Your job contains 1 sequence.
>psy5943
MVGINVLVDLLTLCHLHVSRATHVVQSNVLEAGSGPGLEDEEKEWYYGTSEQSKGPVTFH
QIKHLWSTGELNPKTKVWAHGMESWKSLHQVPQLKWTLVAKNSGGVMNETELGCLILSML
TKVNLENKNTLGV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5943
(133 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015477 - symbol:Rme-8 "Receptor mediated endocyto... 296 1.9e-24 1
WB|WBGene00004378 - symbol:rme-8 species:6239 "Caenorhabd... 206 6.6e-15 1
DICTYBASE|DDB_G0286293 - symbol:dnajc13 "DnaJ (Hsp40) hom... 172 3.1e-11 1
TAIR|locus:2039543 - symbol:GRV2 "GRAVITROPISM DEFECTIVE ... 146 1.8e-08 1
TAIR|locus:2181452 - symbol:ELF9 "EARLY FLOWERING 9" spec... 97 0.00045 1
>FB|FBgn0015477 [details] [associations]
symbol:Rme-8 "Receptor mediated endocytosis 8" species:7227
"Drosophila melanogaster" [GO:0006897 "endocytosis" evidence=NAS]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0031201 "SNARE complex" evidence=IDA] InterPro:IPR016024
InterPro:IPR001623 Pfam:PF00226 EMBL:AE013599 GO:GO:0006898
GO:GO:0005875 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0007298 Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565
PROSITE:PS50076 eggNOG:NOG299042 KO:K09533 OMA:FEVKYEC
RefSeq:NP_610467.1 UniGene:Dm.10763 ProteinModelPortal:A1Z7S0
SMR:A1Z7S0 STRING:A1Z7S0 PaxDb:A1Z7S0 PRIDE:A1Z7S0
EnsemblMetazoa:FBtr0088618 GeneID:35939 KEGG:dme:Dmel_CG8014
UCSC:CG8014-RA CTD:35939 FlyBase:FBgn0015477
GeneTree:ENSGT00390000017582 InParanoid:A1Z7S0 OrthoDB:EOG4JH9WH
PhylomeDB:A1Z7S0 GenomeRNAi:35939 NextBio:795951 Bgee:A1Z7S0
InterPro:IPR025640 Pfam:PF14237 Uniprot:A1Z7S0
Length = 2408
Score = 296 (109.3 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 58/124 (46%), Positives = 80/124 (64%)
Query: 4 INVLVDLLTLCHLHVSRATHVVQSNVLEAGSGPGLEDEEKEWYY-----GTSEQSKGPVT 58
+ LVDL+TL HLH RA ++NV+EAG G EEK+WYY G + +GP+T
Sbjct: 932 VQCLVDLITLAHLHKGRAQLNTKTNVIEAGPNMGTY-EEKDWYYNIEKDGQKPERQGPIT 990
Query: 59 FHQIKHLWSTGELNPKTKVWAHGMESWKSLHQVPQLKWTLVAKNSGGVMNETELGCLILS 118
+ ++K LW G + PKT+ WA GM+ W+SL Q+PQLKW L+AK + + +ETEL IL
Sbjct: 991 YSELKELWQKGLITPKTRCWAIGMDGWRSLQQIPQLKWCLIAKGTP-LYDETELSSKILD 1049
Query: 119 MLTK 122
+L K
Sbjct: 1050 ILIK 1053
>WB|WBGene00004378 [details] [associations]
symbol:rme-8 species:6239 "Caenorhabditis elegans"
[GO:0031072 "heat shock protein binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0007028 "cytoplasm
organization" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0043652 "engulfment of apoptotic cell" evidence=IMP]
[GO:0010008 "endosome membrane" evidence=IDA] [GO:0051087
"chaperone binding" evidence=ISS] [GO:0005769 "early endosome"
evidence=IDA] [GO:0055037 "recycling endosome" evidence=IDA]
[GO:0005770 "late endosome" evidence=IDA] [GO:0042147 "retrograde
transport, endosome to Golgi" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR016024 InterPro:IPR001623
Pfam:PF00226 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0002119 GO:GO:0018996 GO:GO:0010171 GO:GO:0040011
GO:GO:0048477 GO:GO:0010008 GO:GO:0005770 GO:GO:0055037
