSPKKLN-------------------FEKD-------KDKL----------- 117
GLG+ ++ SP+K++ KD +D+L
Sbjct: 4218 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 118 ----------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
GV + ++ +H++ L +G V+ G NS QLGL +H+ PT +
Sbjct: 4278 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLV- 4335
Query: 166 RSSLKSSQPLIGVCCGRFHSVVYSSREV 193
++ + + + GR HS +++ V
Sbjct: 4336 --TVLQGKNIRQISAGRCHSAAWTAPPV 4361
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3996 DVYLWGAGRHGQLAEAGRNVM-VPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4052
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4053 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4112
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4113 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4166
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4167 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4101 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGK 4217
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4218 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV-WSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG V W+ G
Sbjct: 4153 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGD 4212
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4213 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4272
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4273 GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4331
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4332 EPTLVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4362
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3997 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4053
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4054 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4113
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4114 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4167
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4168 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4219
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4216
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4217 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I L +++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLI--EELAATR-IVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 55/208 (26%)
Query: 37 NANY-NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGHGQGGRL 94
N +Y LG G+ + +PE + +L+ I QV H++ VS DG VW+ G G G+L
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4217
Query: 95 GLGSESSVVSPKKLN-------------------FEKD-------KDKL----------- 117
GLG+ ++ SP+K++ KD +D+L
Sbjct: 4218 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 118 ----------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
GV + ++ +H++ L +G V+ G NS QLGL +H+ PT +
Sbjct: 4278 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLV- 4335
Query: 166 RSSLKSSQPLIGVCCGRFHSVVYSSREV 193
++ + + + GR HS +++ V
Sbjct: 4336 --TVLQGKNIRQISAGRCHSAAWTAPPV 4361
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3996 DVYLWGAGRHGQLAEAGRNVM-VPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4052
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4053 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4112
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4113 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4166
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4167 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 114/245 (46%), Gaps = 29/245 (11%)
Query: 30 EVYIWGTN--ANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+V WG N L TG + + P L SL + QV HS+ ++ DGR+++ G
Sbjct: 108 QVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWG 167
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKL----GVAMASISQD--HSVFLMLSGSVFVC 141
G+LG+G +P + + +L GV + ++ HS L +SG+VF
Sbjct: 168 DNSFGQLGIG------APGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGW 221
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHA- 200
G N+ QLGL VSPTP+ +LK+ Q C + +++ +S ++ FG +
Sbjct: 222 GKNNCGQLGLGTTEDR-VSPTPL--KNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSE 278
Query: 201 GQLGHSPVTVSSASVIEPK-VQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
GQLGH S ++ + P+ VQ + E I + G +H+ E G F G
Sbjct: 279 GQLGHG----SHSNEVNPRSVQGFLGSE-----ITQVACGRQHTLVLEGRTGRFFSLG-Q 328
Query: 260 GKKGK 264
G KG+
Sbjct: 329 GSKGQ 333
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 9/147 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG G+ + R P L +LK +K + + ++ ++ G ++ G G
Sbjct: 218 VFGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGS 277
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML---SGSVFVCGLNSFH 147
G+LG GS S+ V+P+ + + LG + ++ L+L +G F G S
Sbjct: 278 EGQLGHGSHSNEVNPRSV-----QGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKG 332
Query: 148 QLGLSPPPSH-IVSPTPIPRSSLKSSQ 173
QLGL S SP P P + S++
Sbjct: 333 QLGLDNDSSKSCASPVPGPWEAPSSTE 359
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 84/230 (36%), Gaps = 58/230 (25%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPEL-----LDSLKRASIKQVCMDKFHSVFVSDDGRVWS 85
V+ WG + LG S DVP L + +L I+++ H+ + DG V
Sbjct: 3 VFSWGCTQDGQLGI-SGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMM 61
Query: 86 CGHGQGGRLGL-----------GSESSVVS------------------------------ 104
CG G+LG +E+ V++
Sbjct: 62 CGANDRGQLGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCG 121
Query: 105 --------PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPS 156
+K F K VA + HS+ L G +F G NSF QLG+ P
Sbjct: 122 LSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGR 181
Query: 157 HIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
+ P SSL P+ + CG +HS S S V+ +G + GQLG
Sbjct: 182 TLYRDHPQQLSSLPGV-PIRRLACGGWHSFALSVSGAVFGWGKNNCGQLG 230
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4065 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4124
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4125 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4181
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4182 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4227
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 55/208 (26%)
Query: 37 NANY-NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGHGQGGRL 94
N +Y LG G+ + +PE + +L+ I QV H++ VS DG VW+ G G G+L
Sbjct: 4123 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4182
Query: 95 GLGSESSVVSPKKLN-------------------FEKD-------KDKL----------- 117
GLG+ ++ SP+K++ KD +D+L
Sbjct: 4183 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4242
Query: 118 ----------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
G+ + ++ +H++ L +G V+ G NS QLGL +H+ PT +
Sbjct: 4243 NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLVT 4301
Query: 166 RSSLKSSQPLIGVCCGRFHSVVYSSREV 193
K+ + + GR HS +++ V
Sbjct: 4302 GLQGKNVRQ---ISAGRCHSAAWTAPPV 4326
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3961 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4017
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4018 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4077
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4078 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4131
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4132 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4183
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4218
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4219 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4154 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4213
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4214 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4273
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4274 GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4332
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4333 EPTLVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4363
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4055 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4114
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4115 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4168
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4169 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
cuniculus]
Length = 4860
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4101 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4217
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4218 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4153 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4212
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4213 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4272
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4273 GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVR 4331
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + ++ + + + GR HS +++ V
Sbjct: 4332 EPTLV---TVLQGKNIRQISAGRCHSAAWTAPPV 4362
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3997 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4053
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4054 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4113
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4114 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4167
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4168 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4219
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4107 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNG 4166
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4167 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGK 4223
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4224 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4269
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P + L +++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLV--EELAATR-IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 55/208 (26%)
Query: 37 NANY-NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGHGQGGRL 94
N +Y LG G+ + +PE + +L+ I QV H++ VS DG VW+ G G G+L
Sbjct: 4165 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKL 4224
Query: 95 GLGSESSVVSPKKLN-------------------FEKD-------KDKL----------- 117
GLG+ ++ SP+K++ KD +D+L
Sbjct: 4225 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4284
Query: 118 ----------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
GV + ++ +H++ + +G V+ G NS QLGL +H+ PT I
Sbjct: 4285 NRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLG-HTNHVREPTLI- 4342
Query: 166 RSSLKSSQPLIGVCCGRFHSVVYSSREV 193
++ + + + GR HS +++ V
Sbjct: 4343 --TVLQGKNIRQISAGRCHSAAWTAPPV 4368
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 14/173 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV---CMDKFHSVFVSDDGRVWSCG 87
V G + LG G+ V ++ +L+ + Q+ C HS+ +++ G V+S G
Sbjct: 4053 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4112
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G G+LG G+ P+++ + ++ V S HS + G +F G +
Sbjct: 4113 DGDYGKLGHGNSDRQRRPRQIEALQGEE---VVQMSCGFKHSAVVTADGKMFTFGNGDYG 4169
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIG-VCCGRFHSVVYSS--REVYTFG 197
+LGL + + P ++L+ Q IG V CG H++ S+ V+ FG
Sbjct: 4170 RLGLGNTSNKKL---PERVTALEGYQ--IGQVACGLNHTLAVSTDGSMVWAFG 4217
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + +P S +A +QV + + + +G V +CG G
Sbjct: 4003 DVYLWGAGRHGQLAEAGRNVM-IPAGAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4059
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4060 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4119
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV + +++TFG G G +
Sbjct: 4120 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTADGKMFTFG--NGDYGRLGL 4173
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSFTAET--SLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ T S+ FG G GK G
Sbjct: 4174 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLG 4225
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ ++K+ V +A Q S+ ++ +G VFV G N Q
Sbjct: 179 NNSGQVGSGSTANQPIPRRVT-GCLQNKVIVTIAC-GQMCSMAVVDTGEVFVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGSSGNQ---PTPCRIAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PV V VIE
Sbjct: 293 NKSNQSYPTPVVVEKDRVIE 312
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 65 DEIFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKI--ACLSYGSGPHVVLATTEGEVFT 122
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 179
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR + ++ ++ + CG+ S+ V + EV+ +G +
Sbjct: 180 NSGQVG-----SGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGN 234
Query: 201 GQLG 204
GQLG
Sbjct: 235 GQLG 238
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P+KL+ K
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKIAC 102
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 103 LSYG--SGPHVVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 157
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTI 210
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 145 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 204
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + +P+++ ++K+ V +A Q + ++ SG V+V G N Q
Sbjct: 205 NNSGQVGSGSTVNQPTPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDSGEVYVWGYNGNGQ 262
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 263 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 318
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 319 NKSNQSYPTPVTVEKDRIIE 338
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 91 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHIVLATTEGEVFT 148
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 149 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 205
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + PTP + ++ ++ + CG+ + V S EVY +G + GQ
Sbjct: 206 NSGQVG---SGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQ 262
Query: 203 LG 204
LG
Sbjct: 263 LG 264
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML 134
++ + + ++ G G LGLG S + P++L+ K ++ S H V
Sbjct: 85 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHIVLATT 142
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EV 193
G VF G N++ QLG + +H + P I S+ S++ +I V CG +HS+V +S EV
Sbjct: 143 EGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEVACGSYHSLVLTSDGEV 199
Query: 194 YTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
+ +G ++GQ+G + P ++ KV TI
Sbjct: 200 FAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTI 236
>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
Length = 400
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 103/226 (45%), Gaps = 16/226 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS---IKQVCMDKFHSVFVSDDGRVWSC 86
E++ WG + LGT + +P+LLD + +S I + H + ++ DG+V +
Sbjct: 13 EIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTW 72
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G G+LG G S + PK + K + + S HS F+ +G +F CG SF
Sbjct: 73 GRGTSGQLGHGDMVSSLQPKHV---KLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSF 129
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLG 204
QLG SH SP + S S+ + + CG HS V+ +VY FG GQLG
Sbjct: 130 GQLGHGDCKSH-CSPVKV---SYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGKRGQLG 185
Query: 205 HSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSL 250
S S SV QAT+ E + ++N + +A L
Sbjct: 186 VSMDNTRSISV----PQATVGLEGVEIISIDANGDHSAALSANGHL 227
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V WG + LG G + P+ + L+ + V HS FVSD G +++CG
Sbjct: 67 GKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGD 126
Query: 89 GQGGRLGLGSESSVVSPKKLNF--EKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LG G S SP K+++ K D++ M HS+ L+ V+ G
Sbjct: 127 GSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMR-----HSLVLLKGDQVYGFGSGKR 181
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
QLG+S + +S +P++++ +I + HS S+ +YT+G
Sbjct: 182 GQLGVSMDNTRSIS---VPQATVGLEGVEIISIDANGDHSAALSANGHLYTWG 231
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 26/233 (11%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQ--TRDV--PELL 56
++ + NE++R I + + +S N E+Y WG A+ LG G Q T DV P+ +
Sbjct: 168 VSTLYNEKIRQIACGMA-HTLALSVN--GEIYSWGAGADGQLGVGKHQEETADVATPQKV 224
Query: 57 DSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
+ + + H + ++DD R++S G G GRLGLG S SP + + +
Sbjct: 225 RVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGDSESRFSPTVVR--RSIEN 282
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL--SPPPSHIVSPTPIPRSSL----- 169
L + + H+ L +G +F CG S+ QLG + P + + L
Sbjct: 283 LRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIV 342
Query: 170 -KSSQPLIGVCCGRFHSVVYSSR-EVYTFG-IHAGQLG-------HSPVTVSS 212
+ +I CG H++V S+ EV+ +G GQLG +SPV ++S
Sbjct: 343 QLRDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTGGTEGANSPVELTS 395
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLD-SLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++ WG A+ LG G ++R P ++ S++ I V H+ +SD+G +++CG G
Sbjct: 251 LFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRG 310
Query: 90 QGGRLGLGSESSVVSPKK----------LNFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
G+LG G ++ KK L+ + +DK + A+ H++ + +G VF
Sbjct: 311 SYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKK-IIKAACGDTHTLVISTAGEVF 369
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG-VCCGRFHSVV 187
G QLG + +P+ +SL+ L+G V CG HS
Sbjct: 370 AWGAAEDGQLGTGGTEG---ANSPVELTSLRG---LVGDVSCGLVHSAA 412
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 9/186 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ + EV WG LG+G+ + VP ++ +L + V +H+ V+D G
Sbjct: 83 VAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGL 142
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLN--FEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
V G G G+LG G +S + P+ ++ + + ++ MA H++ L ++G ++
Sbjct: 143 VMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMA-----HTLALSVNGEIYS 197
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH 199
G + QLG+ + + + + CG H + + ++++G+
Sbjct: 198 WGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLG 257
Query: 200 A-GQLG 204
A G+LG
Sbjct: 258 ADGRLG 263
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H+V V++DG V S G G G+LG G+ P + + GVA H+ +
Sbjct: 81 HTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYY---HTAVV 137
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS-SLKSSQPLIGVCCGRFHSVVYS-S 190
G V G + QLG S + +PR+ S ++ + + CG H++ S +
Sbjct: 138 TDVGLVMCWGKGNSGQLGQGDWTSSL-----LPRTVSTLYNEKIRQIACGMAHTLALSVN 192
Query: 191 REVYTFGIHA-GQLGHSPVTVSSASVIEPK 219
E+Y++G A GQLG +A V P+
Sbjct: 193 GEIYSWGAGADGQLGVGKHQEETADVATPQ 222
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 22/157 (14%)
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEK------------DKDKLGVAMASISQDHSVFLML 134
G G+ GRLG G S + PK+L F+K + G + H+V +
Sbjct: 28 GWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVTE 87
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-V 193
G V G + QLG V P +L S+ + GV CG +H+ V + V
Sbjct: 88 DGEVVSWGWGNEGQLGSGNAFDQTV---PAVVKAL-SNHRVCGVACGYYHTAVVTDVGLV 143
Query: 194 YTFGI-HAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
+G ++GQLG T S + P+ +T+ E +
Sbjct: 144 MCWGKGNSGQLGQGDWT----SSLLPRTVSTLYNEKI 176
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4097 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4156
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4157 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4213
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4214 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4259
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4149 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4208
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4209 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4268
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4269 GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVR 4327
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + ++ + + + GR HS +++ V
Sbjct: 4328 EPTLV---TVLQGKNVRQISAGRCHSAAWTAPPV 4358
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3993 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4049
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4050 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4109
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4110 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4163
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4164 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4215
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4216
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4217 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 55/208 (26%)
Query: 37 NANY-NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGHGQGGRL 94
N +Y LG G+ + +PE + +L+ I QV H++ VS DG VW+ G G G+L
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4217
Query: 95 GLGSESSVVSPKKLN-------------------FEKD-------KDKL----------- 117
GLG+ ++ SP+K++ KD +D+L
Sbjct: 4218 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 118 ----------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
GV + ++ +H++ L +G V+ G NS QLGL +H+ PT +
Sbjct: 4278 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLV- 4335
Query: 166 RSSLKSSQPLIGVCCGRFHSVVYSSREV 193
++ + + + GR HS +++ V
Sbjct: 4336 --TVLQGKNIRQISAGRCHSAAWTAPPV 4361
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3996 DVYLWGAGRHGQLAEAGRNVM-VPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4052
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4053 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4112
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4113 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4166
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4167 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4095 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4154
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + + GS V+ G + +
Sbjct: 4155 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGK 4211
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4212 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4257
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4147 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGD 4206
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4207 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4266
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4267 GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4325
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4326 EPTLVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4356
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3991 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4047
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4048 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4107
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4108 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4161
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ + + S+ FG G GK G
Sbjct: 4162 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4213
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Anolis carolinensis]
Length = 4963
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 375 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 432
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 433 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 492
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 493 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 546
Query: 205 H 205
H
Sbjct: 547 H 547
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 533 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 590
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 591 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 645
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I L +++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 646 LGCGSSEATALRPKLI--EELAATR-IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 702
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 703 N---STGPITKPK 712
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4193 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4252
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4253 DYGRLGLGNTSNKKLPERV---AALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGK 4309
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + + CG +F + VYTFG
Sbjct: 4310 LGLG-------------NSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 4355
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 7/171 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V S + V+ +G LG G+ + P+ +D L IK+V SV ++ DG
Sbjct: 4291 VVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGH 4350
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
V++ G + L G + P+++ + V ++ +H++ L SG V+ G
Sbjct: 4351 VYTFGQDRLIGLPEGRARNHNRPQQV---PALSGVFVEDIAVGAEHTLALSASGDVYAWG 4407
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
NS QLGL +H+ PT + KS + + GR HS +SS V
Sbjct: 4408 SNSEGQLGLG-HTNHVREPTLVTSLQGKSVRQ---ISAGRCHSAAWSSPPV 4454
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV---CMDKFHSVFVSDDGRVWSCG 87
V G + LG G+ V ++ +L+ + Q+ C HS+ +++ G V+S G
Sbjct: 4139 VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWG 4198
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G G+LG G+ P+++ + ++ V S HS + G +F G +
Sbjct: 4199 DGDYGKLGHGNSDRQRRPRQIEALQGEE---VVQMSCGFKHSAVVTADGKLFTFGNGDYG 4255
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIG-VCCGRFHSVVYSS--REVYTFG 197
+LGL + + P ++L+ Q IG V CG H++V S+ V+ FG
Sbjct: 4256 RLGLGNTSNKKL---PERVAALEGYQ--IGEVACGLNHTLVVSTDGSMVWAFG 4303
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V++WG + L + P S +QV + + + +G V +CG G
Sbjct: 4089 DVFLWGAGRHGQLAEAGRNAVSPPP---SPSFCQAQQVICGQNCTFVIQANGTVLACGEG 4145
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4146 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4205
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV + +++TFG G G +
Sbjct: 4206 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTADGKLFTFG--NGDYGRLGL 4259
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSFTAET--SLGPEFGGGWTGKKG 263
+S + +V A L G+ I E G H+ T S+ FG G GK G
Sbjct: 4260 GNTSNKKLPERVAA------LEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLG 4311
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4069 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4128
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4129 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4185
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4186 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4231
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 55/208 (26%)
Query: 37 NANY-NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGHGQGGRL 94
N +Y LG G+ + +PE + +L+ I QV H++ VS DG VW+ G G G+L
Sbjct: 4127 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4186
Query: 95 GLGSESSVVSPKKLN-------------------FEKD-------KDKL----------- 117
GLG+ ++ SP+K++ KD +D+L
Sbjct: 4187 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4246
Query: 118 ----------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
GV + ++ +H++ L +G V+ G NS QLGL +H+ PT +
Sbjct: 4247 NRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVREPTLV- 4304
Query: 166 RSSLKSSQPLIGVCCGRFHSVVYSSREV 193
++ + + + GR HS +++ V
Sbjct: 4305 --TVLQGKNIRQISAGRCHSAAWTAPPV 4330
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3965 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4021
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4022 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4081
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4082 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4135
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4136 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4187
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Nomascus leucogenys]
Length = 4855
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4148 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4207
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4208 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4267
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4268 GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4326
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4327 EPTLVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4357
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P + + Q+ HS V+ DG++++ G+G
Sbjct: 4101 EVFSWGDGDYGKLGHGNSDRQRRPX-----QGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4155
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4156 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4213 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4258
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 101/238 (42%), Gaps = 24/238 (10%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3997 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4053
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4054 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4113
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G H S + + ++ + CG HS VV S +++TFG G G +
Sbjct: 4114 G------HGNSDR---QRRPXQGEEVVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4162
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4163 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4214
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Felis catus]
Length = 4861
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4218
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4219 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4154 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4213
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4214 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4273
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4274 GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVR 4332
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + ++ + + + GR HS +++ V
Sbjct: 4333 EPTLV---TVLQGKNVRQISAGRCHSAAWTAPPV 4363
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4055 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4114
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4115 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4168
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4169 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|385302383|gb|EIF46516.1| putative ankyrin repeat protein [Dekkera bruxellensis AWRI1499]
Length = 750
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 57 DSLKRASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLG-----LGSESSVVSPKKLN 109
DS+ I+ + FH V ++ + G ++ G GRLG L S + V L
Sbjct: 251 DSISLPRIRFTAISSFHRVILTCEPCGNIFVAGQSSNGRLGCPGSSLTSGNCYVPIPALF 310
Query: 110 FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG--LSPPPSHIVSPTPIPR- 166
E+ + +S +HSV L S ++F G N++ QLG L S P P+
Sbjct: 311 KEQ------IIAVDVSDNHSVCLTSSNNIFTWGANTYGQLGYLLDNVRSQTDGIQPTPKL 364
Query: 167 ----SSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
K LIGV C RFH++ Y+SRE+Y +G + GQLG V+
Sbjct: 365 VCNGDIRKLHSKLIGVACSRFHTIAYTSRELYVWGANIGQLGFPTVS 411
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Equus caballus]
Length = 4860
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4101 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGK 4217
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4218 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P + ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLVEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4153 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGD 4212
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4213 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4272
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4273 GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4331
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + ++ + + + GR HS +++ V
Sbjct: 4332 EPTLV---TVLQGKNIRQISAGRCHSAAWTAPPV 4362
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3997 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4053
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4054 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4113
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4114 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4167
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSFTAET--SLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ T S+ FG G GK G
Sbjct: 4168 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLG 4219
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPK---LVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 92/200 (46%), Gaps = 23/200 (11%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-----HSVFVSDDGRVW 84
E+Y WG+N LG Q +D+P L+ +I + + HS +S V+
Sbjct: 159 ELYSWGSNIYGQLGV--QSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVF 216
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
G G+LGL E + P +L K LGV + ++SVFL G VF CG
Sbjct: 217 GWGKNTCGQLGLNDEQNRAYPSQL---KSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAG 273
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGIHA- 200
++ QLG + + IPR ++ + V CG H+ +V S VY+FG+ A
Sbjct: 274 NYGQLGHGASNNEM-----IPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGAS 328
Query: 201 GQLGHSPVTVSSASVIEPKV 220
GQLG T ++ S PKV
Sbjct: 329 GQLG----TRNTISQTLPKV 344
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 23/180 (12%)
Query: 83 VWSCGHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
++ G G+LGLG ++ P ++ F+ D V + H++FL +G V+
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSP---VQQIACGHRHTLFLTANGQVYA 59
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH 199
CG N HQLG P P PIP + +I + CG HS+ + ++ ++G +
Sbjct: 60 CGNNDHHQLGHELPTKR---PLPIPE---LQAYVVIQIACGSRHSMALTEWGQILSWGDN 113
Query: 200 -AGQLGHSPVTVSSASVIE-PKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
GQ+GHS + VIE PK I+R + + + G HS A TS G + G
Sbjct: 114 DCGQVGHS----TDNDVIELPK----ILRFLVSRTVVQIACGNNHSL-ALTSCGELYSWG 164
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY G N ++ LG R +P + L+ + Q+ HS+ +++ G++ S G
Sbjct: 56 QVYACGNNDHHQLGHELPTKRPLP--IPELQAYVVIQIACGSRHSMALTEWGQILSWGDN 113
Query: 90 QGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G +++ V+ PK L F + + +A + +HS+ L G ++ G N + Q
Sbjct: 114 DCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGN---NHSLALTSCGELYSWGSNIYGQ 170
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLG 204
LG+ P S P+ +++ PL + CG HS + S S V+ +G + GQLG
Sbjct: 171 LGVQSPKDLPHSNAPLRLTTILGI-PLATIACGGNHSFLISKSSAVFGWGKNTCGQLG 227
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+Y WG ++ LG G + + P ++ + ++Q+ H++F++ +G+V++CG+
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+LG + + + L + + + + +A S+ HS+ L G + G N Q
Sbjct: 63 NDHHQLG----HELPTKRPLPIPELQAYVVIQIACGSR-HSMALTEWGQILSWGDNDCGQ 117
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLG 204
+G S I P + S+ ++ + CG HS+ +S E+Y++G + GQLG
Sbjct: 118 VGHSTDNDVIELPKIL---RFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 172
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Pan troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + + GS V+ G + +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGK 4218
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4219 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4154 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGD 4213
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4214 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4273
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4274 GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4332
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4333 EPTLVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4363
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4055 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4114
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4115 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4168
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ + + S+ FG G GK G
Sbjct: 4169 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4220
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4218
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4219 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4154 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4213
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4214 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4273
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
G+ + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4274 GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4332
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4333 EPTLVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4363
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4055 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4114
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4115 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4168
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4169 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4218
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4219 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4154 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4213
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4214 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4273
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4274 GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVR 4332
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + ++ + + + GR HS +++ V
Sbjct: 4333 EPTLV---TVLQGKNVRQISAGRCHSAAWTAPPV 4363
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4055 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4114
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4115 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4168
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4169 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4101 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4217
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4218 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4153 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4212
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4213 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4272
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4273 GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4331
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4332 EPTLVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4362
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3997 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4053
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4054 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4113
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4114 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4167
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4168 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4219
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + +P+++ ++K+ V +A Q + ++ SG V+V G N Q
Sbjct: 184 NNSGQVGSGSTVNQPTPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDSGEVYVWGYNGNGQ 241
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 242 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 297
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 298 NKSNQSYPTPVTVEKDRIIE 317
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 70 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHIVLATTEGEVFT 127
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 184
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + PTP + ++ ++ + CG+ + V S EVY +G + GQ
Sbjct: 185 NSGQVG---SGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQ 241
Query: 203 LG 204
LG
Sbjct: 242 LG 243
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML 134
++ + + ++ G G LGLG S + P++L+ K ++ S H V
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHIVLATT 121
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EV 193
G VF G N++ QLG + +H + P I S+ S++ +I V CG +HS+V +S EV
Sbjct: 122 EGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEVACGSYHSLVLTSDGEV 178
Query: 194 YTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
+ +G ++GQ+G + P ++ KV TI
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTI 215
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4100 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4216
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4217 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4152 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4211
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4212 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4271
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4272 GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVR 4330
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + ++ + + + GR HS +++ V
Sbjct: 4331 EPTLV---TVLQGKNVRQISAGRCHSAAWTAPPV 4361
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3996 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4052
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4053 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4112
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4113 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4166
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4167 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4111 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4170
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4171 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4227
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4228 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4273
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4163 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4222
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4223 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4282
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4283 GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVR 4341
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + ++ + + + GR HS +++ V
Sbjct: 4342 EPTLV---TVLQGKNVRQISAGRCHSAAWTAPPV 4372
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 4007 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4063
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4064 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4123
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4124 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4177
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4178 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4229
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 743
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 15/196 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG+N LG G+ R VP + L + + V FHS+ V DG VW+ G
Sbjct: 515 VWTWGSNLYGQLGDGTTSNRLVPVQVQGL--SGVAAVAAGSFHSLAVHSDGSVWAWGSNS 572
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G LG G+ S+ + P ++ GVA+A+ HS+ + G+V+ G NSF +LG
Sbjct: 573 SGELGDGTTSNRLVPGRVPGLSG----GVAVAA-GGFHSLVVRSDGTVWTWGSNSFGELG 627
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHSPV 208
S V P+ L ++ V G HS+ V S V+T+G ++ GQLG
Sbjct: 628 DGTTTSRSV---PVQVQGLSG---VVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTT 681
Query: 209 TVSSASVIEPKVQATI 224
T S V P + +
Sbjct: 682 TRRSVPVQVPGLSGVV 697
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 17/182 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG+NA LG G+ R VP + S + V HS+ V DG VW+ G
Sbjct: 466 SVWAWGSNAYGQLGEGTTTNRLVPVQVLS----GVVAVAAGSNHSLAVRSDGTVWTWGSN 521
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G+ S+ + P ++ + GVA + HS+ + GSV+ G NS +L
Sbjct: 522 LYGQLGDGTTSNRLVPVQV-----QGLSGVAAVAAGSFHSLAVHSDGSVWAWGSNSSGEL 576
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHA-GQLGHSP 207
G + +V P +P S + V G FHS VV S V+T+G ++ G+LG
Sbjct: 577 GDGTTSNRLV-PGRVPGLSGG-----VAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGT 630
Query: 208 VT 209
T
Sbjct: 631 TT 632
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG+N + G G+ R P + L V HS+ DG VW+ G
Sbjct: 367 VWAWGSNFSGERGEGTTNNRASPVQVQGLGGG--VAVAAGFNHSLAARSDGSVWAWGSND 424
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ + SP ++ + GV + DHS+ L GSV+ G N++ QLG
Sbjct: 425 SGQLGDGTTRNSTSPVQV-----QGLSGVVAVAAGFDHSLALRSDGSVWAWGSNAYGQLG 479
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
+ +V P L ++ V G HS+ V S V+T+G + GQLG
Sbjct: 480 EGTTTNRLV-----PVQVLSG---VVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLG 527
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 15/176 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG+N++ LG G+ R P + L + + V +S+ V DG VW+ G
Sbjct: 117 VWAWGSNSDGQLGDGTTTMRLTPVRVQGL--SGVVSVAAGSSYSLAVRSDGTVWAWGSNF 174
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ S+ + P ++ GV + HS+ ++ GSV+ G NS QLG
Sbjct: 175 SGQLGDGTTSNRLVPVQV-----PGLSGVVSVAAGSSHSLAVLSDGSVWAWGANSSGQLG 229
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
+ +V P +P S + G HS+ V S V+T+G ++ GQLG
Sbjct: 230 DGTKINRLV-PVQVPGLSGVVAV-----AAGAAHSLAVRSDGTVWTWGANSFGQLG 279
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG N++ LG G++ R VP + L HS+ V DG VW+ G
Sbjct: 216 SVWAWGANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAG--AAHSLAVRSDGTVWTWGAN 273
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G++S + P ++ + GV + + HS+ L GSV+ G NS QL
Sbjct: 274 SFGQLGDGTKSDRLVPVRV-----QGLSGVVASDVGSYHSLALRSDGSVWAWGHNSSGQL 328
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG 197
G S V P+ L + V G HS+ V S V+ +G
Sbjct: 329 GDDSSTSRSV---PVQVRGLSGG---MAVTAGSSHSLAVGSDGTVWAWG 371
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG+N+ LG G+ +R VP + L + + V HS+ V DG VW+ G+
Sbjct: 615 VWTWGSNSFGELGDGTTTSRSVPVQVQGL--SGVVAVDAGNSHSLAVRSDGTVWTWGYNS 672
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ + P ++ GV + H + + G+V+ G NSF QLG
Sbjct: 673 YGQLGDGTTTRRSVPVQV-----PGLSGVVAMATGALHPLVVRSDGTVWAWGYNSFGQLG 727
Query: 151 LSPP 154
P
Sbjct: 728 NGSP 731
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG+N + LG G+ R VP + L + + V HS+ V DG VW+ G
Sbjct: 167 VWAWGSNFSGQLGDGTTSNRLVPVQVPGL--SGVVSVAAGSSHSLAVLSDGSVWAWGANS 224
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G++ + + P ++ + HS+ + G+V+ G NSF QLG
Sbjct: 225 SGQLGDGTKINRLVPVQVPGLSGV-----VAVAAGAAHSLAVRSDGTVWTWGANSFGQLG 279
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCC---GRFHSVVY-SSREVYTFGIH-AGQLG 204
+V P + Q L GV G +HS+ S V+ +G + +GQLG
Sbjct: 280 DGTKSDRLV-PVRV--------QGLSGVVASDVGSYHSLALRSDGSVWAWGHNSSGQLG 329
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Query: 33 IWGTNAN--YNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+W T +N LG G+ P + L + + V HS+ V DG VW+ G
Sbjct: 67 VWATGSNDLGQLGDGTTTNHSAPVQVPGL--SGVVAVAAGSSHSLAVRHDGTVWAWGSNS 124
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ + ++P ++ + GV + +S+ + G+V+ G N QLG
Sbjct: 125 DGQLGDGTTTMRLTPVRV-----QGLSGVVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLG 179
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLG 204
+ +V P +P S ++ V G HS+ V S V+ +G + +GQLG
Sbjct: 180 DGTTSNRLV-PVQVPGLS-----GVVSVAAGSSHSLAVLSDGSVWAWGANSSGQLG 229
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 15/176 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N+ LG G++ R VP + L V +HS+ + DG VW+ GH
Sbjct: 267 VWTWGANSFGQLGDGTKSDRLVPVRVQGLSGVVASDVG--SYHSLALRSDGSVWAWGHNS 324
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S +S P ++ + G + HS+ + G+V+ G N + G
Sbjct: 325 SGQLGDDSSTSRSVPVQV-----RGLSGGMAVTAGSSHSLAVGSDGTVWAWGSNFSGERG 379
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY-SSREVYTFGIH-AGQLG 204
+ +P+ L + V G HS+ S V+ +G + +GQLG
Sbjct: 380 EGTTNNR---ASPVQVQGLGGG---VAVAAGFNHSLAARSDGSVWAWGSNDSGQLG 429
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 47 QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPK 106
Q +R P L D+ RA ++ +S+ + DG VW+ G G+LG G+ ++ +P
Sbjct: 35 QTSRGAP-LRDAPSRA---RLAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAPV 90
Query: 107 KLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR 166
++ GV + HS+ + G+V+ G NS QLG + TP+
Sbjct: 91 QV-----PGLSGVVAVAAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRL---TPVRV 142
Query: 167 SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLG 204
L ++ V G +S+ V S V+ +G + +GQLG
Sbjct: 143 QGLSG---VVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLG 179
>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
Length = 892
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 14/180 (7%)
Query: 48 QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE-SSVVSPK 106
Q +P +L++ R + QV H+V ++ +G+V++ G G+LGLG + S+ SP+
Sbjct: 103 QALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQ 162
Query: 107 KLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR 166
+ + + + S DHS L +SGSVF G N QLGL +PT +
Sbjct: 163 CV---RSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDR-CTPTSVDS 218
Query: 167 SSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHSPVTVSSASVIEPKVQATI 224
+LK + + CG+ H+ + + V+TFG GQLGH+ SS + + P++ A +
Sbjct: 219 LNLKKT---TSISCGKDHTAILTKHGTVFTFGSGQFGQLGHN----SSRNELRPRLVAEL 271
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCM 69
P+ + + V+ + +VY WG N+ LG G + P+ + SL + QV
Sbjct: 118 PVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSA 177
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHS 129
HS +S G V+ G G+LGLG +P ++ K + S +DH+
Sbjct: 178 GGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSI---SCGKDHT 234
Query: 130 VFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY- 188
L G+VF G F QLG + + + P + L ++ + + CGR+H++V
Sbjct: 235 AILTKHGTVFTFGSGQFGQLGHNSSRNEL---RPRLVAELWGAK-VTRIACGRYHTLVLQ 290
Query: 189 SSREVYTFGIH-AGQLGHS 206
+ ++Y+FG + QLG S
Sbjct: 291 ENNKIYSFGCNDQNQLGRS 309
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG G Q R P +DSL + K H+ ++ G V++ G GQ
Sbjct: 191 VFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQ 250
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG S + + P+ + + G + I+ + H++ L + ++ G N +Q
Sbjct: 251 FGQLGHNSSRNELRPRLV-----AELWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQNQ 305
Query: 149 LGLSPPPSHIVSPTPI 164
LG S SH P P+
Sbjct: 306 LGRS-NDSHPSVPLPV 320
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4091 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4150
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4151 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4207
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4208 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4253
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4143 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4202
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4203 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4262
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4263 GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVR 4321
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + ++ + + + GR HS +++ V
Sbjct: 4322 EPTLV---TVLQGKNVRQISAGRCHSAAWTAPPV 4352
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3987 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4043
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4044 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4103
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4104 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4157
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4158 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4209
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 3743 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 3802
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 3803 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 3859
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 3860 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 3905
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 3795 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 3854
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 3855 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 3914
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 3915 GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 3973
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 3974 EPTVVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4004
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3639 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 3695
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 3696 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 3755
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 3756 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 3809
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 3810 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 3861
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4087 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4146
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4147 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4203
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4204 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4249
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4139 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4198
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4199 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4258
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
G+ + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4259 GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4317
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4318 EPTLVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4348
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3983 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4039
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4040 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4099
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4100 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4153
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4154 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4205
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4094 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4153
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4154 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4210
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4211 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4256
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4146 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4205
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4206 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4265
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
G+ + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4266 GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4324
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4325 EPTLVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4355
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3990 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4046
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4047 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4106
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4107 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4160
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4161 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4212
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4218
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4219 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4154 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4213
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4214 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4273
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
G+ + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4274 GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4332
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4333 EPTLVTGLQGKN---IRQISAGRCHSAAWTAPPV 4363
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4055 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4114
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4115 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4168
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4169 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Pongo abelii]
Length = 4864
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4105 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4164
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4165 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4221
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4222 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4267
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4157 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4216
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4217 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4276
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4277 GRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4335
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4336 EPTLVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4366
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 4001 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4057
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4058 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4117
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4118 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4171
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4172 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4223
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4095 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4154
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4155 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4211
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4212 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4257
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4147 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4206
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4207 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4266
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
G+ + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4267 GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4325
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4326 EPTLVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4356
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3991 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4047
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4048 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4107
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4108 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4161
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4162 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4213
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
gallus]
Length = 4860
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4101 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4160
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H+V + GS V+ G + +
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGK 4217
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + + CG +F + VYTFG
Sbjct: 4218 LGLG-------------NSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 4263
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 55/208 (26%)
Query: 37 NANY-NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGHGQGGRL 94
N +Y LG G+ + +PE + +L+ I QV H+V VS DG VW+ G G G+L
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKL 4218
Query: 95 GLGSESSVVSPKKLN-------------------FEKD-------KDKL----------- 117
GLG+ ++ SP+K++ KD +D+L
Sbjct: 4219 GLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278
Query: 118 ----------GVAMASIS--QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
GV + I+ +H++ L +G V+ G NS QLGL +H+ PT I
Sbjct: 4279 NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG-HTNHVREPTLI- 4336
Query: 166 RSSLKSSQPLIGVCCGRFHSVVYSSREV 193
++ + + + GR HS +++ V
Sbjct: 4337 --TVLQGKNIRQISAGRCHSAAWTAPPV 4362
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 42 LGTGSQQTRDVPELLDSLKRASIKQV---CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGS 98
LG G+ V ++ +L+ + Q+ C HS+ +++ G V+S G G G+LG G+
Sbjct: 4058 LGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN 4117
Query: 99 ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHI 158
P+++ + ++ V S HS + G +F G + +LGL +
Sbjct: 4118 SDRQRRPRQIEALQGEE---VVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKK 4174
Query: 159 VSPTPIPRSSLKSSQPLIG-VCCGRFHSVVYSS--REVYTFG 197
+ P ++L+ Q IG V CG H+V S+ V+ FG
Sbjct: 4175 L---PERVTALEGYQ--IGQVACGLNHTVAVSTDGSMVWAFG 4211
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3997 DVYLWGAGRHGQLAEAGRNVM-VPVAAPSFSQA--QQVVCGQNCTFVIQANGTVLACGEG 4053
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4054 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4113
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV + +++TFG G G +
Sbjct: 4114 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTADGKLFTFG--NGDYGRLGL 4167
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSFTAET--SLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ T S+ FG G GK G
Sbjct: 4168 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLG 4219
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 371 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 428
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 429 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 488
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 489 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 542
Query: 205 H 205
H
Sbjct: 543 H 543
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 529 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 586
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 587 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 641
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 642 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 698
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 699 N---STGPITKPK 708
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 29/185 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4104 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4163
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG+ S+ P+++ + G + + FL ++ CGLN H L
Sbjct: 4164 DYGRLGLGNTSNKKLPERVTALE-----GYQIGQARNNTLFFLQVA-----CGLN--HTL 4211
Query: 150 GLSPPPSHIVS-------PTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSRE 192
+S S + + + S+ KSS + V CG +F +
Sbjct: 4212 AVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH 4271
Query: 193 VYTFG 197
VYTFG
Sbjct: 4272 VYTFG 4276
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 64/224 (28%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQ----------VCMDKFHSVFVSD 79
+++ +G LG G+ + +PE + +L+ I Q V H++ VS
Sbjct: 4156 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSA 4215
Query: 80 DGR-VWSCGHGQGGRLGLGSESSVVSPKKLN-------------------FEKD------ 113
DG VW+ G G G+LGLG+ ++ SP+K++ KD
Sbjct: 4216 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 4275
Query: 114 -KDKL---------------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+D+L GV + ++ +H++ L +G V+ G NS QL
Sbjct: 4276 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4335
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
GL +H+ PT + ++ + + + GR HS +++ V
Sbjct: 4336 GLG-HTNHVREPTLV---TVLQGKNVRQISAGRCHSAAWTAPPV 4375
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 8/169 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 4000 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4056
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4057 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4116
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFG 197
G P +L+ + ++ + CG HS VV S +++TFG
Sbjct: 4117 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG 4161
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 581 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 638
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 639 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 693
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 694 QCGQGNSTGPITKPKKV 710
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 42 LGTGSQQTRDVPELLDSLKRASIKQV---CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGS 98
LG G+ V ++ +L+ + Q+ C HS+ +++ G V+S G G G+LG G+
Sbjct: 4061 LGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN 4120
Query: 99 ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
P+++ + ++ V S HS + G +F G + +LGL
Sbjct: 4121 SDRQRRPRQIEALQGEE---VVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL 4170
>gi|432959904|ref|XP_004086396.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 homolog [Oryzias
latipes]
Length = 496
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ DG++WS G G+LG G + +PK + ++ + A+ ++H++ L
Sbjct: 132 HSLLMTTDGKLWSWGRNDKGQLGHGDTKRIEAPKLIEALAEQV---IVSAACGRNHTLVL 188
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSR 191
G+ + G N QLG ++SP PI + QPL+ V CG F VV
Sbjct: 189 TEDGTAYSFGENKLGQLGQGNQTDAVLSPAPISY----NGQPLVKVSCGAEFSMVVDCKG 244
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 245 NLYSFGCPEYGQLGHN 260
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P+L+++L I + H++ +++DG +S G
Sbjct: 141 KLWSWGRNDKGQLGHGDTKRIEAPKLIEALAEQVIVSAACGRNHTLVLTEDGTAYSFGEN 200
Query: 90 QGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LG G+++ +V+SP +++ + S + S+ + G+++ G + Q
Sbjct: 201 KLGQLGQGNQTDAVLSPAPISYNGQP----LVKVSCGAEFSMVVDCKGNLYSFGCPEYGQ 256
Query: 149 LGLSPPPSHIVSPTP-------IPRSSL----KSSQPLI---------GVCCGRFHSVVY 188
LG + I IPR KS I V CG H++V
Sbjct: 257 LGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKSKDGQIMPVPNVVVRDVACGGNHTLVL 316
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 317 DSQKRVFSWGFGGYGRLGHT 336
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4111 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4170
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4171 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4227
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4228 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4273
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 55/208 (26%)
Query: 37 NANY-NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGHGQGGRL 94
N +Y LG G+ + +PE + +L+ I QV H++ VS DG VW+ G G G+L
Sbjct: 4169 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4228
Query: 95 GLGSESSVVSPKKLN-------------------FEKD-------KDKL----------- 117
GLG+ ++ SP+K++ KD +D+L
Sbjct: 4229 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4288
Query: 118 ----------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
GV + ++ +H++ L +G V+ G NS QLGL +H+ PT +
Sbjct: 4289 NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLV- 4346
Query: 166 RSSLKSSQPLIGVCCGRFHSVVYSSREV 193
++ + + + GR HS +++ V
Sbjct: 4347 --TVLQGKNIRQISAGRCHSAAWTAPPV 4372
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 4007 DVYLWGAGRHGQLAEAGRNVM-VPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4063
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4064 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4123
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4124 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4177
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4178 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4229
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3089
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L + A + + ++ + +S DG V +CG G
Sbjct: 383 EVYVWGSNSSHQLVEGTQEKILQPKLAATF--ADAQTIEAGQYCTFVISSDGSVRACGKG 440
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 441 SYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 500
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVC--CGRFHSVVYSSR-EVYTFGI-HAGQLG 204
G H S T P+ Q + VC G HS S E+YT+G G+LG
Sbjct: 501 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLG 554
Query: 205 H 205
H
Sbjct: 555 H 555
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 541 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 598
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 599 GDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 653
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 654 LGCGSSEATALRPKLIEE---LATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 710
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 711 N---STGPITKPK 720
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 593 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 650
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ V SI H + L V+ G NS
Sbjct: 651 --GACLGCGSSEATALRPKLI---EELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMG 705
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 706 QCGQGNSTGPITKPKKV 722
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4218
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4219 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4154 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4213
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4214 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4273
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
G+ + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4274 GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4332
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4333 EPTLVTGLQGKN---IRQISAGRCHSAAWTAPPV 4363
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4055 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4114
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4115 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4168
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4169 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N LG G+ VP ++ +L + +V +HS+ ++ DG V++ G+
Sbjct: 95 EVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGY 154
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ ++K+ V +A Q SV ++ +G V+V G N Q
Sbjct: 155 NNSGQVGSGSTANQAIPRRVT-GCLQNKVVVNIAC-GQMCSVAVVDTGEVYVWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 213 LGLGSSGNQ---PTPCRVAALQGIR-VQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 206 --------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 269 NKSNQSYPTPVVVEKDRIIE 288
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN + LG G Q+ P LDSL I C+ H + + +G V++
Sbjct: 41 DEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKI--ACLSYGSGPHIILATTEGEVFT 98
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P +++ +K + VA S HS+ L G V+ G N
Sbjct: 99 WGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSY---HSLVLTSDGEVYAWGYN 155
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + IPR + ++ ++ + CG+ SV V + EVY +G +
Sbjct: 156 NSGQVG-----SGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGN 210
Query: 201 GQLG 204
GQLG
Sbjct: 211 GQLG 214
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML 134
++ + + ++ G G LGLG S + P++L+ DK ++ S H +
Sbjct: 35 LYTTINDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKI--ACLSYGSGPHIILATT 92
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EV 193
G VF G N + QLG +V P S+ S++ +I V CG +HS+V +S EV
Sbjct: 93 EGEVFTWGHNGYTQLGNGTTNHGLV---PCQVSTNLSNKQVIEVACGSYHSLVLTSDGEV 149
Query: 194 YTFGI-HAGQLG 204
Y +G ++GQ+G
Sbjct: 150 YAWGYNNSGQVG 161
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4031 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNG 4090
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4091 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4147
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4148 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 55/208 (26%)
Query: 37 NANY-NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGHGQGGRL 94
N +Y LG G+ + +PE + +L+ I QV H++ VS DG VW+ G G G+L
Sbjct: 4089 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4148
Query: 95 GLGSESSVVSPKKLN-------------------FEKD-------KDKL----------- 117
GLG+ ++ SP+K++ KD +D+L
Sbjct: 4149 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4208
Query: 118 ----------GVAMASIS--QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
GV + I+ +H++ L +G V+ G NS QLGL +H+ PT I
Sbjct: 4209 NRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVREPTLI- 4266
Query: 166 RSSLKSSQPLIGVCCGRFHSVVYSSREV 193
++ + + + GR HS +++ V
Sbjct: 4267 --TILQGKNIRQISAGRCHSAAWTASPV 4292
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + +P S +A +QV + + + +G V +CG G
Sbjct: 3927 DVYLWGAGRHGQLAEAGRNVM-IPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 3983
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 3984 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4043
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + +I + CG HS VV S +++TFG G G +
Sbjct: 4044 GHGNSDRQ---RRPRQIEALQGEE-VIQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4097
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4098 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4149
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTR---DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
E+Y WG+N LG S + P L +L + + HS +S G V+
Sbjct: 168 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 227
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LGL E++ P +L K LGV + + SVFL G VF CG ++
Sbjct: 228 GRNNCGQLGLNDETNRSYPTQL---KTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAY 284
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGI-HAGQ 202
QLG S +PR ++ + V CG H+ +V S VY FG+ +GQ
Sbjct: 285 GQLG-----HGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQ 339
Query: 203 LGHSPVTVSSASVIEPKV 220
LG T S+ S++ P+V
Sbjct: 340 LG----TRSTKSLMLPQV 353
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 30 EVYIWGTNANYNLGTG--SQQTRDVPELL-DSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
+VY G+N LG +++ R P LL L+ I Q+C HS+ +SD G+V S
Sbjct: 60 KVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 119
Query: 87 GHGQGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G G+LG ++ +V PK + K + +A + +HS+ L G ++ G N
Sbjct: 120 GDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGN---NHSLALTSCGELYSWGSNI 176
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQL 203
+ QLG++ P P+ ++L PL + CG HS + S S V+ +G + GQL
Sbjct: 177 YGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAVFGWGRNNCGQL 235
Query: 204 G 204
G
Sbjct: 236 G 236
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 30/187 (16%)
Query: 82 RVWSCGHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
++ G G+LGLG + +++P ++ + D V + H++FL +G V+
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDT---AVQQVACGHRHTLFLTATGKVY 62
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQP------LIGVCCGRFHSVVYSSR-E 192
CG N + QLG H + PT PR S P +I +CCG HS+ S +
Sbjct: 63 ACGSNDYSQLG------HDL-PTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQ 115
Query: 193 VYTFGIH-AGQLGHSPVTVSSASVIE-PKVQATIIREDLPGFIFESNRGTKHSFTAETSL 250
V ++G + GQLGH+ + +++ PKV +R+ + + + G HS A TS
Sbjct: 116 VLSWGDNDCGQLGHA----TDKEIVQLPKV----VRQLVTKTVVQIACGNNHSL-ALTSC 166
Query: 251 GPEFGGG 257
G + G
Sbjct: 167 GELYSWG 173
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 19/235 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y WG+ ++ LG G + + P + +++QV H++F++ G+V++CG
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 88 HGQGGRLG--LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
+LG L ++ +SP L + +D + + + S+ HS+ L G V G N
Sbjct: 66 SNDYSQLGHDLPTKRPRMSPFLL-IPELQDYVIIQICCGSR-HSLALSDWGQVLSWGDND 123
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQL 203
QLG + + P + + K+ ++ + CG HS+ +S E+Y++G + GQL
Sbjct: 124 CGQLGHATDKEIVQLPKVVRQLVTKT---VVQIACGNNHSLALTSCGELYSWGSNIYGQL 180
Query: 204 G-HSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
G +SP ++ + P T++ L G HSF S G FG G
Sbjct: 181 GVNSPNDLTHCNY--PLRLTTLLGIPLAAIAC----GGNHSFLISKS-GAVFGWG 228
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 31 VYIWGTNANYNLGTG--SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY WG + LG G S Q R VP +D+L I Q+ H+V ++D+G V++ G
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVP--IDALAERRIVQIACGSGHTVVLTDEGEVYTWGR 60
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G GRLG G P+ + + K+ V S H+ + +SG ++ G + +
Sbjct: 61 GDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSY---HTAAVTVSGDLYTWGGGMYGK 117
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV-YSSREVYTFG 197
LG H TP +LK Q + V CG H+VV +++VYT+G
Sbjct: 118 LGHGNETGH---STPFLVETLKGMQ-VRQVACGSRHTVVLLENKDVYTWG 163
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 11 PIDHLIRDRKIDVSSNQFN--------EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRA 62
PID L R + ++ + EVY WG + LG G + VP L++ L+
Sbjct: 27 PIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGK 86
Query: 63 SIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMA 122
+I+QV +H+ V+ G +++ G G G+LG G+E+ +P + K VA
Sbjct: 87 NIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACG 146
Query: 123 SISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGR 182
S H+V L+ + V+ G G H P P+ L+ + CG
Sbjct: 147 S---RHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPV--EELRGKNIVQISACG- 200
Query: 183 FHSVVYSS-REVYTFGI-HAGQLGHS 206
FH+ S EV+TFG G+LGH+
Sbjct: 201 FHTAALSEFGEVFTFGEGKFGRLGHN 226
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 26 NQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWS 85
++F EV+ +G LG S++ + V +++L +KQV FH+ V++ G V++
Sbjct: 207 SEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYT 266
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G G+ G+LG G + + P ++ E +KL V + H+V L +G V+ G
Sbjct: 267 WGGGEHGQLGHGDKVNKTVPTRV--ESLVEKL-VVQITCGWSHTVALTDTGEVYTWGNGD 323
Query: 146 FHQLG 150
+LG
Sbjct: 324 HGKLG 328
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG + LG G + + VP ++SL + Q+ H+V ++D G V++ G+G
Sbjct: 263 EVYTWGGGEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNG 322
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLM 133
G+LG + V PK ++ + K + VA + +H+V L+
Sbjct: 323 DHGKLGHNDTTKVTLPKLVDVLEGKRVISVASYN---EHTVALV 363
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 10/183 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+VY WG N G G + +P ++ L+ +I Q+ FH+ +S+ G V++ G
Sbjct: 158 DVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGE 217
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ GRLG SE + + + K VA H+ + +G V+ G Q
Sbjct: 218 GKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGF---HTAAVTETGEVYTWGGGEHGQ 274
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LG V+ T R + ++ + CG H+V + + EVYT+G G+LGH+
Sbjct: 275 LGHGDK----VNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHN 330
Query: 207 PVT 209
T
Sbjct: 331 DTT 333
>gi|168059919|ref|XP_001781947.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666593|gb|EDQ53243.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 415
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 16/193 (8%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS-IKQVCMDKFHSVFVSD 79
+D+ + EV+ WG + L G+ P+ +++L A+ I + H + V +
Sbjct: 1 MDIGKCRVREVWSWGAGTHGQLACGTLIDALTPQRVEALSDAALIVDIACGGAHGIAVFE 60
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
G V + G GQ G LG G E+++ P+ F + ++ A+ +HS F+ +G+++
Sbjct: 61 CGDVATWGRGQAGALGHGDETTITVPR---FISSLQGIRISHAAAGWNHSAFVTDNGALY 117
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE------- 192
CG +F QLG S +V R SS+ + V CG H++ + +
Sbjct: 118 TCGDGTFGQLGHGHTESRLVP----GRVEHLSSERINMVACGMRHTLALAVTQGSVCTSI 173
Query: 193 VYTFGIHA-GQLG 204
VY FG + GQLG
Sbjct: 174 VYAFGFNKRGQLG 186
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
+ +V WG LG G + T VP + SL+ I HS FV+D+G +++C
Sbjct: 60 ECGDVATWGRGQAGALGHGDETTITVPRFISSLQGIRISHAAAGWNHSAFVTDNGALYTC 119
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS-GS-----VFV 140
G G G+LG G S + P ++ + + M + H++ L ++ GS V+
Sbjct: 120 GDGTFGQLGHGHTESRLVPGRVEHLSSER---INMVACGMRHTLALAVTQGSVCTSIVYA 176
Query: 141 CGLNSFHQLGL 151
G N QLG+
Sbjct: 177 FGFNKRGQLGI 187
>gi|118363796|ref|XP_001015122.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89296889|gb|EAR94877.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 1387
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N+++ WG N LG L+D I V HS F++ ++S G
Sbjct: 204 NQLFSWGRNNEGQLG-----------LVDK----KIVNVFSGWNHSFFITKQNELYSFGS 248
Query: 89 GQGGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G G+LG G E+S+ K L EKD+ + +A + HS+ L G VF CG N
Sbjct: 249 GLYGQLGQGKCENSITPDKVLYHEKDQKIIKIACG---ETHSLLLSEQGQVFACGENQRG 305
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFH-SVVYSSREVYTFG 197
QLGL ++ P + +L +S+ +I + CGRF ++ ++ +Y +G
Sbjct: 306 QLGLGRNKKVVLQPQYLSNENLFASESIIDIACGRFSVAITQKTQSLYAWG 356
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 112 EVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 171
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ + K+ V +A Q S+ ++ +G VFV G N Q
Sbjct: 172 NNSGQVGSGSTANQPIPRRVT-GCLQSKVVVNIAC-GQMCSMAVVNTGEVFVWGYNGNGQ 229
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 230 LGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 285
Query: 206 --------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 286 NKSNQSYPTPVVVEKDRIIE 305
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 58 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHIVLATTEGEVFT 115
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ ++ + P ++ +K + VA S HS+ L G VF G N
Sbjct: 116 WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 172
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR + S+ ++ + CG+ S+ V ++ EV+ +G +
Sbjct: 173 NSGQVG-----SGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGN 227
Query: 201 GQLG 204
GQLG
Sbjct: 228 GQLG 231
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 64 IKQVCMDKFHS---VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
++Q C+ S ++ + + ++ G G LGLG S + P++L+ K ++
Sbjct: 38 VRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLS 97
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCC 180
S H V G VF G N++ QLG + +V P S+ S++ +I V C
Sbjct: 98 YG--SGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLV---PYHISTNLSNKQVIEVAC 152
Query: 181 GRFHSVVYSSR-EVYTFGI-HAGQLG 204
G +HS+V +S EV+ +G ++GQ+G
Sbjct: 153 GSYHSLVLTSDGEVFAWGYNNSGQVG 178
>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
Length = 1344
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 35/209 (16%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WGT LG G + P+L++ L + I V FH++ ++ G V++ G G+
Sbjct: 417 LYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQGTVYAFGQGK 476
Query: 91 GGRLGLG---SESSVVSPKKLNFEK---------DKDKLGVAMASISQDHSVFLMLSGSV 138
G+LG+ E P+K++F K +DK +A+ +HS+ L SG +
Sbjct: 477 YGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLAKSGKI 536
Query: 139 FVCGLNSFHQLG------------LSPPPSHIVSPTP-----IPRSSLKS----SQPLIG 177
+ G N LG + P ++ P I R LK S +I
Sbjct: 537 YSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQEETFSYEVIQ 596
Query: 178 VCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
V CG ++V + + EVY FG +A GQL
Sbjct: 597 VACGVLNTVSLTNGGEVYVFGSNAYGQLA 625
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 9/186 (4%)
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
I QV H + +++D ++S G GQ G LG G+ + P+ L EK + +
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIA 350
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
+ HS+ L + G +LG +V P L +P+ + G
Sbjct: 351 CGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLV---PKEIYDLSKKKPIF-ISAGES 406
Query: 184 HSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSA-SVIEPKVQATIIREDLPGF--IFESNR 238
HS S + +YT+G G+LGH T +IE Q II F + + +
Sbjct: 407 HSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQ 466
Query: 239 GTKHSF 244
GT ++F
Sbjct: 467 GTVYAF 472
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 25/183 (13%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRDVP---ELLDSLKRASIKQVCMDKFHSVFVSD----- 79
F E+++ G N LG G + L+ +L A IK V H + ++D
Sbjct: 739 FGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNL--APIKSVACGPNHMLAIADYNPDH 796
Query: 80 ---DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSG 136
DG +S G G+LG+GS+ PKK++ K++ K + QD S+ L
Sbjct: 797 PIKDGMCYSWGRNWKGQLGIGSKEDSNVPKKIHNAKERFK----KVACGQDFSIGLTYGN 852
Query: 137 SVFVCGLNSFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVYSSREVY 194
V++ G N + S I IP+ +L+ +Q C +F SV+ E+
Sbjct: 853 QVYLWGNNKYF------CDSKITKDVDIPQLLQALEQAQIKDIACSYKFCSVLNDKGEIL 906
Query: 195 TFG 197
+G
Sbjct: 907 IWG 909
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++ WG LG G + VP+ + L + + + HS +S+ +++ G G
Sbjct: 364 KILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGESHSAAISEKLNLYTWGTG 423
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G ++S PK + +D D+ + S H++ + G+V+ G + +L
Sbjct: 424 TYGRLGHGMDTSEKKPKLI---EDLDQYEIIHVSCGAFHTLAITGQGTVYAFGQGKYGKL 480
Query: 150 GLSPPPSHIVSPTP 163
G++ V P
Sbjct: 481 GINRKQREGVFSRP 494
>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
Length = 1199
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ T + P + +LK +K + H++ ++ G+V++ G
Sbjct: 44 NKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYASGG 103
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG S ++F + K + S + S L G +F+ G NS Q
Sbjct: 104 NNEGQLGLGDTDERNSFHLISFFTSQRK--IKQLSAGSNTSAALTEDGELFMWGDNSEGQ 161
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL ++ +P+ + +P+ + CG +HS V + E+YTFG +G+LG
Sbjct: 162 IGLKN-----ITNVCVPQ-QVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLG 213
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 19 RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFV 77
R + S + +VY G N LG G R+ L+ + IKQ+ S +
Sbjct: 86 RNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAAL 145
Query: 78 SDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS 137
++DG ++ G G++GL + ++V P+++ K ++ S HS F+ G
Sbjct: 146 TEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKP-----ISWISCGYYHSAFVTTEGE 200
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
++ G +LGL P ++ +P+S + ++ V CG H+VV + + VYTFG
Sbjct: 201 LYTFGEPESGKLGL---PKQLLVNHRMPQSVPGIPEKVVQVACGGGHTVVLTEKAVYTFG 257
Query: 198 I-HAGQLG 204
+ GQLG
Sbjct: 258 LGQFGQLG 265
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 31/200 (15%)
Query: 10 RPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM 69
R I L + + E+++WG N+ +G + VP+ + K I +
Sbjct: 130 RKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGK--PISWISC 187
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKL--NFEKDKDKLG----VAMAS 123
+HS FV+ +G +++ G + G+LGL PK+L N + G V +
Sbjct: 188 GYYHSAFVTTEGELYTFGEPESGKLGL--------PKQLLVNHRMPQSVPGIPEKVVQVA 239
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR-----SSLKSSQPLIGV 178
H+V L +V+ GL F QLGL + TP+P+ LK S +
Sbjct: 240 CGGGHTVVLT-EKAVYTFGLGQFGQLGLGT----FLFETPVPKVIEHIKDLKISS----I 290
Query: 179 CCGRFHSVVYSSREV-YTFG 197
CG H+ + + + YTFG
Sbjct: 291 FCGENHTALITDLGLMYTFG 310
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+S+V P K L EK V A+
Sbjct: 32 CGDE-HTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEK------VKFAAC 84
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G V+ G N+ QLGL
Sbjct: 85 GRNHTLVSTEGGKVYASGGNNEGQLGL 111
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY +G LG G+ VP++++ +K I + + H+ ++D G +++ G G
Sbjct: 253 VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDG 312
Query: 90 QGGRLGLGSES 100
+ G+LGLG E+
Sbjct: 313 RHGKLGLGLEN 323
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 95 EVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ + K+ V +A Q S+ ++ +G VFV G N Q
Sbjct: 155 NNSGQVGSGSTANQPIPRRVT-GCLQSKVVVNIAC-GQMCSMAVVNTGEVFVWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 213 LGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 206 --------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 269 NKSNQSYPTPVVVEKDRIIE 288
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 41 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHIVLATTEGEVFT 98
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ ++ + P ++ +K + VA S HS+ L G VF G N
Sbjct: 99 WGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 155
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR + S+ ++ + CG+ S+ V ++ EV+ +G +
Sbjct: 156 NSGQVG-----SGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGN 210
Query: 201 GQLG 204
GQLG
Sbjct: 211 GQLG 214
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 64 IKQVCMDKFHS---VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
++Q C+ S ++ + + ++ G G LGLG S + P++L+ K ++
Sbjct: 21 VRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLS 80
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCC 180
S H V G VF G N++ QLG + +V P S+ S++ +I V C
Sbjct: 81 YG--SGPHIVLATTEGEVFTWGHNAYSQLGNGTTNAGLV---PYHISTNLSNKQVIEVAC 135
Query: 181 GRFHSVVYSSR-EVYTFGI-HAGQLG 204
G +HS+V +S EV+ +G ++GQ+G
Sbjct: 136 GSYHSLVLTSDGEVFAWGYNNSGQVG 161
>gi|149044295|gb|EDL97616.1| rCG42876 [Rattus norvegicus]
Length = 637
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ +D G V++ G
Sbjct: 92 NKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGG 151
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++ F D + S + S L G +F+ G NS Q
Sbjct: 152 NNEGQLGLGDTDDRDTFHQIGFFTPSDI--IKQLSAGANTSAALTEDGKLFMWGDNSEGQ 209
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPV 208
+GL S++ P + +P+ + CG +HS + + VY FG+ GQ G +
Sbjct: 210 IGLK-NKSNVCIP-----HEVTVGKPISWISCGYYHSAFVTKKVVYAFGL--GQFGQLGL 261
Query: 209 TVSSASVIEPKV 220
EPK+
Sbjct: 262 GTFLFETSEPKI 273
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 31 VYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY +G LG G+ +T + P+++D +K I + + H+ ++D G +++ G
Sbjct: 248 VYAFGLGQFGQLGLGTFLFETSE-PKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGD 306
Query: 89 GQGGRLGLGSES 100
G+ G+LGLG E+
Sbjct: 307 GRHGKLGLGMEN 318
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 9/181 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG NLG G + R +PE + S+ + V H++ VS G +++ G
Sbjct: 201 DLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWS 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G + P KL KD ++ S H++ L G ++ G N F Q+
Sbjct: 261 KYGQLGHGDFEDHLVPHKLEALKDTT---ISQISGGWRHTMALAADGKLYGWGWNKFGQV 317
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHSP 207
G+ H SP + + + Q ++ V CG H++ + ++ V+++G +GQLGH
Sbjct: 318 GVGDNEDH-CSPVQV---NFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGE 373
Query: 208 V 208
+
Sbjct: 374 I 374
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 11/184 (5%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S++ ++Y WG LG G+ P+ + +L+ I Q+ H + V+ G V
Sbjct: 92 SDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVH 151
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
S G Q G+LGLG+ + P+K+ FE + V M + +H+ + G ++ G
Sbjct: 152 SWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR----VKMIAAGAEHTAAVTEDGDLYGWGW 207
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
+ LGL ++ P SS+ + Q ++ V CG H++ V SS +YT+G G
Sbjct: 208 GRYGNLGLGDRDDRLI---PEKVSSV-NGQKMVLVACGWRHTITVSSSGSIYTYGWSKYG 263
Query: 202 QLGH 205
QLGH
Sbjct: 264 QLGH 267
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N N LG G+ + +P+ + + + +K + H+ V++DG ++ G G+
Sbjct: 150 VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGR 209
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G LGLG + P+K++ + + + + H++ + SGS++ G + + QLG
