BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5940
(278 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 124/208 (59%), Gaps = 8/208 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + +D +++DR V + +VY WG N N+ LG GSQ ++ PEL+D
Sbjct: 112 LYIQDKEGLSALDLVMKDRPTHVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ I KQV + KFHSVF+S G+V++CGHG GGRLG G E + + P+ + +
Sbjct: 172 FSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPPS P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLG 204
GV GRFH+V+++ VYT G++ GQLG
Sbjct: 288 GVAAGRFHTVLWTREAVYTMGLNGGQLG 315
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 161 bits (407), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 130/209 (62%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDR--KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D + P+D +++DR I ++ E+Y WG N N+ LG G+QQ++ PEL++
Sbjct: 113 LYIQDKDGYTPLDLVMKDRPPHIVFKTSDPTELYTWGDNVNFTLGHGTQQSKHHPELVEM 172
Query: 59 LKRAS--IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ IKQ+ + KFHSVF+S G+V++CGHGQGGRLG G E + + P+ + +
Sbjct: 173 FPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELTCLVPRLVEGLRGHPC 232
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN+FHQLG+ PPP + P I ++K + ++
Sbjct: 233 TQVAGA---KDHTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNVPRQIQAKTMK-GKTVL 288
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLG+
Sbjct: 289 GVAAGRFHTVLWTKDAVYTVGLNGGQLGY 317
>sp|Q6ZPR6|IBTK_MOUSE Inhibitor of Bruton tyrosine kinase OS=Mus musculus GN=Ibtk PE=1
SV=3
Length = 1352
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 126/209 (60%), Gaps = 8/209 (3%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDV--SSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
+ + D E + P+D L++DR V EVY WG N N+ LG GSQ ++ PELLD
Sbjct: 112 LYMQDKEGLSPLDLLMKDRPTHVVFKDTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDL 171
Query: 59 LKRASI--KQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDK 116
R+ + KQV + KFHSVF+S G+V++CGHG+GGRLG G E + + P+ + +
Sbjct: 172 FSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNC 231
Query: 117 LGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI 176
VA A +DH+V L G V+ GLN FHQLG+ PPP+ P I LK + +I
Sbjct: 232 SQVAAA---KDHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLK-GRTII 287
Query: 177 GVCCGRFHSVVYSSREVYTFGIHAGQLGH 205
GV GRFH+V+++ VYT G++ GQLGH
Sbjct: 288 GVAAGRFHTVLWTREAVYTLGLNGGQLGH 316
>sp|Q69ZR2|HECD1_MOUSE E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus GN=Hectd1 PE=1
SV=2
Length = 2618
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 778 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 835
>sp|Q9ULT8|HECD1_HUMAN E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens GN=HECTD1 PE=1
SV=3
Length = 2610
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 46/58 (79%), Positives = 53/58 (91%)
Query: 221 QATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKVR 278
QATI++EDLPGF+FESNRGTKHSFTAETSLG EF GWTGK+G++L+SKLE KQKVR
Sbjct: 777 QATILKEDLPGFVFESNRGTKHSFTAETSLGSEFVTGWTGKRGRKLKSKLEKTKQKVR 834
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 120/249 (48%), Gaps = 25/249 (10%)
Query: 23 VSSNQFNEVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSV 138
V+ G + G+LGLG++ SP+ L K LG+ ++ HS L LSG++
Sbjct: 157 EVFCWGQNKYGQLGLGTDCKKQTSPQLL-----KSLLGIPFMQVAAGGAHSFVLTLSGAI 211
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFG 197
F G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 212 FGWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 198 IHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS--FTAETSLGPEF 254
GQLGH+ S++ I P+ + E + + E G +H+ F + F
Sbjct: 268 AGGYGQLGHN----STSHEINPRK----VFELMGSIVTEIACGRQHTSAFVPSSGRIYSF 319
Query: 255 GGGWTGKKG 263
G G G+ G
Sbjct: 320 GLGGNGQLG 328
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 41/128 (32%), Gaps = 53/128 (41%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFH----------------- 73
++ WG N LG + R VP LL SL+ I +C + H
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 74 ------------------------------------SVFVSDDGRVWSCGHGQGGRLGLG 97
S FV GR++S G G G+LG G
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330
Query: 98 SESSVVSP 105
S S+ SP
Sbjct: 331 STSNRKSP 338
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG E K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIECQ----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + S + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 119 QGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IECQKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFH-SVFVSDDGRVWSCGHG 89
V+ +G LG S P + L + + Q+ + H S FV GR++S G G
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLG 322
Query: 90 QGGRLGLGSESSVVSP 105
G+LG GS S+ SP
Sbjct: 323 GNGQLGTGSTSNRKSP 338
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 23 VSSNQFNEVYIWGTNANYNLGT-GSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDG 81
++ N +VY WG +++ LG GS++ VP + SL I QV +HS+ +S
Sbjct: 97 LALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS 156
Query: 82 RVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ--DHSVFLMLSGSVF 139
V+ G + G+LGLG + K+ + + K LG+ ++ HS L LSG++F
Sbjct: 157 EVFCWGQNKYGQLGLGIDCQ----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 212
Query: 140 VCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI 198
G N F QLGL+ V P SL+ SQ ++ +CCG H+ + V+TFG
Sbjct: 213 GWGRNKFGQLGLNDENDRYV---PNLLKSLR-SQKIVYICCGEDHTAALTKEGGVFTFGA 268
Query: 199 HA-GQLGHSPVTVSSASVIEPK 219
GQLGH+ S++ I P+
Sbjct: 269 GGYGQLGHN----STSHEINPR 286
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 20/228 (8%)
Query: 34 WGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQG 91
WG + LG G V P D ++ V H+VFV DDG V++CG
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
G+ LG E S P+++ D + + + H++ L G V+ GL+S QLGL
Sbjct: 64 GQ--LGHEKSRKKPEQV---VALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 152 SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHSPVT 209
I P I SL Q ++ V CG +HS+ S + EV+ +G + GQLG +
Sbjct: 119 QGSEECIRVPRNI--KSLSDIQ-IVQVACGYYHSLALSKASEVFCWGQNKYGQLG---LG 172
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGG 257
+ P++ +++ +P + G HSF S G FG G
Sbjct: 173 IDCQKQTSPQLIKSLL--GIP--FMQVAAGGAHSFVLTLS-GAIFGWG 215
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
++ WG N LG + R VP LL SL+ I +C + H+ ++ +G V++ G G
Sbjct: 211 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LG S S ++P+K+ FE + +A Q S F+ SG ++ GL QLG
Sbjct: 271 YGQLGHNSTSHEINPRKV-FEL-MGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFH-SVFVSDDGRVWSCGHG 89
V+ +G LG S P + L + + QV + H S FV GR++S G G
Sbjct: 263 VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG 322
Query: 90 QGGRLGLGSESSVVSP 105
G+LG GS S+ SP
Sbjct: 323 GNGQLGTGSTSNRKSP 338
>sp|O74881|BTB1_SCHPO BTB/POZ domain-containing protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=btb1 PE=1 SV=1
Length = 1347
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 26/197 (13%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLK-------------RASIKQVCMDKFHSV 75
NE+Y +GTN N LG + + PE + LK R I V KFHSV
Sbjct: 149 NELYGFGTNVNNTLGIANGKEPSSPERVFLLKNQTESPTSGQLFSRDKILDVQASKFHSV 208
Query: 76 FVSDD--GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKL-GVAMASISQDHSVFL 132
++D+ V+ CG G GGR+G ++ + NF + V S+S HS+ L
Sbjct: 209 VLTDEPSQNVYVCGIGAGGRIGFNTDV------QYNFIPIPGIIHKVIQISVSHTHSLAL 262
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPI-PR--SSLKSSQPLIGVCCGRFHSVVYS 189
GS++ G N +LGLS P I PR S+ K Q +IG+ G+ +SV ++
Sbjct: 263 TKFGSIYSWGKNGSGELGLSNDELKKDDPIQITPRRISAFKDYQ-IIGMAAGKSYSVAWT 321
Query: 190 SREVYTFGIHAGQLGHS 206
++Y++G++ GQLG S
Sbjct: 322 DTDIYSWGLNNGQLGIS 338
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 30 EVYIWGTNANYNLG-TGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+++ WG ++ LG ++ + VP L+ L + +I QV +H + ++ DG+ ++ G
Sbjct: 104 QLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGK 163
Query: 89 GQGGRLGLGSE-SSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+LGLG E S SP+++ + + + +A + HS L LSG+VF G+N+
Sbjct: 164 NSHGQLGLGKEFPSQASPQRV---RSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAG 220
Query: 148 QLGLS-----PPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HA 200
QLGLS P H+ L +Q ++ + CG H+ V + S V+TFG
Sbjct: 221 QLGLSDEKDRESPCHV---------KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSC 271
Query: 201 GQLGH 205
GQLGH
Sbjct: 272 GQLGH 276
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 53 PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
P++ + S+K+V HSVF+ +DG V++CG G+LG E + P+++
Sbjct: 25 PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALA 82
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSS 172
D+ + VA + HS+ L G +F G S QLGL + P I + +
Sbjct: 83 DQHIIHVACG---ESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK---LNQ 136
Query: 173 QPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLP 230
Q ++ V CG +H + ++ + +T+G ++ GQLG S AS P+ ++ E +P
Sbjct: 137 QTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP 191
Query: 231 GFIFESNRGTKHSFTAETSLGPEFGGG 257
+ + G HSF S G FG G
Sbjct: 192 --LAQVAAGGAHSFALSLS-GAVFGWG 215
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY G N LG ++ + PE + +L I V + HS+ +SD G+++S G G
Sbjct: 54 EVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAG 111
Query: 90 QGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGL +E SV P+ + + ++ + S H + L G F G NS Q
Sbjct: 112 SDGQLGLMTTEDSVAVPRLI---QKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQ 168
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLGHS 206
LGL SP + SL+ PL V G HS S S V+ +G+ +AGQLG S
Sbjct: 169 LGLGKEFPSQASPQRV--RSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLS 225
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 9/137 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG N LG ++ R+ P + L+ + + + H+ ++ G V++ G G
Sbjct: 211 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS---QDHSVFLMLSGSVFVCGLNSFH 147
G+LG S + V+P+++ + +G + I+ Q F+ SG ++ G +
Sbjct: 271 CGQLGHDSMNDEVNPRRV-----LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 325
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG + ++ P+P+
Sbjct: 326 QLG-TGHTCNVKCPSPV 341
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSL-KRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G + R+ ++ IKQ+ S +++DGR++ G
Sbjct: 108 VYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDN 167
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL + S+V P+++ K V+ S HS F+ G ++V G +L
Sbjct: 168 SEGQIGLKNVSNVCVPQQVTIGKP-----VSWISCGYYHSAFVTTDGELYVFGEPENGKL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ + + +I V CG H+VV + VYTFG+ GQ G +
Sbjct: 223 GL---PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAVYTFGL--GQFGQLGLG 277
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKG 263
EPKV IR+ +I + G H+ + L FG G GK G