GO:GO:0051087 GO:GO:0005769 Gene3D:1.10.287.110 SMART:SM00271
SUPFAM:SSF46565 PROSITE:PS50076 GO:GO:0043652 GO:GO:0042147
HSSP:P08622 EMBL:Z75536 KO:K09533 OMA:FEVKYEC GO:GO:0007028
CTD:35939 GeneTree:ENSGT00390000017582 InterPro:IPR025640
Pfam:PF14237 EMBL:AF372457 PIR:T21086 RefSeq:NP_492222.2
UniGene:Cel.9172 ProteinModelPortal:G5ED36 SMR:G5ED36 PRIDE:G5ED36
EnsemblMetazoa:F18C12.2a.1 EnsemblMetazoa:F18C12.2a.2 GeneID:172594
KEGG:cel:CELE_F18C12.2 WormBase:F18C12.2a NextBio:876169
Uniprot:G5ED36
Length = 2279
Score = 206 (77.6 bits), Expect = 6.6e-15, P = 6.6e-15
Identities = 49/132 (37%), Positives = 75/132 (56%)
Query: 6 VLVDLLTLCHLHVSRATHVVQSNVLEAGSGPGLEDEEKEWYYGTSEQSK-GPVTFHQIKH 64
+LVDL L HLHV RA Q+NV+EA + E +EWYY + + GP++F ++K
Sbjct: 944 LLVDLCVLAHLHVQRAKVQNQTNVIEASAEQMAEGGSEEWYYHDKDAKQVGPLSFEKMKS 1003
Query: 65 LWSTGELNPKTKVWAHGMESWKSLHQVPQLKWTLVAK-------NSG-G-----VMNETE 111
L++ + K+++WA GM+ W SL VPQ +WT+ + N+G G VMN T+
Sbjct: 1004 LYTEKTIFEKSQIWAAGMDKWMSLAAVPQFRWTVCQQKDQPNEINTGKGPFQATVMNFTD 1063
Query: 112 LGCLILSMLTKV 123
L L L + ++
Sbjct: 1064 LSVLCLDTILQM 1075
>DICTYBASE|DDB_G0286293 [details] [associations]
symbol:dnajc13 "DnaJ (Hsp40) homolog, subfamily C,
member 13" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR016024 InterPro:IPR001623
dictyBase:DDB_G0286293 Pfam:PF00226 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GenomeReviews:CM000153_GR
EMBL:AAFI02000085 eggNOG:COG0484 Gene3D:1.10.287.110 SMART:SM00271
SUPFAM:SSF46565 PROSITE:PS50076 KO:K09533 InterPro:IPR025640
Pfam:PF14237 RefSeq:XP_637838.1 ProteinModelPortal:Q54LZ3
EnsemblProtists:DDB0238597 GeneID:8625552 KEGG:ddi:DDB_G0286293
OMA:RIMIANI Uniprot:Q54LZ3
Length = 2592
Score = 172 (65.6 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 44/122 (36%), Positives = 66/122 (54%)
Query: 3 GINVLVDLLTLCHLHVSRATHVVQSNVLEAGSGPGLEDEEKEWYYGTSEQSKGPVTFHQI 62
GI L+DL+TL H H T+ + +L D ++E +Q GPV+ +
Sbjct: 990 GIYRLLDLITLIHTHY---TYGEEGKLLPEWYYA--VDVQQEGSGVIQQQKAGPVSRTDL 1044
Query: 63 KHLWSTGELNPKTKVWAHGMESWKSLHQVPQLKWT----LVAKNSGGVMNETELGCLILS 118
L ++ ++N TK WA G E WK L+Q+P+L+WT L N GGV+ + ELG +IL
Sbjct: 1045 FDLLNSKKINRNTKCWAQGTEKWKPLYQIPELRWTIMNGLTHGNVGGVLPKAELGSVILD 1104
Query: 119 ML 120
+L
Sbjct: 1105 IL 1106
>TAIR|locus:2039543 [details] [associations]
symbol:GRV2 "GRAVITROPISM DEFECTIVE 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0006457 "protein folding" evidence=ISS] [GO:0031072 "heat shock
protein binding" evidence=IEA] [GO:0005773 "vacuole" evidence=IDA]
[GO:0006897 "endocytosis" evidence=ISS] [GO:0009660 "amyloplast
organization" evidence=IMP] [GO:0009958 "positive gravitropism"
evidence=IMP] [GO:0009959 "negative gravitropism" evidence=IMP]
[GO:0007032 "endosome organization" evidence=IMP] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA;IMP] [GO:0005770 "late endosome" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007033 "vacuole organization" evidence=RCA;IMP] [GO:0042594