Sbjct: 210 YGNLGLGDRDDRLIPEKVSSVNGQK---MVLVACGWRHTITVSSSGSIYTYGWSKYGQLG 266
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
H+V P +LK + + + G H++ ++ ++Y +G + GQ+G
Sbjct: 267 HGDFEDHLV---PHKLEALKDTT-ISQISGGWRHTMALAADGKLYGWGWNKFGQVG 318
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD 80
I VSS+ +Y +G + LG G + VP L++LK +I Q+ H++ ++ D
Sbjct: 246 ITVSSS--GSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAAD 303
Query: 81 GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
G+++ G + G++G+G SP ++NF ++ + VA H++ L + +VF
Sbjct: 304 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACG---WRHTLALTEAKNVFS 360
Query: 141 CGLNSFHQLG 150
G + QLG
Sbjct: 361 WGRGTSGQLG 370
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTR---DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
E+Y WG+N LG S + P L +L + + HS +S G V+
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LGL E++ P +L K LGV + + SVFL G VF CG ++
Sbjct: 223 GRNNCGQLGLNDETNRSYPTQL---KTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAY 279
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGI-HAGQ 202
QLG S +PR ++ + V CG H+ +V S VY FG+ +GQ
Sbjct: 280 GQLG-----HGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQ 334
Query: 203 LGHSPVTVSSASVIEPKV 220
LG T S+ S++ P+V
Sbjct: 335 LG----TRSTKSLMLPQV 348
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY G+N LG R P L+ L+ I Q+C HS+ +SD G+V S G
Sbjct: 60 KVYACGSNDYSQLGHDLPTKR--PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117
Query: 90 QGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG ++ +V PK + K + +A + +HS+ L G ++ G N + Q
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGN---NHSLALTSCGELYSWGSNIYGQ 174
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
LG++ P P+ ++L PL + CG HS + S S V+ +G + GQLG
Sbjct: 175 LGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG 231
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 82 RVWSCGHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
++ G G+LGLG + +++P ++ + D V + H++FL +G V+
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDT---AVQQVACGHRHTLFLTATGKVY 62
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
CG N + QLG P P IP +I +CCG HS+ S +V ++G
Sbjct: 63 ACGSNDYSQLGHDLPTKR---PLLIPE---LQDYVIIQICCGSRHSLALSDWGQVLSWGD 116
Query: 199 H-AGQLGHSPVTVSSASVIE-PKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGG 256
+ GQLGH+ + +++ PKV +R+ + + + G HS A TS G +
Sbjct: 117 NDCGQLGHA----TDKEIVQLPKV----VRQLVTKTVVQIACGNNHSL-ALTSCGELYSW 167
Query: 257 G 257
G
Sbjct: 168 G 168
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y WG+ ++ LG G + + P + +++QV H++F++ G+V++CG
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+LG + + + L + +D + + + S+ HS+ L G V G N
Sbjct: 66 SNDYSQLG----HDLPTKRPLLIPELQDYVIIQICCGSR-HSLALSDWGQVLSWGDNDCG 120
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQLG- 204
QLG + + P + + K+ ++ + CG HS+ +S E+Y++G + GQLG
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKT---VVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Query: 205 HSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+SP ++ + P T++ L G HSF S G FG G
Sbjct: 178 NSPNDLTHCNY--PLRLTTLLGIPLAAIAC----GGNHSFLISKS-GAVFGWG 223
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTR---DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
E+Y WG+N LG S + P L +L + + HS +S G V+
Sbjct: 163 ELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LGL E++ P +L K LGV + + SVFL G VF CG ++
Sbjct: 223 GRNNCGQLGLNDETNRSYPTQL---KTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAY 279
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGI-HAGQ 202
QLG S +PR ++ + V CG H+ +V S VY FG+ +GQ
Sbjct: 280 GQLG-----HGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQ 334
Query: 203 LGHSPVTVSSASVIEPKV 220
LG T S+ S++ P+V
Sbjct: 335 LG----TRSTKSLMLPQV 348
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY G+N LG R P L+ L+ I Q+C HS+ +SD G+V S G
Sbjct: 60 KVYACGSNDYSQLGHDLPTKR--PLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117
Query: 90 QGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG ++ +V PK + K + +A + +HS+ L G ++ G N + Q
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGN---NHSLALTSCGELYSWGSNIYGQ 174
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
LG++ P P+ ++L PL + CG HS + S S V+ +G + GQLG
Sbjct: 175 LGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAVFGWGRNNCGQLG 231
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 82 RVWSCGHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
++ G G+LGLG + +++P ++ + D V + H++FL +G V+
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDT---AVQQVACGHRHTLFLTATGKVY 62
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
CG N + QLG P P IP +I +CCG HS+ S +V ++G
Sbjct: 63 ACGSNDYSQLGHDLPTKR---PLLIPE---LQDYVIIQICCGSRHSLALSDWGQVLSWGD 116
Query: 199 H-AGQLGHSPVTVSSASVIE-PKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGG 256
+ GQLGH+ + +++ PKV +R+ + + + G HS A TS G +
Sbjct: 117 NDCGQLGHA----TDKEIVQLPKV----VRQLVTKTVVQIACGNNHSL-ALTSCGELYSW 167
Query: 257 G 257
G
Sbjct: 168 G 168
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y WG+ ++ LG G + + P + +++QV H++F++ G+V++CG
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+LG + + + L + +D + + + S+ HS+ L G V G N
Sbjct: 66 SNDYSQLG----HDLPTKRPLLIPELQDYVIIQICCGSR-HSLALSDWGQVLSWGDNDCG 120
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG- 204
QLG + + P + + K+ ++ + CG HS+ +S E+Y++G + GQLG
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKT---VVQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177
Query: 205 HSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+SP ++ + P T++ L G HSF S G FG G
Sbjct: 178 NSPNDLTHCNY--PLRLTTLLGIPLAAIAC----GGNHSFLISKS-GAVFGWG 223
>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
Length = 815
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 16/240 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G + R+ ++ IKQ+ S +++DGR++ G
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL + S+V P+++ V+ S HS F+ G ++V G +L
Sbjct: 168 SEGQIGLKNVSNVCVPQQVTIGNP-----VSWISCGYYHSAFVTTDGELYVFGEPENGKL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ + + +I V CG H+VV + VYTFG+ GQ G +
Sbjct: 223 GL---PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAVYTFGL--GQFGQLGLG 277
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKGKRLRS 268
EPKV IR+ +I + G H+ + L FG G GK G L +
Sbjct: 278 TFLFETSEPKVIEN-IRDQTISYI---SCGENHTALITDIGLMYTFGDGRHGKLGLGLEN 333
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHK--IKQLSAGSNTSAALTEDGRLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL VS +P+ + P+ + CG +HS V + E+Y FG G+LG
Sbjct: 172 IGLKN-----VSNVCVPQ-QVTIGNPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+S++ P K L EK V +A+
Sbjct: 42 CGDE-HSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGL 121
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
N VY +G LG G+ +T + P+++++++ +I + + H+ ++D G +++
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSE-PKVIENIRDQTISYISCGENHTALITDIGLMYTF 319
Query: 87 GHGQGGRLGLGSES 100
G G+ G+LGLG E+
Sbjct: 320 GDGRHGKLGLGLEN 333
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 9/181 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG NLG G + R +PE + S+ + V H++ VS G +++ G
Sbjct: 206 DLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWS 265
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G + P KL KD ++ S H++ L G ++ G N F Q+
Sbjct: 266 KYGQLGHGDFEDHLVPHKLEALKDTT---ISQISGGWRHTMALAADGKLYGWGWNKFGQV 322
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHSP 207
G+ H SP + + + Q ++ V CG H++ + ++ V+++G +GQLGH
Sbjct: 323 GVGDNEDH-CSPVQV---NFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGE 378
Query: 208 V 208
+
Sbjct: 379 I 379
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 11/184 (5%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S++ ++Y WG LG G+ P+ + +L+ I Q+ H + V+ G V
Sbjct: 97 SDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVH 156
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
S G Q G+LGLG+ + P+K+ FE + V M + +H+ + G ++ G
Sbjct: 157 SWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR----VKMIAAGAEHTAAVTEDGDLYGWGW 212
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
+ LGL ++ P SS+ + Q ++ V CG H++ V SS +YT+G G
Sbjct: 213 GRYGNLGLGDRDDRLI---PEKVSSV-NGQKMVLVACGWRHTITVSSSGSIYTYGWSKYG 268
Query: 202 QLGH 205
QLGH
Sbjct: 269 QLGH 272
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N N LG G+ + +P+ + + + +K + H+ V++DG ++ G G+
Sbjct: 155 VHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGR 214
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G LGLG + P+K++ + + + + H++ + SGS++ G + + QLG
Sbjct: 215 YGNLGLGDRDDRLIPEKVSSVNGQK---MVLVACGWRHTITVSSSGSIYTYGWSKYGQLG 271
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
H+V P +LK + + + G H++ ++ ++Y +G + GQ+G
Sbjct: 272 HGDFEDHLV---PHKLEALKDTT-ISQISGGWRHTMALAADGKLYGWGWNKFGQVG 323
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD 80
I VSS+ +Y +G + LG G + VP L++LK +I Q+ H++ ++ D
Sbjct: 251 ITVSSS--GSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAAD 308
Query: 81 GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
G+++ G + G++G+G SP ++NF ++ + VA H++ L + +VF
Sbjct: 309 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACG---WRHTLALTEAKNVFS 365
Query: 141 CGLNSFHQLG 150
G + QLG
Sbjct: 366 WGRGTSGQLG 375
>gi|440905239|gb|ELR55645.1| Secretion-regulating guanine nucleotide exchange factor, partial
[Bos grunniens mutus]
Length = 338
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 31 VYIWGTNANYNLGTGSQQ-TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++ WG N+ LG G ++ +L D K IK++ HS V+D+G ++ CG
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCGLN 76
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFH 147
+ G+LGLG V L F K LG A+ ++ D ++ L +G V CG NSF
Sbjct: 77 KDGQLGLGHTEEV-----LYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFG 131
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG+ P V P I
Sbjct: 132 QLGVPHGPRRCVIPQAI 148
>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Strongylocentrotus purpuratus]
Length = 782
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD 80
DV + +Y++G N LG G +++ + P + LK A + ++ + H++ ++ D
Sbjct: 41 FDVVITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTKD 100
Query: 81 GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
+ S G G G+LG+G +P+ + +++D L + S DHS L SG++++
Sbjct: 101 RHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYL---LLSCGTDHSAALTASGTLYM 157
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTF 196
G S QLG + IPR L P+ V CG +H+ + + +++YTF
Sbjct: 158 WGGGSEGQLGHG-----EDTEVQIPR-ELSMGVPVRMVSCGYYHTALLTEDKKLYTF 208
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 7 EEMRPIDHLIRDRKIDVSS--NQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASI 64
EE+ D+L+ D S+ +Y+WG + LG G +P L +
Sbjct: 129 EELEEQDYLLLSCGTDHSAALTASGTLYMWGGGSEGQLGHGEDTEVQIPRELSM--GVPV 186
Query: 65 KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE--SSVVSPKKLNFEKDKDKLGVAMA 122
+ V +H+ +++D ++++ G G+GG+LGLG V P+ ++F + V
Sbjct: 187 RMVSCGYYHTALLTEDKKLYTFGEGEGGKLGLGEAHLGGVNEPQHVSFFTEP----VDSV 242
Query: 123 SISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGR 182
S H+ + G V+ G + QLG P H+ + P + L+ ++ V CG
Sbjct: 243 SCGNAHTAAITEKGHVYTFGNGASGQLGHG--PDHLETNIPKRVARLEWTR-CKWVSCGD 299
Query: 183 FHSVVYSSRE-VYTFGI-HAGQLGH 205
H+ + +++ +YTFG G+LG
Sbjct: 300 CHTAIVTAKGCLYTFGDGRHGKLGQ 324
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY WG LG G+ P+ + +L+ IKQ+ H + V+ G V S G
Sbjct: 86 QVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRN 145
Query: 90 QGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G+LGLG+ + P+K+ FE + V M + +H+ + G ++ G +
Sbjct: 146 QNGQLGLGTTEDSLLPQKIQAFE----SVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 201
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LGL ++ P SS++ + ++ V CG H++ S S +YT+G GQLGH
Sbjct: 202 LGLGDRNDRLL---PEKVSSVE-GEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHG 257
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
++ KV+A +++ I + + G +H+ A TS G +G GW
Sbjct: 258 DF---EDHLVPHKVEA--LKDST---ISQISGGWRHTM-ALTSEGKLYGWGWN 301
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG NLG G + R +PE + S++ + V H++ VSD G +++ G
Sbjct: 190 DLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWS 249
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G + P K+ KD ++ S H++ L G ++ G N F Q+
Sbjct: 250 KYGQLGHGDFEDHLVPHKVEALKDST---ISQISGGWRHTMALTSEGKLYGWGWNKFGQV 306
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGI-HAGQLGHSP 207
G+ H SP + S Q + V CG H++ S ++ V+++G +GQLG+
Sbjct: 307 GVGNNDDH-SSPGQV---SFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGE 362
Query: 208 VTVSSASVI 216
+ + V+
Sbjct: 363 IVDRNTPVL 371
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV WG N N LG G+ + +P+ + + + +K + H+ V++DG ++ G G
Sbjct: 138 EVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWG 197
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G LGLG + + P+K+ + E +K + + + H++ + SG+++ G + + Q
Sbjct: 198 RYGNLGLGDRNDRLLPEKVSSVEGEK----MVLVACGWRHTITVSDSGNLYTYGWSKYGQ 253
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
LG H+V P +LK S + + G H++ +S ++Y +G + GQ+G
Sbjct: 254 LGHGDFEDHLV---PHKVEALKDST-ISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Meleagris gallopavo]
Length = 4334
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 3575 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 3634
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H+V + + GS V+ G + +
Sbjct: 3635 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGK 3691
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + + CG +F + VYTFG
Sbjct: 3692 LGLG-------------NSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 3737
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 55/205 (26%)
Query: 37 NANY-NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGHGQGGRL 94
N +Y LG G+ + +PE + +L+ I QV H+V VS DG VW+ G G G+L
Sbjct: 3633 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKL 3692
Query: 95 GLGSESSVVSPKKLN-------------------FEKD-------KDKL----------- 117
GLG+ ++ SP+K++ KD +D+L
Sbjct: 3693 GLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3752
Query: 118 ----------GVAMASIS--QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
GV + I+ +H++ L +G V+ G NS QLGL +H+ PT I
Sbjct: 3753 NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLG-HTNHVREPTLI- 3810
Query: 166 RSSLKSSQPLIGVCCGRFHSVVYSS 190
++ + + + GR HS +++
Sbjct: 3811 --TVLQGKNIRQISAGRCHSAAWTA 3833
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 42 LGTGSQQTRDVPELLDSLKRASIKQV---CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGS 98
LG G+ V ++ +L+ + Q+ C HS+ +++ G V+S G G G+LG G+
Sbjct: 3532 LGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN 3591
Query: 99 ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHI 158
P+++ + ++ V S HS + G +F G + +LGL +
Sbjct: 3592 SDRQRRPRQIEALQGEE---VVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKK 3648
Query: 159 VSPTPIPRSSLKSSQPLIG-VCCGRFHSVVYS--SREVYTFG 197
+ P ++L+ Q IG V CG H+V S V+ FG
Sbjct: 3649 L---PERVTALEGYQ--IGQVACGLNHTVAVSMDGSMVWAFG 3685
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 8/169 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3471 DVYLWGAGRHGQLAEAGRNVM-VPVAAPSFSQA--QQVVCGQNCTFVIQANGTVLACGEG 3527
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 3528 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 3587
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFG 197
G P +L+ + ++ + CG HS VV + +++TFG
Sbjct: 3588 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTADGKLFTFG 3632
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPCFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ + Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4083 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4142
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + L + + +H++ + GS V+ G + +
Sbjct: 4143 DYGRLGLGNTSNKKLPERVTA---LEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGK 4199
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4200 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4245
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4135 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGD 4194
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4195 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4254
Query: 118 ----------------GVAMASIS--QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
G+ + I+ +H++ L SG V+ G NS QLGL +H+
Sbjct: 4255 GRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLG-HTNHVR 4313
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + ++L+ + + GR HS +++ V
Sbjct: 4314 EPTLV--TALQGKN-IRQISAGRCHSAAWTAAPV 4344
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 42 LGTGSQQTRDVPELLDSLKRASIKQV---CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGS 98
LG G+ V ++ +L+ + Q+ C HS+ +++ G V+S G G G+LG G+
Sbjct: 4040 LGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN 4099
Query: 99 ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHI 158
P+++ + ++ V S HS + G +F G + +LGL +
Sbjct: 4100 SDRQRRPRQIEALQGEE---VVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKK 4156
Query: 159 VSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS--REVYTFG 197
+ L Q V CG H++ S+ V+ FG
Sbjct: 4157 LPERVTALEGLHIGQ----VACGLNHTLAVSADGSLVWAFG 4193
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V++WG + L + +P S +A +QV + + + +G V +CG G
Sbjct: 3979 DVFLWGAGRHGQLAEAGRNVM-IPSGAGSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4035
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4036 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4095
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV + +++TFG G G +
Sbjct: 4096 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTADGKLFTFG--NGDYGRLGL 4149
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G I + G H+ +A+ SL FG G GK G
Sbjct: 4150 GNTSNKKLPERVTA------LEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLG 4201
>gi|296086438|emb|CBI32027.3| unnamed protein product [Vitis vinifera]
Length = 405
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 21/231 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS---IKQVCMDKFHSVFVSDDGRVWSC 86
E++ WG + LGT + +P+LLD + +S I + H + ++ DG+V +
Sbjct: 21 EIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTW 80
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G G+LG G S + PK + K + + S HS F+ +G +F CG SF
Sbjct: 81 GRGTSGQLGHGDMVSSLQPKHV---KLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSF 137
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV------YSSREVYTFGI-H 199
QLG SH SP + S S+ + + CG HS+V S +VY FG
Sbjct: 138 GQLGHGDCKSH-CSPVKV---SYFDSKHVDQIACGMRHSLVLLKGTGLSGDQVYGFGSGK 193
Query: 200 AGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSL 250
GQLG S S SV QAT+ E + ++N + +A L
Sbjct: 194 RGQLGVSMDNTRSISV----PQATVGLEGVEIISIDANGDHSAALSANGHL 240
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 17/177 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V WG + LG G + P+ + L+ + V HS FVSD G +++CG G
Sbjct: 76 KVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDG 135
Query: 90 QGGRLGLGSESSVVSPKKLNF--EKDKDKLGVAMASISQDHSVFLM----LSGS-VFVCG 142
G+LG G S SP K+++ K D++ M HS+ L+ LSG V+ G
Sbjct: 136 SFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMR-----HSLVLLKGTGLSGDQVYGFG 190
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
QLG+S + +S +P++++ +I + HS S+ +YT+G
Sbjct: 191 SGKRGQLGVSMDNTRSIS---VPQATVGLEGVEIISIDANGDHSAALSANGHLYTWG 244
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 20/238 (8%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S +VY WG LG G+ P+ + +L+ IKQ+ H + V+ G V
Sbjct: 92 SEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQ 151
Query: 85 SCGHGQGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
S G Q G+LGLG+ + P+K+ +FE + V M + +H+ + G ++ G
Sbjct: 152 SWGRNQNGQLGLGTTEDSLLPQKIQSFE----GVCVKMIAAGAEHTAAVTEDGDLYGWGW 207
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
+ LGL +V P SS++ + ++ + CG H++ V SS +YT+G G
Sbjct: 208 GRYGNLGLGDRNDRLV---PEKVSSVEGEK-MVLIACGWRHTITVSSSGSLYTYGWSKYG 263
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
QLGH ++ K++A I + + G +H+ A TS G +G GW
Sbjct: 264 QLGHGDF---EDHLVPHKLEALKDSS-----ISQISGGWRHTM-ALTSDGKLYGWGWN 312
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 9/181 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG NLG G + R VPE + S++ + + H++ VS G +++ G
Sbjct: 201 DLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWS 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G + P KL KD ++ S H++ L G ++ G N F Q+
Sbjct: 261 KYGQLGHGDFEDHLVPHKLEALKDSS---ISQISGGWRHTMALTSDGKLYGWGWNKFGQV 317
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGI-HAGQLGHSP 207
G+ H P+ + Q + V CG H++ ++ ++ V+++G +GQLGH
Sbjct: 318 GVGDTDDHCF---PV-QVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGE 373
Query: 208 V 208
+
Sbjct: 374 I 374
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV WG N N LG G+ + +P+ + S + +K + H+ V++DG ++ G G
Sbjct: 149 EVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWG 208
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G LGLG + + P+K+ + E +K + + + H++ + SGS++ G + + Q
Sbjct: 209 RYGNLGLGDRNDRLVPEKVSSVEGEK----MVLIACGWRHTITVSSSGSLYTYGWSKYGQ 264
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
LG H+V P +LK S + + G H++ +S ++Y +G + GQ+G
Sbjct: 265 LGHGDFEDHLV---PHKLEALKDSS-ISQISGGWRHTMALTSDGKLYGWGWNKFGQVG 318
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD 80
I VSS+ +Y +G + LG G + VP L++LK +SI Q+ H++ ++ D
Sbjct: 246 ITVSSS--GSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALTSD 303
Query: 81 GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
G+++ G + G++G+G P ++ F +D+ VA + H++ +VF
Sbjct: 304 GKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQK---VAQVACGWRHTLAFTEKKNVFS 360
Query: 141 CGLNSFHQLG 150
G + QLG
Sbjct: 361 WGRGTSGQLG 370
>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
Length = 1203
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP ++ +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 293 NKSNQSYPTPVTVEKDRIIE 312
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+E+++ GTN LG G Q+ P LDSL I + H V + +G V++ G
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWG 124
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + + P +++ +K + VA S HS+ L G VF G N+
Sbjct: 125 HNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYNNS 181
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQLG
Sbjct: 182 GQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 27/177 (15%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL- 117
I+Q C+ F S ++ + + ++ G G LGLG S + P++L D L
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRL------DSLS 96
Query: 118 GVAMASISQD---HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQP 174
G +AS+S H V G VF G N++ QLG + +H + P I S+ S++
Sbjct: 97 GKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCQI--STNLSNKQ 153
Query: 175 LIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
+I V CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
>gi|115496664|ref|NP_001069489.1| secretion-regulating guanine nucleotide exchange factor [Bos
taurus]
gi|117940126|sp|Q3MHW0.1|SRGEF_BOVIN RecName: Full=Secretion-regulating guanine nucleotide exchange
factor
gi|75773727|gb|AAI04611.1| Secretion regulating guanine nucleotide exchange factor [Bos
taurus]
gi|296480129|tpg|DAA22244.1| TPA: secretion-regulating guanine nucleotide exchange factor [Bos
taurus]
Length = 464
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 31 VYIWGTNANYNLGTGSQQ-TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++ WG N+ LG G ++ +L D K IK++ HS V+D+G ++ CG
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCGLN 76
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFH 147
+ G+LGLG V L F K LG A+ ++ D ++ L +G V CG NSF
Sbjct: 77 KDGQLGLGHTEEV-----LYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFG 131
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG+ P V P I
Sbjct: 132 QLGVPHGPRRCVIPQAI 148
>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
harrisii]
Length = 552
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 114/236 (48%), Gaps = 27/236 (11%)
Query: 3 VMDNEEMRPIDHLIRDRKIDVS---------SNQFNEVYIWGTNANYNLGTGSQQTRDVP 53
++ + E R +DHL + +S + EVY WG NA LG G+ VP
Sbjct: 84 ILHSIEPRRVDHLCGKKIACLSYGSGPHVVIATDEGEVYTWGHNAYNQLGNGTTNHGLVP 143
Query: 54 ELLDS-LKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
+ + L + +V HS+ ++ DG V++ G+ G++G GS ++ P+K+
Sbjct: 144 THISTNLGNRKVIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRKVT-GC 202
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
++K+ +A Q S+ ++ SG V+V G N QLGL + PTP ++L+
Sbjct: 203 LQNKIATTIAC-GQMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQ---PTPCRIAALQGI 258
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH---------SPVTVSSASVIE 217
+ + + CG H++V + +Y +G ++ GQLG +PV+V VIE
Sbjct: 259 R-VHKIVCGYAHTLVLTDEGHLYAWGANSYGQLGTGNKSNQSYPTPVSVEKDRVIE 313
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---------HSV 75
S + +EV++ GTN + LGTG ++L S++ + +C K H V
Sbjct: 62 STENDEVFVLGTNCSGCLGTG--------DILHSIEPRRVDHLCGKKIACLSYGSGPHVV 113
Query: 76 FVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
+D+G V++ GH +LG G+ + + P ++ K V + HS+ L
Sbjct: 114 IATDEGEVYTWGHNAYNQLGNGTTNHGLVPTHISTNLGNRK--VIEVACGSHHSLVLTSD 171
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG--VCCGRFHSV-VYSSRE 192
G VF G N+ Q+G S + PIPR Q I + CG+ S+ V S E
Sbjct: 172 GEVFAWGYNNSGQVG-----SGSTANQPIPRKVTGCLQNKIATTIACGQMCSMAVVESGE 226
Query: 193 VYTFGIHA-GQLG 204
VY +G + GQLG
Sbjct: 227 VYVWGYNGNGQLG 239
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 31 VYIWGTNANYNLGTG--SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY WG + LG G S Q R VP +D+L I Q+ H+V ++++G V++ G
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVP--IDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G GRLG G P+ + + K+ V S H+ + +SG ++ G + +
Sbjct: 61 GDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSY---HTAAVTVSGDLYTWGGGMYGK 117
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV-YSSREVYTFG 197
LG H TP +LKS Q + V CG H+VV +++VYT+G
Sbjct: 118 LGHGNETGH---STPYLVETLKSMQ-VRQVACGSRHTVVLLENKDVYTWG 163
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 11 PIDHLIRDRKIDVSS--------NQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRA 62
PID L R + ++ + EVY WG + LG G + VP L++ L+
Sbjct: 27 PIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGK 86
Query: 63 SIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMA 122
+I+QV +H+ V+ G +++ G G G+LG G+E+ +P + K VA
Sbjct: 87 NIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACG 146
Query: 123 SISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGR 182
S H+V L+ + V+ G G H P P+ KS ++ +
Sbjct: 147 S---RHTVVLLENKDVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKS---IVQISACG 200
Query: 183 FHSVVYSS-REVYTFGI-HAGQLGHS 206
FH+ S EV+TFG G+LGH+
Sbjct: 201 FHTAALSEFGEVFTFGEGKFGRLGHN 226
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 26 NQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWS 85
++F EV+ +G LG S++ + V +D+L +KQV FH+ V++ G V++
Sbjct: 207 SEFGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYT 266
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G G+ G+LG G + + P ++ E +KL V + H+V L +G V+ G
Sbjct: 267 WGGGEHGQLGHGDKVNKTVPTRV--ESLLEKL-VLQITCGWSHTVTLTDTGEVYTWGNGD 323
Query: 146 FHQLGLSPPPSHIVSPTPI 164
+LG + + P P+
Sbjct: 324 HGKLG-HNDTAKVTLPKPV 341
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 14/193 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+VY WG N G G + +P ++ L+ SI Q+ FH+ +S+ G V++ G
Sbjct: 158 DVYTWGDKENGVSGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGE 217
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ GRLG SE + + ++ K VA H+ + +G V+ G Q
Sbjct: 218 GKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGF---HTAAVTETGEVYTWGGGEHGQ 274
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LG + V PT + S L+ + ++ + CG H+V + + EVYT+G G+LGH+
Sbjct: 275 LGHGDKVNKTV-PTRV-ESLLE--KLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHN 330
Query: 207 PVTVSSASVIEPK 219
+A V PK
Sbjct: 331 ----DTAKVTLPK 339
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 10 RPIDHLIRDRKIDVSSNQFN--------EVYIWGTNANYNLGTGSQQTRDVPELLDSLKR 61
R +D L R V+ F+ EVY WG + LG G + + VP ++SL
Sbjct: 235 RFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLE 294
Query: 62 ASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAM 121
+ Q+ H+V ++D G V++ G+G G+LG + V PK ++ K + VA
Sbjct: 295 KLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLDGKRVISVAS 354
Query: 122 ASISQDHSVFLM 133
+ +H+V L+
Sbjct: 355 YN---EHTVALV 363
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 19/232 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY WG + LG G + V P +D +S++Q H++ ++ DG+++SCG+
Sbjct: 3 VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ LG ++ + K+ F + V S HS+ L G VF G NS Q
Sbjct: 63 NDHGQ--LGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQ 120
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG +P I + K+ ++ + G+FHS+ + S E++++G + GQLG
Sbjct: 121 LGHDTDLQTYTTPRMIKTIATKT---VVQIASGQFHSLALTNSGELFSWGANGYGQLG-- 175
Query: 207 PVTVSSASVIEPKVQATIIREDLP-GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + V+ P + ++ +P FI G HSF S G FG G
Sbjct: 176 -LGTTGEKVVTPTLVKSL--AGIPIAFI---ACGGNHSFAVSKS-GAIFGWG 220
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 92/186 (49%), Gaps = 9/186 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ + +V+ WG+N+ LG + QT P ++ ++ ++ Q+ +FHS+ +++ G
Sbjct: 102 LALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSG 161
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
++S G G+LGLG+ VV+P + K + +A + +HS + SG++F
Sbjct: 162 ELFSWGANGYGQLGLGTTGEKVVTPTLV---KSLAGIPIAFIACGGNHSFAVSKSGAIFG 218
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHA 200
G N+F QLGL+ S P +L++ C F + + V+T G
Sbjct: 219 WGKNTFGQLGLNDLVSRCF---PQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGT 275
Query: 201 -GQLGH 205
GQLGH
Sbjct: 276 FGQLGH 281
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
++ WG N LG +R P+ L +L+ ++ + C D F S F++ +G V++CG G
Sbjct: 216 IFGWGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDF-SAFLTQEGGVFTCGAG 274
Query: 90 QGGRLGLGSESSVVSPK 106
G+LG G+ S+ + P+
Sbjct: 275 TFGQLGHGTCSNEILPR 291
>gi|301753052|ref|XP_002912363.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
Nek8-like [Ailuropoda melanoleuca]
Length = 699
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 17/196 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+ +G+ +N LG GS P ++++L + QV H + +S + +++ G G
Sbjct: 419 IMTFGSGSNGCLGHGSLNDLSQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGD 478
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLGLG+ S P++++ ++ V D S+ L + G CG N F++LG
Sbjct: 479 SGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGI---DSSMILTVPGGALACGSNRFNKLG 535
Query: 151 L--------SPPPSHI---VSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI 198
L S P + +S TP+ + L +PL+ V G HS V +S + YTFG
Sbjct: 536 LDHLSLGEESAPHQQVEEALSFTPLGSAPL-DQEPLLSVDLGTAHSAAVTASGDCYTFGS 594
Query: 199 HA-GQLGHSPVTVSSA 213
+ GQLG + VS A
Sbjct: 595 NQHGQLGTNARRVSRA 610
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 15/187 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E++ WG + LG G++++ P+ + ++V S+ ++ G +CG
Sbjct: 470 ELFAWGRGDSGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGIDSSMILTVPGGALACGSN 529
Query: 90 QGGRLG-----LGSESSVVS--PKKLNF----EKDKDKLGVAMASISQDHSVFLMLSGSV 138
+ +LG LG ES+ + L+F D+ + + HS + SG
Sbjct: 530 RFNKLGLDHLSLGEESAPHQQVEEALSFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDC 589
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI 198
+ G N QLG + + VS P L++ + ++ C F + + EVY++G
Sbjct: 590 YTFGSNQHGQLGTN---ARRVSRAPCQVQGLQNMKIVMVACGDAFTVAIGAEGEVYSWGK 646
Query: 199 HA-GQLG 204
A G+LG
Sbjct: 647 GARGRLG 653
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGH 88
+ Y +G+N + LGT +++ P + L+ I V C D F +V + +G V+S G
Sbjct: 588 DCYTFGSNQHGQLGTNARRVSRAPCQVQGLQNMKIVMVACGDAF-TVAIGAEGEVYSWGK 646
Query: 89 GQGGRLGLGSESS 101
G GRLG E +
Sbjct: 647 GARGRLGRRDEDA 659
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 29 NEVYIWGTNANYNLG--TGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFV-SDDGRVW 84
+V++WG N LG GS+ +T + E L SLK C S+FV + +G+V+
Sbjct: 2206 TKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVV----CCAGGSKSLFVVTAEGKVY 2261
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
+CG G GRLGLGS +V PK++N VA+ S + H++ L + G VF G
Sbjct: 2262 ACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGR-HAMALTVDGKVFSWGEG 2320
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQ 202
+LG S + P +LK+ + + + CG HS V SS E+YT+G+ G+
Sbjct: 2321 DDGKLG---HLSRMNCEKPRLLEALKTKR-IRDIACGSSHSAAVTSSGELYTWGLGEYGR 2376
Query: 203 LGHSPVTVSSASVIEPKVQATII 225
LGH S + + PK+ ++
Sbjct: 2377 LGHG----DSTTQLRPKLVKALV 2395
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 28/237 (11%)
Query: 6 NEEMRP--IDHLIRDRKIDVSS----------NQFNEVYIWGTNANYNLGTGSQQTRDVP 53
+++RP D L R IDV+ + + V+ WG LG G VP
Sbjct: 3358 EDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVP 3417
Query: 54 ELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
+ +D+L + +V C +F S+ ++ G V++ G G RLG GS+ V P+K+ +
Sbjct: 3418 QKVDALSSIGVCKVECGSQF-SIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQ 3476
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
K + +A S+ H V G V+ G N QLG + I P + ++L+
Sbjct: 3477 GKKIISIATGSL---HCVACSDQGEVYTWGDNDEGQLG-DGTTNAIQRPRIV--TALQDK 3530
Query: 173 QPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
+ + V CG H+V +S+ + +HAG+L P TV + +V +IR L
Sbjct: 3531 K-ITNVACGSAHTVAWSTSK----PLHAGRL---PQTVPMEYNLLREVNIPVIRNRL 3579
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 7/177 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG N LG VP ++SL Q+ + V+ DG++++ G+G
Sbjct: 3183 IYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGYGA 3242
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG+G SV +P L + VA+ S + H++ L + G V+ G +LG
Sbjct: 3243 SGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGK-HALALSVEGEVYSWGEGEDGKLG 3301
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLGH 205
+ P SL+ + +I + CG HS V SS E+YT+G G+LGH
Sbjct: 3302 HG---NRTQCDRPRVIESLRGKE-VIDIACGGAHSACVTSSGELYTWGKGRYGRLGH 3354
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 91/228 (39%), Gaps = 57/228 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG + LG G++ D P +++SL+ + + HS V+ G +++ G G
Sbjct: 3288 EVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKG 3347
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS-------ISQDHSVF----------- 131
+ GRLG G + PK + K + VA S IS D +V+
Sbjct: 3348 RYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLG 3407
Query: 132 ---------------------------------LMLSGSVFVCGLNSFHQLGLSPPPSHI 158
L SG V+ G +H+LG H+
Sbjct: 3408 RGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHG-SDDHV 3466
Query: 159 VSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
P + ++L+ + +I + G H V S + EVYT+G + GQLG
Sbjct: 3467 RRPRKV--AALQGKK-IISIATGSLHCVACSDQGEVYTWGDNDEGQLG 3511
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
VY WG LG G + VP ++ L + Q+ C +F S+ ++ G+VW+ G G
Sbjct: 2420 VYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQF-SLALTKAGQVWTWGKG 2478
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
RLG G++S V P+ K K + VA+ ++ H + + +G VF G N Q
Sbjct: 2479 DYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGAL---HCLAVTDTGQVFAWGDNDHGQQ 2535
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSP 207
G S V+ P L+ + + V CG HS +++ + +H L +P
Sbjct: 2536 G---DGSTTVNKKPALVQGLEGVR-ITRVACGSSHSTAWATTDTAIPSMHEPVLFTTP 2589
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V+ WG + LG S+ + P LL++LK I+ + HS V+ G +++ G G
Sbjct: 2313 KVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLG 2372
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ GRLG G ++ + PK + K + VA S ++ L G V+ G F +L
Sbjct: 2373 EYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGS-RDAQTLTLTDEGMVYSWGDGDFGKL 2431
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSREVYTFG 197
G V P + R + Q +I + CG +F + + +V+T+G
Sbjct: 2432 GRGGSEGCSV-PHNVER---LNGQGVIQIECGAQFSLALTKAGQVWTWG 2476
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V+ WG + LG G+ P++ + LK I V + H + V+D G+V++ G
Sbjct: 2471 QVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDN 2530
Query: 90 QGGRLGLGSES 100
G+ G GS +
Sbjct: 2531 DHGQQGDGSTT 2541
>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 388
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG LGT Q P+LL +SI + H + ++ G+ S G G
Sbjct: 20 VWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGN 79
Query: 91 GGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G S+ + PK + D + S HS F+ +G VF CG SF QL
Sbjct: 80 SGQLGHGEVVSNTLYPKAVT---SLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQL 136
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGHSP 207
G SH +P+ S + V CG HS V+ +VY FG GQLG S
Sbjct: 137 GHGDNASHC---SPVKVSCFVDLH-VAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSN 192
Query: 208 VTVSSASVIEPKV 220
V S +V PKV
Sbjct: 193 DRVKSVNV--PKV 203
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 34 WGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGG 92
WG + LG G + + P+ + SL I V HS FVSD G V++CG G G
Sbjct: 75 WGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFG 134
Query: 93 RLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS 152
+LG G +S SP K++ D L VA + HS+ L+ V+ G QLG+S
Sbjct: 135 QLGHGDNASHCSPVKVSCFVD---LHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVS 191
Query: 153 PPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVYS-SREVYTFG 197
V +P+ S + + ++G HS S VYT+G
Sbjct: 192 NDR---VKSVNVPKVVSGFEGVE-IVGTAANGDHSAAVSVDGHVYTWG 235
>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 388
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG LGT Q P+LL +SI + H + ++ G+V S G G
Sbjct: 20 VWSWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGN 79
Query: 91 GGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G S+ + PK + D + S HS F+ +G VF CG SF QL
Sbjct: 80 SGQLGHGLVVSNSLYPKAVT---SLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQL 136
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGHSP 207
G SH SP + S Q + V CG HS V+ +VY FG GQLG S
Sbjct: 137 GHGDHASH-CSPVKV---SCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSN 192
Query: 208 VTVSSASVIEPKV 220
V S +V PKV
Sbjct: 193 DRVKSVNV--PKV 203
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 11/172 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V WG + LG G + + P+ + SL I V HS FVSD+G V++CG
Sbjct: 71 KVLSWGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGD 130
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G +S SP K++ D+ V + HS+ L+ V+ G Q
Sbjct: 131 GSFGQLGHGDHASHCSPVKVSCFVDQH---VEQVACGMRHSLVLLKGNQVYGFGSGKRGQ 187
Query: 149 LGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVYS-SREVYTFG 197
LG+S V +P+ S + + + G+ HS S VYT+G
Sbjct: 188 LGVSNDR---VKSVNVPKVVSGFEGVE-IAGIAANGDHSAAVSVDGHVYTWG 235
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 29 NEVYIWGTNANYNLGTGSQQTR--DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
N+VY +G+ LG + + + +VP+++ + I + + HS VS DG V++
Sbjct: 175 NQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTW 234
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G G E + V P+ LN L ++ +H+ L +SG VC L
Sbjct: 235 GRGF-----KGFEDARV-PQCLN-----SSLNFTKVALGWNHA--LAMSGEGEVCMLGGN 281
Query: 147 HQLGLSPPPSHIVSPTPIP---RSSLKSSQPLIG-----VCCGRFHSVVYSSR-EVYTFG 197
H LG+ +I +P +L+ L G + G HSV+ + E+ T+G
Sbjct: 282 H-LGVLSDLQNISPAKHLPHLREVNLEKVPGLDGTKITDIATGAEHSVIVTEHGEIKTWG 340
Query: 198 I-HAGQLGH-------SPVTVSSASVIEPKVQATIIREDLPGFIF 234
GQLG SPVTVS + A++I GF F
Sbjct: 341 WGEHGQLGLGDTRDRISPVTVSLGYDLNEA--ASVIVFCGSGFTF 383
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 101/233 (43%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG G+ P + +L IKQ+ H + V+ +G V S G
Sbjct: 79 EVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRN 138
Query: 90 QGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G+LGLG + P+K+ FE + K A A +H+ + G ++ G +
Sbjct: 139 QNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGA----EHTAAVTEDGDLYGWGWGRYGN 194
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHS 206
LGL +V K S V CG H++ V S +YT+G GQLGH
Sbjct: 195 LGLGDRTDRLVPERVTSTGGEKXSX----VACGWRHTISVSYSGALYTYGWSKYGQLGHG 250
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
+ +I K++A FI + + G +H+ A TS G +G GW
Sbjct: 251 DL---EDHLIPHKLEALS-----NSFISQISGGARHT-XALTSDGKLYGWGWN 294
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+S + +Y +G + LG G + +P L++L + I Q+ H+ ++ DG+
Sbjct: 228 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGK 287
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G+G+ SP ++ F D+ V S H++ + +VF G
Sbjct: 288 LYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWG 344
Query: 143 LNSFHQLGL 151
+ QLG+
Sbjct: 345 RGTNGQLGI 353
>gi|410076400|ref|XP_003955782.1| hypothetical protein KAFR_0B03500 [Kazachstania africana CBS 2517]
gi|372462365|emb|CCF56647.1| hypothetical protein KAFR_0B03500 [Kazachstania africana CBS 2517]
Length = 1317
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 34 WGTNANYNLGTGSQQTR------DVPELLDSLKRA---SIKQVCMDKFHSVFVSDDGRVW 84
+G+N +Y LGTG++ R ++ +L ++ + + IK M ++HS+ + DGR++
Sbjct: 168 FGSNVHYQLGTGAKDDRKNLFQLNINQLTNNTELSFTNRIKTSVMTRYHSLLTTSDGRLY 227
Query: 85 SCGHGQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
CG+ GRLG G ++ +++ ++ + + M + S HS+ L+ G + G
Sbjct: 228 VCGNSARGRLGHGATDKPLLTYTEIPL---PETTTIRMLATSDSHSILLVDQGKILTWGW 284
Query: 144 NSFHQLG------LSPPPSHIVSPTPIP-RSSLKSSQPLIGVCCGRFHSVVYSSRE-VYT 195
NS+ QLG S S S P R + + V C HS ++ +Y
Sbjct: 285 NSYRQLGYQSGGKFSEEKSSEGSFGSAPKRVHFFDDKDIKMVACSNVHSCALTTNNMLYI 344
Query: 196 FGIHAGQLGHS 206
+G+ GQ+G S
Sbjct: 345 WGLDLGQMGRS 355
>gi|126328935|ref|XP_001376745.1| PREDICTED: protein RCC2 [Monodelphis domestica]
Length = 439
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +PK + K + A+ ++H++ L
Sbjct: 77 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEV---LSKEVIVSAACGRNHTLAL 133
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL I SP I + + QP+ + CG S++ +
Sbjct: 134 TETGSVFAFGENKMGQLGLGNQTDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 189
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 190 NLYSFGCPEYGQLGHN 205
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P+L++ L + I + H++ +++ G V++ G
Sbjct: 86 KLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTETGSVFAFGEN 145
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ + SP ++ + + + + S+ + G+++ G + Q
Sbjct: 146 KMGQLGLGNQTDAIPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 201
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 202 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVL 261
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 262 DSQKRVFSWGFGGYGRLGHA 281
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 368 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISSDGSVRACGKG 425
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 426 SYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSWGDGDYGKL 485
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVC--CGRFHSVVYSSR-EVYTFGI-HAGQLG 204
G H S T P+ Q + VC G HS S E+YT+G G+LG
Sbjct: 486 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLG 539
Query: 205 H 205
H
Sbjct: 540 H 540
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG+++S G+G
Sbjct: 4087 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNG 4146
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSG-SVFVCGLNSFHQ 148
GRLGLG+ S+ P++++ + V + +H++ + G +V+ G + +
Sbjct: 4147 DYGRLGLGNTSNKKLPERVSALEGHQ---VGQVACGLNHTLAVSADGMTVWAFGDGDYGK 4203
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4204 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFG 4249
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 526 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 583
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 584 GDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 638
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I L +++ ++ + G H + S EVY +G ++ GQ G
Sbjct: 639 LGCGSSEATALRPKLI--EELATTR-VVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG 695
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 696 N---STGPITKPK 705
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 55/208 (26%)
Query: 37 NANY-NLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG-RVWSCGHGQGGRL 94
N +Y LG G+ + +PE + +L+ + QV H++ VS DG VW+ G G G+L
Sbjct: 4145 NGDYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKL 4204
Query: 95 GLGSESSVVSPKKLN-------------------FEKD-------KDKL----------- 117
GLG+ ++ SP+K++ KD +D+L
Sbjct: 4205 GLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNH 4264
Query: 118 ----------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP 165
GV + ++ +H++ L +G V+ G NS QLGL +H+ PT I
Sbjct: 4265 NRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLG-HTNHVREPTLIS 4323
Query: 166 RSSLKSSQPLIGVCCGRFHSVVYSSREV 193
K+ Q + GR HS +++ V
Sbjct: 4324 ALQGKNIQQ---ISAGRCHSAAWTAPPV 4348
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 42 LGTGSQQTRDVPELLDSLKRASIKQV---CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGS 98
LG G+ V ++ +L+ + Q+ C HS+ +++ G V+S G G G+LG G+
Sbjct: 4044 LGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN 4103
Query: 99 ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHI 158
P+++ + ++ V S HS + G +F G + +LGL +
Sbjct: 4104 SDRQRRPRQIEALQGEE---VVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKK 4160
Query: 159 VSPTPIPRSSLKSSQPLIG-VCCGRFHSVVYSS--REVYTFG 197
+ P S+L+ Q +G V CG H++ S+ V+ FG
Sbjct: 4161 L---PERVSALEGHQ--VGQVACGLNHTLAVSADGMTVWAFG 4197
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 8/169 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V++WG + L + VP L S +A +QV + + + +G V +CG G
Sbjct: 3983 DVFLWGAGRHGQLAEAGRNIL-VPTLAPSFSQA--QQVVCGQNCTFVIQANGTVSACGEG 4039
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4040 SYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4099
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFG 197
G P +L+ + ++ + CG HS VV S ++++FG
Sbjct: 4100 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFSFG 4144
>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
[Gallus gallus]
Length = 1212
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N+ LG G + R L+ + IKQ+ + S V++DG+++ G
Sbjct: 112 VYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDN 171
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFH 147
G++GL ++ V P +++ +G ++SIS HS F+ G ++ G
Sbjct: 172 SEGQIGLADKTCVSVPCQVD-------VGKPVSSISCGYYHSAFITGDGELYTFGEPENG 224
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLGH 205
+LGL P + + +P+ L + + V CG H+VV + VYTFG+ GQLGH
Sbjct: 225 KLGLLPEQ---LKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETGVYTFGLGQYGQLGH 280
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y++G+N LG GS+ T P + +LK K + H++ ++ G V++ G
Sbjct: 60 LYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNS 119
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLG-VAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG + ++F ++ K+ +A S + S + G +FV G NS Q+
Sbjct: 120 EGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYT---SAAVTEDGQLFVWGDNSEGQI 176
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLGHSP 207
GL+ + +P + +P+ + CG +HS + E+YTFG G+LG P
Sbjct: 177 GLADK-----TCVSVP-CQVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLP 230
Query: 208 VTVSSASVIEP 218
+ ++ V +P
Sbjct: 231 EQLKNSRVPQP 241
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ +G+++ G G+LGLGS+++V P K L EK K +A
Sbjct: 46 CGDE-HTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTK------LAVC 98
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G NS QLGL
Sbjct: 99 GRNHTLVYTEKGNVYAAGGNSEGQLGL 125
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 105 PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI 164
P K F+ DK S +H+ + +G +++ G N + QLGL + + PT +
Sbjct: 31 PSKFWFKNDK----PVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNT-VRKPTCV 85
Query: 165 PRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
+LK + + V CGR H++VY+ + VY G ++ GQLG
Sbjct: 86 --KALKPEKTKLAV-CGRNHTLVYTEKGNVYAAGGNSEGQLG 124
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 82/182 (45%), Gaps = 15/182 (8%)
Query: 30 EVYIWGTNANYNLGTGSQ---QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
E+Y WG+N LG S Q + P L +L + + HS +S V+
Sbjct: 159 ELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGW 218
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LGL E++ P +L K LGV + + SVFL + G VF CG ++
Sbjct: 219 GRNNCGQLGLNDETNRAYPTQL---KTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAY 275
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG-VCCGRFHS--VVYSSREVYTFGI-HAGQ 202
QLG S +PR ++ I V CG H+ +V S +Y FG+ +GQ
Sbjct: 276 GQLG-----HGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQ 330
Query: 203 LG 204
LG
Sbjct: 331 LG 332
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 13/180 (7%)
Query: 30 EVYIWGTNANYNLG--TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+VY G+N LG +++ +PEL D + I Q+ HS+ +S+ G+V+S G
Sbjct: 56 KVYACGSNDYSQLGHELPTKRPLQIPELQDYV----ITQIACGSRHSMALSEWGQVFSWG 111
Query: 88 HGQGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
+ G+LG S+ +V PK + K + +A S +HS+ L G ++ G N +
Sbjct: 112 DNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGS---NHSLALTCCGELYSWGSNLY 168
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
QLG+S P S TP+ ++L P+ + CG HS + S S V+ +G + GQLG
Sbjct: 169 GQLGVSSPNDLQQSNTPMRLTTLLGI-PVSAIACGGNHSFLISKSSAVFGWGRNNCGQLG 227
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 82 RVWSCGHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
++ G+ G+LGLG E +++P ++ ++ D V + H++FL SG V+
Sbjct: 2 ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDS---AVNQIACGHRHTLFLTASGKVY 58
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
CG N + QLG P P IP + + CG HS+ S +V+++G
Sbjct: 59 ACGSNDYSQLGHELPTKR---PLQIPE---LQDYVITQIACGSRHSMALSEWGQVFSWGD 112
Query: 199 H-AGQLGHSPVTVSSASVIE-PKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGG 256
+ GQLGH+ S +++ PK I+R + + + G+ HS A T G +
Sbjct: 113 NECGQLGHA----SDQDIVKLPK----IVRNLVSKTVVQIACGSNHSL-ALTCCGELYSW 163
Query: 257 G 257
G
Sbjct: 164 G 164
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 12/181 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y WG ++ LG G + + P + +++ Q+ H++F++ G+V++CG
Sbjct: 2 ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACG 61
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+LG + + + L + +D + +A S+ HS+ L G VF G N
Sbjct: 62 SNDYSQLG----HELPTKRPLQIPELQDYVITQIACGSR-HSMALSEWGQVFSWGDNECG 116
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGH 205
QLG IV I R+ + S+ ++ + CG HS+ + E+Y++G + GQLG
Sbjct: 117 QLG-HASDQDIVKLPKIVRNLV--SKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGV 173
Query: 206 S 206
S
Sbjct: 174 S 174
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 117/252 (46%), Gaps = 25/252 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ +++ +V+ WG N LG S Q +P+++ +L ++ Q+ HS+ ++ G
Sbjct: 99 MALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCG 158
Query: 82 RVWSCGHGQGGRLGLGSESSVV---SPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSG 136
++S G G+LG+ S + + +P +L LG+ +++I+ +HS + S
Sbjct: 159 ELYSWGSNLYGQLGVSSPNDLQQSNTPMRLT-----TLLGIPVSAIACGGNHSFLISKSS 213
Query: 137 SVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTF 196
+VF G N+ QLGL+ + P +L++ C F + V+T
Sbjct: 214 AVFGWGRNNCGQLGLNDETNR---AYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTC 270
Query: 197 GIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGP--E 253
G A GQLGH S++ + P+ ++ E + I + G +H+ S G
Sbjct: 271 GAGAYGQLGHG----FSSNEMLPR----MVMELMGSTISQVACGNRHTLALVPSRGRIYG 322
Query: 254 FGGGWTGKKGKR 265
FG G +G+ G R
Sbjct: 323 FGLGSSGQLGTR 334
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ ++K+ V +A Q S+ ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGSTANQPIPRRVT-GCLQNKVVVNIA-CGQMCSMAVVNTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL S PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLG---SSGNQPTPCRIAALQGIR-IQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PV V ++E
Sbjct: 293 NKSNQSYPAPVVVEKDRIVE 312
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LD+L I C+ H V + +G V++
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDALSGKKI--ACLSYGSGPHIVLATTEGEVFT 122
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
GH +LG G+ + + P ++ + V + HS+ L G VF G N+
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQ--VTEVACGSYHSLVLTSDGEVFAWGYNN 180
Query: 146 FHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
Q+G S + PIPR + ++ ++ + CG+ S+ V ++ EVY +G + G
Sbjct: 181 SGQVG-----SGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNG 235
Query: 202 QLG 204
QLG
Sbjct: 236 QLG 238
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 14/148 (9%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDALSGKKI-- 100
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ + V
Sbjct: 101 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVTEV 157
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
CG +HS+V +S EV+ +G ++GQ+G
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 85/184 (46%), Gaps = 25/184 (13%)
Query: 31 VYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
Y WG N LG + T+ +P+L++S+K +K + HS VS G +++ G
Sbjct: 457 AYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMN 516
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLG--VAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGL +P+ + K LG V+M S H V +SG VF CG N
Sbjct: 517 DCGQLGLDHTQHQSTPQLV-----KALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHG 571
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV-YTFGIH-A 200
QLGL P+ +V P + + V CG +H+ +S + Y+FG +
Sbjct: 572 QLGLGHNKQVKVPTQVVLPNEL----------VCFVACGYYHATAITSTGLTYSFGRNDY 621
Query: 201 GQLG 204
GQLG
Sbjct: 622 GQLG 625
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E+Y +G N LG Q + P+L+ +L + V +H V + G V++CG
Sbjct: 509 ELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKN 568
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG V P ++ + V + H+ + +G + G N + QL
Sbjct: 569 DHGQLGLGHNKQVKVPTQVVLPNEL----VCFVACGYYHATAITSTGLTYSFGRNDYGQL 624
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGH 205
G+ S I PI ++ S+ ++ CG +H+++ S S +V+ FG + GQLG+
Sbjct: 625 GIG---SKIHQNIPIAL-TISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQLGN 678
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDK--FHSVFVSDDGRVWSCG 87
V+ G N + G G+ R VP + +L I V H + +S DG V+S G
Sbjct: 3187 VFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWG 3246
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+LGLG+ S ++ E ++K + A++S HS + +G + G+N
Sbjct: 3247 YNDRGQLGLGTTVSKSHTPRV-IESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSG 3305
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGH 205
QLGL H +P + SSQ + V CG +H+V + +VY+FG + GQLG
Sbjct: 3306 QLGLD-HTQHQHTPQLV---ETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGL 3361
Query: 206 S 206
S
Sbjct: 3362 S 3362
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
VS+N ++ +G N + LG Q + P+L+++L + +V +H+V + DDG
Sbjct: 3290 VSNN--GDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGD 3347
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK-----DKLGVAM-ASISQDHSVFLMLSG 136
V+S G + G+LGL + P + D + A+ H+V ++ G
Sbjct: 3348 VYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECG 3407
Query: 137 SVFVCGLNSFHQLGL-SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY--SSREV 193
V G N + QLG+ S I P+P +S + CG +H+++ + R +
Sbjct: 3408 KVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTS-----RVKRASCGCYHTLLLLVNGRPM 3462
Query: 194 YTFGIHAGQLGHSPVTVSSA 213
+ GQLG + ++ SA
Sbjct: 3463 VFGRNNKGQLGVASRSLPSA 3482
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 14/144 (9%)
Query: 79 DDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSV 138
++ ++SCG G L LG + ++ +F K +A + + V LM G+V
Sbjct: 3131 EECEIFSCGQNNYGELCLGHCNPTNKLERASFFSYKSIQSIAGGN---EVLVVLMKDGAV 3187
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F CGLN Q G+ ++ P+PIP S ++ G H + S VY++G
Sbjct: 3188 FTCGLNKSGQCGIGNFDERLIVPSPIPALS-GIPITMVAASNGCEHMLAISHDGAVYSWG 3246
Query: 198 IH-AGQLG--------HSPVTVSS 212
+ GQLG H+P + S
Sbjct: 3247 YNDRGQLGLGTTVSKSHTPRVIES 3270
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVF 131
V + DG V++CG + G+ G+G+ + ++ P + + + M + S +H +
Sbjct: 3179 VVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPI---PALSGIPITMVAASNGCEHMLA 3235
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR 191
+ G+V+ G N QLGL S S TP SL+ + HS V S+
Sbjct: 3236 ISHDGAVYSWGYNDRGQLGLGTTVSK--SHTPRVIESLREKYFITFAAVSYHHSAVVSNN 3293
Query: 192 -EVYTFGIH-AGQLG-------HSPVTVSSAS 214
++ TFG++ +GQLG H+P V + S
Sbjct: 3294 GDLLTFGMNDSGQLGLDHTQHQHTPQLVETLS 3325
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 3/190 (1%)
Query: 16 IRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSV 75
+R++ + F E+Y G N+ LG G R + I+QV
Sbjct: 335 LREQPMYGKCESFGELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILA 394
Query: 76 FVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
++ DG V +CG + G+ G G+ V + ++ AS +H + + +
Sbjct: 395 ILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDT 454
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYT 195
G + G N QLG + + P I S+K + ++V S E+YT
Sbjct: 455 GLAYSWGYNDRGQLGHENVGTKLYLPKLI--ESIKEKKMKSAAVSYHHSALVSVSGELYT 512
Query: 196 FGIH-AGQLG 204
FG++ GQLG
Sbjct: 513 FGMNDCGQLG 522
>gi|358419997|ref|XP_003584389.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Bos
taurus]
Length = 538
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N+++++G+N LG GS+ T + P + +LK +K V + H++ ++ G+V++ G
Sbjct: 99 NKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHTLILTGGGQVYATGG 158
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 159 NNEGQLGLGDTDERSAFHLISFFTSQHK--IKQLSAGSNTSAALTEDGELFMWGDNSEGQ 216
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLGHS 206
+GL ++ +P + +P+ + CG +HS V + E+YTFG +G+LG
Sbjct: 217 IGL-----QNITNICVPH-QVTIGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLP 270
Query: 207 P 207
P
Sbjct: 271 P 271
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+VY G N LG G R L+ + IKQ+ S +++DG ++ G
Sbjct: 152 QVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGD 211
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++GL + +++ P ++ K ++ S HS F+ G ++ G +
Sbjct: 212 NSEGQIGLQNITNICVPHQVTIGKP-----ISWISCGYYHSAFVTTEGELYTFGEPESGK 266
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLGHSP 207
LGL PP +V+ +P+ S+ +I V CG H+VV + + VYTFG+ GQLG
Sbjct: 267 LGL--PPKLLVN-HKVPQLVPGISEKVIQVACGGGHTVVLTEKAVYTFGLGQFGQLGLGT 323
Query: 208 VTVSSASVIEPKVQATI 224
T ++ EPKV ++
Sbjct: 324 FTFETS---EPKVIESV 337
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 50 RDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---K 106
RD+P I C D+ H+ + + +++ G G+LGLGS+++V P K
Sbjct: 79 RDIP----------ISLSCGDE-HTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIK 127
Query: 107 KLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
L EK V + ++H++ L G V+ G N+ QLGL
Sbjct: 128 ALKPEK------VKFVACGRNHTLILTGGGQVYATGGNNEGQLGL 166
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S + +VY WG LG G+ P+ + +L+ IKQ+ H + V+ G V
Sbjct: 89 SEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQ 148
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
S G Q G+LGLG+ + P+K+ FE + V M + +H+ + G ++ G
Sbjct: 149 SWGRNQNGQLGLGTTEDSLLPQKIQAFE----GICVKMIAAGAEHTAAVTEDGDLYGWGW 204
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV-YTFGIHA-G 201
+ LGL V + SL + ++ + CG H++ SS + YT+G G
Sbjct: 205 GRYGNLGLGDRNDRFVP----EKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYG 260
Query: 202 QLGH 205
QLGH
Sbjct: 261 QLGH 264
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 9/181 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG NLG G + R VPE + ++ + + H++ VS G +++ G
Sbjct: 198 DLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWS 257
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G + P K+ KD + S H++ L G ++ G N F Q+
Sbjct: 258 KYGQLGHGDFEDHLFPHKVEALKDSS---TSQISGGWRHTMALTSDGKLYGWGWNKFGQV 314
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGI-HAGQLGHSP 207
G H SP + + Q + V CG H++ Y+ ++ V+ +G +GQLGH
Sbjct: 315 GAGDSVDH-CSPVQV---MFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGE 370
Query: 208 V 208
+
Sbjct: 371 I 371
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 6/150 (4%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK 60
+++++ E+M I R I VSS+ +Y +G + LG G + P +++LK
Sbjct: 224 VSLVEGEKMVLIACGWR-HTITVSSSGI--LYTYGWSKYGQLGHGDFEDHLFPHKVEALK 280
Query: 61 RASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
+S Q+ H++ ++ DG+++ G + G++G G SP ++ F ++ VA
Sbjct: 281 DSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQK---VA 337
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
+ H++ +VF G + QLG
Sbjct: 338 QVACGWRHTLAYTEKKNVFAWGRGTSGQLG 367
>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
leucogenys]
Length = 814
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 16/240 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G + R+ ++ IKQ+ S +++DGR++ G
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL + ++V P+++ K V+ S HS F+ G ++V G +L
Sbjct: 168 SEGQIGLKNVTNVCVPQQVTIGKP-----VSWISCGYYHSAFVTTDGELYVFGEPENGKL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ + + +I V CG H+VV + VYTFG+ GQ G +
Sbjct: 223 GL---PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAVYTFGL--GQFGQLGLG 277
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKGKRLRS 268
+PKV IR+ +I + G H+ + L FG G GK G L +
Sbjct: 278 TFLFETSDPKVIEN-IRDQTISYI---SCGESHTALITDIGLMYTFGDGRHGKLGLGLEN 333
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHK--IKQLSAGSNTSAALTEDGRLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL V+ +P+ + +P+ + CG +HS V + E+Y FG G+LG
Sbjct: 172 IGLKN-----VTNVCVPQ-QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+S+V P K L EK V +A+
Sbjct: 42 CGDE-HSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGL 121
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
N VY +G LG G+ +T D P+++++++ +I + + H+ ++D G +++
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSD-PKVIENIRDQTISYISCGESHTALITDIGLMYTF 319
Query: 87 GHGQGGRLGLGSES 100
G G+ G+LGLG E+
Sbjct: 320 GDGRHGKLGLGLEN 333
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP ++ +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 293 NKSNQSYPTPVTVEKDRIIE 312
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+E+++ GTN LG G Q+ P LDSL I + H V + +G V++ G
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWG 124
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + + P +++ +K + VA S HS+ L G VF G N+
Sbjct: 125 HNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYNNS 181
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQLG
Sbjct: 182 GQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 27/177 (15%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL- 117
I+Q C+ F S ++ + + ++ G G LGLG S + P++L D L
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRL------DSLS 96
Query: 118 GVAMASISQD---HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQP 174
G +AS+S H V G VF G N++ QLG + +H + P I S+ S++
Sbjct: 97 GKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCQI--STNLSNKQ 153
Query: 175 LIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
+I V CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + + L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G++G GS ++ P+++ ++K + +A + S+ ++ +G V+V G N
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMC---SMAVVDAGEVYVWGYNGNG 235
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
QLGL + PTP ++L+ + V CG H++V + +VY +G ++ GQLG
Sbjct: 236 QLGLGSSGNQ---PTPCRVAALQGIH-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGT 291
Query: 206 ---------SPVTVSSASVIE 217
+P++V +IE
Sbjct: 292 GNKSNQSYPTPISVEKDRIIE 312
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
NE+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 65 NEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHIVLATTEGEVFT 122
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 179
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR + ++ ++ + CG+ S+ V + EVY +G +
Sbjct: 180 NSGQVG-----SGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGN 234
Query: 201 GQLG 204
GQLG
Sbjct: 235 GQLG 238
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 10/146 (6%)
Query: 64 IKQVCMDKFHS---VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
I+Q C+ S ++ + + ++ G G LGLG S + P++L+ K ++
Sbjct: 45 IRQACVFGSASNEVLYTTVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLS 104
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCC 180
S H V G VF G N++ QLG + +H + P I S+ S++ +I V C
Sbjct: 105 YG--SGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCYI--STNLSNKQVIEVAC 159
Query: 181 GRFHSVVYSSR-EVYTFGI-HAGQLG 204
G +HS+V +S EV+ +G ++GQ+G
Sbjct: 160 GSYHSLVLTSDGEVFAWGYNNSGQVG 185
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ ++K+ V +A Q S+ ++ +G V+V G N Q
Sbjct: 155 NNSGQVGSGSTANQPIPRRVT-GCLQNKVVVNIAC-GQMCSMAVVDTGEVYVWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP S+L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 213 LGLGSSGNQ---PTPCRVSALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 206 --------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 269 NKSNQSYPTPVVVEKDRIIE 288
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LD L I C+ H V + +G V++
Sbjct: 41 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDCLSGKKI--ACLSYGSGPHVVLATTEGEVFT 98
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 99 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 155
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR + ++ ++ + CG+ S+ V + EVY +G +
Sbjct: 156 NSGQVG-----SGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGN 210
Query: 201 GQLG 204
GQLG
Sbjct: 211 GQLG 214
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 14/148 (9%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 21 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDCLSGKKI-- 76
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 77 ACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 133
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
CG +HS+V +S EV+ +G ++GQ+G
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Ailuropoda melanoleuca]
Length = 1011
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ T + P + +LK +K + H++ ++ G+V++ G
Sbjct: 64 NKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYASGG 123
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG S ++F + K + S + S L G +F+ G NS Q
Sbjct: 124 NNEGQLGLGDTDERNSFHLISFFTSQRK--IKQLSAGSNTSAALTEDGELFMWGDNSEGQ 181
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL ++ +P+ + +P+ + CG +HS V + E+YTFG +G+LG
Sbjct: 182 IGLKN-----ITNVCVPQ-QVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLG 233
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G R+ L+ + IKQ+ S +++DG ++ G
Sbjct: 118 VYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDN 177
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL + ++V P+++ K ++ S HS F+ G ++ G +L
Sbjct: 178 SEGQIGLKNITNVCVPQQVTVGKP-----ISWISCGYYHSAFVTTEGELYTFGEPESGKL 232
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLG 204
GL P ++ +P+S + ++ V CG H+VV + + VYTFG+ GQLG
Sbjct: 233 GL---PKQLLVNHRMPQSVPGIPEKVVQVACGGGHTVVLTEKAVYTFGLGQFGQLG 285
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 32/208 (15%)
Query: 10 RPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM 69
R I L + + E+++WG N+ +G + VP+ + K I +
Sbjct: 150 RKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGK--PISWISC 207
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKL--NFEKDKDKLG----VAMAS 123
+HS FV+ +G +++ G + G+LGL PK+L N + G V +
Sbjct: 208 GYYHSAFVTTEGELYTFGEPESGKLGL--------PKQLLVNHRMPQSVPGIPEKVVQVA 259
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR-----SSLKSSQPLIGV 178
H+V L +V+ GL F QLGL + TP+P+ LK S +
Sbjct: 260 CGGGHTVVLT-EKAVYTFGLGQFGQLGLGT----FLFETPVPKVIEHIKDLKIS----SI 310
Query: 179 CCGRFHSVVYSSREV-YTFGI-HAGQLG 204
CG H+ + + + YTFG G+LG
Sbjct: 311 FCGENHTALITDLGLMYTFGDGRHGKLG 338
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+S+V P K L EK V A+
Sbjct: 52 CGDE-HTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEK------VKFAAC 104
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G V+ G N+ QLGL
Sbjct: 105 GRNHTLVSTEGGKVYASGGNNEGQLGL 131
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY +G LG G+ VP++++ +K I + + H+ ++D G +++ G G
Sbjct: 273 VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDG 332
Query: 90 QGGRLGLGSES 100
+ G+LGLG E+
Sbjct: 333 RHGKLGLGLEN 343
>gi|395529104|ref|XP_003766660.1| PREDICTED: protein RCC2-like [Sarcophilus harrisii]
Length = 483
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +PK + K + A+ ++H++ L
Sbjct: 121 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEV---LSKEVIVSAACGRNHTLAL 177
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL I SP I + + QP+ + CG S++ +
Sbjct: 178 TETGSVFAFGENKMGQLGLGNQTDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 233
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 234 NLYSFGCPEYGQLGHN 249
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P+L++ L + I + H++ +++ G V++ G
Sbjct: 130 KLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTETGSVFAFGEN 189
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ + SP ++ + + + + S+ + G+++ G + Q
Sbjct: 190 KMGQLGLGNQTDAIPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 245
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 246 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVL 305
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 306 DSQKRVFSWGFGGYGRLGHA 325
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP ++ +L + +V +HS+ ++ DG V++ G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 241
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 242 LGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 297
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 298 NKSNQSYPTPVTVEKDRIIE 317
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+E+++ GTN LG G Q+ P LDSL I + H V + +G V++ G
Sbjct: 70 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWG 129
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + + P +++ +K + VA S HS+ L G VF G N+
Sbjct: 130 HNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYNNS 186
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQLG
Sbjct: 187 GQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 243
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 27/177 (15%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL- 117
I+Q C+ F S ++ + + ++ G G LGLG S + P++L D L
Sbjct: 50 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRL------DSLS 101
Query: 118 GVAMASISQD---HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQP 174
G +AS+S H V G VF G N++ QLG + +H + P I S+ S++
Sbjct: 102 GKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCQI--STNLSNKQ 158
Query: 175 LIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
+I V CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 159 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 215
>gi|357520081|ref|XP_003630329.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524351|gb|AET04805.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 230
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 34 WGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGR 93
WG N N LG G+ + VP+ + + + IK V HSV +++DG ++ G G+ G
Sbjct: 92 WGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGN 151
Query: 94 LGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
LGLG + + P+K+N + DK + M S H++ + SG ++ G + + QLG
Sbjct: 152 LGLGDTNDRLIPEKVNIDGDK----IVMVSCGWRHTISISSSGGLYTHGWSKYGQLG 204
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 83/201 (41%), Gaps = 19/201 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR---VWS 85
N V WG + LG G R +P L + I V ++V S G+ W
Sbjct: 31 NVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWG 90
Query: 86 C-GHGQGGRLGLGSESSVVSPKK-LNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
C G Q G LGLG+ P+K L FE + + M + +HSV + G ++ G
Sbjct: 91 CWGRNQNGELGLGTTKDSHVPQKILAFEGIR----IKMVAAGAEHSVAITEDGDLYGWGW 146
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
+ LGL + IP ++ V CG H++ + SS +YT G G
Sbjct: 147 GRYGNLGLGDTNDRL-----IPEKVNIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYG 201
Query: 202 QLGHSPVTVSSASVIEPKVQA 222
QLGH ++ KVQA
Sbjct: 202 QLGHGDF---EDCLVPRKVQA 219
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ + ++Y WG NLG G R +PE ++ + I V H++ +S G
Sbjct: 133 VAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVN-IDGDKIVMVSCGWRHTISISSSGG 191
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
+++ G + G+LG G + P+K+ DK
Sbjct: 192 LYTHGWSKYGQLGHGDFEDCLVPRKVQALSDK 223
>gi|321248822|ref|XP_003191254.1| hypothetical protein CGB_A2210W [Cryptococcus gattii WM276]
gi|317457721|gb|ADV19467.1| hypothetical protein CNBB1820 [Cryptococcus gattii WM276]
Length = 1438
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 45/211 (21%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS---------------IKQVCMDKFH 73
++++WG N N+ LGTG + P+ ++ L +A ++ V M K H
Sbjct: 168 TDLFVWGVNRNFALGTGDHSDKAFPDHINLLTQAQAAGRSDPSQKFSHIGVQDVVMSKLH 227
Query: 74 SVFVSDDGR--VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVF 131
+ ++ + R + CG G GRLG S + + + + ++ QDH++
Sbjct: 228 TGVITSESRGNLSLCGFGANGRLGRSIHSQMALVPMTDLQH-----SIVSIALGQDHTLA 282
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI--------------- 176
L G + G N F QLG +++ P + LI
Sbjct: 283 LTSGGYILSWGHNRFSQLG------YVIEAPEKPAGMGREGDDLIQVSPKRIVGPLKKEF 336
Query: 177 --GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GR S +++ V+T+G +AG LG+
Sbjct: 337 VRGVAAGRMASACWTADAVWTWGTNAGHLGY 367
>gi|388583451|gb|EIM23753.1| hypothetical protein WALSEDRAFT_62422 [Wallemia sebi CBS 633.66]
Length = 1322
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 44/243 (18%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELL-------------DSLKRASIKQVCMDKFHSVF 76
E+Y WG N NY LG R +PE + + + IK+V M K H+
Sbjct: 147 ELYTWGANRNYVLGNTHGNDRQLPERISVERQNQDELIGQEMFRYLDIKKVFMSKNHTGI 206
Query: 77 VSDD--GRVWSCGHGQGGRLGLGSES----SVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
++D+ + CG G GRLG + VSP L F+ VA ++ DHS+
Sbjct: 207 MTDEEYNNIRFCGFGNNGRLGRSVHTQHTFDTVSP-SLPFK-------VADMALGPDHSL 258
Query: 131 FLMLSGSVFVCGLNSFHQLGLS---PPPSHI--------VSPTPIPRSSLKSSQPLIGVC 179
+ G V+ G N + QLG S P H TP + + + G+
Sbjct: 259 LISTEGHVYSFGSNKYQQLGYSVDAPVSQHAKFASTSDPFQTTPKRIVGVLKREVMEGIS 318
Query: 180 CGRFHSVVYSSREVYTFGIHAGQLGH----SPVTVSSASV--IEPKVQATIIREDLPGFI 233
G+ S + + ++T+G + G LG+ +PV + V I+ V +I + G +
Sbjct: 319 AGKTASACWKADSLFTWGTNEGHLGYDQNSTPVQSAPRKVTSIKQNVIDVVISDRSMGVL 378
Query: 234 FES 236
E+
Sbjct: 379 LEN 381
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG N LG G P ++++L I++V H++ +S DG V+S G G
Sbjct: 208 DIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSG 267
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS---GSVFVCGLNSF 146
GGRLG G +P ++ + L + + ++ HS + G++F G N +
Sbjct: 268 YGGRLGQGHLRDRFTPIRIC---GLESLNLTQVACNEFHSAAVCACSKQGALFSFGENDY 324
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
QLG+ P +++ SSL S + V CG FHS + ++ +G + +GQLG
Sbjct: 325 GQLGI--PEDKLLTSYIQCVSSL-SEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLG 381
Query: 205 HSPVTVSS 212
+ T +S
Sbjct: 382 NGNYTSTS 389
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 23 VSSNQFNEVYIWGTN---ANYNLGTGSQQTRDVPE---------LLDSLKRASIKQVCMD 70
V+ N+F+ + + A ++ G +PE + SL I +V
Sbjct: 297 VACNEFHSAAVCACSKQGALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKISRVACG 356
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
FHS +++ G +W G + G+LG G+ +S P L D V + HS
Sbjct: 357 SFHSAALAEHGSLWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSA 416
Query: 131 FLMLSGSVFVCGLNSFHQLG--LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VV 187
F+ G +F CG N++ QLG L+ V+ R + + + V CG H+ VV
Sbjct: 417 FITKKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVV 476
Query: 188 YSSREVYTFGI-HAGQLGH 205
E++T+G G+LGH
Sbjct: 477 TDGGEIFTWGRGKGGRLGH 495
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 11/168 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDS---LKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+++WG N + LG G+ + +P LL++ L+ ++ +V HS F++ GR++ CG
Sbjct: 369 LWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCG 428
Query: 88 HGQGGRLGL----GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
G+LG + V + D V +A H+ + G +F G
Sbjct: 429 DNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVA-CGDSHTAVVTDGGEIFTWGR 487
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR 191
+LG + + PT I + + GV CGR H+ +R
Sbjct: 488 GKGGRLGHGDNLNRHL-PTEIEIG--MEGKHVRGVSCGRAHTACTVTR 532
>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 823
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N + LG GS R P + L R + V +HS+ + DG VW+ G
Sbjct: 639 VWAWGRNNSGQLGDGSLVDRTRPVQVARLNR--VVSVVAGLYHSLALRSDGTVWAWGDNG 696
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ + P ++ GV + HS+ L G+V+ G NS Q+G
Sbjct: 697 SGQLGDGTYFGQMLPVQV-----PGLSGVVAVAAGGRHSLALRADGTVWAWGYNSNGQIG 751
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLI-GVCCGRFHSV-VYSSREVYTFGIH-AGQLGHS 206
S I P+P+ L SSQ ++ GV G HSV V S V T+G + +GQLG++
Sbjct: 752 DGSDASIIYRPSPV--KVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWGQNDSGQLGYA 808
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N+ LG G+ R +D +K+V H++ V D +W+ G
Sbjct: 58 VWTWGANSGGQLGDGTTAYRLASAPVDFSNGMVVKRVAAGGSHALAVLSDKTLWAWGRNG 117
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG+GS +S SP K+ + VAMA+ S +S ++ G V G N++ QLG
Sbjct: 118 DGQLGVGSTTSSFSPVKVPGRTGVEV--VAMAA-STFNSAAVLSDGKVLTWGYNAYGQLG 174
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY-SSREVYTFGIH 199
S +P+ S+L + GV G++H + S V+ +G +
Sbjct: 175 NG---STTDQSSPVEVSALSD---IKGVSVGKYHMLALRSGGTVWAWGFN 218
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 15 LIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHS 74
L+ K + +++ WG N + LG S R P + + +K V FHS
Sbjct: 465 LVAGAKFTLFQKNDGKLWAWGHNFSGQLGDDSTVNRLTPVSVSTASLTDVKNVAAGGFHS 524
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSES--SVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
+ + DG++WS G +LG+ ++ S SP ++ + + HS+ +
Sbjct: 525 LALGSDGKLWSWGSNSLSQLGVSRDTLGSRASPALVSGVSGV-----VAVAAGETHSLVV 579
Query: 133 MLSGSVFVCGLNSFHQL--GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY-S 189
+ +G V G N + Q+ G SP P+ S +P ++L S ++GV G+ HS+ S
Sbjct: 580 LSNGKVSAWGYNGYGQIGDGCSPVPTFYCS-SPTEPTNLFS---ILGVAAGQNHSLALRS 635
Query: 190 SREVYTFG-IHAGQLG 204
V+ +G ++GQLG
Sbjct: 636 DGTVWAWGRNNSGQLG 651
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG GS R P + L + +V +FH++ + DG VW+ G
Sbjct: 264 VWAWGQNNQGQLGIGSFTDRPSPVQVPRLT--GVVEVAAGQFHALALRLDGTVWAWGFNG 321
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ S SP ++ GV + HSV ++ G V+ G NS QLG
Sbjct: 322 SGQLGDGTTLSRSSPVQV-----PGLTGVVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLG 376
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGR 182
S P P P Q L+ CG
Sbjct: 377 ---DGSQDALPHPTP------GQALLPFVCGN 399
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 15/198 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V WG NA LG GS + P + +L + IK V + K+H + + G VW+ G
Sbjct: 161 KVLTWGYNAYGQLGNGSTTDQSSPVEVSAL--SDIKGVSVGKYHMLALRSGGTVWAWGF- 217
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKL-GVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
S + N + L GVA S HS+ L G+V+ G N+ Q
Sbjct: 218 ---NGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDGTVWAWGQNNQGQ 274
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLGHS 206
LG+ S P+P+ L ++ V G+FH++ V+ +G + +GQLG
Sbjct: 275 LGIG---SFTDRPSPVQVPRLTG---VVEVAAGQFHALALRLDGTVWAWGFNGSGQLGDG 328
Query: 207 PVTVSSASVIEPKVQATI 224
S+ V P + +
Sbjct: 329 TTLSRSSPVQVPGLTGVV 346
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 61 RASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
R + + +++ DDG VW+ G GG+LG G+ + ++ ++F + + V
Sbjct: 36 RLETPRAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLASAPVDF---SNGMVVK 92
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCC 180
+ H++ ++ +++ G N QLG+ S SP +P ++ ++ +
Sbjct: 93 RVAAGGSHALAVLSDKTLWAWGRNGDGQLGVGSTTSSF-SPVKVPG---RTGVEVVAMAA 148
Query: 181 GRFHS-VVYSSREVYTFGIHA-GQLGH-------SPVTVSSASVIE 217
F+S V S +V T+G +A GQLG+ SPV VS+ S I+
Sbjct: 149 STFNSAAVLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIK 194
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 21 IDVSSNQFNE--------VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF 72
++V++ QF+ V+ WG N + LG G+ +R P + L + V
Sbjct: 296 VEVAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLSRSSPVQVPGLT--GVVSVAAGDG 353
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP 105
HSV V DGRV++ G G+LG GS+ ++ P
Sbjct: 354 HSVAVLSDGRVYTWGRNSAGQLGDGSQDALPHP 386
>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1379
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 22/199 (11%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD 80
+ V+ Q V+ WG NA LG G+ R P + L A + V +H V V D
Sbjct: 482 LTVAVRQDGTVWAWGDNARGQLGDGTTTRRLTPVQVQGL--AGVTAVAASDYHLVAVRQD 539
Query: 81 GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
G VW+ G G G+LG G+ +P ++ + GV + +H+V L G+V+
Sbjct: 540 GTVWAWGVGFWGQLGDGTGMDRSTPVQV-----QGLTGVTAIAAGSNHTVALRQDGTVWA 594
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH 199
G N++ QLG H+ +P +P + + + G H+V + V+T+G +
Sbjct: 595 WGFNNYGQLGDGTTAGHL-TPVQVPGVT-----GAVAIAAGGSHTVALLQDGTVWTWGYN 648
Query: 200 A-GQLG-------HSPVTV 210
GQLG HSPV V
Sbjct: 649 IWGQLGDGTTTHRHSPVQV 667
Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 21/193 (10%)
Query: 24 SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
++ Q ++ WG N+ LG G R +P + L A+ + H+V V DG V
Sbjct: 785 AAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTV 844
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA-----MASISQDHSVFLMLSGSV 138
W+ G G+LG G+ + ++P ++ + D +A MA+ QD G++
Sbjct: 845 WAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQD--------GTL 896
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFH-SVVYSSREVYTFG 197
+ GLNS+ QLG P S+ + P + + + + G +H + ++T+G
Sbjct: 897 WTWGLNSYGQLG-GGPLSYRLLPVQV-----QGLMDVTAMAAGGYHMAAAGQDGTLWTWG 950
Query: 198 IHA-GQLGHSPVT 209
+++ GQLG P++
Sbjct: 951 LNSYGQLGGGPLS 963
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 13/194 (6%)
Query: 24 SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
++ Q ++ WG N+ LG G P + + + H++ V DG V
Sbjct: 989 AAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTV 1048
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
WS G G+LG G+ + ++P ++ + GV S H+V L G+V+ G
Sbjct: 1049 WSWGGNAYGQLGDGTTAQSLTPVQV-----QGLTGVTAISAGDAHTVALRRDGTVWAWGR 1103
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
NS+ QLG +H +P + + +I + G H+V + V+ +G ++ G
Sbjct: 1104 NSWGQLG-DGTTTHRATPVQV-----QGLTGVIAIAAGSLHTVALRQDGTVWAWGRNSWG 1157
Query: 202 QLGHSPVTVSSASV 215
QLG T + V
Sbjct: 1158 QLGDGTTTHRATPV 1171
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 78/190 (41%), Gaps = 21/190 (11%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N+ LG G+ R P + L + + H+V + DG VW+ G
Sbjct: 1098 VWAWGRNSWGQLGDGTTTHRATPVQVQGL--TGVIAIAAGSLHTVALRQDGTVWAWGRNS 1155
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ + +P ++ + GV + H+V L G+V+ G N QLG
Sbjct: 1156 WGQLGDGTTTHRATPVQV-----QGLTGVIAIAAGSLHTVALRQDGTVWAWGFNDLGQLG 1210
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGV---CCGRFHS-VVYSSREVYTFGIHA-GQLGH 205
T R + Q L GV G FH+ V +T+G + GQLG
Sbjct: 1211 ---------DGTTTRRLTPAQVQGLTGVTTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGD 1261
Query: 206 SPVTVSSASV 215
T + V
Sbjct: 1262 GTFTDRATPV 1271
Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ Q V+ WG N LG G+ R P + L + + FH+ V DG
Sbjct: 1190 VALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGL--TGVTTIAAGYFHTAAVRQDGT 1247
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
W+ G G+LG G+ + +P ++ + GV+ + H+V + G+V+ G
Sbjct: 1248 AWTWGFNLWGQLGDGTFTDRATPVQV-----QGLTGVSALAAGYAHTVVVGEDGTVWAWG 1302
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS 189
NS QLG S TP+ +L + + GRFH+V S
Sbjct: 1303 NNSGTQLGNG---SSTDRSTPVQVEALTGA---FSLAAGRFHTVAMS 1343
Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 56/207 (27%), Positives = 86/207 (41%), Gaps = 21/207 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+S Q V+ WG N LG G+ R P + L+ I + +V V DG
Sbjct: 434 VASKQDGTVWAWGDNKRSQLGEGAVSQRHTPGEVQGLE--GITAIAASNLLTVAVRQDGT 491
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
VW+ G G+LG G+ + ++P ++ + GV + S H V + G+V+ G
Sbjct: 492 VWAWGDNARGQLGDGTTTRRLTPVQV-----QGLAGVTAVAASDYHLVAVRQDGTVWAWG 546
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV---CCGRFHSV-VYSSREVYTFGI 198
+ + QLG T + RS+ Q L GV G H+V + V+ +G
Sbjct: 547 VGFWGQLG---------DGTGMDRSTPVQVQGLTGVTAIAAGSNHTVALRQDGTVWAWGF 597
Query: 199 HA-GQLGHSPVTVSSASVIEPKVQATI 224
+ GQLG V P V +
Sbjct: 598 NNYGQLGDGTTAGHLTPVQVPGVTGAV 624
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ Q V+ WG+N + LG G+ P + + + +H DG
Sbjct: 836 VAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGT 895
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL---GVAMASISQDHSVFLMLSGSVF 139
+W+ G G+LG G S + P ++ D + G MA+ QD G+++
Sbjct: 896 LWTWGLNSYGQLGGGPLSYRLLPVQVQGLMDVTAMAAGGYHMAAAGQD--------GTLW 947
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFH-SVVYSSREVYTFGI 198
GLNS+ QLG P ++ P+ L S + + G +H + ++T+G+
Sbjct: 948 TWGLNSYGQLGGGPLSYRLL---PVQVQGLMS---VTAMAAGGYHMAAAGQDGTLWTWGL 1001
Query: 199 HA-GQLGHSPVTVSSASVIEPKVQA 222
++ GQLG P++ S + ++ +VQ
Sbjct: 1002 NSYGQLGGGPLS-QSLTPVQVQVQG 1025
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+++Q V+ WG N++ LG G+ R P + L + V + HS + G
Sbjct: 134 VAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGL--TGVTAVAAGRNHSAALGQGGT 191
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
VW+ G G+LG G+ + ++P ++ + GV S + +V L G+V+ G
Sbjct: 192 VWTWGDNLVGQLGDGTSTQRLTPVQV-----QGLTGVIAISANDSETVALRQDGTVWAWG 246
Query: 143 LNSFHQLG 150
NS QLG
Sbjct: 247 NNSSGQLG 254
Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
Q V+ WG N + LG G+ R P + + A + +H+V S DG VW+
Sbjct: 90 QDGTVWAWGNNDDGQLGDGTTTRRFSPVQVMTGATA----IAAGIYHTVAASQDGTVWTW 145
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LG G+ SP ++ + GV + ++HS L G+V+ G N
Sbjct: 146 GRNSSGQLGDGTSIQRFSPVQV-----QGLTGVTAVAAGRNHSAALGQGGTVWTWGDNLV 200
Query: 147 HQLG 150
QLG
Sbjct: 201 GQLG 204
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 21/198 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ Q V+ WG N+ LG G+ R P + L + + H+V + DG
Sbjct: 1140 VALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGL--TGVIAIAAGSLHTVALRQDGT 1197
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
VW+ G G+LG G+ + ++P ++ + GV + H+ + G+ + G
Sbjct: 1198 VWAWGFNDLGQLGDGTTTRRLTPAQV-----QGLTGVTTIAAGYFHTAAVRQDGTAWTWG 1252
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV---CCGRFHSVVYSSR-EVYTFGI 198
N + QLG T R++ Q L GV G H+VV V+ +G
Sbjct: 1253 FNLWGQLG---------DGTFTDRATPVQVQGLTGVSALAAGYAHTVVVGEDGTVWAWGN 1303
Query: 199 HAG-QLGHSPVTVSSASV 215
++G QLG+ T S V
Sbjct: 1304 NSGTQLGNGSSTDRSTPV 1321
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ Q V+ WG N++ LG G+ R P + L A+ + +V + D
Sbjct: 684 VAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDAT--AILTSSSQTVAMRQDRT 741
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL---GVAMASISQDHSVFLMLSGSVF 139
+W+ G G+LG G+ + ++P ++ D + G MA+ QD G+++
Sbjct: 742 LWAWGDNHWGQLGDGTTTRRLTPVQVQGLMDVTAMAAGGYHMAAAGQD--------GTLW 793
Query: 140 VCGLNSFHQLGLSP 153
GLNS+ QLG P
Sbjct: 794 TWGLNSYGQLGGGP 807
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
Q V+ WG N LG G+ R P + L A + + + H+V V DG VW+
Sbjct: 638 QDGTVWTWGYNIWGQLGDGTTTHRHSPVQVQGL--ADVIAIATNNGHTVAVRQDGTVWTW 695
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LG G+ + ++P +++ D + + S SQ +V + +++ G N +
Sbjct: 696 GLNSSGQLGDGTTTQRLTPVQVHGLTDATAI---LTSSSQ--TVAMRQDRTLWAWGDNHW 750
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFH-SVVYSSREVYTFGIHA-GQLG 204
QLG + TP+ L + + G +H + ++T+G+++ GQLG
Sbjct: 751 GQLGDGTTTRRL---TPVQVQGLMD---VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLG 804
Query: 205 HSPVT 209
P++
Sbjct: 805 GGPLS 809
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 13/194 (6%)
Query: 24 SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
++ Q ++ WG N+ LG G R +P + L S+ + +H DG +
Sbjct: 939 AAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGL--MSVTAMAAGGYHMAAAGQDGTL 996
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
W+ G G+LG G S ++P ++ + GVA + H++ + G+V+ G
Sbjct: 997 WTWGLNSYGQLGGGPLSQSLTPVQVQVQ---GLTGVAAIAAGFSHTLAVRQDGTVWSWGG 1053
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
N++ QLG S TP+ L + + G H+V + V+ +G ++ G
Sbjct: 1054 NAYGQLGDGTTAQ---SLTPVQVQGLTG---VTAISAGDAHTVALRRDGTVWAWGRNSWG 1107
Query: 202 QLGHSPVTVSSASV 215
QLG T + V
Sbjct: 1108 QLGDGTTTHRATPV 1121
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ Q V+ WG N++ LG G+ R P + L + + +V + DG
Sbjct: 234 VALRQDGTVWAWGNNSSGQLGDGTTTVRFTP--VQVLGLTGVTAIAAGGGFAVALRQDGT 291
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
+W+ G G+LG G+ P E+ + GV + S H+V L G+++ G
Sbjct: 292 LWAWGSNSRGQLGNGTTFGSYRP-----EQVQGLTGVTAIAASGIHTVALRQDGTLWAWG 346
Query: 143 LNSFHQLG 150
NS QLG
Sbjct: 347 NNSSGQLG 354
Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ Q ++ WG+N+ LG G+ PE + L + + H+V + DG
Sbjct: 284 VALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQGL--TGVTAIAASGIHTVALRQDGT 341
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
+W+ G+ G+LG G+ + +P ++ + GV + ++V G+V+ G
Sbjct: 342 LWAWGNNSSGQLGDGTTTVRFTPVQV-----QGLTGVTAIAAGYLYTVASKQDGTVWAWG 396
Query: 143 LNSFHQLG 150
N + QLG
Sbjct: 397 DNEWGQLG 404
Score = 43.9 bits (102), Expect = 0.076, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ Q ++ WG N++ LG G+ R P + L + + ++V DG
Sbjct: 334 VALRQDGTLWAWGNNSSGQLGDGTTTVRFTPVQVQGL--TGVTAIAAGYLYTVASKQDGT 391
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
VW+ G + G+LG G+ + ++P ++ + GV + ++V G+V+ G
Sbjct: 392 VWAWGDNEWGQLGDGTTTRRLTPVQV-----QGLTGVTAIAAGYLYTVASKQDGTVWAWG 446
Query: 143 LNSFHQLG 150
N QLG
Sbjct: 447 DNKRSQLG 454
Score = 42.4 bits (98), Expect = 0.23, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
Q + WG N LG G+ R P + L + + H+V V +DG VW+
Sbjct: 1244 QDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGL--TGVSALAAGYAHTVVVGEDGTVWAW 1301
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G+ G +LG GS + +P ++ + G + + H+V + G+ + G N+
Sbjct: 1302 GNNSGTQLGNGSSTDRSTPVQV-----EALTGAFSLAAGRFHTVAMSPDGAGWGWGRNNL 1356
Query: 147 HQLGLSPPPSHIVSPTPI 164
Q+G PTP+
Sbjct: 1357 GQVGDGTTADR---PTPV 1371
Score = 42.0 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 7/124 (5%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
Q V+ WG N LG G+ R P + L + + + +V + DG VW+
Sbjct: 188 QGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGL--TGVIAISANDSETVALRQDGTVWAW 245
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G+ G+LG G+ + +P ++ GV + +V L G+++ G NS
Sbjct: 246 GNNSSGQLGDGTTTVRFTPVQV-----LGLTGVTAIAAGGGFAVALRQDGTLWAWGSNSR 300
Query: 147 HQLG 150
QLG
Sbjct: 301 GQLG 304
Score = 42.0 bits (97), Expect = 0.30, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 7/128 (5%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+S Q V+ WG N LG G+ R P + L + + ++V DG
Sbjct: 384 VASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQGL--TGVTAIAAGYLYTVASKQDGT 441
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
VW+ G + +LG G+ S +P ++ + G+ + S +V + G+V+ G
Sbjct: 442 VWAWGDNKRSQLGEGAVSQRHTPGEVQGLE-----GITAIAASNLLTVAVRQDGTVWAWG 496
Query: 143 LNSFHQLG 150
N+ QLG
Sbjct: 497 DNARGQLG 504
Score = 41.6 bits (96), Expect = 0.35, Method: Composition-based stats.
