Query psy5945
Match_columns 568
No_of_seqs 271 out of 591
Neff 4.5
Searched_HMMs 46136
Date Fri Aug 16 22:29:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5945.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5945hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03567 Sulfotransfer_2: Sulf 99.9 1E-29 2.3E-34 242.2 -1.9 183 68-263 1-192 (253)
2 KOG4651|consensus 99.9 1.5E-28 3.3E-33 254.9 3.3 253 31-322 45-302 (324)
3 cd07451 CRD_SMO Cysteine-rich 99.8 8.8E-22 1.9E-26 181.3 1.7 82 485-567 33-116 (132)
4 smart00063 FRI Frizzled. Droso 99.5 2.2E-14 4.7E-19 129.1 3.2 73 487-563 29-106 (113)
5 cd07448 CRD_FZ4 Cysteine-rich 99.4 1.7E-13 3.7E-18 125.7 2.6 76 486-565 31-112 (126)
6 cd07450 CRD_FZ6 Cysteine-rich 99.3 3.3E-13 7.2E-18 124.0 1.7 73 486-562 32-109 (127)
7 cd07443 CRD_SFRP1 Cysteine-ric 99.3 6.5E-13 1.4E-17 121.7 2.4 76 486-566 36-116 (124)
8 cd07449 CRD_FZ3 Cysteine-rich 99.3 9.9E-13 2.1E-17 120.9 2.6 73 488-564 34-111 (127)
9 cd07457 CRD_FZ9_like Cysteine- 99.2 2.9E-12 6.3E-17 116.9 2.3 72 488-563 32-109 (121)
10 cd07447 CRD_Carboxypeptidase_Z 99.2 3.7E-12 8E-17 117.3 2.7 66 493-562 43-112 (128)
11 cd07445 CRD_corin_1 One of two 99.2 8.4E-12 1.8E-16 115.2 2.8 71 488-562 33-111 (130)
12 cd07458 CRD_FZ1_like Cysteine- 99.1 1.5E-11 3.3E-16 112.0 2.4 71 489-563 33-108 (119)
13 cd07452 CRD_sizzled Cysteine-r 99.1 1.9E-11 4.1E-16 114.3 2.7 72 487-563 39-114 (141)
14 cd07444 CRD_SFRP5 Cysteine-ric 99.1 2.6E-11 5.6E-16 111.7 2.6 77 486-567 36-118 (127)
15 cd07464 CRD_FZ2 Cysteine-rich 99.1 2.9E-11 6.3E-16 111.3 2.4 73 487-563 33-110 (127)
16 cd07456 CRD_FZ5_like Cysteine- 99.1 3.2E-11 6.9E-16 110.0 2.4 72 488-563 31-108 (120)
17 cd07461 CRD_FZ8 Cysteine-rich 99.1 4.7E-11 1E-15 109.6 2.3 72 488-563 34-111 (125)
18 cd07460 CRD_FZ5 Cysteine-rich 99.1 4.9E-11 1.1E-15 109.8 2.2 74 486-563 32-111 (127)
19 cd07441 CRD_SFRP3 Cysteine-ric 99.1 6.1E-11 1.3E-15 109.1 2.2 74 486-563 31-111 (126)
20 cd07442 CRD_SFRP4 Cysteine-ric 99.0 7.8E-11 1.7E-15 108.5 2.4 74 486-563 32-112 (127)
21 cd07466 CRD_FZ7 Cysteine-rich 99.0 9.6E-11 2.1E-15 107.6 2.5 74 486-563 32-110 (125)
22 cd07463 CRD_FZ9 Cysteine-rich 99.0 9.5E-11 2.1E-15 107.9 2.3 74 487-564 33-112 (127)
23 cd07462 CRD_FZ10 Cysteine-rich 99.0 1.1E-10 2.3E-15 107.6 2.6 71 489-563 35-111 (127)
24 cd07465 CRD_FZ1 Cysteine-rich 99.0 1E-10 2.2E-15 107.8 2.3 73 487-563 33-110 (127)
25 cd07454 CRD_LIN_17 Cysteine-ri 99.0 1.7E-10 3.7E-15 105.9 2.5 71 488-562 34-110 (124)
26 cd07446 CRD_SFRP2 Cysteine-ric 99.0 2.1E-10 4.6E-15 105.8 2.6 73 486-562 34-112 (128)
27 cd07888 CRD_corin_2 One of two 98.9 3.1E-10 6.8E-15 103.8 2.6 67 493-563 38-110 (122)
28 cd07453 CRD_crescent Cysteine- 98.9 3.7E-10 8.1E-15 105.0 2.3 70 488-562 34-107 (135)
29 KOG3577|consensus 98.9 4.7E-10 1E-14 124.7 3.2 73 487-563 71-149 (556)
30 cd07455 CRD_Collagen_XVIII Cys 98.9 5.2E-10 1.1E-14 102.6 2.3 73 487-564 35-110 (123)
31 PF01392 Fz: Fz domain; Inter 98.7 4.9E-09 1.1E-13 91.7 1.6 72 487-562 29-107 (116)
32 cd07066 CRD_FZ CRD_domain cyst 98.6 2.1E-08 4.5E-13 89.5 2.8 72 487-562 30-107 (119)
33 KOG3922|consensus 96.6 0.0025 5.5E-08 66.8 4.7 22 78-99 81-102 (361)
34 PF06990 Gal-3-0_sulfotr: Gala 94.3 0.087 1.9E-06 57.5 6.5 86 73-158 64-168 (402)
35 PLN02164 sulfotransferase 91.3 0.64 1.4E-05 49.9 7.7 28 72-99 76-103 (346)
36 cd07459 CRD_TK_ROR_like Cystei 87.5 0.53 1.1E-05 44.1 3.2 53 493-545 39-97 (135)
37 KOG1584|consensus 79.0 9.8 0.00021 40.5 8.7 88 139-265 125-217 (297)
38 PF12929 Mid1: Stretch-activat 57.9 6.3 0.00014 43.8 2.1 52 494-545 292-392 (427)
39 PF00685 Sulfotransfer_1: Sulf 50.1 5.8 0.00013 38.3 0.3 23 77-99 3-25 (267)
40 cd07469 CRD_TK_ROR_related Cys 32.7 37 0.00079 32.9 2.7 54 489-542 35-97 (147)
41 cd07467 CRD_TK_ROR1 Cysteine-r 31.4 36 0.00079 32.7 2.4 37 503-539 52-92 (142)
42 cd07468 CRD_TK_ROR2 Cysteine-r 27.9 47 0.001 31.9 2.5 37 503-539 52-92 (140)
43 PF10470 AKAP7_RIRII_bdg: PKA- 23.8 70 0.0015 26.5 2.4 22 316-337 5-26 (61)
No 1
>PF03567 Sulfotransfer_2: Sulfotransferase family; InterPro: IPR005331 This entry consists of a number of carbohydrate sulphotransferases that transfer sulphate to carbohydrate groups in glycoproteins and glycolipids. These include: Carbohydrate sulphotransferases 8 and 9, which transfer sulphate to position 4 of non-reducing N-acetylgalactosamine (GalNAc) residues in both N-glycans and O-glycans []. They function in the biosynthesis of glycoprotein hormones lutropin and thyrotropin, by mediating sulphation of their carbohydrate structures. Carbohydrate sulphotransferase 10, which transfers sulphate to position 3 of the terminal glucuronic acid in both protein- and lipid-linked oligosaccharides []. It directs the biosynthesis of the HNK-1 carbohydrate structure, a sulphated glucuronyl-lactosaminyl residue carried by many neural recognition molecules, which is involved in cell interactions during ontogenetic development and in synaptic plasticity in the adult. Carbohydrate sulphotransferases 11 - 13, which catalyze the transfer of sulphate to position 4 of the GalNAc residue of chondroitin []. Chondroitin sulphate constitutes the predominant proteoglycan present in cartilage and is distributed on the surfaces of many cells and extracellular matrices. Some, thought not all, of these enzymes also transfer sulphate to dermatan. Carbohydrate sulphotransferase D4ST1, which transfers sulphate to position 4 of the GalNAc residue of dermatan sulphate []. Heparan sulphate 2-O-sulphotransferase (HS2ST). Heparan sulphate (HS) is a co-receptor for a number of growth factors, morphogens, and adhesion proteins. HS biosynthetic modifications may determine the strength and outcome of HS-ligand interactions. Mice that lack HS2ST undergo developmental failure only after midgestation,the most dramatic effect being the complete failure of kidney development []. Heparan-sulphate 6-O-sulphotransferase (HS6ST), which catalyses the transfer of sulphate from adenosine 3'-phosphate, 5'-phosphosulphate to the 6th position of the N -sulphoglucosamine residue in heparan sulphate []. Chondroitin 6-sulphotransferase catalyses the transfer of sulphate to position 6 of the N-acetylgalactosamine residue of chondroitin []. ; GO: 0008146 sulfotransferase activity, 0016021 integral to membrane; PDB: 3F5F_A.
Probab=99.95 E-value=1e-29 Score=242.19 Aligned_cols=183 Identities=36% Similarity=0.662 Sum_probs=95.5
Q ss_pred ccEEEECCccEEEEecCcchhHHHHHHHHHHhCCCCC-CCCCCCChhhhcc-------cccCccccCCCHHHHHHhhhcc
Q psy5945 68 EHILVDKKHKLLYCYVPKVACTNWKRIFLILVGQINT-TDPSSIPADVAHK-------LTMNYKLSNFSKDEIHHFLESY 139 (568)
Q Consensus 68 ~h~iVsdkhKLIYC~IPKvAcTSWKrvL~~L~G~~~~-~Dp~~Ip~~~vH~-------~~~lk~Ls~ys~eei~~~Lk~Y 139 (568)
.|++++++|+++||+|||||||||+.+|..+.|. .. .+...++....|. ...+..+..++..+....+++|
T Consensus 1 ~~~~~~~~~~i~f~~ipK~g~Ts~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (253)
T PF03567_consen 1 NHFIISPKHKIIFCHIPKTGGTSLKSILRRLYGK-EFTKDNPSIPENWLHFKRYCGWGHIEFRDLSELSRQEFDRILNSY 79 (253)
T ss_dssp ------S--EEEE---SSSSHHHHHHHHHHHHHG-S---HHHHHHHH-GGG-SEEEEES-----GGGGT-SS--------
T ss_pred CCCccCCCCcEEEEecCCHHHHHHHHHHHHHhhh-hhhccccccccccccccchhhhhhHHHhHHhhcchhhccccccce
Confidence 4899999999999999999999999999998772 11 1111111111211 1223334444444444556689
Q ss_pred eEEEEeeCCccccccccchhhhhcCCCchhhHhHHHHHHHHhhcCCCCCcCCCCCCCCCHHHHHHHHHhcC-CCCCcCcc
Q psy5945 140 TKFLFVRHPFERLVSAFHNKLEQSYSSSKYFQSRFGKHIIKTIRTRPTNHSLNHGDDVTFNEFATFLTKNG-RGEEMNEH 218 (568)
Q Consensus 140 fKF~FVRNPfERLVSAYrDKf~~~~~~~~~f~~~~G~~IIkkyR~~a~~eal~~~~~vSFeEFV~yL~dt~-~~~~~D~H 218 (568)
++|+|||||++|++|+|++|+.........+ .+..+.+.++......++ .....+|++|++|+.+.. .....|.|
T Consensus 80 ~~~t~vRdP~~R~vS~y~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~f~~f~~~~~~~~~~~~~~d~h 155 (253)
T PF03567_consen 80 FKFTFVRDPVDRLVSAYYDKIRRGNRRQCYW---CGPNLRKFFRLPNCYEGF-DESDCSFEEFLDYLSDHWTRCSWMDRH 155 (253)
T ss_dssp EEEEEE--HHHHHHHHHHHHHH-BSS---------S-SS--TT--------------S----HHHHHHTT-STT-GGG-S
T ss_pred EEEEEeCCHHHHHHHHHHHHHhcCcccccch---hhhHHHhhhccccccccc-cccccchHHHHHHHhcCCccccccccc
Confidence 9999999999999999999997543200111 122333333311111222 344599999999998543 22348999
Q ss_pred cccccccccCCcceeeEEEecCCCCCCcccchHHHHHHHHHHhCC
Q psy5945 219 WRPVHHLCQPCKINYDFIGKEIPNYPRKHETLYEDANLLLREIGV 263 (568)
Q Consensus 219 W~Pq~~LC~PC~I~YDFIGK~~~~~~~~lETLeeD~~~VL~~LGl 263 (568)
|+||..+|.+|...|||||+ +|++++|++.+++.+|+
T Consensus 156 ~~p~~~~~~~~~~~~d~Vg~--------~E~~~~~~~~l~~~~~~ 192 (253)
T PF03567_consen 156 WRPQCDFCQPCLRDYDFVGR--------LENFDEDLRRLLRLLGL 192 (253)
T ss_dssp GSTHHHHHHHHHHTEEEEEE--------GGGHHHHHHHHHHH-HH
T ss_pred ccchhhhhcccccccceeee--------cccHHHHHHHHHHhhhh
Confidence 99999999999999999999 99999999999999999
No 2
>KOG4651|consensus
Probab=99.94 E-value=1.5e-28 Score=254.88 Aligned_cols=253 Identities=25% Similarity=0.299 Sum_probs=188.3
Q ss_pred cchHHHHHHHHHHHHHHhhcCcCCCCCCcccccccccccEEEECCccEEEEecCcchhHHHHHHHHHHhCCCCCCCCCCC
Q psy5945 31 KNWSLTHFERLEYLTSQCLTYKEDLNKSSVLEDEQVLEHILVDKKHKLLYCYVPKVACTNWKRIFLILVGQINTTDPSSI 110 (568)
Q Consensus 31 ~~~e~iq~~Rr~~Lre~C~k~~~~~~~~~~L~~~~~l~h~iVsdkhKLIYC~IPKvAcTSWKrvL~~L~G~~~~~Dp~~I 110 (568)
......+..|+..+++.|....... ..-..++.|+++||+++|.|||++||.|+++|++|.|...+.+...+
T Consensus 45 ~~~~~~~~~~~~~~~d~i~pf~~~~--------~~~~~~~~vapk~kl~~C~I~Ksms~l~~nimc~L~n~~~y~~~~~~ 116 (324)
T KOG4651|consen 45 INPGKLQDFRRSSVQDFIPPFVPFS--------QGFFDHLKVAPKYKLIYCEIPKSMSTLWTNIMCLLYNETQYTADNRS 116 (324)
T ss_pred ccchhHHhhhchhhhhhcccCCchh--------hhhhhcceeCCCCceEEEeecccHhhhhhhhheeEeChhhhcccccc
Confidence 4456677777778888888642111 01111788999999999999999999999999999987655555566
Q ss_pred ChhhhcccccCcccc-CCCHHHHH-HhhhcceEEEEeeCCccccccccchhhhhcCCCchhhHhHHHHHHHHhhcCCCCC
Q psy5945 111 PADVAHKLTMNYKLS-NFSKDEIH-HFLESYTKFLFVRHPFERLVSAFHNKLEQSYSSSKYFQSRFGKHIIKTIRTRPTN 188 (568)
Q Consensus 111 p~~~vH~~~~lk~Ls-~ys~eei~-~~Lk~YfKF~FVRNPfERLVSAYrDKf~~~~~~~~~f~~~~G~~IIkkyR~~a~~ 188 (568)
..+..|......... ++..+.+. .++++|+||+||||||+|+||+|+||+....+ .++.+..+.-|+++++.+...
