BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5946
(63 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157108533|ref|XP_001650271.1| 50S ribosomal protein L4 [Aedes aegypti]
gi|108884031|gb|EAT48256.1| AAEL000701-PA [Aedes aegypti]
Length = 279
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/42 (71%), Positives = 36/42 (85%)
Query: 2 SIVLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
S VLGL STLSIKL QDDLHIV+DL +P +DP+YL +LV+ER
Sbjct: 156 SRVLGLVSTLSIKLAQDDLHIVRDLDIPTEDPQYLRDLVQER 197
>gi|158297277|ref|XP_317543.4| AGAP007937-PA [Anopheles gambiae str. PEST]
gi|157015117|gb|EAA12669.4| AGAP007937-PA [Anopheles gambiae str. PEST]
Length = 224
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/40 (70%), Positives = 34/40 (85%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGL STLSIKL QDDLH+VK+L +P DDP+YL++LV R
Sbjct: 103 VLGLVSTLSIKLAQDDLHVVKNLEIPTDDPQYLQDLVAAR 142
>gi|312376204|gb|EFR23370.1| hypothetical protein AND_13049 [Anopheles darlingi]
Length = 490
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/40 (67%), Positives = 34/40 (85%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGL STLSIKL Q+DLH+V+DL +P +DP+YL +LV ER
Sbjct: 145 VLGLVSTLSIKLAQNDLHVVQDLEIPTEDPQYLRDLVSER 184
>gi|321468499|gb|EFX79483.1| hypothetical protein DAPPUDRAFT_52198 [Daphnia pulex]
Length = 258
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/38 (76%), Positives = 31/38 (81%)
Query: 6 GLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
GL STLS KL QDDLHIV+ L +P DDPKYLE LVEER
Sbjct: 138 GLRSTLSAKLAQDDLHIVESLDIPTDDPKYLEALVEER 175
>gi|170032333|ref|XP_001844036.1| mitochondrial 39S ribosomal protein L4 [Culex quinquefasciatus]
gi|167872322|gb|EDS35705.1| mitochondrial 39S ribosomal protein L4 [Culex quinquefasciatus]
Length = 278
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGL STLSIKL QDDLHIV L +P DDP++L +LV+ER
Sbjct: 157 VLGLVSTLSIKLAQDDLHIVDSLDIPTDDPQFLRDLVQER 196
>gi|380011885|ref|XP_003690024.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Apis
florea]
Length = 280
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 2 SIVLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
S V GLTSTLSIKL QDDL+I+KDL +P ++P Y+E L+EER
Sbjct: 157 SRVNGLTSTLSIKLAQDDLYIIKDLEIPSNEPSYIEKLIEER 198
>gi|395512585|ref|XP_003760516.1| PREDICTED: 39S ribosomal protein L4, mitochondrial [Sarcophilus
harrisii]
Length = 297
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 30/41 (73%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERC 44
VLGL L++KLMQDDLH+V L LP DPKYL +LV RC
Sbjct: 175 VLGLKVALTVKLMQDDLHVVDSLELPTSDPKYLSDLVRHRC 215
>gi|350403280|ref|XP_003486754.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Bombus
impatiens]
Length = 280
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 33/40 (82%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GLTSTLS+KL QDDL+IVKDL +P + P Y+E L+EER
Sbjct: 158 VAGLTSTLSVKLAQDDLYIVKDLEIPSNKPSYIEQLIEER 197
>gi|322796484|gb|EFZ18991.1| hypothetical protein SINV_11616 [Solenopsis invicta]
Length = 287
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GLTS LSIKL QDDLHI+ +L +P +P Y+E LVEER
Sbjct: 165 VAGLTSMLSIKLAQDDLHIIDELEIPTSEPSYVEQLVEER 204
>gi|307170893|gb|EFN63004.1| 39S ribosomal protein L4, mitochondrial [Camponotus floridanus]
Length = 285
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GLTSTLS+KL QDDLHIV +L +P +P Y+E L+E+R
Sbjct: 163 VAGLTSTLSVKLAQDDLHIVNELEIPTSEPSYIEQLIEKR 202
>gi|91094379|ref|XP_970941.1| PREDICTED: similar to mitochondrial 39S ribosomal protein L4
[Tribolium castaneum]
gi|270014913|gb|EFA11361.1| hypothetical protein TcasGA2_TC011518 [Tribolium castaneum]