Sbjct: 278 TFLFETSEPKVIEN-IRDQTISYI---SCGENHTALITDIGLMYTFGDGRHGKLG 328
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ ++ G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERNTFHVISFFTSEHK--IKQLSAGSNTSAALTEDGRLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL VS +P+ + +P+ + CG +HS V + E+Y FG G+LG
Sbjct: 172 IGLKN-----VSNVCVPQ-QVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLG 223
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ HS V+ + +++ G G+LGLGS+S++ P K L EK V +A+
Sbjct: 42 CGDE-HSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G+V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGL 121
Score = 37.7 bits (86), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSC 86
N VY +G LG G+ +T + P+++++++ +I + + H+ ++D G +++
Sbjct: 261 NAVYTFGLGQFGQLGLGTFLFETSE-PKVIENIRDQTISYISCGENHTALITDIGLMYTF 319
Query: 87 GHGQGGRLGLGSES 100
G G+ G+LGLG E+
Sbjct: 320 GDGRHGKLGLGLEN 333
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 123 SISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGR 182
S +HS + + +++ G N++ QLGL S I PT + +LK + + CGR
Sbjct: 41 SCGDEHSAVVTGNNKLYMFGSNNWGQLGLG-SKSAISKPTCV--KALKPEKVKLAA-CGR 96
Query: 183 FHSVVYSS-REVY-TFGIHAGQLG 204
H++V + VY T G + GQLG
Sbjct: 97 NHTLVSTEGGNVYATGGNNEGQLG 120
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 104/233 (44%), Gaps = 20/233 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG G+ P + +L IKQ+ H + V+ +G V S G
Sbjct: 88 EVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRN 147
Query: 90 QGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
Q G+LGLG +E S+V K FE + + M + +H+ + G ++ G +
Sbjct: 148 QNGQLGLGDTEDSLVPQKIQAFEGIR----IKMVAAGAEHTAAVTEDGDLYGWGWGRYGN 203
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLGHS 206
LGL +V R + + + V CG H++ V S +YT+G GQLGH
Sbjct: 204 LGLGDRTDRLVP----ERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHG 259
Query: 207 PVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFGGGWT 259
+ +I K++A FI + + G +H+ A TS G +G GW
Sbjct: 260 DL---EDHLIPHKLEALS-----NSFISQISGGWRHTM-ALTSDGKLYGWGWN 303
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR 82
+S + +Y +G + LG G + +P L++L + I Q+ H++ ++ DG+
Sbjct: 237 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGK 296
Query: 83 VWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
++ G + G++G+G+ SP ++ F D+ V S H++ + +VF G
Sbjct: 297 LYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWG 353
Query: 143 LNSFHQLGL 151
+ QLG+
Sbjct: 354 RGTNGQLGI 362
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 31/195 (15%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HSV + V S G G+ G+LG G SP +L+ D + + DH+V
Sbjct: 26 HSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA---LDGHQIVSVTCGADHTVAY 82
Query: 133 MLSG-SVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR 191
SG V+ G F +LG TP+P +L + + + CG H + +
Sbjct: 83 SQSGMEVYSWGWGDFGRLGHGNSSDLF---TPLPIKALHGIR-IKQIACGDSHCLAVTME 138
Query: 192 -EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNR------GTKHS 243
EV ++G + GQLG + + S++ K+QA FE R G +H+
Sbjct: 139 GEVQSWGRNQNGQLG---LGDTEDSLVPQKIQA-----------FEGIRIKMVAAGAEHT 184
Query: 244 FTAETSLGPEFGGGW 258
A T G +G GW
Sbjct: 185 -AAVTEDGDLYGWGW 198
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY+WG+N+++ L G+Q+ P+L S A + + ++ + +S DG V +CG G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDA--QTIEAGQYCTFVISTDGSVRACGKG 430
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLGLG ++ + KKL FE + V+ + S H++ G VF G + +L
Sbjct: 431 SYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKL 490
Query: 150 GLSPPPSHIVSPT-PIPRSSLKSSQPLIGVCCG---RFHSVVYSSREVYTFGI-HAGQLG 204
G H S T P+ Q + VC R + V E+YT+G G+LG
Sbjct: 491 G------HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544
Query: 205 H 205
H
Sbjct: 545 H 545
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
E+Y WG LG G +R++P L+ + +++ +V H++ +S DGR VWS G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGG 588
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G G+LG G + V PK + + V S S S+ L +G V+ G +
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQS---SLALTSTGQVYAWGCGAC-- 643
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIHA-GQLGHS 206
LG + + P I ++ ++ V G H + S EVY +G ++ GQ G
Sbjct: 644 LGCGSSEATALRPKLIEE---LAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG 700
Query: 207 PVTVSSASVIEPK 219
S+ + +PK
Sbjct: 701 N---STGPITKPK 710
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG LG G+ + P +++L+ + Q+ HS V+ DG++++ G+G
Sbjct: 4102 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGS-VFVCGLNSFHQ 148
GRLGLG+ S+ P+++ + + + +H++ + GS V+ G + +
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTA---LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4218
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG----------RFHSVVYSSREVYTFG 197
LGL S+ KSS I V CG +F + VYTFG
Sbjct: 4219 LGLG-------------NSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 54/214 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGR-VWSCGH 88
+++ +G LG G+ + +PE + +L+ I QV H++ VS DG VW+ G
Sbjct: 4154 KLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGD 4213
Query: 89 GQGGRLGLGSESSVVSPKKLN-------------------FEKD-------KDKL----- 117
G G+LGLG+ ++ SP+K++ KD +D+L
Sbjct: 4214 GDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPE 4273
Query: 118 ----------------GVAM--ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIV 159
GV + ++ +H++ L +G V+ G NS QLGL +H+
Sbjct: 4274 GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLG-HTNHVR 4332
Query: 160 SPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREV 193
PT + K+ + + GR HS +++ V
Sbjct: 4333 EPTLVTGLQGKNVRQ---ISAGRCHSAAWTAPPV 4363
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+VY+WG + L + VP S +A +QV + + + +G V +CG G
Sbjct: 3998 DVYLWGAGRHGQLAEAGRNVM-VPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
GRLG G+ + ++ + + + S HS+ L SG VF G + +L
Sbjct: 4055 SYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKL 4114
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGIHAGQLGHSPV 208
G P +L+ + ++ + CG HS VV S +++TFG G G +
Sbjct: 4115 GHGNSDRQ---RRPRQIEALQGEE-VVQMSCGFKHSAVVTSDGKLFTFG--NGDYGRLGL 4168
Query: 209 TVSSASVIEPKVQATIIREDLPGF-IFESNRGTKHSF--TAETSLGPEFGGGWTGKKG 263
+S + +V A L G+ I + G H+ +A+ S+ FG G GK G
Sbjct: 4169 GNTSNKKLPERVTA------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRV--WSCGH 88
V+ +G N LG G P+++++L+ I++VC S+ ++ G+V W C
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGC-- 640
Query: 89 GQGGRLGLG-SESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G LG G SE++ + PK + ++ + SI H + L V+ G NS
Sbjct: 641 --GACLGCGSSEATALRPKLI---EELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 148 QLGLSPPPSHIVSPTPI 164
Q G I P +
Sbjct: 696 QCGQGNSTGPITKPKKV 712
Score = 34.7 bits (78), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ V+ + VY +G + L G + + P+ + L I+ V + H++ ++
Sbjct: 4249 QFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALAS 4308
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSP 105
+G V++ G G+LGLG + V P
Sbjct: 4309 NGDVYAWGSNSEGQLGLGHTNHVREP 4334
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 31 VYIWGTNANYNLGTGSQQ-TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++ WG N+ LG G ++ +L D K IK++ HS V+D+G ++ CG
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCGLN 76
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFH 147
+ G+LGLG V L F K LG A+ ++ D ++ L +G V CG NSF
Sbjct: 77 KDGQLGLGHTEEV-----LYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFG 131
Query: 148 QLGLSPPPSHIVSPTPI 164
QLG+ P V P I
Sbjct: 132 QLGVPHGPRRCVIPQAI 148
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + +A+ ++H++ L
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHE---AIVLAACGRNHTLAL 215
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 216 TDTGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMLMDCKG 271
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 272 NLYSFGCPEYGQLGHN 287
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L+++L +I + H++ ++D G V++ G
Sbjct: 168 KLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGEN 227
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 228 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMLMDCKGNLYSFGCPEYGQ 283
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 284 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 343
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 344 DSQKRVFSWGFGGYGRLGHA 363
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G++G GS ++ P+++ ++K + +A + S+ ++ +G V+V G N
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMC---SMAVVDTGEVYVWGYNGNG 235
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
QLGL + PTP ++L+ + + V CG H++V + ++Y +G ++ GQLG
Sbjct: 236 QLGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGT 291
Query: 206 ---------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 292 GNKSNQSYPTPVVVEKDRIIE 312
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+E+++ GTN + LG G Q+ P LDSL I + H V + DG V++ G
Sbjct: 65 DEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWG 124
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + + P ++ +K + VA S HS+ L G VF G N+
Sbjct: 125 HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYNNS 181
Query: 147 HQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
Q+G S + PIPR + ++ ++ + CG+ S+ V + EVY +G + GQ
Sbjct: 182 GQVG-----SGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQ 236
Query: 203 LG 204
LG
Sbjct: 237 LG 238
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 20/151 (13%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LG+G S + P++L+ G
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLD-----SLTG 97
Query: 119 VAMASISQD---HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPL 175
+AS+S H V G VF G N++ QLG + +H + P I S+ S++ +
Sbjct: 98 KKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQV 154
Query: 176 IGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
I V CG +HS+V +S EV+ +G ++GQ+G
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVG 185
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLN-FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G++G GS ++ P+++ ++K + +A + S+ ++ +G V+V G N
Sbjct: 179 NNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMC---SMAVVDTGEVYVWGYNGNG 235
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH 205
QLGL + PTP ++L+ + + V CG H++V + ++Y +G ++ GQLG
Sbjct: 236 QLGLGSSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGT 291
Query: 206 ---------SPVTVSSASVIE 217
+PV V +IE
Sbjct: 292 GNKSNQSYPTPVVVEKDRIIE 312
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+E+++ GTN + LG G Q+ P LDSL I + H V + DG V++ G
Sbjct: 65 DEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWG 124
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + + P ++ +K + VA S HS+ L G VF G N+
Sbjct: 125 HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYNNS 181