T Consensus 117 ~~~~w~~~~~c~~~~~~f~~~~~~~~~~~~~~kfaFIRDP~eRFVS~y~dKcv~~~~--cy~c~~~m~civ~k~y~~~~~ 194 (324)
T KOG4651|consen 117 LSDTWHTSRSCEKEDKSFMNPSILLKNLKDTVKFAFIRDPFERFVSAYLDKCVNENN--CYDCGTNMRCIVKKIYKRLKR 194 (324)
T ss_pred chHHHhhccccccchhhccCHHHHhhcccCeEEEEEecCcHHHHHHHHHHHHhcccc--ccCCcccHHHHHHHHHHHhhh
Confidence 666677654443333 45555555 67889999999999999999999999998743 366667888888888766543
Q ss_pred cCCCCCCCCCHHHHHHHHHhcC---CCCCcCcccccccccccCCcceeeEEEecCCCCCCcccchHHHHHHHHHHhCCCC
Q psy5945 189 HSLNHGDDVTFNEFATFLTKNG---RGEEMNEHWRPVHHLCQPCKINYDFIGKEIPNYPRKHETLYEDANLLLREIGVPQ 265 (568)
Q Consensus 189 eal~~~~~vSFeEFV~yL~dt~---~~~~~D~HW~Pq~~LC~PC~I~YDFIGK~~~~~~~~lETLeeD~~~VL~~LGlp~ 265 (568)
.+.+.+.+++|.+|++++.+.. .+...|.||.+...+|+||.++|++||+ +|++.+|+...++.++...
T Consensus 195 ~~~~~~~g~~~~~fv~~h~aP~tWnc~f~~~~~~~~~i~~~~~~~~r~~~i~~--------L~~il~~q~v~~~~i~~i~ 266 (324)
T KOG4651|consen 195 EAQNRGDGVTFEEFVDYHAAPQTWNCDFNKDIHKWELIKLGSDCEERYSFIGK--------LETILKDQGVPLELIEKIS 266 (324)
T ss_pred hhhcCCCCCcchHHHHHhcCcccccCCCCCCcchheeeecCCCHHHHHHHHHH--------HHHHHHHcCCcHHHHHHHH
Confidence 4444456699999999999653 2677899999999999999999999999 9999999999999999998
Q ss_pred cccccccccccceeeeecCCCCCCCCCCccccccccccccHhhhhhCCCCChhHHhh
Q psy5945 266 KFNQNFSFKVKNTEVSFERIKECGPRGGAEAQNRGDRQFNMEIRITNLPKDLPEFLN 322 (568)
Q Consensus 266 ~~~~~~~~~~~~~~v~fP~~~~s~p~~~~~~~~~~~r~~~~~~y~~~l~~~l~~~~~ 322 (568)
...+|.-...+++.+.. + ....++-+.++-...+|+
T Consensus 267 -------------~~~~~~~t~hst~~s~~-r-------~~~~~~~~~d~~~r~~L~ 302 (324)
T KOG4651|consen 267 -------------NELLPGETPHSTHKSSA-R-------LEAERQVREDPLIRQYLH 302 (324)
T ss_pred -------------HhcccCcCcCccCCCcH-H-------HHHHHHhhCCHHHHHHHH
Confidence 66777222222333321 1 345666666665555554
No 3
>cd07451 CRD_SMO Cysteine-rich domain of the smoothened receptor (Smo) integral membrane protein. The cysteine-rich domain (CRD) is part of the smoothened receptor (Smo), an integral membrane protein and one of the key players in the Hedgehog (Hh) signaling pathway, critical for development, cell growth and migration, as well as stem cell maintenance. The CRD of Smo is conserved in vertebrates and can also be identified in invertebrates. The precise function of the CRD in Smo is unknown. Mutations in the Drosophila CRD disrupt Smo activity in vivo, while deletion of the CRD in mammalian cells does not seem to affect the activity of overexpressed Smo.
Probab=99.83 E-value=8.8e-22 Score=181.33 Aligned_cols=82 Identities=50% Similarity=1.081 Sum_probs=74.5
Q ss_pred cccchhHhHhhhhccccCcchhHHhHHhHhhccccCCCCCccccccHHHHHHhcCccccccccc-CCcc-cccCCCccCc
Q psy5945 485 GVDVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCEDNVVSVPSQEVCKLLSGPCRIVAQEL-SPEF-NCQNGTKISS 562 (568)
Q Consensus 485 ~~~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~~~v~lp~~~mC~~~~~~C~~l~~~~-~P~~-~c~~~~~~~~ 562 (568)
..+.++++|+.|++|.++|+||++||+||||||+|+|+++++.+|||+||++||++|+++|.++ ||+| +|++ ..+|+
T Consensus 33 tq~ea~~~l~~f~pLv~vp~C~~~l~~FLCSly~P~C~~~~~~~PCRslCe~vr~~C~~~m~~~~WP~~L~C~~-~p~~~ 111 (132)
T cd07451 33 TQEEVQEKLHLWSGLRNVPKCWAVIQPLLCALYMPKCENGKVELPSQEMCQATRGPCKIVENERGWPDFLRCDN-DRFPP 111 (132)
T ss_pred CHHHHHHHHHHHHHHHhhcccchhheeeeEeeECCcCCCCCccCCCHHHHHHHHHHHHHHHHcCCCCCcCcCCC-CCCcc
Confidence 3557788999999999999999999999999999999999999999999999999999999777 9999 9975 45668
Q ss_pred ccccc
Q psy5945 563 HSCKA 567 (568)
Q Consensus 563 ~~ck~ 567 (568)
+.|+.
T Consensus 112 ~~C~~ 116 (132)
T cd07451 112 RGCKN 116 (132)
T ss_pred ccCCC
Confidence 88873
No 4
>smart00063 FRI Frizzled. Drosophila melanogaster frizzled mediates signalling that polarises a precursor cell along the anteroposterior axis. Homologues of the N-terminal region of frizzled exist either as transmembrane or secreted molecules. Frizzled homologues are reported to be receptors for the Wnt growth factors. (Not yet in MEDLINE: the FRI domain occurs in several receptor tyrosine kinases [Xu, Y.K. and Nusse, Curr. Biol. 8 R405-R406 (1998); Masiakowski, P. and Yanopoulos, G.D., Curr. Biol. 8, R407 (1998)].
Probab=99.46 E-value=2.2e-14 Score=129.10 Aligned_cols=73 Identities=23% Similarity=0.664 Sum_probs=63.8
Q ss_pred cchhHhHhhhhccccCcchhHHhHHhHhhccccCCCCCcc-ccccHHHHHHhcCccccccccc---CCcc-cccCCCccC
Q psy5945 487 DVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCEDNVV-SVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKIS 561 (568)
Q Consensus 487 ~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~~~v-~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~ 561 (568)
+.+..+|..|..|.+++ ||+.||+||||+|+|+|..+.. .+|||++|+.+|+.|..++..+ ||++ +|+ .||
T Consensus 29 ~ea~~~l~~~~~L~~~~-C~p~l~~flCsl~~P~C~~~~~~~~PCRs~Ce~vr~~C~~~~~~~g~~WP~~l~C~---~fP 104 (113)
T smart00063 29 EEAGLELEQFHPLLNVQ-CSPDLRFFLCSVYAPICTEDLRPILPCRSLCEAAREGCEPLMEKFGFPWPEFLRCD---RFP 104 (113)
T ss_pred HHHHHHHHHHHhhccCC-CChhHHHHhHhccCcccCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCCCCcCCcc---cCC
Confidence 34556799999999997 9999999999999999977654 8999999999999999999544 9998 997 677
Q ss_pred cc
Q psy5945 562 SH 563 (568)
Q Consensus 562 ~~ 563 (568)
..
T Consensus 105 ~~ 106 (113)
T smart00063 105 VQ 106 (113)
T ss_pred CC
Confidence 54
No 5
>cd07448 CRD_FZ4 Cysteine-rich Wnt-binding domain of the frizzled 4 (Fz4) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 4 (Fz4) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and the Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Frizzled 4 (Fz4) activates the Ca(2+)/calmodulin-dependent protein kinase II and protein kinase C of the Wnt/Ca(2+) signaling pathway during retinal angiogenesis. Mutations in Fz4 lead to familial exudative vitreoretinopathy (FEVR
Probab=99.37 E-value=1.7e-13 Score=125.71 Aligned_cols=76 Identities=26% Similarity=0.530 Sum_probs=65.4
Q ss_pred ccchhHhHhhhhccccCcchhHHhHHhHhhccccCCCCC--ccccccHHHHHHhcCccccccccc---CCcc-cccCCCc
Q psy5945 486 VDVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCEDN--VVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTK 559 (568)
Q Consensus 486 ~~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~~--~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~ 559 (568)
.+.+...|+.|..|-++ .||+.|+.||||+|+|+|..+ +..+|||++|+.+|+.|..+|..+ ||++ +|+ .
T Consensus 31 q~ea~~~l~~~~pLv~~-~Csp~l~~flCsl~~P~C~~~~~~~i~PCRslCe~vr~~C~~~m~~~g~~WP~~l~C~---~ 106 (126)
T cd07448 31 QTDAELQLQTFTPLIQY-GCSSQLKFFLCSVYVPMCTEKVPVPIGPCRPLCLSVKKRCLPVLKEFGFPWPEALNCS---K 106 (126)
T ss_pred HHHHHHHHHHHHHHhhc-CCChhHHhHhhhccccccCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCCCCcCCcc---c
Confidence 34455678999999996 999999999999999999763 578999999999999999999655 9997 997 7
Q ss_pred cCcccc
Q psy5945 560 ISSHSC 565 (568)
Q Consensus 560 ~~~~~c 565 (568)
||..++
T Consensus 107 fP~~~~ 112 (126)
T cd07448 107 FPPQNN 112 (126)
T ss_pred CCCCCC
Confidence 887654
No 6
>cd07450 CRD_FZ6 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 6 (Fz6) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 6 (Fz6) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Frizzled 6 (Fz6) is expressed in the skin and hair follicles and controls hair patterning in mammals using a Fz-dependent tissue polarity system, which is similar to the one that patterns the Drosophila cuticle.