Identities = 44/142 (30%), Positives = 60/142 (42%), Gaps = 21/142 (14%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H++ V DG VW+ G+ G+LG G+ + SP ++ G + H+V
Sbjct: 84 HTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQV-------MTGATAIAAGIYHTVAA 136
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG---VCCGRFHSVVY- 188
G+V+ G NS QLG T I R S Q L G V GR HS
Sbjct: 137 SQDGTVWTWGRNSSGQLG---------DGTSIQRFSPVQVQGLTGVTAVAAGRNHSAALG 187
Query: 189 SSREVYTFGIH-AGQLGHSPVT 209
V+T+G + GQLG T
Sbjct: 188 QGGTVWTWGDNLVGQLGDGTST 209
>gi|361123899|gb|EHK96040.1| putative BTB/POZ domain-containing protein 1 [Glarea lozoyensis
74030]
Length = 1523
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 91/228 (39%), Gaps = 54/228 (23%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPE-----------------LLDSLKRAS-------- 63
+EV+ WG++ NYNLG G + R PE L+S+K
Sbjct: 236 DEVFAWGSSKNYNLGFGDEDNRQYPEKVTLKRPDHLLFRFYREYLESIKDTDEALYSLSS 295
Query: 64 --------------------IKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESS 101
I V + K HS ++ D ++ CG G GGRLG G E +
Sbjct: 296 RSNPKLVSDLPTLVANRPIVIHDVTLSKLHSAILTTDPESNLFMCGFGPGGRLGTGDEIT 355
Query: 102 VVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSP 161
S + E + ++ +H++ + G +F G + LG S P + +
Sbjct: 356 RFS--YVCIENGLAGRKIVQVALGTNHTLAIDSQGEIFSWGQSGQGVLGYSLPRTGLKDD 413
Query: 162 TPIPRSSLKSSQPL-----IGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
PI + + PL IGV HSV +S ++T+G + GQLG
Sbjct: 414 DPISSTPRQIFGPLKREMIIGVAASAIHSVACTSTSLFTWGRNEGQLG 461
>gi|290988285|ref|XP_002676852.1| predicted protein [Naegleria gruberi]
gi|284090456|gb|EFC44108.1| predicted protein [Naegleria gruberi]
Length = 339
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H+V V+D V++ G Q G+LG+GS +PKK+ F+ D + S H+VFL
Sbjct: 172 HTVIVTDQCNVYAFGRNQNGQLGIGSFEDSPTPKKVVFDVVDDY--IVNVSCGDRHTVFL 229
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE 192
G V+VCG N +QLGL + P+ + S + VC R ++ +
Sbjct: 230 THKGRVYVCGANFNYQLGLGHNTNM---SKPVLVDQMISRKIRRAVCGARHTVLITGKGK 286
Query: 193 VYTFGIHA-GQLGH 205
+YT G+ + GQLGH
Sbjct: 287 IYTAGLGSFGQLGH 300
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPE--LLDSLKRASIKQVCMDKFHSVFVSDD 80
+ ++Q N VY +G N N LG GS + P+ + D + + C D+ H+VF++
Sbjct: 175 IVTDQCN-VYAFGRNQNGQLGIGSFEDSPTPKKVVFDVVDDYIVNVSCGDR-HTVFLTHK 232
Query: 81 GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
GRV+ CG +LGLG +++ P ++ + + A H+V + G ++
Sbjct: 233 GRVYVCGANFNYQLGLGHNTNMSKPVLVDQMISRK---IRRAVCGARHTVLITGKGKIYT 289
Query: 141 CGLNSFHQLG 150
GL SF QLG
Sbjct: 290 AGLGSFGQLG 299
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY+ G N NY LG G P L+D + I++ H+V ++ G++++ G G
Sbjct: 235 VYVCGANFNYQLGLGHNTNMSKPVLVDQMISRKIRRAVCGARHTVLITGKGKIYTAGLGS 294
Query: 91 GGRLGLG 97
G+LG G
Sbjct: 295 FGQLGHG 301
>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
[Strongylocentrotus purpuratus]
Length = 536
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 25/255 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPE-LLDSLKRASIKQVCMDKFHSVFVSDDG 81
V++ + E+Y WG N LG G+ +P + +L I Q+ HS+ ++D G
Sbjct: 92 VAATENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRG 151
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG---VAMASISQDHSVFLMLSGSV 138
V++ G+ G++G G+ +++ +P+K+ LG V + Q S+ ++ SG V
Sbjct: 152 EVFAWGYNNCGQVGSGATANISTPRKV-----VSVLGGKRVVSIACGQTSSLAVVDSGEV 206
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
+ G N QLGL +++ P+P SSL + + CG HS+ S +YT+G
Sbjct: 207 YGWGYNGNGQLGLG---NNVNQPSPCKVSSL-NGLIISQAACGYAHSMALSDEGNIYTWG 262
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGG 256
++ GQLG T + A++ A I E + FI + H A T G +
Sbjct: 263 ANSYGQLG----TGNKANL----CGAAKIGESIGRFIDIAATHYAHISAAMTQTGKVY-- 312
Query: 257 GWTGKKGKRLRSKLE 271
W +G+ + S +E
Sbjct: 313 MWGQCRGQSITSPME 327
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+ +G N N LG G + P ++ L + + + H V +++G ++S G
Sbjct: 45 DEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGPHVVAATENGEIYSWG 104
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
H +LG G+ + + P ++ K ++ + HS+ L G VF G N+
Sbjct: 105 HNGYCQLGNGTTNQGLLPHRITGNLGSCK--ISQIACGSHHSLVLTDRGEVFAWGYNNCG 162
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGH 205
Q+G S ++I +P + S+ + ++ + CG+ S+ V S EVY +G + GQLG
Sbjct: 163 QVG-SGATANISTPRKVV--SVLGGKRVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGL 219
Query: 206 -------SPVTVSS 212
SP VSS
Sbjct: 220 GNNVNQPSPCKVSS 233
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 18/178 (10%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
L D L + +K C+ +++V+ D V++ G+ LGLG S ++P+K+ E
Sbjct: 16 LADDLVVSGVKLACVFGSAGNEAIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKI--E 73
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS--SL 169
K A+A S H V +G ++ G N + QLG ++ P I + S
Sbjct: 74 GLCKKGMFALAFGSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQGLL-PHRITGNLGSC 132
Query: 170 KSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHSPVTVSSASVIEPKVQATII 225
K SQ + CG HS+V + R EV+ +G + GQ+G ++A++ P+ +++
Sbjct: 133 KISQ----IACGSHHSLVLTDRGEVFAWGYNNCGQVGSG----ATANISTPRKVVSVL 182
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 95/182 (52%), Gaps = 11/182 (6%)
Query: 31 VYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+Y WG + LG + + +P ++ L + I+Q+ H + + DDG++++ G
Sbjct: 105 LYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQN 164
Query: 90 QGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ S SP+K+ K + + +A + HS L LSG+VF G NS Q
Sbjct: 165 THGQLGLGNGFISQSSPQKV---KSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQ 221
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL+ V TP L++ + ++ + CG H+ + + + ++TFG +GQLGH
Sbjct: 222 LGLNDEQ---VKETPCHVKPLRTHK-VVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHD 277
Query: 207 PV 208
+
Sbjct: 278 SL 279
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 24/247 (9%)
Query: 34 WGTNANYNLGTGSQQTRDVPE-LLDSLKRAS-IKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG +A LG G V E + A+ +K+V H++F+ +DG+V+SCG
Sbjct: 4 WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGE 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+LG E + +P E+ + + Q HS+ L L G+++ G + QLG
Sbjct: 64 GQLGHSHEGTHPAPVATLAEEH-----IKHIACGQSHSLALSLQGNLYSWGAGNDGQLGH 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLI-GVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPV 208
+ + + IPR K SQ I + CG H + +++T+G + GQLG
Sbjct: 119 ATVEHY----SRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNG 174
Query: 209 TVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRS 268
+S +S KV++ E +P + + G HSF S G F GW +L
Sbjct: 175 FISQSS--PQKVKSL---EGIP--LAQVTAGGSHSFALSLS-GAVF--GWGKNSAGQLGL 224
Query: 269 KLEAVKQ 275
E VK+
Sbjct: 225 NDEQVKE 231
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N+ LG +Q ++ P + L+ + + + H+ ++ G +++ G G
Sbjct: 211 VFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSV-FLMLSGSVFVCGLNSFH 147
G+LG S + ++P+++ + +G ++ I+ + H++ F+ SG+++ G
Sbjct: 271 SGQLGHDSLHNEINPRRV-----LELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLG 325
Query: 148 QLG 150
QLG
Sbjct: 326 QLG 328
>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
garnettii]
Length = 816
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 19 RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFV 77
R + S + VY G N LG G RD L+ + IKQ+ S +
Sbjct: 96 RTHTIISTEGGNVYATGGNNEGQLGLGDTDERDTFHLISFFTSQHKIKQLSAGSNTSAAL 155
Query: 78 SDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS 137
++DG+++ G G++GL ++V P ++ K ++ S HS F+ + G
Sbjct: 156 TEDGQLFMWGDNSEGQIGLKDVTNVCVPHQVTIGKP-----ISWISCGYYHSAFVTIDGE 210
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQP--LIGVCCGRFHSVVYSSREVYT 195
++ G + +LGL PS +++ IP+ L SS P +I V CG H++V + VY
Sbjct: 211 LYTFGESESGKLGL---PSQLLTNHRIPQ--LVSSIPDKVIQVACGGGHTLVLTEESVYA 265
Query: 196 FGIHAGQLGHSPVTVSSASVIEPKV 220
FG+ GQ G + EPKV
Sbjct: 266 FGL--GQFGQLGLGTFIFETSEPKV 288
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ + P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHTIISTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTDERDTFHLISFFTSQHK--IKQLSAGSNTSAALTEDGQLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL V+ +P + +P+ + CG +HS V E+YTFG +G+LG
Sbjct: 172 IGLKD-----VTNVCVPH-QVTIGKPISWISCGYYHSAFVTIDGELYTFGESESGKLG 223
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++++WG N+ +G VP + K I + +HS FV+ DG +++ G
Sbjct: 160 QLFMWGDNSEGQIGLKDVTNVCVPHQVTIGK--PISWISCGYYHSAFVTIDGELYTFGES 217
Query: 90 QGGRLGLGSE--SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+LGL S+ ++ P+ ++ DK V + H++ L SV+ GL F
Sbjct: 218 ESGKLGLPSQLLTNHRIPQLVSSIPDK----VIQVACGGGHTLVLT-EESVYAFGLGQFG 272
Query: 148 QLGLSPPPSHIVSPTPIPRS-SLKSSQPLIGVCCGRFHS-VVYSSREVYTFG 197
QLGL + T P+ + +I + CG H+ ++ + +YTFG
Sbjct: 273 QLGL----GTFIFETSEPKVLEYVKGEKIISISCGENHTAMITDTGGIYTFG 320
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+++V P K L EK V A+
Sbjct: 42 CGDE-HSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKALKPEK------VKFAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
+ H++ G+V+ G N+ QLGL
Sbjct: 95 GRTHTIISTEGGNVYATGGNNEGQLGL 121
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 31 VYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY +G LG G+ +T + P++L+ +K I + + H+ ++D G +++ G
Sbjct: 263 VYAFGLGQFGQLGLGTFIFETSE-PKVLEYVKGEKIISISCGENHTAMITDTGGIYTFGD 321
Query: 89 GQGGRLGLGSES 100
G+ G+LGLG E+
Sbjct: 322 GRHGKLGLGLEN 333
>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
Length = 432
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 13/179 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+Y WG A+ G+G + +P L+ L++ + V + H+ V++ G VW+ G+G
Sbjct: 164 LYCWGRAAS--AGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNG 221
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G LG G ++S PKK+ +K V + +D ++F+ SG ++ CG + + QL
Sbjct: 222 YEGELGHGEKNSQYQPKKVQSLTEK----VVDVACGRDFTIFVCESG-LYSCGADDYGQL 276
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE--VYTFGI-HAGQLGH 205
GL TP S S ++ + G +H V R+ VYT+G+ GQLGH
Sbjct: 277 GLGRSHGERFVQTPRSLSGTGLSD-VVAISAGDYH-VCALGRDGLVYTWGLGREGQLGH 333
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 99/236 (41%), Gaps = 23/236 (9%)
Query: 13 DHLIRDRKIDVSSNQFNE---VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM 69
+ L+ +RK + + +G N LG G ++ D P +++L I V
Sbjct: 39 EQLLEERKNRMKKAALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAA 98
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHS 129
+ +S DG V++ G G+ G+LG +S+ P+ + K K+ + SI +H
Sbjct: 99 GDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKN---IVKVSIGGNHM 155
Query: 130 VFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS 189
+ G ++ G + S H+ P I K + +I V CGR H+ +
Sbjct: 156 AAIDKDGHLYCWGRAASAG---SGGTEHVFIPRLIKGDLEK--EKVISVSCGRSHTAAVT 210
Query: 190 SR-EVYTFGI-HAGQLGHS-------PVTVSSASVIEPKVQATIIREDLPGFIFES 236
+ EV+T+G + G+LGH P V S + KV D F+ ES
Sbjct: 211 EKGEVWTWGNGYEGELGHGEKNSQYQPKKVQS---LTEKVVDVACGRDFTIFVCES 263
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG LG G + + + +D+L+ I QV H+ V+ DG +++ G G+
Sbjct: 320 VYTWGLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGR 379
Query: 91 GGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAM-ASISQDHSVFL 132
G+LG G E S+ S + + G + ++ DHS L
Sbjct: 380 DGQLGRGGELESIASYRTSPVQVTSLPAGAVLYVTLGSDHSAVL 423
>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
Length = 531
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 18 DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVF 76
+ I ++ N +EV+++G N + LGTG Q+ VP+ L++L I + H V
Sbjct: 32 NEAIYITHN--DEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVL 89
Query: 77 VSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSG 136
++DG V++ GH +LG G+ + ++P ++ K V + HS+ L G
Sbjct: 90 CTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKK--VVEVACGSHHSMALSFDG 147
Query: 137 SVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYT 195
++ G N+ Q+G + PTP S+ + ++G+ CG+ S+ V S+ EVY
Sbjct: 148 DLYAWGYNNCGQVGSGSTANQ---PTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYG 204
Query: 196 FGIHA-GQLG 204
+G + GQLG
Sbjct: 205 WGYNGNGQLG 214
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L I Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDH-SVFLMLSGSVFVCG 142
G+LG G++S+ +SP ++ EK++ V +A+ H S SG V++ G
Sbjct: 261 TYGQLGTGNKSNQLSPVQIMMEKERV---VEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 9/138 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELL-DSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++Y WG N +G+GS + P + + L+ + + + S+ V +G V+ G+
Sbjct: 148 DLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSF 146
G+LGLG+ + ++P ++ GV + I+ H++ L G ++ G N++
Sbjct: 208 NGNGQLGLGNNGNQLTPCRV-----AALHGVCILQIACGYAHTLALTDEGLLYAWGANTY 262
Query: 147 HQLGLSPPPSHIVSPTPI 164
QLG + S+ +SP I
Sbjct: 263 GQLG-TGNKSNQLSPVQI 279
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 10/155 (6%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++++ + V+ G LG G S + PKKL E
Sbjct: 12 LLSPQEVASIRKACVFGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKL--E 69
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
K +++ S H V G V+ G N + QLG I TP+ +
Sbjct: 70 ALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGI---TPVQVCTNLL 126
Query: 172 SQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
+ ++ V CG HS+ S ++Y +G + GQ+G
Sbjct: 127 IKKVVEVACGSHHSMALSFDGDLYAWGYNNCGQVG 161
>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
aries]
Length = 1137
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N+++++G+N LG GS+ T + P + +LK +K V + H++ ++ G+V++ G
Sbjct: 80 NKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHTLVLTGGGKVYATGG 139
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 140 NNEGQLGLGDTDERSAFHLISFFTSQHK--IKQLSAGSNTSAALTEDGELFMWGDNSEGQ 197
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLGHS 206
+GL ++ +P + +P+ + CG +HS V + E+YTFG +G+LG
Sbjct: 198 IGL-----QNITNMCVPH-QVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLP 251
Query: 207 P 207
P
Sbjct: 252 P 252
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 105/235 (44%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G R L+ + IKQ+ S +++DG ++ G
Sbjct: 134 VYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGDN 193
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL + +++ P ++ K ++ S HS F+ G ++ G +L
Sbjct: 194 SEGQIGLQNITNMCVPHQVTVGK-----PISWISCGYYHSAFVTTEGELYTFGEPESGKL 248
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLGHSPV 208
GL PP +V+ +P+ S+ +I V CG H+VV + + VYTFG+ GQLG
Sbjct: 249 GL--PPKLLVN-HKVPQLVPGISEKVIQVACGGGHTVVLTEKAVYTFGLGQFGQLGLGTF 305
Query: 209 TVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKG 263
T ++ EPKV ++ + + N + E+ L FG G GK G
Sbjct: 306 TFETS---EPKVIESVKDKKISHVCCGENHT---ALITESGLLYTFGDGRHGKLG 354
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 31 VYIWGTN--ANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY +G LGT + +T + P++++S+K I VC + H+ +++ G +++ G
Sbjct: 289 VYTFGLGQFGQLGLGTFTFETSE-PKVIESVKDKKISHVCCGENHTALITESGLLYTFGD 347
Query: 89 GQGGRLGLGSES 100
G+ G+LGLG E+
Sbjct: 348 GRHGKLGLGMEN 359
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ + + +++ G G+LGLGS+++V P K L EK V +
Sbjct: 68 CGDE-HTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEK------VKFVAC 120
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ L G V+ G N+ QLGL
Sbjct: 121 GRNHTLVLTGGGKVYATGGNNEGQLGL 147
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P++ +L + + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKM--ALSFSDAQTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4218
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS + V CG +F + VYTFG
Sbjct: 4219 LGLG-------------NSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4154 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4213
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4214 GDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4273
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4274 GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG-HTNHVR 4332
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + ++ + + + GR HS +++ V
Sbjct: 4333 EPTLV---TVLQGKNIRQISAGRCHSAAWTAPPV 4363
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPK 106
G G+LG G + V PK
Sbjct: 589 GDNGKLGHGDTNRVYKPK 606
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4055 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4114
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4115 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4168
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4169 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 816
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 7/160 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY WG LG G +P L++ L+ I QV SV +S+DG V++ G G
Sbjct: 641 KVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKG 700
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+G +LG +E +V P+ + +D+ +GV S+ H + L G V+ G N Q+
Sbjct: 701 EGWKLGHPTEENVRFPEMVEVLRDRKVVGV---SLGVSHVLALTDQGEVYGWGKNENKQI 757
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS 189
S S + P +LK Q ++GVCCG S ++
Sbjct: 758 CDS---SELFVQQPRLIEALK-GQKVVGVCCGPAQSFAWT 793
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 10/208 (4%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK 60
MT +D++E+ I + + + EVY WG LG G T++ P L+ +LK
Sbjct: 507 MTALDDKEVIKIAAHPEGKHYLALTKDY-EVYSWGNGDGGRLGHGDTSTKEEPTLIQALK 565
Query: 61 RASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
I V +S +S +G +++ G G GRLG G+ ++P ++ D+ + VA
Sbjct: 566 GKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVA 625
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVC 179
S H++ + G V+ G + +LG + +PR K + ++ V
Sbjct: 626 CGSFYA-HTLCITSQGKVYSWGDGDYGKLGRGGSDG-----SKLPRLIEKLQNVKIVQVY 679
Query: 180 CGRFHSVVYSSR-EVYTFGIHAG-QLGH 205
CG SV S VYT+G G +LGH
Sbjct: 680 CGAQFSVALSEDGHVYTWGKGEGWKLGH 707
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 48/101 (47%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ V+ ++ VY WG + LG +++ PE+++ L+ + V + H + ++D
Sbjct: 683 QFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTD 742
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
G V+ G + ++ SE V P+ + K + +GV
Sbjct: 743 QGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVC 783
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY WG LG G+ P+ + +L+ IKQ+ H + V+ G V S G
Sbjct: 86 QVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRN 145
Query: 90 QGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G+LGLG+ + P+K+ FE + V M + +H+ + G ++ G +
Sbjct: 146 QNGQLGLGTTEDSLLPQKIQAFE----SVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 201
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LGL ++ P SS++ + ++ V CG H++ S S +YT+G GQLGH
Sbjct: 202 LGLGDRNDRLL---PEKVSSVEGEKMVL-VACGWRHTITVSDSGNLYTYGWSKYGQLGHG 257
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
++ KV+A +++ I + + G +H+ A TS G +G GW
Sbjct: 258 DF---EDHLVPHKVEA--LKDST---ISQISGGWRHTM-ALTSEGKLYGWGWN 301
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV WG N N LG G+ + +P+ + + + +K + H+ V++DG ++ G G
Sbjct: 138 EVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWG 197
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G LGLG + + P+K+ + E +K + + + H++ + SG+++ G + + Q
Sbjct: 198 RYGNLGLGDRNDRLLPEKVSSVEGEK----MVLVACGWRHTITVSDSGNLYTYGWSKYGQ 253
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
LG H+V P +LK S + + G H++ +S ++Y +G + GQ+G
Sbjct: 254 LGHGDFEDHLV---PHKVEALKDST-ISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG NLG G + R +PE + S++ + V H++ VSD G +++ G
Sbjct: 190 DLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWS 249
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G + P K+ KD ++ S H++ L G ++ G N F Q+
Sbjct: 250 KYGQLGHGDFEDHLVPHKVEALKDST---ISQISGGWRHTMALTSEGKLYGWGWNKFGQV 306
Query: 150 GLSPPPSH 157
G+ H
Sbjct: 307 GVGNNDDH 314
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ +P + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ ++K+ V +A Q S+ ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGSTANQPIPRRVT-GCLQNKVVVNIAC-GQMCSMAVVNTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP S+L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGSSGNQ---PTPCRISALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 293 NKSNQSYPAPVVVEKDRIIE 312
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHIVLATTEGEVFT 122
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K VA S HS+ L G VF G N
Sbjct: 123 WGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSY---HSLVLTSDGEVFAWGYN 179
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR + ++ ++ + CG+ S+ V ++ EVY +G +
Sbjct: 180 NSGQVG-----SGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN 234
Query: 201 GQLG 204
GQLG
Sbjct: 235 GQLG 238
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 14/148 (9%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI-- 100
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ + V
Sbjct: 101 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLMPCHI--STNLSNKQVTEV 157
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
CG +HS+V +S EV+ +G ++GQ+G
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
>gi|33239431|ref|NP_776292.1| protein RCC2 [Mus musculus]
gi|71152034|sp|Q8BK67.1|RCC2_MOUSE RecName: Full=Protein RCC2
gi|26344982|dbj|BAC36140.1| unnamed protein product [Mus musculus]
gi|55991474|gb|AAH86666.1| Regulator of chromosome condensation 2 [Mus musculus]
Length = 520
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + +A+ ++H++ L
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE---AIVLAACGRNHTLAL 215
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 216 TDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKG 271
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 272 NLYSFGCPEYGQLGHN 287
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L+++L +I + H++ ++D G V++ G
Sbjct: 168 KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGEN 227
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 228 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMLMDCKGNLYSFGCPEYGQ 283
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 284 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 343
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 344 DSQKRVFSWGFGGYGRLGHA 363
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ +P + +L + +V +HS+ ++ DG V++ G+
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 154
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ ++K+ V +A Q S+ ++ +G V+V G N Q
Sbjct: 155 NNSGQVGSGSTANQPIPRRVT-GCLQNKVVVNIAC-GQMCSMAVVNTGEVYVWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP S+L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 213 LGLGSSGNQ---PTPCRISALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 206 --------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 269 NKSNQSYPAPVVVEKDRIIE 288
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 41 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHIVLATTEGEVFT 98
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K VA S HS+ L G VF G N
Sbjct: 99 WGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSY---HSLVLTSDGEVFAWGYN 155
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR + ++ ++ + CG+ S+ V ++ EVY +G +
Sbjct: 156 NSGQVG-----SGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN 210
Query: 201 GQLG 204
GQLG
Sbjct: 211 GQLG 214
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 14/148 (9%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 21 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI-- 76
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ + V
Sbjct: 77 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLMPCHI--STNLSNKQVTEV 133
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
CG +HS+V +S EV+ +G ++GQ+G
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
griseus]
gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
Length = 551
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G++G GS ++ P+++ ++K + +A + S+ ++ +G V+V G N
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMC---SMAVVDTGEVYVWGYNGNG 235
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
QLGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 236 QLGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGT 291
Query: 206 ---------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 292 GNKSNQSYPTPVVVEKDRIIE 312
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+E+++ GTN + LG G Q+ P L+SL I + H V + DG V++ G
Sbjct: 65 DEIFVLGTNCSGCLGIGDIQSTIEPRRLNSLTGKKIASLSYGSGPHIVLATTDGEVFTWG 124
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + + P ++ +K + VA S HS+ L G VF G N+
Sbjct: 125 HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYNNS 181
Query: 147 HQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
Q+G S + PIPR + ++ ++ + CG+ S+ V + EVY +G + GQ
Sbjct: 182 GQVG-----SGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQ 236
Query: 203 LG 204
LG
Sbjct: 237 LG 238
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 20/152 (13%)
Query: 63 SIKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL 117
SI+Q C+ F S ++ + D ++ G G LG+G S + P++LN
Sbjct: 44 SIRQACV--FGSAGNEVLYTTVDDEIFVLGTNCSGCLGIGDIQSTIEPRRLN-----SLT 96
Query: 118 GVAMASISQD---HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQP 174
G +AS+S H V G VF G N++ QLG + +H + P I S+ S++
Sbjct: 97 GKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQ 153
Query: 175 LIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+I V CG +HS+V +S EV+ +G ++GQ+G
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
>gi|115461118|ref|NP_001054159.1| Os04g0662800 [Oryza sativa Japonica Group]
gi|113565730|dbj|BAF16073.1| Os04g0662800 [Oryza sativa Japonica Group]
gi|222629715|gb|EEE61847.1| hypothetical protein OsJ_16512 [Oryza sativa Japonica Group]
Length = 549
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
V+ + Y WG N LG G R++P ++ L + + + + + H+V V+DDG+
Sbjct: 83 VALDAEGRCYTWGRNEKGQLGHGDTLQRNLPTVVSELSKYKVIKASVGRNHTVVVTDDGK 142
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL--MLSGSVFV 140
+S GH + G+LG GS + + + + V A D +V+L + ++
Sbjct: 143 SFSFGHNKHGQLGTGSLRNEIETSPMPCLVTEATNAVCGA----DFTVWLSSVEGSTILT 198
Query: 141 CGLNSFHQLGLSPPPSHIV---------SPTPIPRS-SLKSSQPLIGVCCGRFHSV-VYS 189
GL + QLG + + P P PR+ + S + ++ CG H+V V S
Sbjct: 199 AGLPQYGQLGHGTDNEYNIKDSSVKLAYDPQPRPRAIASLSGKTIVKAACGTNHTVAVDS 258
Query: 190 SREVYTFGIHA-GQLGH 205
S VYT+G G+LGH
Sbjct: 259 SGYVYTWGFGGYGRLGH 275
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 45 GSQQTRDVPELLDSLKRASIKQVC--MDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSV 102
G+Q P + SL I+ V H V + +GR ++ G + G+LG G
Sbjct: 51 GAQGNLVSPTRMRSLMGVDIRFVASGCTACHCVALDAEGRCYTWGRNEKGQLGHGDTLQR 110
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
P ++ + K V AS+ ++H+V + G F G N QLG + I + +
Sbjct: 111 NLPTVVS---ELSKYKVIKASVGRNHTVVVTDDGKSFSFGHNKHGQLGTGSLRNEIET-S 166
Query: 163 PIPRSSLKSSQPLIGVCCGRFHSVVYSSRE---VYTFGI-HAGQLGH---SPVTVSSASV 215
P+P +++ + CG +V SS E + T G+ GQLGH + + +SV
Sbjct: 167 PMPCLVTEATNAV----CGADFTVWLSSVEGSTILTAGLPQYGQLGHGTDNEYNIKDSSV 222
Query: 216 ---IEPKVQATIIREDLPGFIFESNRGTKHSFTAETS 249
+P+ + I I ++ GT H+ ++S
Sbjct: 223 KLAYDPQPRPRAIASLSGKTIVKAACGTNHTVAVDSS 259
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 136 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 195
Query: 89 GQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G++G GS ++ P+++ ++K + +A + S+ ++ +G V+V G N
Sbjct: 196 NNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMC---SMAVVDTGEVYVWGYNGNG 252
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
QLGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 253 QLGLGSGGNQ---PTPCRIAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGT 308
Query: 206 ---------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 309 GNKSNQSYPTPVIVEKDRIIE 329
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 82 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHVVLATTEGEVFT 139
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 140 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 196
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR + ++ ++ + CG+ S+ V + EVY +G +
Sbjct: 197 NSGQVG-----SGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGN 251
Query: 201 GQLG 204
GQLG
Sbjct: 252 GQLG 255
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 7/132 (5%)
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML 134
++ + + ++ G G LGLG S + P++L+ K ++ S H V
Sbjct: 76 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHVVLATT 133
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EV 193
G VF G N++ QLG + +H + P I S+ S++ +I V CG +HS+V +S EV
Sbjct: 134 EGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEVACGSYHSLVLTSDGEV 190
Query: 194 YTFGI-HAGQLG 204
+ +G ++GQ+G
Sbjct: 191 FAWGYNNSGQVG 202
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + + L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ ++K+ V +A Q S+ ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGSTANQAIPRRVT-GCLQNKVVVNIAC-GQMCSMAVVDTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 293 NKSNQSYPTPVVVEKDRIIE 312
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN + LG G Q+ P LDSL I C+ H V + +G V+S
Sbjct: 65 DEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKI--ACLSYGSGPHIVLATTEGEVFS 122
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH G+LG G+ + + P ++ +K VA S HS+ L G VF G N
Sbjct: 123 WGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSY---HSLVLTSDGEVFAWGYN 179
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + IPR + ++ ++ + CG+ S+ V + EVY +G +
Sbjct: 180 NSGQVG-----SGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGN 234
Query: 201 GQLG 204
GQLG
Sbjct: 235 GQLG 238
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ DK
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIAC 102
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P+ I S+ S++ + V
Sbjct: 103 LSYG--SGPHIVLATTEGEVFSWGHNAYGQLG-NGTINHGLVPSHI--STNLSNKQVTEV 157
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
CG +HS+V +S EV+ +G ++GQ+G
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
>gi|348570860|ref|XP_003471214.1| PREDICTED: protein RCC2-like [Cavia porcellus]
Length = 453
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ ++ + + +A+ ++H++ L
Sbjct: 92 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIDGLSHEV---IVLAACGRNHTLAL 148
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 149 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 204
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 205 NLYSFGCPEYGQLGHN 220
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L+D L I + H++ +++ G V++ G
Sbjct: 101 KLWSWGRNEKGQLGHGDTKRVEAPRLIDGLSHEVIVLAACGRNHTLALTETGSVFAFGEN 160
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 161 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 216
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H+++
Sbjct: 217 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLIL 276
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 277 DSQKRVFSWGFGGYGRLGHA 296
>gi|313220445|emb|CBY31298.1| unnamed protein product [Oikopleura dioica]
Length = 1097
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 26/209 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ G N LG GS+ + P ++ L + ++ H + ++ DG V+S G G
Sbjct: 543 VFTCGNGENGCLGHGSEHKSSMFPNMVQDLISYDVVKISAGYKHVLALTSDGDVYSWGCG 602
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ GRLG G + S SP+K+ ++K K A D S F+ +SG+++VCG N +++
Sbjct: 603 ELGRLGHGGQGSEFSPRKITSLQEKIKEIYA----GYDSSFFIGISGNMYVCGSNRDNKI 658
Query: 150 GLSP--------------PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVY 194
GL PP TPI L S+Q + + R H+VV +S +++
Sbjct: 659 GLQKRSMLDIFRLGHSRIPP---YKDTPILSRQLNSNQTISKISQARDHTVVLTSTGQLF 715
Query: 195 TFGIHA-GQLG--HSPVTVSSASVIEPKV 220
T G ++ GQ G +S + + + PK+
Sbjct: 716 TMGRNSEGQRGLENSRSMIDCSPIQIPKI 744
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY WG LG G Q + P + SL+ IK++ S F+ G ++ CG
Sbjct: 595 DVYSWGCGELGRLGHGGQGSEFSPRKITSLQE-KIKEIYAGYDSSFFIGISGNMYVCGSN 653
Query: 90 QGGRLGLGSES---------SVVSPKK----LNFEKDKDKLGVAMASISQDHSVFLMLSG 136
+ ++GL S S + P K L+ + + ++ ++ S ++DH+V L +G
Sbjct: 654 RDNKIGLQKRSMLDIFRLGHSRIPPYKDTPILSRQLNSNQT-ISKISQARDHTVVLTSTG 712
Query: 137 SVFVCGLNSFHQLGLSPPPSHI-VSPTPIPRSSLKSSQPLIGVCCGRFHSVV 187
+F G NS Q GL S I SP IP+ K+ Q + + G F + +
Sbjct: 713 QLFTMGRNSEGQRGLENSRSMIDCSPIQIPKIDGKNVQSITHIATGSFMTCI 764
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 17/184 (9%)
Query: 31 VYIWGTNANYNLGTGS---QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
V+ WG N+ +G GS ++ + +P++L L + S+ Q+ HS+ ++ G ++ G
Sbjct: 106 VFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWG 165
Query: 88 HGQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G+LG+G + SS+ P + + + + S HS L SG++F G N +
Sbjct: 166 DNSSGQLGIGKTHSSMSEPAPV---LSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEY 222
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKS--SQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQ 202
QLG+ H + P+P + LKS SQ + V CG H+ V +S V+TFG +GQ
Sbjct: 223 GQLGV-----HDTTDRPLP-TLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQ 276
Query: 203 LGHS 206
LGH+
Sbjct: 277 LGHN 280
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY G+N LG T PE + +++ +I +V K H+V VSD G V++ G
Sbjct: 56 VYTCGSNEFGQLGQEKSHTN--PESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNS 113
Query: 91 GGRLGLGS---ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G++GLGS E PK L K K+ V + +HS+ L +SG +F G NS
Sbjct: 114 YGQIGLGSKVKEKVQTIPKML---KGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSG 170
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
QLG+ S + P P+ SL + P + + G HS SS ++ +G + GQLG
Sbjct: 171 QLGIGKTHSSMSEPAPV--LSL-NGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLG 226
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 114/232 (49%), Gaps = 19/232 (8%)
Query: 31 VYIWGTNANYNLGTGS--QQTRDVPELLDSLKRAS-IKQVCMDKFHSVFVSDDGRVWSCG 87
++ WG + LG G Q+ P LL++L+ +S +++V H+ F+ DG V++CG
Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+ LG E S +P+ ++ + + + + H+V + G VF G NS+
Sbjct: 61 SNEFGQ--LGQEKSHTNPESVH---AIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYG 115
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLGH 205
Q+GL V P L + ++ + CG HS+ + S ++ +G + +GQLG
Sbjct: 116 QIGLGSKVKEKVQTIPKMLKGL-AKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLG- 173
Query: 206 SPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + +S+ EP A ++ + F+ S G HSF A +S G FG G
Sbjct: 174 --IGKTHSSMSEP---APVLSLNGVPFMLIS-AGGAHSF-ALSSSGALFGWG 218
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 17/180 (9%)
Query: 34 WGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGR 93
WG N LG R +P LL SL+ + V + H+ ++ DG V++ G G G+
Sbjct: 217 WGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQ 276
Query: 94 LGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML---SGSVFVCGLNSFHQLG 150
LG S +P+K+ FE +G + I+ + L L SG V+ G QLG
Sbjct: 277 LGHNSNHHEYTPRKV-FE----LMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLG 331
Query: 151 L---SPPPSHIVSPTPIPRS-SLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHS 206
L + S + + P RS ++KS P SVVY+ R + G H + S
Sbjct: 332 LGVTNNCNSPMTAKGPWLRSNNIKSMLPE-----ADGDSVVYTVRRIDAGGDHCFAMASS 386
>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
Length = 947
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 56 LDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDK 114
+ SL I QV +HS+ +S V+ G + G+LGLG++ SP+ L K
Sbjct: 21 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL-----K 75
Query: 115 DKLGVAMASISQ--DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
LG+ ++ HS L LSG++F G N F QLGL+ V P SL+ S
Sbjct: 76 SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV---PNLLKSLR-S 131
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ +CCG H+ + V+TFG GQLGH+ S++ I P+ + E +
Sbjct: 132 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN----STSHEINPRK----VFELMG 183
Query: 231 GFIFESNRGTKHS--FTAETSLGPEFGGGWTGKKG 263
+ E G +H+ F + FG G G+ G
Sbjct: 184 SIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 218
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 20/194 (10%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+EV+ WG N LG G+ + P+LL SL QV HS ++ G ++ G
Sbjct: 46 SEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 105
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+LGL E+ P N K + +DH+ L G VF G +
Sbjct: 106 RNKFGQLGLNDENDRYVP---NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 162
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIG-VCCGRFHSVVY--SSREVYTFGIHA-GQL 203
QLG + SH ++ PR + ++ + CGR H+ + SS +Y+FG+ GQL
Sbjct: 163 QLGHN-STSHEIN----PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQL 217
Query: 204 G-------HSPVTV 210
G SP TV
Sbjct: 218 GTGSTSNRKSPFTV 231
>gi|390341358|ref|XP_003725437.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Strongylocentrotus purpuratus]
Length = 658
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
VS N +EV++WG+N+++ L GSQ+ +P++ ++ A +Q+ ++ + +S DG
Sbjct: 371 VSEN--SEVFVWGSNSSHQLAEGSQEKILLPKM--AISFAESQQIEAGQYCTFVISSDGS 426
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
V +CG G GRLGLG ++ KKLNF+ + ++ + S H++ L G VF G
Sbjct: 427 VRACGKGSYGRLGLGDSNNQTQLKKLNFD-NSIITRISSSKGSDGHTLALTSEGQVFSWG 485
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HA 200
+ +LG + + P + + ++ + G HS V ++YT+G
Sbjct: 486 DGDYGKLGHG---NTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEGDY 542
Query: 201 GQLGH 205
G+LGH
Sbjct: 543 GRLGH 547
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
++Y WG LG G +R+VP L+ + +++ +V H++ VS D R VWS G
Sbjct: 533 QLYTWGEGDYGRLGHGDSNSRNVPTLVKDV--SNVGKVVCGSSHTIAVSQDSRTVWSFGG 590
Query: 89 GQGGRLGLGSESSVVSPK 106
G G+LG G + + PK
Sbjct: 591 GDNGKLGHGDTNRIYKPK 608
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDK--FHSVFVSDDGRVWSCG 87
+V+ WG LG G+ T+ P+++ + + VC+ HS V+DDG++++ G
Sbjct: 480 QVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVV-VCISAGYRHSACVTDDGQLYTWG 538
Query: 88 HGQGGRLGLGSESS 101
G GRLG G +S
Sbjct: 539 EGDYGRLGHGDSNS 552
>gi|218195760|gb|EEC78187.1| hypothetical protein OsI_17792 [Oryza sativa Indica Group]
Length = 549
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 32 YIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
Y WG N LG G R++P ++ L + + + + + H+V V+DDG+ +S GH +
Sbjct: 92 YTWGRNEKGQLGHGDTLQRNLPTVVSELSKYKVIKASVGRNHTVVVTDDGKSFSFGHNKH 151
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL--MLSGSVFVCGLNSFHQL 149
G+LG GS + + + + V A D +V+L + ++ GL + QL
Sbjct: 152 GQLGTGSLRNEIETSPMPCLVTEATNAVCGA----DFTVWLSSVEGSTILTAGLPQYGQL 207
Query: 150 GLSPPPSHIV---------SPTPIPRS-SLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI 198
G + + P P PR+ + S + ++ CG H+V V SS VYT+G
Sbjct: 208 GHGTDNEYNIKDSSVKLAYDPQPRPRAIASLSGKTIVKAACGTNHTVAVDSSGYVYTWGF 267
Query: 199 HA-GQLGH 205
G+LGH
Sbjct: 268 GGYGRLGH 275
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 45 GSQQTRDVPELLDSLKRASIKQVC--MDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSV 102
G+Q P + SL I+ V H V + +GR ++ G + G+LG G
Sbjct: 51 GAQGNLVSPTRMRSLMGVDIRFVASGCTACHCVALDAEGRCYTWGRNEKGQLGHGDTLQR 110
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
P ++ + K V AS+ ++H+V + G F G N QLG + I + +
Sbjct: 111 NLPTVVS---ELSKYKVIKASVGRNHTVVVTDDGKSFSFGHNKHGQLGTGSLRNEIET-S 166
Query: 163 PIPRSSLKSSQPLIGVCCGRFHSVVYSSRE---VYTFGI-HAGQLGH---SPVTVSSASV 215
P+P +++ + CG +V SS E + T G+ GQLGH + + +SV
Sbjct: 167 PMPCLVTEATNAV----CGADFTVWLSSVEGSTILTAGLPQYGQLGHGTDNEYNIKDSSV 222
Query: 216 ---IEPKVQATIIREDLPGFIFESNRGTKHSFTAETS 249
+P+ + I I ++ GT H+ ++S
Sbjct: 223 KLAYDPQPRPRAIASLSGKTIVKAACGTNHTVAVDSS 259
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 7/160 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY WG LG G +P L++ L+ I QV SV +S+DG V++ G G
Sbjct: 641 KVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKG 700
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+G +LG +E +V P+ + +D+ +GV S+ H + L G V+ G N Q+
Sbjct: 701 EGWKLGHPTEENVRFPEMVEVLRDRKVVGV---SLGVSHVLALTDQGEVYGWGKNENKQI 757
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS 189
S S + P +LK Q ++GVCCG S ++
Sbjct: 758 CDS---SELFVQQPRLIEALK-GQKVVGVCCGPAQSFAWT 793
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG G T++ P L+ +LK I V +S +S +G +++ G G
Sbjct: 535 EVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRG 594
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ ++P ++ D+ + VA S H++ + G V+ G + +L
Sbjct: 595 NYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYA-HTLCITSQGKVYSWGDGDYGKL 653
Query: 150 GLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSVVYSSR-EVYTFGIHAG-QLGH 205
G + +PR K + ++ V CG SV S VYT+G G +LGH
Sbjct: 654 GRGGSDG-----SKLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGH 707
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V++WG N LG +P D L + + VS +G++++CG G
Sbjct: 2896 VFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGT 2955
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLGLG ++V P+ + F VA+ S + H++ L L G VF G +LG
Sbjct: 2956 NGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGK-HAMALTLDGKVFSWGEGEDGKLG 3014
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGHSPV 208
+ + P +L+S + + + CG HS + SS E+YT+G+ G+LGH
Sbjct: 3015 HG---NRLNLDKPKMIEALRSKK-IRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG-- 3068
Query: 209 TVSSASVIEPKVQATII 225
+ + ++PK+ +++
Sbjct: 3069 --DNITQLKPKLIKSLV 3083
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 91/229 (39%), Gaps = 57/229 (24%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N+VY WG + LG G++ + P+L+++L+ I + HS ++ G++++ G
Sbjct: 3976 NDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGK 4035
Query: 89 GQGGRLGLGSESSVVSPKKLNF-------------------------------EKDKDKL 117
G+ GRLG G + PK + + D KL
Sbjct: 4036 GRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKL 4095
Query: 118 G--------------------VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSH 157
G V SV L SGSV+ G +H+LG H
Sbjct: 4096 GRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLG-HGTGEH 4154
Query: 158 IVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
+ P + ++L+ + +I + G H V S EV+T+G + GQLG
Sbjct: 4155 VRRPKKV--AALQGKK-IISIATGSLHCVACSDEGEVFTWGDNDEGQLG 4200
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
V+ WG LG G + ++P ++ L + Q+ C +F S+ ++ G VW+ G G
Sbjct: 3108 VFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQF-SLALTKTGEVWTWGKG 3166
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
RLG GS+ V P + KDK + VA+ ++ H + + +G V+ G N Q
Sbjct: 3167 DYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGAL---HCLAVTDTGQVYAWGDNDHGQQ 3223
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE 192
G + IV+ P L+ + V CG HS+ ++ ++
Sbjct: 3224 G---NGTTIVNRKPALVHGLEDVH-INRVACGSSHSIAWTLQD 3262
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V+ WG + LG G++ D P+++++L+ I+ + HS ++ G +++ G G
Sbjct: 3001 KVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLG 3060
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLG---VAMASISQD-HSVFLMLSGSVFVCGLNS 145
+ GRLG G + + PK + K +G V +A S+D ++ L G VF G
Sbjct: 3061 EYGRLGHGDNITQLKPKLI-----KSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGD 3115
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLG 204
F +LG + P I R L + + + C +F + + EV+T+G +LG
Sbjct: 3116 FGKLGRGGSEGCNI-PHNIER--LNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLG 3172
Query: 205 H-SPVTVSSASVIE 217
H S V +VIE
Sbjct: 3173 HGSDQHVRKPTVIE 3186
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 27/200 (13%)
Query: 7 EEMRP--IDHLIRDRKIDVSS----------NQFNEVYIWGTNANYNLGTGSQQTRDVPE 54
++++P I+ L+ + IDV+ + V+ WG LG G VP+
Sbjct: 4048 DQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPK 4107
Query: 55 LLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKD 113
++SL + +V C +F SV ++ G V++ G G RLG G+ V PKK+ +
Sbjct: 4108 KIESLAGLGVIKVECGSQF-SVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQG 4166
Query: 114 KDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS- 172
K + +A S+ H V G VF G N QLG + I R L S+
Sbjct: 4167 KKIISIATGSL---HCVACSDEGEVFTWGDNDEGQLGDD-------TTNAIQRPRLVSAL 4216
Query: 173 --QPLIGVCCGRFHSVVYSS 190
+ + V CG H++ +S+
Sbjct: 4217 QGKKITNVACGSAHTLAWST 4236
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H + ++ D V+S G+G GGRLG G S+ P + K KD + V +S +
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGT---YSAAI 582
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS---VVYS 189
+G+++ G ++ +LG ++PT I S S + +I V CG F++ + S
Sbjct: 583 SANGALYTWGRGNYGRLG-HGTAEDCLTPTMI---SALSDEHIIKVACGSFYAHTLCITS 638
Query: 190 SREVYTFG 197
+VY++G
Sbjct: 639 QGKVYSWG 646
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG + LG GS Q P +++SLK + V + H + V+D G+V++ G
Sbjct: 3159 EVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDN 3218
Query: 90 QGGRLGLGS 98
G+ G G+
Sbjct: 3219 DHGQQGNGT 3227
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 52 VPELLDSLKRASIKQVCMDK--FHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLN 109
VP LL+S++ IK++ ++ H + +S D V+S G G G+LG G+ + +PK +
Sbjct: 3945 VPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIE 4004
Query: 110 FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
+ + + +A HS + +G ++ G + +LG
Sbjct: 4005 ALQGYEIIDIACGGA---HSAAITSTGQLYTWGKGRYGRLG 4042
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 87/213 (40%), Gaps = 10/213 (4%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ V+ ++ VY WG + LG +++ PE+++ L+ + V + H + ++D
Sbjct: 683 QFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTD 742
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGV----AMASISQDHSVFLMLS 135
G V+ G + ++ SE V P+ + K + +GV A + D + +
Sbjct: 743 QGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNERTPKT 802
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYT 195
FV L L +V I + + + + + H ++ ++ + T
Sbjct: 803 AVPFVIDLGE-QTFKLIENLLEVVLTNTIAQDKECIAVSALNLLHLQLHCIISNNLDTKT 861
Query: 196 FGIHA-----GQLGHSPVTVSSASVIEPKVQAT 223
GI A L V ++SAS I P VQ+
Sbjct: 862 LGIGANSKLLNSLKTQVVCLASASDILPSVQSA 894
>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
Length = 560
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
Q ++ WG N + L G+Q+ + P+ + LK +++ + HS V+ DG+++ C
Sbjct: 13 QITYLFAWGRNKDGELSIGNQKKCNAPKAVQGLKNQTVQLISSGSNHSGIVTQDGQLFIC 72
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LG + PK L + K L V + H++ L+ +G V+ G
Sbjct: 73 GSALHGKLGFEDANQPSYPKFLLVQAMKG-LFVTQVATGDYHTLCLLDNGQVYAWGGTLH 131
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG-----IHA 200
+LG + P +LK Q ++ + CG FHS S+ ++YT+G +
Sbjct: 132 KKLGSK-------AGKPARIETLK--QTIVQIGCGDFHSAALSANGDLYTWGGGGRDYNR 182
Query: 201 GQLGHSPVT-VSSASVIEPKV 220
GQLGH + V + +++ +
Sbjct: 183 GQLGHGHLNDVETPQIVKDNI 203
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 27/194 (13%)
Query: 30 EVYIWGTNA-NYN---LGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWS 85
++Y WG +YN LG G + P+++ + +I + +H + + DG +WS
Sbjct: 169 DLYTWGGGGRDYNRGQLGHGHLNDVETPQIV----KDNIVKFSCGGYHMMALDKDGELWS 224
Query: 86 CGHGQGGRLGLGSESSVVSPKKLN-------------FEKDKDKLGVAMASISQDHSVFL 132
G G G G G + PKK+ F ++K + + S+ HS+ L
Sbjct: 225 WGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLL 284
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
G V+ CG QLG+ + I S + ++ + G HS+V +S
Sbjct: 285 SNKGIVYACGYAQHGQLGIKATENQNKFQLVIGI----SGKTIVQIAAGWNHSIVLTSHS 340
Query: 192 EVYTFG-IHAGQLG 204
+VYT G AGQLG
Sbjct: 341 DVYTCGHNQAGQLG 354
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 29/143 (20%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPE-----------LLDSL-----KRASIKQVCMDKFH 73
E++ WG+ G G Q +P+ ++D + + ++IK++ + H
Sbjct: 221 ELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHH 280
Query: 74 SVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ-----DH 128
S+ +S+ G V++CG+ Q G+LG+ + N K + +G++ +I Q +H
Sbjct: 281 SLLLSNKGIVYACGYAQHGQLGIKATE--------NQNKFQLVIGISGKTIVQIAAGWNH 332
Query: 129 SVFLMLSGSVFVCGLNSFHQLGL 151
S+ L V+ CG N QLG+
Sbjct: 333 SIVLTSHSDVYTCGHNQAGQLGV 355
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY G + LG + + ++ +L+ + +I Q+ HS+ ++ V++CGH Q
Sbjct: 290 VYACGYAQHGQLGIKATENQNKFQLVIGISGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQ 349
Query: 91 GGRLGLGSESSVVSPKKLNF 110
G+LG+G S ++NF
Sbjct: 350 AGQLGVGDYESRTQYTRINF 369
>gi|213983021|ref|NP_001135671.1| NIMA-related kinase 9 [Xenopus (Silurana) tropicalis]
gi|197246344|gb|AAI68588.1| Unknown (protein for MGC:185428) [Xenopus (Silurana) tropicalis]
Length = 924
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 16/188 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
++Y +G++ LG +V P L+D ++QV H + ++ V+S G
Sbjct: 428 QLYSFGSDYYGCLGVNQSAGAEVLEPLLVDFFLNEPVEQVSCGDSHIIALTRSKCVYSWG 487
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+ GRLGL SE V SP+K+ ++D L + D S L L+G V CGLN +
Sbjct: 488 CGEYGRLGLDSEDDVYSPQKVEVQRD---LCIVNVCCGSDGSFLLTLTGKVLACGLNEHN 544
Query: 148 QLGLSPPPSHIVS---------PTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
+LGL+ + I++ T + + S + + GR H+ R + TFG
Sbjct: 545 KLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFG 604
Query: 198 IH-AGQLG 204
+ GQLG
Sbjct: 605 SNKCGQLG 612
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK 60
+++++ +P + + I V +++ +EVY+WG G + T P+ LD K
Sbjct: 301 VSMLNRSNKKPRTGTVTEAPIAVVTSRSSEVYVWG---------GGKTT---PQKLDVFK 348
Query: 61 RAS-IKQVCMDKFHSVFVSDDGRVWSCGHGQG-----GRLGLGSESSVVSPKKLNFEKDK 114
+QVC H V+ + +++ + QG G+LG G +S PK + EK +
Sbjct: 349 GGCRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHV--EKLQ 406
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPP-SHIVSPTPIPRSSLKSSQ 173
K V S D +V + G ++ G + + LG++ + ++ P + ++
Sbjct: 407 GK-SVQQVSCGSDFTVCISDEGQLYSFGSDYYGCLGVNQSAGAEVLEPLLV---DFFLNE 462
Query: 174 PLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
P+ V CG H + + S+ VY++G G+LG
Sbjct: 463 PVEQVSCGDSHIIALTRSKCVYSWGCGEYGRLG 495
>gi|47212325|emb|CAF91263.1| unnamed protein product [Tetraodon nigroviridis]
Length = 416
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G G+LG G + +PK + E D L VA A+ ++H++ L
Sbjct: 66 HSLLITAEGKLWSWGRNDKGQLGHGDTKRLEAPKLI--EGLADHLVVA-AACGRNHTLAL 122
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSR 191
GSV+ G N QLG ++SP I QPL+ V CG F VV
Sbjct: 123 TDDGSVYSFGENKLGQLGQGSQTYAVLSPALISY----DGQPLVKVACGAEFSMVVDCKG 178
Query: 192 EVYTFGI-HAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRG 239
+Y+FG GQLGH+ A + II + FI +S G
Sbjct: 179 NLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDG 227
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P+L++ L + + H++ ++DDG V+S G
Sbjct: 75 KLWSWGRNDKGQLGHGDTKRLEAPKLIEGLADHLVVAAACGRNHTLALTDDGSVYSFGEN 134
Query: 90 QGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LG GS++ +V+SP +++ D + + + S+ + G+++ G + Q
Sbjct: 135 KLGQLGQGSQTYAVLSPALISY----DGQPLVKVACGAEFSMVVDCKGNLYSFGCPEYGQ 190
Query: 149 LG 150
LG
Sbjct: 191 LG 192
>gi|37360404|dbj|BAC98180.1| mKIAA1470 protein [Mus musculus]
Length = 484
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + +A+ ++H++ L
Sbjct: 123 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE---AIVLAACGRNHTLAL 179
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 180 TDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKG 235
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 236 NLYSFGCPEYGQLGHN 251
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L+++L +I + H++ ++D G V++ G
Sbjct: 132 KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGEN 191
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 192 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMLMDCKGNLYSFGCPEYGQ 247
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 248 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 307
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 308 DSQKRVFSWGFGGYGRLGHA 327
>gi|330467453|ref|YP_004405196.1| bnr repeat-containing protein [Verrucosispora maris AB-18-032]
gi|328810424|gb|AEB44596.1| bnr repeat-containing protein [Verrucosispora maris AB-18-032]
Length = 411
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++ WG N N LG G+ +R P + D+ A QV K ++ V DG +W G
Sbjct: 82 LWCWGNNFNGQLGDGTTTSRTAPVRIGDATTWA---QVDAGKSNTCAVRTDGTLWCWGAN 138
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G+ +S +P ++ D A S S +H+ + +G+++ GLN+ QL
Sbjct: 139 NNGQLGDGTTTSRTAPVRIG-----DATTWASVSTSNNHTCAVRTTGTLWCWGLNTHAQL 193
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHA-GQLG--- 204
G+ P ++SPTP+ + ++ V G HS V + ++ +G + GQLG
Sbjct: 194 GVGMTP--LMSPTPL---QVGTATTWARVATGYGHSCAVRTDGTLWCWGSSSDGQLGLGI 248
Query: 205 ----HSPVTVSSAS----VIEPKVQATIIREDLPGFIFESN 237
+P V +A+ V V +R D + + N
Sbjct: 249 MSYKTTPTQVGTATTWSAVTTGYVHTCAVRTDGTLWCWGEN 289
>gi|390341372|ref|XP_794518.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
VS N +EV++WG+N+++ L GSQ+ +P++ ++ A +Q+ ++ + +S DG
Sbjct: 371 VSEN--SEVFVWGSNSSHQLAEGSQEKILLPKM--AISFAESQQIEAGQYCTFVISSDGS 426
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
V +CG G GRLGLG ++ KKLNF+ + ++ + S H++ L G VF G
Sbjct: 427 VRACGKGSYGRLGLGDSNNQTQLKKLNFD-NSIITRISSSKGSDGHTLALTSEGQVFSWG 485
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HA 200
+ +LG + + P + + ++ + G HS V ++YT+G
Sbjct: 486 DGDYGKLGHG---NTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEGDY 542
Query: 201 GQLGH 205
G+LGH
Sbjct: 543 GRLGH 547
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
++Y WG LG G +R+VP L+ + +++ +V H++ VS D R VWS G
Sbjct: 533 QLYTWGEGDYGRLGHGDSNSRNVPTLVKDV--SNVGKVVCGSSHTIAVSQDSRTVWSFGG 590
Query: 89 GQGGRLGLGSESSVVSPK 106
G G+LG G + + PK
Sbjct: 591 GDNGKLGHGDTNRIYKPK 608
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDK--FHSVFVSDDGRVWSCG 87
+V+ WG LG G+ T+ P+++ + + VC+ HS V+DDG++++ G
Sbjct: 480 QVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVV-VCISAGYRHSACVTDDGQLYTWG 538
Query: 88 HGQGGRLGLGSESS 101
G GRLG G +S
Sbjct: 539 EGDYGRLGHGDSNS 552
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ SG V+V G N Q
Sbjct: 179 NNSGQVGSGSTINQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDSGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 293 NKSNQSYPTPVTVEKDRIIE 312
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHIVLATTEGEVFT 122
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 179
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S I P P + ++ ++ + CG+ + V S EVY +G + GQ
Sbjct: 180 NSGQVG---SGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQ 236
Query: 203 LG 204
LG
Sbjct: 237 LG 238
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI-- 100
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 101 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 157
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTI 210
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ SG V+V G N Q
Sbjct: 184 NNSGQVGSGSTINQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDSGEVYVWGYNGNGQ 241
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 242 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 297
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 298 NKSNQSYPTPVTVEKDRIIE 317
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 70 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI--ACLSYGSGPHIVLATTEGEVFT 127
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 184
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S I P P + ++ ++ + CG+ + V S EVY +G + GQ
Sbjct: 185 NSGQVG---SGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQ 241
Query: 203 LG 204
LG
Sbjct: 242 LG 243
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 50 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIAC 107
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 108 LSYG--SGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 162
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 163 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTI 215
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY WG LG G+ P+ + +L+ IKQ+ H + V+ G+V S G
Sbjct: 87 QVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGQVQSWGRN 146
Query: 90 QGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G+LGLG+ + P+K+ FE + V M + +H+ + G ++ G +
Sbjct: 147 QNGQLGLGTTEDSLLPQKIQAFE----GVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGN 202
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LGL ++ P SS++ + ++ V CG H++ S S +YT+G GQLGH
Sbjct: 203 LGLGDRNDRLL---PEKVSSVE-GEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHG 258
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
++ K++A +++ I + + G +H+ A TS G +G GW
Sbjct: 259 DF---EDHLVPHKLEA--LKDST---ISQISGGWRHTM-ALTSEGKLYGWGWN 302
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG NLG G + R +PE + S++ + V H++ VSD G +++ G
Sbjct: 191 DLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWS 250
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G + P KL KD ++ S H++ L G ++ G N F Q+
Sbjct: 251 KYGQLGHGDFEDHLVPHKLEALKDST---ISQISGGWRHTMALTSEGKLYGWGWNKFGQV 307
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGI-HAGQLGHSP 207
G+ H SP + Q + V CG H++ S ++ V+++G +GQLG+
Sbjct: 308 GVGNNDDH-CSPVQV---HFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGE 363
Query: 208 VTVSSASVI 216
+ + V+
Sbjct: 364 IVDRNTPVL 372
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V WG N N LG G+ + +P+ + + + +K + H+ V++DG ++ G G
Sbjct: 139 QVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWG 198
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G LGLG + + P+K+ + E +K + + + H++ + SG+++ G + + Q
Sbjct: 199 RYGNLGLGDRNDRLLPEKVSSVEGEK----MVLVACGWRHTITVSDSGNLYTYGWSKYGQ 254
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
LG H+V P +LK S + + G H++ +S ++Y +G + GQ+G
Sbjct: 255 LGHGDFEDHLV---PHKLEALKDST-ISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 308
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G + P L+++L+ Q+ H+V ++DDG+V++ G G
Sbjct: 3 VYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGD 62
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG G P+ + +DK V S H+ + +SG ++ G + +LG
Sbjct: 63 DGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSY---HTAAVTVSGELYTWGGGMYGKLG 119
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV-YSSREVYTFGI-------HAGQ 202
H TP S+K + V CG H+VV +++VYT+G H
Sbjct: 120 HGNENGH---STPSLVESIKGLY-VRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDT 175
Query: 203 LGH--SPVTVSSASVIEPK 219
GH SP VS I K
Sbjct: 176 SGHQYSPYCVSELVEINIK 194
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 101/237 (42%), Gaps = 17/237 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY WG + LG G + VP L++ L+ ++QV +H+ V+ G +++ G G
Sbjct: 54 KVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGG 113
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G+E+ +P + K L V + H+V L+ + V+ G
Sbjct: 114 MYGKLGHGNENGHSTPSLVESIK---GLYVRQVACGSRHTVVLLENQDVYTWGDKENGVS 170
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGH-S 206
G H SP + S L CG FH+ S +V+TFG G+LGH S
Sbjct: 171 GHGDTSGHQYSPYCV--SELVEINIKQISACG-FHTAALSENGQVFTFGEGKFGRLGHNS 227
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKG 263
A I+ + I + GF + + H FT +GGG G+ G
Sbjct: 228 ERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFT--------WGGGEHGQLG 276
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V+ +G LG S++ + V + +D+L IKQV FH+ V++ G V++ G G
Sbjct: 211 QVFTFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGG 270
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G + + + P ++ DK+ + + H+V L G VF G +L
Sbjct: 271 EHGQLGHGDKVNQIIPTRVESLIDKN---IIQLTCGWSHTVALTDKGEVFTWGNGDHGKL 327
Query: 150 G 150
G
Sbjct: 328 G 328
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 10 RPIDHLIRDRKIDVSSNQFN--------EVYIWGTNANYNLGTGSQQTRDVPELLDSLKR 61
+ ID LI R V+ F+ V+ WG + LG G + + +P ++SL
Sbjct: 235 KCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLID 294
Query: 62 ASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAM 121
+I Q+ H+V ++D G V++ G+G G+LG + V PK + E K +++
Sbjct: 295 KNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLI--ETFNSKRVISV 352
Query: 122 ASISQDHSVFLM 133
AS ++ H+V L+
Sbjct: 353 ASYNE-HTVALV 363
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
VSSN E+ ++G N LG Q + P+L+DSL I +V +H++ ++ G
Sbjct: 626 VSSN--GELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGE 683
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
V+S G G+LGLG ++ P + + + S H+V + G + G
Sbjct: 684 VYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWG 743
Query: 143 LNSFHQLGL-SPPPSHIVSPTPIPRSS-LKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI- 198
N + QLG+ S + P+P SS +K++ CG +H+++ S V FG
Sbjct: 744 RNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTAS------CGCYHTLILMSNGRVMVFGRN 797
Query: 199 HAGQLGHSPVTVSSASVIEP 218
+ GQLG T+ SA + P
Sbjct: 798 NKGQLGAGSRTLPSADLPLP 817
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 7/134 (5%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H + V+ DG V+S G+ G+LGLGS S ++ + ++K + A++S HS +
Sbjct: 568 HMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRM-IDSLREKYHITTAAVSYHHSAVV 626
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSR 191
+G + + G+N QLGL H +P + SL SSQ + V CG +H++ + S
Sbjct: 627 SSNGELLMFGMNDCGQLGLD-HTQHQHTPQLV--DSL-SSQVITEVACGLYHTIAITSGG 682
Query: 192 EVYTFGIH-AGQLG 204
EVY+FG + GQLG
Sbjct: 683 EVYSFGKNDYGQLG 696
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 18/155 (11%)
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHS 129
++ SV DD ++SCG G L LG +S + + F K A+ I+ +
Sbjct: 458 ERLLSVASFDDCELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAK-----AIRDIAGGNE 512
Query: 130 VF--LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV- 186
V +M G+VF CGLN Q G ++ TP+ R+ ++ G H +
Sbjct: 513 VLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPV-RALSGIVINMVAAANGCEHMLA 571
Query: 187 VYSSREVYTFGIH-AGQLG--------HSPVTVSS 212
V S VY++G + GQLG H+P + S
Sbjct: 572 VASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDS 606
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 11/206 (5%)
Query: 18 DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFV 77
+R + V+S E++ G N L G + E + +I+ + V
Sbjct: 458 ERLLSVASFDDCELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAVV 517
Query: 78 SDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS 137
DG V++CG + G+ G G+ V + + A+ +H + + G+
Sbjct: 518 MKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGA 577
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTF 196
V+ G N QLGL S S TP SL+ + HS V SS E+ F
Sbjct: 578 VYSWGYNDRGQLGLGSTISK--SHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMF 635
Query: 197 GIH-AGQLG-------HSPVTVSSAS 214
G++ GQLG H+P V S S
Sbjct: 636 GMNDCGQLGLDHTQHQHTPQLVDSLS 661
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 122 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 181
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 182 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIA-CGQMCCMAVVDTGEVYVWGYNGNGQ 239
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 240 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 295
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 296 NKSNQSYPTPVTVEKDRIIE 315
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 68 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATTEGEVFT 125
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 126 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 182
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQ
Sbjct: 183 NSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 239
Query: 203 LG 204
LG
Sbjct: 240 LG 241
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 48 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI-- 103
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 104 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 160
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 161 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 213
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 241
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 242 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 297
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 298 NKSNQSYPTPVTVEKDRIIE 317
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 70 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATTEGEVFT 127
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 184
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQ
Sbjct: 185 NSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 241
Query: 203 LG 204
LG
Sbjct: 242 LG 243
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML 134
++ + + ++ G G LGLG S + P++L+ K ++ S H V
Sbjct: 64 LYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATT 121
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EV 193
G VF G N++ QLG + +H + P I S+ S++ +I V CG +HS+V +S EV
Sbjct: 122 EGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEVACGSYHSLVLTSDGEV 178
Query: 194 YTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 215
>gi|406696528|gb|EKC99813.1| hypothetical protein A1Q2_05892 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1375
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 49/212 (23%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSL--KRAS-------------IKQVCMDKFHS 74
+++ WG N NY LGT + P+ ++ L ++AS +K + M K H+
Sbjct: 108 DLFTWGVNRNYALGTPDSSDKAFPDRINLLTQRQASDNPDPAQRFFNVGVKDIKMGKLHT 167
Query: 75 VFVSDDGR--VWSCGHGQGGRLG--LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
V+ + R + CG G GGRLG L S+ ++V L + ++ QDH++
Sbjct: 168 AVVTTEARGNLSLCGFGSGGRLGRSLHSQLALVPLPDLPHT-------IVDIALGQDHTL 220
Query: 131 FLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI-------------- 176
L G + G N F QLG +++ P K LI
Sbjct: 221 ALTSGGYILSWGNNRFGQLG------YVIDAPETPNPFAKDGDELIQTSPKRIIGSLKKE 274
Query: 177 ---GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GR S +++ +YT+G + G LG+
Sbjct: 275 WVRGVAAGRMSSACWTADGLYTWGTNLGHLGY 306
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 89 GQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G++G GS ++ P+++ ++K + +A + S+ ++ +G V+V G N
Sbjct: 155 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMC---SMAVVDTGEVYVWGYNGNG 211
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
QLGL + PTP ++L+ + + V CG H++V + ++Y +G ++ GQLG
Sbjct: 212 QLGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGT 267
Query: 206 ---------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 268 GNKSNQSYPTPVVVEKDRIIE 288
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+E+++ GTN + LG G Q+ P LDSL I + H V + DG V++ G
Sbjct: 41 DEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + + P ++ +K + VA S HS+ L G VF G N+
Sbjct: 101 HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYNNS 157
Query: 147 HQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
Q+G S + PIPR + ++ ++ + CG+ S+ V + EVY +G + GQ
Sbjct: 158 GQVG-----SGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQ 212
Query: 203 LG 204
LG
Sbjct: 213 LG 214
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 20/151 (13%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LG+G S + P++L+ G
Sbjct: 21 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLD-----SLTG 73
Query: 119 VAMASISQD---HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
+AS+S H V G VF G N++ QLG + +H + P I S+ S++ +
Sbjct: 74 KKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQV 130
Query: 176 IGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
I V CG +HS+V +S EV+ +G ++GQ+G
Sbjct: 131 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 161
>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
Length = 953
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 56 LDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDK 114
+ SL I QV +HS+ +S V+ G + G+LGLG++ SP+ L K
Sbjct: 27 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL-----K 81
Query: 115 DKLGVAMASISQ--DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
LG+ ++ HS L LSG++F G N F QLGL+ V P SL+ S
Sbjct: 82 SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV---PNLLKSLR-S 137
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ +CCG H+ + V+TFG GQLGH+ S++ I P+ + E +
Sbjct: 138 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN----STSHEINPRK----VFELMG 189
Query: 231 GFIFESNRGTKHS--FTAETSLGPEFGGGWTGKKG 263
+ E G +H+ F + FG G G+ G
Sbjct: 190 SIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 224
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 20/194 (10%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+EV+ WG N LG G+ + P+LL SL QV HS ++ G ++ G
Sbjct: 52 SEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG 111
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+LGL E+ P N K + +DH+ L G VF G +
Sbjct: 112 RNKFGQLGLNDENDRYVP---NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 168
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIG-VCCGRFHSVVY--SSREVYTFGIHA-GQL 203
QLG + SH ++ PR + ++ + CGR H+ + SS +Y+FG+ GQL
Sbjct: 169 QLGHN-STSHEIN----PRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQL 223
Query: 204 G-------HSPVTV 210
G SP TV
Sbjct: 224 GTGSTSNRKSPFTV 237
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G++G GS ++ P+++ ++K + +A + S+ ++ +G V+V G N
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMC---SMAVVDTGEVYVWGYNGNG 235
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
QLGL + PTP ++L+ + + V CG H++V + ++Y +G ++ GQLG
Sbjct: 236 QLGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGT 291
Query: 206 ---------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 292 GNKSNQSYPTPVVVEKDRIIE 312
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+E+++ GTN + LG G Q+ P LDSL I + H V + DG V++ G
Sbjct: 65 DEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWG 124
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + + P ++ +K + VA S HS+ L G VF G N+
Sbjct: 125 HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYNNS 181
Query: 147 HQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
Q+G S + PIPR + ++ ++ + CG+ S+ V + EVY +G + GQ
Sbjct: 182 GQVG-----SGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQ 236
Query: 203 LG 204
LG
Sbjct: 237 LG 238
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 20/151 (13%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LG+G S + P++L+ G
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLD-----SLTG 97
Query: 119 VAMASISQD---HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
+AS+S H V G VF G N++ QLG + +H + P I S+ S++ +
Sbjct: 98 KKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQV 154
Query: 176 IGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
I V CG +HS+V +S EV+ +G ++GQ+G
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
>gi|401881519|gb|EJT45818.1| hypothetical protein A1Q1_05731 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1375
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 49/212 (23%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSL--KRAS-------------IKQVCMDKFHS 74
+++ WG N NY LGT + P+ ++ L ++AS +K + M K H+
Sbjct: 108 DLFTWGVNRNYALGTPDSSDKAFPDRINLLTQRQASDNPDPAQRFFNVGVKDIKMGKLHT 167
Query: 75 VFVSDDGR--VWSCGHGQGGRLG--LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
V+ + R + CG G GGRLG L S+ ++V L + ++ QDH++
Sbjct: 168 AVVTTEARGNLSLCGFGSGGRLGRSLHSQLALVPLPDLPHT-------IVDIALGQDHTL 220
Query: 131 FLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI-------------- 176
L G + G N F QLG +++ P K LI
Sbjct: 221 ALTSGGYILSWGNNRFGQLG------YVIDAPETPNPFAKDGDELIQTSPKRIIGSLKKE 274
Query: 177 ---GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GR S +++ +YT+G + G LG+
Sbjct: 275 WVRGVAAGRMSSACWTADGLYTWGTNLGHLGY 306
>gi|148222256|ref|NP_001090238.1| NIMA-related kinase 8 [Xenopus laevis]
gi|50417684|gb|AAH77830.1| Nek8 protein [Xenopus laevis]
Length = 658
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 25/193 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+ +G+ +N LG + P+++++L I V H++ VS++ V+S G G
Sbjct: 379 IMTFGSGSNGCLGHDNFNDVTQPKIVEALLGYEIVHVSCGASHAIAVSNEKEVFSWGRGD 438
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLGLGS+ S SP+++N ++ + + D S+ L ++ + CG N F++LG
Sbjct: 439 NGRLGLGSQDSHNSPQQVNIPQEYEAQKIVCGI---DSSMILTVANQLLACGSNRFNKLG 495
Query: 151 LSPPPSHIVSP---------------TPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVY 194
L HI+S TPI + L + + ++ G HS V ++ + Y
Sbjct: 496 L----DHILSASEPYSEEQVEEAYTFTPIQSAPL-NQEAILCADVGTSHSAVVTALGQCY 550
Query: 195 TFGIHA-GQLGHS 206
TFG + GQLG S
Sbjct: 551 TFGSNQHGQLGTS 563
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG N LG GSQ + + P+ ++ + +++ S+ ++ ++ +CG
Sbjct: 430 EVFSWGRGDNGRLGLGSQDSHNSPQQVNIPQEYEAQKIVCGIDSSMILTVANQLLACGSN 489
Query: 90 QGGRLGLGSESSVVSP-------KKLNFEKDK----DKLGVAMASISQDHSVFLMLSGSV 138
+ +LGL S P + F + ++ + A + HS + G
Sbjct: 490 RFNKLGLDHILSASEPYSEEQVEEAYTFTPIQSAPLNQEAILCADVGTSHSAVVTALGQC 549
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI 198
+ G N QLG S H S P ++L+ + C + V + +V+T+G
Sbjct: 550 YTFGSNQHGQLGTS---VHRNSRVPCLVTALQGLTVTMAACGDAYTVAVGAEGQVFTWGK 606
Query: 199 HA-GQLG 204
A G+LG
Sbjct: 607 GARGRLG 613
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 28 FNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+ Y +G+N + LGT + VP L+ +L+ ++ ++V V +G+V++ G
Sbjct: 546 LGQCYTFGSNQHGQLGTSVHRNSRVPCLVTALQGLTVTMAACGDAYTVAVGAEGQVFTWG 605
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEK 112
G GRLG E + PK + E+
Sbjct: 606 KGARGRLGRRDE-GIGIPKIVQLEE 629
>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
carolinensis]
Length = 530
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L+SL I+ + H V ++DG V++ G
Sbjct: 40 DEVFVFGLNCSNCLGTGDNQSTIVPKKLESLSGKRIRSLSYGSGPHVVLSTEDGEVYAWG 99
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
H +LG G+ + V+P ++ K V + HS+ L G V+ G N+
Sbjct: 100 HNGYSQLGNGTTNQGVTPIQVCTNLLIKK--VIEVACGSHHSLALSSDGDVYAWGYNNCG 157
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP S+ ++ ++ + CG+ SV + + EVY +G + GQLG
Sbjct: 158 QVGSGSTANQ---PTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGNGQLG 213
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 96/185 (51%), Gaps = 9/185 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDG 81
V S + EVY WG N LG G+ P ++ +L + +V HS+ +S DG
Sbjct: 87 VLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDG 146
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
V++ G+ G++G GS ++ +P+K++ + K+ V++A Q SV ++ +G V+
Sbjct: 147 DVYAWGYNNCGQVGSGSTANQPTPRKVS-NCLQTKIVVSIAC-GQTSSVAIVDNGEVYGW 204
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV-YTFGIHA 200
G N QLGL + + TP ++L+ ++ + CG H++ + + Y++G +