Query: 147 HQLGLSPPPSHIVSPTPIPR--SSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
Q+G S + PIPR + ++ ++ + CG+ S+ V + EVY +G + GQ
Sbjct: 182 GQVG-----SGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQ 236
Query: 203 LG 204
LG
Sbjct: 237 LG 238
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 13/135 (9%)
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQD---HSVF 131
++ + + ++ G G LG+G S + P++L+ G +AS+S H V
Sbjct: 59 LYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLD-----SLTGKKIASLSYGSGPHIVL 113
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR 191
G VF G N++ QLG + +H + P I S+ S++ +I V CG +HS+V +S
Sbjct: 114 ATTDGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEVACGSYHSLVLTSD 170
Query: 192 -EVYTFGI-HAGQLG 204
EV+ +G ++GQ+G
Sbjct: 171 GEVFAWGYNNSGQVG 185
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 293 NKSNQSYPTPVTVEKDRIIE 312
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATTEGEVFT 122
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 179
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQ
Sbjct: 180 NSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 203 LG 204
LG
Sbjct: 237 LG 238
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI-- 100
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 101 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 157
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 18/200 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
EV+ WG NA LG G+ VP + +L + +V +HS+ ++ DG V++ G+
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS + P+++ ++K+ V +A Q + ++ +G V+V G N Q
Sbjct: 179 NNSGQVGSGSTVNQPIPRRVT-GCLQNKVVVTIAC-GQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLGH- 205
LGL + PTP ++L+ + + V CG H++V + +VY +G ++ GQLG
Sbjct: 237 LGLGNSGNQ---PTPCRVAALQGIR-VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 206 --------SPVTVSSASVIE 217
+PVTV +IE
Sbjct: 293 NKSNQSYPTPVTVEKDRIIE 312
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF---HSVFVSDDGRVWS 85
+E+++ GTN LG G Q+ P LDSL I C+ H V + +G V++
Sbjct: 65 DEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI--ACLSYGSGPHIVLATTEGEVFT 122
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
GH +LG G+ + + P ++ +K + VA S HS+ L G VF G N
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSY---HSLVLTSDGEVFAWGYN 179
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQ 202
+ Q+G S + P P + ++ ++ + CG+ + V + EVY +G + GQ
Sbjct: 180 NSGQVG---SGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 203 LG 204
LG
Sbjct: 237 LG 238
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 19/173 (10%)
Query: 64 IKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG 118
I+Q C+ F S ++ + + ++ G G LGLG S + P++L+ K
Sbjct: 45 IRQACV--FGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI-- 100
Query: 119 VAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGV 178
++ S H V G VF G N++ QLG + +H + P I S+ S++ +I V
Sbjct: 101 ACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NGTTNHGLVPCHI--STNLSNKQVIEV 157
Query: 179 CCGRFHSVVYSSR-EVYTFGI-HAGQLG-----HSPVTVSSASVIEPKVQATI 224
CG +HS+V +S EV+ +G ++GQ+G + P+ ++ KV TI
Sbjct: 158 ACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTI 210
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ T P + +LK +K + H++ ++ G+V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++F + K + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTEERSTFHLISFFTSQRK--IKQLSAGSNTSAALTEDGELFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL V+ +P+ + +P+ + CG +HS V + ++YTFG G+LG
Sbjct: 172 IGL-----ENVTNVCVPQ-QVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLG 223
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 24/204 (11%)
Query: 10 RPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCM 69
R I L + + E+++WG N+ +G + VP+ + K I +
Sbjct: 140 RKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGK--PISWISC 197
Query: 70 DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKL--NFEKDKDKLG----VAMAS 123
+HS FV+ +G++++ G + G+LGL P +L N + G V +
Sbjct: 198 GYYHSAFVTTEGQLYTFGEPECGKLGL--------PNQLLVNHRMPQPVPGIPGKVVQVA 249
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS-SLKSSQPLIGVCCGR 182
H+V L +V+ GL F QLGL + T +P++ Q + + CG
Sbjct: 250 CGGGHTVVLT-EKAVYTFGLGQFGQLGLGT----FLFETSVPKAIEHIKDQKISFIACGE 304
Query: 183 FHSVVYSSREV-YTFGI-HAGQLG 204
H+ + + + YTFG G+LG
Sbjct: 305 NHTALITDMGLMYTFGDGRHGKLG 328
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+S+V P K L EK V A+
Sbjct: 42 CGDE-HTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEK------VKFAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ G V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGL 121
Score = 38.1 bits (87), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 31 VYIWGTNANYNLGTGSQQ-TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY +G LG G+ VP+ ++ +K I + + H+ ++D G +++ G G
Sbjct: 263 VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDG 322
Query: 90 QGGRLGLGSESSV 102
+ G+LGLG E+S
Sbjct: 323 RHGKLGLGLENST 335
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G + G+LG G V +P+ + + + A+ ++H++ L
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV---IVSAACGRNHTLAL 217
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSVF G N QLGL + SP I + + QP+ + CG S++ +
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI----MYNGQPITKMACGAEFSMIMDCKG 273
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 274 NLYSFGCPEYGQLGHN 289
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P L++ L I + H++ +++ G V++ G
Sbjct: 170 KLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGEN 229
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 230 KMGQLGLGNQTDAVPSPAQIMYNGQP----ITKMACGAEFSMIMDCKGNLYSFGCPEYGQ 285
Query: 149 LGLSPPPSHIVSPTPI-------PR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I I PR K Q L V CG H++V
Sbjct: 286 LGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVL 345
Query: 189 -SSREVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 346 DSQKRVFSWGFGGYGRLGHA 365
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 12/191 (6%)
Query: 18 DRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVF 76
+ I V+ N +EV+++G N + LGTG Q+ VP+ L++L IK + H +
Sbjct: 32 NEAIYVTDN--DEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLL 89
Query: 77 VSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLS 135
++DG V++ GH +LG G+ + ++P ++ K + VA S HS+ L
Sbjct: 90 TTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGS---HHSMALAAD 146
Query: 136 GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVY 194
G +F G N+ Q+G + PTP ++ ++ ++ + CG+ S+ V S EVY
Sbjct: 147 GELFAWGYNNCGQVGSGSTANQ---PTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY 203
Query: 195 TFGIHA-GQLG 204
+G + GQLG
Sbjct: 204 GWGYNGNGQLG 214
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG GS+++++SP ++ EK++
Sbjct: 261 TYGQLGTGSKNNLLSPTQIMVEKER 285
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E++ WG N +G+GS + P ++ + L + + + S+ V D G V+ G+
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG+ + ++P ++ + V H++ L G ++ G N++ Q
Sbjct: 208 NGNGQLGLGNNGNQLTPVRV---AALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264
Query: 149 LGLSPPPSHIVSPTPI 164
LG + ++++SPT I
Sbjct: 265 LG-TGSKNNLLSPTQI 279
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + SI++ C+ +++V+D+ V+ G LG G S + PKKL E
Sbjct: 12 LLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKL--E 69
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
K +++ S H + G V+ G N + QLG + + ++P + + L
Sbjct: 70 ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLG-NGTTNQGIAPVQVCTNLL-- 126
Query: 172 SQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
+ +I V CG HS+ ++ E++ +G + GQ+G
Sbjct: 127 IKQVIEVACGSHHSMALAADGELFAWGYNNCGQVG 161
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 15/139 (10%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLG---VAMASISQDHS 129
HS+ ++ +G++WS G G+LG G + +PK + + LG + A+ ++H+
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLI------EGLGEEVIVAAACGRNHT 187
Query: 130 VFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVY 188
+ L +G+V+ G N QLG ++SP I + QP++ V CG F +V
Sbjct: 188 LALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQY----NGQPIVKVACGAEFSMIVD 243
Query: 189 SSREVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 244 CKGNLYSFGCPEYGQLGHN 262
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + + P+L++ L I + H++ ++++G V++ G
Sbjct: 143 KLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGEN 202
Query: 90 QGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LG G+++ +V+SP + + + + + S+ + G+++ G + Q
Sbjct: 203 KLGQLGQGNQTDAVLSPATIQYNGQP----IVKVACGAEFSMIVDCKGNLYSFGCPEYGQ 258
Query: 149 LGLSPPPSHIVSPTP-------IPR------SSLKSSQPLI-------GVCCGRFHSVVY 188
LG + I IPR K Q L V CG H++V
Sbjct: 259 LGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVL 318
Query: 189 SS-REVYTFGIHA-GQLGHS 206
S + V+++G G+LGH+
Sbjct: 319 DSQKRVFSWGFGGYGRLGHA 338
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 16/235 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRA-SIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY G N LG G RD + A +IKQ+ S +++DG+++ G
Sbjct: 108 VYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDN 167
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
G++GL +S+V P ++ K ++ S HS F+ + G ++ G +L
Sbjct: 168 SEGQIGLEDKSNVCIPHEVTVGK-----PISWISCGYYHSAFVTMDGELYTFGEPENGKL 222
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQLGHSPVT 209
GL P+ ++ P+ L + +I V CG H+VV + + VY FG+ GQ G +
Sbjct: 223 GL---PNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEKVVYAFGL--GQFGQLGLG 277
Query: 210 VSSASVIEPKVQATIIREDLPGFIFESNRGTKHS-FTAETSLGPEFGGGWTGKKG 263
EPK+ I + I + G H+ E L FG G GK G
Sbjct: 278 TFLFETSEPKIIERIKDQK----ICHISCGENHTALMTELGLLYTFGDGRHGKLG 328
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 10/178 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
N++Y++G+N LG GS+ P + +LK +K + H++ +D G V++ G
Sbjct: 54 NKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGG 113
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G+LGLG + ++ F D + S + S L G +F+ G NS Q
Sbjct: 114 NNEGQLGLGDTDDRDTFHQIVFFTPADT--IKQLSAGANTSAALTEDGKLFMWGDNSEGQ 171
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGI-HAGQLG 204
+GL S++ P + +P+ + CG +HS V E+YTFG G+LG
Sbjct: 172 IGLE-DKSNVCIPHEV-----TVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLG 223
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 68 CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSP---KKLNFEKDKDKLGVAMASI 124
C D+ H+ V+ + +++ G G+LGLGS+++++ P K L EK V +A+
Sbjct: 42 CGDE-HTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK------VKLAAC 94
Query: 125 SQDHSVFLMLSGSVFVCGLNSFHQLGL 151
++H++ +G V+ G N+ QLGL
Sbjct: 95 GRNHTLVSTDTGGVYAAGGNNEGQLGL 121
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 31 VYIWGTNANYNLGTGSQ--QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