Probab=99.33 E-value=3.3e-13 Score=124.04 Aligned_cols=73 Identities=22% Similarity=0.618 Sum_probs=64.4
Q ss_pred ccchhHhHhhhhccccCcchhHHhHHhHhhccccCCCC-CccccccHHHHHHhcCccccccccc---CCcc-cccCCCcc
Q psy5945 486 VDVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCED-NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKI 560 (568)
Q Consensus 486 ~~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~-~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~ 560 (568)
.+++..++..|..|-++ .||+.|+.||||+|+|.|.. +++.+|||++|+.+|+.|..+|..+ ||++ +|+ +|
T Consensus 32 q~ea~~~~~~f~pLv~~-~Csp~l~~FLCS~~~P~C~~~~~~i~PCRslCe~vr~~C~~~m~~fg~~WP~~L~C~---~f 107 (127)
T cd07450 32 QDIAAVEMEPFLPLANL-RCSPNVHTFLCQAFVPTCTEQIHVVRPCRELCEKVYSDCKKLIDTFGISWPEELECD---RL 107 (127)
T ss_pred HHHHHHHHHHHHhHhcc-CCChhhhhheeeeecccccCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCCCcCCcc---cC
Confidence 35556788899999998 99999999999999999966 4788999999999999999999655 9998 997 67
Q ss_pred Cc
Q psy5945 561 SS 562 (568)
Q Consensus 561 ~~ 562 (568)
|.
T Consensus 108 P~ 109 (127)
T cd07450 108 QY 109 (127)
T ss_pred CC
Confidence 75
No 7
>cd07443 CRD_SFRP1 Cysteine-rich domain of the secreted frizzled-related protein 1 (SFRP1), a regulator of Wnt activity. The cysteine-rich domain (CRD) is an essential part of the secreted frizzled-related protein 1 (SFRP1), which regulates the activity of Wnt proteins, key players in a number of fundamental cellular processes such as embryogenesis and postnatal development. SFRPs antagonize the activation of Wnt signaling by binding to the CRDs domains of frizzled (Fz) proteins, thereby preventing Wnt proteins from binding to these receptors. SFRPs are also known to have functions unrelated to Wnt, as enhancers of procollagen cleavage by the TLD proteinases. SFRPs and Fz proteins both contain CRD domains, but SFRPs lack the seven-pass transmembrane domain which is an integral part of Fzs. SFRP1 is expressed in many tissues and is involved in the regulation of Wnt signaling in osteoblasts, leading to enhanced trabecular bone formation in adults; it has also been shown to control the gro
Probab=99.31 E-value=6.5e-13 Score=121.72 Aligned_cols=76 Identities=28% Similarity=0.580 Sum_probs=64.5
Q ss_pred ccchhHhHhhhhccccCcchhHHhHHhHhhccccCCCCCccccccHHHHHHhcCccccccccc---CCcc-cccCCCccC
Q psy5945 486 VDVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCEDNVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKIS 561 (568)
Q Consensus 486 ~~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~ 561 (568)
.+.+...+..|.+|-+ ..||+.|+.||||+|+|.|.. +..+|||++|+.+|+.|..+|..+ ||++ +|+ +||
T Consensus 36 q~ea~~~~~~~~pLv~-~~C~p~l~~FlCsl~~P~C~~-~~i~PCRslCe~vr~~C~~~m~~~g~~WP~~L~C~---~fP 110 (124)
T cd07443 36 MAEVKQQASSWVPLLN-KNCHKGTQVFLCSLFAPVCLD-RPVYPCRWLCEAVRDSCEPVMQFFGFYWPEMLKCD---KFP 110 (124)
T ss_pred HHHHHHHHHHHHHHHh-ccccHHHHHHhhheeccCCCC-CCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCCcc---cCC
Confidence 3445667889999987 899999999999999999985 556999999999999999999655 9998 997 566
Q ss_pred c-cccc
Q psy5945 562 S-HSCK 566 (568)
Q Consensus 562 ~-~~ck 566 (568)
. .+|-
T Consensus 111 ~~~~ci 116 (124)
T cd07443 111 EGEVCI 116 (124)
T ss_pred CCCCcc
Confidence 5 5563
No 8
>cd07449 CRD_FZ3 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 3 (Fz3) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 3 (Fz3) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Fz3 plays a vital role in the anterior-posterior guidance of commissural axons. Knockout mice without Fz3 show defects in fiber tracts in the rostral CNS.
Probab=99.29 E-value=9.9e-13 Score=120.94 Aligned_cols=73 Identities=22% Similarity=0.543 Sum_probs=64.5
Q ss_pred chhHhHhhhhccccCcchhHHhHHhHhhccccCCC-CCccccccHHHHHHhcCccccccccc---CCcc-cccCCCccCc
Q psy5945 488 VDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCE-DNVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKISS 562 (568)
Q Consensus 488 ~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~-~~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~~ 562 (568)
.+...++.|..|-++ .|++.|+.||||+|+|.|. .+++.+|||++|+.+|+.|..+|..+ ||++ +|+ +||.
T Consensus 34 ea~~~~~~f~pLv~~-~Csp~l~~FLCSly~P~C~~~~~~i~PCRslCe~vr~~C~~~m~~fg~~WP~~L~C~---~fP~ 109 (127)
T cd07449 34 TAALAMEPFHPMVNL-ECSRDFRPFLCALYAPVCMEYGRVTLPCRRLCQRAYSECSKLMEMFGVPWPEDMECS---RFPD 109 (127)
T ss_pred HHHHHHHhhcccccC-CcChhhHhHhheeeccccCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCcCCcc---cCCC
Confidence 345678899999997 9999999999999999994 57889999999999999999999755 9998 997 7887
Q ss_pred cc
Q psy5945 563 HS 564 (568)
Q Consensus 563 ~~ 564 (568)
.+
T Consensus 110 ~~ 111 (127)
T cd07449 110 CD 111 (127)
T ss_pred CC
Confidence 55
No 9
>cd07457 CRD_FZ9_like Cysteine-rich Wnt-binding domain (CRD) of receptors similar to frizzled 9. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 9 (Fz9) and frizzled 10 (Fz10) receptors, and similar proteins. This domain is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. Very little is known about the mechanism by which CRD domains interact with their ligands. The domain contains 10 conserved cysteines.
Probab=99.23 E-value=2.9e-12 Score=116.90 Aligned_cols=72 Identities=18% Similarity=0.534 Sum_probs=62.7
Q ss_pred chhHhHhhhhccccCcchhHHhHHhHhhccccCCCCC--ccccccHHHHHHhcCccccccccc---CCcc-cccCCCccC
Q psy5945 488 VDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCEDN--VVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKIS 561 (568)
Q Consensus 488 ~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~~--~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~ 561 (568)
.+...++.|..|-++ .|++.|+.||||+|+|.|..+ +..+|||++|+.+|+.|..++..+ ||++ +|+ .||
T Consensus 32 ea~~~~~~~~pLv~~-~Csp~l~~FlCsl~~P~C~~~~~~~i~PCRslCe~vr~~C~~~m~~~g~~WP~~l~C~---~fP 107 (121)
T cd07457 32 EAAISIHEFAPLVQY-GCAEHLRFFLCSLYAPMCTEQVSIPIPACRSMCEQARDKCSPIMEQFSFSWPDSLDCD---RLP 107 (121)
T ss_pred HHHHHHHHHHHHHhc-CCChhHHHHhhhccCcccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCCcCCcc---cCC
Confidence 345678999999887 999999999999999999763 577899999999999999999655 9987 997 677
Q ss_pred cc
Q psy5945 562 SH 563 (568)
Q Consensus 562 ~~ 563 (568)
..
T Consensus 108 ~~ 109 (121)
T cd07457 108 RK 109 (121)
T ss_pred CC
Confidence 64
No 10
>cd07447 CRD_Carboxypeptidase_Z Cysteine-rich domain of carboxypeptidase Z, a member of the carboxypeptidase E family. The cysteine-rich-domain (CRD) is an essential part of carboxypeptidase Z, a member of the carboxypeptidase E family of metallocarboxypeptidases. This is a group of Zn-dependent enzymes implicated in the intra- and extracellular processing of proteins. Carboxypeptidase Z removes C-terminal basic amino acid residues from its substrates, particularly arginine. The CRD acts as a ligand-binding domain for Wnts involved in developmental processes. CPZ binds and may process Wnt-4, CPZ has also been found to enhance the induction of the homeobox gene Cdx1. During vertebrate embryogenesis, the CRD of CPZ upregulates Pax3, a Wnt reporter gene essential for patterning of somites and limb development.
Probab=99.23 E-value=3.7e-12 Score=117.32 Aligned_cols=66 Identities=26% Similarity=0.572 Sum_probs=57.1
Q ss_pred HhhhhccccCcchhHHhHHhHhhccccCCCCCccccccHHHHHHhcCccccccccc---CCcc-cccCCCccCc
Q psy5945 493 LKRWQGLKYIPKCWAVIQSFLCALYMPKCEDNVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKISS 562 (568)
Q Consensus 493 l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~~ 562 (568)
|+.|..|-+ ..|++.|+.||||+|+|.|..+++.+|||++|+.+|+.|..+|..+ ||++ +|+ .||.
T Consensus 43 l~~f~pLv~-~~C~p~l~~FLCSl~~P~C~~~~~i~PCRslCe~vr~~C~~~m~~fg~~WP~~L~C~---~fP~ 112 (128)
T cd07447 43 LSVLHGLLG-GECNPDIRLLGCSVLAPRCENDKVIKPCRSTCEALRKRCSHAFDAIQMAWPYFLDCD---RFFA 112 (128)
T ss_pred HHHHhhhhh-cCcChhHHhHhhcccccccCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCCCcCccc---cCCC
Confidence 445555544 7999999999999999999989999999999999999999999654 9998 998 6664
No 11
>cd07445 CRD_corin_1 One of two cysteine-rich domains of the corin protein, a type II transmembrane serine protease . The cysteine-rich domain (CRD) is an essential component of corin, a type II transmembrane serine protease which functions as the convertase of the pro-atrial natriuretic peptide (pro-ANP) in the heart. Corin contains two CRDs in its extracellular region, which play an important role in recognition of the physiological substrate, pro-ANP. This model characterizes the first (N-terminal) CRD.
Probab=99.18 E-value=8.4e-12 Score=115.19 Aligned_cols=71 Identities=24% Similarity=0.506 Sum_probs=61.6
Q ss_pred chhHhHhhhhccccCcchhHHhHHhHhhccccCCCCC----ccccccHHHHHHhcCccccccccc---CCcc-cccCCCc
Q psy5945 488 VDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCEDN----VVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTK 559 (568)
Q Consensus 488 ~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~~----~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~ 559 (568)
.++..|..|..|-++ .|.+.|+.||||+|+|.|..+ ++.+|||++|+.+|..|..+|..+ ||++ +|+ +
T Consensus 33 ea~~~l~~f~pLv~~-~Csp~l~~FLCSlyaP~C~~~~~~~~~i~PCRslCe~vr~~C~~~m~~fg~~WPe~L~C~---~ 108 (130)
T cd07445 33 EMEKFLKFFSYLHRL-SCYQHIMLFGCSLALPECISDGDDRHGLLPCRSFCEAAKEGCEPVLGMVNASWPDFLRCS---Q 108 (130)
T ss_pred HHHHHHHhhcccccc-CcChhhHHHhhhccCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCCCcCCcc---c
Confidence 445578899999998 899999999999999999653 578899999999999999999755 9998 997 5
Q ss_pred cCc
Q psy5945 560 ISS 562 (568)
Q Consensus 560 ~~~ 562 (568)
||.
T Consensus 109 fP~ 111 (130)
T cd07445 109 FRN 111 (130)
T ss_pred cCC
Confidence 654
No 12
>cd07458 CRD_FZ1_like Cysteine-rich Wnt-binding domain (CRD) of receptors similar to frizzled 1. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 1 (Fz1), frizzled 2 (Fz2), and frizzled 7 (Fz7) receptors, and similar proteins. This domain is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. Very little is known about the mechanism by which CRD domains interact with their ligands. The domain contains 10 conserved cysteines.
