RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy5943
         (133 letters)



>d1wh2a_ d.76.1.1 (A:) Hypothetical rotein At5g08430 {Thale cress
          (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 78

 Score = 29.0 bits (65), Expect = 0.049
 Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 1/45 (2%)

Query: 38 LEDEEKEWYY-GTSEQSKGPVTFHQIKHLWSTGELNPKTKVWAHG 81
           + E+  W Y       +GP +  Q+K          + +VW  G
Sbjct: 13 YDKEKLNWLYKDPQGLVQGPFSLTQLKAWSDAEYFTKQFRVWMTG 57


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.314    0.131    0.403 

Gapped
Lambda     K      H
   0.267   0.0635    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 473,922
Number of extensions: 18511
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 133
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 57
Effective length of database: 1,364,116
Effective search space: 77754612
Effective search space used: 77754612
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 48 (22.5 bits)