VY +G LG G+ +T + P++++ +K I + + H+ +++ G +++ G
Sbjct: 263 VYAFGLGQFGQLGLGTFLFETSE-PKIIERIKDQKICHISCGENHTALMTELGLLYTFGD 321
Query: 89 GQGGRLGLGSES 100
G+ G+LGLG E+
Sbjct: 322 GRHGKLGLGMEN 333
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS+ ++ +G++WS G G+LG G + PK + E K ++ V A+ ++H++ L
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLI--ESLKGEVFV-HAACGRNHTLAL 208
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR- 191
+GSV+ G N QLGL + SP I L + QP+ V CG S++ +
Sbjct: 209 TENGSVYAFGENKMGQLGLGNKTDAVPSPAQI----LYNGQPITKVACGAEFSMIMDCKG 264
Query: 192 EVYTFGI-HAGQLGHS 206
+Y+FG GQLGH+
Sbjct: 265 NLYSFGCPEYGQLGHN 280
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 27/200 (13%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+++ WG N LG G + DVP+L++SLK + H++ ++++G V++ G
Sbjct: 161 KLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALTENGSVYAFGEN 220
Query: 90 QGGRLGLGSESSVV-SPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG+++ V SP ++ + + + + S+ + G+++ G + Q
Sbjct: 221 KMGQLGLGNKTDAVPSPAQILYNGQP----ITKVACGAEFSMIMDCKGNLYSFGCPEYGQ 276
Query: 149 LGLSPPPSHIVSPTPIPR-------------SSLKSSQPL-------IGVCCGRFHSVVY 188
LG + +I I K Q L + CG HS++
Sbjct: 277 LGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLIL 336
Query: 189 SS-REVYTFGIHA-GQLGHS 206
S + V+++G G+LGHS
Sbjct: 337 DSQKRVFSWGFGGYGRLGHS 356
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 16/188 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDV--PELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
++Y +G++ LG +V P L+D + QV H + ++ V+S G
Sbjct: 428 QLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWG 487
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G+ GRLGL SE V SP+K+ ++ L + D S L L+G V CGLN +
Sbjct: 488 CGEYGRLGLDSEDDVYSPQKVEVQRG---LCIVNVCCGSDGSFLLTLTGKVLACGLNEHN 544
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLI---------GVCCGRFHSVVYSSR-EVYTFG 197
+LGL+ + I++ +S L + GR H+ R + TFG
Sbjct: 545 KLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFG 604
Query: 198 IH-AGQLG 204
+ GQLG
Sbjct: 605 SNKCGQLG 612
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 31/215 (14%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK 60
+++++ +P + + I V +++ +EVY+WG G + T P+ LD K
Sbjct: 301 VSMLNRSNKKPRTGTVTEAPIAVVTSRSSEVYVWG---------GGKTT---PQKLDVFK 348
Query: 61 ---RASIKQVCMDKFHSVFVSDDGRVWSCGHGQG-----GRLGLGSESSVVSPKKLNFEK 112
RA +QVC H V+ + +++ + QG G+LG G +S PK + EK
Sbjct: 349 GGWRA--RQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHV--EK 404
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPP-SHIVSPTPIPRSSLKS 171
+ K V S D +V + G ++ G + + LG++ S ++ P +
Sbjct: 405 LQGK-SVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLV---DFFL 460
Query: 172 SQPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
++P+ V CG H + + S+ VY++G G+LG
Sbjct: 461 NEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLG 495
Score = 34.7 bits (78), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 22/144 (15%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
VY WG LG S+ P+ ++ + I VC S ++ G+V +CG +
Sbjct: 483 VYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNE 542
Query: 91 GGRLGLGS----------------ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLML 134
+LGL +S+ K+L+F K + S + H+ +
Sbjct: 543 HNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYK------IRSISPGRTHTAAIDE 596
Query: 135 SGSVFVCGLNSFHQLGLSPPPSHI 158
G + G N QLG+ H+
Sbjct: 597 RGRLLTFGSNKCGQLGVGDYRKHL 620
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 23/190 (12%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+ +G+ +N LG GS P ++++L + QV H + +S + +++ G G
Sbjct: 412 IMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGD 471
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLGLG+ S P+++ ++ V D S+ L + G CG N F++LG
Sbjct: 472 SGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGI---DSSMILTVPGQALACGSNRFNKLG 528
Query: 151 LSPPPSHI-VSPTPIPRSSLKSS-------------QPLIGVCCGRFHS-VVYSSREVYT 195
L H+ + P+P ++ + +PL+ + G HS V +S + YT
Sbjct: 529 L----DHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYT 584
Query: 196 FGIHA-GQLG 204
FG + GQLG
Sbjct: 585 FGSNQHGQLG 594
Score = 37.7 bits (86), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 15/187 (8%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E++ WG + LG G++++ P+ + ++V S+ ++ G+ +CG
Sbjct: 463 ELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSN 522
Query: 90 QGGRLGLGSESSVVSP-------KKLNF----EKDKDKLGVAMASISQDHSVFLMLSGSV 138
+ +LGL S P + L+F D+ + + HS + SG
Sbjct: 523 RFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDC 582
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI 198
+ G N QLG + + S P L+ + + C F + + EVY++G
Sbjct: 583 YTFGSNQHGQLGTN---TRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWGK 639
Query: 199 HA-GQLG 204
A G+LG
Sbjct: 640 GARGRLG 646
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGH 88
+ Y +G+N + LGT +++ P + L+ + V C D F +V + + V+S G
Sbjct: 581 DCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAF-TVAIGAESEVYSWGK 639
Query: 89 GQGGRLGLGSESS 101
G GRLG E +
Sbjct: 640 GARGRLGRRDEDA 652
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 10/180 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF-HSVFVSDDGRVWSCG 87
+EV+++G N + LGTG Q+ VP+ L+ L IK + H + ++DG V++ G
Sbjct: 41 DEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWG 100
Query: 88 HGQGGRLGLGSESSVVSPKKLNFE-KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
H +LG G+ + ++P ++ K + VA S HS+ L G VF G N+
Sbjct: 101 HNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGS---HHSMALAADGEVFAWGYNNC 157
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSV-VYSSREVYTFGIHA-GQLG 204
Q+G + PTP ++ + ++G+ CG+ S+ V + EVY +G + GQLG
Sbjct: 158 GQVGSGSTANQ---PTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLG 214
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP-ELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
VY WG N LG G+ P ++ +L + +V HS+ ++ DG V++ G+
Sbjct: 96 VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155
Query: 90 QGGRLGLGSESSVVSPKKL-NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
G++G GS ++ +P+K+ N K +G+A Q S+ ++ +G V+ G N Q
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACG---QTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE-VYTFGIHA-GQLG 204
LGL + + TP+ ++L S + + CG H++ + +Y +G + GQLG
Sbjct: 213 LGLGNNGNQL---TPVRVAALHSV-CVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG N N LG G+ + P + +L + Q+ H++ ++D+G +++ G
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGAN 260
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDK 114
G+LG G++++++SP + EK++
Sbjct: 261 TYGQLGTGNKNNLLSPAHIMVEKER 285
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 55 LLDSLKRASIKQVCM---DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
LL + ASI++ C+ +++V+D+ V+ G LG G S + PKKL
Sbjct: 12 LLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKL--- 68
Query: 112 KDKDKLGVAMASISQDHSVFLMLS---GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
+ G + S+S ++LS G V+ G N + QLG + + ++P + +
Sbjct: 69 --EGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTTNQGIAPVQVCTNL 125
Query: 169 LKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLG 204
L + ++ V CG HS+ ++ EV+ +G + GQ+G
Sbjct: 126 L--IKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVG 161
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V +WG N LG VP ++ R + VS DG+V++CG G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GRLGLG +V P +L + VA+ S + H++ L L G VF G +LG
Sbjct: 3048 NGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGK-HALALTLDGKVFSWGEGEDGKLG 3106
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGI-HAGQLGHSPV 208
+ P +L++ + + V CG HS SS+ E+YT+G+ G+LGH
Sbjct: 3107 HG---NRTTLDKPRLVEALRAKK-IRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3162
Query: 209 TVSSASVIEPKV 220
T ++PK+
Sbjct: 3163 TTQ----LKPKL 3170
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 107/273 (39%), Gaps = 65/273 (23%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG + LG G++ + D P+L++ L S+ + HS ++ G V + G G
Sbjct: 4156 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4215
Query: 90 QGGRLGLGSESSVVSPKKLNF-------------------------------EKDKDKL- 117
+ GRLG G + PK + + D KL
Sbjct: 4216 RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4275
Query: 118 -------------------GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHI 158
GV SV L SG+V+ G FH+LG H+
Sbjct: 4276 RGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHG-SVDHV 4334
Query: 159 VSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS-SREVYTFGIH-AGQLGHSPVTVSSASVI 216
P + ++L+ + +I + G H V S S EVYT+G + GQLG VT ++
Sbjct: 4335 RRPKKV--AALQGKK-IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVT----AIQ 4387
Query: 217 EPKVQATIIREDLPGFIFESNRGTKHSFTAETS 249
P++ A + + I + G+ H+ TS
Sbjct: 4388 RPRLVAALQGK----HIVKVTCGSAHTLALSTS 4416
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V+ WG + LG G++ T D P L+++L+ I+ V HS +S G +++ G G
Sbjct: 3093 KVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLG 3152
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ GRLG G ++ + PK + + + VA S ++ L G+VF G F +L
Sbjct: 3153 EYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGS-RDAQTLALTEDGAVFSWGDGDFGKL 3211
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGV----CCGRFHSVVYSSREVYTFG 197
G S TP L IGV C +F + + EV+T+G
Sbjct: 3212 GRGGSEG---SDTPHEIERLSG----IGVVQIECGAQFSLALTRAGEVWTWG 3256
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 9 MRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVC 68
+RPI H+ K +Q +VY G N LG G +P L L++ +K+V
Sbjct: 3019 LRPI-HIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVA 3077
Query: 69 MDK--FHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQ 126
+ H++ ++ DG+V+S G G+ G+LG G+ +++ P+ + + K VA S
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGS--- 3134
Query: 127 DHSVFLMLSGSVFVCGLNSFHQLG 150
HS + G ++ GL + +LG
Sbjct: 3135 SHSAAISSQGELYTWGLGEYGRLG 3158
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 6 NEEMRP--IDHLIRDRKIDVSS----------NQFNEVYIWGTNANYNLGTGSQQTRDVP 53
+++RP ++ L+ R ID++ + V+ WG LG G +P
Sbjct: 4226 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4285
Query: 54 ELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEK 112
++SL + +V C +F SV ++ G V++ G G RLG GS V PKK+ +
Sbjct: 4286 YKIESLAGLGVVKVECGSQF-SVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQ 4344
Query: 113 DKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR--SSLK 170
K + +A S+ H V SG V+ G N QLG V+ PR ++L+
Sbjct: 4345 GKKIISIATGSL---HCVACSDSGEVYTWGDNDEGQLG-----DGTVTAIQRPRLVAALQ 4396
Query: 171 SSQPLIGVCCGRFHSVVYSSREV 193
++ V CG H++ S+ ++
Sbjct: 4397 GKH-IVKVTCGSAHTLALSTSQL 4418
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDD 80
+ + SN + Y WGT ++ LG G R VP + +L++ ++ V +S ++
Sbjct: 629 LAIDSN--HNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 686