Probab=99.14 E-value=1.5e-11 Score=111.99 Aligned_cols=71 Identities=24% Similarity=0.562 Sum_probs=62.8
Q ss_pred hhHhHhhhhccccCcchhHHhHHhHhhccccCCCC-CccccccHHHHHHhcCccccccccc---CCcc-cccCCCccCcc
Q psy5945 489 DGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCED-NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKISSH 563 (568)
Q Consensus 489 ~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~-~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~~~ 563 (568)
+...|+.|..|-+ -.|++.|+.||||+|+|.|.. +++.+|||++|+.+|+.|..+|..+ ||++ +|+ .||..
T Consensus 33 a~~~l~~~~pLv~-~~C~p~l~~FlCsl~~P~C~~~~~~i~PCRslCe~vr~~C~~~m~~~g~~WP~~l~C~---~fP~~ 108 (119)
T cd07458 33 AGLEVHQFYPLVK-VQCSPDLKFFLCSVYAPVCTVLERPIPPCRSLCESARQGCEALMNKFGFQWPESLDCE---KFPVH 108 (119)
T ss_pred HHHHHHHHHHHHh-CCCChhHHHHhhhccccccCCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCCCCCcc---cCCCC
Confidence 4457999999977 789999999999999999976 7889999999999999999999754 9998 997 67764
No 13
>cd07452 CRD_sizzled Cysteine-rich domain of the sizzled protein. The cysteine-rich domain (CRD) is an essential part of the sizzled protein, which regulates bone morphogenetic protein (Bmp) signaling by stabilizing chordin, and plays a critical role in the patterning of vertebrate and invertebrate embryos. Sizzled also functions in the ventral region as a Wnt inhibitor and modulates canonical Wnt signaling. Sizzled proteins belong to the secreted frizzled-related protein family (SFRP), and have be identified in the genomes of birds, fishes and frogs, but not mammals.
Probab=99.13 E-value=1.9e-11 Score=114.29 Aligned_cols=72 Identities=25% Similarity=0.535 Sum_probs=62.3
Q ss_pred cchhHhHhhhhccccCcchhHHhHHhHhhccccCCCCCccccccHHHHHHhcCccccccccc---CCcc-cccCCCccCc
Q psy5945 487 DVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCEDNVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKISS 562 (568)
Q Consensus 487 ~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~~ 562 (568)
+.+...+..|..|-+ ..|++.|+.||||+|+|.|.. +..+|||++|+.+|..|..+|..+ ||++ +|+ .||.
T Consensus 39 ~ea~~~~~~f~pLv~-~~C~p~l~~FlCSl~~P~C~~-~~i~PCRslCe~vr~~C~~~m~~fg~~WP~~L~C~---~fP~ 113 (141)
T cd07452 39 AEVVPKSADWQTLLH-TGCHPHARTFLCSLFAPVCLD-TFIQPCRSMCVAVRDSCAPVLACHGHSWPESLDCD---RFPA 113 (141)
T ss_pred HHHHHHHHHHHHHHh-cCCCHHHHHHhHhhcccCCCC-CCCcCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcc---cCCC
Confidence 344567888999988 899999999999999999986 566899999999999999999644 9997 997 6775
Q ss_pred c
Q psy5945 563 H 563 (568)
Q Consensus 563 ~ 563 (568)
.
T Consensus 114 ~ 114 (141)
T cd07452 114 G 114 (141)
T ss_pred C
Confidence 3
No 14
>cd07444 CRD_SFRP5 Cysteine-rich domain of the secreted frizzled-related protein 5 (SFRP5), a regulator of Wnt activity. The cysteine-rich domain (CRD) is an essential part of the secreted frizzled-related Protein 5 (SFRP5), which regulates the activity of Wnt proteins, key players in a number of fundamental cellular processes such as embryogenesis and postnatal development. SFRPs antagonize the activation of Wnt signaling by binding to the CRD domains of frizzled (Fz) proteins, thereby preventing Wnt proteins from binding to these receptors. SFRPs are also known to have functions unrelated to Wnt, as enhancers of procollagen cleavage by the TLD proteinases. SFRPs and Fz proteins both contain CRD domains, but SFRPs lack the seven-pass transmembrane domain which is an integral part of Fzs.
Probab=99.11 E-value=2.6e-11 Score=111.67 Aligned_cols=77 Identities=27% Similarity=0.588 Sum_probs=65.0
Q ss_pred ccchhHhHhhhhccccCcchhHHhHHhHhhccccCCCCCccccccHHHHHHhcCccccccccc---CCcc-cccCCCccC
Q psy5945 486 VDVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCEDNVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKIS 561 (568)
Q Consensus 486 ~~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~ 561 (568)
.+.+...+..|..|-+. .|++.|+.||||+|+|.|. ++..+|||++|+.+|+.|.-+|..+ ||++ +|+ +||
T Consensus 36 q~ea~~~~~~~~pLv~~-~C~p~l~~FlCSl~~P~C~-~~~i~PCRslCe~vr~~C~~~m~~~g~~WP~~l~C~---~fP 110 (127)
T cd07444 36 MAEVKQQASSWVPLLAK-RCHADTQVFLCSLFAPVCL-DRPIYPCRSLCEAVRDSCAPVMESYGFPWPEMLHCH---KFP 110 (127)
T ss_pred HHHHHHHHHHHHHHHhc-ccCHHHHHHhhhhcCCCCC-CCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCCChh---hCC
Confidence 44555678899999886 9999999999999999997 4678999999999999999999644 9998 997 787
Q ss_pred cc--cccc
Q psy5945 562 SH--SCKA 567 (568)
Q Consensus 562 ~~--~ck~ 567 (568)
.. .|-+
T Consensus 111 ~~~~~C~~ 118 (127)
T cd07444 111 LDNDLCIA 118 (127)
T ss_pred CCCCcccc
Confidence 53 3643
No 15
>cd07464 CRD_FZ2 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 2 (Fz2) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 2 (Fz2) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Fz2 is involved in the Wnt/beta-catenin signaling pathway and in the activation of protein kinase C and calcium/calmodulin-dependent protein kinase (CaM kinase).
Probab=99.10 E-value=2.9e-11 Score=111.30 Aligned_cols=73 Identities=22% Similarity=0.569 Sum_probs=64.0
Q ss_pred cchhHhHhhhhccccCcchhHHhHHhHhhccccCCCC-CccccccHHHHHHhcCccccccccc---CCcc-cccCCCccC
Q psy5945 487 DVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCED-NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKIS 561 (568)
Q Consensus 487 ~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~-~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~ 561 (568)
+.+...++.|..|-++ .|.+.|+.||||+|+|.|.. ++..+|||++|+.+|+.|.-+|..+ ||++ +|+ +||
T Consensus 33 ~ea~~~~~~f~pLv~~-~Csp~l~~FlCSl~~P~C~~~~~~i~PCRslCe~vr~~C~~~m~~fg~~WP~~l~C~---~fP 108 (127)
T cd07464 33 EDAGLEVHQFYPLVKV-QCSLELRFFLCSMYAPVCTVLEQAIPPCRSICERARQGCEALMNKFGFQWPERLRCE---NFP 108 (127)
T ss_pred HHHHHHHHHHHHHHhc-CCChhHHHHHhhccCCccCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCCCCcCCcc---cCC
Confidence 3445688999999886 99999999999999999976 6788899999999999999999755 9997 997 677
Q ss_pred cc
Q psy5945 562 SH 563 (568)
Q Consensus 562 ~~ 563 (568)
..
T Consensus 109 ~~ 110 (127)
T cd07464 109 RH 110 (127)
T ss_pred CC
Confidence 75
No 16
>cd07456 CRD_FZ5_like Cysteine-rich Wnt-binding domain (CRD) of receptors similar to frizzled 5. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 5 (Fz5) and frizzled 8 (Fz8) receptors, and similar proteins. This domain is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. Very little is known about the mechanism by which CRD domains interact with their ligands. The domain contains 10 conserved cysteines.
Probab=99.10 E-value=3.2e-11 Score=109.99 Aligned_cols=72 Identities=24% Similarity=0.540 Sum_probs=62.5
Q ss_pred chhHhHhhhhccccCcchhHHhHHhHhhccccCCCC--CccccccHHHHHHhcCccccccccc---CCcc-cccCCCccC
Q psy5945 488 VDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCED--NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKIS 561 (568)
Q Consensus 488 ~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~--~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~ 561 (568)
.+...+..|..|-++ .|++.|+.||||+|+|.|.. ++..+|||++|+.+|+.|..+|..+ ||++ +|+ .||
T Consensus 31 ea~~~~~~~~pLv~~-~Csp~l~~FlCsl~~P~C~~~~~~~i~PCRslCe~vr~~C~~~m~~~g~~WP~~l~C~---~fP 106 (120)
T cd07456 31 EAGLEVHQFWPLVEI-QCSPDLKFFLCSMYTPICLEDYDKPLPPCRSVCERARDGCAPIMRQYGFAWPERMSCD---ALP 106 (120)
T ss_pred HHHHHHHHHHHHHhC-CCChhHHHHhHhccCcccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCCcCChh---hCC
Confidence 345578889999887 99999999999999999976 4788999999999999999999754 9997 997 677
Q ss_pred cc
Q psy5945 562 SH 563 (568)
Q Consensus 562 ~~ 563 (568)
..
T Consensus 107 ~~ 108 (120)
T cd07456 107 EG 108 (120)
T ss_pred CC
Confidence 53
No 17
>cd07461 CRD_FZ8 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 8 (Fz8) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 8 (Fz8) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Xenopus Fz8 is important in Wnt/beta-catenin signaling pathways controlling the transcriptional activation of target genes Siamois and Xnr3 in the animal caps of late blastula.
Probab=99.07 E-value=4.7e-11 Score=109.65 Aligned_cols=72 Identities=22% Similarity=0.528 Sum_probs=63.2
Q ss_pred chhHhHhhhhccccCcchhHHhHHhHhhccccCCCC--CccccccHHHHHHhcCccccccccc---CCcc-cccCCCccC
Q psy5945 488 VDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCED--NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKIS 561 (568)
Q Consensus 488 ~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~--~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~ 561 (568)
.+...++.|..|-++ .|...|+.||||+|.|.|.. +++.+|||++|+.+|..|..+|..+ ||++ +|+ .||
T Consensus 34 ea~~~~~~f~pLv~~-~Csp~l~~FlCSl~~P~C~~~~~~~i~PCRslCe~vr~~C~~~m~~~g~~WP~~l~C~---~fP 109 (125)
T cd07461 34 EAGLEVHQFWPLVEI-QCSPDLKFFLCSMYTPICLEDYKKPLPPCRSVCERAKAGCAPLMRQYGFPWPDRMRCD---LLP 109 (125)
T ss_pred HHHHHHHHHHHHHhC-CCChhHHHHhhhccCcccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCCcCChh---hCC
Confidence 345677899999998 99999999999999999965 4788999999999999999999754 9998 997 777
Q ss_pred cc
Q psy5945 562 SH 563 (568)
Q Consensus 562 ~~ 563 (568)
..
T Consensus 110 ~~ 111 (125)
T cd07461 110 EQ 111 (125)
T ss_pred CC
Confidence 64
No 18
>cd07460 CRD_FZ5 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 5 (Fz5) receptor.proteins. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 5 (Fz5) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Fz5 plays critical regulating roles in the yolk sac and placental angiogenesis, in the maturation of the Paneth cell phenotype, in governing the neural potential of progenitors in the developing retina, and in neuronal s
Probab=99.06 E-value=4.9e-11 Score=109.84 Aligned_cols=74 Identities=26% Similarity=0.535 Sum_probs=63.8
Q ss_pred ccchhHhHhhhhccccCcchhHHhHHhHhhccccCCCC--CccccccHHHHHHhcCccccccccc---CCcc-cccCCCc
Q psy5945 486 VDVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCED--NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTK 559 (568)
Q Consensus 486 ~~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~--~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~ 559 (568)
.|.+...++.|..|-++ .|.+.|+.||||+|.|.|.. +++.+|||++|+.+|+.|..+|..+ ||++ +|+ .
T Consensus 32 q~ea~~~~~~f~pLv~~-~Csp~l~~FlCS~~~P~C~~~~~~~i~PCRslCe~vr~~C~~~m~~fg~~WP~~l~C~---~ 107 (127)
T cd07460 32 QDEAGLEVHQFWPLVEI-QCSPDLRFFLCSMYTPICLPDYRKPLPPCRSVCERAKAGCSPLMRQYGFAWPERMNCD---R 107 (127)
T ss_pred HHHHHHHHHHHHHHHhC-CCChhHHHHhhhccCccccCCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCCcCChh---h
Confidence 34555678889999998 99999999999999999954 4778899999999999999999755 9997 997 6
Q ss_pred cCcc
Q psy5945 560 ISSH 563 (568)
Q Consensus 560 ~~~~ 563 (568)
||..