Sbjct: 205 GYNGNGQLGLGNNGNQL---TPCRVAALQGV-CIMQIACGYAHTLALTDEGLMYSWGANT 260
Query: 201 -GQLG 204
GQLG
Sbjct: 261 YGQLG 265
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L+ I Q+ H++ ++D+G ++S G
Sbjct: 200 EVYGWGYNGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGAN 259
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++S+ +SP ++ EK++
Sbjct: 260 TYGQLGTGNKSNQLSPGQILMEKER 284
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + A+I++ C+ +++++ + V+ G LG G S + PKKL E
Sbjct: 11 LLSPQEIATIRKACVFGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKL--E 68
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
K +++ S H V G V+ G N + QLG + TPI +
Sbjct: 69 SLSGKRIRSLSYGSGPHVVLSTEDGEVYAWGHNGYSQLGNGTTNQGV---TPIQVCTNLL 125
Query: 172 SQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ +I V CG HS+ SS +VY +G + GQ+G
Sbjct: 126 IKKVIEVACGSHHSLALSSDGDVYAWGYNNCGQVG 160
>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
Length = 1099
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 29/199 (14%)
Query: 25 SNQFNEVYIWGTNANYNL---------GTGSQQTRDVPELLDSLKRASIKQVCMDKFHSV 75
++ +VYIWG + G+G Q VP+ L+S ++ + + H+
Sbjct: 259 NDALGDVYIWGEGTGDGILGGGVHRIGGSGVQMDSFVPKALESAVLLDVQAIACGRQHAA 318
Query: 76 FVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
V+ G V+S G GGRLG G +S V PK ++ K+ V + + + HS + LS
Sbjct: 319 LVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLKN---FNVELVACGEYHSCAVTLS 375
Query: 136 GSVFVCGLNSFH--QLGLSPPPSHIVSPTPIPRSSLKSSQPLIG-----VCCGRFHS-VV 187
G +++ G N+++ LG + V PR K PL G V CG +H+ VV
Sbjct: 376 GDLYIWGGNAYNFGLLGCGSEATQWV-----PR---KLDGPLEGIHVSSVSCGPWHTAVV 427
Query: 188 YSSREVYTFGIHA-GQLGH 205
S+ +++TFG G LGH
Sbjct: 428 TSAGQLFTFGDGTFGVLGH 446
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V+ WG N + L +T VP L+ L I+Q+ H++ ++ +G+V+S G+
Sbjct: 279 DVFAWGDNTSGQLCLRELKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNN 338
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
Q G+LG+G + P +L K + A + +DHSV L +G V+ G QL
Sbjct: 339 QFGQLGVGDTAPHTIPSRL---KTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQL 395
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY--SSREVYTFGIHA-GQLG 204
G + I +P I KS+ V CGR H++V+ + ++Y FG+ GQLG
Sbjct: 396 GHGTLQNEI-NPRMIFELMGKSASQ---VLCGRRHTIVFFPKTNKIYAFGLGGNGQLG 449
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 28 FN-EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
FN +VY WG N LG G +P L +L+ + + HSV +++ G V+S
Sbjct: 328 FNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSF 387
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASI--SQDHS-VFLMLSGSVFVCGL 143
G G G+LG G+ + ++P+ + FE +G + + + + H+ VF + ++ GL
Sbjct: 388 GAGGQGQLGHGTLQNEINPRMI-FE----LMGKSASQVLCGRRHTIVFFPKTNKIYAFGL 442
Query: 144 NSFHQLGLS---PPPSHIVSP--------TPIPRSSLKSS 172
QLG P H+++P TPI R + +S
Sbjct: 443 GGNGQLGTGVGVEPQQHVLTPMLVRVLDATPILRIATGAS 482
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P L+ +L I Q+ S+ +S+ G V++ G G+L L +V P +
Sbjct: 250 PRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLV---- 305
Query: 113 DKDKLGVAMASISQ--DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLK 170
K+ G+ + ++ H++ L +G V+ G N F QLG+ +P IP S LK
Sbjct: 306 -KELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGD-----TAPHTIP-SRLK 358
Query: 171 S--SQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
+ Q + CG HSVV + VY+FG GQLGH
Sbjct: 359 TLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGH 397
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 17 RDRKIDVSSNQF-NEVYIWG--TNANYNLGTGSQQTRDVPE--LLDSLKRASIK----QV 67
RD + + Q V+ WG T+ L + T VPE L++ S+ +
Sbjct: 70 RDTVVPAAHAQLAGSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAI 129
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD 127
+ H++F+ D G+V+SCG G+LG S P++++ + + + +
Sbjct: 130 ACGRAHTLFLVD-GQVYSCGSNDQGQLGHKKHRS--KPERVD---ALEPYTITQIACGET 183
Query: 128 HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
HS+ L +G VF G N QLGL+P S S P RSS
Sbjct: 184 HSLALTSNGQVFAWGDNKASQLGLTPSES---SRQPSTRSS 221
>gi|449670564|ref|XP_004207295.1| PREDICTED: protein RCC2-like [Hydra magnipapillata]
Length = 481
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 27/199 (13%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY G NA LG + R P L++SLK I+ V + H +F++ +G V+SCG +
Sbjct: 94 VYSCGLNAKGQLGHDDLKNRRNPCLIESLKDHQIETVATGRQHGLFLTKEGIVFSCGDNK 153
Query: 91 GGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+ G+G++ VV+ P +N+ + + + S+ L G VF GL + QL
Sbjct: 154 NGQCGIGNKKEVVTVPTPINYTGPP----IVQIACGGEFSLILNEDGVVFSFGLPEYGQL 209
Query: 150 GLSPPPSHI--------VSPTPIPRSSLKSSQP------------LIGVCCGRFHSVVYS 189
GL I +P+P +S P + + CG H
Sbjct: 210 GLGSENKEISARKEVFHCEYSPVPLTSFVEIDPDEGGTIFLGKPKITKIACGVNHCCAID 269
Query: 190 SRE-VYTFGIHA-GQLGHS 206
++ ++T+G G+LGH+
Sbjct: 270 DKQRLFTWGFGGYGRLGHN 288
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 54 ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKD 113
+ LD +K ++ + F VSD+GRV+SCG G+LG + +P + KD
Sbjct: 66 QTLDGIKIHTVSSGSVSYFFYA-VSDEGRVYSCGLNAKGQLGHDDLKNRRNPCLIESLKD 124
Query: 114 KDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQ 173
+ + + H +FL G VF CG N Q G+ + PTPI +
Sbjct: 125 HQ---IETVATGRQHGLFLTKEGIVFSCGDNKNGQCGIGNKKEVVTVPTPINY----TGP 177
Query: 174 PLIGVCC-GRFHSVVYSSREVYTFGI-HAGQLG------------------HSPVTVSSA 213
P++ + C G F ++ V++FG+ GQLG +SPV ++S
Sbjct: 178 PIVQIACGGEFSLILNEDGVVFSFGLPEYGQLGLGSENKEISARKEVFHCEYSPVPLTSF 237
Query: 214 SVIEPKVQATII 225
I+P TI
Sbjct: 238 VEIDPDEGGTIF 249
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 20/237 (8%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S ++VY WG LG G+ P+ + +L+ IKQ+ H + V+ G V
Sbjct: 82 SEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVL 141
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
S G Q G+LGLG+ + P+ + FE + V M + +H+ + G ++ G
Sbjct: 142 SWGRNQNGQLGLGTTEDSLLPQTIQAFE----GISVKMIAAGAEHTAAVTEDGDIYGWGW 197
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
+ LGL V P SS++ + ++ V CG H++ V SS +YT+G G
Sbjct: 198 GRYGNLGLGDRNDRFV---PEKVSSVEGDK-MVLVACGWRHTITVSSSGSLYTYGWSKYG 253
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGW 258
QLGH ++ KV+A +++ I + G +H+ A TS G +G GW
Sbjct: 254 QLGHGDF---EDHLVPHKVEA--LKDSSTSQI---SGGWRHTM-ALTSDGKLYGWGW 301
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG NLG G + R VPE + S++ + V H++ VS G +++ G
Sbjct: 191 DIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWS 250
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G + P K+ KD + S H++ L G ++ G N F Q+
Sbjct: 251 KYGQLGHGDFEDHLVPHKVEALKDSS---TSQISGGWRHTMALTSDGKLYGWGWNKFGQV 307
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGI-HAGQLGHSP 207
G H SP + + Q + V CG H++ ++ ++ V+ +G +GQLGH
Sbjct: 308 GAGDNADH-CSPAQV---NFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGE 363
Query: 208 VTVSSASVI 216
+ + VI
Sbjct: 364 IVDRNTPVI 372
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV WG N N LG G+ + +P+ + + + S+K + H+ V++DG ++ G G
Sbjct: 139 EVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWG 198
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G LGLG + P+K+ + E DK + + + H++ + SGS++ G + + Q
Sbjct: 199 RYGNLGLGDRNDRFVPEKVSSVEGDK----MVLVACGWRHTITVSSSGSLYTYGWSKYGQ 254
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
LG H+V P +LK S + G H++ +S ++Y +G + GQ+G
Sbjct: 255 LGHGDFEDHLV---PHKVEALKDSS-TSQISGGWRHTMALTSDGKLYGWGWNKFGQVG 308
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD 80
I VSS+ +Y +G + LG G + VP +++LK +S Q+ H++ ++ D
Sbjct: 236 ITVSSS--GSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSD 293
Query: 81 GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
G+++ G + G++G G + SP ++NF +++ VA + H++ +VF
Sbjct: 294 GKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQK---VAQVACGWRHTLAFTEKKNVFA 350
Query: 141 CGLNSFHQLG 150
G + QLG
Sbjct: 351 WGRGTSGQLG 360
>gi|449665602|ref|XP_002165309.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Hydra magnipapillata]
Length = 731
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG+N +G S+ + V P+L+ L I Q+C HS+ ++ G +++ G
Sbjct: 87 VFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNCPIIQICAGGHHSLALTISGTIFAWGKN 146
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG + + P K+ K V S ++HSV L +G V+ G S QL
Sbjct: 147 SFGQLGLGDQQDRLFPTKIQSMNGKH---VRYISCGEEHSVLLTSAGRVYTFGCGSSGQL 203
Query: 150 GLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSV--VYSSREVYTFGIHA-GQLG 204
G + IP+ + P+ + CGR H++ V ++Y+FG++ GQLG
Sbjct: 204 GHNEFEDQF-----IPKMVVDLMGTPVTQIACGRKHTLAHVMKGNKLYSFGLNVKGQLG 257
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 95/211 (45%), Gaps = 42/211 (19%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASI---KQVCMDKF-----HSVFVSD--- 79
+Y WG NA LG + Q +D E +D+ I C++K H++F+S
Sbjct: 3 MYSWGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNTSFCIEKIICGWNHTLFLSGGLV 62
Query: 80 ---------------------DGRVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKL 117
DG V+S G + G++G+ S+ VSP+ + +D
Sbjct: 63 YASGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSKFHKYVSPQLV---RDLSNC 119
Query: 118 GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG 177
+ HS+ L +SG++F G NSF QLGL + PT I + K +
Sbjct: 120 PIIQICAGGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRLF-PTKIQSMNGKHVRY--- 175
Query: 178 VCCGRFHSVVYSSR-EVYTFGI-HAGQLGHS 206
+ CG HSV+ +S VYTFG +GQLGH+
Sbjct: 176 ISCGEEHSVLLTSAGRVYTFGCGSSGQLGHN 206
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N+ LG G QQ R P + S+ ++ + + HSV ++ GRV++ G G
Sbjct: 140 IFAWGKNSFGQLGLGDQQDRLFPTKIQSMNGKHVRYISCGEEHSVLLTSAGRVYTFGCGS 199
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGS-VFVCGLNSFH 147
G+LG PK + D +G + I+ + H++ ++ G+ ++ GLN
Sbjct: 200 SGQLGHNEFEDQFIPKMV-----VDLMGTPVTQIACGRKHTLAHVMKGNKLYSFGLNVKG 254
Query: 148 QLGL 151
QLG+
Sbjct: 255 QLGI 258
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 30 EVYIWGTNANYNLGTG--SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+V+ WG+N + LG G + +P ++ L + QV H+V ++ G++++ G
Sbjct: 114 QVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWG 173
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGL +++ P+ ++ L + + DH++ L +SG++F G NSF
Sbjct: 174 SNNHGQLGLANKTPQNEPQWVSC---ISGLPIVRVAAGADHNLVLTISGALFAWGCNSFG 230
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGH 205
QLG+ P +L+ +Q + + CG HS+ + V+TFG GQLGH
Sbjct: 231 QLGVGDDQDR---GAPTLVKTLR-NQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGH 286
Query: 206 S 206
+
Sbjct: 287 N 287
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG+N + LG ++ ++ P+ + + I +V H++ ++ G +++ G
Sbjct: 168 QIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCN 227
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG+G + +P + +++ G+ + DHS+ L G VF G + QL
Sbjct: 228 SFGQLGVGDDQDRGAPTLVKTLRNQ---GICALACGDDHSLALTRDGGVFTFGAGMYGQL 284
Query: 150 GLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSVVY--SSREVYTFGIHA-GQLG 204
G + + + +PR + + + CGR HS+ Y SS VY FG+ GQLG
Sbjct: 285 GHNTSNNEL-----LPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLG 338
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 13/179 (7%)
Query: 31 VYIWGTNANYNLGTG--SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
V WG+ + LG G ++T +P + S + + H++FV DGRV SCG+
Sbjct: 11 VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGN 70
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ LG E P ++ +++ V AS HS L +G VF G N +Q
Sbjct: 71 NDYGQ--LGHEKPCKRPALIDSLGERN---VLQASSGTKHSTVLTDAGQVFTWGSNEDNQ 125
Query: 149 LGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
LG S + T IPR + ++ V CG H+V + ++ ++YT+G + GQLG
Sbjct: 126 LGRGQVDS---ASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLG 181
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSV-FVSDDGRVWSCGHG 89
V+ +G LG + +P + L +S+ Q+ + HS+ +V GRV+ G G
Sbjct: 273 VFTFGAGMYGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLG 332
Query: 90 QGGRLGLGSESSVVSP 105
G+LG GS + +SP
Sbjct: 333 GNGQLGTGSTVNRMSP 348
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 155 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 213 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 269 NKSNQSYPTPVTVEKDRIIE 288
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 41 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATTEGEVFT 98
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 99 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 155
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQ
Sbjct: 156 NSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 212
Query: 203 LG 204
LG
Sbjct: 213 LG 214
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 21 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI-- 76
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 77 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 133
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 186
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 155 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 213 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 269 NKSNQSYPTPVTVEKDRIIE 288
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G ++ P LDSL I C+ H V + +G V++
Sbjct: 41 DEIFVLGTNCCGCLGLGDVRSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATTEGEVFT 98
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 99 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 155
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQ
Sbjct: 156 NSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 212
Query: 203 LG 204
LG
Sbjct: 213 LG 214
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 21 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVRSTIEPRRLDSLNGKKI-- 76
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 77 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 133
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 186
>gi|209152366|gb|ACI33109.1| RCC2 homolog [Salmo salar]
Length = 496
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G + +PK + E D++ VA A+ ++H++ L
Sbjct: 135 HSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLI--EALADEVVVA-AACGRNHTLAL 191
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSR 191
G+ + G N QLG ++SP I + QPL+ V CG F VV
Sbjct: 192 TEGGTAYSFGENKLGQLGQGNQTDAVLSPALIQY----NGQPLVKVACGAEFSMVVDCKG 247
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 248 NLYSFGCPEYGQLGHN 263
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 89/206 (43%), Gaps = 39/206 (18%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P+L+++L + + H++ +++ G +S G
Sbjct: 144 KLWSWGRNEKGQLGHGDTKRLEAPKLIEALADEVVVAAACGRNHTLALTEGGTAYSFGEN 203
Query: 90 QGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LG G+++ +V+SP + + + + + S+ + G+++ G + Q
Sbjct: 204 KLGQLGQGNQTDAVLSPALIQYNGQP----LVKVACGAEFSMVVDCKGNLYSFGCPEYGQ 259
Query: 149 LGLSPPPSHIVSP--------------------------TPIPRSSLKSSQPLIGVCCGR 182
LG + I TP+P ++ V CG
Sbjct: 260 LGHNSDGKFIARAQRIEFDCETIARRVAIFIEKSKDGQVTPVPNVVVRD------VACGG 313
Query: 183 FHSVVYSS-REVYTFGIHA-GQLGHS 206
H+++ S + V+++G G+LGH+
Sbjct: 314 NHTLILDSQKRVFSWGFGGYGRLGHT 339
>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
guttata]
Length = 537
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 8/179 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L++L I + H V ++DG V++ G
Sbjct: 47 DEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWG 106
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
H +LG G+ + ++P ++ K V + HS+ L + G ++ G N+
Sbjct: 107 HNGYSQLGNGTTNQGITPVQVCTNLLIKK--VVEVACGSHHSMALSMDGDLYAWGYNNCG 164
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP S+ + ++G+ CG+ S+ V ++ EVY +G + GQLG
Sbjct: 165 QVGSGSTANQ---PTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLG 220
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 207 EVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGAN 266
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDH-SVFLMLSGSVFVCG 142
G+LG G++S+ +SP ++ EK++ V +A+ H S SG V++ G
Sbjct: 267 TYGQLGTGNKSNQLSPVQIMMEKERV---VEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELL-DSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++Y WG N +G+GS + P + + L+ + + + S+ V ++G V+ G+
Sbjct: 154 DLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGY 213
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V + H++ L G ++ G N++ Q
Sbjct: 214 NGNGQLGLGNNGNQLTPCRV---AALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQ 270
Query: 149 LGLSPPPSHIVSPTPI 164
LG + S+ +SP I
Sbjct: 271 LG-TGNKSNQLSPVQI 285
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++++ V+ G LG G S + PKKL E
Sbjct: 18 LLSPQEIASIRKACVFGTSANEAIYITHSDEVFVFGLNCSNCLGTGDNQSTIVPKKL--E 75
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
K +++ S H V G V+ G N + QLG I TP+ +
Sbjct: 76 ALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGI---TPVQVCTNLL 132
Query: 172 SQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ ++ V CG HS+ S ++Y +G + GQ+G
Sbjct: 133 IKKVVEVACGSHHSMALSMDGDLYAWGYNNCGQVG 167
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 128 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 187
Query: 89 GQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G++G GS ++ P+++ ++K + +A + S+ ++ +G V+V G N
Sbjct: 188 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMC---SMAVVDTGEVYVWGYNGNG 244
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
QLGL + PTP ++L+ + + V CG H++V + ++Y +G ++ GQLG
Sbjct: 245 QLGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGT 300
Query: 206 ---------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 301 GNKSNQSYPTPVVVEKDRIIE 321
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+E+++ GTN + LG G Q+ P LDSL I + H V + DG V++ G
Sbjct: 74 DEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWG 133
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + + P ++ +K + VA S HS+ L G VF G N+
Sbjct: 134 HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYNNS 190
Query: 147 HQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
Q+G S + PIPR + ++ ++ + CG+ S+ V + EVY +G + GQ
Sbjct: 191 GQVG-----SGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQ 245
Query: 203 LG 204
LG
Sbjct: 246 LG 247
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 20/151 (13%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LG+G S + P++L+ G
Sbjct: 54 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLD-----SLTG 106
Query: 119 VAMASISQD---HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
+AS+S H V G VF G N++ QLG + +H + P I S+ S++ +
Sbjct: 107 KKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQV 163
Query: 176 IGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
I V CG +HS+V +S EV+ +G ++GQ+G
Sbjct: 164 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 194
>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
Length = 833
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+EVY+WG+N+++ L GSQ+ P+L S A+ + + ++ + V DG V +CG
Sbjct: 377 SEVYVWGSNSSHQLAEGSQEKILQPKL--SPAFANAQTIEAGQYCTFVVYSDGTVRACGK 434
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G GRLGLG ++ + KKLNF+ ++ + S H++ L G VF G + +
Sbjct: 435 GSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDGHTLALTADGEVFSWGDGDYGK 494
Query: 149 LG 150
LG
Sbjct: 495 LG 496
>gi|209154482|gb|ACI33473.1| RCC2 homolog [Salmo salar]
Length = 496
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G + +PK + E D++ VA A+ ++H++ L
Sbjct: 135 HSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLI--EALADEVVVA-AACGRNHTLAL 191
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSR 191
G+ + G N QLG ++SP I + QPL+ V CG F VV
Sbjct: 192 TEGGTAYSFGENKLGQLGQGNQTDAVLSPALIQY----NGQPLVKVACGAEFSMVVDCKG 247
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 248 NLYSFGCPEYGQLGHN 263
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 89/206 (43%), Gaps = 39/206 (18%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P+L+++L + + H++ +++ G +S G
Sbjct: 144 KLWSWGRNEKGQLGHGDTKRLEAPKLIEALADEVVVAAACGRNHTLALTEGGTAYSFGEN 203
Query: 90 QGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LG G+++ +V+SP + + + + + S+ + G+++ G + Q
Sbjct: 204 KLGQLGQGNQTDAVLSPALIQYNGQP----LVKVACGAEFSMVVDCKGNLYSFGCPEYGQ 259
Query: 149 LGLSPPPSHIVSP--------------------------TPIPRSSLKSSQPLIGVCCGR 182
LG + I TP+P ++ V CG
Sbjct: 260 LGHNSDGKFIARAQRIEFDCETIARRVTIFIEKSKDGQVTPVPNVVVRD------VACGG 313
Query: 183 FHSVVYSS-REVYTFGIHA-GQLGHS 206
H+++ S + V+++G G+LGH+
Sbjct: 314 NHTLILDSQKRVFSWGFGGYGRLGHT 339
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 95 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 154
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 155 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 213 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 269 NKSNQSYPTPVTVEKDRIIE 288
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 41 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATTEGEVFT 98
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 99 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 155
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQ
Sbjct: 156 NSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 212
Query: 203 LG 204
LG
Sbjct: 213 LG 214
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 21 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI-- 76
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 77 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 133
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 134 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 186
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G++G GS ++ P+++ ++K + +A + S+ ++ +G V+V G N
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMC---SMAVVDTGEVYVWGYNGNG 235
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
QLGL + PTP ++L+ + + V CG H++V + ++Y +G ++ GQLG
Sbjct: 236 QLGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGT 291
Query: 206 ---------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 292 GNKSNQSYPTPVVVEKDRIIE 312
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+E+++ GTN + LG G Q+ P LDSL I + H V + DG V++ G
Sbjct: 65 DEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWG 124
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + + P ++ +K + VA S HS+ L G VF G N+
Sbjct: 125 HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYNNS 181
Query: 147 HQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
Q+G S + PIPR + ++ ++ + CG+ S+ V + EVY +G + GQ
Sbjct: 182 GQVG-----SGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQ 236
Query: 203 LG 204
LG
Sbjct: 237 LG 238
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 13/135 (9%)
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD---HSVF 131
++ + + ++ G G LG+G S + P++L+ G +AS+S H V
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLD-----SLTGKKIASLSYGSGPHIVL 113
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR 191
G VF G N++ QLG + +H + P I S+ S++ +I V CG +HS+V +S
Sbjct: 114 ATTDGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEVACGSYHSLVLTSD 170
Query: 192 -EVYTFGI-HAGQLG 204
EV+ +G ++GQ+G
Sbjct: 171 GEVFAWGYNNSGQVG 185
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 2 TVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKR 61
T + R + + + ++ + V+ G+N+ LG G+ R P + L R
Sbjct: 112 TPAQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLSR 171
Query: 62 ASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAM 121
A V H++ + DG VW+ G+ G+LG GS + +P ++ + GV
Sbjct: 172 A--VAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQ-----GVVA 224
Query: 122 ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
+ HS+ L G+V+ G N + QLG + + SPTP+P L ++ V G
Sbjct: 225 VAGGYMHSLALCADGTVWAWGFNDYGQLGNG---TTVHSPTPVPVPGLSQ---VVSVAAG 278
Query: 182 RFHSVVYSSR-EVYTFGIHA-GQLGHS 206
FHS+ + V+ +G + GQLG +
Sbjct: 279 GFHSLALCADGTVWAWGNNGFGQLGEA 305
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 21/219 (9%)
Query: 2 TVMDNEEMRPIDHLIRDRKIDVSSNQF------NEVYIWGTNANYNLGTGSQQTRDVPEL 55
T RP+ L R + + V+ WG N LG GS R P
Sbjct: 156 TTAARSAPRPVPGLSRAVAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQ 215
Query: 56 LDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKD 115
+ L+ + V HS+ + DG VW+ G G+LG G ++V SP +
Sbjct: 216 VPGLQ--GVVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNG--TTVHSPTPVPVPGLSQ 271
Query: 116 KLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
+ VA HS+ L G+V+ G N F QLG VS ++ + +
Sbjct: 272 VVSVAAGGF---HSLALCADGTVWAWGNNGFGQLG------EAVSTQRTKPGRVEGLREV 322
Query: 176 IGVCCGRFHSV-VYSSREVYTFG-IHAGQLGHSPVTVSS 212
+ V G +HS+ V + ++++G ++GQLG+ + S+
Sbjct: 323 VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSA 361
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG R P ++ L+ + V +HS+ V G +WS G+
Sbjct: 291 VWAWGNNGFGQLGEAVSTQRTKPGRVEGLRE--VVAVAGGFYHSLAVRAGGSLWSWGNNY 348
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSVFVCGLNSFHQ 148
G+LG GS SS P + LG A+ S++ HSV + G+V+ G N Q
Sbjct: 349 SGQLGNGSFSSSARPAPV------QGLG-AVTSVAAGGMHSVAVQADGTVWAWGRNEEGQ 401
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHS 206
LG P TP+ L+ + V G +HS+ V + ++ +G++ GQLG S
Sbjct: 402 LGHERAPERA---TPVRVPGLQGE---VAVAAGFYHSLSVQAGGSLWAWGLNDFGQLGDS 455
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++ WG N + LG GS + P + L ++ V HSV V DG VW+ G
Sbjct: 339 GSLWSWGNNYSGQLGNGSFSSSARPAPVQGL--GAVTSVAAGGMHSVAVQADGTVWAWGR 396
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LG +P ++ + + VA+A+ HS+ + GS++ GLN F Q
Sbjct: 397 NEEGQLGHERAPERATPVRVPGLQGE----VAVAA-GFYHSLSVQAGGSLWAWGLNDFGQ 451
Query: 149 LGLSPPPSHIVSPTPIP 165
LG S P + P P P
Sbjct: 452 LGDSEAP---LMPVPAP 465
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 15/196 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG G+ P + L + + V FHS+ + DG VW+ G+
Sbjct: 241 VWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQ--VVSVAAGGFHSLALCADGTVWAWGNNG 298
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG + P ++ E ++ + VA HS+ + GS++ G N QLG
Sbjct: 299 FGQLGEAVSTQRTKPGRV--EGLREVVAVAGGFY---HSLAVRAGGSLWSWGNNYSGQLG 353
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLGHSPV 208
S S P P L + + V G HSV V + V+ +G + GQLGH
Sbjct: 354 NG---SFSSSARPAPVQGLGA---VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERA 407
Query: 209 TVSSASVIEPKVQATI 224
+ V P +Q +
Sbjct: 408 PERATPVRVPGLQGEV 423
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
++ V +S+ + DG VW+CG G+LG G+ ++ +P+ + VA+A+
Sbjct: 122 VRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLSRA----VAVAA 177
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
H++ L G+V+ G N + QLG + +H +P +P Q ++ V G
Sbjct: 178 -GGSHALALCADGTVWAWGNNGYGQLG-NGSTAHRATPVQVP-----GLQGVVAVAGGYM 230
Query: 184 HSVVYSSR-EVYTFGIH-AGQLG-----HSPVTV 210
HS+ + V+ +G + GQLG HSP V
Sbjct: 231 HSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPV 264
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 241
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 242 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 297
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 298 NKSNQSYPTPVTVEKDRIIE 317
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 70 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATTEGEVFT 127
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 184
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQ
Sbjct: 185 NSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 241
Query: 203 LG 204
LG
Sbjct: 242 LG 243
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 50 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI-- 105
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 106 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 162
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 163 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 215
>gi|395821141|ref|XP_003783906.1| PREDICTED: protein RCC2 [Otolemur garnettii]
Length = 522
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + +A+ ++H++ L
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVLAACGRNHTLAL 217
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 273
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 274 NLYSFGCPEYGQLGHN 289
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 170 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVLAACGRNHTLALTETGSVFAFGEN 229
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 230 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 285
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 286 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 345
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 346 DSQKRVFSWGFGGYGRLGHA 365
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 241
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 242 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 297
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 298 NKSNQSYPTPVTVEKDRIIE 317
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 70 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATTEGEVFT 127
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 184
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQ
Sbjct: 185 NSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 241
Query: 203 LG 204
LG
Sbjct: 242 LG 243
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 50 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIAC 107
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 108 LSYG--SGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 162
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 163 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 215
>gi|410973279|ref|XP_003993081.1| PREDICTED: LOW QUALITY PROTEIN: secretion-regulating guanine
nucleotide exchange factor [Felis catus]
Length = 462
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Query: 17 RDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELL-DSLKRASIKQVCMDKFHSV 75
R+ + ++++ ++ WG N+ LG G ++ +P+ L D K ++++ HS
Sbjct: 3 REPRASEAAHEAAVLFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPECVRRITGGGGHSA 62
Query: 76 FVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG--VAMASISQDHSVFLM 133
V+D+G ++ CG + G+LGLG V L F + LG V + D ++ L
Sbjct: 63 IVTDEGGLFVCGLNKDGQLGLGHTEDV-----LYFTTCRSLLGCPVQQVACGWDFTIILT 117
Query: 134 LSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI 164
+G V CG NSF QLG+ P V P I
Sbjct: 118 ENGQVLSCGSNSFGQLGVPHGPRRCVVPQAI 148
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 22/204 (10%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS--LKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y+WG+N + L + + +P+ +++ + + V H V ++ GRV++ G
Sbjct: 232 ELYVWGSNKHGQLASLAA-FLPLPQKIEAHCFQNEKVTSVWSGWTHLVAQTETGRVFTWG 290
Query: 88 HGQGGRLGLGSESS-------------VVSPKKLNFEKDKDKLGVAMASISQDHSVFLML 134
G+LG ES P+K G A S +H+ ++
Sbjct: 291 RADYGQLGRKLESREGWKLQSHDSSLPCSGPQKSMPSCLHCLTGAAEVSCGSEHN-LAVI 349
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVY 194
G+ + G N H + ++I +P P+P SL+SS L+ V CG HS+
Sbjct: 350 GGTCYSWGWNE-HGMCGDGSEANIWAPKPVP--SLQSSLGLL-VGCGAGHSLALCQLPAL 405
Query: 195 -TFGIHAGQLGHSPVTVSSASVIE 217
G H G SP SA E
Sbjct: 406 PALGQHPKVTGPSPDAAESAKSQE 429
>gi|403340993|gb|EJY69790.1| hypothetical protein OXYTRI_09469 [Oxytricha trifallax]
Length = 1074
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 24 SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK--RASIKQVCMDKFHSVFVSDDG 81
S+NQ ++ WG N LG S D P L + IKQ+ HS+F++++
Sbjct: 194 SNNQEQSIFAWGCNREGQLGLSSLAEIDFPTKLKFFEDYNIRIKQISAGSSHSLFLTEES 253
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
+V++ G G+LG+G + + + P ++ DK + + S HS+FL +G V+
Sbjct: 254 QVYAVGSNSSGQLGIGQQINQAIQPIIIDTLVDKVIIQI---SAGDHHSLFLTSTGEVYC 310
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPI 164
CG N +QLG+ ++ +P I
Sbjct: 311 CGNNQLNQLGIMDAQTNQYTPLKI 334
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 72/136 (52%), Gaps = 12/136 (8%)
Query: 13 DHLIRDRKIDVSSN------QFNEVYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIK 65
D+ IR ++I S+ + ++VY G+N++ LG G Q + + P ++D+L I
Sbjct: 231 DYNIRIKQISAGSSHSLFLTEESQVYAVGSNSSGQLGIGQQINQAIQPIIIDTLVDKVII 290
Query: 66 QVCMDKFHSVFVSDDGRVWSCGHGQGGRLG-LGSESSVVSPKKL----NFEKDKDKLGVA 120
Q+ HS+F++ G V+ CG+ Q +LG + ++++ +P K+ N++ K +
Sbjct: 291 QISAGDHHSLFLTSTGEVYCCGNNQLNQLGIMDAQTNQYTPLKITALQNYKIVKIEAKQE 350
Query: 121 MASISQDHSVFLMLSG 136
A+IS +FL G
Sbjct: 351 SAAISNAGELFLWGKG 366
>gi|392340833|ref|XP_001072061.3| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
norvegicus]
gi|392348476|ref|XP_216557.6| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
norvegicus]
Length = 500
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + +A+ ++H++ L
Sbjct: 139 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE---AIVLAACGRNHTLAL 195
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 196 TDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKG 251
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 252 NLYSFGCPEYGQLGHN 267
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L+++L +I + H++ ++D G V++ G
Sbjct: 148 KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGEN 207
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 208 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMLMDCKGNLYSFGCPEYGQ 263
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 264 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 323
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 324 DSQKRVFSWGFGGYGRLGHA 343
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP ++ +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PVT+ +IE
Sbjct: 293 NKSNQSYPTPVTMEKDRIIE 312
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+E+++ GTN LG G Q+ P LDSL I + H V + +G V++ G
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWG 124
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + + P +++ +K + VA S HS+ L G VF G N+
Sbjct: 125 HNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYNNS 181
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQLG
Sbjct: 182 GQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 27/177 (15%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL- 117
I+Q C+ F S ++ + + ++ G G LGLG S + P++L D L
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRL------DSLS 96
Query: 118 GVAMASISQD---HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQP 174
G +AS+S H V G VF G N++ QLG + +H + P I S+ S++
Sbjct: 97 GKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCQI--STNLSNKQ 153
Query: 175 LIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
+I V CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 183
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 184 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 241
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 242 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 297
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 298 NKSNQSYPTPVTVEKDRIIE 317
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 70 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATTEGEVFT 127
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 184
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQ
Sbjct: 185 NSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 241
Query: 203 LG 204
LG
Sbjct: 242 LG 243
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 50 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIAC 107
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 108 LSYG--SGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 162
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 163 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 215
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 2 TVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKR 61
T + R + + + ++ + V+ G+N+ LG G+ R P + L R
Sbjct: 115 TPAQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLSR 174
Query: 62 ASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAM 121
A V H++ + DG VW+ G+ G+LG GS + +P ++ + GV
Sbjct: 175 A--VAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQ-----GVVA 227
Query: 122 ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
+ HS+ L G+V+ G N + QLG + + SPTP+P L ++ V G
Sbjct: 228 VAGGYMHSLALCADGTVWAWGFNDYGQLGNG---TTVHSPTPVPVPGLSQ---VVSVAAG 281
Query: 182 RFHSVVY-SSREVYTFGIHA-GQLGHS 206
FHS+ + V+ +G + GQLG +
Sbjct: 282 GFHSLALCADGTVWAWGNNGFGQLGEA 308
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 92/219 (42%), Gaps = 21/219 (9%)
Query: 2 TVMDNEEMRPIDHLIRDRKIDVSSNQF------NEVYIWGTNANYNLGTGSQQTRDVPEL 55
T RP+ L R + + V+ WG N LG GS R P
Sbjct: 159 TTAARSAPRPVPGLSRAVAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQ 218
Query: 56 LDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKD 115
+ L+ + V HS+ + DG VW+ G G+LG G ++V SP +
Sbjct: 219 VPGLQ--GVVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNG--TTVHSPTPVPVPGLSQ 274
Query: 116 KLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
+ VA HS+ L G+V+ G N F QLG VS ++ + +
Sbjct: 275 VVSVAAGGF---HSLALCADGTVWAWGNNGFGQLG------EAVSTQRTKPGRVEGLREV 325
Query: 176 IGVCCGRFHSV-VYSSREVYTFG-IHAGQLGHSPVTVSS 212
+ V G +HS+ V + ++++G ++GQLG+ + S+
Sbjct: 326 VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSA 364
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG R P ++ L+ + V +HS+ V G +WS G+
Sbjct: 294 VWAWGNNGFGQLGEAVSTQRTKPGRVEGLRE--VVAVAGGFYHSLAVRAGGSLWSWGNNY 351
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSVFVCGLNSFHQ 148
G+LG GS SS P + LG A+ S++ HSV + G+V+ G N Q
Sbjct: 352 SGQLGNGSFSSSARPAPV------QGLG-AVTSVAAGGMHSVAVQADGTVWAWGRNEEGQ 404
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHS 206
LG P TP+ L+ + V G +HS+ V + ++ +G++ GQLG S
Sbjct: 405 LGHERAPERA---TPVRVPGLQGE---VAVAAGFYHSLSVQAGGSLWAWGLNDFGQLGDS 458
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++ WG N + LG GS + P + L ++ V HSV V DG VW+ G
Sbjct: 342 GSLWSWGNNYSGQLGNGSFSSSARPAPVQGL--GAVTSVAAGGMHSVAVQADGTVWAWGR 399
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LG +P ++ + + VA+A+ HS+ + GS++ GLN F Q
Sbjct: 400 NEEGQLGHERAPERATPVRVPGLQGE----VAVAA-GFYHSLSVQAGGSLWAWGLNDFGQ 454
Query: 149 LGLSPPPSHIVSPTPIP 165
LG S P + P P P
Sbjct: 455 LGDSEAP---LMPVPAP 468
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 15/196 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG G+ P + L + + V FHS+ + DG VW+ G+
Sbjct: 244 VWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQ--VVSVAAGGFHSLALCADGTVWAWGNNG 301
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG + P ++ E ++ + VA HS+ + GS++ G N QLG
Sbjct: 302 FGQLGEAVSTQRTKPGRV--EGLREVVAVAGGFY---HSLAVRAGGSLWSWGNNYSGQLG 356
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLGHSPV 208
S S P P L + + V G HSV V + V+ +G + GQLGH
Sbjct: 357 NG---SFSSSARPAPVQGLGA---VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERA 410
Query: 209 TVSSASVIEPKVQATI 224
+ V P +Q +
Sbjct: 411 PERATPVRVPGLQGEV 426
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
++ V +S+ + DG VW+CG G+LG G+ ++ +P+ + VA+A+
Sbjct: 125 VRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLSRA----VAVAA 180
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
H++ L G+V+ G N + QLG + +H +P +P Q ++ V G
Sbjct: 181 -GGSHALALCADGTVWAWGNNGYGQLG-NGSTAHRATPVQVP-----GLQGVVAVAGGYM 233
Query: 184 HSVVY-SSREVYTFGIH-AGQLG-----HSPVTV 210
HS+ + V+ +G + GQLG HSP V
Sbjct: 234 HSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPV 267
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
stuttgartiensis]
Length = 1413
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG GS R P + L A + + H++ + DG VW+ GH +
Sbjct: 314 VWAWGDNEGGQLGDGSTTNRSTPVKVSGL--ADVIAIAGGYSHTIVLRSDGTVWTWGHNE 371
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GG+LG GS ++ +P +++ D +A+A H++ + G+++ G N + QLG
Sbjct: 372 GGQLGDGSTTNRSTPVQVSGLADV----IAIAG-GVYHTIAVKSDGTMWAWGYNWYGQLG 426
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHSPV 208
+ I S TP+ + L +I + G +H++ S V+T+G + GQLG +
Sbjct: 427 ---DGTTINSSTPVQVNGLTD---VIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSI 480
Query: 209 TVSS 212
T S
Sbjct: 481 TNRS 484
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG GS R +P + L + + + H++ + DG VW+ G +
Sbjct: 264 VWAWGDNEGGRLGDGSTTNRSIPVKVGGL--SDVIAIAGGNAHTIALKSDGTVWAWGDNE 321
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GG+LG GS ++ +P K++ D +A+A H++ L G+V+ G N QLG
Sbjct: 322 GGQLGDGSTTNRSTPVKVSGLADV----IAIAG-GYSHTIVLRSDGTVWTWGHNEGGQLG 376
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLGHSPV 208
S TP+ S L +I + G +H++ V S ++ +G + GQLG
Sbjct: 377 ---DGSTTNRSTPVQVSGLAD---VIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTT 430
Query: 209 TVSSASV 215
SS V
Sbjct: 431 INSSTPV 437
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 22/192 (11%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N V+ WG+N+ LG G+ R +P + L +I + H++ + DG VW+ G+
Sbjct: 1108 NTVWAWGSNSYGQLGDGTITNRSIPTPVTYL--TNIIAIAGGYVHTIALKSDGTVWAWGY 1165
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG GS ++ +P +++ D +A+A H+V L G+V+ G N + Q
Sbjct: 1166 NGYGQLGDGSTTNRSTPVQVSGLTDV----IAIAG-EYVHTVALKSDGTVWAWGYNGYGQ 1220
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGH- 205
LG S TP+ S L +I + G H++ S V+T+G ++GQLG
Sbjct: 1221 LG---DGSTTNRSTPVQVSGLTD---VIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDG 1274
Query: 206 ------SPVTVS 211
+PV VS
Sbjct: 1275 TTINRLTPVQVS 1286
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 15/187 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N + LG G+ R P + + + + +H++ + DG VW+ G
Sbjct: 662 VWTWGWNNSGQLGDGTTINRSTP--VQVIGLTDVIAIAGGDYHTIALKSDGTVWTWGFNY 719
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ ++ +P + + D + +A + HS+ L G+V+ G N + QLG
Sbjct: 720 YGQLGGGATTNRSTP--VQVKGLADIIAIAGGYV---HSIALKSDGTVWAWGYNGYGQLG 774
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLGHSPV 208
H+ TP+ S L +I + G H++ S V+ +G + GQLG
Sbjct: 775 DGSTTDHL---TPVQVSGLTD---IIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTT 828
Query: 209 TVSSASV 215
T SS V
Sbjct: 829 TNSSTPV 835
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 22/190 (11%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG GS R P + L + + + H+V + DG VW+ G+
Sbjct: 1160 VWAWGYNGYGQLGDGSTTNRSTPVQVSGL--TDVIAIAGEYVHTVALKSDGTVWAWGYNG 1217
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG GS ++ +P +++ D + +A + H++ L G+V+ G N+ QLG
Sbjct: 1218 YGQLGDGSTTNRSTPVQVS--GLTDVIAIAGGYV---HTIALKSDGTVWTWGWNNSGQLG 1272
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGH--- 205
+ I TP+ S L + I + G +H++ + S V+ +G ++ GQLG
Sbjct: 1273 ---DGTTINRLTPVQVSGLTDA---IAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTT 1326
Query: 206 ----SPVTVS 211
+PV VS
Sbjct: 1327 INRLTPVQVS 1336
Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 15/187 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG G+ R P + L A I + HS+ + DG VW+ G+
Sbjct: 712 VWTWGFNYYGQLGGGATTNRSTPVQVKGL--ADIIAIAGGYVHSIALKSDGTVWAWGYNG 769
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG GS + ++P +++ D + +A I H++ L G+V+ G N QLG
Sbjct: 770 YGQLGDGSTTDHLTPVQVS--GLTDIIAIAGGYI---HTIALKSDGTVWAWGHNEGGQLG 824
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPV 208
+ S TP+ S L +I V +H++ S V+T+G + GQLG
Sbjct: 825 DGTTTN---SSTPVQVSGLTD---VIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGST 878
Query: 209 TVSSASV 215
T S V
Sbjct: 879 TERSLPV 885
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 15/187 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N N LG S R P + L + + +H++ + DG VW+ G+ +
Sbjct: 164 VWTWGANWNGQLGDESTTNRSTPVQVSGL--TDVIAIAGGAYHTIALKSDGTVWAWGNNE 221
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GG+LG GS + +P +++ D + A H++ L G+V+ G N +LG
Sbjct: 222 GGQLGDGSTTDRSTPVQVSGLTDVIAIAGGYA-----HTIALKSDGTVWAWGDNEGGRLG 276
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLGHSPV 208
+ + P+ L +I + G H++ S V+ +G + GQLG
Sbjct: 277 DGSTTNRSI---PVKVGGLSD---VIAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGST 330
Query: 209 TVSSASV 215
T S V
Sbjct: 331 TNRSTPV 337
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 15/187 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG GS P + L I + H++ + DG VW+ GH +
Sbjct: 762 VWAWGYNGYGQLGDGSTTDHLTPVQVSGL--TDIIAIAGGYIHTIALKSDGTVWAWGHNE 819
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GG+LG G+ ++ +P +++ D V + H++ L G+V+ G N + QLG
Sbjct: 820 GGQLGDGTTTNSSTPVQVSGLTD-----VIAVTARLYHTIALKSDGTVWTWGRNIYGQLG 874
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPV 208
S P+ L +I + G +H++ S V+ +G + QLG+
Sbjct: 875 ---DGSTTERSLPVQVIGLTD---VIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWST 928
Query: 209 TVSSASV 215
SS V
Sbjct: 929 KNSSTPV 935
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ +G N N LG GS P + L A + +H++ + DG VW+ G
Sbjct: 612 VWAYGANWNSQLGDGSTTDSSTPVQVSGLTDAI--AIAGGVYHTIALKSDGTVWTWGWNN 669
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ + +P ++ D +A+A H++ L G+V+ G N + QLG
Sbjct: 670 SGQLGDGTTINRSTPVQVIGLTDV----IAIAG-GDYHTIALKSDGTVWTWGFNYYGQLG 724
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPV 208
+ TP+ +K +I + G HS+ S V+ +G + GQLG
Sbjct: 725 GGATTNR---STPV---QVKGLADIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGST 778
Query: 209 T 209
T
Sbjct: 779 T 779
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 66 QVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS 125
Q+ +H++ + DG VW+CG G+LG G+ + +P +++ D +A+A
Sbjct: 1043 QISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGLTDV----IAIAG-G 1097
Query: 126 QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS 185
H++ L +V+ G NS+ QLG + + PTP+ + +I + G H+
Sbjct: 1098 DYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSI-PTPVTYLT-----NIIAIAGGYVHT 1151
Query: 186 VVYSSR-EVYTFGIHA-GQLGHSPVTVSSASV 215
+ S V+ +G + GQLG T S V
Sbjct: 1152 IALKSDGTVWAWGYNGYGQLGDGSTTNRSTPV 1183
Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N + LG G+ R P + L A + +H++ + D VW+ G
Sbjct: 1260 VWTWGWNNSGQLGDGTTINRLTPVQVSGLTDAI--AIAGGDYHTIALKSDNTVWAWGSNS 1317
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ + ++P +++ D +A+A H++ L +V+ G NS+ QLG
Sbjct: 1318 YGQLGDGTTINRLTPVQVSGLTD----AIAIAG-GDYHTIALKSDNTVWAWGSNSYGQLG 1372
Score = 45.1 bits (105), Expect = 0.037, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 66 QVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS 125
Q+ +H++ + DG VW+ G +LG GS + +P +++ D +A+A
Sbjct: 595 QISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTD----AIAIAG-G 649
Query: 126 QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS 185
H++ L G+V+ G N+ QLG + I TP+ L +I + G +H+
Sbjct: 650 VYHTIALKSDGTVWTWGWNNSGQLG---DGTTINRSTPVQVIGLTD---VIAIAGGDYHT 703
Query: 186 VVYSSR-EVYTFGI-HAGQLGHSPVTVSSASV 215
+ S V+T+G + GQLG T S V
Sbjct: 704 IALKSDGTVWTWGFNYYGQLGGGATTNRSTPV 735
Score = 39.3 bits (90), Expect = 1.7, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N V+ WG+N+ LG G+ R P + L A + +H++ + D VW+ G
Sbjct: 1308 NTVWAWGSNSYGQLGDGTTINRLTPVQVSGLTDAI--AIAGGDYHTIALKSDNTVWAWGS 1365
Query: 89 GQGGRLGLGSESSVVSPKK 107
G+LG S ++ ++P +
Sbjct: 1366 NSYGQLGDVSTANSLTPAQ 1384
Score = 37.4 bits (85), Expect = 7.5, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 66 QVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS 125
Q+ +H++ + DG VW+ G G+LG S ++ +P +++ D +A+A +
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLTDV----IAIAGGA 202
Query: 126 QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS 185
H++ L G+V+ G N QLG S TP+ S L +I + G H+
Sbjct: 203 Y-HTIALKSDGTVWAWGNNEGGQLG---DGSTTDRSTPVQVSGLTD---VIAIAGGYAHT 255
Query: 186 VVYSSR-EVYTFGIH-AGQLGHSPVTVSSASV 215
+ S V+ +G + G+LG T S V
Sbjct: 256 IALKSDGTVWAWGDNEGGRLGDGSTTNRSIPV 287
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 293 NKSNQSYPTPVTVEKDRIIE 312
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATTEGEVFT 122
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 179
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQ
Sbjct: 180 NSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 203 LG 204
LG
Sbjct: 237 LG 238
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI-- 100
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 101 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 157
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 293 NKSNQSYPTPVTVEKDRIIE 312
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATTEGEVFT 122
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 179
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQ
Sbjct: 180 NSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 203 LG 204
LG
Sbjct: 237 LG 238
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI-- 100
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 101 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 157
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Danio rerio]
gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
Length = 531
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 8/179 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EVY+ G N + LGTG Q+ P+ LD L + + H + V++DG +++ G
Sbjct: 41 DEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
H +LG G+ + VSP ++ + V S HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGVSPILVSTNLQGKR--VTEVSCGSHHSLALTHEGEVFAWGYNNCG 158
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP S+ ++ ++ + CG+ S+ V + EVY +G + GQLG
Sbjct: 159 QVGSGSTANQ---PTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLG 214
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P ++ + L+ I + + S+ V+D+G V+ G+
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P +L + L +A HS+ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYA---HSLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHAGQ 202
LG + + +P+ + K I C S + S +VY +G GQ
Sbjct: 265 LGTGNKSNQL---SPVQVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQCRGQ 316
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E+Y WG N LG G+ P L+ + L+ + +V HS+ ++ +G V++ G+
Sbjct: 95 ELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGY 154
Query: 89 GQGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G++G GS ++ +P+K+ N ++K + +A Q S+ + +G V+ G N
Sbjct: 155 NNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACG---QTSSMAVTDNGEVYGWGYNGNG 211
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
QLGL + + TP +L+ ++ + G HS+ + +Y +G + GQLG
Sbjct: 212 QLGLGNNGNQL---TPCRLIALQGF-CVLQIASGYAHSLALTDEGLLYAWGANTYGQLG 266
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + + +SI+Q C+ +++++ D V+ G LG G S ++PKKL+
Sbjct: 12 LLSAQELSSIRQACIFGASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCL 71
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
K KL ++++ S H + + G ++ G N + QLG + +PI S+
Sbjct: 72 SGK-KL-ISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGV---SPILVSTNLQ 126
Query: 172 SQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ + V CG HS+ + EV+ +G + GQ+G
Sbjct: 127 GKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVG 161
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 293 NKSNQSYPTPVTVEKDRIIE 312
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATTEGEVFT 122
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 179
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQ
Sbjct: 180 NSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 203 LG 204
LG
Sbjct: 237 LG 238
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI-- 100
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 101 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 157
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDG 81
V + + EVY WG NA LG G+ VP ++ +L + +V HS+ ++ DG
Sbjct: 88 VLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDG 147
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
V++ G+ G++G GS ++ P+++ ++K+ V +A Q S+ ++ +G V+V
Sbjct: 148 EVYTWGYNNSGQVGSGSTANQPIPRRVT-SCLQNKIVVNIAC-GQMCSMAVVENGEVYVW 205
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA 200
G N QLGL + PTP ++L+ + + V CG H++V + ++Y +G ++
Sbjct: 206 GYNGNGQLGLGSSGNQ---PTPCRIAALQGIR-VQRVACGYAHTLVLTDEGQIYAWGANS 261
Query: 201 -GQLG 204
GQLG
Sbjct: 262 YGQLG 266
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+EV++ G N + LGTG Q+ P LDSL K C+ H V +++G V++
Sbjct: 41 DEVFVLGMNCSGCLGTGDMQSTIEPRRLDSL--CGKKIACLSYGSGPHVVLATEEGEVYT 98
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEK-DKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + P +++ +K + VA S HS+ L G V+ G N
Sbjct: 99 WGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGS---HHSMVLTSDGEVYTWGYN 155
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR +S ++ ++ + CG+ S+ V + EVY +G +
Sbjct: 156 NSGQVG-----SGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGN 210
Query: 201 GQLG 204
GQLG
Sbjct: 211 GQLG 214
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG N N LG GS + P + +L+ +++V H++ ++D+G++++ G
Sbjct: 201 EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
G+LG G++S+ P + DKD++ A S S SG V++ G
Sbjct: 261 SYGQLGTGNKSNQSYPTTVVV--DKDRVIEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 25/176 (14%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ +++ V+ G G LG G S + P++L+ G
Sbjct: 21 IRQACV--FGSAGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLD-----SLCG 73
Query: 119 VAMASISQD---HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
+A +S H V G V+ G N++ QLG V P S+ ++ +
Sbjct: 74 KKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFV---PCQVSTNLVNKKV 130
Query: 176 IGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
I V CG HS+V +S EVYT+G ++GQ+G + P+ S ++ K+ I
Sbjct: 131 IEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNI 186
>gi|148681378|gb|EDL13325.1| regulator of chromosome condensation 2 [Mus musculus]
Length = 498
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + +A+ ++H++ L
Sbjct: 137 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE---AIVLAACGRNHTLAL 193
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 194 TDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKG 249
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 250 NLYSFGCPEYGQLGHN 265
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L+++L +I + H++ ++D G V++ G
Sbjct: 146 KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGEN 205
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 206 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMLMDCKGNLYSFGCPEYGQ 261
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 262 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 321
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 322 DSQKRVFSWGFGGYGRLGHA 341
>gi|350402535|ref|XP_003486520.1| PREDICTED: hypothetical protein LOC100745121 [Bombus impatiens]
Length = 1865
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 14/172 (8%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N VY WG++ LG G PEL+ SL + I ++HSV ++ DGRV++ G
Sbjct: 889 NGVYAWGSSQFGQLGLGKVLQCSTPELITSLAQEVIIDAVAGQYHSVALTADGRVFTWGW 948
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS--GSVFVCGLNSF 146
G G+LG G+ ++P + LG + I+ H+ L LS G V+ G N F
Sbjct: 949 GVHGQLGHGNTDKKMTPTLVT-----SLLGTVIRYITAGHAHTLALSTEGIVYAFGCNIF 1003
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFG 197
QLG+ S++ S P+ S S+ + + G FH++ S + ++Y +G
Sbjct: 1004 GQLGVG---SNVKSSVPMKVS---LSERITLITTGYFHNLAVSYTNKLYIWG 1049
>gi|354505309|ref|XP_003514713.1| PREDICTED: protein RCC2-like [Cricetulus griseus]
Length = 484
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + +A+ ++H++ L
Sbjct: 123 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE---AIVLAACGRNHTLAL 179
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 180 TDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKG 235
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 236 NLYSFGCPEYGQLGHN 251
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L+++L +I + H++ ++D G V++ G
Sbjct: 132 KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGEN 191
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 192 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMLMDCKGNLYSFGCPEYGQ 247
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L + V CG H++V
Sbjct: 248 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVFLHVACGANHTLVL 307
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 308 DSQKRVFSWGFGGYGRLGHA 327
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 20/237 (8%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S ++VY WG LG G+ P+ + +L+ IKQ+ H + V+ G V
Sbjct: 82 SEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVL 141
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
S G Q G+LGLG+ + P+ + FE + V M + +H+ + G ++ G
Sbjct: 142 SWGRNQNGQLGLGTTEDSLLPQTIQAFE----GISVKMIAAGAEHTAAVTEDGDIYGWGW 197
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
+ LGL V P SS++ + ++ V CG H++ V SS +YT+G G
Sbjct: 198 GRYGNLGLGDRNDRFV---PEKVSSVEGDKMVL-VACGWRHTITVSSSGSLYTYGWSKYG 253
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGW 258
QLGH ++ KV+A +++ I + G +H+ A TS G +G GW
Sbjct: 254 QLGHGDF---EDHLVPHKVEA--LKDSSTSQI---SGGWRHTM-ALTSDGKLYGWGW 301
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV WG N N LG G+ + +P+ + + + S+K + H+ V++DG ++ G G
Sbjct: 139 EVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWG 198
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G LGLG + P+K+ + E DK + + + H++ + SGS++ G + + Q
Sbjct: 199 RYGNLGLGDRNDRFVPEKVSSVEGDK----MVLVACGWRHTITVSSSGSLYTYGWSKYGQ 254
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
LG H+V P +LK S + G H++ +S ++Y +G + GQ+G
Sbjct: 255 LGHGDFEDHLV---PHKVEALKDSSTSQ-ISGGWRHTMALTSDGKLYGWGWNKFGQVG 308
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 7/160 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG NLG G + R VPE + S++ + V H++ VS G +++ G
Sbjct: 191 DIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWS 250
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG G + P K+ KD + S H++ L G ++ G N F Q+
Sbjct: 251 KYGQLGHGDFEDHLVPHKVEALKDSS---TSQISGGWRHTMALTSDGKLYGWGWNKFGQV 307
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS 189
G H SP + + Q + V CG H++ ++
Sbjct: 308 GAGDNADH-CSPAQV---NFPEEQKVAQVACGWRHTLAFT 343
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD 80
I VSS+ +Y +G + LG G + VP +++LK +S Q+ H++ ++ D
Sbjct: 236 ITVSSS--GSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSD 293
Query: 81 GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
G+++ G + G++G G + SP ++NF +++ VA
Sbjct: 294 GKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVA 333
>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Takifugu rubripes]
Length = 726
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 12/177 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++++G+N LG GS++T + P + +LK + V + H++ + G+V+S G
Sbjct: 57 LFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLLVACGRNHTLICTAQGKVFSSGGNS 116
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLG-VAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG + ++++ D LG V M + + S L SG +F+ G N+ Q+
Sbjct: 117 EGQLGLGDCEERTTFQRIHA---FDSLGPVKMLAAGSNTSAALTESGKLFMWGDNTEGQI 173
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
GL+ SH SP + P+ V CG +HS V + +YTFG +G+LG
Sbjct: 174 GLA-KESHAPSPQEV-----DVGGPISWVSCGYYHSAFVTADGALYTFGECDSGKLG 224
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 11/193 (5%)
Query: 7 EEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQ 66
+ + P+ L + + ++++WG N +G + P+ +D I
Sbjct: 138 DSLGPVKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLAKESHAPSPQEVDV--GGPISW 195
Query: 67 VCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ 126
V +HS FV+ DG +++ G G+LGL +E + ++ K V +
Sbjct: 196 VSCGYYHSAFVTADGALYTFGECDSGKLGLTTEQ--LPRHRVPQMVKSIKEPVTQVACGG 253
Query: 127 DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV-SPTPIPRSSLKSSQPLIGVCCGRFHS 185
H+V L +F GL F QLG + I S P P K + + V CG H+
Sbjct: 254 GHTVALTEE-RLFTFGLGQFGQLGHG---TFIFESRLPRPVEHFKKGR-VCQVACGENHT 308
Query: 186 VVYSSRE-VYTFG 197
V + +YTFG
Sbjct: 309 AVITDGGLLYTFG 321
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVA 120
+K C D+ H+ ++ +GR++ G G+LGLGS+ +V P K L EK V
Sbjct: 39 LKIACGDE-HTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEK------VL 91
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
+ + ++H++ G VF G NS QLGL
Sbjct: 92 LVACGRNHTLICTAQGKVFSSGGNSEGQLGL 122
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 30/49 (61%)
Query: 52 VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSES 100
+P ++ K+ + QV + H+ ++D G +++ G G+ G+LGLG E+
Sbjct: 286 LPRPVEHFKKGRVCQVACGENHTAVITDGGLLYTFGDGRHGKLGLGEEN 334
>gi|410908657|ref|XP_003967807.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Takifugu rubripes]
Length = 388
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 37 NANYNLGTGSQQTRDVPELLDS--LKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRL 94
N+ LG G + R VP L D+ LK +++ V H+ +++DG V+ CG G+L
Sbjct: 3 NSYGQLGHGGVEDRPVPGLCDAAALKDKAVRVVTGGGGHTAVITEDGEVFVCGQNHRGQL 62
Query: 95 GLGSESSVVSPKK-LNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
GLG + + + ++ L + V + D ++FL SG V CG N+F QLG+
Sbjct: 63 GLGHLTDISTLQRCLGLTQT-----VTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGIGQ 117
Query: 154 PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHAGQLGHSPVTVSS 212
P++ + SLK++ ++ V G HS+ V S VY +GI G + + T+S
Sbjct: 118 KPAYTADVQIV--ESLKAA--VVSVAAGLRHSLAVTDSGCVYQWGI--GLMSQAKRTLSP 171
Query: 213 ASVIEPKVQATIIREDLPGF 232
+ V P ++++ +PG
Sbjct: 172 SPV--PSHLSSVLPSLVPGL 189
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 88/181 (48%), Gaps = 19/181 (10%)
Query: 35 GTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG--- 89
G+NA LG G + T DV ++++SLK A++ V HS+ V+D G V+ G G
Sbjct: 106 GSNAFGQLGIGQKPAYTADV-QIVESLK-AAVVSVAAGLRHSLAVTDSGCVYQWGIGLMS 163
Query: 90 QGGRL----GLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
Q R + S S V P + K VA S+ H V L +G +F+ G N
Sbjct: 164 QAKRTLSPSPVPSHLSSVLPSLVPGLNQKMSRVVAAGSM---HCVCLTENGDLFLWGSNK 220
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQL 203
QL S P + SPTP+ R SL + ++ V G H V + + V+T+G + GQL
Sbjct: 221 HSQLLSSEP--FLSSPTPVER-SLLGGETVLRVWSGWTHIVAQTETGRVFTWGRGNYGQL 277
Query: 204 G 204
G
Sbjct: 278 G 278
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP ++ +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIA-CGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PVT+ +IE
Sbjct: 293 NKSNQSYPTPVTMEKDRIIE 312
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+E+++ GTN LG G Q+ P LDSL I + H V + +G V++ G
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWG 124
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + + P +++ +K + VA S HS+ L G VF G N+
Sbjct: 125 HNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYNNS 181
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQLG
Sbjct: 182 GQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIAS 102
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 103 LSYG--SGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCQI--STNLSNKQVIEV 157
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
Shintoku]
Length = 2619
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 8/173 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG A LGTGS R P +++ I + C HS+ + +G VWS G+G
Sbjct: 1148 VYSWGMGAYGVLGTGSVANRYNPVKVVFPSDNIFISKCCAGSRHSMALDKEGNVWSWGYG 1207
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLGS + +P N + D V S HS L G+V+ G +L
Sbjct: 1208 GNGRLGLGSTRNYYTP---NLIRIFDTYEVFQISCGDSHSACLDRFGTVYTWGCCRGGKL 1264
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHAG 201
GL S ++ P + SLK + +I + CG +++ S S ++Y +G G
Sbjct: 1265 GLGKIVSDVLEPAVV--ESLKGTH-IIQIACGTGNTLALSASGKIYQWGCTLG 1314
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 41/260 (15%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-------------HSVFV 77
++ WG N N LG G ++R +P+ + ++ C++ F H F+
Sbjct: 1496 LFTWGCNDNGQLGQGDLRSRVIPDHVPYIEN------CINVFAGVDNSGCICSSNHEDFM 1549
Query: 78 SDD-GRVWSCGHGQGGRLGLGSE--SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML 134
DD G +W G G+LGLG S+V++P+++ GV ++ HSV L
Sbjct: 1550 KDDYGTLWVFGSSSCGKLGLGEALTSTVMTPREIT-----TVTGVYKLALGTMHSVVLTH 1604
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREV 193
GS++ G + +LG ++ V TP+ K+ + VC G HS+ S E+
Sbjct: 1605 EGSLYSAGAGTGGRLGTGDTSNYFVF-TPV-----KTEVKFVDVCAGSSHSLAISVDNEL 1658
Query: 194 YTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETS-LGP 252
Y +G G+ + V+EP + I + + HS S
Sbjct: 1659 YGWG--EGKY----ICSDEKHVLEPTLMEVIPSPTGEAKVISAVAAGNHSLVLTNSGYVA 1712
Query: 253 EFGGGWTGKKGKRLRSKLEA 272
FG G+ G +L K A
Sbjct: 1713 AFGNNTYGQLGVQLSIKSSA 1732
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 14/197 (7%)
Query: 22 DVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
D + + ++++G+++ LG G T V + + ++ + HSV ++ +G
Sbjct: 1547 DFMKDDYGTLWVFGSSSCGKLGLGEALTSTVMTPREITTVTGVYKLALGTMHSVVLTHEG 1606
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
++S G G GGRLG G S+ F K ++ HS+ + + ++
Sbjct: 1607 SLYSAGAGTGGRLGTGDTSNY-----FVFTPVKTEVKFVDVCAGSSHSLAISVDNELYGW 1661
Query: 142 GLNSFHQLGLSPPPSHIVSPT---PIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI 198
G + + H++ PT IP S ++ + V G V+ +S V FG
Sbjct: 1662 GEGKY----ICSDEKHVLEPTLMEVIP-SPTGEAKVISAVAAGNHSLVLTNSGYVAAFGN 1716
Query: 199 HA-GQLGHSPVTVSSAS 214
+ GQLG SSA+
Sbjct: 1717 NTYGQLGVQLSIKSSAN 1733
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPE-----LLDSLKRASIKQVCMDKFHSVFVSDDGRVWS 85
VY WG N GTG T+D E +L + + I ++ HS+ ++ +G +++
Sbjct: 1443 VYTWGVNN----GTGYNSTKDQIESYSEPMLFNHFSSKISKIACGSNHSLAITVNGLLFT 1498
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS----ISQDHSVFLMLS-GSVFV 140
G G+LG G S V P + + ++ + + + S +H F+ G+++V
Sbjct: 1499 WGCNDNGQLGQGDLRSRVIPDHVPYIENCINVFAGVDNSGCICSSNHEDFMKDDYGTLWV 1558
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH 199
G +S +LGL + S PR + + + + G HSVV + +Y+ G
Sbjct: 1559 FGSSSCGKLGLGEA---LTSTVMTPR-EITTVTGVYKLALGTMHSVVLTHEGSLYSAGAG 1614
Query: 200 AG 201
G
Sbjct: 1615 TG 1616
>gi|209155120|gb|ACI33792.1| RCC2 homolog [Salmo salar]
Length = 569
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G + +PK + E D++ VA A+ ++H++ L
Sbjct: 208 HSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLI--EPLADEVVVA-AACGRNHTLAL 264
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSR 191
G+ + G N QLG ++SP I + QPL+ V CG F VV
Sbjct: 265 TEGGTAYSFGENKLGQLGQGNQTDAVLSPALIQY----NGQPLVKVACGAEFSMVVDCKG 320
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 321 NLYSFGCPEYGQLGHN 336
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 88/206 (42%), Gaps = 39/206 (18%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P+L++ L + + H++ +++ G +S G
Sbjct: 217 KLWSWGRNEKGQLGHGDTKRLEAPKLIEPLADEVVVAAACGRNHTLALTEGGTAYSFGEN 276
Query: 90 QGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LG G+++ +V+SP + + + + + S+ + G+++ G + Q
Sbjct: 277 KLGQLGQGNQTDAVLSPALIQYNGQP----LVKVACGAEFSMVVDCKGNLYSFGCPEYGQ 332
Query: 149 LGLSPPPSHIVSP--------------------------TPIPRSSLKSSQPLIGVCCGR 182
LG + I TP+P ++ V CG
Sbjct: 333 LGHNSDGKFIARAQRIEFDCETIARRVAIFIEKSKDGQVTPVPNVVVRD------VACGG 386
Query: 183 FHSVVY-SSREVYTFGIHA-GQLGHS 206
H+++ S + V+++G G+LGH+
Sbjct: 387 NHTLILDSQKRVFSWGFGGYGRLGHT 412
>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4647
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 17/183 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY+WG+N+++ L G+ + P+L A + + ++ + VS DG V +CG G
Sbjct: 372 VYVWGSNSSHQLAEGTLEKILQPKLAQGFSDAQMIEA--GQYCTFSVSADGAVKACGKGS 429
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLGLG ++ PKKL E + V+ + S H++ + G VF G + +LG
Sbjct: 430 YGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKLG 489
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIG---VCCG---RFHSVVYSSREVYTFGI-HAGQL 203
H S T ++ PL+G VC R + V + E+YT+G G+L
Sbjct: 490 ------HGNSATQKYPKIIQG--PLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRL 541
Query: 204 GHS 206
GHS
Sbjct: 542 GHS 544
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 39/230 (16%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + + P+ ++ L+ + Q+ HS V+ DG++++ G G
Sbjct: 3965 EVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSG 4024
Query: 90 QGGRLGLGSESSVVSPKKLN-----------------FEKDKDKLGVAMA---------S 123
GRLG S S+ + P+++ K+ ++ + A +
Sbjct: 4025 DSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIA 4084
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGL--SPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
+ +H + L +G V+ G N QLGL S P + T + +++ + G
Sbjct: 4085 VGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPILVTTLQGKNIRQ------ISAG 4138
Query: 182 RFHSVVY-----SSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIR 226
R HS + S+R GI G P ++ P+V T +R
Sbjct: 4139 RCHSSAWTTPALSTRASGCSGIQLGLPQSVPPQYNALKDCSPEVLNTRLR 4188
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+EVY+WG N + + + VP L SL + +QV + + V +G V + G
Sbjct: 3860 SEVYLWG-NGRHGQLADAGTSASVPTLAPSLSQT--QQVVCGQNCTFLVQANGTVLAVGE 3916
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G GRLG G+ + +P ++ + + + S HS+ L +G VF G + +
Sbjct: 3917 GSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYGK 3976
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGH 205
LG P L+ + ++ + CG HS VV + +++TFG +G+LG
Sbjct: 3977 LGHGNSERQ---RRPKQIEGLQGEE-VVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQ 4031
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDG 81
V + + EVY WG NA LG G+ VP ++ +L + +V HS+ ++ DG
Sbjct: 93 VLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDG 152
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
V++ G+ G++G GS ++ P+++ ++K+ V +A Q S+ ++ +G V+V
Sbjct: 153 EVYTWGYNNSGQVGSGSTANQPIPRRVT-SCLQNKIVVNIAC-GQMCSMAVVENGEVYVW 210
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA 200
G N QLGL + PTP ++L+ + + V CG H++V + ++Y +G ++
Sbjct: 211 GYNGNGQLGLGSSGNQ---PTPCRIAALQGIR-VQRVACGYAHTLVLTDEGQIYAWGANS 266
Query: 201 -GQLG 204
GQLG
Sbjct: 267 YGQLG 271
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+EV++ G N + LGTG Q+ P LDSL K C+ H V +++G V++
Sbjct: 46 DEVFVLGMNCSGCLGTGDMQSTIEPRRLDSL--CGKKIACLSYGSGPHVVLATEEGEVYT 103
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEK-DKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + P +++ +K + VA S HS+ L G V+ G N
Sbjct: 104 WGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGS---HHSMVLTSDGEVYTWGYN 160
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR +S ++ ++ + CG+ S+ V + EVY +G +
Sbjct: 161 NSGQVG-----SGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGN 215
Query: 201 GQLG 204
GQLG
Sbjct: 216 GQLG 219
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG N N LG GS + P + +L+ +++V H++ ++D+G++++ G
Sbjct: 206 EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGAN 265
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++S+ P + +KD+
Sbjct: 266 SYGQLGTGNKSNQSYPTTVVVDKDR 290
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 25/176 (14%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ +++ V+ G G LG G S + P++L+ G
Sbjct: 26 IRQACV--FGSAGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLD-----SLCG 78
Query: 119 VAMASISQD---HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
+A +S H V G V+ G N++ QLG V P S+ ++ +
Sbjct: 79 KKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFV---PCQVSTNLVNKKV 135
Query: 176 IGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
I V CG HS+V +S EVYT+G ++GQ+G + P+ S ++ K+ I
Sbjct: 136 IEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNI 191
>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
GTPase regulator, partial [Callithrix jacchus]
Length = 817
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 118/289 (40%), Gaps = 58/289 (20%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKL------GVAMASISQD--------------- 127
G+LGLG + +++F + K+ A++++D
Sbjct: 114 NDEGQLGLGDTEERTTFHRVSFFTSQHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIG 173
Query: 128 ---------------------------HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVS 160
HS F+ G +++ G + +LGL P+ ++S
Sbjct: 174 LPNILNACVPHQVTIGKPVSWISCGYYHSAFVTTDGELYIFGESENGKLGL---PNELLS 230
Query: 161 PTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLGHSPVTVSSASVIEPK 219
IP+ + + +I V CG HSVV + VYTFG+ GQLG + ++ EPK
Sbjct: 231 NHRIPQLVPEIPEKVIQVACGGEHSVVLTEDAVYTFGLGQFGQLGLGTLLFETS---EPK 287
Query: 220 VQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRS 268
V I + + N + + L FG G GK G L +
Sbjct: 288 VVENIGNKTISYISCGENHA---ALLTDNGLMYTFGDGRHGKLGLGLEN 333
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Query: 30 EVYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+YI+G + N LG ++ +P+L+ + I+ C + HSV +++D V++ G
Sbjct: 210 ELYIFGESENGKLGLPNELLSNHRIPQLVPEIPEKVIQVACGGE-HSVVLTEDA-VYTFG 267
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
GQ G+LGLG+ S K+ E +K ++ S ++H+ L +G ++ G
Sbjct: 268 LGQFGQLGLGTLLFETSEPKV-VENIGNKT-ISYISCGENHAALLTDNGLMYTFGDGRHG 325
Query: 148 QLGLSPPP-SHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
+LGL ++ +PT + + LK L V CG H VV+++
Sbjct: 326 KLGLGLENFTNQFTPT-LCCNFLKFVVKL--VACGGCHMVVFAA 366
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+S+V P K L EK V +A+
Sbjct: 42 CGDE-HSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N QLGL
Sbjct: 95 GRNHTLVSTEGGNVYATGGNDEGQLGL 121
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G++G GS ++ P+++ ++K + + S Q S+ ++ +G V+V G N
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNI---SCGQMCSMAVVDTGEVYVWGYNGNG 235
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
QLGL + PTP ++L+ + + V CG H++V + ++Y +G ++ GQLG
Sbjct: 236 QLGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGT 291
Query: 206 ---------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 292 GNKSNQSYPTPVVVEKDRIIE 312
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+E+++ GTN + LG G Q+ P LDSL I + H V + DG V++ G
Sbjct: 65 DEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWG 124
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + + P ++ +K + VA S HS+ L G VF G N+
Sbjct: 125 HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYNNS 181
Query: 147 HQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
Q+G S + PIPR + ++ ++ + CG+ S+ V + EVY +G + GQ
Sbjct: 182 GQVG-----SGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQ 236
Query: 203 LG 204
LG
Sbjct: 237 LG 238
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 20/151 (13%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LG+G S + P++L+ G
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLD-----SLTG 97
Query: 119 VAMASISQD---HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
+AS+S H V G VF G N++ QLG + +H + P I S+ S++ +
Sbjct: 98 KKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQV 154
Query: 176 IGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
I V CG +HS+V +S EV+ +G ++GQ+G
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
>gi|351711822|gb|EHB14741.1| Protein RCC2, partial [Heterocephalus glaber]
Length = 427
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + +A+ ++H++ L