Query: 81 GRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFV 140
G + + G G RLG G+ P + D + VA+ S HS+ L G VF
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS-GDAHSLALTSEGLVFA 745
Query: 141 CGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH 199
G + +LG + PI SL Q V G SV SS ++YT+G
Sbjct: 746 WGDGDYGKLGNGNCNGSL---QPILVESLPRVQ---RVFAGSQFSVALSSEGQLYTWG-K 798
Query: 200 AGQLGHSPVTVSSASVIEPKVQATI 224
A LGH V S P++ +++
Sbjct: 799 ATCLGHQLVERSVQGCSVPRLVSSL 823
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
V+ WG LG G + D P ++ L + Q+ C +F S+ ++ G VW+ G G
Sbjct: 3200 VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQF-SLALTRAGEVWTWGKG 3258
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
RLG G + V P+ + + + + VA+ ++ H + + +G V+ G N Q
Sbjct: 3259 DYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGAL---HCLAVTDAGQVYAWGDNDHGQQ 3315
Query: 150 G 150
G
Sbjct: 3316 G 3316
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ ++ + EV+ WG Y LG G Q P+ + L+ + V + H + V+D
Sbjct: 3241 QFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTD 3300
Query: 80 DGRVWSCG---HGQGG 92
G+V++ G HGQ G
Sbjct: 3301 AGQVYAWGDNDHGQQG 3316
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELL-DSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
++ WG N+ LG G ++ +P+ L D + IK V HS V+D G ++ CG
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLN 76
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ G+LGLG V+ + K + + D ++ L G V CG N+F QL
Sbjct: 77 KDGQLGLGHTEEVL---RFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133
Query: 150 GLSPPPSHIVSPTPI 164
G+ P V P I
Sbjct: 134 GVPHGPRKCVVPQAI 148
Score = 35.8 bits (81), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Query: 92 GRLGLGSESSVVSPKKLNFEKDKDKLG-VAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
G+LGLG + V P++L+ D + G + + HS + G +FVCGLN QLG
Sbjct: 26 GQLGLGHKEDVFLPQQLS---DFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLG 82
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIHA-GQLG--HS 206
L H P+ V CG +++ + + +V + G +A GQLG H
Sbjct: 83 L----GHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHG 138
Query: 207 PVTVSSASVIE 217
P IE
Sbjct: 139 PRKCVVPQAIE 149
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 20/201 (9%)
Query: 30 EVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
E++ WG N + LG G + + P++++ L + Q+ + HS+ +S G ++S G
Sbjct: 158 ELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGK 217
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQ 148
+ G+LGLG S P + + D V + HS L G +F G Q
Sbjct: 218 NECGQLGLGHTESKDDPSLI---EGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQ 274
Query: 149 LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR--EVYTFGI-HAGQLGH 205
LG + + + + +Q + CGR+H++ Y S +V++FG GQLG+
Sbjct: 275 LGHNSTQNELRPCLVAELVGYRVTQ----IACGRWHTLAYVSDLGKVFSFGSGKDGQLGN 330
Query: 206 S---------PVTVSSASVIE 217
PV VSS+ ++
Sbjct: 331 GGTRDQLMPLPVKVSSSEELK 351
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 15/172 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG N LG G +++D P L++ L ++ V HS ++ DG +++ G G+
Sbjct: 212 IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGK 271
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSV-FLMLSGSVFVCGLNSFH 147
G+LG S + + P + + +G + I+ + H++ ++ G VF G
Sbjct: 272 HGQLGHNSTQNELRPCLV-----AELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDG 326
Query: 148 QLG-------LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE 192
QLG L P P + S + S S + LI + G +++ +E
Sbjct: 327 QLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWIKKE 378
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 33/192 (17%)
Query: 63 SIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLG--SESSVVSPKKLNFEKDKDKLGVA 120
+I+++ +FHS F+ DG +W+ G G G+LG G + S+ + P ++N K V
Sbjct: 828 AIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICK----VT 883
Query: 121 MASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCC 180
+ + H+V L +G V VCG S+ Q+G+ + + TP+P L+ + +
Sbjct: 884 QIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR----VRDIAT 939
Query: 181 GRFHSV-VYSSREVYTFG---------------IHAGQLGH-------SPVTVSSASVIE 217
+HS+ + V+ +G I + QL + SP T S +
Sbjct: 940 HYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVN 999
Query: 218 PKVQATIIREDL 229
+ A I REDL
Sbjct: 1000 LNLPAEIPREDL 1011
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 50 RDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLN 109
R+V LD +I V HS ++ +G +++ G G +LG G+++ + P ++
Sbjct: 1014 REVKHFLD----GNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQV- 1068
Query: 110 FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL 151
FE + K S+ +H++ GSVF G N F Q G+
Sbjct: 1069 FEPNGAKW--VNVSLGNNHTIASTDDGSVFAWGKNDFGQCGV 1108
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+Y WG +Y LG G++ R P + A V + H++ +DDG V++ G
Sbjct: 1043 LYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKND 1102
Query: 91 GGRLGL 96
G+ G+
Sbjct: 1103 FGQCGV 1108
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
H + +S G++ + G + G+ G+G + + ++ D D + + Q HS F+
Sbjct: 787 HILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQV----DGDWPAIEKIACGQFHSAFI 842
Query: 133 MLSGSVFVCGLNSFHQLGL-SPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS 189
GS++ G + QLG S+ + PT + K +Q + CGR H+VV +
Sbjct: 843 CSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQ----IACGRAHTVVLT 896
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 18/230 (7%)
Query: 5 DNEEMR----PIDHLIRDRK--IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDS 58
DNEE LIR + ++ ++ +V++WG N LG VP ++
Sbjct: 2930 DNEEEEDDKGSTGSLIRKKTPGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSET 2989
Query: 59 LKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVS-PKKLNFEKDKDKL 117
L ++ QV V+ +G+V+SCG GRLGLG S V P+++
Sbjct: 2990 LSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVK 3049
Query: 118 GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIG 177
VA+ S + H+ L + G VF G +LG S + P +LK+ + +
Sbjct: 3050 KVAVHSGGR-HATALTVDGKVFSWGEGDDGKLGHF---SRMNCDKPRLIEALKTKR-IRD 3104
Query: 178 VCCGRFHS-VVYSSREVYTFGI-HAGQLGHSPVTVSSASVIEPKVQATII 225
+ CG HS + SS E+YT+G+ G+LGH T ++PK+ ++
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ----LKPKMVKVLL 3150
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 17/174 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGH 88
+V+ WG LG G P+L++ L+ + +V C +F S+ ++ DG+V+S G
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF-SIALTKDGQVYSWGK 684
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS--- 145
G RLG G+E V PK L + K + VA S H + L V G N
Sbjct: 685 GDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGST---HCLALTEDSEVHSWGSNDQCQ 741
Query: 146 -FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI 198
F L ++ P PT +P S+ ++G+ CG S +SS ++ G+
Sbjct: 742 HFDTLRVTKP-----EPTALPG---LDSKHIVGIACGPAQSFAWSSCSEWSIGL 787
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
V+ WG LG G + ++P+ ++ L + Q+ S+ ++ G VW+ G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 3234
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
RLG GS+ V P+ + + K + VA+ ++ H + + SG V+ G N Q G
Sbjct: 3235 YFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGAL---HCLAVTDSGQVYAWGDNDHGQQG 3291
Query: 151 LSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIH 199
+ V+ P L+ Q + V CG HSV +++ +V T +H
Sbjct: 3292 NG---TTTVNRKPTLVQGLE-GQKITRVACGSSHSVAWTTVDVATPSVH 3336
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD--KFHSVFVSDDGRVWSCG 87
E+Y WG LG GS + +P L+ LK + V ++ V+++G+VWS G
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G G+LG G +PK + +D D + V S S+ L G V+ G
Sbjct: 632 DGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGS---QFSIALTKDGQVYSWGKGDNQ 688
Query: 148 QLG 150
+LG
Sbjct: 689 RLG 691
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V+ WG + LG S+ D P L+++LK I+ + HS ++ G +++ G G
Sbjct: 3068 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLG 3127
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ GRLG G ++ + PK + + VA S ++ L G VF G F +L
Sbjct: 3128 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDEGLVFSWGDGDFGKL 3186
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSREVYTFGI-HAGQLGH-S 206
G + P I R + Q + + CG +F + S V+T+G +LGH S
Sbjct: 3187 GRGGSEGCNI-PQNIER---LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242
Query: 207 PVTVSSASVIE 217
V V V+E
Sbjct: 3243 DVHVRKPQVVE 3253
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 29/238 (12%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCG 87
+ V+ WG LG G VP +DSL + +V C +F SV ++ G V++ G
Sbjct: 4166 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF-SVALTKSGAVYTWG 4224
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G RLG GS+ V P+++ + K + +A S+ H V G V+ G N
Sbjct: 4225 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSL---HCVCCTEDGEVYTWGDNDEG 4281
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSS---QPLIGVCCGRFHSVVYSSREVYTFG------- 197
QLG + I R L ++ + + V CG H++ +S+ + + G
Sbjct: 4282 QLGDG-------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVP 4334
Query: 198 IHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFG 255
+ L P+ ++ + + +P F E + ET LGP G
Sbjct: 4335 MEYNHLQEIPIIALRNRLLLLHHISELFCPCIPMFDLEGS-------LDETGLGPSVG 4385
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 85/228 (37%), Gaps = 57/228 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG + LG G++ D P +++SL+ + V HS V+ G +++ G G
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120
Query: 90 QGGRLGLGSESSVVSPKKLNF-------------------------------EKDKDKL- 117
+ GRLG + PK + + D KL
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4180
Query: 118 -------------------GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHI 158
GV SV L SG+V+ G +H+LG H+
Sbjct: 4181 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG-SDDHV 4239
Query: 159 VSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
P + L+ + +I + G H V + EVYT+G + GQLG
Sbjct: 4240 RRPRQV--QGLQGKK-VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4284
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ V+ + VY WG + LG GS P + L+ + + H V ++
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE 4268
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPK 106
DG V++ G G+LG G+ +++ P+
Sbjct: 4269 DGEVYTWGDNDEGQLGDGTTNAIQRPR 4295
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 52 VPELLDSLKRASIKQVCM--DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLN 109
P+L+ L +I ++ D H + ++ G V+S G G GGRLG G + PK ++
Sbjct: 484 APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVIS 543
Query: 110 -FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
F + V + +S + G ++ G ++ +LG + P+ +
Sbjct: 544 AFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI---PMLVAG 600
Query: 169 LKSSQPLIGVCCGRFHS---VVYSSREVYTFG 197
LK + +I V CG + V + +V+++G
Sbjct: 601 LKGLK-VIDVACGSGDAQTLAVTENGQVWSWG 631