Length = 274
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 6 GLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
GLT+TLSIKL QDDLH++ DL +P DDP ++E LV+ R
Sbjct: 154 GLTATLSIKLAQDDLHVITDLEIPTDDPNFVEELVKSR 191
>gi|332018616|gb|EGI59197.1| 39S ribosomal protein L4, mitochondrial [Acromyrmex echinatior]
Length = 286
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
+ GLT+TLS+KL QDDLHIV +L +P +P Y+E L+EER
Sbjct: 164 IAGLTATLSVKLAQDDLHIVDELEIPTSEPSYVEQLIEER 203
>gi|346472881|gb|AEO36285.1| hypothetical protein [Amblyomma maculatum]
Length = 309
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/40 (67%), Positives = 30/40 (75%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GLT+ LS+K QDDL IV L LP +D KYLENLVEER
Sbjct: 185 VQGLTTALSVKFAQDDLKIVDSLDLPTNDSKYLENLVEER 224
>gi|346466693|gb|AEO33191.1| hypothetical protein [Amblyomma maculatum]
Length = 293
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/40 (67%), Positives = 30/40 (75%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GLT+ LS+K QDDL IV L LP +D KYLENLVEER
Sbjct: 169 VQGLTTALSVKFAQDDLKIVDSLDLPTNDSKYLENLVEER 208
>gi|346465399|gb|AEO32544.1| hypothetical protein [Amblyomma maculatum]
Length = 294
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/40 (67%), Positives = 30/40 (75%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GLT+ LS+K QDDL IV L LP +D KYLENLVEER
Sbjct: 170 VQGLTTALSVKFAQDDLKIVDSLDLPTNDSKYLENLVEER 209
>gi|340728366|ref|XP_003402496.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Bombus
terrestris]
Length = 280
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GLTSTLS+KL QDDL+IV DL +P + P Y+E L+EER
Sbjct: 158 VAGLTSTLSVKLAQDDLYIVNDLEIPSNKPSYIEQLIEER 197
>gi|328720672|ref|XP_001945994.2| PREDICTED: 39S ribosomal protein L4, mitochondrial-like
[Acyrthosiphon pisum]
Length = 282
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GLTSTLS+KL+QDDLH+V +L +P DDP Y+ +LV+ R
Sbjct: 159 VYGLTSTLSVKLIQDDLHVVNNLDIPTDDPGYINDLVDSR 198
>gi|195114622|ref|XP_002001866.1| GI14673 [Drosophila mojavensis]
gi|193912441|gb|EDW11308.1| GI14673 [Drosophila mojavensis]
Length = 911
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V+GLTSTLS+KL QDDLHI++D+ +P D +++ +L++ER
Sbjct: 789 VMGLTSTLSVKLAQDDLHIIEDVEIPTKDAQFIRDLIQER 828
>gi|195386106|ref|XP_002051745.1| GJ17161 [Drosophila virilis]
gi|194148202|gb|EDW63900.1| GJ17161 [Drosophila virilis]
Length = 298
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 35/40 (87%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGLTSTLS+KL QDDLHI++++ +P D +++++L++ER
Sbjct: 176 VLGLTSTLSVKLAQDDLHIIENVEIPTRDAQFIKDLIQER 215
>gi|194759834|ref|XP_001962152.1| GF15323 [Drosophila ananassae]
gi|190615849|gb|EDV31373.1| GF15323 [Drosophila ananassae]
Length = 296
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 34/40 (85%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGLTSTLS+KL QDDLHI++++ +P D ++L++L+ ER
Sbjct: 174 VLGLTSTLSVKLAQDDLHIIENVDIPTKDGQFLKDLIAER 213
>gi|195034530|ref|XP_001988917.1| GH11428 [Drosophila grimshawi]
gi|193904917|gb|EDW03784.1| GH11428 [Drosophila grimshawi]
Length = 923
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 33/40 (82%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGLTSTLS+KL QDDLHI++++ LP D +++ +L+ ER
Sbjct: 801 VLGLTSTLSVKLAQDDLHIIENVELPTRDAQFIRDLIAER 840
>gi|357630814|gb|EHJ78691.1| ribosomal protein L4 [Danaus plexippus]
Length = 285
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 6 GLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
GLTSTLS K QDDLH+V+DL LP D+ +YL L+E+R
Sbjct: 168 GLTSTLSAKFAQDDLHVVRDLELPTDESEYLIELIEKR 205