Sbjct: 66 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVLATCGRNHTLAL 122
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 123 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 178
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 179 NLYSFGCPEYGQLGHN 194
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 75 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVLATCGRNHTLALTETGSVFAFGEN 134
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 135 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 190
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 191 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 250
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 251 DSQKRVFSWGFGGYGRLGHA 270
>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cricetulus griseus]
Length = 1136
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ +D G V++ G
Sbjct: 92 NKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHTLVSTDKGSVYAAGG 151
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++ F KD + S + S L G +F+ G NS Q
Sbjct: 152 NNEGQLGLGDTDDRDTFHQIGFFTPKD--NIKQLSAGANTSAALTEDGKLFMWGDNSEGQ 209
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL S++ P + +P+ + CG +HS V E+YTFG G+LG
Sbjct: 210 IGLK-NKSNVCIP-----HEVTVGKPISWISCGYYHSAFVTVDGELYTFGEPENGKLG 261
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 105/235 (44%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLK-RASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G RD + + +IKQ+ S +++DG+++ G
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNIKQLSAGANTSAALTEDGKLFMWGDN 205
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL ++S+V P ++ K ++ S HS F+ + G ++ G +L
Sbjct: 206 SEGQIGLKNKSNVCIPHEVTVGK-----PISWISCGYYHSAFVTVDGELYTFGEPENGKL 260
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ L + +I V CG H+VV + + VY FG+ GQ G +
Sbjct: 261 GL---PNQLLINHRSPQRVLGIPEKVIQVACGGGHTVVLTDKVVYAFGL--GQFGQLGLG 315
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKG 263
EPKV I + + +I + G H+ + L FG G GK G
Sbjct: 316 TFLFETSEPKVIERIKDQKI-SYI---SCGENHTALMTDIGLMYTFGDGRHGKLG 366
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+S++ P K L EK V +A+
Sbjct: 80 CGDE-HTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEK------VKLAAC 132
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ GSV+ G N+ QLGL
Sbjct: 133 GRNHTLVSTDKGSVYAAGGNNEGQLGL 159
>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
Length = 456
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 10/177 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFH-SVFVSDDGRVWSCGHG 89
V+ WG N LG +QTR +P + L RA K C +H + ++DDG +++ G G
Sbjct: 118 VFTWGGGKNGRLGHNDEQTRTIPCRITHLPRAH-KIFC--GYHITAAITDDG-LYTWGWG 173
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LG GS PKK+ F D L ++ + H + SG V+ G N F QL
Sbjct: 174 EHGQLGQGSLEDSYGPKKVIF--DDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQL 231
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHA-GQLGH 205
G+ + +P+ +SL R + V ++ ++T+G A GQ GH
Sbjct: 232 GIGRYNE--IYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGH 286
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 31 VYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+Y WG NY LG G++ PEL+ + +I+QV H++ + +DG + S G+
Sbjct: 12 LYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYN 71
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFH 147
Q G+LG G++ V SP L+ +D L + +++ + HS L ++G+VF G
Sbjct: 72 QYGQLGNGTK--VDSP--LDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNG 127
Query: 148 QLGLSPPPSHIV--SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLG 204
+LG + + + T +PR+ + CG + + +YT+G GQLG
Sbjct: 128 RLGHNDEQTRTIPCRITHLPRAH--------KIFCGYHITAAITDDGLYTWGWGEHGQLG 179
Query: 205 HSPV 208
+
Sbjct: 180 QGSL 183
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 30 EVYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+VY WG+N LG G + P LL SL + V HS V++ G +++ G
Sbjct: 219 DVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGC 278
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS--GSVFVCGLNSF 146
G G+ G G + P + + +GV + + H+ + LS ++V G NS+
Sbjct: 279 GAEGQCGHGDYNDCDMPFLV-----ESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSY 333
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE 192
QLG S PR S I + CG FH ++++ E
Sbjct: 334 GQLGDGSKSS-----CCTPRKLFFSIPGTIDITCGHFHCTLWTTLE 374
>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 663
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E+Y+WG + LG G + P LL + + + V +H+ FV+D G V++ G G
Sbjct: 159 ELYVWGGGSEGQLGLGDIDDKSTPTLLSTDNK--VISVACGYYHTAFVTDVGEVFTFGEG 216
Query: 90 QGGRLGLGSE-SSVVSPKKLNF-EKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
GG+LG G++ V+PKK+N EK K + H+V L G V+ G
Sbjct: 217 DGGKLGQGTDYGKAVAPKKVNIPEKAKS------VACGGSHTVVLTECGKVYTFGEGGNG 270
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
QLG + TP+ L + + G H+ + + + ++YTFG
Sbjct: 271 QLGHK--NKYFYCETPV---WLNFKHKVTQIAAGENHTALVTEKGQLYTFG 316
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 12/177 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ +G N LG + P + LK +K V + H++ ++ G +++ G
Sbjct: 57 LFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANG 116
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG+ S P K+ E + K A A DHSV L G ++V G S QLG
Sbjct: 117 DGQLGVEDIPSSNCPVKVECEPRQYKALAAGA----DHSVALTDDGELYVWGGGSEGQLG 172
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLGH 205
L + P + L + +I V CG +H+ V EV+TFG G+LG
Sbjct: 173 LGD-----IDDKSTP-TLLSTDNKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQ 223
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 67 VCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMAS 123
C D+ H+ V++ GR+++ G G+LG+ P KKL EK V + +
Sbjct: 42 ACGDE-HTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEK------VKVVA 94
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
+ H++ SG ++ G N QLG+ PS S P+ + + Q + G
Sbjct: 95 CGRIHTIVATESGCLYTFGANGDGQLGVEDIPS---SNCPV-KVECEPRQ-YKALAAGAD 149
Query: 184 HSVVYSSR-EVYTFGIHA-GQLG 204
HSV + E+Y +G + GQLG
Sbjct: 150 HSVALTDDGELYVWGGGSEGQLG 172
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 17/176 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LGTG Q R P + L ++ + +HS ++DDG V+ G G+
Sbjct: 218 LWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGE 277
Query: 91 GGRLGLG--SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
GRLG G +SS + P+K+N +D + S HSV L G +F G +
Sbjct: 278 HGRLGFGDNDKSSKMVPQKVNLLAGED---IVQLSCGGTHSVALTQDGRMFSFGRGDHGR 334
Query: 149 LGL-----SPPPSHIVSPTPIPRSSLKSSQPLIG------VCCGRFHSVVYSSREV 193
LG + P + + P P+ SL ++ G V CG H++ +V
Sbjct: 335 LGYGKKVTTGQPVEVPTDIPPPK-SLSGTEEAEGHWIAKLVACGGRHTLAIVEWKV 389
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 31 VYIWGTNANYNLG--------TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
Y WG N G TG RD+ + ++QV HSV ++ +G
Sbjct: 112 AYAWGGNEYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLVVRQVAAGGTHSVVLTREGH 171
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
VW+ G G + P ++ EK V + ++ H++ L G+++
Sbjct: 172 VWTWGQ----PWPPGDIKQISVPVRVQGLEK------VKLIAVGAFHNLALQEDGTLWAW 221
Query: 142 GLNSFHQLGL--SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
G N + QLG + P S PIP L S L+ + G +HS + EVY +G
Sbjct: 222 GNNEYGQLGTGDTQPRSQ-----PIPVQGL-SGLTLVDIAAGGWHSTALTDDGEVYGWG 274
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 15/173 (8%)
Query: 34 WGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGR 93
WG + LG G + ++ ++++L+ ++ V +S+ + DDG++++ G Q G
Sbjct: 10 WGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 94 LGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS 152
LG +E+ + P ++ K + + + A+I H + + G + G N + Q G
Sbjct: 70 LGHPAETKTENIPSQV---KALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEE 126
Query: 153 PPPSHIVSPT-----PIPRSSLKSSQPLI--GVCCGRFHSVVYSSR-EVYTFG 197
P T IP+ + + L+ V G HSVV + V+T+G
Sbjct: 127 PERKDDTGKTLRRDIVIPQ---RCAPKLVVRQVAAGGTHSVVLTREGHVWTWG 176
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 15/172 (8%)
Query: 52 VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
VP + L++ +K + + FH++ + +DG +W+ G+ + G+LG G P +
Sbjct: 189 VPVRVQGLEK--VKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPV--- 243
Query: 112 KDKDKLGVAMASISQD--HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS-S 168
+ G+ + I+ HS L G V+ G +LG + S +P+ +
Sbjct: 244 --QGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFG---DNDKSSKMVPQKVN 298
Query: 169 LKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHSPVTVSSASVIEP 218
L + + ++ + CG HSV + +++FG G+LG+ + V P
Sbjct: 299 LLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVEVP 350
>gi|198421655|ref|XP_002121487.1| PREDICTED: similar to hect domain and RLD 4 [Ciona intestinalis]
Length = 1029
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N N LG G R+VP LL +L+ S+K +C + H+ ++ DG V++ G Q
Sbjct: 200 VFCWGRNDNGQLGLGDCVDRNVPVLLKALRSLSVKYICAGELHTAALTLDGGVFTFGSNQ 259
Query: 91 GGRLGLGSES----SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G+LG GS V +P+K+ FE +++ +A +Q ++ +G+V+ G N+
Sbjct: 260 FGQLGHGSSGPEPLPVSTPRKI-FELMGNEV-TQIACGAQHTVCYVGKTGNVYTFGNNNH 317
Query: 147 HQLGLSP--PPSHIVSPTPIPRSSLKSS 172
QLG P P S V P P+ SS
Sbjct: 318 SQLGYIPKHPRSEFV-PHPLSSDMWTSS 344
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 95/234 (40%), Gaps = 62/234 (26%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY WG N LG P+ + SL I QV HS+F+ +G +WS G
Sbjct: 97 KVYGWGGNDKDQLGWTDGNCYPSPKKIKSLSN-KIVQVACGHSHSLFLGSNGALWSAGSN 155
Query: 90 QGGRLGLGSESS-----VVSPKKLNFEK-----------------------DKDKLGV-- 119
G+LG G +SS ++S K + F + D +LG+
Sbjct: 156 NYGQLGFGDKSSTELRPLISLKGIPFSQISAGFWHSFCVTHSGAVFCWGRNDNGQLGLGD 215
Query: 120 -----------AMASIS-------QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSP 161
A+ S+S + H+ L L G VF G N F QLG P
Sbjct: 216 CVDRNVPVLLKALRSLSVKYICAGELHTAALTLDGGVFTFGSNQFGQLGHGSS-----GP 270
Query: 162 TPIPRSSLKSSQPLIG-----VCCGRFHSVVYSSR--EVYTFGIHA-GQLGHSP 207
P+P S+ + L+G + CG H+V Y + VYTFG + QLG+ P
Sbjct: 271 EPLPVSTPRKIFELMGNEVTQIACGAQHTVCYVGKTGNVYTFGNNNHSQLGYIP 324
Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 39 NYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGS 98
N N+G + T+ + +L+ I + + H + + D G+V+ G +LG
Sbjct: 59 NDNIGHSAGSTK-----VSALETVHIVDIALGDSHILAIDDKGKVYGWGGNDKDQLGWTD 113
Query: 99 ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHI 158
+ SPKK+ +K + + HS+FL +G+++ G N++ QLG S
Sbjct: 114 GNCYPSPKKIKSLSNK----IVQVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSSTE 169
Query: 159 VSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLG 204
+ P SLK P + G +HS V S V+ +G + GQLG
Sbjct: 170 LRPL----ISLKGI-PFSQISAGFWHSFCVTHSGAVFCWGRNDNGQLG 212
>gi|344283459|ref|XP_003413489.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2-like [Loxodonta
africana]
Length = 523
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +PK + + + A+ ++H++ L
Sbjct: 162 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEV---IVSAACGRNHTLAL 218
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 219 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 274
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 275 NLYSFGCPEYGQLGHN 290
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P+L++ L I + H++ +++ G V++ G
Sbjct: 171 KLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 230
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 231 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 286
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 287 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 346
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 347 DSQKRVFSWGFGGYGRLGHA 366
>gi|365991377|ref|XP_003672517.1| hypothetical protein NDAI_0K00830 [Naumovozyma dairenensis CBS 421]
gi|343771293|emb|CCD27274.1| hypothetical protein NDAI_0K00830 [Naumovozyma dairenensis CBS 421]
Length = 1264
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 25/194 (12%)
Query: 35 GTNANYNLGTGSQQTR------DVPELL-------DSLKRASIK--QVCMDKFHSVFVSD 79
G+N + LGTG++ R D+ +++ S ++ SIK + M ++HS+F +
Sbjct: 164 GSNIHSQLGTGTKDNRKKFFQLDINQIIKNQGNTTSSHRKRSIKFKDIYMMRYHSIFTTT 223
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-V 138
+ ++ CG+ GRLG G+ + F + L + ++ DH L+ S V
Sbjct: 224 NNEIYVCGNAARGRLGNGTTTKDEITYSKIFHLNNTSL---ICLVTSDHHTLLLDDQSDV 280
Query: 139 FVCGLNSFHQLGLSP--PPSHIVSP--TPIP-RSSLKSSQPLIGVCCGRFHSVVYSSRE- 192
+ G N + QLG S P I+ PIP R S ++ ++ + C + HS S
Sbjct: 281 YSWGWNGYSQLGYSTKVPEETILENICAPIPKRISFLENKHIVKIACSKVHSCAVSKDNV 340
Query: 193 VYTFGIHAGQLGHS 206
VY +G++ GQ+G++
Sbjct: 341 VYIWGLNLGQMGNA 354
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 14 HLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKF 72
+++R I ++N NE+Y+ G A LG G+ ++ + L S+ +
Sbjct: 212 YMMRYHSIFTTTN--NEIYVCGNAARGRLGNGTTTKDEITYSKIFHLNNTSLICLVTSDH 269
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGS---ESSVVS------PKKLNFEKDKDKLGVAMAS 123
H++ + D V+S G +LG + E +++ PK+++F ++K + +A +
Sbjct: 270 HTLLLDDQSDVYSWGWNGYSQLGYSTKVPEETILENICAPIPKRISFLENKHIVKIACSK 329
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVS 160
+ HS + V++ GLN Q+G + PSH S
Sbjct: 330 V---HSCAVSKDNVVYIWGLN-LGQMG-NAKPSHPTS 361
>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
DW4/3-1]
gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
DW4/3-1]
Length = 860
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 19/189 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V++WG N LG G+ +R +P + L + V + +HS+ + +DG +W+ G+
Sbjct: 632 VWVWGNNDFGQLGDGTVTSRAMPVQVSGL--TGVTAVAVGVYHSLALRNDGTLWAWGYNN 689
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL- 149
G+LG G+ +P ++ GV + HS+ L G+V+ G NSF QL
Sbjct: 690 VGQLGNGTSGIQSTPAQV-----PGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLG 744
Query: 150 -GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLGHS 206
G + P S +PT +P + +I + G F++V + S R V+ +G AGQLG
Sbjct: 745 DGTTTPRS---TPTQVPGLT-----NVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDG 796
Query: 207 PVTVSSASV 215
VT + V
Sbjct: 797 TVTQKTTPV 805
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 25/201 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N+ LG G+ R P + L S+ + FHS+ + DDG VW+ G+
Sbjct: 273 VWAWGDNSAGQLGDGTTTERATP--VQVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNS 330
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMA------SISQDHSVFLMLSGSVFVCGLN 144
G+LG G+ ++ P + + VA + DHS+ L G+V+ G N
Sbjct: 331 SGQLGDGTTTA--RPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYN 388
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQ 202
Q G P + TP+ S L L+ G H+VV S V+ +G + +GQ
Sbjct: 389 LSRQFGDGMPATRT---TPVQVSELTGGTALVA---GDLHAVVLKSDGTVWAWGDNSSGQ 442
Query: 203 LGH-------SPVTVSSASVI 216
LG P+ VS + I
Sbjct: 443 LGEGVTPVRAKPMQVSGLAAI 463
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 27/202 (13%)
Query: 31 VYIWGTNANYNLGTGSQQTR----DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
V+ WG+NA LG G+ R VP L D I + HS+ + +DG VW
Sbjct: 532 VWTWGSNAYGQLGDGTAIDRATAAQVPGLTD------ITALAAGNHHSLALRNDGTVWVW 585
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSVFVCGLN 144
G G+LG G+ +S +P +++ AM ++ HSV + L+G+V+V G N
Sbjct: 586 GSNDFGQLGDGTVTSRKTPVQVSGLS-------AMRAVEAGPAHSVAVHLNGTVWVWGNN 638
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQ 202
F QLG S + P+ S L + V G +HS+ + + ++ +G + GQ
Sbjct: 639 DFGQLGDGTVTSRAM---PVQVSGLTG---VTAVAVGVYHSLALRNDGTLWAWGYNNVGQ 692
Query: 203 LGHSPVTVSSASVIEPKVQATI 224
LG+ + S P + I
Sbjct: 693 LGNGTSGIQSTPAQVPGLTGVI 714
Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N + LG G+ R P + L S+ V + HS+ + DG VW+ G
Sbjct: 165 VWAWGFNGSGQLGNGTATDRATPVQVPGL--TSVMAVAASEAHSLALRSDGTVWAWGDNG 222
Query: 91 GGRLGLGSESSVVSPKKL-------NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
G+LG G+++ +P ++ + VA+++ HS+ L G+V+ G
Sbjct: 223 YGQLGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISA----HSLALRSDGTVWAWGD 278
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AG 201
NS QLG TP+ L S + + G FHS+ + V+ +G + +G
Sbjct: 279 NSAGQLGDGTTTER---ATPVQVLGLTS---VTALAAGAFHSLALRDDGTVWAWGNNSSG 332
Query: 202 QLGHSPVTVSSASVIEPKVQATI 224
QLG T V P + + I
Sbjct: 333 QLGDGTTTARPTPVQVPGLTSVI 355
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N++ LG G R P + L A+I + HSV V DG +W+ G +
Sbjct: 432 VWAWGDNSSGQLGEGVTPVRAKPMQVSGL--AAITALATGDGHSVAVGSDGGIWAWGDNR 489
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS-----QDHSVFLMLSGSVFVCGLNS 145
G+LG+G ++ P + +ASIS HS+ L +GSV+ G N+
Sbjct: 490 RGQLGIGITATREIPVQ----------ATGLASISALAAGDSHSLALRGNGSVWTWGSNA 539
Query: 146 FHQLG 150
+ QLG
Sbjct: 540 YGQLG 544
Score = 40.0 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N+ LG G+ R P + L ++ + F++V + + VW G
Sbjct: 732 VWGWGANSFGQLGDGTTTPRSTPTQVPGL--TNVIALNAGAFYTVALRSERSVWEWGSKS 789
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ + +P +++ D L A H++ L +V+ G N Q+G
Sbjct: 790 AGQLGDGTVTQKTTPVQVSGLTDVTALAAGNA-----HALALRTDRTVWAWGGNQRGQIG 844
Query: 151 -----LSPPPSHIVSP 161
+ P P ++ P
Sbjct: 845 DGTASIMPAPVNVSFP 860
Score = 37.7 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H++ + DG VW+ G G+LG G+ + +P ++ V + S+ HS+ L
Sbjct: 155 HTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQV-----PGLTSVMAVAASEAHSLAL 209
Query: 133 MLSGSVFVCGLNSFHQLG 150
G+V+ G N + QLG
Sbjct: 210 RSDGTVWAWGDNGYGQLG 227
>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 859
Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 19/189 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V++WG N LG G+ +R +P + L + V + +HS+ + +DG +W+ G+
Sbjct: 631 VWVWGNNDFGQLGDGTVTSRAMPVQVSGL--TGVTAVAVGVYHSLALRNDGTLWAWGYNN 688
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL- 149
G+LG G+ +P ++ GV + HS+ L G+V+ G NSF QL
Sbjct: 689 VGQLGNGTSGIQSTPAQV-----PGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLG 743
Query: 150 -GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLGHS 206
G + P S +PT +P + +I + G F++V + S R V+ +G AGQLG
Sbjct: 744 DGTTTPRS---TPTQVPGLT-----NVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDG 795
Query: 207 PVTVSSASV 215
VT + V
Sbjct: 796 TVTQKTTPV 804
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 25/201 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N+ LG G+ R P + L S+ + FHS+ + DDG VW+ G+
Sbjct: 272 VWAWGDNSAGQLGDGTTTERATP--VQVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNS 329
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMA------SISQDHSVFLMLSGSVFVCGLN 144
G+LG G+ ++ P + + VA + DHS+ L G+V+ G N
Sbjct: 330 SGQLGDGTTTA--RPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYN 387
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQ 202
Q G P + TP+ S L L+ G H+VV S V+ +G + +GQ
Sbjct: 388 LSRQFGDGMPATRT---TPVQVSELTGGTALVA---GDLHAVVLKSDGTVWAWGDNSSGQ 441
Query: 203 LGH-------SPVTVSSASVI 216
LG P+ VS + I
Sbjct: 442 LGEGVTPVRAKPMQVSGLAAI 462
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 27/202 (13%)
Query: 31 VYIWGTNANYNLGTGSQQTR----DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
V+ WG+NA LG G+ R VP L D I + HS+ + +DG VW
Sbjct: 531 VWTWGSNAYGQLGDGTAIDRATAAQVPGLTD------ITALAAGNHHSLALRNDGTVWVW 584
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSVFVCGLN 144
G G+LG G+ +S +P +++ AM ++ HSV + L+G+V+V G N
Sbjct: 585 GSNDFGQLGDGTVTSRKTPVQVSGLS-------AMRAVEAGPAHSVAVHLNGTVWVWGNN 637
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQ 202
F QLG S + P+ S L + V G +HS+ + + ++ +G + GQ
Sbjct: 638 DFGQLGDGTVTSRAM---PVQVSGLTG---VTAVAVGVYHSLALRNDGTLWAWGYNNVGQ 691
Query: 203 LGHSPVTVSSASVIEPKVQATI 224
LG+ + S P + I
Sbjct: 692 LGNGTSGIQSTPAQVPGLTGVI 713
Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N + LG G+ R P + L S+ V + HS+ + DG VW+ G
Sbjct: 164 VWAWGFNGSGQLGNGTATDRATPVQVPGL--TSVMAVAASEAHSLALRSDGTVWAWGDNG 221
Query: 91 GGRLGLGSESSVVSPKKL-------NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
G+LG G+++ +P ++ + VA+++ HS+ L G+V+ G
Sbjct: 222 YGQLGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISA----HSLALRSDGTVWAWGD 277
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AG 201
NS QLG TP+ L S + + G FHS+ + V+ +G + +G
Sbjct: 278 NSAGQLGDGTTTER---ATPVQVLGLTS---VTALAAGAFHSLALRDDGTVWAWGNNSSG 331
Query: 202 QLGHSPVTVSSASVIEPKVQATI 224
QLG T V P + + I
Sbjct: 332 QLGDGTTTARPTPVQVPGLTSVI 354
Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N++ LG G R P + L A+I + HSV V DG +W+ G +
Sbjct: 431 VWAWGDNSSGQLGEGVTPVRAKPMQVSGL--AAITALATGDGHSVAVGSDGGIWAWGDNR 488
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS-----QDHSVFLMLSGSVFVCGLNS 145
G+LG+G ++ P + +ASIS HS+ L +GSV+ G N+
Sbjct: 489 RGQLGIGITATREIPVQ----------ATGLASISALAAGDSHSLALRGNGSVWTWGSNA 538
Query: 146 FHQLG 150
+ QLG
Sbjct: 539 YGQLG 543
Score = 40.0 bits (92), Expect = 1.0, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N+ LG G+ R P + L ++ + F++V + + VW G
Sbjct: 731 VWGWGANSFGQLGDGTTTPRSTPTQVPGL--TNVIALNAGAFYTVALRSERSVWEWGSKS 788
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ + +P +++ D L A H++ L +V+ G N Q+G
Sbjct: 789 AGQLGDGTVTQKTTPVQVSGLTDVTALAAGNA-----HALALRTDRTVWAWGGNQRGQIG 843
Query: 151 -----LSPPPSHIVSP 161
+ P P ++ P
Sbjct: 844 DGTASIMPAPVNVSFP 859
Score = 37.7 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H++ + DG VW+ G G+LG G+ + +P ++ V + S+ HS+ L
Sbjct: 154 HTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQV-----PGLTSVMAVAASEAHSLAL 208
Query: 133 MLSGSVFVCGLNSFHQLG 150
G+V+ G N + QLG
Sbjct: 209 RSDGTVWAWGDNGYGQLG 226
>gi|345306595|ref|XP_001506220.2| PREDICTED: protein RCC2-like [Ornithorhynchus anatinus]
Length = 426
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 35 GTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRL 94
G N LG G + + P+L++ L I + H++ ++D GR + G+L
Sbjct: 33 GRNEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTDLGR------NEKGQL 86
Query: 95 GLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPP 154
G G V +PK + ++ + A+ ++H++ L +GSVF G N QLGL
Sbjct: 87 GHGDTKRVEAPKLIEVLSNEV---IVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQ 143
Query: 155 PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHS 206
I SP I + + QP+ + CG S++ + +Y+FG GQLGH+
Sbjct: 144 TDAIPSPAQI----MYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHN 193
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 27/195 (13%)
Query: 35 GTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRL 94
G N LG G + + P+L++ L I + H++ +++ G V++ G + G+L
Sbjct: 79 GRNEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTETGSVFAFGENKMGQL 138
Query: 95 GLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
GLG+++ + SP ++ + + + + S+ + G+++ G + QLG +
Sbjct: 139 GLGNQTDAIPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNS 194
Query: 154 PPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY-SSRE 192
I I PR K Q L V CG H++V S +
Sbjct: 195 DGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKR 254
Query: 193 VYTFGIHA-GQLGHS 206
V+++G G+LGH+
Sbjct: 255 VFSWGFGGYGRLGHA 269
>gi|296483226|tpg|DAA25341.1| TPA: hect domain and RCC1-like domain 1 [Bos taurus]
Length = 532
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 G 150
G
Sbjct: 491 G 491
>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 918
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ T P + +LK +K + H++ ++ G+V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERSTFHLISFFTSQRK--IKQLSAGSNTSAALTEDGELFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL V+ +P+ + +P+ + CG +HS V + ++YTFG G+LG
Sbjct: 172 IGL-----ENVTNVCVPQ-QVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLG 223
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 10 RPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM 69
R I L + + E+++WG N+ +G + VP+ + K I +
Sbjct: 140 RKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGK--PISWISC 197
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVS--PKKLNFEKDKDKLGVAMASISQD 127
+HS FV+ +G++++ G + G+LGL ++ V P+ + K V +
Sbjct: 198 GYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK----VVQVACGGG 253
Query: 128 HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS-SLKSSQPLIGVCCGRFHSV 186
H+V L +V+ GL F QLGL + T +P++ Q + + CG H+
Sbjct: 254 HTVVLT-EKAVYTFGLGQFGQLGLGT----FLFETSVPKAIEHIKDQKISFIACGENHTA 308
Query: 187 VYSSREV-YTFGI-HAGQLG 204
+ + + YTFG G+LG
Sbjct: 309 LITDMGLMYTFGDGRHGKLG 328
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+S+V P K L EK V A+
Sbjct: 42 CGDE-HTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEK------VKFAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGL 121
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 31 VYIWGTNANYNLGTGSQQ-TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY +G LG G+ VP+ ++ +K I + + H+ ++D G +++ G G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Query: 90 QGGRLGLGSESSV 102
+ G+LGLG E+S
Sbjct: 323 RHGKLGLGLENST 335
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVW 84
S++ ++Y WG LG G+ P+ + +L+ I Q+ H + V+ G V
Sbjct: 92 SDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVH 151
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
S G Q G+LGLG+ + P+K+ FE + V M + +H+ + G ++ G
Sbjct: 152 SWGRNQNGQLGLGNTEDSLLPQKIQAFEGVR----VKMIAAGAEHTAAVTEDGDLYGWGW 207
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-G 201
+ LGL ++ P SS+ + Q ++ V CG H++ V SS +YT+G G
Sbjct: 208 GRYGNLGLGDRDDRLI---PEKVSSV-NGQKMVLVACGWRHTITVSSSGSIYTYGWSKYG 263
Query: 202 QLGHSPVTVSSASVIEPKVQA----TIIREDLPGFIF-----ESNR---GTKHSFTAETS 249
QLGH ++ K++A TI +E+ IF E R G + + A+
Sbjct: 264 QLGHGDF---EDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGK 320
Query: 250 LGPEFGGGWT 259
L +G GW
Sbjct: 321 L---YGWGWN 327
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y WG NLG G + R +PE + S+ + V H++ VS G +++ G
Sbjct: 201 DLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWS 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML--------------- 134
+ G+LG G + P KL KD +ISQ+ +V L+
Sbjct: 261 KYGQLGHGDFEDHLVPHKLEALKD--------TTISQEEAVELIFFFLGDEGFRVGGGIQ 312
Query: 135 -----SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS 189
G ++ G N F Q+G+ H SP + + + Q ++ V CG H++ +
Sbjct: 313 WALAADGKLYGWGWNKFGQVGVGDNEDH-CSPVQV---NFPNEQKVVQVACGWRHTLALT 368
Query: 190 -SREVYTFGI-HAGQLGHSPVT 209
++ V+++G +GQLGH +
Sbjct: 369 EAKNVFSWGRGTSGQLGHGEIV 390
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 20/145 (13%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD- 79
I VSS+ +Y +G + LG G + VP L++LK +I Q + F+ D
Sbjct: 246 ITVSSS--GSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDE 303
Query: 80 --------------DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS 125
DG+++ G + G++G+G SP ++NF ++ + VA
Sbjct: 304 GFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACG--- 360
Query: 126 QDHSVFLMLSGSVFVCGLNSFHQLG 150
H++ L + +VF G + QLG
Sbjct: 361 WRHTLALTEAKNVFSWGRGTSGQLG 385
>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
Length = 1302
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+Y G N LG G + R L+ + IKQ+ + S V++DG+++ G
Sbjct: 125 MYAAGGNGEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDN 184
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFH 147
G++GL ++ V P +++ +G ++SIS HS F+ G ++ G
Sbjct: 185 SEGQIGLADKTYVSVPCQVD-------VGKPISSISCGYYHSAFITGDGELYTFGEPENG 237
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLGH 205
+LGL P + + +P+ L + + V CG H+VV + VYTFG+ GQLGH
Sbjct: 238 KLGLLPEQ---LKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETGVYTFGLGQYGQLGH 293
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 12/191 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y++G+N LG GS+ T P + +LK K + H++ +++G +++ G
Sbjct: 73 LYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNHTLVYTENGNMYAAGGNG 132
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLG-VAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG + ++F ++ K+ +A S + S + G +FV G NS Q+
Sbjct: 133 EGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYT---SAAVTEDGQLFVWGDNSEGQI 189
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLGHSP 207
GL+ +++ P + +P+ + CG +HS + E+YTFG G+LG P
Sbjct: 190 GLA-DKTYVSVPCQV-----DVGKPISSISCGYYHSAFITGDGELYTFGEPENGKLGLLP 243
Query: 208 VTVSSASVIEP 218
+ ++ V +P
Sbjct: 244 EQLKNSRVPQP 254
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ +G+++ G G+LGLGS+++V P K L EK K +A
Sbjct: 59 CGDE-HTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTK------LAVC 111
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ +G+++ G N QLGL
Sbjct: 112 GRNHTLVYTENGNMYAAGGNGEGQLGL 138
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY +G LG G+ + VP+ + L++ I+ + + H+ ++++G +++ G G
Sbjct: 280 VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVIAENGLMFTFGDG 339
Query: 90 QGGRLGLGSES 100
+ G+LGLG E+
Sbjct: 340 RHGKLGLGEEN 350
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 102/233 (43%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG G+ P + +L IKQ+ H + V+ +G V S G
Sbjct: 88 EVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRN 147
Query: 90 QGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G+LGLG + P+K+ FE + + M + +H+ + G ++ G +
Sbjct: 148 QNGQLGLGDTEDSLVPQKIQAFEGIR----IKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHS 206
LGL +V R + + + V CG H++ V S +YT+G GQLGH
Sbjct: 204 LGLGDRNDRLVP----ERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG 259
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
+ ++ K++A I + + G +H+ A TS G +G GW
Sbjct: 260 DL---EDHLVPHKLEAL-----GNSVISQISGGWRHTM-ALTSDGKLYGWGWN 303
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+S + +Y +G + LG G + VP L++L + I Q+ H++ ++ DG+
Sbjct: 237 ISVSYSGALYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGK 296
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G+G+ SP ++ D+ V S H++ + +VF G
Sbjct: 297 LYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQK---VVQVSCGWRHTLAVTERNNVFAWG 353
Query: 143 LNSFHQLGL 151
+ QLG+
Sbjct: 354 RGTNGQLGI 362
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 31/195 (15%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HSV + V S G G+ G+LG G +SP +L+ D + V + DH+V
Sbjct: 26 HSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGA---DHTVAY 82
Query: 133 MLSG-SVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR 191
S V+ G F +LG TP+P +L + + + CG H + +
Sbjct: 83 SESRMEVYSWGWGDFGRLGHGNSSDLF---TPLPIKALHGIR-IKQIACGDSHCLAVTME 138
Query: 192 -EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNR------GTKHS 243
EV ++G + GQLG + + S++ K+QA FE R G +H+
Sbjct: 139 GEVQSWGRNQNGQLG---LGDTEDSLVPQKIQA-----------FEGIRIKMVAAGAEHT 184
Query: 244 FTAETSLGPEFGGGW 258
A T G +G GW
Sbjct: 185 -AAVTEDGDLYGWGW 198
>gi|293344078|ref|XP_001080802.2| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Rattus norvegicus]
gi|293355949|ref|XP_344892.4| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Rattus norvegicus]
gi|149055831|gb|EDM07262.1| similar to Gnefr protein (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 450
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELL-DSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++ WG N+ LG G ++ +P+ L D K IK V HSV V+D G ++ CG
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLN 76
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFH 147
+ G+LGLG V L F K LG + ++ D ++ L G V CG N+F
Sbjct: 77 KDGQLGLGHTEEV-----LRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFG 131
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG+ P V P I
Sbjct: 132 QLGVPHGPRKCVVPQAI 148
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 22/136 (16%)
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLG-VAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG + V+ P++L+ D K G + + HSV + G +FVCGLN QLG
Sbjct: 26 GQLGLGHKEDVLLPQQLS---DFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLNKDGQLG 82
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIG-----VCCGRFHSVVYSSR-EVYTFGIHA-GQL 203
L + R ++ +PL+G V CG +++ + + +V + G +A GQL
Sbjct: 83 LG-------HTEEVLRFTI--CKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133
Query: 204 G--HSPVTVSSASVIE 217
G H P IE
Sbjct: 134 GVPHGPRKCVVPQAIE 149
>gi|380012154|ref|XP_003690152.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like,
partial [Apis florea]
Length = 647
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASI----KQVCMDKFHSVFVSDDGRVWSC 86
V+ WG+N LG D+ L++ + I KQ+ +HS+F++++G V+ C
Sbjct: 155 VFAWGSNLEGQLGLP-----DISGLVNKPTKVHIPEPVKQINTGYYHSIFLTENGLVYVC 209
Query: 87 GHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G + G+LG+ S+ + PK++ V + H+V L +++ G NS
Sbjct: 210 GESESGKLGIDINFSTQIVPKQMQLPSP-----VIHVACGGHHTVILTEKDNLYCTGSNS 264
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFG 197
QLGL + + P +PR +LK ++ + + CG H+ + + S ++YT G
Sbjct: 265 SGQLGLGTNVTELHIPKLLPRGALK-NEKISHISCGESHTAILTESGKLYTCG 316
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
Q ++++G+N LG G + P + LK + V + H++ + ++++C
Sbjct: 42 QSGRLFVFGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVACGRAHTLICTVAEKIFAC 101
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASI--SQDHSVFLMLSGSVFVCGLN 144
G Q G+LG G + S D G + I HS+ L G+VF G N
Sbjct: 102 GSDQEGQLGRGISAIGDSASIPVLVYDSGPTGSKIVQIVAGSHHSLALTSDGNVFAWGSN 161
Query: 145 SFHQLGLSPPPSHIVSPTP--IPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFG-IHA 200
QLGL + PT IP +P+ + G +HS+ + VY G +
Sbjct: 162 LEGQLGLPDISGLVNKPTKVHIP-------EPVKQINTGYYHSIFLTENGLVYVCGESES 214
Query: 201 GQLGHSPVTVSSASVIEPK 219
G+LG + ++ ++ I PK
Sbjct: 215 GKLG---IDINFSTQIVPK 230
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTR-DVPELL--DSLKRASIKQVCMDKFHSVFVSDDGRVWS 85
+ +Y G+N++ LG G+ T +P+LL +LK I + + H+ +++ G++++
Sbjct: 255 DNLYCTGSNSSGQLGLGTNVTELHIPKLLPRGALKNEKISHISCGESHTAILTESGKLYT 314
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
CG G+ G+LGL + V +L F + +L ++ S H++ +
Sbjct: 315 CGDGRHGKLGLEENENNV--HELTFVQRYKELFISNISCGGCHTILI 359
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 27/205 (13%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS + GR++ G G+LGLG ++ + P K L EK V +
Sbjct: 32 CGDE-HSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVKVLKPEK------VTHVAC 84
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIP---RSSLKSSQPLIGVCCG 181
+ H++ ++ +F CG + QLG S I IP S + ++ + G
Sbjct: 85 GRAHTLICTVAEKIFACGSDQEGQLGRG--ISAIGDSASIPVLVYDSGPTGSKIVQIVAG 142
Query: 182 RFHSVVYSSR-EVYTFGIH-AGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRG 239
HS+ +S V+ +G + GQLG + S V +P + +P + + N G
Sbjct: 143 SHHSLALTSDGNVFAWGSNLEGQLGLPDI---SGLVNKP------TKVHIPEPVKQINTG 193
Query: 240 TKHS-FTAETSLGPEFGGGWTGKKG 263
HS F E L G +GK G
Sbjct: 194 YYHSIFLTENGLVYVCGESESGKLG 218
>gi|332105901|gb|AEE01409.1| HECT [Bubalus bubalis]
Length = 532
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 G 150
G
Sbjct: 491 G 491
>gi|417401058|gb|JAA47434.1| Putative alpha-tubulin suppressor [Desmodus rotundus]
Length = 445
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELL-DSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++ WG N+ LG G ++ P+ L D K I+++ HS V+D G ++ CG
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSPQQLNDFCKPMCIRRITGGGGHSAVVTDGGSLFVCGLN 76
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLG--VAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ GRLGLG V L F + LG V + D +V L SG V CG NSF
Sbjct: 77 KDGRLGLGHTEDV-----LCFTPCRSLLGCPVQQVACGWDFTVILTESGQVLSCGSNSFG 131
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
QLG+ P V P I K ++G+ G H++ ++ +
Sbjct: 132 QLGVPHGPRRSVVPQAIELLREK----VVGIAAGLRHALAATASGI 173
>gi|440633449|gb|ELR03368.1| hypothetical protein GMDG_06111 [Geomyces destructans 20631-21]
Length = 1559
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 43 GTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSES 100
G G ++ D+P L+ + + I+ + K HS ++ D ++ CG G GGRLGLG +
Sbjct: 289 GPGPKRIEDLPTLIRN-RPIIIQDAILSKLHSAILTTDPYSNLYMCGFGPGGRLGLGHDI 347
Query: 101 S---VVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG--LSPPP 155
+ V + E+ K V+ ++ Q+HS+ + G V G N+ LG L PP
Sbjct: 348 TSFNYVCVEGGALEEKK----VSAVALGQNHSLAVTSDGGVVSWGTNTCGTLGYTLPRPP 403
Query: 156 SHIVSPTPIPRSSLK--SSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLG 204
+ IPR + +IGV HSV +++ +YT+G + GQLG
Sbjct: 404 NDEEPINNIPRQIFGPLKKEFVIGVAASSIHSVAHTATSLYTWGKNEGQLG 454
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 18/207 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDG 81
V + + EVY WG NA LG G+ VP ++ +L + +V HS+ ++ DG
Sbjct: 129 VLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDG 188
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
V++ G+ G++G GS ++ P+++ ++K+ V +A Q S+ ++ +G V+V
Sbjct: 189 EVYTWGYNNSGQVGSGSTANQPIPRRVT-SCLQNKVVVNIAC-GQMCSMAVVENGEVYVW 246
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA 200
G N QLGL + PTP ++L+ + + V CG H++V + ++Y +G ++
Sbjct: 247 GYNGNGQLGLGSSGNQ---PTPCRIAALQGIR-VQRVACGCAHTLVLTDEGQIYAWGANS 302
Query: 201 -GQLGH---------SPVTVSSASVIE 217
GQLG + VTV VIE
Sbjct: 303 YGQLGTGNKSNQSYPTTVTVDKDRVIE 329
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+EV++ G N + LGTG Q+ P+ LDSL K C+ H V +++G V++
Sbjct: 82 DEVFVLGMNCSGCLGTGDVQSTIEPKRLDSL--CGKKIACLSYGSGPHVVLATEEGEVYT 139
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEK-DKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P +++ +K + VA S HS+ L G V+ G N
Sbjct: 140 WGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGS---HHSMVLTSDGEVYTWGYN 196
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR +S ++ ++ + CG+ S+ V + EVY +G +
Sbjct: 197 NSGQVG-----SGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGN 251
Query: 201 GQLG 204
GQLG
Sbjct: 252 GQLG 255
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG N N LG GS + P + +L+ +++V H++ ++D+G++++ G
Sbjct: 242 EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGAN 301
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
G+LG G++S+ P + DKD++ A S S SG V++ G
Sbjct: 302 SYGQLGTGNKSNQSYPTTVTV--DKDRVIEIAACHSAHTSAAKTQSGQVYMWG 352
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++V+++ V+ G G LG G S + PK+L+ G
Sbjct: 62 IRQACV--FGSAGNEVLYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLD-----SLCG 114
Query: 119 VAMASISQD---HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
+A +S H V G V+ G N++ QLG +V P S+ ++ +
Sbjct: 115 KKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLV---PCQVSTNLVNKKV 171
Query: 176 IGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
I V CG HS+V +S EVYT+G ++GQ+G + P+ S ++ KV I
Sbjct: 172 IEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNI 227
>gi|313226881|emb|CBY22026.1| unnamed protein product [Oikopleura dioica]
Length = 920
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 22/175 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ G N LG GS+ + P ++ L + ++ H + ++ DG V+S G G
Sbjct: 352 VFTCGNGENGCLGHGSEHKSSMFPNMVQDLISYDVVKISAGYKHVLALTSDGNVYSWGCG 411
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ GRLG G + S SPKK+ ++K K A D S F+ +SG+++VCG N +++
Sbjct: 412 ELGRLGHGGQGSEFSPKKITSLQEKIKEIYA----GYDSSFFIGISGNMYVCGSNRDNKI 467
Query: 150 GLSP--------------PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
GL PP TPI L S+Q + + R H+VV +S
Sbjct: 468 GLQKRSMLDIFRLGHSRIPP---YKDTPILSRQLNSNQTISKISQSRDHTVVLTS 519
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 11/186 (5%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
++ N++ +++ WG++++ LG T+ +P+++ SL I Q+ K HS+ ++++G
Sbjct: 97 LAFNEWGQLFGWGSDSHGQLGFNGT-TQPLPKIIKSLATFHIVQISCGKNHSLALTNNGE 155
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFV 140
++S G G+LGLG S L K LG+ +A I+ +HS L SG+++
Sbjct: 156 LYSWGGNYDGQLGLGMRSEYEKQPTL----IKSLLGIPIAFIACGSNHSFALSKSGAIYG 211
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-H 199
G N++ QLGL+ + + P +L+S + C F + + + V+T G
Sbjct: 212 WGKNTYGQLGLNDEENKL---HPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGM 268
Query: 200 AGQLGH 205
GQLGH
Sbjct: 269 YGQLGH 274
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG N LG ++ + P L +L+ +K + + S F+S DG V++CG G
Sbjct: 209 IYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGM 268
Query: 91 GGRLGLGSESSVVSPKKL 108
G+LG GS S+ + P+K+
Sbjct: 269 YGQLGHGSTSNEILPRKI 286
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLD-SLKRAS-IKQVCMDKFHSVFVSDDGRVWSCGH 88
+Y WG+ + LG G + + ++ + K AS + QV M + H+V ++ G V+SCG+
Sbjct: 1 MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+LG + + P+K+ + D + S +H++ G +F G +S Q
Sbjct: 61 NDLDQLGHKKQRT--KPEKV---EGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQ 115
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTF-GIHAGQLGHS 206
LG + P P SL + ++ + CG+ HS+ ++ E+Y++ G + GQLG
Sbjct: 116 LGFNG----TTQPLPKIIKSLATFH-IVQISCGKNHSLALTNNGELYSWGGNYDGQLGLG 170
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ E + Q T+I+ L I G+ HSF S G +G G
Sbjct: 171 MRS-------EYEKQPTLIKSLLGIPIAFIACGSNHSFALSKS-GAIYGWG 213
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 25/195 (12%)
Query: 83 VWSCGHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
++ G G LGLG + +P + F+ + V+ ++ ++H+V L SG VF
Sbjct: 1 MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASN---VSQVTMGENHTVMLTKSGEVFS 57
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH 199
CG N QLG H T + + + CG H++ ++ +++ +G
Sbjct: 58 CGNNDLDQLG------HKKQRTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSD 111
Query: 200 A-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEF--GG 256
+ GQLG + T +I K AT I + + G HS A T+ G + GG
Sbjct: 112 SHGQLGFNGTTQPLPKII--KSLATF-------HIVQISCGKNHSL-ALTNNGELYSWGG 161
Query: 257 GWTGKKGKRLRSKLE 271
+ G+ G +RS+ E
Sbjct: 162 NYDGQLGLGMRSEYE 176
>gi|417402521|gb|JAA48106.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 541
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 G 150
G
Sbjct: 491 G 491
>gi|431906266|gb|ELK10463.1| Protein RCC2, partial [Pteropus alecto]
Length = 427
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 66 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 122
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ V CG S++ +
Sbjct: 123 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKVACGAEFSMIMDCKG 178
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 179 NLYSFGCPEYGQLGHN 194
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 75 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 134
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 135 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKVACGAEFSMIMDCKGNLYSFGCPEYGQ 190
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 191 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 250
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 251 DSQKRVFSWGFGGYGRLGHA 270
>gi|74140640|dbj|BAB27358.3| unnamed protein product [Mus musculus]
Length = 576
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 30 EVYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V+ WG + LG G ++ +P + +L I QV +HS+ +S+DG V+S G
Sbjct: 21 KVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGR 80
Query: 89 GQGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG S S P+K+ K + + +A + HS L L+G+ F G N
Sbjct: 81 NSEGQLGLGKNSRSQAIPQKV---KSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSG 137
Query: 148 QLGLS--PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQL 203
QL LS I P I +LK + +I + CG H+ V + +V+TFG + +GQL
Sbjct: 138 QLALSGNKVKEQIYKPHSI--GALK-NLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 194
Query: 204 GHSP 207
SP
Sbjct: 195 QPSP 198
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 53/124 (42%), Gaps = 7/124 (5%)
Query: 67 VCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSV-VSPKKLNFEKDKDKLGVAMASIS 125
V K HSV V G+V++ G G G+LG+G + P K+ K + + S
Sbjct: 6 VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKI---KALAGIKIIQVSCG 62
Query: 126 QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS 185
HS+ L G VF G NS QLGL P + SL+ PL V G HS
Sbjct: 63 HYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKV--KSLEGI-PLAQVAAGGTHS 119
Query: 186 VVYS 189
S
Sbjct: 120 FALS 123
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
V + S ++HSV + G VF G S QLG+ PT I + +I V
Sbjct: 3 VDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA---LAGIKIIQV 59
Query: 179 CCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFES 236
CG +HS+ S V+++G ++ GQLG + S A I KV++ E +P + +
Sbjct: 60 SCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQA--IPQKVKSL---EGIP--LAQV 112
Query: 237 NRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKV 277
G HSF A + G F GW + +L VK+++
Sbjct: 113 AAGGTHSF-ALSLTGTSF--GWGSNRSGQLALSGNKVKEQI 150
>gi|307105877|gb|EFN54124.1| hypothetical protein CHLNCDRAFT_53105 [Chlorella variabilis]
Length = 1509
Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 69/218 (31%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 11 PIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD 70
P+D L + K + +V+ WG +NY LGTGS + P ++SL + +
Sbjct: 108 PLDLLSAELKEYIEPGGDGDVFSWGNGSNYTLGTGSTDVQLHPARVESLHDQQVAAISAA 167
Query: 71 KFHSVFVSDDGRVWSCGHGQGGRLG------LGSESSVVSPKKLNFEKDKDKLGVAMASI 124
KFHS VS DGR+ + G G+GGRLG E +V++P ++ + VA +
Sbjct: 168 KFHSAAVSVDGRLLTWGWGRGGRLGHPDAHIHSGEGAVIAPLVVS---SLGRRAVAAVAA 224
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFH 184
++ H+V +G VF G N QLG + V P PR Q ++ + H
Sbjct: 225 AKHHTVLCTTAGEVFTMGSNRHGQLG------YAVDSQPTPRRVTSLRQRVVALAAANKH 278
Query: 185 SV-VYSSREVYTFGIHA-GQLGHSPVTVSSASVIEPKV 220
SV V ++ +VYT+G + GQLG+ T S S P++
Sbjct: 279 SVAVTAAGDVYTWGSNVLGQLGYG--TSDSVSNAAPRL 314
>gi|156047721|ref|XP_001589828.1| hypothetical protein SS1G_09550 [Sclerotinia sclerotiorum 1980]
gi|154693945|gb|EDN93683.1| hypothetical protein SS1G_09550 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1563
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 98/239 (41%), Gaps = 79/239 (33%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPE-----------------LLDSL------------ 59
+E+Y +G+N N++LG G Q R PE LDS+
Sbjct: 237 DELYAFGSNKNFSLGFGDQDDRQYPEKITLKRPDHLLFRFYQEYLDSVYDHNPIGNPKMP 296
Query: 60 ------------KRASIKQVCMDKFHSVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSP 105
K I+ V + K S ++ D ++ CG G GGRLG+G E++
Sbjct: 297 KTVSELPSMIQNKPIIIQDVALSKLSSAVLTTDPESNLYMCGFGPGGRLGMGDETT---- 352
Query: 106 KKLNF-EKDKDKLG---VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSP 161
+ N+ D+ L V ++ Q+H++ + G +F G N++ QLG +
Sbjct: 353 -RFNYVPVDQGGLAGKKVVTVALGQNHTLAVSSEGEIFSWGTNTWGQLGYN--------- 402
Query: 162 TPIPRSSLKSSQPLIGVCCGRF----------------HSVVYSSREVYTFGIHAGQLG 204
+PR +LK +PL F HSV ++S ++ +G + GQLG
Sbjct: 403 --LPRPALKDEEPLCTTPRQIFGPLKREIIIGIAASAIHSVAHTSTSLFCWGKNEGQLG 459
>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 1001
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRA-SIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G RD + A +IKQ+ S +++DG+++ G
Sbjct: 108 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDN 167
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL +S+V P ++ K ++ S HS F+ + G ++ G +L
Sbjct: 168 SEGQIGLEDKSNVCIPHEVTVGK-----PISWISCGYYHSAFVTMDGELYTFGEPENGKL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL PS ++ P+ L + +I V CG H+VV + + VY FG+ GQ G +
Sbjct: 223 GL---PSELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKVVYAFGL--GQFGQLGLG 277
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKG 263
EPK+ I + I + G H+ E L FG G GK G
Sbjct: 278 TFLFETSEPKIIERIKDQK----ICHISCGENHTALMTELGLLYTFGDGRHGKLG 328
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ +D G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++ F D + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTDDRDTFHQIVFFTPADT--IKQLSAGANTSAALTEDGKLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL S++ P + +P+ + CG +HS V E+YTFG G+LG
Sbjct: 172 IGLE-DKSNVCIPHEV-----TVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLG 223
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+++++ P K L EK V +A+
Sbjct: 42 CGDE-HTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ +G V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTDTGGVYAAGGNNEGQLGL 121
>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
griseus]
gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
Length = 531
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 18 DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVF 76
+ I V+ N +EV+++G N + LGTG Q+ VP+ L++L IK + H +
Sbjct: 32 NEAIYVTDN--DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLL 89
Query: 77 VSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLS 135
++DG V++ GH +LG G+ + ++P ++ K + VA S HS+ L
Sbjct: 90 STEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGS---HHSMALAAD 146
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVY 194
G VF G N+ Q+G + PTP +S ++ ++ + CG+ S+ V S EVY
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQ---PTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVY 203
Query: 195 TFGIHA-GQLG 204
+G + GQLG
Sbjct: 204 GWGYNGNGQLG 214
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 18/199 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++G GS ++ +P+K+ + V + Q S+ ++ SG V+ G N QL
Sbjct: 156 NCGQVGSGSTANQPTPRKVTSCLHTKR--VVSIACGQTSSMAVLDSGEVYGWGYNGNGQL 213
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLGH-- 205
GL + + TP+ ++L+S + + CG H++ + +Y +G + GQLG
Sbjct: 214 GLGNNGNQL---TPVRVAALQSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269
Query: 206 -------SPVTVSSASVIE 217
+P+ V V+E
Sbjct: 270 KNNLLSPTPIMVEKERVVE 288
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L+ + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG GS+++++SP + EK++
Sbjct: 261 TYGQLGTGSKNNLLSPTPIMVEKER 285
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P + S L + + + S+ V D G V+ G+
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SPTPI
Sbjct: 265 LG-TGSKNNLLSPTPI 279
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+D+ V+ G LG G S + PKKL
Sbjct: 12 LLSPQETASIRKACVFGASANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKL--- 68
Query: 112 KDKDKLGVAMASISQDHSVFLMLS---GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
+ G + S+S ++LS G V+ G N + QLG + + ++P + +
Sbjct: 69 --EALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTTNQGIAPVQVCTNL 125
Query: 169 LKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
L + ++ V CG HS+ ++ EV+ +G + GQ+G
Sbjct: 126 LI--KQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG 161
>gi|115528070|gb|AAI24692.1| Sergef protein [Danio rerio]
Length = 423
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 12 IDHLIRDRKIDVSSNQFNE----VYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQ 66
+ H+I R + +Q ++ +Y WG N+ LG G+ + + P ++S L+ I+
Sbjct: 16 LRHVISWRLNLMEGDQLSKCVSLLYTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRA 75
Query: 67 VCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ 126
V HS +SD G + CG G+LGLG +++ + V S
Sbjct: 76 VTGGGGHSALISDSGELLVCGQNHKGQLGLGHTLEIMTFQTCPLPGFGR---VQQVSCGW 132
Query: 127 DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS-SQPLIGVCCGRFHS 185
D ++ L G V CG N+F QLG+S +H P LKS +P+ V G H+
Sbjct: 133 DFTIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLL-----LKSFHEPVTSVAAGLRHA 187
Query: 186 VV-YSSREVYTFG 197
+ +S VY +G
Sbjct: 188 LASTASGCVYQWG 200
>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 683
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ T P + +LK +K + H++ ++ G+V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERSTFHLISFFTSQRK--IKQLSAGSNTSAALTEDGELFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL V+ +P+ + +P+ + CG +HS V + ++YTFG G+LG
Sbjct: 172 IGL-----ENVTNVCVPQ-QVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLG 223
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 16/200 (8%)
Query: 10 RPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM 69
R I L + + E+++WG N+ +G + VP+ + K I +
Sbjct: 140 RKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGK--PISWISC 197
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVS--PKKLNFEKDKDKLGVAMASISQD 127
+HS FV+ +G++++ G + G+LGL ++ V P+ + K V +
Sbjct: 198 GYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK----VVQVACGGG 253
Query: 128 HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS-SLKSSQPLIGVCCGRFHSV 186
H+V L +V+ GL F QLGL + T +P++ Q + + CG H+
Sbjct: 254 HTVVLT-EKAVYTFGLGQFGQLGL----GTFLFETSVPKAIEHIKDQKISFIACGENHTA 308
Query: 187 VYSSREV-YTFGI-HAGQLG 204
+ + + YTFG G+LG
Sbjct: 309 LITDMGLMYTFGDGRHGKLG 328
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 50 RDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---K 106
DVP L C D+ H+ V+ + +++ G G+LGLGS+S+V P K
Sbjct: 34 NDVPTFLS----------CGDE-HTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVK 82
Query: 107 KLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
L EK V A+ ++H++ G V+ G N+ QLGL
Sbjct: 83 ALKPEK------VKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGL 121
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 31 VYIWGTNANYNLGTGSQQ-TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY +G LG G+ VP+ ++ +K I + + H+ ++D G +++ G G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Query: 90 QGGRLGLGSESSV 102
+ G+LGLG E+S
Sbjct: 323 RHGKLGLGLENST 335
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP ++ +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G G ++ P+++ ++K+ V +A Q S+ ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGPTANQPIPRRVT-GCLQNKVVVNIAC-GQMCSMAVVDTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGSGGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 293 NKSNQSYPTPVVVEKDRIIE 312
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN + LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 65 DEIFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKI--ACLSYGSGPHVVLATTEGEVFT 122
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P +++ +K + VA S HS+ L G VF G N
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 179
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G P + PIPR + ++ ++ + CG+ S+ V + EVY +G +
Sbjct: 180 NSGQVGSGPTANQ-----PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGN 234
Query: 201 GQLG 204
GQLG
Sbjct: 235 GQLG 238
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 10 RPIDHLIRDRKIDVSSNQFN--------EVYIWGTNANYNLGTGSQQ-TRDVPELLDSLK 60
+ I L+ + I +S F+ V+ WG N LG GSQ + P+L+ SLK
Sbjct: 129 KRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLK 188
Query: 61 RASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
+ QV + +S G V++ G G+LG +++ + K + +D LGVA
Sbjct: 189 GIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRD-LGVA 247
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCC 180
S ++H+ L G V+ G +++ QLG + T +P+ + S+ + V C
Sbjct: 248 YISCGEEHTAVLNKDGIVYTFGDDTYGQLG-----QQSGNQTSVPQKIEEYSRQVSQVAC 302
Query: 181 GRFHSVVY--SSREVYTFG 197
GR+H+++Y + + +FG
Sbjct: 303 GRYHTLLYVFTCNRIVSFG 321
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 13/181 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+Y WG + LGTG +++ P+ + L I Q+ FHSV +++DGRV+S G
Sbjct: 105 IYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQN 164
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LGLGS+ +++ K + + + + L +SG+VF G N+ QL
Sbjct: 165 KCGQLGLGSQ--IINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVC---CGRFHSVVYSSRE-VYTFGIHA-GQLG 204
G + P SL+ +GV CG H+ V + VYTFG GQLG
Sbjct: 223 GFKNDAKK-GTFKPYAVDSLRD----LGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLG 277
Query: 205 H 205
Sbjct: 278 Q 278
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 16/190 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDS---LKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+Y WG N L ++ ++V ++ K+ S+++V + + HS+++ DG + SCG
Sbjct: 1 MYCWGDNCFGQLAVLEEE-KEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCG 59
Query: 88 HGQGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G+LG G+ S + L + D S +HSV + G+++ G S
Sbjct: 60 QNPYGQLGRKGNNSRIEQISSLEAQTIVD------VSCGTNHSVAMCDEGNIYSWGDGSE 113
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
QLG S +P R + ++ +I + CG FHSV + V+++G + GQLG
Sbjct: 114 GQLGTGKFSSKNFTPK---RITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLG 170
Query: 205 HSPVTVSSAS 214
++ A+
Sbjct: 171 LGSQIINQAT 180
>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
Length = 516
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+++G N LG G + + P L SLK V K H++ ++ ++++ G
Sbjct: 57 VFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNS 116
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG+G P+ ++ + +K +A+++ HS FL GSV++ G NS Q G
Sbjct: 117 DGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCH-HSAFLTEEGSVYIWGDNSDGQCG 175
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG-IHAGQLGHS 206
+ +++++P I + P+ + CG +H+ S +VYTFG G+LG S
Sbjct: 176 I-KNENYLLNPRKI-----EFQNPINSISCGYYHTAFISLGKVYTFGEDDNGKLGRS 226
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELL--DSLKRASIKQVCMDKFHSVFVSDDGR 82
S + N+++ +G N++ LG G R VP+++ D K +I + HS F++++G
Sbjct: 103 STECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEEGS 162
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
V+ G G+ G+ +E+ +++P+K+ F+ + + H+ F+ L G V+ G
Sbjct: 163 VYIWGDNSDGQCGIKNENYLLNPRKIEFQNPINSISCGYY-----HTAFISL-GKVYTFG 216
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-A 200
+ +LG S P +P ++ + I V CG H+++ + S + Y FG + +
Sbjct: 217 EDDNGKLGRSDKL-----PNDVPE-GVELDENCISVKCGGSHTIILTESGKAYAFGSNFS 270
Query: 201 GQLG 204
GQLG
Sbjct: 271 GQLG 274
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 8/161 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY +G + N LG + DVPE ++ L I C H++ +++ G+ ++ G
Sbjct: 211 KVYTFGEDDNGKLGRSDKLPNDVPEGVE-LDENCISVKCGGS-HTIILTESGKAYAFGSN 268
Query: 90 QGGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ E+ P+++NF + + + + + HS FL G ++ CG +
Sbjct: 269 FSGQLGLGNFETEFSIPQRVNFT--DENVNLIYVTCGESHSAFLTDEGKLYTCGDGRNGK 326
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS 189
L ++I +PT I + S V CG H++V +
Sbjct: 327 LCNEDESTNICTPTTIE---MFKSFFCTYVSCGGCHTMVLA 364
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 6/165 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG NAN+ LG G++ P+++ +L+ ++ QV FH+ ++ DG+V + G+G
Sbjct: 264 QLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYG 323
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G+ + P + DK +A + + +G ++ G N +QL
Sbjct: 324 GNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPA---WTAAITENGDLYTWGKNRDYQL 380
Query: 150 GLSPPPSHIVSPTPI--PRS-SLKSSQPLIGVCCGRFHSVVYSSR 191
G+ + P + P++ K+ ++GV CG H V SR
Sbjct: 381 GIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSR 425
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 22 DVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
+++ + VY WG A LG GS + +P LL+ + I V H+ V++ G
Sbjct: 147 NIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTESG 206
Query: 82 RVWSCGHGQG-GRLGLGS-----ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
+++ G +G GRLG G+ E ++ P K+ + +A+ ++ L S
Sbjct: 207 ELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQ----ALDVPIALVYCGGFFTMALTKS 262
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVY 194
G ++ G N+ H+LG ++ P ++L+ L+ V CG FH+ + +V
Sbjct: 263 GQLWSWGGNANHELGHGTRANNW---KPKVVAALEDVT-LVQVACGGFHAAALTQDGKVI 318
Query: 195 TFGIHA-GQLGH 205
T+G GQLGH
Sbjct: 319 TWGYGGNGQLGH 330
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 95/218 (43%), Gaps = 37/218 (16%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIK------------------QVCMDK 71
EV+ WG + +G GS+ T +P L+ +LK A+ V
Sbjct: 36 EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95
Query: 72 FHSV-FVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
FHSV F D VW G G GGRLG+ +E + P + + K V MAS H++
Sbjct: 96 FHSVLFAEQDVFVW--GKGDGGRLGIDTEFNQYKP----YVNPRIKR-VQMASAGGLHNI 148
Query: 131 FLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR-SSLKSSQPLIGVCCGRFH-SVVY 188
L G+V+ G +F LG + +PR ++ V G H + V
Sbjct: 149 ALTEVGNVYTWGYGAFGALGHGSYEREL-----LPRLLEGPWKDRIVHVSAGGSHTAAVT 203
Query: 189 SSREVYTFGIHAGQ--LGH-SPVTVSSASVIEP-KVQA 222
S E+YT+G G+ LGH +P + ++ P KVQA
Sbjct: 204 ESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQA 241
>gi|21750989|dbj|BAC03879.1| unnamed protein product [Homo sapiens]
Length = 184
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 18/192 (9%)
Query: 58 SLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDK 116
+L I QV +HS+ +S D +V+S G G+LGLG E S SP+++ + +
Sbjct: 2 TLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRV---RSLEG 58
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
+ +A + HS L L G+ F G NS QL LS + S P+ +LK + ++
Sbjct: 59 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALK-NLGVV 117
Query: 177 GVCCGRFHSVVYSSR-EVYTFGIH-AGQLGHSPVTVSSASVIEPKVQATIIREDLPGFI- 233
+ CG H+ V + +V+TFG + +GQLG+SP P+ + + E + G +
Sbjct: 118 YISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPT---------PEKRGPQLVERIDGLVS 168
Query: 234 -FESNRGTKHSF 244
+ R +KH F
Sbjct: 169 QIDCGRNSKHGF 180
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Query: 29 NEVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
++V+ WG N++ LG G + ++ P+ + SL+ + QV HS +S G + G
Sbjct: 25 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 84
Query: 88 HGQGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G+L L G V S K L+ K+ LGV S H+ L G VF G N
Sbjct: 85 SNSAGQLALSGRNVPVQSNKPLSVGALKN-LGVVYISCGDAHTAVLTQDGKVFTFGDNRS 143
Query: 147 HQLGLSPPP 155
QLG SP P
Sbjct: 144 GQLGYSPTP 152
>gi|383861352|ref|XP_003706150.1| PREDICTED: uncharacterized protein LOC100881287 [Megachile rotundata]
Length = 1884
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 14/194 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N VY WG++ LG G PEL+ L + I ++HSV ++ DGRV++ G
Sbjct: 891 NGVYAWGSSRFGQLGLGKILQCSTPELITYLAQEVIIDAVAGQYHSVALTADGRVFTWGW 950
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS--GSVFVCGLNSF 146
G G+LG G+ + P + LG + IS H+ L LS G V+ G N F
Sbjct: 951 GVHGQLGHGNTDKKIVPTLIT-----SLLGTVIRYISAGHAHTLALSTEGIVYAFGCNIF 1005
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHAGQLGH 205
QLG+ S++ S PI + + + + G FH++ S + ++Y +G L
Sbjct: 1006 GQLGVG---SNVKSSVPI---KVLLPEKIFLITTGYFHNLAVSYTNKLYVWGASPQVLRL 1059
Query: 206 SPVTVSSASVIEPK 219
T A ++E +
Sbjct: 1060 QAQTQKRARILEQR 1073
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDS---LKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
VY WG++ LGTG R P S + + V H++ V+++G V++ G
Sbjct: 839 VYTWGSSVQGCLGTGPSVLRYGPPQAISFFKIMEVEVLSVSCGHCHTLAVTNNG-VYAWG 897
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+LGLG +P+ + + + + A Q HSV L G VF G
Sbjct: 898 SSRFGQLGLGKILQCSTPELITYLAQE---VIIDAVAGQYHSVALTADGRVFTWGWGVHG 954
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
QLG IV PT I +SL + + + G H++ S+ VY FG + GQLG
Sbjct: 955 QLGHGNTDKKIV-PTLI--TSLLGT-VIRYISAGHAHTLALSTEGIVYAFGCNIFGQLG 1009
>gi|440803156|gb|ELR24066.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 431
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 39/260 (15%)
Query: 24 SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
SS VY +G+ LG G+ D P L+D+L +++QV +FHS+ VS+ G V
Sbjct: 133 SSPSRTVVYAFGSGRYGKLGLGNLLDHDRPVLVDTLSGVNVRQVAAGQFHSLAVSERGEV 192
Query: 84 WSCGHGQGGRLGLGSE-----------------SSVVSPKKLNFEKDKDKLGVAMASISQ 126
++ G G+LGLG ++V P+++ + + VA +
Sbjct: 193 FAFGCDDTGQLGLGRGHGYNPYQLYETSLQARLANVTVPERIAALAGRHIVAVAAGT--- 249
Query: 127 DHSVFLMLSGSVFVCGLNSFHQ--LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFH 184
HS+FL G VF CG++ + + LG + P+ L S ++ + G H
Sbjct: 250 HHSLFLSREGHVFSCGMDKYGKGRLGYKVDQQDNIQKLPLMIECL-SQHRVVDISAGEAH 308
Query: 185 SVVYSSREV-YTFGIHA-GQLG--------HSPVTVSSASVIEPK---VQATIIREDLPG 231
S+V + V + FG + GQLG H P VS A EP ++ + + G
Sbjct: 309 SLVVTDAGVLFGFGSNVNGQLGLGMADTQSHLPTPVSVAG--EPASLGLEGVVSVKSSVG 366
Query: 232 FIFESNRGTKHSFTAETSLG 251
+ ++ G +HS A TS G
Sbjct: 367 QVVQAVAGQQHSL-AVTSCG 385
>gi|432098051|gb|ELK27938.1| Protein RCC2, partial [Myotis davidii]
Length = 427
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 66 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHET---IVSAACGRNHTLAL 122
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 123 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 178
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 179 NLYSFGCPEYGQLGHN 194
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L +I + H++ +++ G V++ G
Sbjct: 75 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHETIVSAACGRNHTLALTETGSVFAFGEN 134
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 135 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 190
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 191 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 250
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 251 DSQKRVFSWGFGGYGRLGHA 270
>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
familiaris]
gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 1003
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ T P + +LK +K + H++ ++ G+V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERSTFHLISFFTSQRK--IKQLSAGSNTSAALTEDGELFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL V+ +P+ + +P+ + CG +HS V + ++YTFG G+LG
Sbjct: 172 IGL-----ENVTNVCVPQ-QVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLG 223
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 24/204 (11%)
Query: 10 RPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM 69
R I L + + E+++WG N+ +G + VP+ + K I +
Sbjct: 140 RKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGK--PISWISC 197
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKL--NFEKDKDKLG----VAMAS 123
+HS FV+ +G++++ G + G+LGL P +L N + G V +
Sbjct: 198 GYYHSAFVTTEGQLYTFGEPECGKLGL--------PNQLLVNHRMPQPVPGIPGKVVQVA 249
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS-SLKSSQPLIGVCCGR 182
H+V L +V+ GL F QLGL + T +P++ Q + + CG
Sbjct: 250 CGGGHTVVLT-EKAVYTFGLGQFGQLGLGT----FLFETSVPKAIEHIKDQKISFIACGE 304
Query: 183 FHSVVYSSREV-YTFGI-HAGQLG 204
H+ + + + YTFG G+LG
Sbjct: 305 NHTALITDMGLMYTFGDGRHGKLG 328
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+S+V P K L EK V A+
Sbjct: 42 CGDE-HTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEK------VKFAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGL 121
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 31 VYIWGTNANYNLGTGSQQ-TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY +G LG G+ VP+ ++ +K I + + H+ ++D G +++ G G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Query: 90 QGGRLGLGSESSV 102
+ G+LGLG E+S
Sbjct: 323 RHGKLGLGLENST 335
>gi|350580250|ref|XP_003480771.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
isoform 2 [Sus scrofa]
Length = 379
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 17 RDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSV 75
R+ ++ ++ WG N+ LG G ++ +P+ L K +K++ HS
Sbjct: 3 REPSASEAAPPATALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSA 62
Query: 76 FVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLM 133
V+D G ++ CG + G+LGLG V L F K LG + ++ D ++ L
Sbjct: 63 IVTDQGSLFVCGLNKDGQLGLGHTEDV-----LYFTLCKSLLGCPIQQVACGWDFTIILT 117
Query: 134 LSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI 164
+G V CG NSF QLG+ P V P I
Sbjct: 118 KNGQVLSCGSNSFGQLGVPHGPRRCVVPQAI 148
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG LG G P+++D L+ I +VC S+ ++ G +W+ G G
Sbjct: 370 VWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGD 429
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
RLG G+E + PK+L + K + VA+ S+ H + + G V+ G N QLG
Sbjct: 430 SQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSM---HCLVMTEEGEVYGWGRNDQGQLG 486
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI 198
S + PT +P + + G+ CG S ++S ++ G+
Sbjct: 487 DSSFSTK-SDPTLMPL----DGKSISGIACGPAQSFCWTSTGHWSVGL 529
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 11/213 (5%)
Query: 10 RPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM 69
R + H++ + E++ WG LG GS + + P L+ SLK + +C
Sbjct: 295 RHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICC 354
Query: 70 D--KFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD 127
++ V+DDG VWS G G G+LG G +PK ++ + +D + V +
Sbjct: 355 GSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGA---Q 411
Query: 128 HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV 187
S+ L +G ++ G +LG HI P + L+ + ++ V G H +V
Sbjct: 412 FSLALTKTGHIWTWGKGDSQRLG-HGTEEHIRFPKQL--EGLRGKK-VVDVAVGSMHCLV 467
Query: 188 YSSR-EVYTFGIH-AGQLGHSPVTVSSASVIEP 218
+ EVY +G + GQLG S + S + P
Sbjct: 468 MTEEGEVYGWGRNDQGQLGDSSFSTKSDPTLMP 500
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASI--SQDHSV 130
H + ++ +G V+S G+G GGRLG G +S P + K +LG + I +S
Sbjct: 250 HYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGK-QLGRHVVHIVCGSTYSA 308
Query: 131 FLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
+ G +F G ++ +LG + TP SLK + +I +CCG
Sbjct: 309 AITADGELFTWGRGNYGRLGHGSSEDQL---TPTLVVSLKGRR-VIDICCG 355
>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
Length = 681
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRA-SIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G RD + A +IKQ+ S +++DG+++ G
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDN 205
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL +S+V P ++ K ++ S HS F+ + G ++ G +L
Sbjct: 206 SEGQIGLEDKSNVCIPHEVTVGKP-----ISWISCGYYHSAFVTMDGELYTFGEPENGKL 260
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ L + +I V CG H+VV + + VY FG+ GQ G +
Sbjct: 261 GL---PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKVVYAFGL--GQFGQLGLG 315
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKG 263
EPK+ I + I + G H+ E L FG G GK G
Sbjct: 316 TFLFETSEPKIIERIKDQK----ICHISCGENHTALMTELGLLYTFGDGRHGKLG 366
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ +D G V++ G
Sbjct: 92 NKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGG 151
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++ F D + S + S L G +F+ G NS Q
Sbjct: 152 NNEGQLGLGDTDDRDTFHQIVFFTPADT--IKQLSAGANTSAALTEDGKLFMWGDNSEGQ 209
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL S++ P + +P+ + CG +HS V E+YTFG G+LG
Sbjct: 210 IGLE-DKSNVCIP-----HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLG 261
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++++WG N+ +G + +P + K I + +HS FV+ DG +++ G
Sbjct: 198 KLFMWGDNSEGQIGLEDKSNVCIPHEVTVGK--PISWISCGYYHSAFVTMDGELYTFGEP 255
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLG----VAMASISQDHSVFLMLSGSVFVCGLNS 145
+ G+LGL +E +N + LG V + H+V L V+ GL
Sbjct: 256 ENGKLGLPNE------LLMNHRSPQRVLGIPERVIQVACGGGHTVVLT-EKVVYAFGLGQ 308
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFG 197
F QLGL P I R Q + + CG H+ + + +YTFG
Sbjct: 309 FGQLGLGTFLFETSEPKIIERI---KDQKICHISCGENHTALMTELGLLYTFG 358
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+++++ P K L EK V +A+
Sbjct: 80 CGDE-HTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK------VKLAAC 132
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ +G V+ G N+ QLGL
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGL 159
>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Takifugu rubripes]
Length = 3883
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 17/183 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY+WG+N+++ L G+ + +P+L A + + ++ + VS DG V +CG G
Sbjct: 383 VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDA--QTIEAGQYCTFSVSTDGSVKACGKGS 440
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLGLG ++ PKKL E ++ V+ + S H++ + + G VF G + +LG
Sbjct: 441 YGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKLG 500
Query: 151 -----LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQL 203
P I P S+ ++ G HS V E+YT+G G+L
Sbjct: 501 HGNSATQKYPKIIQGPL--------FSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRL 552
Query: 204 GHS 206
GHS
Sbjct: 553 GHS 555
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + + P+ +++L+ + Q+ HS V+ DG++++ G G
Sbjct: 3125 EVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSG 3184
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSG-SVFVCGLNSFHQ 148
+ GRLG S S+ + P+++ + V S +H++ L L G +V+ G + +
Sbjct: 3185 ESGRLGQRSTSNKMLPERV---AALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGK 3241
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSREVYTFG 197
LG + P + + K + VCCG +F VV VYTFG
Sbjct: 3242 LGAGSSTAKYY-PQKVEQLCNKGMKK---VCCGAQFSVVVACDGHVYTFG 3287
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG Q+R++P L+ + + + QV H++ V+ DGR VWS G
Sbjct: 540 ELYTWGEGDFGRLGHSDSQSRNMPTLVKDI--SGVGQVACGSSHTIAVAQDGRTVWSFGG 597
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + V S S S+ L +G VF G S
Sbjct: 598 GDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQS---SLALTSAGQVFAWGCGSC-- 652
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGH- 205
LG + + P + S+ +I + CG H + S EVY +G + GQ G
Sbjct: 653 LGCGSSETTSLRPRFVEDLSITK---IIDISCGDSHCLALSHENEVYAWGNNTMGQCGQG 709
Query: 206 ---SPVT 209
+P+T
Sbjct: 710 HTSTPIT 716
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++VY+WG N Y G+ VP L SL + +QV + S + +G V + G
Sbjct: 3020 SDVYLWG-NGRYGQLAGTGTNLTVPTLAPSLSQT--QQVVCGQNCSFLIQSNGVVTAVGE 3076
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
GQ GRLG G+ + P ++ + + + S HS+ L +G VF G F +
Sbjct: 3077 GQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGK 3136
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGH 205
LG ++ P +L+ + ++ + CG HS VV + +++TFG +G+LG
Sbjct: 3137 LGHG---NNERQRRPKQIEALQ-GEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQ 3191
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ +G LG GS + P+ ++ L +K+VC SV V+ DG V++ GQ
Sbjct: 3231 VWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYT--FGQ 3288
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
+GL +S + + + L + ++ +H + L +G V+ G NS QLG
Sbjct: 3289 ERLIGL-PDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLG 3347
Query: 151 L 151
L
Sbjct: 3348 L 3348
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 10/183 (5%)
Query: 42 LGTGSQQTRDVPELLDSLKRASIKQV---CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGS 98
LG G+ VP ++ + + + Q+ C HS+ +++ G V+S G G G+LG G+
Sbjct: 3082 LGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGN 3141
Query: 99 ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHI 158
PK++ + +D + +A HS + G +F G +LG + +
Sbjct: 3142 NERQRRPKQIEALQGEDVVQLACGF---RHSAVVTADGKLFTFGSGESGRLGQRSTSNKM 3198
Query: 159 VSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEP 218
+ Q V CG H++V S + + G G S+A
Sbjct: 3199 LPERVAALEGYHVGQ----VSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQ 3254
Query: 219 KVQ 221
KV+
Sbjct: 3255 KVE 3257
>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
musculus]
gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 746
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRA-SIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G RD + A +IKQ+ S +++DG+++ G
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDN 205
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL +S+V P ++ K ++ S HS F+ + G ++ G +L