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 9/181 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSL--KRAS--IKQVCMDKFHSVFVSDDGRVWS 85
EVY WG LG G + P+++ + K+A + + +S ++ +G +++
Sbjct: 516 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYT 575
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G G GRLG GS P + K + VA S ++ + +G V+ G
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS-GDAQTLAVTENGQVWSWGDGD 634
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQ-LG 204
+ +LG TP L+ + C +F + +VY++G Q LG
Sbjct: 635 YGKLGRGGSDG---CKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 691
Query: 205 H 205
H
Sbjct: 692 H 692
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ ++ + +VY WG N LG G+++ P+LL+ L+ + V H + +++
Sbjct: 668 QFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Query: 80 DGRVWSCG 87
D V S G
Sbjct: 728 DSEVHSWG 735
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSV 75
V + EVY WG N LG G+ P L+ +L+ + +V H++
Sbjct: 4264 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 53 PELLDSLK-----RASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKK 107
PE+L+ ++ ++QV H V ++ + V+S G G+ GRLGL SE +P+K
Sbjct: 466 PEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQK 525
Query: 108 LNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVS-----PT 162
++ K L + D + L SG V CGLN F++LGL+ S I++
Sbjct: 526 VDVPK---ALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEV 582
Query: 163 PIPRSSLKSSQ----PLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
P S + Q + + G+ H+ R + TFG + GQLG
Sbjct: 583 PYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK 60
+T+++ RP + + I V +++ +EVY+WG + P+ LD +K
Sbjct: 319 VTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG------------KSTPQKLDVIK 366
Query: 61 R-ASIKQVCMDKFHSVFVSDDGRVWSCGHGQG-----GRLGLGSESSVVSPKKLNFEKDK 114
S +QVC H V+ + +++ + QG G+LG G ++S PK + EK +
Sbjct: 367 SGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK--HVEKLQ 424
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLK--SS 172
K + S D +V + G ++ G + + +G+ + P + L S
Sbjct: 425 GK-AIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV----DKVAGPEVLEPMQLNFFLS 479
Query: 173 QPLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
P+ V CG H VV + ++EVY++G G+LG
Sbjct: 480 NPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLG 513
Score = 34.7 bits (78), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 22/138 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG S++ P+ +D K I V + ++ G+V +CG
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLN 559
Query: 90 QGGRLGLGS----------------ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLM 133
+ +LGL +S K+L+F K + + + H+ +
Sbjct: 560 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYK------IRTIAPGKTHTAAID 613
Query: 134 LSGSVFVCGLNSFHQLGL 151
G + G N QLG+
Sbjct: 614 ERGRLLTFGCNKCGQLGV 631
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 10 RPIDHLIRDRKIDVSS------NQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS 63
RP+ +R R++++ + + +V+ WG + LG G+ + P LL++L+
Sbjct: 152 RPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLV 211
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
+ +V +HSV VS+ G ++ G + G+L L P + N +D + +
Sbjct: 212 MAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL--------PTR-NLAEDGETVAREATE 262
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
+++D S G+ + G +P P V P P S + C R
Sbjct: 263 LNEDGSQVKRTGGA----------EDG-APAPFIAVQPFPALLDLPMGSDAVKASCGSRH 311
Query: 184 HSVVYSSREVYTFGI-HAGQLGHSPVT 209
+VV + E+YT+G GQLGH T
Sbjct: 312 TAVVTRTGELYTWGWGKYGQLGHEDTT 338
Score = 33.1 bits (74), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 11/123 (8%)
Query: 86 CGHGQGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLN 144
G Q GRL L + VSP+ + +L + +H++ L +G VF G
Sbjct: 126 AGEAQAGRLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGG 185
Query: 145 SFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLI--GVCCGRFHSVVYS-SREVYTFGIH-A 200
QLG H + L++ Q L+ V G +HSV S + ++Y +G + +
Sbjct: 186 RHGQLG------HGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNES 239
Query: 201 GQL 203
GQL
Sbjct: 240 GQL 242
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+ +G+ +N LG G+ P+++++L + QV H + V+++ V+S G G
Sbjct: 419 IMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGD 478
Query: 91 GGRLGLGSESSVVSPKKL----NFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
GRLGL ++ S P+++ +FE + GV D S+ + + CG N F
Sbjct: 479 NGRLGLATQDSHNCPQQVSLPADFEAQRVLCGV-------DCSMIMSTQHQILACGNNRF 531
Query: 147 HQLGL-----SPPPSHIVSPTPIPRSSLKSSQPL-----IGVCCGRFHSVVYSSR-EVYT 195
++LGL + PS + L S PL + + G HSV + + + +T
Sbjct: 532 NKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFT 591
Query: 196 FGIHA-GQLGHS 206
FG + GQLG S
Sbjct: 592 FGSNQHGQLGCS 603
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 78/193 (40%), Gaps = 29/193 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EV+ WG N LG +Q + + P+ + ++V S+ +S ++ +CG+
Sbjct: 470 EVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNN 529
Query: 90 QGGRLGL----GSES-------------SVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
+ +LGL G+E +V LN EK + I HSV +
Sbjct: 530 RFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEK------IVYIDIGTAHSVAV 583
Query: 133 MLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSRE 192
G F G N QLG S S S P S L+ + C F + + E
Sbjct: 584 TEKGQCFTFGSNQHGQLGCSHRRS---SRVPYQVSGLQGIT--MAACGDAFTLAIGAEGE 638
Query: 193 VYTFGIHA-GQLG 204
VYT+G A G+LG
Sbjct: 639 VYTWGKGARGRLG 651
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 53 PELLDSLK-----RASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKK 107
PE+L+ ++ ++QV H V ++ + V+S G G+ GRLGL SE +P++
Sbjct: 466 PEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQR 525
Query: 108 LNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVS-----PT 162
++ K L + D + L SG V CGLN F++LGL+ S I++
Sbjct: 526 VDVPK---ALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEV 582
Query: 163 PIPRSSLKSSQ----PLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
P S + Q + + G+ H+ R + TFG + GQLG
Sbjct: 583 PYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 27/213 (12%)
Query: 1 MTVMDNEEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLK 60
+T+++ RP + + I V +++ +EVY+WG + P+ LD +K
Sbjct: 319 VTLLNAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGG------------KSTPQKLDVIK 366
Query: 61 R-ASIKQVCMDKFHSVFVSDDGRVWSCGHGQG-----GRLGLGSESSVVSPKKLNFEKDK 114
S +QVC H V+ + +++ + QG G+LG G ++S PK + EK +
Sbjct: 367 SGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK--HVEKLQ 424
Query: 115 DKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPS-HIVSPTPIPRSSLKSSQ 173
K + S D +V + G ++ G + + +G+ ++ P + + S
Sbjct: 425 GK-AIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQL---NFFLSN 480
Query: 174 PLIGVCCGRFHSVVYS-SREVYTFGI-HAGQLG 204
P+ V CG H VV + ++EVY++G G+LG
Sbjct: 481 PVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLG 513
Score = 34.7 bits (78), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 22/138 (15%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG LG S++ P+ +D K I V + ++ G+V +CG
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLN 559
Query: 90 QGGRLGLGS----------------ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLM 133
+ +LGL +S K+L+F K + + + H+ +
Sbjct: 560 EFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYK------IRTIAPGKTHTAAID 613
Query: 134 LSGSVFVCGLNSFHQLGL 151
G + G N QLG+
Sbjct: 614 ERGRLLTFGCNKCGQLGV 631
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 14/216 (6%)
Query: 15 LIRDRK--IDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKF 72
LIR + ++ ++ +V++WG N LG VP ++L ++ QV
Sbjct: 2943 LIRKKAAGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSK 3002
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVS-PKKLNFEKDKDKLGVAMASISQDHSVF 131
V+ +G+V++CG GRLGLG S V P+++ VA+ S + H+
Sbjct: 3003 SLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR-HATA 3061
Query: 132 LMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSS 190
L + G VF G +LG S + P +LK+ + + + CG HS + SS
Sbjct: 3062 LTVDGKVFSWGEGDDGKLGHF---SRMNCDKPRLIEALKTKR-IRDIACGSSHSAALTSS 3117
Query: 191 REVYTFGI-HAGQLGHSPVTVSSASVIEPKVQATII 225
E+YT+G+ G+LGH T ++PK+ ++
Sbjct: 3118 GELYTWGLGEYGRLGHGDNTTQ----LKPKMVKVLL 3149
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 17/174 (9%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGH 88
+V+ WG LG G P+L++ L+ + +V C +F S+ ++ DG+V+S G
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF-SIALTKDGQVYSWGK 683
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS--- 145
G RLG G+E V PK L + K + VA S H + L V G N
Sbjct: 684 GDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGST---HCLALTEDSEVHSWGSNDQCQ 740
Query: 146 -FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGI 198
F L ++ P P +P K ++G+ CG S +SS ++ G+
Sbjct: 741 HFDTLRVTKP-----EPAALPGLDTKH---IVGIACGPAQSFAWSSCSEWSIGL 786
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGHG 89
V+ WG LG G + ++P+ ++ L + Q+ C +F S+ ++ G VW+ G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQF-SLALTKSGVVWTWGKG 3232
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
RLG GS+ V P+ + + K + VA+ ++ H + + SG V+ G N Q
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGAL---HCLAVTDSGQVYAWGDNDHGQQ 3289
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIH 199
G + V+ P L+ Q + V CG HSV +++ +V T +H
Sbjct: 3290 GNG---TTTVNRKPTLVQGLE-GQKITRVACGSSHSVAWTTVDVATPSVH 3335
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
+V+ WG + LG S+ D P L+++LK I+ + HS ++ G +++ G G
Sbjct: 3067 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLG 3126
Query: 90 QGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQL 149
+ GRLG G ++ + PK + + VA S ++ L G VF G F +L
Sbjct: 3127 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS-RDAQTLALTDEGLVFSWGDGDFGKL 3185
Query: 150 GLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG-RFHSVVYSSREVYTFGI-HAGQLGH-S 206
G + P I R + Q + + CG +F + S V+T+G +LGH S
Sbjct: 3186 GRGGSEGCNI-PQNIER---LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3241
Query: 207 PVTVSSASVIE 217
V V V+E
Sbjct: 3242 DVHVRKPQVVE 3252
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD--KFHSVFVSDDGRVWSCG 87
E+Y WG LG GS + +P L+ LK + V ++ V+++G+VWS G
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G G+LG G +PK + +D D + V S S+ L G V+ G
Sbjct: 631 DGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS---QFSIALTKDGQVYSWGKGDNQ 687
Query: 148 QLG 150
+LG
Sbjct: 688 RLG 690
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 29/238 (12%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCG 87
+ V+ WG LG G VP +DSL + +V C +F SV ++ G V++ G
Sbjct: 4164 DTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF-SVALTKSGAVYTWG 4222
Query: 88 HGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G RLG GS+ V P+++ + K + +A S+ H V G V+ G N