T Consensus 108 fP~~ 111 (127)
T cd07460 108 LPVL 111 (127)
T ss_pred CCCC
Confidence 7763
No 19
>cd07441 CRD_SFRP3 Cysteine-rich domain of the secreted frizzled-related protein 3 (SFRP3, alias FRZB), a Wnt antagonist. The cysteine-rich domain (CRD) is an essential part of the secreted frizzled-related protein 3 (SFRP3, alias FRZB), which plays important roles in embryogenesis and postnatal development as an antagonist of Wnt proteins, key players in a number of fundamental cellular processes. SFRPs antagonize the activation of Wnt signaling by binding to the CRD domains of frizzled proteins (Fz), thereby preventing Wnt proteins from binding to these receptors. SFRPs are also known to have functions unrelated to Wnt, as enhancers of procollagen cleavage by the TLD proteinases. SFRPs and Fz proteins both contain CRD domains, but SFRPs lack the seven-pass transmembrane domain which is an integral part of Fzs. SFRP3 regulates Wnt signaling activity in bone development and homeostasis. It is also involved in the control of planar cell polarity.
Probab=99.05 E-value=6.1e-11 Score=109.09 Aligned_cols=74 Identities=24% Similarity=0.459 Sum_probs=64.3
Q ss_pred ccchhHhHhhhhccccCcchhHHhHHhHhhccccCCCC---CccccccHHHHHHhcCccccccccc---CCcc-cccCCC
Q psy5945 486 VDVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCED---NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGT 558 (568)
Q Consensus 486 ~~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~---~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~ 558 (568)
.+.+...++.|..|-+ -.|.+.|+.||||+|+|.|.. +++.+|||++|+.+|+.|..+|..+ ||+. +|+
T Consensus 31 q~ea~~~~~~f~pLv~-~~Csp~l~~FLCS~~~P~C~~~~~~~~i~PCRslCe~vr~~C~~~m~~fg~~WP~~L~C~--- 106 (126)
T cd07441 31 QANAVLAIEQFEGLLG-TQCSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARAGCEPVLIRYRHTWPESLACE--- 106 (126)
T ss_pred HHHHHHHHHHHHHHhc-CCCCccchhHHhhccCcccCCCCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCCcCCcc---
Confidence 3445668899999987 689999999999999999965 5788999999999999999999765 9997 997
Q ss_pred ccCcc
Q psy5945 559 KISSH 563 (568)
Q Consensus 559 ~~~~~ 563 (568)
+||..
T Consensus 107 ~fP~~ 111 (126)
T cd07441 107 ELPVY 111 (126)
T ss_pred cCCCC
Confidence 78764
No 20
>cd07442 CRD_SFRP4 Cysteine-rich domain of the secreted frizzled-related protein 4 (SFRP4), a Wnt antagonist. The cysteine-rich domain (CRD) is an essential part of the secreted frizzled-related Protein 4 (SFRP4), which regulates the activity of Wnt proteins, key players in a number of fundamental cellular processes such as embryogenesis and postnatal development. SFRPs antagonize the activation of Wnt signaling by binding to the CRDs domains of frizzled (Fz) proteins, thereby preventing Wnt proteins from binding to these receptors. SFRPs are also known to have functions unrelated to Wnt, as enhancers of procollagen cleavage by the TLD proteinases. SFRPs and Fz proteins both contain CRD domains, but SFRPs lack the seven-pass transmembrane domain which is an integral part of Fzs.
Probab=99.04 E-value=7.8e-11 Score=108.50 Aligned_cols=74 Identities=23% Similarity=0.464 Sum_probs=63.8
Q ss_pred ccchhHhHhhhhccccCcchhHHhHHhHhhccccCCCC---CccccccHHHHHHhcCccccccccc---CCcc-cccCCC
Q psy5945 486 VDVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCED---NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGT 558 (568)
Q Consensus 486 ~~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~---~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~ 558 (568)
.+.+...++.|..|-+ -.|.+.|+.||||+|+|.|.. ++..+|||++|+.+|+.|..+|..+ ||+. +|+
T Consensus 32 q~ea~~~~~~f~pLv~-~~Csp~l~~FLCS~~~P~C~~~~~~~~i~PCRslCe~vr~~C~~~m~~fg~~WP~~L~C~--- 107 (127)
T cd07442 32 QENAVLAIEQYEELVD-TGCSPVLPFFLCAMYAPICTLEFLYDPIKPCRSVCQRARDGCEPIMRRYNHSWPESLACD--- 107 (127)
T ss_pred HHHHHHHHHHHHHHHc-CCCCcchHHHHHhhcCCccCCCCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCCcCCcc---
Confidence 3445568899999988 689999999999999999964 4678899999999999999999755 9997 997
Q ss_pred ccCcc
Q psy5945 559 KISSH 563 (568)
Q Consensus 559 ~~~~~ 563 (568)
+||..
T Consensus 108 ~fP~~ 112 (127)
T cd07442 108 DLPVY 112 (127)
T ss_pred cCCCC
Confidence 67763
No 21
>cd07466 CRD_FZ7 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 7 (Fz7) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 7 (Fz7) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Xenopus Fz7 is important in Wnt/beta-catenin signaling pathways controlling the transcriptional activation of target genes Siamois and Xnr3 in the animal caps of late blastula.
Probab=99.03 E-value=9.6e-11 Score=107.64 Aligned_cols=74 Identities=22% Similarity=0.529 Sum_probs=63.7
Q ss_pred ccchhHhHhhhhccccCcchhHHhHHhHhhccccCCCC-CccccccHHHHHHhcCccccccccc---CCcc-cccCCCcc
Q psy5945 486 VDVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCED-NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKI 560 (568)
Q Consensus 486 ~~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~-~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~ 560 (568)
.+.+...|+.|..|-+ -.|.+.|+.||||+|.|.|.. ++..+|||++|+.+|+.|.-+|..+ ||++ +|+ +|
T Consensus 32 q~ea~~~~~~f~pLv~-~~Csp~l~~FlCsl~~P~C~~~~~~i~PCRslCe~vr~~C~~~m~~fg~~WP~~l~C~---~f 107 (125)
T cd07466 32 QEDAGLEVHQFYPLVK-VQCSPELKFFLCSMYAPVCTVLEQAIPPCRSLCERARQGCEALMNKFGFQWPERLRCE---NF 107 (125)
T ss_pred HHHHHHHHHHHHHHHh-CCCChhHHHHhhhccCCccCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCCCCcCCcc---cC
Confidence 3445568899999977 689999999999999999965 6777899999999999999999755 9997 997 67
Q ss_pred Ccc
Q psy5945 561 SSH 563 (568)
Q Consensus 561 ~~~ 563 (568)
|..
T Consensus 108 P~~ 110 (125)
T cd07466 108 PVH 110 (125)
T ss_pred CCC
Confidence 764
No 22
>cd07463 CRD_FZ9 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 9 (Fz9) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 9 (Fz9) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Fz9 may play a signaling role in lymphoid development and maturation, particularly at points where B cells undergo self-renewal prior to further differentiation.
Probab=99.02 E-value=9.5e-11 Score=107.92 Aligned_cols=74 Identities=22% Similarity=0.539 Sum_probs=63.4
Q ss_pred cchhHhHhhhhccccCcchhHHhHHhHhhccccCCCC--CccccccHHHHHHhcCccccccccc---CCcc-cccCCCcc
Q psy5945 487 DVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCED--NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKI 560 (568)
Q Consensus 487 ~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~--~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~ 560 (568)
+.+...++.|..|-+ -.|...|+.||||+|+|.|.. ++..+|||++|+.+|+.|.-+|..+ ||++ +|+ +|
T Consensus 33 ~ea~~~~~~f~pLv~-~~Csp~l~~FlCS~~~P~C~~~~~~~i~PCRslCe~vr~~C~~~m~~fg~~WP~~l~C~---~f 108 (127)
T cd07463 33 REAAIKLNEFAPLVE-YGCHVHLRFFLCSLYAPMCTDQVSTSIPACRPMCEQARQKCSPIMEQFNFGWPESLDCS---RL 108 (127)
T ss_pred HHHHHHHHHHHHHHh-cCCChhhHHHhhhccccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCCcCChh---hC
Confidence 344567888999988 689999999999999999965 3677799999999999999999755 9997 997 78
Q ss_pred Cccc
Q psy5945 561 SSHS 564 (568)
Q Consensus 561 ~~~~ 564 (568)
|..+
T Consensus 109 P~~~ 112 (127)
T cd07463 109 PTRN 112 (127)
T ss_pred CCCC
Confidence 8653
No 23
>cd07462 CRD_FZ10 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 10 (Fz10) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 10 (Fz10) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. The cellular functon of Fz10 is unknown.
Probab=99.02 E-value=1.1e-10 Score=107.62 Aligned_cols=71 Identities=21% Similarity=0.526 Sum_probs=61.6
Q ss_pred hhHhHhhhhccccCcchhHHhHHhHhhccccCCCC--CccccccHHHHHHhcCccccccccc---CCcc-cccCCCccCc
Q psy5945 489 DGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCED--NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKISS 562 (568)
Q Consensus 489 ~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~--~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~~ 562 (568)
+...|+.|..|-+ -.|...|+.||||+|+|.|.. ++..+|||++|+.+|+.|.-+|..+ ||++ +|+ .||.
T Consensus 35 a~~~~~~f~pLv~-~~C~p~l~~FlCsl~~P~C~~~~~~~i~PCRslCe~vr~~C~~~m~~~g~~WP~~l~C~---~fP~ 110 (127)
T cd07462 35 AAIQLHEFAPLVE-YGCHSHLKFFLCSLYAPMCTEQVSTPIPACRVMCEQARLKCSPIMEQFNFKWPDSLDCS---KLPN 110 (127)
T ss_pred HHHHHHHHHHHhc-cCCChhhHHHHHhccccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCCcCCcc---cCCC
Confidence 3457889999988 689999999999999999965 4677799999999999999999754 9998 997 7876
Q ss_pred c
Q psy5945 563 H 563 (568)
Q Consensus 563 ~ 563 (568)
.
T Consensus 111 ~ 111 (127)
T cd07462 111 K 111 (127)
T ss_pred C
Confidence 4
No 24
>cd07465 CRD_FZ1 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 1 (Fz1) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 1 (Fz1) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata.
Probab=99.02 E-value=1e-10 Score=107.77 Aligned_cols=73 Identities=23% Similarity=0.563 Sum_probs=63.6
Q ss_pred cchhHhHhhhhccccCcchhHHhHHhHhhccccCCCC-CccccccHHHHHHhcCccccccccc---CCcc-cccCCCccC
Q psy5945 487 DVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCED-NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKIS 561 (568)
Q Consensus 487 ~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~-~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~ 561 (568)
+.+...|+.|..|-+ -.|.+.|+.||||+|+|.|.. ++..+|||++|+.+|+.|.-+|..+ ||++ +|+ +||
T Consensus 33 ~ea~~~~~~f~pLv~-~~Csp~l~~FLCSl~~P~C~~~~~~i~PCRslCe~vr~~C~~~m~~fg~~WP~~l~C~---~fP 108 (127)
T cd07465 33 EDAGLEVHQFYPLVK-VQCSAELKFFLCSMYAPVCTVLEQALPPCRSLCERARQGCEALMNKFGFQWPDTLRCE---KFP 108 (127)
T ss_pred HHHHHHHHHHHHHHh-CCCChhhHhHhhhccCCcccCCCCcCCccHHHHHHHHHHHHHHHHHhCCCCCCcCCcc---cCC
Confidence 444568899999976 689999999999999999965 7888899999999999999999755 9998 997 677
Q ss_pred cc
Q psy5945 562 SH 563 (568)
Q Consensus 562 ~~ 563 (568)
..