Sbjct: 206 SEGQIGLEDKSNVCIPHEVTVGKP-----ISWISCGYYHSAFVTMDGELYTFGEPENGKL 260
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ L + +I V CG H+VV + + VY FG+ GQ G +
Sbjct: 261 GL---PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKVVYAFGL--GQFGQLGLG 315
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKG 263
EPK+ I + I + G H+ E L FG G GK G
Sbjct: 316 TFLFETSEPKIIERIKDQK----ICHISCGENHTALMTELGLLYTFGDGRHGKLG 366
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ +D G V++ G
Sbjct: 92 NKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGG 151
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++ F D + S + S L G +F+ G NS Q
Sbjct: 152 NNEGQLGLGDTDDRDTFHQIVFFTPADT--IKQLSAGANTSAALTEDGKLFMWGDNSEGQ 209
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL S++ P + +P+ + CG +HS V E+YTFG G+LG
Sbjct: 210 IGLE-DKSNVCIP-----HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLG 261
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++++WG N+ +G + +P + K I + +HS FV+ DG +++ G
Sbjct: 198 KLFMWGDNSEGQIGLEDKSNVCIPHEVTVGK--PISWISCGYYHSAFVTMDGELYTFGEP 255
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLG----VAMASISQDHSVFLMLSGSVFVCGLNS 145
+ G+LGL +E +N + LG V + H+V L V+ GL
Sbjct: 256 ENGKLGLPNE------LLMNHRSPQRVLGIPERVIQVACGGGHTVVLT-EKVVYAFGLGQ 308
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFG 197
F QLGL P I R Q + + CG H+ + + +YTFG
Sbjct: 309 FGQLGLGTFLFETSEPKIIERI---KDQKICHISCGENHTALMTELGLLYTFG 358
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+++++ P K L EK V +A+
Sbjct: 80 CGDE-HTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK------VKLAAC 132
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ +G V+ G N+ QLGL
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGL 159
>gi|312065336|ref|XP_003135741.1| hypothetical protein LOAG_00153 [Loa loa]
Length = 2970
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKG-KRLRSKLEAVKQKVR 278
Q II EDLPGFIFESNR TKH F AE +LG +F GW + G +RLR + E K K++
Sbjct: 918 QRLIIVEDLPGFIFESNRQTKHCFQAEKTLGLDFVTGWAARGGERRLRFRAETQKAKLQ 976
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 6/165 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG NAN+ LG G++ P+++ +L+ ++ QV FH+ ++ DG+V + G+G
Sbjct: 264 QLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYG 323
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G+ + P + DK +A + + +G ++ G N +QL
Sbjct: 324 GNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPA---WTAAITENGDLYTWGKNRDYQL 380
Query: 150 GLSPPPSHIVSPTPI--PRS-SLKSSQPLIGVCCGRFHSVVYSSR 191
G+ + P + P++ K+ ++GV CG H V SR
Sbjct: 381 GIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSR 425
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 10/189 (5%)
Query: 22 DVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
+++ + VY WG A LG GS + +P LL+ + I V HS V++ G
Sbjct: 147 NIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESG 206
Query: 82 RVWSCGHGQG-GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSV 138
+++ G +G GRLG G+ ++ L+ L V +AS+ ++ L SG +
Sbjct: 207 ELYTWGRDEGEGRLGHGN-PDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALTKSGQL 265
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
+ G N+ H+LG ++ P ++L+ L+ V CG FH+ + +V T+G
Sbjct: 266 WSWGGNANHELGHGTRANNW---KPKVVAALEDVT-LVQVACGGFHAAALTQDGKVITWG 321
Query: 198 IHA-GQLGH 205
GQLGH
Sbjct: 322 YGGNGQLGH 330
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 95/218 (43%), Gaps = 37/218 (16%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIK------------------QVCMDK 71
EV+ WG + +G GS+ T +P L+ +LK A+ V
Sbjct: 36 EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95
Query: 72 FHSV-FVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSV 130
FHSV F D VW G G GGRLG+ +E + P + + K V MAS H++
Sbjct: 96 FHSVLFAEQDVFVW--GKGDGGRLGIDTEFNQYKP----YVNPRIKR-VQMASAGGLHNI 148
Query: 131 FLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR-SSLKSSQPLIGVCCGRFHS-VVY 188
L G+V+ G +F LG + +PR ++ V G HS V
Sbjct: 149 ALTEVGNVYTWGYGAFGALGHGSYEREL-----LPRLLEGPWKDRIVHVSAGGSHSAAVT 203
Query: 189 SSREVYTFGIHAGQ--LGH-SPVTVSSASVIEP-KVQA 222
S E+YT+G G+ LGH +P + ++ P KVQA
Sbjct: 204 ESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQA 241
>gi|393909108|gb|EJD75321.1| hypothetical protein, variant [Loa loa]
Length = 2447
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKG-KRLRSKLEAVKQKVR 278
Q II EDLPGFIFESNR TKH F AE +LG +F GW + G +RLR + E K K++
Sbjct: 918 QRLIIVEDLPGFIFESNRQTKHCFQAEKTLGLDFVTGWAARGGERRLRFRAETQKAKLQ 976
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDG 81
V + + EVY WG NA LG G+ VP ++ +L + +V HS+ ++ DG
Sbjct: 128 VLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDG 187
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
V++ G+ G++G GS ++ P+++ ++K+ V +A Q S+ ++ +G V+V
Sbjct: 188 EVYTWGYNNSGQVGSGSTANQPIPRRVT-SCLQNKVVVNIAC-GQMCSMAVVENGEVYVW 245
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA 200
G N QLGL + PTP ++L+ + + V CG H++V + ++Y +G ++
Sbjct: 246 GYNGNGQLGLGSSGNQ---PTPCRIAALQGIR-VQRVACGCAHTLVLTDEGQIYAWGANS 301
Query: 201 -GQLG 204
GQLG
Sbjct: 302 YGQLG 306
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+EV++ G N + LGTG Q+ P+ LDSL K C+ H V +++G V++
Sbjct: 81 DEVFVLGMNCSGCLGTGDIQSTIEPKRLDSL--CGKKIACLSYGSGPHVVLATEEGEVYT 138
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P +++ +K + VA S HS+ L G V+ G N
Sbjct: 139 WGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGS---HHSMVLTSDGEVYTWGYN 195
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR +S ++ ++ + CG+ S+ V + EVY +G +
Sbjct: 196 NSGQVG-----SGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGN 250
Query: 201 GQLG 204
GQLG
Sbjct: 251 GQLG 254
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG N N LG GS + P + +L+ +++V H++ ++D+G++++ G
Sbjct: 241 EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGAN 300
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
G+LG G++S+ P + DKD++ A S S SG V++ G
Sbjct: 301 SYGQLGTGNKSNQSYPTTVTV--DKDRVVEIAACHSAHTSAAKTQSGQVYMWG 351
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++V+++ V+ G G LG G S + PK+L+ G
Sbjct: 61 IRQACV--FGSAGNEVLYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLD-----SLCG 113
Query: 119 VAMASISQD---HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
+A +S H V G V+ G N++ QLG +V P S+ ++ +
Sbjct: 114 KKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLV---PCQVSTNLVNKKV 170
Query: 176 IGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
I V CG HS+V +S EVYT+G ++GQ+G + P+ S ++ KV I
Sbjct: 171 IEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNI 226
>gi|393909107|gb|EFO28334.2| hypothetical protein LOAG_00153 [Loa loa]
Length = 2930
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKG-KRLRSKLEAVKQKVR 278
Q II EDLPGFIFESNR TKH F AE +LG +F GW + G +RLR + E K K++
Sbjct: 918 QRLIIVEDLPGFIFESNRQTKHCFQAEKTLGLDFVTGWAARGGERRLRFRAETQKAKLQ 976
>gi|295789059|ref|NP_001171423.1| X-linked retinitis pigmentosa GTPase regulator isoform 4 [Mus
musculus]
gi|74223915|dbj|BAE23845.1| unnamed protein product [Mus musculus]
Length = 651
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRA-SIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G RD + A +IKQ+ S +++DG+++ G
Sbjct: 51 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDN 110
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL +S+V P ++ K ++ S HS F+ + G ++ G +L
Sbjct: 111 SEGQIGLEDKSNVCIPHEVTVGKP-----ISWISCGYYHSAFVTMDGELYTFGEPENGKL 165
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ L + +I V CG H+VV + + VY FG+ GQ G +
Sbjct: 166 GL---PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKVVYAFGL--GQFGQLGLG 220
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKG 263
EPK+ I + I + G H+ E L FG G GK G
Sbjct: 221 TFLFETSEPKIIERIKDQK----ICHISCGENHTALMTELGLLYTFGDGRHGKLG 271
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 33 IWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGG 92
++G+N LG GS+ P + +LK +K + H++ +D G V++ G G
Sbjct: 1 MFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEG 60
Query: 93 RLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS 152
+LGLG + ++ F D + S + S L G +F+ G NS Q+GL
Sbjct: 61 QLGLGDTDDRDTFHQIVFFTPADT--IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLE 118
Query: 153 PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
S++ P + +P+ + CG +HS V E+YTFG G+LG
Sbjct: 119 -DKSNVCIP-----HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLG 166
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++++WG N+ +G + +P + K I + +HS FV+ DG +++ G
Sbjct: 103 KLFMWGDNSEGQIGLEDKSNVCIPHEVTVGK--PISWISCGYYHSAFVTMDGELYTFGEP 160
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLG----VAMASISQDHSVFLMLSGSVFVCGLNS 145
+ G+LGL +E +N + LG V + H+V L V+ GL
Sbjct: 161 ENGKLGLPNE------LLMNHRSPQRVLGIPERVIQVACGGGHTVVLT-EKVVYAFGLGQ 213
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFG 197
F QLGL P I R Q + + CG H+ + + +YTFG
Sbjct: 214 FGQLGLGTFLFETSEPKIIERI---KDQKICHISCGENHTALMTELGLLYTFG 263
>gi|350580248|ref|XP_003122992.3| PREDICTED: secretion-regulating guanine nucleotide exchange factor
isoform 1 [Sus scrofa]
Length = 458
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 8/151 (5%)
Query: 17 RDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSV 75
R+ ++ ++ WG N+ LG G ++ +P+ L K +K++ HS
Sbjct: 3 REPSASEAAPPATALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSA 62
Query: 76 FVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLM 133
V+D G ++ CG + G+LGLG V L F K LG + ++ D ++ L
Sbjct: 63 IVTDQGSLFVCGLNKDGQLGLGHTEDV-----LYFTLCKSLLGCPIQQVACGWDFTIILT 117
Query: 134 LSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI 164
+G V CG NSF QLG+ P V P I
Sbjct: 118 KNGQVLSCGSNSFGQLGVPHGPRRCVVPQAI 148
>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 708
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 15/181 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG+N G G+ P + + V + FHS+ VS DG W+ GH
Sbjct: 332 VWAWGSNVEGQRGDGTTGQLSAPT--RVPGVSGVVGVAANVFHSLAVSADGSAWAWGHNS 389
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G LG GS + SP + + K+ + VA S HS+ L+ G+V G N+F QLG
Sbjct: 390 HGELGDGSTRN--SPAPVRVDGLKEVVAVAAGS---SHSLALLADGTVLAWGDNTFGQLG 444
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLGHSPV 208
SH V + ++ + ++ V G HS+ + + V+T+G + GQLG
Sbjct: 445 DGTRASHSVP------AQVRGLRGVVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDGTT 498
Query: 209 T 209
T
Sbjct: 499 T 499
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 31/184 (16%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N++ LG GS R P + L + V +HS+ VS DG VW+ G+
Sbjct: 81 VWAWGNNSSGQLGDGSFDNRAEPVRVRGLS--GVVAVAAGGYHSLAVSADGTVWAWGNNS 138
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG GS + P ++ + GV + HS+ + G ++ G N + QLG
Sbjct: 139 SGQLGDGSFDNRAEPVRV-----RGSSGVVAVAAGGAHSLAVRSDGILWAWGDNLYGQLG 193
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPL--------IGVCCGRFHSVVYSSR-EVYTFGIHA- 200
R SS+P+ + V G HS+ S+ V+ +G ++
Sbjct: 194 --------------NRGEFNSSEPVQVLRVTGGVTVSAGANHSLAVSADGTVWAWGDNSH 239
Query: 201 GQLG 204
GQLG
Sbjct: 240 GQLG 243
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 17/142 (11%)
Query: 32 YIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
+ WG N++ LG GS +R +P + + V HS+ +S +G VW+ G
Sbjct: 581 WAWGNNSSGQLGDGSTTSRPMPMRVQGAGE--VVAVAAGNGHSLALSPEGGVWAWGQNAR 638
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML---SGSVFVCGLNSFHQ 148
G+LG G+ ++P ++ G++ F + GSV+ G N+F Q
Sbjct: 639 GQLGEGTLDRRLAPTRVQ--------GLSGVVAVAAGGAFSLAVRDDGSVWSWGDNAFGQ 690
Query: 149 LGLSPPPSHIVSPTPIPRSSLK 170
LG +PP V T + RS L+
Sbjct: 691 LGNAPP----VYATFVVRSLLE 708
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+S +Q V+ G N+ LG G+ R VP + L + + V HS+ V DG
Sbjct: 23 LSVHQDGTVWAVGGNSVGQLGDGTTSLRRVPVRV--LGLSGVVTVAAGGGHSLAVHSDGT 80
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
VW+ G+ G+LG GS + P ++ + GV + HS+ + G+V+ G
Sbjct: 81 VWAWGNNSSGQLGDGSFDNRAEPVRV-----RGLSGVVAVAAGGYHSLAVSADGTVWAWG 135
Query: 143 LNSFHQLG 150
NS QLG
Sbjct: 136 NNSSGQLG 143
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N N LG G+ R P + L+ + V HS+ V DG W+ G
Sbjct: 482 VWTWGYNLNGQLGDGTTTYRYEPVAVKGLE--GVVAVAAGGNHSLAVRSDGTAWAWGENV 539
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ +S +P ++ + +Q S+ + G + G NS QLG
Sbjct: 540 KGQLGDGTLTSRPAPVEVKAAA-------KAVAAAQGLSLAVGSDGFPWAWGNNSSGQLG 592
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
S P P+ ++ + ++ V G HS+ S V+ +G +A GQLG
Sbjct: 593 DGSTTSR---PMPM---RVQGAGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLG 642
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 7/120 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V WG N LG G++ + VP + L+ + V HS+ + DG VW+ G+
Sbjct: 432 VLAWGDNTFGQLGDGTRASHSVPAQVRGLR--GVVAVAAGSSHSLALLADGTVWTWGYNL 489
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ + P + K GV + +HS+ + G+ + G N QLG
Sbjct: 490 NGQLGDGTTTYRYEPVAV-----KGLEGVVAVAAGGNHSLAVRSDGTAWAWGENVKGQLG 544
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 17/179 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+ WG N LG G+ +R P E+ + K + Q S+ V DG W+ G+
Sbjct: 532 AWAWGENVKGQLGDGTLTSRPAPVEVKAAAKAVAAAQGL-----SLAVGSDGFPWAWGNN 586
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG GS +S P ++ + V + HS+ L G V+ G N+ QL
Sbjct: 587 SSGQLGDGSTTSRPMPMRVQGAGE-----VVAVAAGNGHSLALSPEGGVWAWGQNARGQL 641
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHA-GQLGHSP 207
G + +PT + S + G F V V+++G +A GQLG++P
Sbjct: 642 GEGTLDRRL-APTRVQGLSGVVAV----AAGGAFSLAVRDDGSVWSWGDNAFGQLGNAP 695
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 8/121 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + P + L+ V HS+ VS DG VW+ G
Sbjct: 181 LWAWGDNLYGQLGNRGEFNSSEP--VQVLRVTGGVTVSAGANHSLAVSADGTVWAWGDNS 238
Query: 91 GGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG+ + ++S P ++ + VAMA+ +HS+ + G+V+ G N QL
Sbjct: 239 HGQLGIARTTPLLSIPGRVPEVRGS----VAMAA-GDNHSLAVRDDGTVWAWGSNGHGQL 293
Query: 150 G 150
G
Sbjct: 294 G 294
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 65 KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASI 124
++ HS+ V DG VW+ G G+LG G+ S P ++ GV +
Sbjct: 13 ARIATGGSHSLSVHQDGTVWAVGGNSVGQLGDGTTSLRRVPVRV-----LGLSGVVTVAA 67
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFH 184
HS+ + G+V+ G NS QLG S P+ L ++ V G +H
Sbjct: 68 GGGHSLAVHSDGTVWAWGNNSSGQLG---DGSFDNRAEPVRVRGLSG---VVAVAAGGYH 121
Query: 185 SVVYSSR-EVYTFGIH-AGQLG 204
S+ S+ V+ +G + +GQLG
Sbjct: 122 SLAVSADGTVWAWGNNSSGQLG 143
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 18/126 (14%)
Query: 31 VYIWGTNANYNLGTGSQQT-----RDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWS 85
V+ WG N++ LG VPE+ R S+ D HS+ V DDG VW+
Sbjct: 231 VWAWGDNSHGQLGIARTTPLLSIPGRVPEV-----RGSVAMAAGDN-HSLAVRDDGTVWA 284
Query: 86 CGHGQGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
G G+LG G P ++ E GV + +HS+ + G+V+ G N
Sbjct: 285 WGSNGHGQLGNGFMVDNSEPGRVPGLE------GVGAVAAGSNHSLAVRDDGTVWAWGSN 338
Query: 145 SFHQLG 150
Q G
Sbjct: 339 VEGQRG 344
>gi|328768002|gb|EGF78050.1| hypothetical protein BATDEDRAFT_91182 [Batrachochytrium
dendrobatidis JAM81]
Length = 1664
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 111/241 (46%), Gaps = 37/241 (15%)
Query: 12 IDHLIRDRKIDVSSNQFN---EVYIWGTNANYNLGTGSQQTRDVPELLD----------- 57
+D + D+ SS N V+ WG+N N+ LG + Q R +PE +D
Sbjct: 162 VDTFLDDQSFPNSSTLLNPATSVWSWGSNKNFTLGFPNTQDRAIPEQIDLVHSLHTTGNV 221
Query: 58 -------SLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNF 110
S + ++QV M K+H + D R+++ G G GGRLGLG E + + P ++
Sbjct: 222 PVSYATLSEYDSQVEQVVMSKYHVCIRTKD-RLYTHGFGGGGRLGLGHEETTMRPTEVT- 279
Query: 111 EKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLK 170
+ + +G A DH++ + L+G V+ G N + QLG S +PR
Sbjct: 280 -ELTNNIGFVAA--GPDHTIAITLNGDVWTWGSNKYAQLGYYSE----ASGDSLPRECHP 332
Query: 171 SSQPLIGVCC-----GRFHSVVYSSREV-YTFGIHAGQLGH-SPVTVSSASVIEPKVQAT 223
L C ++HSVVY++ V YT+G + GQLG+ PV V V VQ
Sbjct: 333 QMVQLKKTVCVGGAGSKYHSVVYTTSGVIYTWGTNNGQLGYQQPVQVVPRKVTSFPVQMI 392
Query: 224 I 224
+
Sbjct: 393 L 393
>gi|68073201|ref|XP_678515.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499009|emb|CAH95917.1| conserved hypothetical protein [Plasmodium berghei]
Length = 426
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 98/212 (46%), Gaps = 19/212 (8%)
Query: 29 NEVYIWGTNANY-----NLGTGSQQTRDVPELLDSLKR--ASIKQVCMDKFHSVFVSDDG 81
N++Y WG N+ LG G++ P+ +++ + +C + HS+ +++ G
Sbjct: 149 NDLYSWGWGGNFFKGANGLGQGNKNNLMKPQKIEAFNNDNSEFINICCGEQHSLALTESG 208
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
+V+ CG G+ GRLG G+ + +++++ + + + + + S L +G V+V
Sbjct: 209 KVYGCGKGEFGRLGKGNHGDQLFFEEIDYFTNNNII-IKDIACGNSFSAALSNNGEVYVW 267
Query: 142 GLNSFHQLGLSPP----PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
G N + QLG+ SH V P + +++ + + + CG H + S + F
Sbjct: 268 GRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKIKL-IACGDNHMIACSESNIIYF- 325
Query: 198 IHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
G A + PK Q ++I++++
Sbjct: 326 -----WGSRAWLEPKAITLNPKYQNSLIKKNI 352
>gi|440901734|gb|ELR52623.1| Serine/threonine-protein kinase Nek9, partial [Bos grunniens mutus]
Length = 888
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
++Y +G++ +G +V P LD ++QV H V ++ + V+S G
Sbjct: 461 QLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNKEVYSWG 520
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+ GRLGL SE +P+K++ K L + D + L SG V CGLN F+
Sbjct: 521 CGEYGRLGLDSEEDYYTPQKVDVPK---ALIIVAVQCGCDGTFLLTQSGKVLACGLNEFN 577
Query: 148 QLGLSPPPSHIVS-----PTPIPRSSLKSSQ----PLIGVCCGRFHSVVYSSR-EVYTFG 197
+LGL+ S I++ P P S + Q + + G+ H+ R + TFG
Sbjct: 578 KLGLNQCMSGIINHEAYHEVPYPTSFTLAKQLSFYKIRTIAPGKTHTAALDERGRLLTFG 637
Query: 198 IH-AGQLG 204
+ GQLG
Sbjct: 638 CNKCGQLG 645
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 27/213 (12%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK 60
+T+++ RP + + I V +++ +EVY+WG G + T P+ LD +K
Sbjct: 334 VTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWG---------GGKST---PQKLDVIK 381
Query: 61 R-ASIKQVCMDKFHSVFVSDDGRVWSCGHGQG-----GRLGLGSESSVVSPKKLNFEKDK 114
S +QVC H V+ + +++ + QG G+LG G ++S PK + EK +
Sbjct: 382 SGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK--HVEKLQ 439
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPP-SHIVSPTPIPRSSLKSSQ 173
K + S D +V + G ++ G + + +G+ + ++ P + S
Sbjct: 440 GK-AIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQL---DFFLSN 495
Query: 174 PLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
P+ V CG H VV + ++EVY++G G+LG
Sbjct: 496 PVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLG 528
>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
boliviensis boliviensis]
Length = 1170
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NDEGQLGLGDTEERTTFHLISFFTPQHK--IKQLSAGSNTSAALTEDGRLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL P+ V + + +P+ + CG +HS V + E+Y FG G+LG
Sbjct: 172 IGLPDMPNACVP------HQVTTGKPVSWISCGYYHSAFVTTDGELYIFGEPENGKLG 223
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+S+V P K L EK V +A+
Sbjct: 42 CGDE-HSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N QLGL
Sbjct: 95 GRNHTLVSTEGGNVYATGGNDEGQLGL 121
>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1289
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E+Y WG+ + LG G + R VP + SL R S+ H+ ++ G V++ G G
Sbjct: 573 ELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVVSASCGGAHTAVLTAKGSVFTFGRG 632
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ GRLGLG +P + F + +++ + + L GSVF G Q
Sbjct: 633 RNGRLGLGDNKWRDTPHPIVGFPQGT---SISLVVCGWNFTAALDRQGSVFTWGKTGEGQ 689
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
GL V P + + + ++ V CG H+VV + S E+Y++G+ GQLG
Sbjct: 690 CGLGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLG 747
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 7/144 (4%)
Query: 55 LLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDK 114
L +L R +I V HS+ ++D G +++ G G+ GRLG G P+K+
Sbjct: 546 LEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKV---MSL 602
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQP 174
+ V AS H+ L GSVF G +LGL + TP P
Sbjct: 603 LRESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLG---DNKWRDTPHPIVGFPQGTS 659
Query: 175 LIGVCCG-RFHSVVYSSREVYTFG 197
+ V CG F + + V+T+G
Sbjct: 660 ISLVVCGWNFTAALDRQGSVFTWG 683
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 114/257 (44%), Gaps = 20/257 (7%)
Query: 13 DHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVP---ELLDSLKRASIKQVCM 69
+ + R DV N VY+WG N LG +P E+L LK I
Sbjct: 2908 EQMTAQRASDVQQNA--AVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGSK 2965
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHS 129
F VS +G++++CG G GRLGLG ++V PK + F VA+ S + H+
Sbjct: 2966 TLF---VVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGK-HA 3021
Query: 130 VFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS 189
+ L G VF G +LG + + P +LKS + + + CG HS +
Sbjct: 3022 LALTQDGKVFSWGEGEDGKLGHG---NRVSLDKPRLIEALKSKR-IRDIACGSGHSAAIA 3077
Query: 190 SR-EVYTFGI-HAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAE 247
S E+YT+G+ G+LGH T ++PK+ ++ + + S + T +
Sbjct: 3078 SNGELYTWGLGEYGRLGHGDTTTH----LKPKLVDALVGQRVIQVACGSRDAQTMALTED 3133
Query: 248 TSLGPEFGGGWTGKKGK 264
S+ +G G GK G+
Sbjct: 3134 GSV-YSWGDGDFGKLGR 3149
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
++ Q +V+ WG + LG G++ + D P L+++LK I+ + HS ++ +G
Sbjct: 3022 LALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGE 3081
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
+++ G G+ GRLG G ++ + PK ++ + + VA S ++ L GSV+ G
Sbjct: 3082 LYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGS-RDAQTMALTEDGSVYSWG 3140
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSREVYTFG 197
F +LG SP P+ R + ++ V CG +F + EV+T+G
Sbjct: 3141 DGDFGKLGRGGSDG-CYSPLPVDR---LNGLGVVQVECGAQFSLALTKYGEVWTWG 3192
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 88/227 (38%), Gaps = 57/227 (25%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G++ T D P+L+++L I + HS +S G +++ G G+
Sbjct: 4002 VYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGR 4061
Query: 91 GGRLGLGSESSVVSPKKLNF-------------------------------EKDKDKL-- 117
GRLG G + P + + D KL
Sbjct: 4062 YGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4121
Query: 118 ------------------GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV SV L SG+V+ G +H+LG H+
Sbjct: 4122 GGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLG-HGTDDHVR 4180
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
P + S+L+ + ++ + G H V S + EVYT+G + GQLG
Sbjct: 4181 RPRKV--SALQGKK-IVSIATGSLHCVACSDKGEVYTWGDNDEGQLG 4224
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCG 87
+ V+ WG LG G VP ++SL + +V C +F SV ++ G V++ G
Sbjct: 4106 DNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQF-SVALTRSGAVYTWG 4164
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G RLG G++ V P+K++ + K + +A S+ H V G V+ G N
Sbjct: 4165 KGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSL---HCVACSDKGEVYTWGDNDEG 4221
Query: 148 QLG-------LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
QLG SP H + I R V CG H++ +S+
Sbjct: 4222 QLGDGTTHAQQSPRLVHALQGKNITR-----------VACGSAHTLAWST 4260
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 12 IDHLIRDRKIDVSS----------NQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKR 61
+D L+ R I V+ + VY WG LG G P +D L
Sbjct: 3107 VDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNG 3166
Query: 62 ASIKQV-CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVA 120
+ QV C +F S+ ++ G VW+ G G RLG G++ V P + + K + VA
Sbjct: 3167 LGVVQVECGAQF-SLALTKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVA 3225
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCC 180
+ ++ H + + +G V+ G N Q G S +V+ P +L+ ++ + V C
Sbjct: 3226 VGAL---HCLAVTDAGQVYAWGDNDHGQQGNG---STMVNRKPSLVHNLEDAK-VNRVAC 3278
Query: 181 GRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEPKVQATI 224
G HS+ + + T G PVT +A +P QAT+
Sbjct: 3279 GSSHSIAWVLTDQPTLG------NQEPVTFPTAK--DPLGQATL 3314
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDK--FHSVFVSDDGRVWSCG 87
+VY G A LGTG + VP LL+S++ IK+V ++ H + +S +G V+S G
Sbjct: 3947 KVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWG 4006
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNS 145
G G+LG G+ + PK + + LG + I+ HS + +G ++ G
Sbjct: 4007 EGDDGKLGHGNRITYDRPKLI-----EALLGTEIVDIACGGHHSAAISSAGWLYTWGKGR 4061
Query: 146 FHQLG 150
+ +LG
Sbjct: 4062 YGRLG 4066
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
V+ WG LG G +P+++D L ++ +V C +F S ++ G V++ G G
Sbjct: 628 VFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQF-SAALTAHGEVYTWGKG 686
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
RLG G+E V PK + ++K V S+ H + + V+ G N Q
Sbjct: 687 DHYRLGHGNEEHVRFPKLVEGLRNKK---VRDLSVGNLHILAITEDQLVYGWGRNDACQ- 742
Query: 150 GLSPPPSHIVS-PTPIPRSSLKSSQPLIGVCCGRFHSVVYS 189
+ P +VS PT P S KS +IG+ CG S +S
Sbjct: 743 -IDPSLGAVVSEPTLCPTLSGKS---VIGLVCGPMQSFAWS 779
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 4/167 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG LG G + D P++++ L ++ + +S +S G + + G G
Sbjct: 522 VYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGS 581
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG G + P + VA S ++ + SG VF G + +LG
Sbjct: 582 YGRLGHGICDDISIPTVVTALNGHTVTHVACGS-GDSQTLCVTNSGIVFSWGDGDYGKLG 640
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
S P L + C G+F + + + EVYT+G
Sbjct: 641 RGGSDG---SKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWG 684
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 18/221 (8%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ V+ + VY WG + LG G+ P + +L+ I + H V SD
Sbjct: 4149 QFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSD 4208
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
G V++ G G+LG G+ + SP+ ++ + K+ VA S H++ + +
Sbjct: 4209 KGEVYTWGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSA---HTLAWSTTKAT- 4264
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVY--TFG 197
H L + P + + +P S+L + L+ F ++ + ++ T
Sbjct: 4265 -------HSLPAATPMEYDLVKD-LPFSALHNRLVLL----HHFAELLCPTLAMFPTTGN 4312
Query: 198 IHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNR 238
+ +L V + VQAT++R+ G I E NR
Sbjct: 4313 VALNKLAPMLVYTIKEATFRKVVQATMVRDRQHGPIIELNR 4353
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 7/177 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG N LG +P +SL Q+ + V+ DG+V++ G+G
Sbjct: 3896 IYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYATGYGA 3955
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG G SV+ P L + VA+ S + H + L G V+ G +LG
Sbjct: 3956 LGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGK-HCLALSSEGHVYSWGEGDDGKLG 4014
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGH 205
+ I P +L ++ ++ + CG HS SS +YT+G G+LGH
Sbjct: 4015 HG---NRITYDRPKLIEALLGTE-IVDIACGGHHSAAISSAGWLYTWGKGRYGRLGH 4067
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG +Y LG G+++ P+L++ L+ ++ + + H + +++D V+ G
Sbjct: 679 EVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRN 738
Query: 90 QGGRL 94
++
Sbjct: 739 DACQI 743
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 61/169 (36%), Gaps = 54/169 (31%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM--------------- 69
+ F EV WG N + G+GS +P D++ +KQ+C
Sbjct: 429 TQTFQEVLAWG---NVHFGSGS-----MPFYCDAIAEIGVKQLCCTERALLILSLSGKVY 480
Query: 70 ----------------------------DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESS 101
D H + ++ G V+S G+G GGRLG G S
Sbjct: 481 MMYYGSETQYPQSVYGFADDVVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDSFS 540
Query: 102 VVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
P+ + D+ +A S +S + +G + G S+ +LG
Sbjct: 541 CDEPQVIEVLSDRTVTYIACGST---YSAAISSTGELLTWGRGSYGRLG 586
>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
Length = 537
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L++L I + H + ++DG V++ G
Sbjct: 47 DEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWG 106
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
H +LG G+ + V+P ++ K V + HS+ L G ++ G N+
Sbjct: 107 HNGYSQLGNGATNQGVTPVQVCTNLLLKK--VIEVACGSHHSMALSFDGDLYAWGYNNCG 164
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP S+ + ++G+ CG+ S+ V ++ EVY +G + GQLG
Sbjct: 165 QVGSGSTANQ---PTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLG 220
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L I Q+ H++ ++D+G +++ G
Sbjct: 207 EVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGAN 266
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDH-SVFLMLSGSVFVCG 142
G+LG G++S+ +SP ++ EK++ V +A+ H S SG V++ G
Sbjct: 267 TYGQLGTGNKSNQLSPLQIMMEKERV---VEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELL-DSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++Y WG N +G+GS + P + + L+ + + + S+ V ++G V+ G+
Sbjct: 154 DLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGY 213
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSF 146
G+LGLG+ + ++P ++ GV + I+ H++ L G ++ G N++
Sbjct: 214 NGNGQLGLGNNGNQLTPCRV-----AALHGVCILQIACGYAHTLALTDEGLLYAWGANTY 268
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHAGQ 202
QLG + S+ +SP I + + I C S + S +VY +G GQ
Sbjct: 269 GQLG-TGNKSNQLSPLQIMMEKERVVE--IAACHSAHTSAAKTQSGQVYMWGQCRGQ 322
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++ + + V+ G LG G S + PKKL E
Sbjct: 18 LLSPQEIASIRKACVFGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKL--E 75
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
K +++ S H + G V+ G N + QLG + + V+P + + L
Sbjct: 76 ALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLG-NGATNQGVTPVQVCTNLLL- 133
Query: 172 SQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
+ +I V CG HS+ S ++Y +G + GQ+G
Sbjct: 134 -KKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVG 167
>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
Length = 590
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRA-SIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G RD + A +IKQ+ S +++DG+++ G
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDN 205
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL +S+V P ++ K ++ S HS F+ + G ++ G +L
Sbjct: 206 SEGQIGLEDKSNVCIPHEVTVGKP-----ISWISCGYYHSAFVTMDGELYTFGEPENGKL 260
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ L + +I V CG H+VV + + VY FG+ GQ G +
Sbjct: 261 GL---PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKVVYAFGL--GQFGQLGLG 315
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKG 263
EPK+ I + I + G H+ E L FG G GK G
Sbjct: 316 TFLFETSEPKIIERIKDQK----ICHISCGENHTALMTELGLLYTFGDGRHGKLG 366
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ +D G V++ G
Sbjct: 92 NKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGG 151
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++ F D + S + S L G +F+ G NS Q
Sbjct: 152 NNEGQLGLGDTDDRDTFHQIVFFTPADT--IKQLSAGANTSAALTEDGKLFMWGDNSEGQ 209
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL S++ P + +P+ + CG +HS V E+YTFG G+LG
Sbjct: 210 IGLE-DKSNVCIP-----HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLG 261
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++++WG N+ +G + +P + K I + +HS FV+ DG +++ G
Sbjct: 198 KLFMWGDNSEGQIGLEDKSNVCIPHEVTVGK--PISWISCGYYHSAFVTMDGELYTFGEP 255
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLG----VAMASISQDHSVFLMLSGSVFVCGLNS 145
+ G+LGL +E +N + LG V + H+V L V+ GL
Sbjct: 256 ENGKLGLPNE------LLMNHRSPQRVLGIPERVIQVACGGGHTVVLT-EKVVYAFGLGQ 308
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFG 197
F QLGL P I R Q + + CG H+ + + +YTFG
Sbjct: 309 FGQLGLGTFLFETSEPKIIER---IKDQKICHISCGENHTALMTELGLLYTFG 358
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+++++ P K L EK V +A+
Sbjct: 80 CGDE-HTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK------VKLAAC 132
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ +G V+ G N+ QLGL
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGL 159
>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
gallopavo]
Length = 537
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L++L I + H + ++DG V++ G
Sbjct: 47 DEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWG 106
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
H +LG G+ + V+P ++ K V + HS+ L G ++ G N+
Sbjct: 107 HNGYSQLGNGATNQGVTPVQVCTNLLLKK--VIEVACGSHHSMALSFDGDLYAWGYNNCG 164
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP S+ + ++G+ CG+ S+ V ++ EVY +G + GQLG
Sbjct: 165 QVGSGSTANQ---PTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLG 220
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L I Q+ H++ ++D+G +++ G
Sbjct: 207 EVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGAN 266
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDH-SVFLMLSGSVFVCG 142
G+LG G++S+ +SP ++ EK++ V +A+ H S SG V++ G
Sbjct: 267 TYGQLGTGNKSNQLSPLQIMMEKERV---VEIAACHSAHTSAAKTQSGQVYMWG 317
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELL-DSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++Y WG N +G+GS + P + + L+ + + + S+ V ++G V+ G+
Sbjct: 154 DLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGY 213
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSF 146
G+LGLG+ + ++P ++ GV + I+ H++ L G ++ G N++
Sbjct: 214 NGNGQLGLGNNGNQLTPCRV-----AALHGVCILQIACGYAHTLALTDEGLLYAWGANTY 268
Query: 147 HQLGLSPPPSHIVSPTPI 164
QLG + S+ +SP I
Sbjct: 269 GQLG-TGNKSNQLSPLQI 285
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++ + + V+ G LG G S + PKKL E
Sbjct: 18 LLSPQEIASIRKACVFGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKL--E 75
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
K +++ S H + G V+ G N + QLG + + V+P + + L
Sbjct: 76 ALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLG-NGATNQGVTPVQVCTNLLL- 133
Query: 172 SQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
+ +I V CG HS+ S ++Y +G + GQ+G
Sbjct: 134 -KKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVG 167
>gi|297282340|ref|XP_002808321.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2-like [Macaca mulatta]
Length = 491
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 127 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 183
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 184 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 239
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 240 NLYSFGCPEYGQLGHN 255
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 136 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 195
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 196 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 251
Query: 149 LG 150
LG
Sbjct: 252 LG 253
>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_b [Mus musculus]
Length = 563
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 18 DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVF 76
+ I V+ N +EV+++G N + LGTG Q+ VP+ L++L IK + H +
Sbjct: 64 NEAIYVTDN--DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLL 121
Query: 77 VSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLS 135
++DG V++ GH +LG G+ + ++P ++ K + VA S HS+ L
Sbjct: 122 TTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGS---HHSMALAAD 178
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVY 194
G +F G N+ Q+G + PTP ++ ++ ++ + CG+ S+ V S EVY
Sbjct: 179 GELFAWGYNNCGQVGSGSTANQ---PTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY 235
Query: 195 TFGIHA-GQLG 204
+G + GQLG
Sbjct: 236 GWGYNGNGQLG 246
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 233 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGAN 292
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG GS+++++SP ++ EK++
Sbjct: 293 TYGQLGTGSKNNLLSPTQIMVEKER 317
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E++ WG N +G+GS + P ++ + L + + + S+ V D G V+ G+
Sbjct: 180 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 239
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 240 NGNGQLGLGNNGNQLTPVRV---AALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 296
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SPT I
Sbjct: 297 LG-TGSKNNLLSPTQI 311
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 53 PELLDSLKRA---------SIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSES 100
P +LD+L A SI++ C+ +++V+D+ V+ G LG G
Sbjct: 33 PFVLDTLWLAWERSSEEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQ 92
Query: 101 SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVS 160
S + PKKL E K +++ S H + G V+ G N + QLG + + ++
Sbjct: 93 STLVPKKL--EALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLG-NGTTNQGIA 149
Query: 161 PTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
P + + L + +I V CG HS+ ++ E++ +G + GQ+G
Sbjct: 150 PVQVCTNLL--IKQVIEVACGSHHSMALAADGELFAWGYNNCGQVG 193
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EVY WG NA LG G+ +P + +L + +V HS+ ++ DG V++ G+
Sbjct: 289 EVYTWGHNAYSQLGNGTTNHGLIPCHVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGY 348
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ ++K+ +A Q S+ ++ SG V+V G N Q
Sbjct: 349 NNSGQVGSGSTANQPIPRRVT-SCLQNKIATNIAC-GQMCSMAVVESGEVYVWGYNGNGQ 406
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHS 206
LGL + PTP ++L+ + + V CG H++V + ++Y +G ++ GQLG
Sbjct: 407 LGLGSSGNQ---PTPCRIAALQGIR-VQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTG 462
Query: 207 ---------PVTVSSASVIE 217
PV V +IE
Sbjct: 463 NKSNQSYPIPVPVEKDRIIE 482
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 16/187 (8%)
Query: 25 SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDG 81
+ + +EV++ GTN + LGTG Q P +DSL K C+ H V + +G
Sbjct: 231 ATENDEVFVLGTNCSGCLGTGDVQNTIEPRRIDSL--CGKKITCLSYGSGPHVVVATAEG 288
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
V++ GH +LG G+ + + P ++ K V + HS+ L G V+
Sbjct: 289 EVYTWGHNAYSQLGNGTTNHGLIPCHVSTNLVNKK--VVEVACGSHHSLVLTSDGEVYAW 346
Query: 142 GLNSFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI 198
G N+ Q+G S + PIPR +S ++ + CG+ S+ V S EVY +G
Sbjct: 347 GYNNSGQVG-----SGSTANQPIPRRVTSCLQNKIATNIACGQMCSMAVVESGEVYVWGY 401
Query: 199 HA-GQLG 204
+ GQLG
Sbjct: 402 NGNGQLG 408
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ +++ V+ G G LG G + + P++++ K
Sbjct: 215 IRQACV--FGSAGNEVLYATENDEVFVLGTNCSGCLGTGDVQNTIEPRRIDSLCGKKITC 272
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G V+ G N++ QLG + +H + P + S+ ++ ++ V
Sbjct: 273 LSYG--SGPHVVVATAEGEVYTWGHNAYSQLG-NGTTNHGLIPCHV--STNLVNKKVVEV 327
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG HS+V +S EVY +G ++GQ+G + P+ S ++ K+ I
Sbjct: 328 ACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNI 380
>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
africana]
Length = 531
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L++L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGMNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSAPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + V+P ++ K + VA S HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGS---HHSMALAADGEVFAWGYNNC 157
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 158 GQVGSGSTANQ---PTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACG---QTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDH-SVFLMLSGSVFVCG 142
G+LG G++++++SP + EK++ V +A+ H S SG+V++ G
Sbjct: 261 TYGQLGTGNKNNLLSPAHVLVEKERV---VEIAACHSAHTSAAKTQSGNVYMWG 311
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P ++ + L + + + S+ V D+G V+ G+
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SP +
Sbjct: 265 LG-TGNKNNLLSPAHV 279
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+D+ V+ G LG G S + PKKL
Sbjct: 12 LLSPQEIASIRKACVFGTSGNEALYVTDNDEVFVFGMNYSNCLGTGDNQSTLVPKKL--- 68
Query: 112 KDKDKLGVAMASISQDHSVFLMLS---GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
+ G + S+S + ++LS G V+ G N + QLG + + V+P + +
Sbjct: 69 --EALCGKKIKSLSYGSAPHVLLSTEDGVVYAWGHNGYSQLG-NGTTNQGVAPIQVCTNL 125
Query: 169 LKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
L + ++ V CG HS+ ++ EV+ +G + GQ+G
Sbjct: 126 L--IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG 161
>gi|241121413|ref|XP_002403206.1| regulator of chromosome condensation, putative [Ixodes scapularis]
gi|215493385|gb|EEC03026.1| regulator of chromosome condensation, putative [Ixodes scapularis]
Length = 309
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+VY +G N + LG SQ+ + P L+ SL IKQ+ HS+ ++D G + G
Sbjct: 78 KVYGFGMNTEHQLGLDSQEFQHTEPALIRSLTGLQIKQLAAGAEHSIALTDKGVAFVWGC 137
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSVFVCGLNSF 146
G+ G+LGLG+ SV P +L K+ + + S+S H+ + G V+ G
Sbjct: 138 GKEGQLGLGTRPSVPEPLEL-------KVDIRIMSVSAGYYHTAIVSAEGKVYAFGDGRN 190
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR 191
QLGL + P PIP + V CG H+ S +
Sbjct: 191 GQLGLGNKTTQSSKPQPIP---FPEGIKIARVVCGESHTAFLSGK 232
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 20 KIDVSSNQFNE--VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFV 77
K+ + Q E + +G+N LG G + P+ + LK + V + H++
Sbjct: 14 KVQQKTRQITEGRAFSFGSNGYGQLGLGHKNPVTRPKCIKGLKDHRVVLVACGRAHTLVA 73
Query: 78 SDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS 137
+DD +V+ G +LGL S+ + L + L + + +HS+ L G
Sbjct: 74 TDDLKVYGFGMNTEHQLGLDSQEFQHTEPALI--RSLTGLQIKQLAAGAEHSIALTDKGV 131
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTF 196
FV G QLGL PS P P+ LK ++ V G +H+ + S+ +VY F
Sbjct: 132 AFVWGCGKEGQLGLGTRPS---VPEPL---ELKVDIRIMSVSAGYYHTAIVSAEGKVYAF 185
Query: 197 GI-HAGQLGHSPVTVSSA 213
G GQLG T S+
Sbjct: 186 GDGRNGQLGLGNKTTQSS 203
>gi|47208715|emb|CAF91945.1| unnamed protein product [Tetraodon nigroviridis]
Length = 380
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 35 GTNANYNLGTGSQQTRDVPELLDS--LKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGG 92
G N+ LG G + R P L D+ LK +++ V H+ ++ DG V+ CG G
Sbjct: 1 GANSYGQLGHGDVEDRSAPRLCDTAPLKDGAVRVVAGGGGHTAVITGDGEVFVCGQNHRG 60
Query: 93 RLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLS 152
+LGLG + + + ++ V + D ++FL SG V CG N+F QLG+
Sbjct: 61 QLGLGHLADISALQRCPSLTHT----VTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGIG 116
Query: 153 PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHAGQLGHSPVTVS 211
P+ + SLK++ ++ V G H++ V S VY +G G L + T+
Sbjct: 117 QKPNFTAEVQVV--ESLKAA--VVSVAAGLRHALAVTDSGRVYQWG--RGLLSQAKRTLG 170
Query: 212 SASVIEPKVQATIIREDLPGFIFESNR 238
+SV P + + +PG +++R
Sbjct: 171 PSSV--PPHLGSTVPSPVPGLDQKTSR 195
>gi|359081977|ref|XP_003588239.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like [Bos
taurus]
Length = 338
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 13/193 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+VY G N LG G R L+ + IKQ+ S +++DG ++ G
Sbjct: 13 QVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGD 72
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++GL + +++ P ++ K ++ S HS F+ G ++ G +
Sbjct: 73 NSEGQIGLQNITNICVPHQVTIGKP-----ISWISCGYYHSAFVTTEGELYTFGEPESGK 127
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLGHSP 207
LGL PP +V+ +P+ S+ +I V CG H+VV + + VYTFG+ GQLG
Sbjct: 128 LGL--PPKLLVN-HKVPQLVPGISEKVIQVACGGGHTVVLTEKAVYTFGLGQFGQLGLGT 184
Query: 208 VTVSSASVIEPKV 220
T ++ EPKV
Sbjct: 185 FTFETS---EPKV 194
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 10/129 (7%)
Query: 81 GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
G+V++ G G+LGLG + ++F + K + S + S L G +F+
Sbjct: 12 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHK--IKQLSAGSNTSAALTEDGELFM 69
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-I 198
G NS Q+GL ++ +P + +P+ + CG +HS V + E+YTFG
Sbjct: 70 WGDNSEGQIGL-----QNITNICVPH-QVTIGKPISWISCGYYHSAFVTTEGELYTFGEP 123
Query: 199 HAGQLGHSP 207
+G+LG P
Sbjct: 124 ESGKLGLPP 132
>gi|417402228|gb|JAA47967.1| Hypothetical protein [Desmodus rotundus]
Length = 520
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 215
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 216 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 271
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 272 NLYSFGCPEYGQLGHN 287
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 168 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 227
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 228 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 283
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 284 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 343
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 344 DSQKRVFSWGFGGYGRLGHA 363
>gi|402853137|ref|XP_003891257.1| PREDICTED: protein RCC2 [Papio anubis]
gi|383419997|gb|AFH33212.1| protein RCC2 [Macaca mulatta]
gi|383419999|gb|AFH33213.1| protein RCC2 [Macaca mulatta]
gi|384948234|gb|AFI37722.1| protein RCC2 [Macaca mulatta]
gi|387541966|gb|AFJ71610.1| protein RCC2 [Macaca mulatta]
Length = 523
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 162 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 218
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 219 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 274
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 275 NLYSFGCPEYGQLGHN 290
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 171 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 230
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 231 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 286
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 287 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 346
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 347 DSQKRVFSWGFGGYGRLGHA 366
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG N LG G++ P+L+ +L +I V + H ++D G V+S G G
Sbjct: 233 LYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGV 292
Query: 91 GGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G+ S + PKK+ F + ++ +A + + ++ + G ++ G + QL
Sbjct: 293 FGQLGHGNVKSYLHPKKIQQFVELNER--IAQVACGSNFTMVRSVQGLLYAFGHGEYGQL 350
Query: 150 GLSPPPSHI---------VSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
G + H+ PI SL+ ++ + V CG H++V + EVY +G
Sbjct: 351 GSTEETQHLDFGGRDNHFKYSIPIVVKSLE-TKKIKNVACGHLHTIVVTDENEVYQWG 407
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 52 VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPK 106
+P ++ SL+ IK V H++ V+D+ V+ G G G LGLG++ + P+
Sbjct: 372 IPIVVKSLETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQ 426
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 74 SVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLM 133
S V+ GR+++ G + G+LGLG+ +P+ + D + + V + H +
Sbjct: 224 SAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCG---RQHICAIT 280
Query: 134 LSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-E 192
G V+ GL F QLG S++ P I + ++ ++ + V CG ++V S +
Sbjct: 281 DQGEVYSWGLGVFGQLGHGNVKSYL-HPKKI-QQFVELNERIAQVACGSNFTMVRSVQGL 338
Query: 193 VYTFGI-HAGQLGHSPVT 209
+Y FG GQLG + T
Sbjct: 339 LYAFGHGEYGQLGSTEET 356
>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 591
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 12 IDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDK 71
I H+ + V+ E Y+WG + +LG + P + +L +
Sbjct: 246 ITHIACNENHSVAVADNGEAYVWGRGIDGSLGVEGDKHVS-PTQIHALDGKRVVHAACGA 304
Query: 72 FHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVF 131
++FV + G V++CG+ + G+LG+GS ++ P + ++ + + H+V
Sbjct: 305 AFTLFVIESGEVYACGNNEHGQLGIGSNEAMSEPTLVTNLPER----IVRIACGNSHAVA 360
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-S 190
L +G ++ G +S QLG+ P +SP + + ++ + CG H+++ S S
Sbjct: 361 LSETGRLYAWGAHSSGQLGVGEPLEDRLSPVRVESNVVRDD--VADFACGGNHTIILSNS 418
Query: 191 REVYTFGIHA-GQLGHSPVTVSSASV 215
+Y FG A GQLG P+ + +
Sbjct: 419 GLLYAFGSGAQGQLGLGPLATKNQAT 444
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 117/291 (40%), Gaps = 80/291 (27%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM------------------- 69
++VY WG LG G + P ++++L IK +C+
Sbjct: 159 SDVYTWGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMALAVSGEVYSWGL 218
Query: 70 ------------DKF---------------------HSVFVSDDGRVWSCGHGQGGRLGL 96
D+F HSV V+D+G + G G G LG+
Sbjct: 219 GLGGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWGRGIDGSLGV 278
Query: 97 GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPS 156
+ VSP +++ K V A+ ++F++ SG V+ CG N QLG
Sbjct: 279 EGDKH-VSPTQIHALDGKR---VVHAACGAAFTLFVIESGEVYACGNNEHGQLG------ 328
Query: 157 HIVSPTPIPRSSLKSSQP--LIGVCCGRFHSVVYS-SREVYTFGIH-AGQLGHSPVTVSS 212
I S + +L ++ P ++ + CG H+V S + +Y +G H +GQLG
Sbjct: 329 -IGSNEAMSEPTLVTNLPERIVRIACGNSHAVALSETGRLYAWGAHSSGQLGVGEPLEDR 387
Query: 213 ASVIEPKVQATIIREDLPGF-------IFESNRGTKHSF----TAETSLGP 252
S + +V++ ++R+D+ F I SN G ++F + LGP
Sbjct: 388 LSPV--RVESNVVRDDVADFACGGNHTIILSNSGLLYAFGSGAQGQLGLGP 436
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N + LG GS + P L+ +L ++ C + H+V +S+ GR+++ G
Sbjct: 315 EVYACGNNEHGQLGIGSNEAMSEPTLVTNLPERIVRIACGNS-HAVALSETGRLYAWGAH 373
Query: 90 QGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG+G +SP ++ +D VA + +H++ L SG ++ G + Q
Sbjct: 374 SSGQLGVGEPLEDRLSPVRVESNVVRDD--VADFACGGNHTIILSNSGLLYAFGSGAQGQ 431
Query: 149 LGLSPPPS-HIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
LGL P + + +P +P + + CG+ S S R ++YT+G
Sbjct: 432 LGLGPLATKNQATPAALPN---PEGRKYTAISCGQDISAAVSDRGKIYTWG 479
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 22/136 (16%)
Query: 10 RPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTG----SQQTRDVPELLDSLKRASIK 65
R +D + +DR+ ++V+I G A N TG SQ PE L
Sbjct: 95 RTLDIICKDRR-------EHDVWISGLQALVNRATGDIDLSQLRATAPETDQKL------ 141
Query: 66 QVCMDKFHS-VFVSDDGR-VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
QV +DK + V + +D V++ G G G LG G E SP+ + D + M
Sbjct: 142 QVVIDKGSTRVLIREDASDVYTWGEGTRGMLGHGEEDPEASPRVVEALLGHD---IKMLC 198
Query: 124 ISQDHSVFLMLSGSVF 139
+ H++ L +SG V+
Sbjct: 199 LGSGHTMALAVSGEVY 214
>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
latipes]
Length = 531
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 8/179 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV++ G N + LGTG Q+ VP+ LD L I + H + ++DG +++ G
Sbjct: 41 DEVFVLGLNCSNCLGTGDSQSTIVPKKLDFLNGRKIVSLSYGSGPHVLMATEDGELFAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
H +LG G+ + V+P ++ K V + HS+ L SG V+ G N+
Sbjct: 101 HNGYSQLGNGTTNQGVAPVLVSANMLNKK--VVEVACGSHHSMALTDSGEVYAWGYNNCG 158
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP SS ++ +G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 159 QVGSGSTANQ---PTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLG 214
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 9/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E++ WG N LG G+ P L+ + + + +V HS+ ++D G V++ G+
Sbjct: 95 ELFAWGHNGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMALTDSGEVYAWGY 154
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P++++ ++K+ V + Q S+ ++ +G V+ G N Q
Sbjct: 155 NNCGQVGSGSTANQPTPRRVS-SCLQNKVAVGIVC-GQTSSLAVVDNGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV-YTFGIHA-GQLG 204
LGL + + TP +L+ ++ + CG H + S V Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPCRLVALQ-GLCVLQIVCGYAHCLALSDEGVLYAWGSNTYGQLG 266
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P L +L+ + Q+ H + +SD+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPCRLVALQGLCVLQIVCGYAHCLALSDEGVLYAWGSN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++S+ +SP ++ EK++
Sbjct: 261 TYGQLGTGNKSNQLSPVQIMSEKER 285
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 74 SVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLM 133
+V+V+ D V+ G LG G S + PKKL+F + V+++ S H +
Sbjct: 34 AVYVTHDDEVFVLGLNCSNCLGTGDSQSTIVPKKLDFLNGRKI--VSLSYGSGPHVLMAT 91
Query: 134 LSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SRE 192
G +F G N + QLG + + V+P + + L ++ ++ V CG HS+ + S E
Sbjct: 92 EDGELFAWGHNGYSQLG-NGTTNQGVAPVLVSANML--NKKVVEVACGSHHSMALTDSGE 148
Query: 193 VYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATII 225
VY +G + GQ+G + P +S ++ KV I+
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVGIV 187
>gi|29789090|ref|NP_061185.1| protein RCC2 [Homo sapiens]
gi|209969703|ref|NP_001129676.1| protein RCC2 [Homo sapiens]
gi|71152033|sp|Q9P258.2|RCC2_HUMAN RecName: Full=Protein RCC2; AltName: Full=RCC1-like protein TD-60;
AltName: Full=Telophase disk protein of 60 kDa
gi|27526613|emb|CAD13148.1| RCC1-like protein [Homo sapiens]
gi|31753208|gb|AAH53908.1| RCC2 protein [Homo sapiens]
gi|55250899|gb|AAH42141.1| Regulator of chromosome condensation 2 [Homo sapiens]
gi|119615244|gb|EAW94838.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
sapiens]
gi|119615245|gb|EAW94839.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
sapiens]
gi|168270564|dbj|BAG10075.1| regulator of chromosome condensation 2 [synthetic construct]
gi|410215858|gb|JAA05148.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410262104|gb|JAA19018.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410298210|gb|JAA27705.1| regulator of chromosome condensation 2 [Pan troglodytes]
gi|410341591|gb|JAA39742.1| regulator of chromosome condensation 2 [Pan troglodytes]
Length = 522
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 217
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 273
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 274 NLYSFGCPEYGQLGHN 289
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 170 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 229
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 230 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 285
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 286 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 345
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 346 DSQKRVFSWGFGGYGRLGHA 365
>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
musculus]
Length = 1039
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRA-SIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G RD + A +IKQ+ S +++DG+++ G
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDN 205
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL +S+V P ++ K ++ S HS F+ + G ++ G +L
Sbjct: 206 SEGQIGLEDKSNVCIPHEVTVGKP-----ISWISCGYYHSAFVTMDGELYTFGEPENGKL 260
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ L + +I V CG H+VV + + VY FG+ GQ G +
Sbjct: 261 GL---PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKVVYAFGL--GQFGQLGLG 315
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKG 263
EPK+ I + I + G H+ E L FG G GK G
Sbjct: 316 TFLFETSEPKIIERIKDQK----ICHISCGENHTALMTELGLLYTFGDGRHGKLG 366
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ +D G V++ G
Sbjct: 92 NKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGG 151
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++ F D + S + S L G +F+ G NS Q
Sbjct: 152 NNEGQLGLGDTDDRDTFHQIVFFTPADT--IKQLSAGANTSAALTEDGKLFMWGDNSEGQ 209
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL S++ P + +P+ + CG +HS V E+YTFG G+LG
Sbjct: 210 IGLE-DKSNVCIP-----HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLG 261
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+++++ P K L EK V +A+
Sbjct: 80 CGDE-HTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK------VKLAAC 132
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ +G V+ G N+ QLGL
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGL 159
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 11/185 (5%)
Query: 31 VYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG+ ++ LG ++ +P+ +D L I QV +HS+ ++ DGRV+S G
Sbjct: 110 VFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKN 169
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG +V S + K D + +A + HS L SG+ + G N+ QL
Sbjct: 170 NHGQLGLG--ENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQL 227
Query: 150 GLS---PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
LS I P I LK Q + + CG H+ V + +V+TFG + +GQLG
Sbjct: 228 ALSGKKESAEQISKPFSI--GELKRLQ-VTYISCGDEHTAVLTQDGKVFTFGSNDSGQLG 284
Query: 205 HSPVT 209
++
Sbjct: 285 RQLIS 289
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 109/250 (43%), Gaps = 20/250 (8%)
Query: 32 YIWGTNANYNLGTGS---QQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
Y WG N++ LG + + R V SL ++ Q + HS+ + DG VWSCG
Sbjct: 3 YCWGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCG 62
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+LG P ++ + +D + V S ++HS+ + G VF G S
Sbjct: 63 NNSCGQLGRKRCQKHGRPAQIQALETQDIVSV---SCGKEHSLAICKEGRVFSWGSGSDG 119
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
QLG+ P I SS +I V CG +HS+ + V+++G + GQLG
Sbjct: 120 QLGIREFKKLSSIPKKIDE---LSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGL 176
Query: 206 SPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKR 265
S AS P+ ++ + +P + + G HSF S G +G G
Sbjct: 177 GENVPSQAS---PQWVKSL--DGIP--LAQVAAGGAHSFALSFS-GTSYGWGRNNAGQLA 228
Query: 266 LRSKLEAVKQ 275
L K E+ +Q
Sbjct: 229 LSGKKESAEQ 238
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ G N+ LG Q P + +L+ I V K HS+ + +GRV+S G G
Sbjct: 58 VWSCGNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGS 117
Query: 91 GGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG+ + S PKK++ + + S HS+ L G VF G N+ QL
Sbjct: 118 DGQLGIREFKKLSSIPKKID---ELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQL 174
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHSP 207
GL SP + SL PL V G HS S S Y +G +AGQL S
Sbjct: 175 GLGENVPSQASPQWV--KSLDGI-PLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSG 231
Query: 208 VTVSSASVIEP 218
S+ + +P
Sbjct: 232 KKESAEQISKP 242
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 18/200 (9%)
Query: 10 RPIDHLIRDRKIDVSSNQFN--------EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLK 60
+ ID L + I VS ++ V+ WG N + LG G ++ P+ + SL
Sbjct: 134 KKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLD 193
Query: 61 RASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGL-GSESSVVSPKKLNFEKDKDKLGV 119
+ QV HS +S G + G G+L L G + S K + +L V
Sbjct: 194 GIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQV 253
Query: 120 AMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVC 179
S +H+ L G VF G N QLG ++S P+ + S+ +
Sbjct: 254 TYISCGDEHTAVLTQDGKVFTFGSNDSGQLG-----RQLISGMKGPQV-VDSAVSFSQIA 307
Query: 180 CGRFHSVVYSSR--EVYTFG 197
CG +H++ YS +V +FG
Sbjct: 308 CGSYHTLAYSCTTGQVISFG 327
>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 1
gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Mus musculus]
Length = 531
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 18 DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVF 76
+ I V+ N +EV+++G N + LGTG Q+ VP+ L++L IK + H +
Sbjct: 32 NEAIYVTDN--DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLL 89
Query: 77 VSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLS 135
++DG V++ GH +LG G+ + ++P ++ K + VA S HS+ L
Sbjct: 90 TTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGS---HHSMALAAD 146
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVY 194
G +F G N+ Q+G + PTP ++ ++ ++ + CG+ S+ V S EVY
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQ---PTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY 203
Query: 195 TFGIHA-GQLG 204
+G + GQLG
Sbjct: 204 GWGYNGNGQLG 214
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG GS+++++SP ++ EK++
Sbjct: 261 TYGQLGTGSKNNLLSPTQIMVEKER 285
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E++ WG N +G+GS + P ++ + L + + + S+ V D G V+ G+
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SPT I
Sbjct: 265 LG-TGSKNNLLSPTQI 279
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + SI++ C+ +++V+D+ V+ G LG G S + PKKL E
Sbjct: 12 LLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKL--E 69
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
K +++ S H + G V+ G N + QLG + + ++P + + L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLG-NGTTNQGIAPVQVCTNLL-- 126
Query: 172 SQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ +I V CG HS+ ++ E++ +G + GQ+G
Sbjct: 127 IKQVIEVACGSHHSMALAADGELFAWGYNNCGQVG 161
>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
catus]
Length = 993
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 10/176 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y++G+N LG GS+ T P + +LK +K + H++ ++ G+V++ G
Sbjct: 56 LYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNN 115
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG + ++F + K + S + S L G +F+ G NS Q+G
Sbjct: 116 EGQLGLGDTEERNTFHLISFFTSQHK--IKQLSAGSNTSAALTEDGELFMWGDNSEGQIG 173
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
L V+ +P+ + +P+ + CG +HS V + E+YTFG +G+LG
Sbjct: 174 LKD-----VTNVCVPQ-QVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLG 223
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 19 RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFV 77
R + S + +VY G N LG G + R+ L+ + IKQ+ S +
Sbjct: 96 RNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISFFTSQHKIKQLSAGSNTSAAL 155
Query: 78 SDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS 137
++DG ++ G G++GL ++V P+++ K ++ S HS F+ G
Sbjct: 156 TEDGELFMWGDNSEGQIGLKDVTNVCVPQQVTVGKP-----ISWISCGYYHSAFVTTEGE 210
Query: 138 VFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
++ G +LGL P+ ++ +P+ + ++ V CG H+VV + + VYTFG
Sbjct: 211 LYTFGEPESGKLGL---PNQLLCNHRMPQPVPGIPEKVVQVACGGGHTVVLTEKAVYTFG 267
Query: 198 I-HAGQLG 204
+ GQLG
Sbjct: 268 LGQFGQLG 275
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+S+V P K L EK V A+
Sbjct: 42 CGDE-HTAVVTGNKKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEK------VKFAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGL 121
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 31 VYIWGTNANYNLGTGSQQ-TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY +G LG G+ VP++++ +K I + + H+ ++D G +++ G G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKVIEHVKDQKISSISCGENHTALITDIGLMYTFGDG 322
Query: 90 QGGRLGLGSES 100
+ G+LGLG E+
Sbjct: 323 RYGKLGLGLEN 333
>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
porcellus]
Length = 531
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L++L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
H +LG G+ + ++P ++ + V + HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGIAPIQVCTNLLIKQ--VVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V S EVY +G + GQLG
Sbjct: 159 QVGSGSTANQ---PTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLG 214
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 51/85 (60%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L R + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPMRVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G+++++++P+ + EK++
Sbjct: 261 TYGQLGTGNKNNLLNPEHIMVEKER 285
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ SG V+ G N Q
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACG---QTSSMAVLDSGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPMRVAALHRV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P ++ + L + + + S+ V D G V+ G+
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ ++ V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPMRV---AALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPP-----PSHIV 159
LG P HI+
Sbjct: 265 LGTGNKNNLLNPEHIM 280
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+D+ V+ G LG G S + PKKL
Sbjct: 12 LLSPQEVASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKL--- 68
Query: 112 KDKDKLGVAMASISQDHSVFLMLS---GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
+ G + S+S ++LS G V+ G N + QLG I PI +
Sbjct: 69 --EALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGI---APIQVCT 123
Query: 169 LKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ ++ V CG HS+ ++ EV+ +G + GQ+G
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG 161
>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
Length = 531
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ LD+L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLDALCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + ++P ++ K + VA S HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGS---HHSMALAADGEVFAWGYNNC 157
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 158 GQVGSGSTANQ---PTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG---QTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++++++SP + EK++
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P ++ + L + + + S+ V D+G V+ G+
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SP I
Sbjct: 265 LG-TGNKNNLLSPAHI 279
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+D V+ G LG G S + PKKL
Sbjct: 12 LLSPQEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKL--- 68
Query: 112 KDKDKL-GVAMASISQDHSVFLMLS---GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS 167
D L G + S+S ++LS G V+ G N + QLG + + ++P + +
Sbjct: 69 ---DALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTTNQGLAPIQVCTN 124
Query: 168 SLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
L + ++ V CG HS+ ++ EV+ +G + GQ+G
Sbjct: 125 LL--IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG 161
>gi|292628008|ref|XP_694032.3| PREDICTED: secretion-regulating guanine nucleotide exchange factor
[Danio rerio]
Length = 448
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 12 IDHLIRDRKIDVSSNQFNE----VYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQ 66
+ H+I R + +Q ++ +Y WG N+ LG G+ + + P +S L+ I+
Sbjct: 41 LRHVISWRLNLMEGDQLSKCVSLLYTWGANSYGQLGQGNAEDQAEPRRAESGLQEEQIRA 100
Query: 67 VCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ 126
V HS +SD G + CG G+LGLG +++ + V S
Sbjct: 101 VTGGGGHSALISDSGELLVCGQNHKGQLGLGHTLEIMTFQTCPLPGFGR---VQQVSCGW 157
Query: 127 DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS-SQPLIGVCCGRFHS 185
D ++ L G V CG N+F QLG+S +H P LKS +P+ V G H+
Sbjct: 158 DFTIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLL-----LKSFHEPVTSVAAGLRHA 212
Query: 186 VV-YSSREVYTFG 197
+ +S VY +G
Sbjct: 213 LASTASGCVYQWG 225
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G
Sbjct: 105 EVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGC 164
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ ++++ V +A Q S+ ++ SG V+V G N Q
Sbjct: 165 NNSGQVGSGSTANQPIPRRVT-GCLQNRVVVNIAC-GQMCSMAVVDSGEVYVWGYNGNGQ 222
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL +H TP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 223 LGLGSSGNH---STPCRIAALQGIR-VQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTG 278
Query: 206 --------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 279 NKSNQSYPTPVVVEKDRIIE 298
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 51 DEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKI--ACLSYGSGPHIVLATTEGEVFT 108
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + P ++ +K + VA S HS+ L G VF G N
Sbjct: 109 WGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGCN 165
Query: 145 SFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA- 200
+ Q+G S + PIPR + ++ ++ + CG+ S+ V S EVY +G +
Sbjct: 166 NSGQVG-----SGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGN 220
Query: 201 GQLG 204
GQLG
Sbjct: 221 GQLG 224
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++++ + ++ G G LGLG S + P++L+ K
Sbjct: 31 IRQACV--FGSAGNEVLYMTVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIAC 88
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N+++QLG + +H P I S+ S++ +I V
Sbjct: 89 LSYG--SGPHIVLATTEGEVFTWGHNAYNQLG-NGTTNHGSVPCHI--STNLSNKQVIEV 143
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
CG +HS+V +S EV+ +G ++GQ+G
Sbjct: 144 ACGSYHSLVLTSDGEVFAWGCNNSGQVG 171
>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_a [Mus musculus]
Length = 531
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 18 DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVF 76
+ I V+ N +EV+++G N + LGTG Q+ VP+ L++L IK + H +
Sbjct: 32 NEAIYVTDN--DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLL 89
Query: 77 VSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLS 135
++DG V++ GH +LG G+ + ++P ++ K + VA S HS+ L
Sbjct: 90 TTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGS---HHSMALAAD 146
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVY 194
G +F G N+ Q+G + PTP ++ ++ ++ + CG+ S+ V S EVY
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQ---PTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY 203
Query: 195 TFGIHA-GQLG 204
+G + GQLG
Sbjct: 204 GWGYNGNGQLG 214
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG GS+++++SP ++ EK++
Sbjct: 261 TYGQLGTGSKNNLLSPTQIMVEKER 285
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E++ WG N +G+GS + P ++ + L + + + S+ V D G V+ G+
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SPT I
Sbjct: 265 LG-TGSKNNLLSPTQI 279
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + SI++ C+ +++V+D+ V+ G LG G S + PKKL E
Sbjct: 12 LLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKL--E 69
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
K +++ S H + G V+ G N + QLG + + ++P + + L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLG-NGTTNQGIAPVQVCTNLL-- 126
Query: 172 SQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ +I V CG HS+ ++ E++ +G + GQ+G
Sbjct: 127 IKQVIEVACGSHHSMALAADGELFAWGYNNCGQVG 161
>gi|47085959|ref|NP_998341.1| protein RCC2 homolog [Danio rerio]
gi|71152032|sp|Q6NYE2.1|RCC2_DANRE RecName: Full=Protein RCC2 homolog
gi|42744570|gb|AAH66628.1| Zgc:77115 [Danio rerio]
Length = 495
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 15/139 (10%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG---VAMASISQDHS 129
HS+ ++ +G++WS G G+LG G + +PK + + LG + A+ ++H+
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLI------EGLGEEVIVAAACGRNHT 187
Query: 130 VFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVY 188
+ L +G+V+ G N QLG ++SP I + QP++ V CG F +V
Sbjct: 188 LALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQY----NGQPIVKVACGAEFSMIVD 243
Query: 189 SSREVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 244 CKGNLYSFGCPEYGQLGHN 262
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P+L++ L I + H++ ++++G V++ G
Sbjct: 143 KLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGEN 202
Query: 90 QGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LG G+++ +V+SP + + + + + S+ + G+++ G + Q
Sbjct: 203 KLGQLGQGNQTDAVLSPATIQYNGQP----IVKVACGAEFSMIVDCKGNLYSFGCPEYGQ 258
Query: 149 LGLSPPPSHIVSPTP-------IPR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I IPR K Q L V CG H++V
Sbjct: 259 LGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVL 318
Query: 189 SS-REVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 319 DSQKRVFSWGFGGYGRLGHA 338
>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 416
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ T P + +LK +K + H++ ++ G+V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERSTFHLISFFTSQRK--IKQLSAGSNTSAALTEDGELFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL V+ +P+ + +P+ + CG +HS V + ++YTFG G+LG
Sbjct: 172 IGLEN-----VTNVCVPQ-QVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLG 223
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 15/192 (7%)
Query: 10 RPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM 69
R I L + + E+++WG N+ +G + VP+ + K I +
Sbjct: 140 RKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGK--PISWISC 197
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVS--PKKLNFEKDKDKLGVAMASISQD 127
+HS FV+ +G++++ G + G+LGL ++ V P+ + K V +
Sbjct: 198 GYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGK----VVQVACGGG 253
Query: 128 HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS-SLKSSQPLIGVCCGRFHSV 186
H+V L +V+ GL F QLGL + T +P++ Q + + CG H+
Sbjct: 254 HTVVLT-EKAVYTFGLGQFGQLGLGT----FLFETSVPKAIEHIKDQKISFIACGENHTA 308
Query: 187 VYSSREV-YTFG 197
+ + + YTFG
Sbjct: 309 LITDMGLMYTFG 320
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 50 RDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---K 106
DVP L C D+ H+ V+ + +++ G G+LGLGS+S+V P K
Sbjct: 34 NDVPTFLS----------CGDE-HTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVK 82
Query: 107 KLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
L EK V A+ ++H++ G V+ G N+ QLGL
Sbjct: 83 ALKPEK------VKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGL 121
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY +G LG G+ VP+ ++ +K I + + H+ ++D G +++ G G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Query: 90 QGGRLGLGSESSV 102
+ G+LGLG E+S
Sbjct: 323 RHGKLGLGLENST 335
>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
Length = 531
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 18 DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVF 76
+ I V+ N +EV+++G N + LGTG Q+ VP+ L++L IK + H +
Sbjct: 32 NEAIYVTDN--DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLL 89
Query: 77 VSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLS 135
++DG V++ GH +LG G+ + ++P ++ K + VA S HS+ L
Sbjct: 90 TTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGS---HHSMALAAD 146
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVY 194
G +F G N+ Q+G + PTP ++ ++ ++ + CG+ S+ V S EVY
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQ---PTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVY 203
Query: 195 TFGIHA-GQLG 204
+G + GQLG
Sbjct: 204 GWGYNGNGQLG 214
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG GS+++++SP ++ EK++
Sbjct: 261 TYGQLGTGSKNNLLSPTQIMVEKER 285
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E++ WG N +G+GS + P ++ + L + + + S+ V D G V+ G+
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SPT I
Sbjct: 265 LG-TGSKNNLLSPTQI 279
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + SI++ C+ +++V+D+ V+ G LG G S + PKKL E
Sbjct: 12 LLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKL--E 69
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
K +++ S H + G V+ G N + QLG + + ++P + + L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLG-NGTTNQGIAPVQVCTNLL-- 126
Query: 172 SQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ +I V CG HS+ ++ E++ +G + GQ+G
Sbjct: 127 IKQVIEVACGSHHSMALAADGELFAWGYNNCGQVG 161
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 28/205 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E++ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 189 EIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 248
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ P+++ ++K+ V +A Q SV ++ +G V+V G N Q
Sbjct: 249 NNSGQVGSGSTANQPIPRRVT-GCLQNKVVVNIA-CGQMCSVAVVDNGEVYVWGYNGNGQ 306
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVC-----CGRFHSVVYSSR-EVYTFGIHA-G 201
LGL + TP ++L+ G+C CG H++V + +VY +G ++ G
Sbjct: 307 LGLGSSGNQ---STPCRIAALQ------GICVQRVACGYAHTLVLTDEGQVYVWGANSYG 357
Query: 202 QLGH---------SPVTVSSASVIE 217
QLG +PV V +IE
Sbjct: 358 QLGTGNKSNQSYPTPVAVEKDRIIE 382
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 20/185 (10%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF----HSVFVSDDGRVW 84
+E+++ GTN LG G Q+ P LDSL S K++ + H + + +G ++
Sbjct: 135 DEIFVLGTNCCGCLGLGDIQSTIEPRRLDSL---SGKKIACFSYGSGPHVILATTEGEIF 191
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
+ GH +LG G+ + + P ++ +K + VA S HS+ L G VF G
Sbjct: 192 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGY 248