Sbjct: 4223 KGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSL---HCVCCTEDGEVYTWGDNDEG 4279
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSS---QPLIGVCCGRFHSVVYSSREVYTFG------- 197
QLG + I R L ++ + + V CG H++ +S+ + + G
Sbjct: 4280 QLGDG-------TTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVP 4332
Query: 198 IHAGQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHSFTAETSLGPEFG 255
+ L P+ ++ + + +P F E + ET LGP G
Sbjct: 4333 MEYNHLQEIPIIALRNRLLLLHHLSELFCPCIPMFDLEGS-------LDETGLGPSVG 4383
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 85/228 (37%), Gaps = 57/228 (25%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
EVY WG + LG G++ D P +++SL+ + V HS V+ G +++ G G
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118
Query: 90 QGGRLGLGSESSVVSPKKLNF-------------------------------EKDKDKL- 117
+ GRLG + PK + + D KL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4178
Query: 118 -------------------GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHI 158
GV SV L SG+V+ G +H+LG H+
Sbjct: 4179 RGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG-SDDHV 4237
Query: 159 VSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSR-EVYTFGIH-AGQLG 204
P + L+ + +I + G H V + EVYT+G + GQLG
Sbjct: 4238 RRPRQV--QGLQGKK-VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 4282
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ V+ + VY WG + LG GS P + L+ + + H V ++
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE 4266
Query: 80 DGRVWSCGHGQGGRLGLGSESSVVSPK 106
DG V++ G G+LG G+ +++ P+
Sbjct: 4267 DGEVYTWGDNDEGQLGDGTTNAIQRPR 4293
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 52 VPELLDSLKRASIKQVCM--DKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLN 109
P+L+ L +I ++ D H + ++ G V+S G G GGRLG G + PK ++
Sbjct: 483 APQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVIS 542
Query: 110 -FEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSS 168
F + V + +S + G ++ G ++ +LG + P+ +
Sbjct: 543 AFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI---PMLVAG 599
Query: 169 LKSSQPLIGVCCGRFHS---VVYSSREVYTFG 197
LK + +I V CG + V + +V+++G
Sbjct: 600 LKGLK-VIDVACGSGDAQTLAVTENGQVWSWG 630
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 20 KIDVSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSD 79
+ ++ + +VY WG N LG G+++ P+LL+ L+ + V H + +++
Sbjct: 667 QFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Query: 80 DGRVWSCG 87
D V S G
Sbjct: 727 DSEVHSWG 734
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 9/181 (4%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSL--KRAS--IKQVCMDKFHSVFVSDDGRVWS 85
EVY WG LG G + P+++ + K+A + + +S ++ +G +++
Sbjct: 515 EVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYT 574
Query: 86 CGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNS 145
G G GRLG GS P + K + VA S ++ + +G V+ G
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS-GDAQTLAVTENGQVWSWGDGD 633
Query: 146 FHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFGIHAGQ-LG 204
+ +LG TP L+ + C +F + +VY++G Q LG
Sbjct: 634 YGKLGRGGSDG---CKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG 690
Query: 205 H 205
H
Sbjct: 691 H 691
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 23 VSSNQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSV 75
V + EVY WG N LG G+ P L+ +L+ + +V H++
Sbjct: 4262 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
+ QV + HS+F++D G V+SCG G G+ GLG + +P KL D GV +
Sbjct: 229 VVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLG----GDLAGVTVVQ 284
Query: 124 ISQDHSVFLMLS--GSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
++ L LS G VF G + + QL + + P +P S + + + C G
Sbjct: 285 VATYGDCCLALSADGGVFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQV--ACGG 342
Query: 182 RFHSVVYSSREVYTFGIHAGQLGHSPVTVSSA------------SVIEPKVQATIIREDL 229
+V+ + V+ +G G LG P + +A + P+VQ + IR L
Sbjct: 343 TGCAVLNAEGHVFVWGY--GILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGL 400
Query: 230 PGFIFESNRG 239
F +N+G
Sbjct: 401 SHFAALTNKG 410
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 29 NEVYIWGTNANYNLGTGSQ-QTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCG 87
++V+ WG N++ LG G + ++ P+ + SL+ + QV HS +S G + G
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWG 206
Query: 88 HGQGGRLGL-GSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
G+L L G V S K L+ K+ LGV S H+ L G VF G N
Sbjct: 207 SNSAGQLALSGRNVPVQSNKPLSVGALKN-LGVVYISCGDAHTAVLTQDGKVFTFGDNRS 265
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVY--SSREVYTFG 197
QLG SP P P + R SQ + CG +H++ Y ++ +V +FG
Sbjct: 266 GQLGYSPTPEK-RGPQLVERIDGLVSQ----IDCGSYHTLAYVHTTGQVVSFG 313
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 112/280 (40%), Gaps = 69/280 (24%)
Query: 35 GTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRL 94
G N+ LG Q ++PE + +L+ + V K HS+ V GRV++ G G G+L
Sbjct: 48 GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 95 GLGSESSV-VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGL-- 151
G+G + +PKK+ D + + S HS+ L VF G NS QLGL
Sbjct: 108 GIGEFKEISFTPKKIMTLND---IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK 164
Query: 152 ----SPPPSHIVSPTPIPRSS------------------------------------LKS 171
P + S IP + ++S
Sbjct: 165 EFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQS 224
Query: 172 SQPL----------IGVCCGRFHSVVYSSR-EVYTFGIH-AGQLGHSPVTVSSASVIEPK 219
++PL + + CG H+ V + +V+TFG + +GQLG+SP P+
Sbjct: 225 NKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPT---------PE 275
Query: 220 VQATIIREDLPGFIFESNRGTKHSFTAETSLGP--EFGGG 257
+ + E + G + + + G+ H+ + G FG G
Sbjct: 276 KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHG 315
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 62 ASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAM 121
A + Q + HS+ + + RV SCG G+LG P+ + + + L V +
Sbjct: 23 AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPI---QALETLIVDL 79
Query: 122 ASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCG 181
S ++HS+ + G VF G S QLG+ +S TP +L + +I V CG
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKE--ISFTPKKIMTLNDIK-IIQVSCG 136
Query: 182 RFHSVVYS-SREVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRG 239
+HS+ S +V+++G ++ GQLG S AS P+ ++ E +P + + G
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQAS---PQRVRSL--EGIP--LAQVAAG 189
Query: 240 TKHSFTAETSLGPEFGGG 257
HSF A + G FG G
Sbjct: 190 GAHSF-ALSLCGTSFGWG 206
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 29/208 (13%)
Query: 10 RPIDHLIRDRKIDVSS------NQFNEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS 63
RP+ +R R++++ + + +V+ WG + LG G+ + P LL++L+ +
Sbjct: 152 RPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLT 211
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
+ +V +HSV VS+ G ++ G + G+L L P + N +D + +
Sbjct: 212 MAEVAAGGWHSVCVSETGDIYIWGWNESGQLAL--------PTR-NLAEDGETVAREATG 262
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
+++D S + +G V + G +P P V P P L + V CG
Sbjct: 263 LNEDGSQ-VKRTGRV---------EDG-APAPFIAVQPFPA-LLDLPLGSDAVKVSCGSR 310
Query: 184 H-SVVYSSREVYTFGI-HAGQLGHSPVT 209
H +VV + E+YT+G GQLGH T
Sbjct: 311 HTAVVTRTGELYTWGWGKYGQLGHEDTT 338
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 66 QVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASIS 125
Q + HS+ + + RV+SCG G+LG + S P+ + D L V + S
Sbjct: 26 QAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALND---LHVDLVSCG 82
Query: 126 QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS 185
++HSV + G VF G S QLG+ PT I + +I V CG +HS
Sbjct: 83 KEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKI---KALAGIKIIQVSCGHYHS 139
Query: 186 VVYSSR-EVYTFGIHA-GQLGHSPVTVSSASVIEPKVQATIIREDLPGFIFESNRGTKHS 243
+ S V+++G ++ GQLG + S A I KV++ E +P + + G HS
Sbjct: 140 LALSEDGHVFSWGRNSEGQLGLGKNSRSQA--IPQKVKSL---EGIP--LAQVAAGGTHS 192
Query: 244 FTAETSLGPEFGGGWTGKKGKRLRSKLEAVKQKV 277
F A + G F GW + +L VK+++
Sbjct: 193 F-ALSLTGTSF--GWGSNRSGQLALSGNKVKEQI 223
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 70/162 (43%), Gaps = 7/162 (4%)
Query: 29 NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
+ VY G N+ LG Q+ + PE + +L + V K HSV V G+V++ G
Sbjct: 41 HRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGA 100
Query: 89 GQGGRLGLGSESSV-VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFH 147
G G+LG+G + P K+ K + + S HS+ L G VF G NS
Sbjct: 101 GSEGQLGIGEFKEISFMPTKI---KALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157
Query: 148 QLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYS 189
QLGL P + SL+ PL V G HS S
Sbjct: 158 QLGLGKNSRSQAIPQKV--KSLEGI-PLAQVAAGGTHSFALS 196
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 31/195 (15%)
Query: 31 VYIWGTNANYNLGTG-SQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
V+ WG N+ LG G + +++ +P+ + SL+ + QV HS +S G + G
Sbjct: 148 VFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSN 207
Query: 90 QGGRLGLGS---ESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSF 146
+ G+L L + + P + K+ L V S +H+ L G VF G NS
Sbjct: 208 RSGQLALSGNKVKEQIYKPHSIGALKN---LSVIYISCGYEHTAVLTEEGQVFTFGGNSS 264
Query: 147 HQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVC-------CGRFHSVVYSSREVYTFGIH 199
QL P PRS + Q + G+ C +H++ Y VYT G
Sbjct: 265 GQL------------QPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAY----VYTTG-Q 307
Query: 200 AGQLGHSPVTVSSAS 214
LG P S+ +
Sbjct: 308 VVSLGRGPSHTSNPT 322
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 45/215 (20%)
Query: 10 RPIDHLIRDRKIDVSSNQF------NEVYIWGTNANYNLGTGSQQTRDVPELLDSLKRAS 63
+P+ +R R++++ + +V+ WG + LG G+ + P LL++L+
Sbjct: 155 QPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLR 214
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGL----GSESSVVSPKKLNFEKD--KDKL 117
+ +V +HSV +S+ G ++ G + G+L L G+E+ + +D K++L
Sbjct: 215 MAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEEL 274
Query: 118 GVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPR--SSLKSSQPL 175
VA A P+H ++ P P S +
Sbjct: 275 AVADAGA------------------------------PAHFIAIQPFPALLDLPLGSDAV 304
Query: 176 IGVCCGRFHSVVYSSREVYTFGI-HAGQLGHSPVT 209
+ C R +VV + E+YT+G GQLGH T
Sbjct: 305 MASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDST 339
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Query: 37 NANYNLGTGSQQTRDVPELL-DSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLG 95
N+ LG G ++ +P+ L D K S++++ HS V+D G ++ CG + G+LG
Sbjct: 23 NSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLG 82
Query: 96 LGSESSVVSPKKLNFEKDKDKLGVAMASIS--QDHSVFLMLSGSVFVCGLNSFHQLGLSP 153
LG + F K G + ++ D ++ L +G V CG NSF QLG+
Sbjct: 83 LGHTEDIPY-----FTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPH 137
Query: 154 PPSHIVSPTPI 164
P V P I
Sbjct: 138 GPRRCVVPQAI 148
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 18/188 (9%)
Query: 64 IKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMAS 123
+ QV + HS+F++D G V+SCG G G+ GLG + SP KL D + V +