T Consensus 109 ~~ 110 (127)
T cd07465 109 VH 110 (127)
T ss_pred CC
Confidence 64
No 25
>cd07454 CRD_LIN_17 Cysteine-rich domain (CRD) of LIN_17. A cysteine-rich domain (CRD) is an essential component of a number of cell surface receptors, which are involved in multiple signal transduction pathways, particularly in modulating the activity of the Wnt proteins, which play a fundamental role in the early development of metazoans. CRD is also found in secreted frizzled related proteins (SFRPs), which lack the transmembrane segment found in the frizzled protein. The CRD domain is also present in the alpha-1 chain of mouse type XVIII collagen, in carboxypeptidase Z, several receptor tyrosine kinases, and the mosaic transmembrane serine protease corin. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. CRD domains have also been identified in multiple tandem copies in a Dictyostelium discoideum protein. Very little is known about the mechanism by which CRD domains interact with the
Probab=98.99 E-value=1.7e-10 Score=105.88 Aligned_cols=71 Identities=23% Similarity=0.518 Sum_probs=61.2
Q ss_pred chhHhHhhhhccccCcchhHHhHHhHhhccccCCCC--CccccccHHHHHHhcCccccccccc---CCcc-cccCCCccC
Q psy5945 488 VDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCED--NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKIS 561 (568)
Q Consensus 488 ~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~--~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~ 561 (568)
.+...++.|..|-+ -.|.+.|+.||||+|+|.|.. .++.+|||++|+.+|+.|.-+|..+ ||++ +|+ +||
T Consensus 34 ea~~~~~~f~pLv~-~~C~p~l~~FlCsl~~P~C~~~~~~~i~PCRslCe~vr~~C~~~m~~fg~~WP~~l~C~---~fP 109 (124)
T cd07454 34 TLQTHTEHFKPLMK-TKCHPHIHFFICSVFAPMCPIGMPQAVTSCKSVCEQVKADCFSILEEFGIGWPEPLNCA---QFP 109 (124)
T ss_pred HHHHHHHHHHHHHh-cCCChhHHHHhhcccccccCCCCCCcCCCChhHHHHHHHHHHHHHHHhCCCCCCCCChh---hCC
Confidence 34456788999976 689999999999999999975 3678899999999999999999765 9998 997 677
Q ss_pred c
Q psy5945 562 S 562 (568)
Q Consensus 562 ~ 562 (568)
.
T Consensus 110 ~ 110 (124)
T cd07454 110 D 110 (124)
T ss_pred C
Confidence 5
No 26
>cd07446 CRD_SFRP2 Cysteine-rich domain of the secreted frizzled-related protein 2 (SFRP2), a regulator of Wnt activity. The cysteine-rich-domain (CRD) is an essential part of the secreted frizzled related protein 2 (SFRP2), which regulates the activity of Wnt proteins, key players in a number of fundamental cellular processes such as embryogenesis and postnatal development. SFRPs antagonize the activation of Wnt signaling by binding to CRD domains of frizzled (Fz) proteins, thereby preventing Wnt proteins from binding to these receptors. SFRPs and Fz proteins both contain CRD domains, but SFRPs lack the seven-pass transmembrane domain which is an integral part of Fzs. As a Wnt antagonist, SFRP2 regulates Nkx2.2 expression in the ventral spinal cord and anteroposterior axis elongation. SFRP2 also has a Wnt-independent function as an enhancer of procollagen cleavage by the TLD proteinases. SFRP2 binds both procollagen and TLD, thus facilitating the enzymatic reaction by bringing togeth
Probab=98.97 E-value=2.1e-10 Score=105.75 Aligned_cols=73 Identities=22% Similarity=0.566 Sum_probs=63.2
Q ss_pred ccchhHhHhhhhccccCcchhHHhHHhHhhccccCCCC--CccccccHHHHHHhcCccccccccc---CCcc-cccCCCc
Q psy5945 486 VDVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCED--NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTK 559 (568)
Q Consensus 486 ~~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~--~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~ 559 (568)
.+.+...+..|..|-+ -.|.+.|+.||||+|+|.|.. ++..+|||++|+.+|+.|.-+|..+ ||++ +|+ .
T Consensus 34 q~ea~~~~~~~~pLv~-~~C~p~l~~FlCSl~~P~C~~~~~~~i~PCRslCe~vr~~C~~~m~~~g~~WP~~l~C~---~ 109 (128)
T cd07446 34 MKEVLQQAGSWIPLVQ-KQCHPDTKKFLCSLFAPVCLDDLDEAIQPCRSLCEAVKDGCAPVMSAFGFPWPDMLDCT---R 109 (128)
T ss_pred HHHHHHHHHHHHHHHh-cCCChhhHHHhhhccCccccCCCCCcCCccHHHHHHHHHHHHHHHHHcCCCCCCCCCcc---c
Confidence 3445667888998876 799999999999999999975 5788999999999999999999655 9997 997 6
Q ss_pred cCc
Q psy5945 560 ISS 562 (568)
Q Consensus 560 ~~~ 562 (568)
||.
T Consensus 110 fP~ 112 (128)
T cd07446 110 FPL 112 (128)
T ss_pred CCC
Confidence 775
No 27
>cd07888 CRD_corin_2 One of two cysteine-rich domains of the corin protein, a type II transmembrane serine protease . The cysteine-rich domain (CRD) is an essential component of corin, a type II transmembrane serine protease which functions as the convertase of the pro-atrial natriuretic peptide (pro-ANP) in the heart. Corin contains two CRDs in its extracellular region, which play an important role in recognition of the physiological substrate, pro-ANP. This model characterizes the second (C-terminal) CRD.
Probab=98.95 E-value=3.1e-10 Score=103.84 Aligned_cols=67 Identities=21% Similarity=0.515 Sum_probs=58.5
Q ss_pred HhhhhccccCcchhHHhHHhHhhccccCCCC--CccccccHHHHHHhcCccccccccc---CCcc-cccCCCccCcc
Q psy5945 493 LKRWQGLKYIPKCWAVIQSFLCALYMPKCED--NVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKISSH 563 (568)
Q Consensus 493 l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~--~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~~~ 563 (568)
++.|..|-++ .|.+.|+.||||+|.|.|.. ++..+|||++|+.+|+.|.-+|..+ ||++ +|+ +||..
T Consensus 38 ~~~f~pLv~~-~Csp~l~~FlCsl~~P~C~~~~~~~i~PCRslCe~vr~~C~~~m~~fg~~WP~~l~C~---~fP~~ 110 (122)
T cd07888 38 SSLFPALVQT-NCYKYLMFFACTILVPKCDPVTQQRIPPCRSLCRNSKERCESVLGIVGLQWPEDTDCA---QFPEE 110 (122)
T ss_pred HHHHHhHHhc-CCChhHHHHHHhccCccccCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCcCccc---cCCCC
Confidence 4577778776 99999999999999999963 5788899999999999999999755 9997 997 78875
No 28
>cd07453 CRD_crescent Cysteine-rich domain of the crescent protein. The cysteine-rich domain (CRD) is an essential part of the crescent protein, a member of the secreted frizzled-related protein (SFRP) family, which regulates convergent extension movements (CEMs) during gastrulation and neurulation. Xenopus laevis crescent efficiently forms inhibitory complexes with Wnt5a and Wnt11, but this effect is cancelled in the presence of another member of the SFRP family, Frzb1. A potential role for Crescent in head formation is to regulate a non-canonical Wnt pathway positively in the adjacent posterior mesoderm, and negatively in the overlying anterior neuroectoderm.
Probab=98.92 E-value=3.7e-10 Score=105.02 Aligned_cols=70 Identities=23% Similarity=0.512 Sum_probs=61.1
Q ss_pred chhHhHhhhhccccCcchhHHhHHhHhhccccCCCCCccccccHHHHHHhcCccccccccc---CCcc-cccCCCccCc
Q psy5945 488 VDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCEDNVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKISS 562 (568)
Q Consensus 488 ~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~~~ 562 (568)
.+...+..|..|-+ -.|.+.|+.||||+|+|.|. ++..+|||++|+.+|..|.-+|..+ ||++ +|+ .||.
T Consensus 34 ea~~~~~~~~pLv~-~~C~p~l~~FLCSl~~P~C~-~~~i~PCRslCe~vr~~C~~~m~~~g~~WP~~l~C~---~fP~ 107 (135)
T cd07453 34 EVIQQSSSWLPLLA-RECHPDARIFLCSLFAPICW-DRPIYPCRSLCEAVRSSCAPLMACYGYPWPEILHCD---KFPV 107 (135)
T ss_pred HHHHHHHHHHHHHh-cCCChhhHHHhhhhcCccCC-CCCCCccHHHHHHHHHHHHHHHHHhCCCCCCCCChh---hCCC
Confidence 34556788888875 68999999999999999998 8899999999999999999999654 9997 997 6774
No 29
>KOG3577|consensus
Probab=98.92 E-value=4.7e-10 Score=124.74 Aligned_cols=73 Identities=25% Similarity=0.581 Sum_probs=63.7
Q ss_pred cchhHhHhhhhccccCcchhHHhHHhHhhccccCCC--CCccccccHHHHHHhcCccccccccc---CCcc-cccCCCcc
Q psy5945 487 DVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCE--DNVVSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKI 560 (568)
Q Consensus 487 ~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~--~~~v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~ 560 (568)
+.++.+++.|.. ..-.+||+.||+||||+|+|.|. .+++.+|||++|+++|.+|+-+|+.+ ||++ +|+ +|
T Consensus 71 ~ea~~~~~~f~P-Lv~~~Cs~~l~~FLCS~y~P~C~~~~d~pi~PCRslCe~ar~~Ce~~m~~~gf~WPe~L~C~---~f 146 (556)
T KOG3577|consen 71 EEAGLKLHQFHP-LVALRCSPGLRFFLCSLYAPMCTEDLDRPILPCRSLCEAAREGCEPLMEMFGFPWPEFLRCD---KF 146 (556)
T ss_pred HHhhhcccccCC-ccccccchhhhhHhhcCCCCcCccccCcccCccHHHHHHHhcccHHHHHhcCCCCCccccCC---CC
Confidence 345667889999 66789999999999999999996 58999999999999999999888655 9999 997 77
Q ss_pred Ccc
Q psy5945 561 SSH 563 (568)
Q Consensus 561 ~~~ 563 (568)
|..
T Consensus 147 p~~ 149 (556)
T KOG3577|consen 147 PVP 149 (556)
T ss_pred CCC
Confidence 765
No 30
>cd07455 CRD_Collagen_XVIII Cysteine-rich domain of the variant 3 of collagen XVIII (V3C18 ). The cysteine-rich domain (CRD) is an essential part of the variant 3 of collagen XVIII (V3C18), which regulates major cellular functions such as the differential epithelial morphogenesis of early lung and kidney development. V3C18 is a 170 kD protein, which is proteolotically processed into the CRD-containing 50 kD glucoprotein precursor that binds Wnt3a through its CRD domain and suppresses the Wnt3a-induced stabilization of beta catenin. Full-length V3C18 is unable to inhibit Wnt signaling.
Probab=98.90 E-value=5.2e-10 Score=102.59 Aligned_cols=73 Identities=21% Similarity=0.518 Sum_probs=62.4
Q ss_pred cchhHhHhhhhccccCcchhHHhHHhHhhccccCCCCC--ccccccHHHHHHhcCccccccccc-CCcccccCCCccCcc
Q psy5945 487 DVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCEDN--VVSVPSQEVCKLLSGPCRIVAQEL-SPEFNCQNGTKISSH 563 (568)
Q Consensus 487 ~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~~--~v~lp~~~mC~~~~~~C~~l~~~~-~P~~~c~~~~~~~~~ 563 (568)
+.+...++.|..|-+ -.|...|+.||||+|+|.|..+ +..+|||++|+.+|..|.-+|.++ || ++|+ +||..
T Consensus 35 ~ea~~~~~~f~pLv~-~~Csp~l~~FlCs~~~P~C~~~~~~~i~PCRslCe~vr~~C~~~m~~fg~p-l~C~---~fP~~ 109 (123)
T cd07455 35 EEVRAVLAEWAWLLE-SGCHPSLEWFFCLLLVPSCGGGPPPPPPPCRQFCEVLQDSCWNLLEGGRLP-VACA---SLPEQ 109 (123)
T ss_pred HHHHHHHHHHHHHHh-CCCChhhHHHhhhccCCcccCCCCCcCCccHHHHHHHHHHHHHHHHccCCC-ChHH---HCCCC
Confidence 344557899999988 7999999999999999999764 348899999999999999999877 78 8997 77764
Q ss_pred c
Q psy5945 564 S 564 (568)
Q Consensus 564 ~ 564 (568)
+
T Consensus 110 ~ 110 (123)
T cd07455 110 E 110 (123)
T ss_pred C
Confidence 3
No 31
>PF01392 Fz: Fz domain; InterPro: IPR020067 The frizzled (fz) domain is an extracellular domain of about 120 amino acids.It was first identified in the alpha-1 chain of type XVIII collagen and in members of the Frizzled family of seven transmembrane (7TM) proteins which act as receptors for secreted Wingless (Wg)/Wnt glycoproteins []. In addition to these proteins, one or two copies of the fz domain are also found [, , , , ] in: The frizbee (Frzb) family; secreted frizzled-like proteins. Smoothened; another 7TM receptor involved in hedgehog signaling. Carboxpeptidase Z (CPZ). Transmembrane serine protease corin. Two receptor tyrosine kinases (RTKs) subfamilies, the Ror family and the muscle-specific kinase (MuSK) family. As the fz domain contains 10 cysteines which are largely conserved, it has also been called cysteine-rich domain (CRD) []. The fz domain also contains several other highly conserved residues, for example, a basic amino acid follows C6, and a conserved proline residues lies four residues C-terminal to C9 []. The crystal structure of a fz domain shows that it is predominantly alpha-helical with all cysteines forming disulphide bonds. In addition to helical regions, two short beta-strands at the N terminus form a minimal beta-sheet with the second beta sheet passing through a knot created by disulphide bonds []. Several fz domains have been shown to be both necessary and sufficient for Wg/Wnt ligand binding, strongly suggesting that the fz domain is a Wg/Wnt interacting domain [, ].; GO: 0005515 protein binding; PDB: 1IJX_E 3HKL_B 1IJY_B 4F0A_A.