Query: 144 NSFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA 200
N+ Q+G S + PIPR + ++ ++ + CG+ SV V + EVY +G +
Sbjct: 249 NNSGQVG-----SGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNG 303
Query: 201 -GQLG 204
GQLG
Sbjct: 304 NGQLG 308
>gi|403303318|ref|XP_003942281.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 531
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L+ L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
H +LG G+ + V+P ++ K V + HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGVAPIQVCTNLLIKK--VVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 159 QVGSGSTANQ---PTPRKVTNCLHFKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKKVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHFKRVVGIACG---QTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G+++++++P + EK++
Sbjct: 261 TYGQLGTGNKNNLLNPAHIMVEKER 285
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+DD V+ G LG G S + PKKL
Sbjct: 12 LLSPQEIASIRKACVFGTSANEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKL--- 68
Query: 112 KDKDKLGVAMASISQDHSVFLMLS---GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
+ G + S+S ++LS G V+ G N + QLG + + V+P + +
Sbjct: 69 --EGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTTNQGVAPIQVCTNL 125
Query: 169 LKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
L + ++ V CG HS+ ++ EV+ +G + GQ+G
Sbjct: 126 L--IKKVVEVACGSHHSMALAADGEVFAWGYNNCGQVG 161
>gi|270015228|gb|EFA11676.1| hypothetical protein TcasGA2_TC008540 [Tribolium castaneum]
Length = 835
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 31 VYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG+N LG G Q P+++ +L + QV ++H++ +S G V++ G G
Sbjct: 432 VYAWGSNTYGQLGLGPLIQESPYPQIITNLAFKKMVQVSAGQYHTIALSSSGEVYTWGWG 491
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G ++ PK L F+ V + HS+ L G +F G N F QL
Sbjct: 492 IHGQLGHGDCDNIYYPKLLPFQHK-----VVQVAAGHAHSLILTREGKLFGFGSNVFGQL 546
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG 197
S+ + + P+ + G FH++ V + +EVYT+G
Sbjct: 547 EYCQLDSNKSTRPVLILIMPDIYTPIEKIATGYFHNIAVRADQEVYTWG 595
>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
musculus]
gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
Length = 972
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRA-SIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G RD + A +IKQ+ S +++DG+++ G
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDN 205
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL +S+V P ++ K ++ S HS F+ + G ++ G +L
Sbjct: 206 SEGQIGLEDKSNVCIPHEVTVGKP-----ISWISCGYYHSAFVTMDGELYTFGEPENGKL 260
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ L + +I V CG H+VV + + VY FG+ GQ G +
Sbjct: 261 GL---PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKVVYAFGL--GQFGQLGLG 315
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKG 263
EPK+ I + I + G H+ E L FG G GK G
Sbjct: 316 TFLFETSEPKIIERIKDQK----ICHISCGENHTALMTELGLLYTFGDGRHGKLG 366
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ +D G V++ G
Sbjct: 92 NKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGG 151
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++ F D + S + S L G +F+ G NS Q
Sbjct: 152 NNEGQLGLGDTDDRDTFHQIVFFTPADT--IKQLSAGANTSAALTEDGKLFMWGDNSEGQ 209
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL S++ P + +P+ + CG +HS V E+YTFG G+LG
Sbjct: 210 IGLE-DKSNVCIP-----HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLG 261
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+++++ P K L EK V +A+
Sbjct: 80 CGDE-HTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK------VKLAAC 132
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ +G V+ G N+ QLGL
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGL 159
>gi|7959201|dbj|BAA95994.1| KIAA1470 protein [Homo sapiens]
Length = 564
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 203 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 259
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 260 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 315
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 316 NLYSFGCPEYGQLGHN 331
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 212 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 271
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 272 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 327
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 328 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 387
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 388 DSQKRVFSWGFGGYGRLGHA 407
>gi|350585688|ref|XP_003482025.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Sus scrofa]
Length = 458
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V P+ L + + A+ ++H++ L
Sbjct: 97 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEXPRLLEGLSHEV---IVSAACGRNHTLLL 153
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 154 PETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 209
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 210 NLYSFGCPEYGQLGHN 225
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P LL+ L I + H++ + + G V++ G
Sbjct: 106 KLWSWGRNEKGQLGHGDTKRVEXPRLLEGLSHEVIVSAACGRNHTLLLPETGSVFAFGEN 165
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 166 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 221
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 222 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 281
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 282 DSQKRVFSWGFGGYGRLGHA 301
>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
musculus]
gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
Length = 557
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRA-SIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G RD + A +IKQ+ S +++DG+++ G
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDN 205
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL +S+V P ++ K ++ S HS F+ + G ++ G +L
Sbjct: 206 SEGQIGLEDKSNVCIPHEVTVGKP-----ISWISCGYYHSAFVTMDGELYTFGEPENGKL 260
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ L + +I V CG H+VV + + VY FG+ GQ G +
Sbjct: 261 GL---PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKVVYAFGL--GQFGQLGLG 315
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKG 263
EPK+ I + I + G H+ E L FG G GK G
Sbjct: 316 TFLFETSEPKIIERIKDQK----ICHISCGENHTALMTELGLLYTFGDGRHGKLG 366
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ +D G V++ G
Sbjct: 92 NKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGG 151
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++ F D + S + S L G +F+ G NS Q
Sbjct: 152 NNEGQLGLGDTDDRDTFHQIVFFTPADT--IKQLSAGANTSAALTEDGKLFMWGDNSEGQ 209
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL S++ P + +P+ + CG +HS V E+YTFG G+LG
Sbjct: 210 IGLE-DKSNVCIP-----HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLG 261
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++++WG N+ +G + +P + K I + +HS FV+ DG +++ G
Sbjct: 198 KLFMWGDNSEGQIGLEDKSNVCIPHEVTVGK--PISWISCGYYHSAFVTMDGELYTFGEP 255
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLG----VAMASISQDHSVFLMLSGSVFVCGLNS 145
+ G+LGL +E +N + LG V + H+V L V+ GL
Sbjct: 256 ENGKLGLPNE------LLMNHRSPQRVLGIPERVIQVACGGGHTVVLT-EKVVYAFGLGQ 308
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFG 197
F QLGL P I R Q + + CG H+ + + +YTFG
Sbjct: 309 FGQLGLGTFLFETSEPKIIER---IKDQKICHISCGENHTALMTELGLLYTFG 358
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+++++ P K L EK V +A+
Sbjct: 80 CGDE-HTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK------VKLAAC 132
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ +G V+ G N+ QLGL
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGL 159
>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1055
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 21/179 (11%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N+ +V+ WG LG G+ + +P L+ L I QV H + +S DG
Sbjct: 96 MAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDG 155
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
++++ G G+LGLG P KL + K G+ +A I+ DHS L LSG+VF
Sbjct: 156 QLFTWGQNTSGQLGLGKGE----PSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVF 211
Query: 140 VCGLNSFHQLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
G N QLGL+ P HI SQ ++ + CG H+ + +
Sbjct: 212 GWGKNKAGQLGLNDIQDRAVPCHI---------KFLRSQKVVHISCGDEHTAALTKVRI 261
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY G+N LG T PEL+ +L I V + HS+ V++ G+V++ G G
Sbjct: 54 VYTCGSNGCGQLGHNKPGTS--PELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGD 111
Query: 91 GGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GG+LGLG +E++V P+ + D +A H + L G +F G N+ QL
Sbjct: 112 GGQLGLGTTEAAVRIPRLIKRLCDHR---IAQVMCGNQHCIALSKDGQLFTWGQNTSGQL 168
Query: 150 GLSP-PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLG 204
GL PS + P P SL + PL + G HS S S V+ +G + AGQLG
Sbjct: 169 GLGKGEPSKLF---PQPLKSL-AGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLG 222
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HSVF+ DG V++CG G+LG + SP+ + D + + S Q HS+ +
Sbjct: 44 HSVFLLHDGSVYTCGSNGCGQLGHNKPGT--SPELVG---ALDTQRITLVSCGQAHSMAV 98
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
G VF G QLGL + + P I R + V CG H + S
Sbjct: 99 NEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKR---LCDHRIAQVMCGNQHCIALSKDG 155
Query: 192 EVYTFGIH-AGQLG 204
+++T+G + +GQLG
Sbjct: 156 QLFTWGQNTSGQLG 169
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 87 GHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G + G+LG+ E +S+ P+ N + G+ A HSVFL+ GSV+ CG N
Sbjct: 5 GKAKDGQLGIEVERNSMFEPRNCNVFSGR---GLKEAVCGGQHSVFLLHDGSVYTCGSNG 61
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHAGQLG 204
QLG + P + SP + +Q + V CG+ HS+ + + +V+ +G AG G
Sbjct: 62 CGQLGHNKPGT---SPELV---GALDTQRITLVSCGQAHSMAVNEQGQVFAWG--AGDGG 113
Query: 205 HSPVTVSSASVIEPKV 220
+ + A+V P++
Sbjct: 114 QLGLGTTEAAVRIPRL 129
>gi|348533602|ref|XP_003454294.1| PREDICTED: protein RCC2 homolog [Oreochromis niloticus]
Length = 494
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+F++ +G++WS G G+LG G + +PK + + + VA ++H++ L
Sbjct: 133 HSLFITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEALAEHVIVSVACG---RNHTLAL 189
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSR 191
G+V+ G N QLG +++P I + QPL+ V CG F VV
Sbjct: 190 TEDGAVYSFGENKLGQLGQGNQTDAVLTPALISY----NGQPLVKVACGAEFSMVVDCKG 245
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 246 NLYSFGCPEYGQLGHN 261
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P+L+++L I V + H++ +++DG V+S G
Sbjct: 142 KLWSWGRNDKGQLGHGDTKRLEAPKLIEALAEHVIVSVACGRNHTLALTEDGAVYSFGEN 201
Query: 90 QGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LG G+++ +V++P +++ + + + S+ + G+++ G + Q
Sbjct: 202 KLGQLGQGNQTDAVLTPALISYNGQP----LVKVACGAEFSMVVDCKGNLYSFGCPEYGQ 257
Query: 149 LGLSPPPSHIVSPTP-------IPRSSL----KSSQPLI---------GVCCGRFHSVVY 188
LG + I IPR KS I V CG H++V
Sbjct: 258 LGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKSKDGQIMPVPNVVVRDVACGANHTLVL 317
Query: 189 SS-REVYTFGIHA-GQLGHS 206
S + V+T+G G+LGH+
Sbjct: 318 DSQKRVFTWGFGGYGRLGHT 337
>gi|148753311|gb|AAI42947.1| RCC2 protein [Homo sapiens]
Length = 457
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 96 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 152
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 153 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 208
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 209 NLYSFGCPEYGQLGHN 224
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 105 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 164
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 165 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 220
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 221 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 280
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 281 DSQKRVFSWGFGGYGRLGHA 300
>gi|355744958|gb|EHH49583.1| hypothetical protein EGM_00270, partial [Macaca fascicularis]
Length = 427
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 66 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 122
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 123 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 178
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 179 NLYSFGCPEYGQLGHN 194
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 75 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 134
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 135 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 190
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 191 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 250
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 251 DSQKRVFSWGFGGYGRLGHA 270
>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Ornithorhynchus anatinus]
Length = 806
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 10/179 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++Y+ G+N LG GS+ T + P + +LK +K + H++ ++ G V++ G
Sbjct: 141 KLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHTLVCTEGGNVYAAGGN 200
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG + +++F + K + S + S L G +++ G NS Q+
Sbjct: 201 SDGQLGLGDTEERTTFHQISFFTSRYK--IKQLSAGSNTSAALTEDGELYMWGDNSEGQI 258
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGHS 206
GL+ S++ P + +P+ V CG +HS +V + E+YTFG G+LG S
Sbjct: 259 GLA-SESNVCVPCRVV-----IGKPVSWVSCGYYHSALVTTDGELYTFGEPENGKLGLS 311
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 104/237 (43%), Gaps = 20/237 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N++ LG G + R + R IKQ+ S +++DG ++ G
Sbjct: 194 VYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALTEDGELYMWGDN 253
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL SES+V P ++ K V+ S HS + G ++ G +L
Sbjct: 254 SEGQIGLASESNVCVPCRVVIGKP-----VSWVSCGYYHSALVTTDGELYTFGEPENGKL 308
Query: 150 GLSPP--PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLGHS 206
GLS +H + P +P S K +Q V CG H+V + +VYTFG+ GQLG
Sbjct: 309 GLSSEQLKNHRI-PQLVPGISGKVNQ----VACGGGHTVALTEEDVYTFGLGEFGQLGLG 363
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKG 263
++ PKV + ++ + N + ++T L FG G GK G
Sbjct: 364 TCIFETSV---PKVVEHLRKQKIHYVACGENHT---ALISDTGLMYTFGDGRHGKLG 414
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E+Y+WG N+ +G S+ VP + + V +HS V+ DG +++ G
Sbjct: 246 ELYMWGDNSEGQIGLASESNVCVP--CRVVIGKPVSWVSCGYYHSALVTTDGELYTFGEP 303
Query: 90 QGGRLGLGSES--SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+LGL SE + P+ + K V + H+V L V+ GL F
Sbjct: 304 ENGKLGLSSEQLKNHRIPQLVPGISGK----VNQVACGGGHTVALT-EEDVYTFGLGEFG 358
Query: 148 QLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVYSSREV-YTFGI-HAGQL 203
QLGL + T +P+ L+ Q + V CG H+ + S + YTFG G+L
Sbjct: 359 QLGLGT----CIFETSVPKVVEHLR-KQKIHYVACGENHTALISDTGLMYTFGDGRHGKL 413
Query: 204 G 204
G
Sbjct: 414 G 414
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 19 RKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVS 78
+K ++ +N + + + A + G S+ ++P L+ ++ Q+ H+ FV+
Sbjct: 80 KKDELRANTYRKFRTRHSGAVFTFGK-SKFAENIPSKF-WLRNDTLAQLSCGDEHTAFVT 137
Query: 79 DDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
+ +++ G G+LGLGS+++V P K L EK V A+ ++H++
Sbjct: 138 GNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEK------VKFAACGRNHTLVCTEG 191
Query: 136 GSVFVCGLNSFHQLGL 151
G+V+ G NS QLGL
Sbjct: 192 GNVYAAGGNSDGQLGL 207
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 30 EVYIWGTNANYNLGTGSQQ-TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+VY +G LG G+ VP++++ L++ I V + H+ +SD G +++ G
Sbjct: 348 DVYTFGLGEFGQLGLGTCIFETSVPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGD 407
Query: 89 GQGGRLGLGSES 100
G+ G+LGLG E+
Sbjct: 408 GRHGKLGLGEEN 419
>gi|332801056|ref|NP_001095381.2| protein RCC2 [Bos taurus]
gi|151554348|gb|AAI47876.1| RCC2 protein [Bos taurus]
Length = 520
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEV---IVSAACGRNHTLAL 215
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 216 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 271
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 272 NLYSFGCPEYGQLGHN 287
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 168 KLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 227
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 228 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 283
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 284 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 343
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 344 DSQKRVFSWGFGGYGRLGHA 363
>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
Length = 534
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ +P+ L++L IK + H + ++DG V++ G
Sbjct: 48 DEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 107
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + ++P ++ K + VA S HSV L G VF G N+
Sbjct: 108 HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS---HHSVALAADGEVFAWGYNNC 164
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 165 GQVGSGSTANQ---PTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 221
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HSV ++ DG V++ G+
Sbjct: 103 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYN 162
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 163 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG---QTSSMAVLDNGEVYGWGYNGNGQ 219
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL +++ TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 220 LGLG---NNVNQLTPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 273
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 208 EVYGWGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 267
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++++++SP + EK++
Sbjct: 268 TYGQLGTGNKNNLLSPAHIMVEKER 292
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+D+ V+ G LG G S + PKKL
Sbjct: 19 LLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKL--- 75
Query: 112 KDKDKLGVAMASISQDHSVFLMLS---GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
+ G + S+S ++LS G V+ G N + QLG I PI +
Sbjct: 76 --EALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGI---APIQVCT 130
Query: 169 LKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ ++ V CG HSV ++ EV+ +G + GQ+G
Sbjct: 131 NLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVG 168
>gi|355557600|gb|EHH14380.1| hypothetical protein EGK_00297, partial [Macaca mulatta]
Length = 427
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 66 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 122
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 123 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 178
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 179 NLYSFGCPEYGQLGHN 194
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 75 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 134
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 135 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 190
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 191 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 250
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 251 DSQKRVFSWGFGGYGRLGHA 270
>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
Length = 1001
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRA-SIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G RD + A +IKQ+ S +++DG+++ G
Sbjct: 108 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDN 167
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL +S+V P ++ K ++ S HS F+ + G ++ G +L
Sbjct: 168 SEGQIGLEDKSNVCIPHEVTVGK-----PISWISCGYYHSAFVTMDGELYTFGEPENGKL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ L + +I V CG H+VV + + VY FG+ GQ G +
Sbjct: 223 GL---PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKVVYAFGL--GQFGQLGLG 277
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKG 263
EPK+ I + I + G H+ E L FG G GK G
Sbjct: 278 TFLFETSEPKIIERIKDQK----ICHISCGENHTALMTELGLLYTFGDGRHGKLG 328
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ +D G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++ F D + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTDDRDTFHQIVFFTPADT--IKQLSAGANTSAALTEDGKLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL S++ P + +P+ + CG +HS V E+YTFG G+LG
Sbjct: 172 IGLE-DKSNVCIPHEV-----TVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLG 223
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+++++ P K L EK V +A+
Sbjct: 42 CGDE-HTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ +G V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTDTGGVYAAGGNNEGQLGL 121
>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
GTPase regulator-like [Equus caballus]
Length = 915
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K V + H++ ++ G+V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSESPVSKPTCIKALKPEKVKFVACGRTHTIVATEGGKVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + + ++ F + K + S S L G +F+ G NS Q
Sbjct: 114 NSEGQLGLGDDEDRNTFHRIKFFTSQHK--IKQLSAGSSSSAALTEDGELFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG-IHAGQLG 204
+GL + +P + +P+ V CG +HS ++ E+YTFG +G+LG
Sbjct: 172 IGLKN-----IDNVCVPH-QVTIGKPISWVSCGYYHSAFITTEGELYTFGEPESGKLG 223
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 67 VCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMAS 123
C D+ H+ V+ + +++ G G+LGLGSES V P K L EK V +
Sbjct: 41 ACGDE-HTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIKALKPEK------VKFVA 93
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
+ H++ G V+ G NS QLGL
Sbjct: 94 CGRTHTIVATEGGKVYATGGNSEGQLGL 121
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
N VY +G LG G+ +T + P +++ +K I + + H+ ++D G +++
Sbjct: 261 NAVYTFGLGQFGQLGLGTFIFETSE-PTVIEHIKDQKISYISCGENHTALITDTGLIYTF 319
Query: 87 GHGQGGRLGLGSES 100
G G+ G+LGLG E+
Sbjct: 320 GDGRHGKLGLGLEN 333
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 86/192 (44%), Gaps = 19/192 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N LG G+ R P + L ++ + +H+ + G VW G
Sbjct: 328 GEVWCWGGNGFGQLGDGTTTARSTPAAVSGLPSG-VETIAAGDYHTCALMSSGGVWCWGR 386
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG G+ ++ +P ++ GV + H+ LM SG V+ GLN+ Q
Sbjct: 387 NNSGQLGDGTTTARSTPAAVSGLPS----GVTAIAAGGLHTCALMSSGGVWCWGLNNSGQ 442
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFG-IHAGQLGH- 205
LG S S TP+ S L S I G +H+ + SS V+ +G ++GQLG
Sbjct: 443 LG---DGSDTDSSTPVAVSGLASGVETIAA--GGWHTCALTSSGGVWCWGRNNSGQLGDG 497
Query: 206 ------SPVTVS 211
+PV VS
Sbjct: 498 STIYHITPVAVS 509
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 77/181 (42%), Gaps = 12/181 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N + LG GS P + L ++ + +H+ ++ G VW G
Sbjct: 432 VWCWGLNNSGQLGDGSDTDSSTPVAVSGLASG-VETIAAGGWHTCALTSSGGVWCWGRNN 490
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG GS ++P ++ GV + H+ L SG V+ G N QLG
Sbjct: 491 SGQLGDGSTIYHITPVAVSGLPS----GVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLG 546
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIH-AGQLGHSPV 208
TP+ S L S +I GRFH+ + SS V+ +G + GQLG
Sbjct: 547 DGTTTDR---STPVAVSGLTSGVTVIAA--GRFHTCALTSSGGVWCWGANFDGQLGDGTT 601
Query: 209 T 209
T
Sbjct: 602 T 602
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 13/187 (6%)
Query: 29 NEVYIWGTNANYNLGTGSQQ-TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
EV+ WG N LG G+ +R P + L + + H+ + G VW G
Sbjct: 225 GEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSG-MTAIAAGGLHTCALMSSGGVWCWG 283
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LG GS++ +P ++ GV + H+ L SG V+ G N F
Sbjct: 284 RNDSGQLGDGSDTDSSTPVAVSGLPS----GVTAIAAGDYHTCALTGSGEVWCWGGNGFG 339
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFG-IHAGQLGH 205
QLG + TP S L S I G +H+ + SS V+ +G ++GQLG
Sbjct: 340 QLG---DGTTTARSTPAAVSGLPSGVETIAA--GDYHTCALMSSGGVWCWGRNNSGQLGD 394
Query: 206 SPVTVSS 212
T S
Sbjct: 395 GTTTARS 401
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 12/181 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N + LG G+ R P + L + + +FH+ ++ G VW G
Sbjct: 534 VWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSG-VTVIAAGRFHTCALTSSGGVWCWGANF 592
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ ++ +P ++ GV + H+ L SG V+ G N + QLG
Sbjct: 593 DGQLGDGTTTNRTTPVAVSGLPS----GVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLG 648
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFG-IHAGQLGHSPV 208
+ TP S L S I G H+ + SS EV+ +G + GQLG
Sbjct: 649 DGTTTNR---STPGAVSGLPSGVTAIAA--GWEHTCALTSSGEVWCWGDNYYGQLGDGTT 703
Query: 209 T 209
T
Sbjct: 704 T 704
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 74/183 (40%), Gaps = 12/183 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V WG N LG G+ TR P + L + + +H+ ++ G V G
Sbjct: 74 VMCWGGNDFGQLGDGTPTTRSTPGAVSGLPSG-VTAIAAGNYHTCALTGSGGVRCWGANY 132
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G +P ++ GV + DH+ LM SG V G N + QLG
Sbjct: 133 SGQLGNGLTFGRSTPGAVSGLPS----GVTAIAAGGDHTCALMSSGGVMCWGDNYYGQLG 188
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHSPV 208
+ TP+ S L S I G H+ + S EV+ +G + GQLG
Sbjct: 189 DGTTTNR---RTPVAVSGLPSGVTAIAA--GGLHTCALTGSGEVWCWGYNYYGQLGDGTT 243
Query: 209 TVS 211
T S
Sbjct: 244 TYS 246
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N LG G+ R P + L + + H+ ++ G VW G
Sbjct: 634 GEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG-VTAIAAGWEHTCALTSSGEVWCWGD 692
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG G+ ++ +P ++ GV + H+ L SG V G N Q
Sbjct: 693 NYYGQLGDGTTTNRSTPGAVSGLPS----GVTAIAAGVYHTCALTGSGGVMCWGNNGDGQ 748
Query: 149 LGLSPP 154
LG P
Sbjct: 749 LGDGRP 754
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 23/243 (9%)
Query: 30 EVYIWGTN--ANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+V WG N L TG + + P +L L +VC HS+ ++ DGR++S G
Sbjct: 107 QVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWG 166
Query: 88 HGQGGRLGLGSESSVVS--PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G+LG+G+ + + P +L + + VA HS L +SGSVF G N
Sbjct: 167 DNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGF---HSFALTISGSVFGWGKND 223
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQL 203
QLGL + PT + SQ + + CG+ H+ + ++ V+ FG + GQL
Sbjct: 224 VGQLGLGNKENK-AYPTLLRN---MRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQL 279
Query: 204 GHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGP--EFGGGWTGK 261
GH S+ + + P+ ++ D I + G H+ E S G FG G G+
Sbjct: 280 GHG----SNYNEVNPRKVIDLMGSD----ITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQ 331
Query: 262 KGK 264
G+
Sbjct: 332 LGQ 334
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 23/243 (9%)
Query: 30 EVYIWGTN--ANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+V WG N L TG + + P +L L +VC HS+ ++ DGR++S G
Sbjct: 447 QVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWG 506
Query: 88 HGQGGRLGLGSESSVVS--PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G+LG+G+ + + P +L + + VA HS L +SGSVF G N
Sbjct: 507 DNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGF---HSFALTISGSVFGWGKND 563
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQL 203
QLGL + P +++ SQ + + CG+ H+ + ++ V+ FG + GQL
Sbjct: 564 VGQLGLGNKEN---KSYPTLLRNMR-SQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQL 619
Query: 204 GHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGP--EFGGGWTGK 261
GH S+ + + P+ ++ D I + G H+ E S G FG G G+
Sbjct: 620 GHG----SNYNEVNPRKVIDLMGSD----ITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQ 671
Query: 262 KGK 264
G+
Sbjct: 672 LGQ 674
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 16/180 (8%)
Query: 32 YIWGTNANYNLG---TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+ WG++ LG TG Q T++V + + +L ++ + K H+ V DDG ++ CG
Sbjct: 4 FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+ LG + + P +++ + + + + DH++ + G V G N Q
Sbjct: 64 NSKGQ--LGQDRNQYKPVQVS---ALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQ 118
Query: 149 LGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
GL+ + + P PR L S Q + VCCG HS+ + ++++G + GQLG
Sbjct: 119 CGLA---TGDIENKPRPRILKHLASYQ-FVKVCCGSLHSMALTRDGRLFSWGDNTYGQLG 174
>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Short=mRpgr; Flags: Precursor
Length = 1001
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRA-SIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G RD + A +IKQ+ S +++DG+++ G
Sbjct: 108 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDN 167
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL +S+V P ++ K ++ S HS F+ + G ++ G +L
Sbjct: 168 SEGQIGLEDKSNVCIPHEVTVGK-----PISWISCGYYHSAFVTMDGELYTFGEPENGKL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ L + +I V CG H+VV + + VY FG+ GQ G +
Sbjct: 223 GL---PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKVVYAFGL--GQFGQLGLG 277
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKG 263
EPK+ I + I + G H+ E L FG G GK G
Sbjct: 278 TFLFETSEPKIIERIKDQK----ICHISCGENHTALMTELGLLYTFGDGRHGKLG 328
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ +D G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++ F D + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTDDRDTFHQIVFFTPADT--IKQLSAGANTSAALTEDGKLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL S++ P + +P+ + CG +HS V E+YTFG G+LG
Sbjct: 172 IGLE-DKSNVCIPHEV-----TVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLG 223
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+++++ P K L EK V +A+
Sbjct: 42 CGDE-HTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ +G V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTDTGGVYAAGGNNEGQLGL 121
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 17/181 (9%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDG 81
+S + +V+ WG LG G P+L++ L+ I +V C +F S+ ++ DG
Sbjct: 618 LSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQF-SIAITKDG 676
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
+V+S G G RLG G+E V PK +N + K + VA+ S H + L SG V+
Sbjct: 677 QVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGST---HCLALTESGEVYSW 733
Query: 142 GLNS----FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
G N F L ++ P P+ +P S+ ++G+ CG S +SS ++ G
Sbjct: 734 GSNDQCQHFDTLRIAKP-----VPSVLPG---LDSKHIVGISCGPAQSFAWSSCSEWSIG 785
Query: 198 I 198
+
Sbjct: 786 L 786
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+V++WG N LG VP ++L ++ QV V+ +G+V++CG
Sbjct: 2963 TKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 3022
Query: 89 GQGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
GRLGLG S V P+++ + VA+ S + H+ L + G VF G
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR-HATALTVDGKVFSWGEGDDG 3081
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGH 205
+LG S + P +LK+ + + + CG HS + SS E+YT+G+ G+LGH
Sbjct: 3082 KLGHF---SRMNCDKPRLIEALKTKR-IRDIACGSSHSAAITSSGELYTWGLGEYGRLGH 3137
Query: 206 SPVTVSSASVIEPKVQATII 225
T ++PK+ ++
Sbjct: 3138 GDNTTQ----LKPKMVKVLL 3153
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 10/171 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM--DKFHSVFVSDDGRVWSCG 87
E+Y WG LG GS + + VP L+ LK + V ++ V+++G+VWS G
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWG 630
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G G+LG G +PK + +D D + V S S+ + G V+ G
Sbjct: 631 DGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGS---QFSIAITKDGQVYSWGKGDNQ 687
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFG 197
+LG H+ P + + L+ + ++ V G H + + S EVY++G
Sbjct: 688 RLG-HGTEEHVRYPKIM--NGLQGKK-VVDVAVGSTHCLALTESGEVYSWG 734
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V+ WG + LG S+ D P L+++LK I+ + HS ++ G +++ G G
Sbjct: 3071 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLG 3130
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ GRLG G ++ + PK + + VA S ++ L G VF G F +L
Sbjct: 3131 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDEGLVFSWGDGDFGKL 3189
Query: 150 G 150
G
Sbjct: 3190 G 3190
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCG 87
+ V+ WG LG G VP +DSL + +V C +F SV ++ G V++ G
Sbjct: 4177 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQF-SVALTKSGAVYTWG 4235
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G RLG GS+ V P+++ + K + +A S+ H V G V+ G N
Sbjct: 4236 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSL---HCVCCTEDGEVYTWGDNDEG 4292
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSS---QPLIGVCCGRFHSVVYSS 190
QLG + I R L ++ + + V CG H++ +S+
Sbjct: 4293 QLGDG-------TTNAIQRPRLVAALQGKKINRVACGSAHTLAWST 4331
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 86/228 (37%), Gaps = 57/228 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG + LG G++ D P +++SL+ + + HS ++ G +++ G G
Sbjct: 4072 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKG 4131
Query: 90 QGGRLGLGSESSVVSPKKLNF-------------------------------EKDKDKL- 117
+ GRLG G + PK + + D KL
Sbjct: 4132 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4191
Query: 118 -------------------GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHI 158
GV SV L SG+V+ G +H+LG H+
Sbjct: 4192 RGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLG-HGSDDHV 4250
Query: 159 VSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
P + L+ + +I + G H V + EVYT+G + GQLG
Sbjct: 4251 RRPRQV--QGLQGKK-VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4295
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ V+ + VY WG + LG GS P + L+ + + H V ++
Sbjct: 4220 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE 4279
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPK 106
DG V++ G G+LG G+ +++ P+
Sbjct: 4280 DGEVYTWGDNDEGQLGDGTTNAIQRPR 4306
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 9/182 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLK-RASIKQV---CMDKFHSVFVSDDGRVW 84
+E++ WG LG G + + P+L+ +L + + KQV +S ++ DG ++
Sbjct: 514 SELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELY 573
Query: 85 SCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
+ G G GRLG GS P + K + V+ S ++ + +G V+ G
Sbjct: 574 TWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGS-GDAQTLSVTENGQVWSWGDG 632
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQ-L 203
+ +LG TP L+ + C +F + +VY++G Q L
Sbjct: 633 DYGKLGRGGSDG---CKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRL 689
Query: 204 GH 205
GH
Sbjct: 690 GH 691
>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4588
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY+WG+N+++ L G+ + +P+L A + ++ + VS DG V +CG G
Sbjct: 340 VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQTIEA--GQYCTFSVSTDGSVKACGKGS 397
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLGLG ++ PKKL E ++ V + S H++ + + G VF G + +LG
Sbjct: 398 YGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKLG 457
Query: 151 LSPPPSHIVSPT---PIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGH 205
H S T P S+ ++ G HS V + E+YT+G G+LGH
Sbjct: 458 ------HGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGH 511
Query: 206 S 206
S
Sbjct: 512 S 512
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 9/170 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + + P+ +++L+ + Q+ HS V+ DG++++ G G
Sbjct: 3786 EVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSG 3845
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSG-SVFVCGLNSFHQ 148
+ GRLG S S+ + P+++ + V S +H++ L L G +V+ G + +
Sbjct: 3846 ESGRLGQRSTSNKMQPERV---AALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGK 3902
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSREVYTFG 197
LG + P + + K + VCCG +F V+ + VYTFG
Sbjct: 3903 LGAGSSTAKYY-PQKVEQLCNKGMKK---VCCGAQFSVVLATDGHVYTFG 3948
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 17/187 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG Q+R+ P L+ + + + QV H++ V+ DGR +WS G
Sbjct: 497 ELYTWGEGDFGRLGHSDSQSRNTPTLVKDI--SGVGQVACGSSHTIAVAQDGRTMWSFGG 554
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + V S S S+ L +G VF G S
Sbjct: 555 GDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQS---SLALTSAGQVFAWGCGSC-- 609
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGH- 205
LG + + P + S+ +I + CG H + S EVY +G + GQ G
Sbjct: 610 LGCGSSETTSLRPRFVEDLSITK---IIDISCGDSHCLALSHENEVYAWGNNTMGQCGQG 666
Query: 206 ---SPVT 209
+P+T
Sbjct: 667 HTSTPIT 673
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++VY+WG N Y G+ +P L L + +QV + S + +G V + G
Sbjct: 3681 SDVYLWG-NGRYGQLAGTGTNLTLPTLAPCLSQT--QQVVCGQNCSFLIQSNGAVMAVGE 3737
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
GQ GRLG G+ + P ++ + + + S HS+ L +G VF G F +
Sbjct: 3738 GQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGK 3797
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGHS 206
LG ++ P +L+ + ++ + CG HS VV + +++TFG +G+LG
Sbjct: 3798 LGHG---NNERQRRPKQIEALQ-GEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQR 3853
Query: 207 PVTVSSASVIEPKVQATI 224
S+++ ++P+ A +
Sbjct: 3854 ----STSNKMQPERVAAL 3867
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ +G LG GS + P+ ++ L +K+VC SV ++ DG V++ GQ
Sbjct: 3892 VWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYT--FGQ 3949
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
+GL +S + + + L + ++ +H + L +G ++ G NS QLG
Sbjct: 3950 ERLIGL-PDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLG 4008
Query: 151 L 151
L
Sbjct: 4009 L 4009
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG LG G+ T+ P+++ L + HS V++DG +++ G
Sbjct: 444 EVFSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGE 503
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSG 136
G GRLG S +P + KD GV + H++ + G
Sbjct: 504 GDFGRLGHSDSQSRNTPTLV-----KDISGVGQVACGSSHTIAVAQDG 546
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 42 LGTGSQQTRDVPELLDSLKRASIKQV---CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGS 98
LG G+ VP ++ + + + Q+ C HS+ +++ G V+S G G G+LG G+
Sbjct: 3743 LGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGN 3802
Query: 99 ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHI 158
PK++ + +D + +A HS + G +F G +LG S+
Sbjct: 3803 NERQRRPKQIEALQGEDVVQLACGF---RHSAVVTADGKLFTFGSGESGRLG-QRSTSNK 3858
Query: 159 VSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVTVSSASVIEP 218
+ P R + + V CG H++V S + + G G S+A
Sbjct: 3859 MQPE---RVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQ 3915
Query: 219 KVQ 221
KV+
Sbjct: 3916 KVE 3918
>gi|124804612|ref|XP_001348055.1| UVB-resistance protein UVR8 homologue [Plasmodium falciparum 3D7]
gi|23496310|gb|AAN35968.1| UVB-resistance protein UVR8 homologue [Plasmodium falciparum 3D7]
Length = 425
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 29 NEVYIWGTNANY-----NLGTGSQQTRDVPELLDSLKRAS---IKQVCMDKFHSVFVSDD 80
NE+Y WG N LG G++ ++P+ +++ K I C ++ HS+ ++ +
Sbjct: 148 NELYSWGWGGNLFKGANGLGQGNKNNINIPKRVETFKNEDSEFINISCGEQ-HSLALTKN 206
Query: 81 GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS--GSV 138
G+V+ CG G+ GRLG G+ + +++++ + + + IS HS LS G V
Sbjct: 207 GKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFVSNN---IEIKDISCGHSFSAALSKNGDV 263
Query: 139 FVCGLNSFHQLGLSPP----PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVY 194
+V G N + QLG+ SH V P + +++ + + + CG H + S +
Sbjct: 264 YVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIK-IKYIACGDNHMIACSENNII 322
Query: 195 TFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
F G A + P Q ++I++++
Sbjct: 323 YF------WGSRAWLEPKAITLNPLYQNSLIKKNI 351
>gi|82915023|ref|XP_728941.1| UVB-resistance protein UVR8 [Plasmodium yoelii yoelii 17XNL]
gi|23485631|gb|EAA20506.1| UVB-resistance protein UVR8 [Plasmodium yoelii yoelii]
Length = 426
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 29 NEVYIWGTNANY-----NLGTGSQQTRDVPELLDSLKR--ASIKQVCMDKFHSVFVSDDG 81
N++Y WG N+ LG G++ P+ +++ + +C + HS+ ++ G
Sbjct: 149 NDLYSWGWGGNFFKGANGLGQGNKNNLMKPQKIEAFNNDNSEFINICCGEQHSLALTKSG 208
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVC 141
+V+ CG G+ GRLG G+ + +++++ + + + + + S L +G V+V
Sbjct: 209 KVYGCGKGEFGRLGKGNHGDQLFFEEIDYFTNNNII-IKDIACGNSFSAALSNNGEVYVW 267
Query: 142 GLNSFHQLGLSPP----PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
G N + QLG+ SH V P + +++ + + + CG H + S + F
Sbjct: 268 GRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKIKL-IACGDNHMIACSESNIIYF- 325
Query: 198 IHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
G A + PK Q ++I++++
Sbjct: 326 -----WGSRAWLEPKAITLNPKYQNSLIKKNI 352
>gi|332261039|ref|XP_003279586.1| PREDICTED: protein RCC2 [Nomascus leucogenys]
Length = 448
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 87 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 143
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 144 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 199
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 200 NLYSFGCPEYGQLGHN 215
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 96 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 155
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 156 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 211
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 212 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 271
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 272 DSQKRVFSWGFGGYGRLGHA 291
>gi|432863195|ref|XP_004070017.1| PREDICTED: secretion-regulating guanine nucleotide exchange
factor-like [Oryzias latipes]
Length = 397
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPEL--LDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++ WG N+ LG G + + VP L + L+ I+ V H+ +++ G V+ CG
Sbjct: 10 LHTWGANSYGQLGQGHAEDQLVPRLSGVSELQTKVIRVVRGGGGHTAVITEGGEVFVCGQ 69
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG+G + + + + + V + D S+ L G + CG N+F Q
Sbjct: 70 NHKGQLGIGHCADIATFQICPIFNQR----VTDVACGWDFSLLLTEGGRLLACGSNAFGQ 125
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG 197
LG+ +HI P + ++ +P++ V G HS+ V S VY +G
Sbjct: 126 LGVGETVTHIADPLLV---EVRFHEPIVSVAAGLRHSLAVNDSGCVYQWG 172
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 81/202 (40%), Gaps = 26/202 (12%)
Query: 35 GTNANYNLGTGSQQTRDVPELLDSLK-RASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGR 93
G+NA LG G T LL ++ I V HS+ V+D G V+ G+G
Sbjct: 119 GSNAFGQLGVGETVTHIADPLLVEVRFHEPIVSVAAGLRHSLAVNDSGCVYQWGNGL--- 175
Query: 94 LGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
S V + +K + + H V L G +F+ G N QLG S
Sbjct: 176 -----FSHVDDKEMRTGDKCLSQKKSVLVKAGSAHCVCLTEEGELFLWGSNKHEQLGTS- 229
Query: 154 PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHSPVTVS 211
S + SPTP+ R SL + + + V G H + + S V+T+G GQLG
Sbjct: 230 -ESFLPSPTPL-RRSLLNGEKVSNVWSGWSHIIAQTESGRVFTWGRGDYGQLG------- 280
Query: 212 SASVIEPKVQATIIREDLPGFI 233
P + E L GFI
Sbjct: 281 -----RPNSDSQTPEELLAGFI 297
>gi|195434691|ref|XP_002065336.1| GK14718 [Drosophila willistoni]
gi|194161421|gb|EDW76322.1| GK14718 [Drosophila willistoni]
Length = 486
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ D + G G+LGL + +V +K ++L V A+ + H++FL
Sbjct: 126 HSIIINMDRKALGFGRNPSGQLGLSQDIKLV--EKPTLIPALEQLNVVQAACGRHHTLFL 183
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+G+V+ CG N Q G+ ++I SPTPI P+I V CG SV+ +
Sbjct: 184 TDTGTVYACGENKSGQCGVGNTHANIYSPTPINY----RGPPIIRVGCGAEFSVILDIKG 239
Query: 192 EVYTFGI-HAGQLGHS 206
++TFG+ GQLGH+
Sbjct: 240 NLHTFGLPEYGQLGHN 255
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 30/198 (15%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
+G N + LG SQ + V P L+ +L++ ++ Q + H++F++D G V++CG +
Sbjct: 139 FGRNPSGQLGL-SQDIKLVEKPTLIPALEQLNVVQAACGRHHTLFLTDTGTVYACGENKS 197
Query: 92 GRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+ G+G + +++ SP +N+ + + SV L + G++ GL + QLG
Sbjct: 198 GQCGVGNTHANIYSPTPINYRGPP----IIRVGCGAEFSVILDIKGNLHTFGLPEYGQLG 253
Query: 151 LSPPPSHIV-----------SPTPIPRSSLKSSQ----PLIGV-----CCGRFHSVVYSS 190
+ + V SP + KS + P+ GV CG H+V S
Sbjct: 254 HNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDS 313
Query: 191 RE-VYTFGIHA-GQLGHS 206
++ VY++G G+LGH+
Sbjct: 314 KKRVYSWGFGGFGRLGHA 331
>gi|348506950|ref|XP_003441020.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like
[Oreochromis niloticus]
Length = 651
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
NEV+++G N + LGTG + +P+ LD L+ + + H + +DDG++++ G
Sbjct: 161 NEVFVFGLNCSSCLGTGDGLSTVMPKKLDFLRGKKVASLSYGSGPHVLLATDDGQLFAWG 220
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
H +LG GS + +SP + K V S HS+ L L G VF G N+
Sbjct: 221 HNGYSQLGNGSTNPGLSPVLITANLQNKK--VKEVSCGSHHSMALTLDGEVFAWGYNNCG 278
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + P P + + G+ CG+ S+ + + EVY +G + GQLG
Sbjct: 279 QIGSGSTANQ---PYPRKVTGCLQGKNASGITCGQTSSMALVDNGEVYGWGYNGNGQLG 334
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L+ I+Q+ H + ++D G +++ G
Sbjct: 321 EVYGWGYNGNGQLGIGNNGNQLTPCRVAALQGMCIQQIVSGYGHCLALTDKGLLYAWGAN 380
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
G+LG G++S+ +SP ++ DK+++ A S S SG VF+ G
Sbjct: 381 TYGQLGTGTKSNHLSP--VHIMADKERVVEVAACHSTHTSAAKTQSGQVFMWG 431
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDS-LKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG N LG GS P L+ + L+ +K+V HS+ ++ DG V++ G+
Sbjct: 215 QLFAWGHNGYSQLGNGSTNPGLSPVLITANLQNKKVKEVSCGSHHSMALTLDGEVFAWGY 274
Query: 89 GQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G++G GS ++ P+K+ + K+ G+ + Q S+ L+ +G V+ G N
Sbjct: 275 NNCGQIGSGSTANQPYPRKVTGCLQGKNASGI---TCGQTSSMALVDNGEVYGWGYNGNG 331
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
QLG+ + + TP ++L+ + + G H + + + +Y +G + GQLG
Sbjct: 332 QLGIGNNGNQL---TPCRVAALQ-GMCIQQIVSGYGHCLALTDKGLLYAWGANTYGQLG 386
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P ++ L+ + + + S+ + D+G V+ G+
Sbjct: 268 EVFAWGYNNCGQIGSGSTANQPYPRKVTGCLQGKNASGITCGQTSSMALVDNGEVYGWGY 327
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASI--SQDHSVFLMLSGSVFVCGLNSF 146
G+LG+G+ + ++P ++ + G+ + I H + L G ++ G N++
Sbjct: 328 NGNGQLGIGNNGNQLTPCRVAALQ-----GMCIQQIVSGYGHCLALTDKGLLYAWGANTY 382
Query: 147 HQLGLSPPPSHIVSPTPI 164
QLG +H+ SP I
Sbjct: 383 GQLGTGTKSNHL-SPVHI 399
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + + A+++Q C+ +++++ V+ G LG G S V PKKL+F
Sbjct: 132 LLSAQELATVRQACVFGTTANEAIYITHGNEVFVFGLNCSSCLGTGDGLSTVMPKKLDFL 191
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG---LSPPPSHIVSPTPIPRSS 168
+ K ++ S H + G +F G N + QLG +P S ++ +
Sbjct: 192 RGKKVASLSYG--SGPHVLLATDDGQLFAWGHNGYSQLGNGSTNPGLSPVLITANLQNKK 249
Query: 169 LKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
+K V CG HS+ + EV+ +G + GQ+G
Sbjct: 250 VKE------VSCGSHHSMALTLDGEVFAWGYNNCGQIG 281
>gi|151556979|gb|AAI49505.1| RCC2 protein [Bos taurus]
gi|296489973|tpg|DAA32086.1| TPA: regulator of chromosome condensation 2 [Bos taurus]
Length = 402
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEV---IVSAACGRNHTLAL 215
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 216 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 271
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 272 NLYSFGCPEYGQLGHN 287
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 168 KLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 227
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 228 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 283
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 284 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 343
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 344 DSQKRVFSWGFGGYGRLGHA 363
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 19/197 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTR---DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
E+Y WG+N LG Q + P L +L + + HS +S V+
Sbjct: 159 ELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGF 218
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LGL ES+ P +L K LGV + + SVFL G VF CG ++
Sbjct: 219 GRNNCGQLGLNDESNRAYPTQL---KTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTY 275
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGI-HAGQ 202
QLG + + +PR ++ + V CG H+ +V S VY FG+ +GQ
Sbjct: 276 GQLGHGSNTNEM-----LPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQ 330
Query: 203 LGHSPVTVSSASVIEPK 219
LG+ S+ SV P+
Sbjct: 331 LGNR----STNSVTLPQ 343
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 96/184 (52%), Gaps = 16/184 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+++ WG ++ LG G + + P + A ++Q+ H++F++ +G+V++CG
Sbjct: 2 DLFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACG 61
Query: 88 HGQGGRLG--LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
+ +LG L ++ ++ P+ N+ + VA+A S+ HS+ L G V G N
Sbjct: 62 NNDQAQLGHNLPTKRPLLIPELQNY------VVVAIACGSR-HSMALTEWGQVLSWGDND 114
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQL 203
QLG S S I P I RS + S+ ++ + CG HS+ +S E+Y++G + GQL
Sbjct: 115 CGQLGQSTDQSIIELP-KIIRSLV--SKHVVQIACGNNHSLALTSCGELYSWGSNIYGQL 171
Query: 204 GHSP 207
G P
Sbjct: 172 GVKP 175
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 9/178 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY G N LG R P L+ L+ + + HS+ +++ G+V S G
Sbjct: 56 KVYACGNNDQAQLGHNLPTKR--PLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDN 113
Query: 90 QGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LG ++ S++ PK + K + +A + +HS+ L G ++ G N + Q
Sbjct: 114 DCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGN---NHSLALTSCGELYSWGSNIYGQ 170
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFG-IHAGQLG 204
LG+ PP P+ ++L PL + CG HS + S S V+ FG + GQLG
Sbjct: 171 LGVKPPQELSHCNYPLRLTTLLGI-PLATIACGGNHSFLISKSSAVFGFGRNNCGQLG 227
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
V+ G LG GS +P ++ L ++I QV C ++ V GRV+ G G
Sbjct: 267 VFTCGAGTYGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLG 326
Query: 90 QGGRLGLGSESSVVSPKKL 108
G+LG S +SV P+++
Sbjct: 327 SSGQLGNRSTNSVTLPQEV 345
>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
Length = 725
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 19/223 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL--KRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
V WG LG G + + P+L+++L RA ++ ++DD VWS G
Sbjct: 22 VLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGD 81
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G P K+ + LGV SV L SG+V+ G FH+
Sbjct: 82 GDYGKLGRGGSDGCKLPYKI---ESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHR 138
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLGHS 206
LG H+ P + ++L+ + +I + G H V S S EVYT+G + GQLG
Sbjct: 139 LG-HGSVDHVRRPKKV--AALQGKK-IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDG 194
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETS 249
VT ++ P++ A + + I + G+ H+ TS
Sbjct: 195 TVT----AIQRPRLVAALQGK----HIVKVTCGSAHTLALSTS 229
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 27/204 (13%)
Query: 6 NEEMRP--IDHLIRDRKIDVSS----------NQFNEVYIWGTNANYNLGTGSQQTRDVP 53
+++RP ++ L+ R ID++ + V+ WG LG G +P
Sbjct: 39 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 98
Query: 54 ELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
++SL + +V C +F SV ++ G V++ G G RLG GS V PKK+ +
Sbjct: 99 YKIESLAGLGVVKVECGSQF-SVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQ 157
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
K + +A S+ H V SG V+ G N QLG + T I R L ++
Sbjct: 158 GKKIISIATGSL---HCVACSDSGEVYTWGDNDEGQLGDG-------TVTAIQRPRLVAA 207
Query: 173 ---QPLIGVCCGRFHSVVYSSREV 193
+ ++ V CG H++ S+ ++
Sbjct: 208 LQGKHIVKVTCGSAHTLALSTSQL 231
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 15/182 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTR---DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
E+Y WG+N LG + + P LL +L ++ + HS +S V+
Sbjct: 159 ELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGW 218
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LGL E++ P +L K LGV + + SVFL G VF CG ++
Sbjct: 219 GRNNCGQLGLNDETNRAYPTQL---KTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAY 275
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG-VCCGRFHSV--VYSSREVYTFGI-HAGQ 202
QLG +PR ++ I V CG H++ V + +Y FG+ +GQ
Sbjct: 276 GQLG-----HGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQ 330
Query: 203 LG 204
LG
Sbjct: 331 LG 332
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 13/180 (7%)
Query: 30 EVYIWGTNANYNLG--TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
+VY G+N LG S++ +PEL+D + I Q+ HS+ +++ G+V S G
Sbjct: 56 KVYACGSNDYAQLGHELSSKRPLQIPELVDCV----ITQIACGSRHSMALTEWGQVLSWG 111
Query: 88 HGQGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
+ G+LG S+ VV PK + K + +A + +HS+ L G ++ G N +
Sbjct: 112 DNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGN---NHSLALTCCGELYAWGSNIY 168
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFG-IHAGQLG 204
QLG+ P P+ ++L P+ + CG HS + S S V+ +G + GQLG
Sbjct: 169 GQLGVKTPSELGQCNAPMLLTTLLGI-PVRAIACGGNHSFLISKSSAVFGWGRNNCGQLG 227
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 82 RVWSCGHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVF 139
++ G+ G+LGLG + +++P K+ ++ D V + H++FL SG V+
Sbjct: 2 ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDS---AVNQIACGHRHTLFLTASGKVY 58
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
CG N + QLG + S P+ L + + CG HS+ + +V ++G
Sbjct: 59 ACGSNDYAQLG-----HELSSKRPLQIPELVDC-VITQIACGSRHSMALTEWGQVLSWGD 112
Query: 199 H-AGQLGHS 206
+ GQLGH+
Sbjct: 113 NECGQLGHA 121
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y WG ++ LG G + + P + +++ Q+ H++F++ G+V++CG
Sbjct: 2 ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACG 61
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+LG + S + L + D + +A S+ HS+ L G V G N
Sbjct: 62 SNDYAQLG----HELSSKRPLQIPELVDCVITQIACGSR-HSMALTEWGQVLSWGDNECG 116
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
QLG + + P + R+ + S+ ++ + CG HS+ + E+Y +G + GQLG
Sbjct: 117 QLGHASDQDVVQLPKTV-RALV--SKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLG 172
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
V+ WG N LG + R P L +L+ ++ V C D+F SVF++++G V++CG G
Sbjct: 215 VFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEF-SVFLTNEGGVFTCGAG 273
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLS-GSVFVCGLNSF 146
G+LG G + + P+ + + +G ++ ++ H++ ++ + G ++ GL S
Sbjct: 274 AYGQLGHGFCGNEMLPRMV-----MELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSS 328
Query: 147 HQLGLSPP-----PSHIVSPTPIPRSS--LKSSQPLIGV 178
QLG P ++ P P S L+SS I V
Sbjct: 329 GQLGTRNTKSLNLPQMVIGPWVSPSGSALLQSSDAQIAV 367
>gi|440897095|gb|ELR48863.1| Protein RCC2, partial [Bos grunniens mutus]
Length = 427
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 66 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEV---IVSAACGRNHTLAL 122
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 123 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 178
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 179 NLYSFGCPEYGQLGHN 194
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 75 KLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 134
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 135 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 190
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 191 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 250
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 251 DSQKRVFSWGFGGYGRLGHA 270
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 99/188 (52%), Gaps = 13/188 (6%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRD-VPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N++ +++ WG+NA LG S+ + VP ++ +L + + QV H + ++++G
Sbjct: 174 LAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNG 233
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSV 138
+++S G G+LGLG++ + + PK ++ GV +A I+ HS+ + SG+V
Sbjct: 234 KLYSWGSNSDGQLGLGTDVKNEIKPKLIS-----SLAGVPIAFITCGGYHSMAISKSGAV 288
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI 198
F G N+F QLGL+ + + P +L++++ C F + V+T G
Sbjct: 289 FGWGKNTFGQLGLNDTRNRNL---PRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGA 345
Query: 199 -HAGQLGH 205
GQLGH
Sbjct: 346 GMYGQLGH 353
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG + R++P L +L+ A + + SVF++ DG V++CG G
Sbjct: 288 VFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGM 347
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLS-GSVFVCGLNSFH 147
G+LG G+ S+ + P+++ + +G + IS + H++ L+ S G V+ GL
Sbjct: 348 YGQLGHGNTSNEILPRQV-----MELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAG 402
Query: 148 QLG 150
QLG
Sbjct: 403 QLG 405
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 12/188 (6%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVS 78
++ S+ ++ WG+ + LG G + + VP LD K I+Q+ + ++V ++
Sbjct: 68 VEYSTVTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLIT 127
Query: 79 DDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSV 138
DG+V+SCG+ G+LG K+L D + H++ + G +
Sbjct: 128 RDGQVYSCGNNDYGQLGHEK-----GRKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQL 182
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N+ QLGL+ +++ P +L +S ++ V CG H + ++ ++Y++G
Sbjct: 183 FSWGSNAEGQLGLN--SKNLIECVPHMVRALGTS-VVVQVACGINHVLALTNNGKLYSWG 239
Query: 198 IHA-GQLG 204
++ GQLG
Sbjct: 240 SNSDGQLG 247
>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
Length = 870
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 56 LDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDK 114
+ SL I QV +HS+ +S V+ G + G+LGLG + SP+ + K
Sbjct: 5 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLI-----K 59
Query: 115 DKLGVAMASISQ--DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
LG+ ++ HS L LSG++F G N F QLGL+ V P SL+ S
Sbjct: 60 SLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYV---PNLLKSLR-S 115
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPK 219
Q ++ +CCG H+ + V+TFG GQLGH+ S++ I P+
Sbjct: 116 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN----STSHEINPR 160
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 18/192 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV-PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N LG G + P+L+ SL QV HS ++ G ++ G
Sbjct: 31 EVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGR 90
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGL E+ P N K + +DH+ L G VF G + Q
Sbjct: 91 NKFGQLGLNDENDRYVP---NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 147
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY--SSREVYTFGIHA-GQLG- 204
LG + SH ++P + L S + + CGR H+ + SS +Y+FG+ GQLG
Sbjct: 148 LGHN-STSHEINPRKV--FELMGS-IVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 203
Query: 205 ------HSPVTV 210
SP TV
Sbjct: 204 GSTSNRKSPFTV 215
>gi|410966268|ref|XP_004001548.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Felis catus]
Length = 521
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G +WS G + G+LG G V +PK + + + A+ ++H++ L
Sbjct: 160 HSLLITTEGTLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEV---IVSAACGRNHTLAL 216
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 217 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 272
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 273 NLYSFGCPEYGQLGHN 288
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG G + + P+L++ L I + H++ +++ G V++ G +
Sbjct: 170 LWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENK 229
Query: 91 GGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG+++ V SP ++ + + + + S+ + G+++ G + QL
Sbjct: 230 MGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQL 285
Query: 150 GLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY- 188
G + I I PR K Q L V CG H++V
Sbjct: 286 GHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLD 345
Query: 189 SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 346 SQKRVFSWGFGGYGRLGHA 364
>gi|157074082|ref|NP_001096752.1| probable E3 ubiquitin-protein ligase HERC1 [Bos taurus]
gi|124829173|gb|AAI33287.1| HERC1 protein [Bos taurus]
Length = 532
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + K L FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKNLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 G 150
G
Sbjct: 491 G 491
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQT---RDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
E+Y WG+N LG + + + P L +L + + HS +S V+
Sbjct: 163 ELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGW 222
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G G+LGL E+S P +L K LGV + + SVFL G VF CG ++
Sbjct: 223 GRNNCGQLGLNDETSRSYPTQL---KTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAY 279
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLK-SSQPLIGVCCGRFHS--VVYSSREVYTFGI-HAGQ 202
QLG + + +PR ++ + V CG H+ +V S VY FG+ +GQ
Sbjct: 280 GQLGHGFGANEM-----LPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQ 334
Query: 203 LGHSPVTVSSASVIEPKV 220
LG T S+ S+ P+V
Sbjct: 335 LG----TRSTKSLTLPQV 348
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
E+Y WG ++ LG G + + P + ++IKQV H++F++ GRV++CG
Sbjct: 6 ELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACG 65
Query: 88 HGQGGRLG--LGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
+LG L ++ ++ P+ L++ V + HS+ L G V G N
Sbjct: 66 SNDHSQLGHDLPTKRPLLIPELLDYV-------VVQIACGSRHSMALSEWGQVLSWGDND 118
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS-REVYTFGIHA-GQL 203
QLG IV I R + S+ ++ + CG HS+ +S E+Y++G + GQL
Sbjct: 119 CGQLG-QATDQDIVQLPKIVRQLV--SKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 175
Query: 204 G 204
G
Sbjct: 176 G 176
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRD--VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY G+N + LG R +PELLD + + Q+ HS+ +S+ G+V S G
Sbjct: 61 VYACGSNDHSQLGHDLPTKRPLLIPELLDYV----VVQIACGSRHSMALSEWGQVLSWGD 116
Query: 89 GQGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LG ++ +V PK + K + +A + +HS+ L G ++ G N +
Sbjct: 117 NDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGN---NHSLALTSCGELYSWGSNIYG 173
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFG-IHAGQLG 204
QLG++ P S P+ ++L P+ + CG HS + S S V+ +G + GQLG
Sbjct: 174 QLGVNTPKEVTHSNQPVRLTTLLGI-PVAAIACGGNHSFIISKSSAVFGWGRNNCGQLG 231
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 17/166 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
V+ WG N LG + +R P L +L+ ++ V C D+F SVF++++G V++CG G
Sbjct: 219 VFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEF-SVFLTNEGGVFTCGAG 277
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLS-GSVFVCGLNSF 146
G+LG G ++ + P+ + + +G + ++ H++ L+ S G V+ GL S
Sbjct: 278 AYGQLGHGFGANEMLPRMV-----MELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSS 332
Query: 147 HQLGLSPP-----PSHIVSPTPIPRSS--LKSSQPLIGVCCGRFHS 185
QLG P ++ P P S L+SS + V + S
Sbjct: 333 GQLGTRSTKSLTLPQVVIGPWVSPSGSALLQSSDAKVSVVIHQIFS 378
>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
Length = 371
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 12/191 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++++G+N LG GS+ T + P + +LK + + H++ + +GRV+S G
Sbjct: 47 LFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVLLAACGRNHTLICTGEGRVFSSGGNS 106
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLG-VAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG + ++++ D LG + M + + S L SG +F+ G N+ Q+
Sbjct: 107 EGQLGLGDCEERTTFRRIH---ALDSLGPIKMLAAGSNTSAALTESGKLFMWGDNTEGQI 163
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIH-AGQLGHSP 207
GL S P P+ + P+ V CG +HS +V ++ +YTFG +G+LG +
Sbjct: 164 GLGKE-----SHAPWPQ-EVSVGAPVSWVSCGYYHSALVTAAGALYTFGERDSGKLGLTT 217
Query: 208 VTVSSASVIEP 218
+ V +P
Sbjct: 218 EQLPRHRVPQP 228
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 59 LKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKD 115
LK Q+ H+ ++ +GR++ G G+LGLGS+ +V P K L EK
Sbjct: 23 LKNDVPSQISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEK--- 79
Query: 116 KLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
V +A+ ++H++ G VF G NS QLGL
Sbjct: 80 ---VLLAACGRNHTLICTGEGRVFSSGGNSEGQLGL 112
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 52 VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSES 100
+P L++ K+ ++QV + HS ++D G +++ G G+ G+LGLG E+
Sbjct: 302 LPRLVEHFKKGRVRQVACGENHSAVITDGGLLYTFGDGRHGKLGLGDEN 350
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 81/216 (37%), Gaps = 31/216 (14%)
Query: 7 EEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQ 66
+ + PI L + + ++++WG N +G G + P+ + A +
Sbjct: 128 DSLGPIKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLGKESHAPWPQEVSV--GAPVSW 185
Query: 67 VCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSES-----------SVVSPKK-------- 107
V +HS V+ G +++ G G+LGL +E S+ P +
Sbjct: 186 VSCGYYHSALVTAAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRSIGEPVRQVACGGGH 245
Query: 108 ---LNFEKDKDKLGVAMASISQDHSVFLMLS-GSVFVCGLNSFHQLGLSPPPSHIVSPTP 163
L + + D + FL LS +F GL F QLG V +
Sbjct: 246 TVALTGGGSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGT----FVFESR 301
Query: 164 IPRSSLKSSQPLI-GVCCGRFHS-VVYSSREVYTFG 197
+PR + + V CG HS V+ +YTFG
Sbjct: 302 LPRLVEHFKKGRVRQVACGENHSAVITDGGLLYTFG 337
>gi|156399604|ref|XP_001638591.1| predicted protein [Nematostella vectensis]
gi|156225713|gb|EDO46528.1| predicted protein [Nematostella vectensis]
Length = 140
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 32 YIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
Y WG N+ LG G RD P L+D+LK +I + C SVFV+D+G V +CG
Sbjct: 18 YTWGDNSRGQLGQGDLVNRDKPTLVDTLKGKAITRACCGDKFSVFVTDNGIVMTCGSSDT 77
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G LG G SS PK + D V S H + G VF G + +LGL
Sbjct: 78 GCLGHGDWSSTPRPKLIEGLLSVD---VTAVSCGPHHVAVVCSEGLVFTWGKGADGRLGL 134
>gi|428166718|gb|EKX35689.1| hypothetical protein GUITHDRAFT_57398, partial [Guillardia theta
CCMP2712]
Length = 257
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLD----SLKRASIKQVCMDKFHSVFVSDDGRVWS 85
E ++WG N + LG ++ R + + L ++K V HSVF+ D +V+S
Sbjct: 120 EAHMWGLNKHGQLGLRAEGGRGEISMAEINQAMLSTLNVKLVACGGNHSVFLCSDLKVYS 179
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
CG G G+LG GS P+++ ++++ ++ S +H++F SG +FVCG N
Sbjct: 180 CGMGSKGQLGHGSRRDEHRPRRVERLEEQE---ISEVSCGYEHTLFRDSSGVLFVCGSNE 236
Query: 146 FHQLGLSPPPSHIVSPTPI 164
+ QL L ++P I
Sbjct: 237 YGQLFLGSDHQEALTPVEI 255
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E+ WG + G + ++ VP L+ SL+ + QV + H++ ++ +V SCG
Sbjct: 16 ELVTWGNSDRGQCGHDTFRSSQVPRLIRSLREHYVMQVACGESHTLILTSTSQVLSCGLA 75
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G LG G +P+ + L V + ++HS ++ +G + GLN QL
Sbjct: 76 AYGALGHGDGEDCCTPRVIGALW---SLPVVQIAAGENHSAAVVSTGEAHMWGLNKHGQL 132
Query: 150 GLSPPPSH-IVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGH 205
GL +S I ++ L + + V CG HSV + S +VY+ G+ + GQLGH
Sbjct: 133 GLRAEGGRGEISMAEINQAMLSTLNVKL-VACGGNHSVFLCSDLKVYSCGMGSKGQLGH 190
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 3/124 (2%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++V G A LG G + P ++ +L + Q+ + HS V G G
Sbjct: 67 SQVLSCGLAAYGALGHGDGEDCCTPRVIGALWSLPVVQIAAGENHSAAVVSTGEAHMWGL 126
Query: 89 GQGGRLGLGSES--SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
+ G+LGL +E +S ++N + L V + + +HSVFL V+ CG+ S
Sbjct: 127 NKHGQLGLRAEGGRGEISMAEIN-QAMLSTLNVKLVACGGNHSVFLCSDLKVYSCGMGSK 185
Query: 147 HQLG 150
QLG
Sbjct: 186 GQLG 189
>gi|291414169|ref|XP_002723335.1| PREDICTED: regulator of chromosome condensation 2 [Oryctolagus
cuniculus]
Length = 560
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 199 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 255
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 256 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMITDCKG 311
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 312 NLYSFGCPEYGQLGHN 327
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 208 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 267
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ G+++ G + Q
Sbjct: 268 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMITDCKGNLYSFGCPEYGQ 323
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 324 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 383
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 384 DSQKRVFSWGFGGYGRLGHA 403
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 22/196 (11%)
Query: 18 DR-KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVF 76
DR + + SN + Y WG LG GS P L+ + S QV HS+
Sbjct: 220 DRHSLAIGSN--GKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLA 277
Query: 77 VSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSG 136
V DG+ ++ G+ G+LG + +S ++P + L V S DHS+ + G
Sbjct: 278 VGSDGKAYAWGNNDSGQLGNATTTSSLAPVLV---SPMGGLAVTQVSAGADHSLAIGADG 334
Query: 137 SVFVCGLNSFHQLG-----LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR 191
+ + GLN QLG S P + +P + + ++ G HS+ +S
Sbjct: 335 NAYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIE---------AGGLHSLTAASD 385
Query: 192 E-VYTFGIHA-GQLGH 205
E YT+G ++ GQLG+
Sbjct: 386 ENTYTWGANSFGQLGN 401
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSL---KRASIKQVCMDKFHSVF 76
+ V SN ++Y WG N + LG G+ VP + + + QV HS+
Sbjct: 168 SLAVGSN--GDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLA 225
Query: 77 VSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLML 134
+ +G+ ++ G +GG+LG+GS S +P ++ GV+ +S HS+ +
Sbjct: 226 IGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPA-----GVSFTQVSAGDLHSLAVGS 280
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREV 193
G + G N QLG + S + P L +Q V G HS+ + +
Sbjct: 281 DGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQ----VSAGADHSLAIGADGNA 336
Query: 194 YTFGIHA-GQLGHSPVTVSSASVI 216
Y +G++ GQLG++ +T S+ V+
Sbjct: 337 YAWGLNVNGQLGNNTITTSTVPVM 360
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 3/177 (1%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+Y WG N++ LG S VP L+ + + QV HS+ V DG ++ G
Sbjct: 69 NIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAWGRN 128
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + P ++ + ++ HS+ + +G ++ G N QL
Sbjct: 129 TDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQL 188
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
G + V P + ++ + V G HS+ + S+ + Y +G GQLG
Sbjct: 189 GDGTTLASSV-PLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQLG 244
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Query: 65 KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASI 124
QV HS+ + DG +++ G+ G+LG +S+++ D + S
Sbjct: 52 TQVSAGINHSLAMGSDGNIYAWGYNSSGQLG---NNSILNSSVPVLVSTPDGVTFTQVSA 108
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFH 184
DHS+ + G+ + G N+ +LG V P + ++ S + V G FH
Sbjct: 109 GADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSV-PLLVSAGAVPSGVTISQVMAGGFH 167
Query: 185 SV-VYSSREVYTFGIH-AGQLGHSPVTVSS 212
S+ V S+ ++Y++G + +GQLG SS
Sbjct: 168 SLAVGSNGDIYSWGYNRSGQLGDGTTLASS 197
>gi|389584248|dbj|GAB66981.1| guanidine nucleotide exchange factor, partial [Plasmodium cynomolgi
strain B]
Length = 2147
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E+Y WG AN LG G+ Q+ + P+L+ + KR I VC K HS + + V++ G
Sbjct: 358 ELYSWGYGANGRLGLGNIQSYNKPQLVKTFQKRKKIIYVCSGKSHSGCIDAENNVYTWGS 417
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
G+ +LG G ++ V+SPK+L++ K + M S +S+ L + G VF+ G+
Sbjct: 418 GRYFKLGHGDDNDVLSPKRLDYLCHSRK--IFMLSFGTFNSLALSVKGDVFLWGV 470
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVC-MDKFHSVFVSDDGRVWSCGH 88
E+Y WG + +G G+ T+ L + + C + H++ ++D ++ CG
Sbjct: 822 ELYTWGNAESGKVGLGADYTQGAILLPRRVNLTNKVHRCSLGNSHTLILTDSNELYVCGS 881
Query: 89 GQGGRLGLGSES---SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G+LGL S V SP+K+N + + + +S+ L + G ++ G
Sbjct: 882 ANNGKLGLTDRSIGYMVSSPRKVNIDP---SIYIKQVVAGATYSMILSVDGFIYTWG--E 936
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI 198
F + + + S P+ S + + + +IG G+ V++ + + FG+
Sbjct: 937 FIK-------NELASEVPVLYSQISNVKHIIG---GKDRHVLFLTCDNKLFGL 979
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVF 131
HS+ + G ++S G+G GRLGLG+ S P+ + F+K K + V + HS
Sbjct: 349 HSMACTLRGELYSWGYGANGRLGLGNIQSYNKPQLVKTFQKRKKIIYVCSG---KSHSGC 405
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR 191
+ +V+ G + +LG + ++SP + L S+ + + G F+S+ S +
Sbjct: 406 IDAENNVYTWGSGRYFKLG-HGDDNDVLSPKRL--DYLCHSRKIFMLSFGTFNSLALSVK 462
Query: 192 -EVYTFGI 198
+V+ +G+
Sbjct: 463 GDVFLWGV 470
>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
Length = 531
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L++L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGMNYSNCLGTGDSQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + ++P ++ K + VA S HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS---HHSMALAADGEVFAWGYNNC 157
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 158 GQVGSGSTANQ---PTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACG---QTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G+++++++P + EK++
Sbjct: 261 TYGQLGTGNKNNLLNPVHIMVEKER 285
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P ++ + L + + + S+ V D+G V+ G+
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + +++++P I
Sbjct: 265 LG-TGNKNNLLNPVHI 279
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+D+ V+ G LG G S + PKKL
Sbjct: 12 LLSPQEIASIRKACVFGNSANEALYVTDNDEVFVFGMNYSNCLGTGDSQSTLVPKKL--- 68
Query: 112 KDKDKLGVAMASISQDHSVFLMLS---GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
+ G + S+S ++LS G V+ G N + QLG I PI +
Sbjct: 69 --EALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGI---APIQVCT 123
Query: 169 LKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ ++ V CG HS+ ++ EV+ +G + GQ+G
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG 161
>gi|332030031|gb|EGI69856.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Acromyrmex echinatior]
Length = 2956
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N +Y WG + LG G PEL+ SL + I ++HSV ++ DGR+++ G
Sbjct: 1963 NGIYAWGASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVAGQYHSVALTADGRIFTWGW 2022
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSVFVCGLNSF 146
G G+LG G+ P + K LG+ + IS H++ L + G ++ G N
Sbjct: 2023 GVHGQLGHGNTDEKAIPSLV-----KALLGIVVCCISAGYAHTLALSIDGVLYAFGCNIL 2077
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG 197
QLG +I S PI + SL LI G FH++ V ++ ++Y +G
Sbjct: 2078 GQLGTG---DNIKSSVPI-KVSLPDRITLIST--GYFHNLAVSNTNKLYIWG 2123
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 58/193 (30%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIK--QVCMDKFHSVFVSDDGRVWSCG 87
+Y WG++ LGTGS R P + K I+ V H++ V+++G +++ G
Sbjct: 1911 IYTWGSSVQGCLGTGSSVLRYGTPHAICFFKSMKIEVFSVSCGHCHTLAVTNNG-IYAWG 1969
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
Q G+LGLG SP+ + + + A Q HSV L G +F G
Sbjct: 1970 ASQFGQLGLGKVLQCSSPELVTSLAQEI---IVDAVAGQYHSVALTADGRIFTWGWGVHG 2026
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCC---GRFHSVVYSSREV-YTFGIHA-GQ 202
QLG IP SL + I VCC G H++ S V Y FG + GQ
Sbjct: 2027 QLGHGN-----TDEKAIP--SLVKALLGIVVCCISAGYAHTLALSIDGVLYAFGCNILGQ 2079
Query: 203 LGHSPVTVSSASV 215
LG SS +
Sbjct: 2080 LGTGDNIKSSVPI 2092
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 110/243 (45%), Gaps = 18/243 (7%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVP---ELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