"response to starvation" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR016024 InterPro:IPR001623 Pfam:PF00226 GO:GO:0005783
GO:GO:0005794 GO:GO:0005774 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
GO:GO:0031902 GO:GO:0006897 GO:GO:0042594 EMBL:AC005168
GO:GO:0009793 GO:GO:0005802 GO:GO:0007032 GO:GO:0007033
GO:GO:0006623 Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565
PROSITE:PS00636 PROSITE:PS50076 GO:GO:0045324 GO:GO:0000578
GO:GO:0009638 HSSP:P25685 IPI:IPI00522948 PIR:T02646
RefSeq:NP_180257.3 UniGene:At.12880 UniGene:At.67106 PRIDE:F4IVL6
EnsemblPlants:AT2G26890.1 GeneID:817230 KEGG:ath:AT2G26890
TAIR:At2g26890 eggNOG:NOG299042 HOGENOM:HOG000243604 KO:K09533
OMA:FEVKYEC ProtClustDB:CLSN2681170 GO:GO:0009660 GO:GO:0009959
Uniprot:F4IVL6
Length = 2554
Score = 146 (56.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 41/122 (33%), Positives = 65/122 (53%)
Query: 1 MVGINVL-VDLLTLCHLHVSRATHVVQSNVLEAGSGPGLEDEEKEWYYGTSEQSK-GPVT 58
+VG VL VDLLT+ H + R +QSN++ A + + KEW Y ++ GPV
Sbjct: 1127 VVGGCVLAVDLLTVVHENSERTPIPLQSNLIAATA---FMEPPKEWMYIDKGGAEVGPVE 1183
Query: 59 FHQIKHLWSTGELNPKTKVWAHGMESWKSLHQVPQLKWTLVAKNSGGVMNETELGCLILS 118
I+ LWS +++ TK A GM WK L + +L+W + + V+ +++G LS
Sbjct: 1184 KDVIRSLWSKKDIDWTTKCRALGMSDWKKLRDIRELRWAVAVRVP--VLTPSQVGDAALS 1241
Query: 119 ML 120
+L
Sbjct: 1242 IL 1243
>TAIR|locus:2181452 [details] [associations]
symbol:ELF9 "EARLY FLOWERING 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0009910 "negative regulation of flower
development" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=RCA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0016246 "RNA interference"
evidence=RCA] InterPro:IPR000504 InterPro:IPR003169
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005829 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0000184 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0009910 SUPFAM:SSF55277 HSSP:Q01081 EMBL:AL391148
eggNOG:NOG317500 KO:K13093 InterPro:IPR025640 Pfam:PF14237
OMA:AAYQANY EMBL:BT022024 EMBL:AK229192 IPI:IPI00529602 PIR:T51496
RefSeq:NP_197130.1 UniGene:At.10000 ProteinModelPortal:Q9LF02
SMR:Q9LF02 PaxDb:Q9LF02 PRIDE:Q9LF02 EnsemblPlants:AT5G16260.1
GeneID:831486 KEGG:ath:AT5G16260 TAIR:At5g16260
HOGENOM:HOG000240892 InParanoid:Q9LF02 PhylomeDB:Q9LF02
ProtClustDB:CLSN2916222 Genevestigator:Q9LF02 Uniprot:Q9LF02
Length = 519
Score = 97 (39.2 bits), Expect = 0.00045, P = 0.00045
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 45 WYY-GTSEQSKGPVTFHQIKHLWSTGELNPKTKVWAHGMESWKSLHQVPQL 94
WY G ++Q+ GP TF ++ + + G L T VWA G W+ L +P L
Sbjct: 25 WYILGENQQNLGPYTFSELCNHFRNGYLLETTLVWADGRSEWQPLSAIPDL 75
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 133 133 0.00091 102 3 11 23 0.46 31
30 0.43 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 609 (65 KB)
Total size of DFA: 161 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.23u 0.07s 14.30t Elapsed: 00:00:15
Total cpu time: 14.23u 0.07s 14.30t Elapsed: 00:00:16
Start: Thu Aug 15 12:58:49 2013 End: Thu Aug 15 12:59:05 2013