Probab=98.70 E-value=4.9e-09 Score=91.70 Aligned_cols=72 Identities=24% Similarity=0.626 Sum_probs=56.7
Q ss_pred cchhHhHhhhhccccCcchhHHhHHhHhhccccCCCCCcc---ccccHHHHHHhcCcccccccc---cCCcc-cccCCCc
Q psy5945 487 DVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCEDNVV---SVPSQEVCKLLSGPCRIVAQE---LSPEF-NCQNGTK 559 (568)
Q Consensus 487 ~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~~~v---~lp~~~mC~~~~~~C~~l~~~---~~P~~-~c~~~~~ 559 (568)
+.+...+..|..|.+. .|++.+++|||++|+|+|..+.- .+|||+.|+.+++.|...+.. .||.+ +|+ .
T Consensus 29 ~~~~~~~~~~~~l~~~-~C~~~~~~flC~~~~P~C~~~~~~~~~~pCr~~C~~v~~~C~~~~~~~~~~~~~~~~C~---~ 104 (116)
T PF01392_consen 29 DEASQQLNAFSTLVNS-GCHPYLRPFLCSLYFPPCDEGGPTPPLPPCRSLCEEVKSSCSPELENLGLGWPSFLDCS---N 104 (116)
T ss_dssp HHHHHHHHCCHHHHCC-TSHTTHHHHHHHHHS-BBBSSSSSSB-EB-HHHHHHHHHHHHHHHHHTTTTTSGGG-GG---G
T ss_pred HHHHHHHHHHHHHhcc-hhhHHHhhhhhcccCCcCCCCCcccccCCCHHHccccccccHHHHHHhcCCCCCCCCcc---c
Confidence 3445568899999988 99999999999999999966543 789999999999999999854 49987 998 4
Q ss_pred cCc
Q psy5945 560 ISS 562 (568)
Q Consensus 560 ~~~ 562 (568)
||.
T Consensus 105 lP~ 107 (116)
T PF01392_consen 105 LPE 107 (116)
T ss_dssp SS-
T ss_pred CCC
Confidence 555
No 32
>cd07066 CRD_FZ CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain. CRD_FZ is an essential component of a number of cell surface receptors, which are involved in multiple signal transduction pathways, particularly in modulating the activity of the Wnt proteins, which play a fundamental role in the early development of metazoans. CRD is also found in secreted frizzled related proteins (SFRPs), which lack the transmembrane segment found in the frizzled protein. The CRD domain is also present in the alpha-1 chain of mouse type XVIII collagen, in carboxypeptidase Z, several receptor tyrosine kinases, and the mosaic transmembrane serine protease corin. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. CRD domains have also been identified in multiple tandem copies in a Dictyostelium discoideum protein. Very little is known about the mechanism by which CRD domains interact wit
Probab=98.60 E-value=2.1e-08 Score=89.47 Aligned_cols=72 Identities=21% Similarity=0.552 Sum_probs=58.7
Q ss_pred cchhHhHhhhhccccCcchhHHhHHhHhhccccCCCCCc--cccccHHHHHHhcCccccccccc---CCcc-cccCCCcc
Q psy5945 487 DVDGERLKRWQGLKYIPKCWAVIQSFLCALYMPKCEDNV--VSVPSQEVCKLLSGPCRIVAQEL---SPEF-NCQNGTKI 560 (568)
Q Consensus 487 ~~~~~~l~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~~~--v~lp~~~mC~~~~~~C~~l~~~~---~P~~-~c~~~~~~ 560 (568)
+.++..+..|.. -....|++.++.|+|++|+|+|..+. ..+|||+.|+.++..|..++..+ ||.+ +|+ .|
T Consensus 30 ~~a~~~~~~~~~-l~~~~C~~~~~~f~Cs~~~P~C~~~~~~~~~PCRs~Ceev~~~C~~~~~~~~~~wp~~~~C~---~~ 105 (119)
T cd07066 30 EEAEQELESFTP-LVNSGCHPDLRFFLCSLYFPECTPDGDRPIPPCRSLCEEVRDSCEPLMLAFGFPWPEPLDCD---RF 105 (119)
T ss_pred HHHHHHHHHHHH-HHhcCCChhHHHHHHhccCccccCCCCCcCCChHHHHHHHHHHHHHHHHHhCCCCCCcCCcc---cc
Confidence 345556666663 34568999999999999999998876 89999999999999999998544 8998 998 45
Q ss_pred Cc
Q psy5945 561 SS 562 (568)
Q Consensus 561 ~~ 562 (568)
|.
T Consensus 106 p~ 107 (119)
T cd07066 106 PD 107 (119)
T ss_pred CC
Confidence 54
No 33
>KOG3922|consensus
Probab=96.56 E-value=0.0025 Score=66.82 Aligned_cols=22 Identities=32% Similarity=0.451 Sum_probs=20.1
Q ss_pred EEEEecCcchhHHHHHHHHHHh
Q psy5945 78 LLYCYVPKVACTNWKRIFLILV 99 (568)
Q Consensus 78 LIYC~IPKvAcTSWKrvL~~L~ 99 (568)
++|=.||||||||...++..|.
T Consensus 81 ViyNRVpKtGStTf~niaydL~ 102 (361)
T KOG3922|consen 81 VIYNRVPKTGSTTFVNIAYDLS 102 (361)
T ss_pred EEEecCCCccchhHHHHHHHHH
Confidence 5899999999999999888885
No 34
>PF06990 Gal-3-0_sulfotr: Galactose-3-O-sulfotransferase ; InterPro: IPR009729 This family consists of several mammalian galactose-3-O-sulphotransferase proteins. Gal-3-O-sulphotransferase is thought to play a critical role in 3'-sulphation of N-acetyllactosamine in both O- and N-glycans [].; GO: 0001733 galactosylceramide sulfotransferase activity, 0009058 biosynthetic process, 0005794 Golgi apparatus, 0016021 integral to membrane
Probab=94.30 E-value=0.087 Score=57.46 Aligned_cols=86 Identities=13% Similarity=0.252 Sum_probs=53.8
Q ss_pred ECCccEEEEecCcchhHHHHHHHHHHhCCC------CC------CCCCCCChhhhccc------ccCccccCCCHHHHHH
Q psy5945 73 DKKHKLLYCYVPKVACTNWKRIFLILVGQI------NT------TDPSSIPADVAHKL------TMNYKLSNFSKDEIHH 134 (568)
Q Consensus 73 sdkhKLIYC~IPKvAcTSWKrvL~~L~G~~------~~------~Dp~~Ip~~~vH~~------~~lk~Ls~ys~eei~~ 134 (568)
.++.+++|.-+-|+||||+..+|....-.. +. .-|..+....++.. +.+-.-..|..+++.+
T Consensus 64 ~P~~nIvFlKTHKTgSSTv~nIL~Rfg~~~nL~~alP~~~~~~~~~P~~f~~~~v~~~~~~~~~nIl~~H~rfn~~~~~~ 143 (402)
T PF06990_consen 64 QPKTNIVFLKTHKTGSSTVQNILFRFGEKHNLTFALPRGGRNQFGYPAPFNARFVEGYPPGGRFNILCHHMRFNRPEVRK 143 (402)
T ss_pred cccceEEEEecCCcccHHHHHHHHHHHHHcCCEEecCCCCCCCCCCCCcCCccccccCCCCCCceEEeehhccCHHHHHH
Confidence 456779999999999999999998763110 10 00111111111100 0111112466677777
Q ss_pred hhh-cceEEEEeeCCccccccccch
Q psy5945 135 FLE-SYTKFLFVRHPFERLVSAFHN 158 (568)
Q Consensus 135 ~Lk-~YfKF~FVRNPfERLVSAYrD 158 (568)
.+. +..-|+++|||.+++.|+|..
T Consensus 144 lmP~dt~yiTILRdP~~~feS~f~Y 168 (402)
T PF06990_consen 144 LMPPDTKYITILRDPVSHFESSFNY 168 (402)
T ss_pred hCCCCCeEEEEEcCHHHHHHhHHHH
Confidence 776 566799999999999999975
No 35
>PLN02164 sulfotransferase
Probab=91.28 E-value=0.64 Score=49.93 Aligned_cols=28 Identities=21% Similarity=0.379 Sum_probs=21.4
Q ss_pred EECCccEEEEecCcchhHHHHHHHHHHh
Q psy5945 72 VDKKHKLLYCYVPKVACTNWKRIFLILV 99 (568)
Q Consensus 72 VsdkhKLIYC~IPKvAcTSWKrvL~~L~ 99 (568)
--..--++-+.-||+|+|-++.++..+.
T Consensus 76 ~~r~~DV~laSyPKsGTTWlq~iv~~i~ 103 (346)
T PLN02164 76 QARPNDFLVCSYPKTGTTWLKALTFAIA 103 (346)
T ss_pred CCCCCCEEEEcCCCchhHHHHHHHHHHH
Confidence 3345567889999999988888877764
No 36
>cd07459 CRD_TK_ROR_like Cysteine-rich domain of tyrosine kinase-like orphan receptors. The cysteine-rich domain (CRD) is an essential part of the tyrosine kinase-like orphan receptor (Ror) proteins, a conserved family of tyrosine kinases that function in various processes, including neuronal and skeletal development, cell polarity, and cell movement. Ror proteins are receptors of Wnt proteins, which are key players in a number of fundamental cellular processes in embryogenesis and postnatal development. In different cellular contexts, Ror proteins can either activate or repress transcription of Wnt target genes, and can modulate Wnt signaling by sequestering Wnt ligands. In addition, a number of Wnt-independent functions have been proposed for both Ror1 and Ror2.
Probab=87.47 E-value=0.53 Score=44.07 Aligned_cols=53 Identities=23% Similarity=0.463 Sum_probs=41.9
Q ss_pred Hhhhhcccc-CcchhHHhHHhHhhccccCCCCCcc-ccc---cHHHHHHhcC-cccccc
Q psy5945 493 LKRWQGLKY-IPKCWAVIQSFLCALYMPKCEDNVV-SVP---SQEVCKLLSG-PCRIVA 545 (568)
Q Consensus 493 l~~~~~l~~-~p~Cw~~lq~~LCa~y~p~C~~~~v-~lp---~~~mC~~~~~-~C~~l~ 545 (568)
+..|..... -++|..+-.++||.-++|.|..+.. ..| ||+-|+++.. -|+.-.
T Consensus 39 ~~~i~~~~~ls~~C~~~a~~~lC~~~FP~C~~~~~~~~p~~iCre~C~~l~~~~C~~E~ 97 (135)
T cd07459 39 FTVISTSSDVSPKCQQYALPSLCYYAFPLCDEGSSTPKPRRICRDECELLENDLCKKEY 97 (135)
T ss_pred HHHHHhcccccHHHHHHHHHHHHHhhCCCCCCCCCCCCCCcccHHHHHHHHHhHhHHHH
Confidence 346666666 5899999999999999999976432 333 9999999998 997543
No 37
>KOG1584|consensus
Probab=78.99 E-value=9.8 Score=40.48 Aligned_cols=88 Identities=20% Similarity=0.182 Sum_probs=49.6
Q ss_pred ceEEEEeeCCccccccccchhhhhcCCCchhhHhHHHHHHHHhhcCCCCCcCCCCCCCCCHHHHHHHHHhcC-CCCCcCc
Q psy5945 139 YTKFLFVRHPFERLVSAFHNKLEQSYSSSKYFQSRFGKHIIKTIRTRPTNHSLNHGDDVTFNEFATFLTKNG-RGEEMNE 217 (568)
Q Consensus 139 YfKF~FVRNPfERLVSAYrDKf~~~~~~~~~f~~~~G~~IIkkyR~~a~~eal~~~~~vSFeEFV~yL~dt~-~~~~~D~ 217 (568)
-.-+-+.|||-+=+||.|+-- +... ......||++|++..+... .-...-.