Q + VY+WG N LG +P E+L LK I F VS +G++
Sbjct: 2949 QQSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVLSKLKPIHIAGGSKTLF---IVSQEGKL 3005
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
++CG G GRLGLG + ++ PK + F VA+ S + H++ L G VF G
Sbjct: 3006 YACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGK-HALALTQDGKVFSWGE 3064
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAG 201
+LG + P SLKS + + + CG HS +S E+YT+G+ G
Sbjct: 3065 GEDGKLGHG---NCTTLDKPRLIESLKSKR-IRDIACGSGHSAAIASNGELYTWGLGEYG 3120
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGK 261
+LGH +A+ ++PK+ + + + S S TA+ + +G G GK
Sbjct: 3121 RLGHG----DTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCV-YTWGDGDFGK 3175
Query: 262 KGK 264
G+
Sbjct: 3176 LGR 3178
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 5/176 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG LG G + D P+L+++L +I + +S +S G +++ G G
Sbjct: 530 VYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSASGELYTWGRGN 589
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG GS V P + K + VA S ++ + SG VF G + +LG
Sbjct: 590 YGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGS-GDSQTLCVTASGIVFSWGDGDYGKLG 648
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI-HAGQLGH 205
S TP L + C G+F + + + EVYT+G A +LGH
Sbjct: 649 RGGSDG---SKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGH 701
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 4/175 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
++ Q +V+ WG + LG G+ T D P L++SLK I+ + HS ++ +G
Sbjct: 3051 LALTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGE 3110
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
+++ G G+ GRLG G ++ + PK + + + VA S ++ L G V+ G
Sbjct: 3111 LYTWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGS-RDAQTMSLTADGCVYTWG 3169
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
F +LG TP+ L + C +F + EV+T+G
Sbjct: 3170 DGDFGKLGRGGSDG---CYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWG 3221
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 13/195 (6%)
Query: 8 EMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV 67
+++PI H+ K +Q ++Y G N LG G P+L+ L + IK+V
Sbjct: 2983 KLKPI-HIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKV 3041
Query: 68 CMDK--FHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS 125
+ H++ ++ DG+V+S G G+ G+LG G+ +++ P+ + K K +A S
Sbjct: 3042 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGS-- 3099
Query: 126 QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS 185
HS + +G ++ GL + +LG + + P +L S Q ++ V CG +
Sbjct: 3100 -GHSAAIASNGELYTWGLGEYGRLGHGDTATQM---KPKLVQAL-SGQRVVQVACGSRDA 3154
Query: 186 VVYSSRE---VYTFG 197
S VYT+G
Sbjct: 3155 QTMSLTADGCVYTWG 3169
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 57/227 (25%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG + LG G++ + D P+L++ L I + HS ++ G +++ G G+
Sbjct: 4040 VYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGR 4099
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS-------ISQDHSVF------------ 131
GRLG G + PK + +D + VA S ++ D +V+
Sbjct: 4100 YGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4159
Query: 132 --------------------------------LMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
L SG+V+ G +H+LG H+
Sbjct: 4160 GGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLG-HGTDDHVR 4218
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
P + ++L+ + +I + G H V S + EV+T+G + GQLG
Sbjct: 4219 RPRKV--AALQGKK-IISIATGSLHCVACSDKGEVFTWGDNDEGQLG 4262
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDK--FHSVFVSDDGRVWSCG 87
+VY G A LG G + VP LL+S++ IK+V ++ H + +S +G V+S G
Sbjct: 3985 KVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWG 4044
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNS 145
G G+LG G+ S PK + +D LG+ + I+ HS + +G ++ G
Sbjct: 4045 EGDDGKLGHGNRLSYDRPKLV-----EDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGR 4099
Query: 146 FHQLG 150
+ +LG
Sbjct: 4100 YGRLG 4104
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCG 87
+ V+ WG LG G VP +DSL + +V C +F SV ++ G V++ G
Sbjct: 4144 DNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQF-SVALTRSGAVYTWG 4202
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G RLG G++ V P+K+ + K + +A S+ H V G VF G N
Sbjct: 4203 KGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSL---HCVACSDKGEVFTWGDNDEG 4259
Query: 148 QLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSVVYSS 190
QLG S PR +L+ + + V CG H++ +S+
Sbjct: 4260 QLG-----DGTTSALQRPRLVHALQGKK-ITRVACGSAHTLAWST 4298
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 23/229 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
VY WG LG G P L+D L + QV C +F S+ ++ G VW+ G G
Sbjct: 3165 VYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQF-SLALTKYGEVWTWGKG 3223
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
RLG G++ V P + + K + VA+ ++ H + + +G V+ G N Q
Sbjct: 3224 DYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGAL---HCLAVTDTGQVYAWGDNDHGQQ 3280
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY--------SSREVYTFGIHAG 201
G + IV+ P L ++ + V CG HS+ + ++E TF
Sbjct: 3281 GNG---TTIVNRKPSLVHELDDTR-MNRVSCGSSHSIAWILVDQPTNGNQEPVTFQTARD 3336
Query: 202 QLGHSPVTVSSAS----VIEPKVQATIIREDLPGFI--FESNRGTKHSF 244
LG + + +A+ V+ A R L I ESN + +
Sbjct: 3337 PLGQMCLGLGNAAEQNGVVATTSNAIATRPSLASIILSLESNVAKQQAL 3385
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 83/192 (43%), Gaps = 11/192 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG N LG +P +SL Q+ + V+ DG+V+S G+G
Sbjct: 3934 IYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGYGA 3993
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLG+G SV+ P L + VA+ S + H + L G V+ G +LG
Sbjct: 3994 AGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGK-HCLALSSEGHVYSWGEGDDGKLG 4052
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI-HAGQLGHSPV 208
S+ P L + ++ + CG HS + S+ +YT+G G+LGH
Sbjct: 4053 HGNRLSY---DRPKLVEDLLGIE-IVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHG-- 4106
Query: 209 TVSSASVIEPKV 220
S + PKV
Sbjct: 4107 --DSDDQLRPKV 4116
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ ++ ++ EV+ WG + LG G+ P L++ L+ I V + H + V+D
Sbjct: 3206 QFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTD 3265
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML 134
G+V++ G G+ G G + + +K + + D + S HS+ +L
Sbjct: 3266 TGQVYAWGDNDHGQQGNG---TTIVNRKPSLVHELDDTRMNRVSCGSSHSIAWIL 3317
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
V+ WG LG G P+++D L ++ +V C +F S ++ G V++ G G
Sbjct: 636 VFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQF-SAALTARGEVYTWGKG 694
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
RLG G+E V PK + +DK + S+ H + L V+ G N + Q
Sbjct: 695 DAYRLGHGNEEHVRYPKLIESLRDKK---IKDLSVGGTHILALTEDQFVYGWGRNDYGQ- 750
Query: 150 GLSPPPSHIVS-PTPIPRSSLKSSQPLIGVCCGRFHSVVY 188
+ P +VS P+ P SS+ +IG+ G S +
Sbjct: 751 -IDPTLGPVVSEPSLCPT---LSSKNVIGLASGPTQSFAW 786
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ V+ + VY WG + LG G+ P + +L+ I + H V SD
Sbjct: 4187 QFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSD 4246
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
G V++ G G+LG G+ S++ P+ ++ + K VA S
Sbjct: 4247 KGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGS 4290
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG Y LG G+++ P+L++SL+ IK + + H + +++D V+ G
Sbjct: 687 EVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRN 746
Query: 90 QGGRL 94
G++
Sbjct: 747 DYGQI 751
>gi|162450118|ref|YP_001612485.1| BNR repeat-containing protein [Sorangium cellulosum So ce56]
gi|161160700|emb|CAN92005.1| BNR repeat domain protein [Sorangium cellulosum So ce56]
Length = 1462
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
Q V+ WG N N LG G+ + VP + +L + + HS+ V DG VW+
Sbjct: 927 QDGTVWAWGNNGNGQLGVGTAKASQVPVKIPTLN--GVTAIAAGANHSLAVRGDGTVWAW 984
Query: 87 GHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG-VAMASISQDHSVFLMLSGSVFVCGLNS 145
G+ G+LG G+ S P +++ +LG V + HS+ L G+V+ G NS
Sbjct: 985 GNNAHGQLGDGTTSQRSEPVQVS------ELGQVLRVAGGTGHSLALKADGTVWAFGSNS 1038
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHA-GQLG 204
QLG+S S P+ S S+ C G +V+ + ++ T+G ++ GQLG
Sbjct: 1039 HGQLGVSTSTSQRSIAAPVSGISHASAV----ACGGNSSAVLLPTGDIRTWGENSKGQLG 1094
Score = 44.3 bits (103), Expect = 0.056, Method: Composition-based stats.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P L+ L R I + + HS+ + DG VW+ G+ G+LG+G+ + P K+
Sbjct: 903 PALVPMLDR--ITAIVTGEEHSLALRQDGTVWAWGNNGNGQLGVGTAKASQVPVKIPTLN 960
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
GV + +HS+ + G+V+ G N+ QLG P+ S L
Sbjct: 961 -----GVTAIAAGANHSLAVRGDGTVWAWGNNAHGQLGDGTTSQR---SEPVQVSELGQ- 1011
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEP 218
++ V G HS+ + V+ FG ++ GQLG S T S S+ P
Sbjct: 1012 --VLRVAGGTGHSLALKADGTVWAFGSNSHGQLGVSTST-SQRSIAAP 1056
Score = 38.9 bits (89), Expect = 2.6, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG P +D ++ V + +H + + DG VW GH
Sbjct: 1332 KIWTWGANYYGQLGIAGASYYTEP--VDIHDQSGFIDVSVGDWHVLGIKADGTVWGWGHN 1389
Query: 90 QGGRLGLGSESSVVSP 105
GG+LG G+ + +P
Sbjct: 1390 GGGQLGDGTTQTRSTP 1405
>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
[Papio anubis]
Length = 355
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L+ L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
H +LG G+ + ++P ++ + V + HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGIAPIQVCTNLLIKQ--VVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 159 QVGSGSTANQ---PTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG---QTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++++++SP + EK++
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P ++ + L + + + S+ V D+G V+ G+
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SP I
Sbjct: 265 LG-TGNKNNLLSPAHI 279
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+DD V+ G LG G S + PKKL E
Sbjct: 12 LLSPQEIASIRKACVFGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKL--E 69
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
K +++ S H + G V+ G N + QLG I PI +
Sbjct: 70 GLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGI---APIQVCTNLL 126
Query: 172 SQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ ++ V CG HS+ ++ EV+ +G + GQ+G
Sbjct: 127 IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG 161
>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 821
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N++ LG G RDVPE + S V H++ V DG +W+ G
Sbjct: 644 LWAWGRNSDGQLGLGDTDNRDVPEQVGS--DTDWAAVSTGSGHTLAVKTDGTLWAWGRNS 701
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG +P+++ + D A + H++ + G+++ GLN + QLG
Sbjct: 702 DGQLGLGDTDERHAPEQVGGDSD-----WAAVTAGWQHTLAIKNDGTLWGWGLNLYGQLG 756
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV 187
L +P + S ++ V GR+H++
Sbjct: 757 LGDTDGRH-APMQVGSDSDWAT-----VAAGRYHTLA 787
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N++ LG G RD P + S V H++ V +DG +W+ G
Sbjct: 594 LWAWGRNSHGQLGLGDTNNRDAPVQVASDN--DWAAVSAGSRHTLAVKNDGTLWAWGRNS 651
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG + P+++ + D A S H++ + G+++ G NS QLG
Sbjct: 652 DGQLGLGDTDNRDVPEQVGSDTD-----WAAVSTGSGHTLAVKTDGTLWAWGRNSDGQLG 706
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLG---- 204
L +P + S V G H++ + + ++ +G++ GQLG
Sbjct: 707 LGDTDERH-APEQVGGDS-----DWAAVTAGWQHTLAIKNDGTLWGWGLNLYGQLGLGDT 760
Query: 205 ---HSPVTVSS----ASVIEPKVQATIIREDLPGFIFESNR 238
H+P+ V S A+V + +++D + NR
Sbjct: 761 DGRHAPMQVGSDSDWATVAAGRYHTLAVKDDGTLRAWGRNR 801
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 15/176 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG G + RD P + S V +++ V DDG +W+ G
Sbjct: 144 LWAWGQNNVGQLGLGDTEKRDTPAQVGS--DTDWAAVSAGGAYTLAVKDDGTLWAWGENY 201
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG +P+++ + D VA+ S + H++ L G+++ G N F QLG
Sbjct: 202 FGQLGLGDTDDRHAPEQVGSDSDW----VAV-SAGRHHTLALKADGTLWAWGRNYFGQLG 256
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
L ++ +P + S GV G HS+ V ++++G + GQLG
Sbjct: 257 LG-GTTNRNAPEQV-----GSHSDWAGVIGGDRHSLAVREDGTLWSWGQNNVGQLG 306
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 26/211 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N N LG G R PE + S + V +++ V DDG +W+ G
Sbjct: 544 LWGWGQNYNGQLGLGDTDDRKTPERVGS--DSDWATVSAGTGYTLAVKDDGTLWAWGRNS 601
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG ++ +P ++ + D A S H++ + G+++ G NS QLG
Sbjct: 602 HGQLGLGDTNNRDAPVQVASDND-----WAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLG 656
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG---- 204
L + V + S V G H++ V + ++ +G ++ GQLG
Sbjct: 657 LGDTDNRDVP------EQVGSDTDWAAVSTGSGHTLAVKTDGTLWAWGRNSDGQLGLGDT 710
Query: 205 ---HSPVTV---SSASVIEPKVQATI-IRED 228
H+P V S + + Q T+ I+ D
Sbjct: 711 DERHAPEQVGGDSDWAAVTAGWQHTLAIKND 741
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 22/189 (11%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG G R+ PE + S + V HS+ V +DG +WS G
Sbjct: 244 LWAWGRNYFGQLGLGGTTNRNAPEQVGS--HSDWAGVIGGDRHSLAVREDGTLWSWGQNN 301
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG P+++ + D A S H++ + G+++ G N F QLG
Sbjct: 302 VGQLGLGDTVERRRPEQVGNDSD-----WATVSAGLLHTLAVKNDGTLWAWGGNGFGQLG 356
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSREVYTFGIHA-GQLG---- 204
L + P+ + S + G R+ V + ++++G + G+LG
Sbjct: 357 LGDTDNR---DAPV---QVGSDNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELGLGDT 410
Query: 205 ---HSPVTV 210
H+P V
Sbjct: 411 DDRHAPEQV 419
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 26/195 (13%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG G RD P + S + + +S+ V +DG +WS G
Sbjct: 344 LWAWGGNGFGQLGLGDTDNRDAPVQVGSDN--DWAALNAGQRYSLAVKNDGSLWSWGWND 401
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD--HSVFLMLSGSVFVCGLNSFHQ 148
G LGLG +P+++ G+ A+++ H++ + G++ G N F +
Sbjct: 402 FGELGLGDTDDRHAPEQVGG-------GMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGE 454
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFG-IHAGQLG-- 204
LGL +I SP + G++ + V + ++ +G H+GQLG
Sbjct: 455 LGLGVMV-YITSPLQTV-----TEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLG 508
Query: 205 -----HSPVTVSSAS 214
H+PV V S
Sbjct: 509 DTDDRHAPVQVGGDS 523
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 15/176 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N + LG G R P + + + + + H++ V DG +W G
Sbjct: 494 LWGWGRNHSGQLGLGDTDDRHAPVQVGG--DSDWTSLSVGREHTLAVKADGTLWGWGQNY 551
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG +P+++ + D A S +++ + G+++ G NS QLG
Sbjct: 552 NGQLGLGDTDDRKTPERVGSDSD-----WATVSAGTGYTLAVKDDGTLWAWGRNSHGQLG 606
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
L + P+ + S V G H++ V + ++ +G ++ GQLG
Sbjct: 607 LGDTNNR---DAPV---QVASDNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLG 656
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG G R PE + S + V + H++ + DG +W+ G
Sbjct: 194 LWAWGENYFGQLGLGDTDDRHAPEQVGS--DSDWVAVSAGRHHTLALKADGTLWAWGRNY 251
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD-HSVFLMLSGSVFVCGLNSFHQL 149
G+LGLG ++ +P+++ D I D HS+ + G+++ G N+ QL
Sbjct: 252 FGQLGLGGTTNRNAPEQVGSHSDW------AGVIGGDRHSLAVREDGTLWSWGQNNVGQL 305
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG--- 204
GL P + S ++ V G H++ V + ++ +G + GQLG
Sbjct: 306 GLGDTVER-RRPEQVGNDSDWAT-----VSAGLLHTLAVKNDGTLWAWGGNGFGQLGLGD 359
Query: 205 ----HSPVTVSS 212
+PV V S
Sbjct: 360 TDNRDAPVQVGS 371
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 7/120 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N++ LG G R PE + + V H++ + +DG +W G
Sbjct: 694 LWAWGRNSDGQLGLGDTDERHAPEQVGG--DSDWAAVTAGWQHTLAIKNDGTLWGWGLNL 751
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG +P ++ + D A + + H++ + G++ G N F QLG
Sbjct: 752 YGQLGLGDTDGRHAPMQVGSDSD-----WATVAAGRYHTLAVKDDGTLRAWGRNRFGQLG 806
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 24/169 (14%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H++ + DG +W+ G G+LGLG +P ++ + D A S +++ +
Sbjct: 134 HTLAMKADGTLWAWGQNNVGQLGLGDTEKRDTPAQVGSDTD-----WAAVSAGGAYTLAV 188
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
G+++ G N F QLGL +P + S + V GR H++ +
Sbjct: 189 KDDGTLWAWGENYFGQLGLGDTDDRH-APEQV-----GSDSDWVAVSAGRHHTLALKADG 242
Query: 192 EVYTFG-IHAGQLG-------HSPVTVSS----ASVIEPKVQATIIRED 228
++ +G + GQLG ++P V S A VI + +RED
Sbjct: 243 TLWAWGRNYFGQLGLGGTTNRNAPEQVGSHSDWAGVIGGDRHSLAVRED 291
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 20/187 (10%)
Query: 34 WGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGR 93
WG N LG G P L ++ A ++ + V DG +W G G+
Sbjct: 447 WGRNDFGELGLGVMVYITSP--LQTVTEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQ 504
Query: 94 LGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
LGLG +P ++ + D L S+ ++H++ + G+++ G N QLGL
Sbjct: 505 LGLGDTDDRHAPVQVGGDSDWTSL-----SVGREHTLAVKADGTLWGWGQNYNGQLGLGD 559
Query: 154 PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHA-GQLG-------H 205
TP R S + G + V ++ +G ++ GQLG
Sbjct: 560 TDDR---KTP-ERVGSDSDWATVSAGTG-YTLAVKDDGTLWAWGRNSHGQLGLGDTNNRD 614
Query: 206 SPVTVSS 212
+PV V+S
Sbjct: 615 APVQVAS 621
>gi|8655683|emb|CAB94882.1| hypothetical protein [Homo sapiens]
Length = 333
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 17 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 73
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 74 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 129
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 130 NLYSFGCPEYGQLGHN 145
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 26 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 85
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 86 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 141
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 142 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 201
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 202 DSQKRVFSWGFGGYGRLGHA 221
>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 2478
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY +G N LG+G R +P L++SL+ I + ++H+V + + V SCG
Sbjct: 390 EVYTFGRNDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKN 449
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LGL ES+ K + + D V H++ L VF G N + QL
Sbjct: 450 DYGQLGL--ESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQL 507
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG--- 204
GL + PT I + K + + G +H+V+ + ++ FG H GQLG
Sbjct: 508 GLGHTTQRVFGPTIIEGAQEKH---VYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGD 564
Query: 205 ----HSPVTVSS 212
HSP VS+
Sbjct: 565 TNERHSPFPVST 576
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 34 WGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGR 93
+G N LG G+ + VP+ + L + Q +HSV D+G V++ G G+
Sbjct: 342 FGYNYRGQLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQ 401
Query: 94 LGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
LG G V+ K + + + Q H+V L V CG N + QLGL
Sbjct: 402 LGSG---DVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLES 458
Query: 154 PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIH-AGQ--LGHSPVT 209
S + L +Q + V CG +H++V ++ E V+ FG + GQ LGH+
Sbjct: 459 TESQ--RKFVAVKGKLDGAQ-VRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQR 515
Query: 210 VSSASVIEPKVQATIIR 226
V ++IE + + R
Sbjct: 516 VFGPTIIEGAQEKHVYR 532
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 106/261 (40%), Gaps = 21/261 (8%)
Query: 24 SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV 83
SS EV+ G N+ LG TR L+ + + V H+V + G V
Sbjct: 226 SSFHEREVWTCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLCSTGEV 285
Query: 84 WSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGL 143
++ G+ G+ G G+ V ++ + + + V A +H++ ++ G + G
Sbjct: 286 YTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQV-HAYNGCEHTLVVLDDGQMMSFGY 344
Query: 144 NSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-G 201
N QLG S P P P L + + C +HSV+ EVYTFG + G
Sbjct: 345 NYRGQLGQGNTSSE---PVPKPVRGLNGIR-VTQASCSYYHSVIACDNGEVYTFGRNDFG 400
Query: 202 QLGHSPVTVSSASVIEPKVQATIIREDLPG-FIFESNRGTKHSFTAETSLGPEFGG---- 256
QLG S VI+ K+ + E L G I G H+ + +G + G
Sbjct: 401 QLG-------SGDVIDRKLPCLV--ESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDY 451
Query: 257 GWTGKKGKRLRSKLEAVKQKV 277
G G + + K AVK K+
Sbjct: 452 GQLGLESTESQRKFVAVKGKL 472
>gi|406604431|emb|CCH44090.1| Inhibitor of Bruton tyrosine kinase [Wickerhamomyces ciferrii]
Length = 1399
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 29/198 (14%)
Query: 30 EVYIWGTNANYNLGTGSQQTR-------DVPE---------LLDSLKRASIKQVCMDKFH 73
EV+ +G N N +LGTG + D+ + + L + IK + + K H
Sbjct: 158 EVFTFGINVNNHLGTGDSDDKLKTPYRVDIENKRLDNYNLSIAERLVKPRIKDIKISKNH 217
Query: 74 SVFVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVF 131
S+ ++++ G + G+ GRLG G + +L + D VA IS DH++
Sbjct: 218 SIILTNETKGNLLIAGNPSRGRLGHGKSTPNYKFTELEYFADDHITNVA---ISDDHTLV 274
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI----PRSSLKSSQPLI--GVCCGRFHS 185
L +G V+ GLN++ +LG P I T P+ +++ + L G+ C + HS
Sbjct: 275 LTSNGEVYSWGLNNYLELGY--PTDRIKEKTDTFSNEPKRIIQTLKKLDVQGISCSKIHS 332
Query: 186 VVYSSREVYTFGIHAGQL 203
+S + +G++ GQ+
Sbjct: 333 AAFSDYTLVLWGLNIGQM 350
>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
Length = 538
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 30/277 (10%)
Query: 8 EMRPIDHLIRDRKIDVS---------SNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
E R ID L + + +D+ ++Y WG N LG GS P+L+ +
Sbjct: 71 EPRKIDILCKKKIVDIGYGSGPHVLVCTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITT 130
Query: 59 --LKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
+ R +K C HS+ ++ +G V++ G+ G++G G+ ++ +P+K+ K
Sbjct: 131 NLIGRKVVKVAC-GSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRK 189
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
V + Q S+ L+ +G V+ G N QLG+ +++ P P ++L+ ++
Sbjct: 190 --VTEIACGQTSSMALLDNGEVYGWGYNGNGQLGVG---NNVNQPNPCRVAALQ-QMIVV 243
Query: 177 GVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIF 234
+ CG H++ + VY +G ++ GQLG T + A+++ P T I D F+
Sbjct: 244 QIVCGYAHAMALTDEGSVYAWGANSYGQLG----TGNKANLVTP----TKIALDKGRFVE 295
Query: 235 ESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLE 271
H +A T G + W +G+ + S +E
Sbjct: 296 IGATHYNHVSSAITQTGKVY--MWGQCRGQSITSPME 330
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 8/181 (4%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWS 85
Q ++VY G+N + LG G Q+ P +D L + I + H + +D+G ++S
Sbjct: 46 QDDDVYALGSNCSSCLGVGDAQSGLEPRKIDILCKKKIVDIGYGSGPHVLVCTDNGDLYS 105
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
GH +LG GS + +SP+ + K V + HS+ L L G VF G N+
Sbjct: 106 WGHNGYSQLGNGSTNQGLSPQLITTNLIGRK--VVKVACGSHHSLALTLEGEVFAWGYNN 163
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQL 203
Q+G + TP ++ ++ + + CG+ S+ + + EVY +G + GQL
Sbjct: 164 CGQVGSGTTTNQ---ATPRKVAACLGTRKVTEIACGQTSSMALLDNGEVYGWGYNGNGQL 220
Query: 204 G 204
G
Sbjct: 221 G 221
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LLD +SIKQ C+ ++ ++ D V++ G LG+G S + P+K++
Sbjct: 19 LLDPEFISSIKQACVFGSSGNEAIVITQDDDVYALGSNCSSCLGVGDAQSGLEPRKIDIL 78
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
K + + S H + +G ++ G N + QLG + + +SP I + +
Sbjct: 79 CKKKIVDIGYG--SGPHVLVCTDNGDLYSWGHNGYSQLG-NGSTNQGLSPQLITTNLI-- 133
Query: 172 SQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHSPVT 209
+ ++ V CG HS+ + EV+ +G + GQ+G T
Sbjct: 134 GRKVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTT 173
>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
Length = 345
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L+ L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
H +LG G+ + ++P ++ + V + HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGIAPIQVCTNLLIKQ--VVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 159 QVGSGSTANQ---PTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG---QTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++++++SP + EK++
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P ++ + L + + + S+ V D+G V+ G+
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SP I
Sbjct: 265 LG-TGNKNNLLSPAHI 279
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+DD V+ G LG G S + PKKL E
Sbjct: 12 LLSPQEIASIRKACVFGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKL--E 69
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
K +++ S H + G V+ G N + QLG I PI +
Sbjct: 70 GLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGI---APIQVCTNLL 126
Query: 172 SQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ ++ V CG HS+ ++ EV+ +G + GQ+G
Sbjct: 127 IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG 161
>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
Length = 744
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N + LG G+ TR VP + L + I V HS+ + DG VW+ G
Sbjct: 215 VWAWGENYDGQLGDGTTVTRRVPVPIQGL--SGIVAVASGTSHSLALRYDGNVWAWGSNY 272
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG GS S SP ++ + G+ D+S+ + G+V+ G+N++ QLG
Sbjct: 273 SGQLGDGSSLSRSSPVQV-----TELSGIVSVEGGPDYSMAVRYDGTVWTWGINTYGQLG 327
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY-SSREVYTFG 197
+ I P+ S L ++ V GR H++ ++ ++ +G
Sbjct: 328 ---DGTTIARSVPVQTSGLSG---VVAVAAGRTHALAMRANNSIWAWG 369
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 20/193 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++ WG N LG G+ + R P E+L ++ V + HS+ V DDG +W+ G
Sbjct: 413 LWAWGANNEGQLGDGTTKNRWAPAEVL-----GNVVSVAAGRRHSLAVRDDGSLWAWGSN 467
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G+ SS P ++ G+A + D+SV L +++ G NS+ QL
Sbjct: 468 TVGQLGDGTGSSRTIPMQV-----PGISGIASVAAGSDYSVALRYDRTLWAWGENSYGQL 522
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIH-AGQLGHSP 207
G + V PT + + ++ + G H + V S+ V+ +G + +GQLG
Sbjct: 523 GDGTTVNRHV-PTRV-----QGLSGIVAIATGNGHMLAVRSNGTVWAWGDNSSGQLGDG- 575
Query: 208 VTVSSASVIEPKV 220
T++ A+ ++ +V
Sbjct: 576 TTINRATPVQVQV 588
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 22/195 (11%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N + LG G+ TR P + L + + V + HS+ + DG VW+ G
Sbjct: 115 VWAWGRNDDGQLGDGTLSTRGDPVQVQGL--SGVTTVALGATHSLALCYDGSVWAWGAND 172
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG G+ + +P+ + ++ V + +HS+ ++ G+V+ G N QLG
Sbjct: 173 HGQLGDGTSIARRTPQMVAGLQE-----VVAVAAGANHSLAVLSDGTVWAWGENYDGQLG 227
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGH--- 205
+ + P+P L ++ V G HS+ V+ +G ++GQLG
Sbjct: 228 ---DGTTVTRRVPVPIQGLSG---IVAVASGTSHSLALRYDGNVWAWGSNYSGQLGDGSS 281
Query: 206 ----SPVTVSSASVI 216
SPV V+ S I
Sbjct: 282 LSRSSPVQVTELSGI 296
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG N + LG G+ R P+++ L+ + V HS+ V DG VW+ G
Sbjct: 164 SVWAWGANDHGQLGDGTSIARRTPQMVAGLQE--VVAVAAGANHSLAVLSDGTVWAWGEN 221
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G+ + P + + G+ + HS+ L G+V+ G N QL
Sbjct: 222 YDGQLGDGTTVTRRVPVPI-----QGLSGIVAVASGTSHSLALRYDGNVWAWGSNYSGQL 276
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
G S + +P+ + L ++ V G +S+ V V+T+GI+ GQLG
Sbjct: 277 G---DGSSLSRSSPVQVTELSG---IVSVEGGPDYSMAVRYDGTVWTWGINTYGQLG 327
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 8/140 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG G+ R VP + + S V K HS+ V DG +W G
Sbjct: 611 LWAWGINNTSQLGDGTGIPRLVPTQVQGI--GSAVAVSAAKHHSLAVLADGTLWDWGANN 668
Query: 91 GGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG +++ +P K+ + +G SI HS+ L G + G N++ QL
Sbjct: 669 YGQLGRNQDNTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQL 728
Query: 150 GLSPPPSHIVSPTPIPRSSL 169
G P + P+P SL
Sbjct: 729 GTGVPEN-----IPVPVLSL 743
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHS 129
D F S+ V DG VW+ G G+LG G+ S+ P ++ + GV ++ HS
Sbjct: 103 DDF-SMAVRSDGTVWAWGRNDDGQLGDGTLSTRGDPVQV-----QGLSGVTTVALGATHS 156
Query: 130 VFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VY 188
+ L GSV+ G N QLG + I TP + L Q ++ V G HS+ V
Sbjct: 157 LALCYDGSVWAWGANDHGQLG---DGTSIARRTPQMVAGL---QEVVAVAAGANHSLAVL 210
Query: 189 SSREVYTFG-IHAGQLG 204
S V+ +G + GQLG
Sbjct: 211 SDGTVWAWGENYDGQLG 227
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 19/176 (10%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG G+ R VP L + + V + H++ + + +W+ G
Sbjct: 315 VWTWGINTYGQLGDGTTIARSVPVQTSGL--SGVVAVAAGRTHALAMRANNSIWAWGGNV 372
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+ G S S SP+ + E V MA+ + DHS+ + G ++ G N+ QLG
Sbjct: 373 NGQRGDESRSVYFSPRTILNEV------VTMAA-TNDHSLAVRSDGGLWAWGANNEGQLG 425
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
+ P L + ++ V GR HS+ V ++ +G + GQLG
Sbjct: 426 DGTTKNRWA-----PAEVLGN---VVSVAAGRRHSLAVRDDGSLWAWGSNTVGQLG 473
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N++ LG G+ R P + L HS+ V DG +W+ G
Sbjct: 561 VWAWGDNSSGQLGDGTTINRATPVQVQVLSGIVAVAAG--AAHSLAVRYDGTLWAWGINN 618
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMA-SISQDHSVFLMLSGSVFVCGLNSFHQL 149
+LG G+ + P ++ +G A+A S ++ HS+ ++ G+++ G N++ QL
Sbjct: 619 TSQLGDGTGIPRLVPTQVQ------GIGSAVAVSAAKHHSLAVLADGTLWDWGANNYGQL 672
Query: 150 G-----LSPPPSHIVSPTPIPRS 167
G +P PS + + T + +
Sbjct: 673 GRNQDNTNPTPSKVTTLTGVTEA 695
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N ++ WG N N G S+ P + L D HS+ V DG +W+ G
Sbjct: 363 NSIWAWGGNVNGQRGDESRSVYFSPRTI--LNEVVTMAATND--HSLAVRSDGGLWAWGA 418
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLG-VAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LG G+ + +P ++ LG V + + HS+ + GS++ G N+
Sbjct: 419 NNEGQLGDGTTKNRWAPAEV--------LGNVVSVAAGRRHSLAVRDDGSLWAWGSNTVG 470
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLG 204
QLG S + P +P S +S V G +SV R ++ +G ++ GQLG
Sbjct: 471 QLGDGTGSSRTI-PMQVPGISGIAS-----VAAGSDYSVALRYDRTLWAWGENSYGQLG 523
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++ WG+N LG G+ +R +P + + + I V +SV + D +W+ G
Sbjct: 460 SLWAWGSNTVGQLGDGTGSSRTIPMQVPGI--SGIASVAAGSDYSVALRYDRTLWAWGEN 517
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG G+ + P ++ + G+ + H + + +G+V+ G NS QL
Sbjct: 518 SYGQLGDGTTVNRHVPTRV-----QGLSGIVAIATGNGHMLAVRSNGTVWAWGDNSSGQL 572
Query: 150 G 150
G
Sbjct: 573 G 573
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 10 RPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQV 67
R I + ++ + ++ +Q +VY WG N LG + ++ PEL++ L+ IKQ+
Sbjct: 76 RNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQI 135
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLG--LGSESSVVSPKKLNFEKDK----------- 114
FH +S DG +++ G+ G+LG + +S+ V K+ N D
Sbjct: 136 SCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQ 195
Query: 115 --DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
+ + S +V L +G V+ G + QLG + P IP
Sbjct: 196 SLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKIP-----DL 250
Query: 173 QPLIGVCCG-RFHSVVYSSREVYTFGIHA-GQLGHS 206
Q +I + CG +F + V SS +VYT+G + GQLG++
Sbjct: 251 QNIINIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNN 286
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N+V I N NY+ GS +P + SL KQV +V ++++G V+S G+
Sbjct: 171 NKVEIKRGNQNYDYAEGSM----LPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGN 226
Query: 89 GQGGRLGLGSESS-VVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LG SE + PKK+ D + Q S + SG V+ G N
Sbjct: 227 SMKGQLGYQSEETGNFQPKKI-----PDLQNIINIDCGQQFSAAVSSSGKVYTWGNNDHG 281
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSREVYTFGI-HAGQLGH 205
QLG + I P + ++ +I + CG F + + + +++T+G + GQLGH
Sbjct: 282 QLGNNQS---IYQARPNQVTGFGGNK-IINISCGDNFIAALSNEGKLFTWGYGNDGQLGH 337
Query: 206 S 206
S
Sbjct: 338 S 338
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGH 88
+VY WG N + LG + P + I + C D F + +S++G++++ G+
Sbjct: 271 KVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAA-LSNEGKLFTWGY 329
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG + + + +PK++ F++ + H+ FL + +++ G + Q
Sbjct: 330 GNDGQLGHSNRNDLYAPKQIEFKEK-----IIKVDCGGTHTAFLTQNNQLYLFGRGNEGQ 384
Query: 149 LGLSPPPSHIVSPTPIPR-SSLKSSQPLIGVCCG 181
LG+ + P+ ++ V CG
Sbjct: 385 LGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCG 418
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 31/198 (15%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG LG ++ + P+ ++ L +I +V +K S+ +S DG+V++ G +
Sbjct: 45 VYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNK 104
Query: 91 GGRLGLGSESS--VVSP----KKLNFEKDKDKLG-VAMASISQDHSVFLMLSGSVFVCGL 143
GG LG +S ++ P K N + + G MA+ISQD G ++ G
Sbjct: 105 GGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQD--------GELYTWGN 156
Query: 144 NSFHQLGLS-PPPSHIV--------------SPTPIPRSSLKSSQPLIGVCCGRFHSVVY 188
+LG S+ V S P SL + C G+F V+
Sbjct: 157 KDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLT 216
Query: 189 SSREVYTFG-IHAGQLGH 205
+ EVY+FG GQLG+
Sbjct: 217 ENGEVYSFGNSMKGQLGY 234
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG S+ ++ PEL+ +L I V + HSV +SD G+V+S G G
Sbjct: 54 EVYTCGLNTKGQLGHESEGSK--PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAG 111
Query: 90 QGGRLGLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL + E +V P+ + K ++ + S H + L G F G NS+ Q
Sbjct: 112 SDGQLGLTTIEDAVTVPRLI---KKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLGHS 206
LGL SP R PL V G HS S S V+ +G + +GQLG S
Sbjct: 169 LGLGKECPSQASPQ---RVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLS 225
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDVPE--LLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG ++ G GS +PE + + ++K+V HSVF+ +DG V++CG
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+LG SE S P+ + + + VA + HSV L G VF G S QLGL
Sbjct: 64 GQLGHESEGS--KPELIGALAGQHIVHVACG---ESHSVALSDQGQVFSWGAGSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVT 209
+ + P I + + Q ++ + CG +H + ++ + +T+G ++ GQLG
Sbjct: 119 TTIEDAVTVPRLIKK---LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKEC 175
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
S AS P+ ++ + +P + + G HSF S G FG G
Sbjct: 176 PSQAS---PQRVKSL--DGIP--LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 81/184 (44%), Gaps = 21/184 (11%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+ + WG N+ LG G + ++ P+ + SL + QV HS +S G V+ G
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGK 216
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL E SP + + + V S ++H+ L SG VF G S Q
Sbjct: 217 NSSGQLGLSDERDRESPCHVKLLRSQK---VVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIG-----VCCGRFHSVVY--SSREVYTFGIHA- 200
LG + PR L+ L+G + CGR H++ + SS +Y FG
Sbjct: 274 LGHDSMNDEVN-----PRRVLE----LMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTR 324
Query: 201 GQLG 204
GQLG
Sbjct: 325 GQLG 328
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 71/137 (51%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N++ LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSV-FLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G ++ I+ + H++ F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>gi|397486789|ref|XP_003814505.1| PREDICTED: protein RCC2 [Pan paniscus]
Length = 507
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 146 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 202
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 203 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 258
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 259 NLYSFGCPEYGQLGHN 274
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 155 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 214
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 215 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 270
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 271 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 330
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 331 DSQKRVFSWGFGGYGRLGHA 350
>gi|392573148|gb|EIW66289.1| hypothetical protein TREMEDRAFT_45779 [Tremella mesenterica DSM
1558]
Length = 1381
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 29/201 (14%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL------------DSLKRAS---IKQVCMDKFH 73
++++WG N N+ LGTG + P+ + D KR S ++ V M K H
Sbjct: 168 TDLFVWGVNRNFALGTGDSTDKAYPDRVNLQSQDQFNGHPDPTKRFSHVGVQDVVMGKLH 227
Query: 74 SVFVSDDGR--VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVF 131
+ ++ + R + CG G GRLG S+ S L D +++A + DH++
Sbjct: 228 TGVITSENRGNLSLCGFGSNGRLG----RSIHSQLSLLPMADLPHTIISIA-LGPDHTLA 282
Query: 132 LMLSGSVFVCGLNSFHQLG--LSPPPSHIVSPTPIPRSSLKSSQPLI-----GVCCGRFH 184
L G + G N F QLG + P I + S + PL GV GR
Sbjct: 283 LTSGGYILSWGRNRFAQLGYVMDPSDKPIDMDGQVQMSPRRIVGPLKKEFVRGVAAGRMA 342
Query: 185 SVVYSSREVYTFGIHAGQLGH 205
S +++ V+T+G + G LG+
Sbjct: 343 SACWTADAVWTWGTNGGNLGY 363
>gi|195997967|ref|XP_002108852.1| hypothetical protein TRIADDRAFT_19228 [Trichoplax adhaerens]
gi|190589628|gb|EDV29650.1| hypothetical protein TRIADDRAFT_19228 [Trichoplax adhaerens]
Length = 476
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
Y WG LG G+ + + P ++++LK SI + C S+F+S++G + +CG G
Sbjct: 353 AYSWGNGCMGQLGHGNLMSYERPTMIENLKGKSIYRACCGNRFSIFLSENGIIMTCGAGN 412
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G LG G + P+ + KD ++ S +H + L G+VF G S+ QLG
Sbjct: 413 SGCLGHGGWTPYTIPRLIESLLSKD---ISSISCGNEHVMALTTDGTVFTWGTGSYGQLG 469
Query: 151 L 151
L
Sbjct: 470 L 470
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 49 TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKL 108
T + + D R Q+ + H V +S D +S G+G G+LG G+ S P +
Sbjct: 319 TNIIMDQCDLPSRKCFIQLAVGSSHVVAISSDRTAYSWGNGCMGQLGHGNLMSYERPTMI 378
Query: 109 NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR-- 166
K K + A S+FL +G + CG + LG +P IPR
Sbjct: 379 ENLKGK---SIYRACCGNRFSIFLSENGIIMTCGAGNSGCLGHGG-----WTPYTIPRLI 430
Query: 167 SSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG 204
SL S+ + + CG H + ++ V+T+G + GQLG
Sbjct: 431 ESLL-SKDISSISCGNEHVMALTTDGTVFTWGTGSYGQLG 469
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 42 LGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSE 99
LG G +P L++SL I + H + ++ DG V++ G G G+LGLG E
Sbjct: 416 LGHGGWTPYTIPRLIESLLSKDISSISCGNEHVMALTTDGTVFTWGTGSYGQLGLGDE 473
>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1711
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTR-DVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
Y WG N LG + T+ VP+L++SLK ++ + HS ++D G +++ G
Sbjct: 430 AYSWGYNDRGQLGHENLTTKVHVPKLIESLKDKKLRYASVSYHHSAVITDSGELYAFGMN 489
Query: 90 QGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +P+ + FE + ++M + H++ +G +F CG N + Q
Sbjct: 490 DCGQLGLDHTQHQSTPQLVKGFEGTE----ISMVACGLYHTIICTATGGLFACGKNDYGQ 545
Query: 149 LGLSPPPS-HIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLG 204
LGL + S +P + V G +HSVV + S ++FG + GQLG
Sbjct: 546 LGLGHNRQIKVASLVSLPNEMVSY------VASGYYHSVVVTNSGRTFSFGRNDYGQLG 598
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 16 IRDRKIDVSSNQFN---------EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQ 66
++D+K+ +S ++ E+Y +G N LG Q + P+L+ + I
Sbjct: 459 LKDKKLRYASVSYHHSAVITDSGELYAFGMNDCGQLGLDHTQHQSTPQLVKGFEGTEISM 518
Query: 67 VCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ 126
V +H++ + G +++CG G+LGLG + ++ + V+ +
Sbjct: 519 VACGLYHTIICTATGGLFACGKNDYGQLGLGHNRQIKVASLVSLPNEM----VSYVASGY 574
Query: 127 DHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV 186
HSV + SG F G N + QLG+ H P + +L ++ ++ CG +H+V
Sbjct: 575 YHSVVVTNSGRTFSFGRNDYGQLGIG-NKVHQNVPNVV---ALSANTRMVRATCGCYHTV 630
Query: 187 VYSSR-EVYTFGI-HAGQLGH 205
+ S + +V+ FG + GQLG+
Sbjct: 631 LLSEQGQVFVFGRNNKGQLGN 651
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 71/176 (40%), Gaps = 3/176 (1%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E+Y G N+ LGTG R + I+QV +++DG V +CG
Sbjct: 322 ELYSCGQNSYGELGTGDDIERHQLTSISLCGWDDIRQVASGNETLAVLTNDGVVLTCGLN 381
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+ G G V + ++ AS +H + L SG + G N QL
Sbjct: 382 KSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQL 441
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIH-AGQLG 204
G + + P I SLK + +V+ S E+Y FG++ GQLG
Sbjct: 442 GHENLTTKVHVPKLI--ESLKDKKLRYASVSYHHSAVITDSGELYAFGMNDCGQLG 495
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H + ++D G +S G+ G+LG + ++ V KL E KDK + AS+S HS +
Sbjct: 420 HMIALTDSGLAYSWGYNDRGQLGHENLTTKVHVPKL-IESLKDK-KLRYASVSYHHSAVI 477
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE 192
SG ++ G+N QLGL TP + ++ + V CG +H+++ ++
Sbjct: 478 TDSGELYAFGMNDCGQLGLDHTQHQ---STPQLVKGFEGTE-ISMVACGLYHTIICTA-- 531
Query: 193 VYTFGIHA------GQLG 204
T G+ A GQLG
Sbjct: 532 --TGGLFACGKNDYGQLG 547
>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
Length = 531
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L++L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + ++P ++ K + VA S HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS---HHSMALAADGEVFAWGYNNC 157
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 158 GQVGSGSTANQ---PTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG---QTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++++++SP + EK++
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P ++ + L + + + S+ V D+G V+ G+
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SP I
Sbjct: 265 LG-TGNKNNLLSPAHI 279
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+D V+ G LG G S + PKKL
Sbjct: 12 LLSPQEVASIRKACVFGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKL--- 68
Query: 112 KDKDKLGVAMASISQDHSVFLMLS---GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
+ G + S+S ++LS G V+ G N + QLG I PI +
Sbjct: 69 --EALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGI---APIQVCT 123
Query: 169 LKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ ++ V CG HS+ ++ EV+ +G + GQ+G
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG 161
>gi|351710402|gb|EHB13321.1| Serine/threonine-protein kinase Nek8 [Heterocephalus glaber]
Length = 709
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 17/187 (9%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+ +G+ +N LG GS P ++++L + QV H + +S + +++ G G
Sbjct: 424 IMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGD 483
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLGLG+ S P+++ ++ V D S+ L + G CG N F++LG
Sbjct: 484 RGRLGLGTRESHSCPQQVPMPPGQEAQWVVCGI---DSSMILTVRGRALACGSNRFNKLG 540
Query: 151 L--------SPPPSHI---VSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI 198
L + P + +S TP+ RS+ +PL+ V G HS V +S + YTFG
Sbjct: 541 LDHFSLGEEADPQQQVEEALSFTPL-RSAPLDQEPLLIVDLGTAHSAAVTASGDCYTFGS 599
Query: 199 HA-GQLG 204
+ GQLG
Sbjct: 600 NQHGQLG 606
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 15/187 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E++ WG LG G++++ P+ + + V S+ ++ GR +CG
Sbjct: 475 ELFAWGRGDRGRLGLGTRESHSCPQQVPMPPGQEAQWVVCGIDSSMILTVRGRALACGSN 534
Query: 90 QGGRLGLG--SESSVVSPKK-----LNFEKDK----DKLGVAMASISQDHSVFLMLSGSV 138
+ +LGL S P++ L+F + D+ + + + HS + SG
Sbjct: 535 RFNKLGLDHFSLGEEADPQQQVEEALSFTPLRSAPLDQEPLLIVDLGTAHSAAVTASGDC 594
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI 198
+ G N QLG + + S P L+ + + C F + + EVY++G
Sbjct: 595 YTFGSNQHGQLGTN---ARRGSRAPCQVQGLEGIKMAMVACGDAFTVAIGAEGEVYSWGK 651
Query: 199 HA-GQLG 204
A G+LG
Sbjct: 652 GARGRLG 658
>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
Length = 709
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRD----VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWS 85
+VY+WG + + G SQ+ +D P LL S IKQ+ FHS+ + D+G ++S
Sbjct: 191 QVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYS 250
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMA-----SISQDHSVFLMLSGSVFV 140
G G+ G G G +P+++ F K + +I+ D+ V+ G
Sbjct: 251 WGVGEKGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQ 310
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSS-------------LKSSQPLIGVCCGRFHSVV 187
CG F + P + P+ +S K + + G H++V
Sbjct: 311 CGFGEFENTAI---PQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLV 367
Query: 188 Y-SSREVYTFGIH-AGQLGHSPV 208
SS ++++FG + GQLGH+ V
Sbjct: 368 LTSSGQIFSFGYNQQGQLGHNTV 390
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 39/186 (20%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELL-------------DSLKRA---------SIKQ 66
N+VY WG G G + +P+L+ DS+++ IKQ
Sbjct: 298 NQVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQ 357
Query: 67 VCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ 126
+ + H++ ++ G+++S G+ Q G+LG + + PK + + + VA +
Sbjct: 358 IAAGEMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAG---R 414
Query: 127 DHSVFLMLSGSVFVCGLNSFHQLGLSPPP-----SHIVSPTPIPRSSLKSSQPLIGVCCG 181
+HS+ L V+ CG N + Q GL SH++S + +S K + G
Sbjct: 415 NHSLCLTNKNDVYACGNNQYGQCGLPDREMRKTFSHVLSLLSV--NSFK-------LYAG 465
Query: 182 RFHSVV 187
FHS V
Sbjct: 466 GFHSWV 471
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 25/195 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG G G + ++ P+ + I Q+ H++ ++ D +V++ G G+
Sbjct: 248 LYSWGVGEKGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGR 307
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD-------------------HSVF 131
G+ G G + P+ +NF + S+ Q+ H++
Sbjct: 308 YGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLV 367
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR 191
L SG +F G N QLG + ++ + K+ Q V GR HS+ +++
Sbjct: 368 LTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQ----VAAGRNHSLCLTNK 423
Query: 192 -EVYTFGIHA-GQLG 204
+VY G + GQ G
Sbjct: 424 NDVYACGNNQYGQCG 438
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 11/182 (6%)
Query: 31 VYIW--GTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
Y+W G N LGTG +PE + L + + + HS V++DG++W CG
Sbjct: 84 AYVWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGS 143
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDK--DKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
+LGL + + K F+ + ++ + + H++ L G V+V G +
Sbjct: 144 NLHDKLGL---EGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLH 200
Query: 147 HQLG-LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQL 203
++ G S P+ S + + + + CG FHS+ +Y++G+ G+
Sbjct: 201 NKRGDRSQERKDNAKYKPVLLQSF-AGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGEC 259
Query: 204 GH 205
GH
Sbjct: 260 GH 261
>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Ailuropoda melanoleuca]
Length = 348
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 8/179 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L++L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
H +LG G+ + ++P ++ + V + HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGIAPIQVCTNLLIKQ--VVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 159 QVGSGSTTNQ---PTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 156 NCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACG---QTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++++++SP + EK++
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P ++ + L + + + S+ V D+G V+ G+
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SP I
Sbjct: 265 LG-TGNKNNLLSPAHI 279
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P+ + S+++A + ++ +++V+D+ V+ G LG G S + PKKL
Sbjct: 15 PQEITSIRKACVFGTSANE--ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKL---- 68
Query: 113 DKDKLGVAMASISQDHSVFLMLS---GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSL 169
+ G + S+S ++LS G V+ G N + QLG I PI +
Sbjct: 69 -EALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGI---APIQVCTN 124
Query: 170 KSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHSPVT 209
+ ++ V CG HS+ ++ EV+ +G + GQ+G T
Sbjct: 125 LLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTT 166
>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
(POZ) domain containing protein 1 [Oryctolagus
cuniculus]
Length = 531
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L++L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + ++P ++ K + VA S HS+ L G V+ G N+
Sbjct: 101 HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS---HHSMVLAADGEVYAWGYNNC 157
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 158 GQVGSGSTANQ---PTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLG 214
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG---QTSSMAVLDNGEVYAWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYAWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++++++SP + EK++
Sbjct: 261 TYGQLGTGNKNNLLSPAHVMVEKER 285
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+D V+ G LG G S + PKKL
Sbjct: 12 LLSPQEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKL--- 68
Query: 112 KDKDKLGVAMASISQDHSVFLMLS---GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
+ G + S+S ++LS G V+ G N + QLG I PI +
Sbjct: 69 --EALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGI---APIQVCT 123
Query: 169 LKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ ++ V CG HS+V ++ EVY +G + GQ+G
Sbjct: 124 NLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVG 161
>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
Length = 677
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ +D G V++ G
Sbjct: 92 NKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGG 151
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++ F D + S + S L G +F+ G NS Q
Sbjct: 152 NNEGQLGLGDTDDRDTFHQIGFFTPSDI--IKQLSAGANTSAALTEDGKLFMWGDNSEGQ 209
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-IHAGQLG 204
+GL S++ P + +P+ + CG +HS V + E+YTFG G+LG
Sbjct: 210 IGLK-NKSNVCIP-----HEVTVGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLG 261
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 11/191 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASI-KQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G RD + + I KQ+ S +++DG+++ G
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTEDGKLFMWGDN 205
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL ++S+V P ++ K ++ S HS F+ G ++ G +L
Sbjct: 206 SEGQIGLKNKSNVCIPHEVTVGKP-----ISWISCGYYHSAFVTTDGELYTFGEPENGKL 260
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ L +I V CG H+VV + + VY FG+ GQ G +
Sbjct: 261 GL---PNQLLINHRSPQRVLGIPDKVIQVACGGGHTVVLTEKVVYAFGL--GQFGQLGLG 315
Query: 210 VSSASVIEPKV 220
EPK+
Sbjct: 316 TFLFETSEPKI 326
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 13/171 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++++WG N+ +G ++ +P + K I + +HS FV+ DG +++ G
Sbjct: 198 KLFMWGDNSEGQIGLKNKSNVCIPHEVTVGK--PISWISCGYYHSAFVTTDGELYTFGEP 255
Query: 90 QGGRLGLGSESSVV--SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
+ G+LGL ++ + SP+++ DK V + H+V L V+ GL F
Sbjct: 256 ENGKLGLPNQLLINHRSPQRVLGIPDK----VIQVACGGGHTVVLT-EKVVYAFGLGQFG 310
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV-YTFG 197
QLGL P I R Q + + CG H+ + + + YTFG
Sbjct: 311 QLGLGTFLFETSEPKIIDR---IKDQKISHISCGENHTALMTDIGLMYTFG 358
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+S++ P K L EK V +A+
Sbjct: 80 CGDE-HTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEK------VKLAAC 132
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ +G V+ G N+ QLGL
Sbjct: 133 GRNHTLVSTDTGGVYAAGGNNEGQLGL 159
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 31 VYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY +G LG G+ +T + P+++D +K I + + H+ ++D G +++ G
Sbjct: 301 VYAFGLGQFGQLGLGTFLFETSE-PKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGD 359
Query: 89 GQGGRLGLGSES 100
G+ G+LGLG E+
Sbjct: 360 GRHGKLGLGMEN 371
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 12/172 (6%)
Query: 30 EVYIWGTNANYNLGTGS-QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+VY+WG+N+ LG G Q++R P + +L ++ Q+ H + + ++G +++ G
Sbjct: 121 QVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGD 180
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSF 146
G+LG+G +V P+++ E + LG+ ++ I+ +HS+ L SG +FV G N F
Sbjct: 181 NGNGQLGIG---TVGEPQRVPVEV-TNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRF 236
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
QLGLS P +L+ Q + + G HS ++ V+TFG
Sbjct: 237 GQLGLSDNKDRAF---PTLLKTLR-QQHVKFIAAGGAHSAALTAHGGVFTFG 284
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 24/245 (9%)
Query: 35 GTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRL 94
G+N + LG T+ PE + +L+ I QVC + HS+ +++ G+V+ G G+L
Sbjct: 76 GSNDHDQLGQEVSTTK--PEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQL 133
Query: 95 GLGS-ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
G G + S +SP+ F K V + +H + L+ +G+++ G N QLG+
Sbjct: 134 GNGEGQESRLSPR---FVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGT 190
Query: 154 --PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
P + P+ ++L PL + CG HS+V S S ++ +G + GQLG S
Sbjct: 191 VGEPQRV----PVEVTNLLGL-PLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLS--- 242
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSK 269
+ P + T +R+ FI G HS A T+ G F GW+ + +R
Sbjct: 243 -DNKDRAFPTLLKT-LRQQHVKFI---AAGGAHS-AALTAHGGVFTFGWSFYESHEVRIS 296
Query: 270 LEAVK 274
L +
Sbjct: 297 LRGTE 301
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 52 VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
VP + L+ ++Q+ H++ ++ GRV SCG + LG E S P+ +
Sbjct: 41 VPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQ--LGQEVSTTKPEPVTAL 98
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
+ L + Q HS+ L +G V++ G NS QLG +SP + K+
Sbjct: 99 Q---CLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFV-----KT 150
Query: 172 SQP--LIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
P ++ + CG H + + ++ +Y +G + GQLG
Sbjct: 151 LAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLG 187
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 32/192 (16%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV----WSC 86
+++WG+N LG + R P LL +L++ +K + HS ++ G V WS
Sbjct: 228 IFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWSF 287
Query: 87 GHGQGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
R+ L G+ES+ S A+A +F ++ S
Sbjct: 288 YESHEVRISLRGTESNPQS---------------ALA-----RKLFSLIEREFCRHSYGS 327
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR--EVYTFGIHA-GQ 202
+ QLG + TP+ L + + + GR H+V Y+ +V+TFG+ GQ
Sbjct: 328 YGQLGHGSKNDQL---TPMKIQELMGTT-ITQIALGRCHTVCYAPTVGKVFTFGLGGNGQ 383
Query: 203 LGHSPVTVSSAS 214
LG S VS+ +
Sbjct: 384 LGSSVSMVSTPT 395
>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 1035
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ +D G V++ G
Sbjct: 92 NKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGG 151
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++ F D + S + S L G +F+ G NS Q
Sbjct: 152 NNEGQLGLGDTDDRDTFHQIGFFTPSDI--IKQLSAGANTSAALTEDGKLFMWGDNSEGQ 209
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL S++ P + +P+ + CG +HS V + E+YTFG G+LG
Sbjct: 210 IGLK-NKSNVCIPHEV-----TVGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLG 261
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 11/191 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASI-KQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G RD + + I KQ+ S +++DG+++ G
Sbjct: 146 VYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTEDGKLFMWGDN 205
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL ++S+V P ++ K ++ S HS F+ G ++ G +L
Sbjct: 206 SEGQIGLKNKSNVCIPHEVTVGKP-----ISWISCGYYHSAFVTTDGELYTFGEPENGKL 260
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ L +I V CG H+VV + + VY FG+ GQ G +
Sbjct: 261 GL---PNQLLINHRSPQRVLGIPDKVIQVACGGGHTVVLTEKVVYAFGL--GQFGQLGLG 315
Query: 210 VSSASVIEPKV 220
EPK+
Sbjct: 316 TFLFETSEPKI 326
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+++WG N+ +G ++ +P + K I + +HS FV+ DG +++ G +
Sbjct: 199 LFMWGDNSEGQIGLKNKSNVCIPHEVTVGK--PISWISCGYYHSAFVTTDGELYTFGEPE 256
Query: 91 GGRLGLGSESSV--VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL ++ + SP+++ DK V + H+V L V+ GL F Q
Sbjct: 257 NGKLGLPNQLLINHRSPQRVLGIPDK----VIQVACGGGHTVVLT-EKVVYAFGLGQFGQ 311
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV-YTFGI-HAGQLG 204
LGL P I R Q + + CG H+ + + + YTFG G+LG
Sbjct: 312 LGLGTFLFETSEPKIIDRI---KDQKISHISCGENHTALMTDIGLMYTFGDGRHGKLG 366
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 31 VYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY +G LG G+ +T + P+++D +K I + + H+ ++D G +++ G
Sbjct: 301 VYAFGLGQFGQLGLGTFLFETSE-PKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGD 359
Query: 89 GQGGRLGLGSES 100
G+ G+LGLG E+
Sbjct: 360 GRHGKLGLGMEN 371
>gi|114554345|ref|XP_513117.2| PREDICTED: protein RCC2 [Pan troglodytes]
Length = 488
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 127 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 183
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 184 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 239
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 240 NLYSFGCPEYGQLGHN 255
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 136 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 195
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 196 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 251
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 252 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 311
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 312 DSQKRVFSWGFGGYGRLGHA 331
>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Canis lupus familiaris]
Length = 531
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L++L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + ++P ++ K + VA S HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS---HHSMALAADGEVFAWGYNNC 157
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 158 GQVGSGSTTNQ---PTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 156 NCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACG---QTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++++++SP + EK++
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P ++ + L + + + S+ V D+G V+ G+
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SP I
Sbjct: 265 LG-TGNKNNLLSPAHI 279
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+D+ V+ G LG G S + PKKL
Sbjct: 12 LLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKL--- 68
Query: 112 KDKDKLGVAMASISQDHSVFLMLS---GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
+ G + S+S ++LS G V+ G N + QLG I PI +
Sbjct: 69 --EALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGI---APIQVCT 123
Query: 169 LKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHSPVT 209
+ ++ V CG HS+ ++ EV+ +G + GQ+G T
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTT 166
>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Homo sapiens]
Length = 310
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 18/193 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTV 210
+PVTV
Sbjct: 293 NKSNQSYPTPVTV 305
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATTEGEVFT 122
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 179
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQ
Sbjct: 180 NSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 203 LG 204
LG
Sbjct: 237 LG 238
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 50/85 (58%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG N N LG G+ + P + +L+ +++V H++ ++D+G+V++ G
Sbjct: 225 EVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGAN 284
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++S+ P + EKD+
Sbjct: 285 SYGQLGTGNKSNQSYPTPVTVEKDR 309
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI-- 100
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 101 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 157
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Loxodonta africana]
Length = 1100
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 50 NKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHTLVSTEGGNVYATGG 109
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG S ++F + K + S + S L G +F+ G NS Q
Sbjct: 110 NNEGQLGLGDTEERNSFHLISFFTSRHK--IKQLSAGANISAALTEDGELFMWGDNSEGQ 167
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL+ +S +PR + +P+ + CG +HS V ++YTFG G+LG
Sbjct: 168 IGLNS-----ISNVYVPR-QVTVGKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLG 219
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 12 IDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDK 71
I L I + + E+++WG N+ +G S VP + K I +
Sbjct: 138 IKQLSAGANISAALTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTVGK--PISWISCGY 195
Query: 72 FHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVF 131
+HS FV+ +G++++ G + G+LGL SE + K +K V + H+V
Sbjct: 196 YHSAFVTMEGKLYTFGEPECGKLGLPSEQLINHRKPQLVSGISEK--VIQVACGGGHTVV 253
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIV-SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
L +V+ G F QLGL S I +P P +K Q + + CG H+ + +
Sbjct: 254 LT-EKAVYTFGQGRFGQLGLG---SFIFQAPEPAILEHVK-DQKIRHISCGENHTALITD 308
Query: 191 -REVYTFGI-HAGQLG 204
+YTFG G+LG
Sbjct: 309 VGHMYTFGDGRHGKLG 324
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ ++ + +++ G G+LGLGS+S+V P K L EK V +A+
Sbjct: 38 CGDE-HTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEK------VKLAAC 90
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N+ QLGL
Sbjct: 91 GRNHTLVSTEGGNVYATGGNNEGQLGL 117
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 31 VYIWGTNANYNLGTGS---QQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
VY +G LG GS Q P +L+ +K I+ + + H+ ++D G +++ G
Sbjct: 259 VYTFGQGRFGQLGLGSFIFQAPE--PAILEHVKDQKIRHISCGENHTALITDVGHMYTFG 316
Query: 88 HGQGGRLGLGSES 100
G+ G+LGLG E+
Sbjct: 317 DGRHGKLGLGLEN 329
>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
magnipapillata]
Length = 896
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 8/168 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG+N LG G +TR P L+ + I V +H++ ++ D +V+S G G
Sbjct: 517 VYSWGSNEYGQLGVGDTRTRYRPVLITHISSKQIVSVVCGAYHTLAITSDYKVYSWGWGV 576
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGL S + ++PK+++ D V A+ HS L V+ G + + QLG
Sbjct: 577 HGQLGLKSVENQLTPKQIDL---LDSHKVIQAAAGYAHSAVLTSQRYVYTFGADLYGQLG 633
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFG 197
+ ++ P + +L S + + CG F ++ S + ++ +G
Sbjct: 634 IGSHYKQVI-PQLVDSLTLDS---IYLISCGPFETIAISEDQTIFCWG 677
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 39/225 (17%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY WG + LG S + + P+ +D L + Q HS ++ V++ G
Sbjct: 568 KVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLTSQRYVYTFGAD 627
Query: 90 QGGRLGLGSESSVVSPKKLN-FEKDKDKL----GVAMASISQDHSVFLMLSGSVFVCGLN 144
G+LG+GS V P+ ++ D L +IS+D ++F C
Sbjct: 628 LYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQTIF---------CWGR 678
Query: 145 SFHQLGLSPPP----------------SHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY 188
++HQ + +H P + + P+ + CG +H ++
Sbjct: 679 NYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETL---QFQLQHPITQIFCGNWHYIIL 735
Query: 189 SS-REVYTFGIH-AGQLGHSPVTVSSASVIEPKVQATIIREDLPG 231
+S +VYT+G + GQLGH SA P++ +IR + G
Sbjct: 736 TSVNQVYTWGYNDCGQLGHYNKIDQSA----PRLVKALIRRAIIG 776
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N+VY WG N LG ++ + P L+ +L R +I V + SV D + + G
Sbjct: 739 NQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAFDADDNIMAWGR 798
Query: 89 GQGGRLGLGSESSV 102
G++G+ +E ++
Sbjct: 799 NDEGKIGIENEGNL 812
>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Otolemur garnettii]
Length = 531
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L++L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + ++P ++ K + VA S HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS---HHSMALAADGEVFAWGYNNC 157
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 158 GQVGSGSTANQ---PTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG---QTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++++++SP + EK++
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P ++ + L + + + S+ V D+G V+ G+
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SP I
Sbjct: 265 LG-TGNKNNLLSPAHI 279
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+D V+ G LG G S + PKKL
Sbjct: 12 LLSPQEIASIRKACVFGTSASEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKL--- 68
Query: 112 KDKDKLGVAMASISQDHSVFLMLS---GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
+ G + S+S ++LS G V+ G N + QLG I PI +
Sbjct: 69 --EALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGI---APIQVCT 123
Query: 169 LKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ ++ V CG HS+ ++ EV+ +G + GQ+G
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG 161
>gi|332025816|gb|EGI65973.1| X-linked retinitis pigmentosa GTPase regulator [Acromyrmex
echinatior]
Length = 771
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 23/176 (13%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKR-------ASIKQVCMDKFHSVFVSDDGRV 83
V WG+N LG +PE+ + + +K++ +HSVF+++ G +
Sbjct: 212 VVAWGSNLEGQLG--------LPEISGLVYKPMKVPIPEPVKEISAGYYHSVFLTESGLI 263
Query: 84 WSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
+ CG + G+LGL S+ V+PK++ L VA H+ L +G+++ G
Sbjct: 264 YICGESESGKLGLNINFSTQVAPKQMQL--PAPALHVACGG---HHTFILAENGNIYCSG 318
Query: 143 LNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFG 197
N+ QLG+ + +P +PR +L+ + +I + CG HS + + S +++T G
Sbjct: 319 SNASGQLGMGINVNETPTPKLLPRGALQDEK-IIKIVCGESHSAILTESGKLFTCG 373
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 96/226 (42%), Gaps = 26/226 (11%)
Query: 27 QFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
Q ++I+G+N LG G + P + LK + V + H++ + ++++C
Sbjct: 99 QTGRLFIFGSNDWGQLGLGHRNHISKPSCVKILKPERVTHVACGRAHTLICTGAQKIFAC 158
Query: 87 GHGQGGRLGLGSESSVV----SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
G Q G+ LG E+SV+ S L ++ + + HS+ L G V G
Sbjct: 159 GSNQEGQ--LGRENSVIGDSSSSPILIYDCGLAGPRIIQLAAGSHHSMALTSDGGVVAWG 216
Query: 143 LNSFHQLGLSPPPSHIVSP--TPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFG-I 198
N QLGL + P PIP +P+ + G +HSV + S +Y G
Sbjct: 217 SNLEGQLGLPEISGLVYKPMKVPIP-------EPVKEISAGYYHSVFLTESGLIYICGES 269
Query: 199 HAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSF 244
+G+LG + ++ ++ + PK + LP G H+F
Sbjct: 270 ESGKLG---LNINFSTQVAPK------QMQLPAPALHVACGGHHTF 306
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 8/167 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+YI G + + LG + V L ++ C H+ ++++G ++ G
Sbjct: 263 IYICGESESGKLGLNINFSTQVAPKQMQLPAPALHVAC-GGHHTFILAENGNIYCSGSNA 321
Query: 91 GGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G+LG+G + + +PK L +D+ + + + HS L SG +F CG +L
Sbjct: 322 SGQLGMGINVNETPTPKLLPRGALQDEKIIKIV-CGESHSAILTESGKLFTCGDGRHGKL 380
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVC----CGRFHSVVYSSR 191
GL +++ T + L S G C GR H + Y SR
Sbjct: 381 GLEENENNVHEVTFAVKYQELFVSNVACGGCHTILVGRRHEIDYQSR 427
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD 127
C D+ HS V GR++ G G+LGLG + + P + K + VA +
Sbjct: 89 CGDE-HSAVVCQTGRLFIFGSNDWGQLGLGHRNHISKPSCVKILKPERVTHVACG---RA 144
Query: 128 HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQP-LIGVCCGRFHSV 186
H++ + +F CG N QLG S +PI + P +I + G HS+
Sbjct: 145 HTLICTGAQKIFACGSNQEGQLGRENSVIGDSSSSPILIYDCGLAGPRIIQLAAGSHHSM 204
Query: 187 VYSSR-EVYTFGIH-AGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS- 243
+S V +G + GQLG + S V +P ++ +P + E + G HS
Sbjct: 205 ALTSDGGVVAWGSNLEGQLGLPEI---SGLVYKP------MKVPIPEPVKEISAGYYHSV 255
Query: 244 FTAETSLGPEFGGGWTGKKG 263
F E+ L G +GK G
Sbjct: 256 FLTESGLIYICGESESGKLG 275
>gi|70949528|ref|XP_744165.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524006|emb|CAH74665.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 426
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 23 VSSNQFNEVYIWGTNANY-----NLGTGSQQTRDVPELLDSLKR--ASIKQVCMDKFHSV 75
++ ++ N++Y WG N+ LG G++ P+ +++ + +C + HS+
Sbjct: 143 LAVDENNDLYSWGWGGNFFKGASGLGQGNKNNLMKPKKIEAFNNDNSEFINICCGEQHSL 202
Query: 76 FVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS 135
++ G+V+ CG G+ GRLG G+ + +++++ + + + + + S L +
Sbjct: 203 ALTKSGKVYGCGKGEFGRLGKGNHGDQLFFEEIDYFVNNNII-IKDIACGNSFSAALSNN 261
Query: 136 GSVFVCGLNSFHQLGLSPP----PSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR 191
G V+V G N + QLG+ SH V P + +++ + + + CG H + S
Sbjct: 262 GEVYVWGRNDYGQLGIENSIGDLYSHEVYPNKVKYFEIENIKIKL-IACGDNHMIACSES 320
Query: 192 EVYTFGIHAGQLGHSPVTVSSASVIEPKVQATIIREDL 229
+ F G A + PK Q ++I++++
Sbjct: 321 NIIYF------WGSRAWLEPKAITLNPKYQNSLIKKNI 352
>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
Length = 531
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L++L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + ++P ++ K + VA S HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGS---HHSMALAADGEVFAWGYNNC 157
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 158 GQVGSGSTTNQ---PTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 156 NCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACG---QTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++++++SP + EK++
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P ++ + L + + + S+ V D+G V+ G+
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SP I
Sbjct: 265 LG-TGNKNNLLSPAHI 279
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+D+ V+ G LG G S + PKKL
Sbjct: 12 LLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKL--- 68
Query: 112 KDKDKLGVAMASISQDHSVFLMLS---GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
+ G + S+S ++LS G V+ G N + QLG I PI +
Sbjct: 69 --EALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGI---APIQVCT 123
Query: 169 LKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHSPVT 209
+ ++ V CG HS+ ++ EV+ +G + GQ+G T
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTT 166
>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Papio anubis]
gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
protein 1 [Macaca fascicularis]
gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
Length = 531
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L+ L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
H +LG G+ + ++P ++ + V + HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGIAPIQVCTNLLIKQ--VVEVACGSHHSMALAADGEVFAWGYNNCG 158
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 159 QVGSGSTANQ---PTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG---QTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++++++SP + EK++
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG N +G+GS + P ++ + L + + + S+ V D+G V+ G+
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SP I
Sbjct: 265 LG-TGNKNNLLSPAHI 279
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+DD V+ G LG G S + PKKL E
Sbjct: 12 LLSPQEIASIRKACVFGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKL--E 69
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
K +++ S H + G V+ G N + QLG I PI +
Sbjct: 70 GLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGI---APIQVCTNLL 126
Query: 172 SQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ ++ V CG HS+ ++ EV+ +G + GQ+G
Sbjct: 127 IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG 161
>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
Length = 611
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 7/176 (3%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y G N LG G+ T L++ L + V FH+ V D+G + +CG
Sbjct: 141 LYTVGFNMRGQLGLGTATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCND 200
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG+G S + P+ +++ L VA Q ++V + G V G N QLG
Sbjct: 201 YGQLGMGDHSGHLVPRPVDYFFRHPVLAVA---CGQHYTVASLRDGGVVAFGKNDHGQLG 257
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIH-AGQLG 204
L ++ PT + ++ P + CG H+ +V VYTFG + GQLG
Sbjct: 258 LDRVSEPVLLPTRLAPPLDRAVVPQLS--CGYHHTAIVTEDGAVYTFGRNDYGQLG 311
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 8 EMRPIDHLIRDRKIDVSSNQFN--------EVYIWGTNANYNLGTGSQQTRDVPELLDSL 59
E ++ L R +DV+ + F+ +++ G N LG G VP +D
Sbjct: 162 EATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGDHSGHLVPRPVDYF 221
Query: 60 KRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESS-VVSPKKLNFEKDKDKLG 118
R + V + ++V DG V + G G+LGL S V+ P +L D+
Sbjct: 222 FRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPVLLPTRL--APPLDRAV 279
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR-SSLKSSQPLIG 177
V S H+ + G+V+ G N + QLGL H+ PTP+ S ++ +Q
Sbjct: 280 VPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLG-HKLHMARPTPVESLSRMRITQ---- 334
Query: 178 VCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATI 224
V CG +H++ S +V+ FG + GQLG +S + P++ +T+
Sbjct: 335 VACGCYHTLALSDDGKVFPFGRNNHGQLGLE----TSMDCLSPQLISTL 379
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY +G N LG G + P ++SL R I QV +H++ +SDDG+V+ G
Sbjct: 299 VYTFGRNDYGQLGLGHKLHMARPTPVESLSRMRITQVACGCYHTLALSDDGKVFPFGRNN 358
Query: 91 GGRLGLGSESSVVSPKKLNFEKDK 114
G+LGL + +SP+ ++ ++K
Sbjct: 359 HGQLGLETSMDCLSPQLISTLRNK 382
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H + +G +++ G G+LGLG+ ++V + K + VA S H+ +
Sbjct: 131 HLAALCANGFLYTVGFNMRGQLGLGTATTVTEATLVEELAGKRVVDVA---CSYFHTAIV 187
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE 192
M +G + CG N + QLG+ H+V P P+ P++ V CG+ H V S R+
Sbjct: 188 MDNGDLHACGCNDYGQLGMGDHSGHLV-PRPV---DYFFRHPVLAVACGQ-HYTVASLRD 242
Query: 193 --VYTFGIHA-GQLG 204
V FG + GQLG
Sbjct: 243 GGVVAFGKNDHGQLG 257
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 20/187 (10%)
Query: 10 RPIDHLIRDRKIDVSSNQFNEV--------YIWGTNANYNLGTG--SQQTRDVPELLDSL 59
RP+D+ R + V+ Q V +G N + LG S+ L L
Sbjct: 216 RPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPVLLPTRLAPPL 275
Query: 60 KRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGV 119
RA + Q+ H+ V++DG V++ G G+LGLG + + P + + ++ +
Sbjct: 276 DRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKLHMARPTPV---ESLSRMRI 332
Query: 120 AMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVC 179
+ H++ L G VF G N+ QLGL +SP I S+L++ V
Sbjct: 333 TQVACGCYHTLALSDDGKVFPFGRNNHGQLGLETSMD-CLSPQLI--STLRNKP----VA 385
Query: 180 CGRFHSV 186
G +HSV
Sbjct: 386 AGFYHSV 392
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 19/145 (13%)
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++S G G L LG + +P +++ + D V + + + L +G VF CG
Sbjct: 32 LFSFGQNTYGELALGDTNDRSTPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTCG 91
Query: 143 LNSFHQLGLSPP---PSHIVSPTPIPRSSLK-----SSQPLIGVCCGRFHSVVYSSREVY 194
N Q + PS SP +++ S+ L +C F +Y
Sbjct: 92 YNDSGQCAIGTTERVPSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGF---------LY 142
Query: 195 TFGIHA-GQLG-HSPVTVSSASVIE 217
T G + GQLG + TV+ A+++E
Sbjct: 143 TVGFNMRGQLGLGTATTVTEATLVE 167
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,447,002,882
Number of Sequences: 23463169
Number of extensions: 187160952
Number of successful extensions: 553654
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2462
Number of HSP's successfully gapped in prelim test: 2151
Number of HSP's that attempted gapping in prelim test: 518103
Number of HSP's gapped (non-prelim): 21021
length of query: 278
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 138
effective length of database: 9,074,351,707
effective search space: 1252260535566
effective search space used: 1252260535566
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)