Sbjct: 232 VVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLG--GDLAGVNVIQVA 289
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
D + + G +F G + + QL + + P + S + + C G
Sbjct: 290 TYGDCCLAVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQ--AACGGTG 347
Query: 184 HSVVYSSREVYTFGIHAGQLGHSPVTVSSA------------SVIEPKVQATIIREDLPG 231
+V+ V+ +G G LG P V SA + P++Q + IR L
Sbjct: 348 CAVLNGEGHVFVWGY--GILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSH 405
Query: 232 FIFESNRG 239
F +N+G
Sbjct: 406 FAALTNKG 413
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 15/148 (10%)
Query: 78 SDDGRVWSCGHGQGGRLGL---------GSESSVVSPKKLNFEKDK-DKLGVAMASISQD 127
+D +VW G + +LG G E V+ P ++ D+ + V S +
Sbjct: 126 ADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEY-VLEPSPVSLPLDRPQETRVLQVSCGRA 184
Query: 128 HSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVV 187
HS+ L VF G NS+ Q G + I S + ++ V CG+ HS+
Sbjct: 185 HSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLF 244
Query: 188 YSSR-EVYTFGIHA-GQ--LGHSPVTVS 211
+ + EVY+ G A GQ LGH +T S
Sbjct: 245 LTDKGEVYSCGWGADGQTGLGHYNITSS 272
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 73 HSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFL 132
HS F++D G +++ G G G+LG G+ S SPK + F + K L V + HS+ L
Sbjct: 199 HSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLAL 258
Query: 133 MLSGSVFVCGLNSFHQLGL 151
+ G V+ G N QLGL
Sbjct: 259 TICGKVYSWGGNDSCQLGL 277
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 74 SVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLM 133
S ++D G +++ G G GRLGLG +S ++ + + + M+S HS+ L
Sbjct: 350 SAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSS-GGGHSLVLT 408
Query: 134 LSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQP-----LIGVCCGRFHSVVY 188
G VF G N QLG+ + P I Q +I V G +HS+
Sbjct: 409 NKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAI 468
Query: 189 S-SREVYTFG-IHAGQLGHS---------PVTVSSASVIEPKVQ 221
S + + Y +G G LG S PV ++S SV+ V+
Sbjct: 469 SDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVK 512
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 21 IDVSSNQFNEVYIWGTNANYNLGTG--SQQTRDVPELLDS----LKRASIKQVCMDKFHS 74
I +S N N+ Y WG + LGT Q R++P L++S + V H+
Sbjct: 466 IAISDN--NDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHN 523
Query: 75 VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKK 107
V +S DG ++S G G RLG S+ + ++PKK
Sbjct: 524 VAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKK 556
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 41/186 (22%)
Query: 31 VYIWGTNANYNLGTG---SQQTRDVPELLDSLKRA--------SIKQVCMDKFHSVFVSD 79
V+ +G N LG G +QQT +P+ + + + +I +V +HS+ +SD
Sbjct: 413 VFSFGRNDQGQLGIGCFSNQQT--IPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISD 470
Query: 80 DGRVWSCGHGQGGRLG--------------LGSESSVVSPKKLNFEKDKDKLGVAMASIS 125
+ ++ G G LG + S S VV D + S
Sbjct: 471 NNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVV-----------DNVKFIDVSSG 519
Query: 126 QDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHS 185
H+V + + GS++ G N+ +LG + + S K S+PL+ CG +
Sbjct: 520 FQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKKCFINS--KDSKPLL-FTCGEIIT 576
Query: 186 VVYSSR 191
++ R
Sbjct: 577 IIVEKR 582
Score = 31.2 bits (69), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 31 VYIWGTNANYNLGTGSQQ--TRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGH 88
++ +G + LG G Q + P+L+ SL+ I + HS+ +++ G V+S G
Sbjct: 359 LFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGR 418
Query: 89 GQGGRLGLGSESS 101
G+LG+G S+
Sbjct: 419 NDQGQLGIGCFSN 431
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 17/196 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQ 90
+ +G+ +N LG G+ P ++++L + QV H + +S DG +++ G G
Sbjct: 418 IMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGD 477
Query: 91 GGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLG 150
GGRLGLG+ S P+++ ++ V D S+ L G V CG N F++LG
Sbjct: 478 GGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGI---DSSMILTSPGRVLACGSNRFNKLG 534
Query: 151 L-------SPPPSHIV----SPTPIPRSSLKSSQPLIGVCCGRFHS-VVYSSREVYTFGI 198
L P P V S TP+ + L +PL+ V G HS + +S + YTFG
Sbjct: 535 LDHLSLDEEPVPYQQVEEALSFTPLGSAPL-DQEPLLCVDLGTAHSAAITASGDCYTFGS 593
Query: 199 HA-GQLGHSPVTVSSA 213
+ GQLG S VS A
Sbjct: 594 NQHGQLGTSSRRVSRA 609
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 14/179 (7%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHG 89
E++ WG LG G++++ + P+ + ++V S+ ++ GRV +CG
Sbjct: 469 ELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSN 528
Query: 90 QGGRLGLGSESSVVSP-------KKLNF----EKDKDKLGVAMASISQDHSVFLMLSGSV 138
+ +LGL S P + L+F D+ + + HS + SG
Sbjct: 529 RFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDC 588
Query: 139 FVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSSREVYTFG 197
+ G N QLG S S VS P L+ + ++ C F V + EVY++G
Sbjct: 589 YTFGSNQHGQLGTS---SRRVSRAPCRVQGLEGIKMVMVACGDAFTVAVGAEGEVYSWG 644
Score = 38.1 bits (87), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 30 EVYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQV-CMDKFHSVFVSDDGRVWSCGH 88
+ Y +G+N + LGT S++ P + L+ + V C D F +V V +G V+S G
Sbjct: 587 DCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAF-TVAVGAEGEVYSWGK 645
Query: 89 GQGGRLGLGSESS 101
G GRLG E +
Sbjct: 646 GTRGRLGRRDEDA 658
>sp|P52499|RCC1_CANAX Protein RCC1 OS=Candida albicans GN=RCC1 PE=3 SV=1
Length = 464
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 23/180 (12%)
Query: 21 IDVSSNQFNEVYIWGTNA---------NYNLGTGSQQTRDVPELLDSLKRASIKQVCMDK 71
ID S N VY WG N N L GS + P L+ L IK++ +
Sbjct: 266 IDHSHN----VYAWGLNQYGQCALTGDNGELEDGSVLMK--PTLIPELSHKGIKEIAAGE 319
Query: 72 FHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLN--------FEKDKDKLGVAMAS 123
H++ +++DG+V++ G +G+ + S K+N F ++ + +
Sbjct: 320 HHTLALTEDGQVYAWGRYDMKEIGIPKDKLPKSTFKINTGTHGSFSFLQNLFAVKIKTIG 379
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKSSQPLIGVCCGRF 183
+ HS + G V+ G + GL P + PT I ++ K+ L+ G+F
Sbjct: 380 VGSHHSFAVTEDGVVYAWGFAETYGPGLGPSIDDVEKPTRIVNTATKNEDILLIGAGGQF 439
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 27/210 (12%)
Query: 11 PIDHLIRDRKIDVSSNQFNE----VYIWGTNANYNLGTG-SQQTRDVPELLDSLKRASIK 65
P D + + +K+ VS N V G LG G S R P L+ L+ +
Sbjct: 13 PEDAIPKSKKVKVSHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ--DVV 70
Query: 66 QVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGS--ESSVVSPKKLNFEKDKDKLGVAMAS 123
Q H+V +S G+V+S G G LG + E S + P K+ ++ V S
Sbjct: 71 QAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEK-----VVQVS 125
Query: 124 ISQDHSVFLMLSGSVFVCGLNSFHQ----LGLSPPPSHIVSPTPIPRSSLKSSQPLIGVC 179
H+ L G VF+ G SF +GL P + P + + P++ V
Sbjct: 126 AGDSHTAALTEDGRVFLWG--SFRDNNGVIGLLEPMKKSMVPVQV-----QLDAPVVKVA 178
Query: 180 CGRFHSVVYSSR-EVYTFGI-HAGQLGHSP 207
G H V+ ++ ++YT G GQLG P
Sbjct: 179 SGNDHLVMLTNDGDLYTLGCGEQGQLGRVP 208
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVPELLDSLKRASIKQVCMD--KFHSVFVSDDGRVWSCGH 88
VY +G + + LGT + +P+ L S K ++ V + H+V + +G+ +S G
Sbjct: 261 VYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR 320
Query: 89 GQGGRLGLGSESSVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLS--GSVFVCGLNSF 146
+ GRLGLG + S L +L V ++S++ SV +S G VF G+ +
Sbjct: 321 AEYGRLGLGEGAEEKSIPTL-----ISRLPV-VSSVACGASVGYAVSKDGRVFAWGMGTN 374
Query: 147 HQLG 150
+QLG
Sbjct: 375 YQLG 378
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 42 LGTGSQQTRDVPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESS 101
LG G+++ + +P L+ L + V VS DGRV++ G G +LG G +
Sbjct: 328 LGEGAEE-KSIPTLISRL--PVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDED 384
Query: 102 VVSPKKLNFEKDKDKLGVAMASISQDHSVFLM 133
SP ++ ++ ++++ + ++S Q H+V L+
Sbjct: 385 AWSPVEMTGKQLENRVVLTVSSGGQ-HTVLLV 415
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 72/199 (36%), Gaps = 30/199 (15%)
Query: 7 EEMRPIDHLIRDRKIDVSSNQFNEVYIWGTNANYNLGTGSQ-QTRDVPELL------DSL 59
+ M P+ + + V+S + V + Y LG G Q Q VPEL L
Sbjct: 161 KSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGL 220
Query: 60 KRASIKQVCMDK---------FHSVF--------VSDDGRVWSCGHGQGGRLGLGSESSV 102
R + + + K F F +S +G V+ G +LG S
Sbjct: 221 GRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSC 280
Query: 103 VSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPT 162
P+ L K+ K V + Q H+V + G + G + +LGL PT
Sbjct: 281 FIPQNLTSFKNSTKSWVGFSG-GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPT 339
Query: 163 PIPRSSLKSSQPLIGVCCG 181
I R + SS V CG
Sbjct: 340 LISRLPVVSS-----VACG 353
>sp|P0C5Y8|ALS2_RAT Alsin OS=Rattus norvegicus GN=Als2 PE=2 SV=1
Length = 1651
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 52 VPELLDSLKRASIKQVCMDKFHSVFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKKLNFE 111
PE L ++ Q + H V +++DG V+S G L SE++ + P E
Sbjct: 31 TPERLPGWGGKTVLQAALGVKHGVLLTEDGEVYSF-----GTLPWKSEAAEICPSSPLLE 85
Query: 112 KDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRSSLKS 171
V + HS + SG V++ G N+ Q ++ ++ P+P+ S ++
Sbjct: 86 SALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVA-NQQYVSEPSPVSISDSET 144
Query: 172 SQPLIGV-----CCGRFHSVVYS-SREVYTFGIHAGQLG 204
S PL+ V CG H++ S SRE++ +G QLG
Sbjct: 145 S-PLLAVRILQLACGEEHTLALSISREIWAWGT-GCQLG 181
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 15/153 (9%)
Query: 53 PELLDSLKRASIKQVCMDKFHS-----VFVSDDGRVWSCGHGQGGRLGLGSESSVVSPKK 107
P LL R + V + +S + S VW+ G G+ G+LG G + P
Sbjct: 487 PRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLC 546
Query: 108 LNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCGLNSFHQLGLSPPPSHIVSPTPIPRS 167
+ K+ + + HS+ L V+ G N+F QLG H PT +PR
Sbjct: 547 VKCLDGKEVIHLEAGG---SHSLALTAKSQVYSWGSNTFGQLG------HSEFPTTVPRL 597
Query: 168 SLKSSQP-LIGVCCGRFHSVVYSSREVYTFGIH 199
S SS+ + V G +S+ E + G++
Sbjct: 598 SKVSSESGVWSVAAGHGYSLFLVDTEDFQPGLY 630
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 37/170 (21%)
Query: 31 VYIWGTNANYNLGTGSQQTRDVP---ELLDS----LKRASIKQVCMDKFHSVFVSDDGRV 83
VY+WG NA +QQ P + DS L I Q+ + H++ +S +
Sbjct: 112 VYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLACGEEHTLALSISREI 171
Query: 84 WSCGHGQGGRLGLGSES-SVVSPKKLNFEKDKDKLGVAMASISQDHSVFLMLSGSVFVCG 142
W+ G G +LGL + + V P+K+ + L VA CG
Sbjct: 172 WAW--GTGCQLGLITTTFPVTKPQKVEHLAGRVVLQVA--------------------CG 209
Query: 143 LNSFHQLGLSP--PPSHIVSPTPIPRSSLKSSQPLIGVCCGRFHSVVYSS 190
+FH L L PP + P+P + SQ LI + H ++ S
Sbjct: 210 --AFHSLALVQCLPPQDL---KPVPERCNQCSQLLITMTDKEDHVIISDS 254
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,662,995
Number of Sequences: 539616
Number of extensions: 4482152
Number of successful extensions: 13290
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 12687
Number of HSP's gapped (non-prelim): 353
length of query: 278
length of database: 191,569,459
effective HSP length: 116
effective length of query: 162
effective length of database: 128,974,003
effective search space: 20893788486
effective search space used: 20893788486
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)