T Consensus 125 cKvVYv~RNpKD~~VSy~hf~------------~~~~----------------~~~~~~~~e~~fe~F~~G~~~~Gp~~d 176 (297)
T KOG1584|consen 125 CKVVYVCRNPKDVLVSYYHFN------------RMLK----------------TQPGPGTFEEFFESFCNGVVPYGPWWD 176 (297)
T ss_pred CcEEEEecCccceeeeHHHHH------------hhhc----------------cCCCCCcHHHHHHHHhCCcCCcCChHH
Confidence 344567899999999999631 1100 0112235999998877321 1222334
Q ss_pred ccccccccccCCcceeeEEEecCCCCCCcccchHHHHHHH----HHHhCCCC
Q psy5945 218 HWRPVHHLCQPCKINYDFIGKEIPNYPRKHETLYEDANLL----LREIGVPQ 265 (568)
Q Consensus 218 HW~Pq~~LC~PC~I~YDFIGK~~~~~~~~lETLeeD~~~V----L~~LGlp~ 265 (568)
|-..+..+=+|-++-| .+ ||.|.+|.... .+=||.+-
T Consensus 177 HVl~~W~~~~~~~VLF---l~--------YEdmk~dp~~~ikrlaeFLg~~~ 217 (297)
T KOG1584|consen 177 HVLGYWELEDPKNVLF---LK--------YEDMKADPKGEIKKLAEFLGCPF 217 (297)
T ss_pred HHHHHHHhcCCCceEE---EE--------HHHhhhCHHHHHHHHHHHhCCCC
Confidence 6555555444544332 56 88888876554 44455553
No 38
>PF12929 Mid1: Stretch-activated Ca2+-permeable channel component; InterPro: IPR024338 Mid1 is a yeast plasma membrane protein required for Ca2+ influx induced by the mating pheromone alpha-factor during the mating process [, , ]. The protein is composed of 548-amino-acid residues, contains four hydrophobic regions (H1, H2, H3 and H4) and two cysteine-rich regions (C1 and C2) at the C terminus. H1 appears to be a signal sequence necessary for the alpha-factor-induced delivery to the plasma membrane. The region from H1 to H3 is required for the localisation of Mid1 in the plasma and ER membranes. C1 and C2 are thought to be involved in oligomerisation via the formation of disulphide bonds. Trafficking of Mid1-GFP to the plasma membrane is dependent on the N-glycosylation of Mid1 and the transporter protein Sec12. This suggests that the trafficking of Mid1-GFP to the plasma membrane requires a Sec12-dependent pathway from the ER to the Golgi, and that Mid1 is recruited via a Sec6- and Sec7-independent pathway from the Golgi to the plasma membrane.
Probab=57.92 E-value=6.3 Score=43.80 Aligned_cols=52 Identities=21% Similarity=0.511 Sum_probs=44.8
Q ss_pred hhhhccccCcchhHHhHHhHhhccccCCCCC-------------------------------------------------
Q psy5945 494 KRWQGLKYIPKCWAVIQSFLCALYMPKCEDN------------------------------------------------- 524 (568)
Q Consensus 494 ~~~~~l~~~p~Cw~~lq~~LCa~y~p~C~~~------------------------------------------------- 524 (568)
..|+-+|.---|-+.-+-.||||-+|.|..-
T Consensus 292 ~~YSl~r~C~DC~~aYk~WLCaVtIPRC~d~~~~~~~~~~r~~~~~~~ng~~~~~~~~~~~~~~~sRN~~Id~~i~PgpY 371 (427)
T PF12929_consen 292 ARYSLARTCDDCARAYKNWLCAVTIPRCTDFSSTSPYLQPRNAGQPFPNGTSLPATLRNSRASNSSRNPFIDEVIKPGPY 371 (427)
T ss_pred ccccCCCCchHHHHHHhhcccEeecccccCCCCCCcccccccccCCCcCCcccccccccccccCCCCCcccccccCCCCc
Confidence 3689999999999999999999999999660
Q ss_pred ccccccHHHHHHhcCcccccc
Q psy5945 525 VVSVPSQEVCKLLSGPCRIVA 545 (568)
Q Consensus 525 ~v~lp~~~mC~~~~~~C~~l~ 545 (568)
+=.|||.+||..+.+.|+-.+
T Consensus 372 ~EiLPC~dlCy~vVrsCP~~l 392 (427)
T PF12929_consen 372 KEILPCIDLCYAVVRSCPADL 392 (427)
T ss_pred ceeccHHHHHHHHHhcCchhh
Confidence 223699999999999998665
No 39
>PF00685 Sulfotransfer_1: Sulfotransferase domain; InterPro: IPR000863 This family includes a range of sulphotransferase proteins including flavonyl 3-sulphotransferase, aryl sulphotransferase, alcohol sulphotransferase, oestrogen sulphotransferase and phenol-sulphating phenol sulphotransferase. These enzymes are responsible for the transfer of sulphate groups to specific compounds.; GO: 0008146 sulfotransferase activity; PDB: 3MGC_A 3MGB_A 3MG9_A 1G3M_B 1HY3_B 2QP4_A 3F3Y_C 1EFH_A 1OV4_A 1J99_A ....
Probab=50.08 E-value=5.8 Score=38.30 Aligned_cols=23 Identities=9% Similarity=0.096 Sum_probs=19.9
Q ss_pred cEEEEecCcchhHHHHHHHHHHh
Q psy5945 77 KLLYCYVPKVACTNWKRIFLILV 99 (568)
Q Consensus 77 KLIYC~IPKvAcTSWKrvL~~L~ 99 (568)
+++-+-.||+|+|-+..+|....
T Consensus 3 ~i~I~g~prSGTt~l~~lL~~h~ 25 (267)
T PF00685_consen 3 PIFIVGAPRSGTTWLRELLNSHP 25 (267)
T ss_dssp SEEEEESTTSSHHHHHHHHHHHH
T ss_pred CEEEECCCCCcHHHHHHHHHhCc
Confidence 57788999999999999998854
No 40
>cd07469 CRD_TK_ROR_related Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors. The cysteine-rich domain (CRD) is an essential part of the tyrosine kinase-like orphan receptor (Ror) proteins, a conserved family of tyrosine kinases that function in various processes, including neuronal and skeletal development, cell polarity, and cell movement. Ror proteins are receptors of Wnt proteins, which are key players in a number of fundamental cellular processes in embryogenesis and postnatal development. In different cellular contexts, Ror proteins can either activate or repress transcription of Wnt target genes, and can modulate Wnt signaling by sequestering Wnt ligands.
Probab=32.68 E-value=37 Score=32.86 Aligned_cols=54 Identities=26% Similarity=0.600 Sum_probs=40.7
Q ss_pred hhHhHhh--hhcc-ccC-cchhHHhHHhHhhccccCCCCCc---cccc-cHHHHHHhcCc-cc
Q psy5945 489 DGERLKR--WQGL-KYI-PKCWAVIQSFLCALYMPKCEDNV---VSVP-SQEVCKLLSGP-CR 542 (568)
Q Consensus 489 ~~~~l~~--~~~l-~~~-p~Cw~~lq~~LCa~y~p~C~~~~---v~lp-~~~mC~~~~~~-C~ 542 (568)
.+|+|.. |.-+ +.+ ++|-.+-.++||.-.+|.|..+. +-+| |+|-|.+++.. |.
T Consensus 35 ~~E~l~~~~~~e~~~~ls~~Cr~~A~~~LC~~aFP~C~~~~~~p~p~plCredC~a~~~~~C~ 97 (147)
T cd07469 35 LNEQLTTGLWEELIKTVSELCRPAAEKLLCNYAFPECHPSGVGPTPKPLCREDCLAVKELFCY 97 (147)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCCCCCCCCCCcCchhHHHHHHHHHHHhH
Confidence 4555554 7777 454 58999999999999999996643 2334 99999999865 54
No 41
>cd07467 CRD_TK_ROR1 Cysteine-rich domain of tyrosine kinase-like orphan receptor 1. The cysteine-rich domain (CRD) is an essential part of the tyrosine kinase-like orphan receptor 1 (Ror1), a conserved family of tyrosine kinases that function in various processes, including neuronal and skeletal development, cell polarity, and cell movement. Ror proteins are receptors of Wnt proteins, which are key players in a number of fundamental cellular processes in embryogenesis and postnatal development. In different cellular contexts, Ror proteins can either activate or repress transcription of Wnt target genes, and can modulate Wnt signaling by sequestering Wnt ligands. In addition, a number of Wnt-independent functions have been proposed for both Ror1 and Ror2.
Probab=31.42 E-value=36 Score=32.70 Aligned_cols=37 Identities=22% Similarity=0.513 Sum_probs=27.9
Q ss_pred cchhHHhHHhHhhccccCCCCCccccc----cHHHHHHhcC
Q psy5945 503 PKCWAVIQSFLCALYMPKCEDNVVSVP----SQEVCKLLSG 539 (568)
Q Consensus 503 p~Cw~~lq~~LCa~y~p~C~~~~v~lp----~~~mC~~~~~ 539 (568)
+.|-.+..|+||.-.+|.|.......+ ||+-|.++.+
T Consensus 52 ~~Cr~~A~~~LC~~~FP~C~~~~~~P~pr~iCreeC~~le~ 92 (142)
T cd07467 52 DKCSQFAIPSLCHYAFPYCDETSGMPKPRDLCRDECEILEN 92 (142)
T ss_pred HHHHHHHHHHHHHHhCCCCcccCCCCCcchHHHHHHHHHHH
Confidence 479999999999999999966433332 7777766653
No 42
>cd07468 CRD_TK_ROR2 Cysteine-rich domain of tyrosine kinase-like orphan receptor 2. The cysteine-rich domain (CRD) is an essential part of the tyrosine kinase-like orphan receptor (Ror2), a conserved family of tyrosine kinases that function in various processes, including neuronal and skeletal development, cell polarity, and cell movement. Ror proteins are receptors of Wnt proteins, which are key players in a number of fundamental cellular processes in embryogenesis and postnatal development. In different cellular contexts, Ror proteins can either activate or repress transcription of Wnt target genes, and can modulate Wnt signaling by sequestering Wnt ligands. In addition, a number of Wnt-independent functions have been proposed for both Ror1 and Ror2.
Probab=27.89 E-value=47 Score=31.91 Aligned_cols=37 Identities=19% Similarity=0.553 Sum_probs=27.8
Q ss_pred cchhHHhHHhHhhccccCCCCCccccc----cHHHHHHhcC
Q psy5945 503 PKCWAVIQSFLCALYMPKCEDNVVSVP----SQEVCKLLSG 539 (568)
Q Consensus 503 p~Cw~~lq~~LCa~y~p~C~~~~v~lp----~~~mC~~~~~ 539 (568)
+.|-.+..|+||.-.+|.|.......+ ||+-|+++.+
T Consensus 52 ~~Cr~~A~~~LC~~~Fp~C~~~~~~p~pr~iCreeC~~l~~ 92 (140)
T cd07468 52 DQCSQFAIPSFCHFVFPLCDDRSRTPKPRELCRDECEVLEN 92 (140)
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCCCcchHHHHHHHHHH
Confidence 579999999999999999966433332 6776666653
No 43
>PF10470 AKAP7_RIRII_bdg: PKA-RI-RII subunit binding domain of A-kinase anchor protein; InterPro: IPR019511 This entry represents the RI-RII subunit-binding domain found at the C-terminal of the cyclic AMP-dependent protein kinase A (PKA) anchor protein, AKAP7. This protein anchors PKA, for its role in regulating PKA-mediated gene transcription in both somatic cells and oocytes, by binding to its regulatory subunits, RI and RII, hence being known as a dual-specific AKAP []. The 25 crucial amino acids of RII-binding domains in general form structurally conserved amphipathic helices with unrelated sequences; hydrophobic amino acid residues form the backbone of the interaction and hydrogen bond- and salt-bridge-forming amino acid residues increase the affinity of the interaction []. The nuclear localisation signal-containing domain is found at the N terminus.
Probab=23.84 E-value=70 Score=26.54 Aligned_cols=22 Identities=45% Similarity=0.534 Sum_probs=18.9
Q ss_pred ChhHHhhhhhhhHHHHHHHHhh
Q psy5945 316 DLPEFLNESKSAVEDAVLEALD 337 (568)
Q Consensus 316 ~l~~~~~~~~~~~~~~~~~~~~ 337 (568)
|=.+.++-||.-||+|||.|+.
T Consensus 5 DdaeL~~lSKrlVenAVlkAvQ 26 (61)
T PF10470_consen 5 DDAELVRLSKRLVENAVLKAVQ 26 (61)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 3467889999999999999975
Done!