>gi|442749073|gb|JAA66696.1| Putative mitochondrial/chloroplast ribosomal protein l4 [Ixodes
ricinus]
Length = 310
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL + LS+K QDDL IV L LP DDPK+L+NLV+ER
Sbjct: 187 VEGLITALSVKFAQDDLKIVDALELPSDDPKFLQNLVDER 226
>gi|195437861|ref|XP_002066858.1| GK24328 [Drosophila willistoni]
gi|194162943|gb|EDW77844.1| GK24328 [Drosophila willistoni]
Length = 296
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGLTSTLS+KL QDDLHI++ +P +P+++++L++ER
Sbjct: 174 VLGLTSTLSVKLAQDDLHIIESTDIPTTEPQFIKDLIDER 213
>gi|195579557|ref|XP_002079628.1| GD21919 [Drosophila simulans]
gi|194191637|gb|EDX05213.1| GD21919 [Drosophila simulans]
Length = 296
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 34/40 (85%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGLTSTLS+KL QDDLHI++++ +P D ++L++L+ ER
Sbjct: 174 VLGLTSTLSVKLAQDDLHIIENVDIPTGDAEFLKDLIAER 213
>gi|328787688|ref|XP_001120958.2| PREDICTED: 39S ribosomal protein L4, mitochondrial [Apis mellifera]
Length = 280
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GLTSTLS+KL QDDL+I+KDL +P ++ Y+E L+EER
Sbjct: 159 VNGLTSTLSVKLAQDDLYIIKDLEIPSNESSYIEKLIEER 198
>gi|334326371|ref|XP_001367717.2| PREDICTED: 39S ribosomal protein L4, mitochondrial-like
[Monodelphis domestica]
Length = 293
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 29/40 (72%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGL L++KLMQDDLHIV L LP DP+YL +LV R
Sbjct: 171 VLGLKVALTVKLMQDDLHIVDSLELPTSDPRYLLDLVRHR 210
>gi|195343148|ref|XP_002038160.1| GM17909 [Drosophila sechellia]
gi|194133010|gb|EDW54578.1| GM17909 [Drosophila sechellia]
Length = 296
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 34/40 (85%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGLTSTLS+KL QDDLHI++++ +P D ++L++L+ ER
Sbjct: 174 VLGLTSTLSVKLAQDDLHIIENVDIPTGDAEFLKDLIAER 213
>gi|289742297|gb|ADD19896.1| mitochondrial ribosomal protein L4 [Glossina morsitans morsitans]
Length = 301
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 34/40 (85%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V+GLT+TLS+KL QDDLHI+KD+ +P D ++L++L+ ER
Sbjct: 179 VMGLTATLSVKLAQDDLHIIKDVEIPSGDHQFLKDLIIER 218
>gi|17933744|ref|NP_524939.1| mitochondrial ribosomal protein L4 [Drosophila melanogaster]
gi|7298296|gb|AAF53526.1| mitochondrial ribosomal protein L4 [Drosophila melanogaster]
gi|16769472|gb|AAL28955.1| LD33485p [Drosophila melanogaster]
gi|220944276|gb|ACL84681.1| mRpL4-PA [synthetic construct]
gi|220954122|gb|ACL89604.1| mRpL4-PA [synthetic construct]
Length = 296
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 33/40 (82%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGLTSTLS+KL QDDLHI+ ++ +P D ++L++L+ ER
Sbjct: 174 VLGLTSTLSVKLAQDDLHIIDNVDIPTGDAEFLKDLIAER 213
>gi|87248365|gb|ABD36235.1| ribosomal protein L4 [Bombyx mori]
Length = 284
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/36 (69%), Positives = 30/36 (83%)
Query: 6 GLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVE 41
GLT+TLS KL QDDLHIVKDL LP D+ +YL +L+E
Sbjct: 165 GLTTTLSAKLAQDDLHIVKDLELPTDESQYLVDLIE 200
>gi|307214236|gb|EFN89342.1| 39S ribosomal protein L4, mitochondrial [Harpegnathos saltator]
Length = 285
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GLTS LS+KL QDDLHI+ +L +P + Y+E LVEER
Sbjct: 163 VAGLTSMLSVKLAQDDLHIINNLEIPTSECSYIEQLVEER 202
>gi|195475362|ref|XP_002089953.1| GE19365 [Drosophila yakuba]
gi|194176054|gb|EDW89665.1| GE19365 [Drosophila yakuba]
Length = 296
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 33/40 (82%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGLTSTLS+KL QDDLHI++++ +P D +L++L+ ER
Sbjct: 174 VLGLTSTLSVKLAQDDLHIIENVDIPTRDSDFLKDLIAER 213
>gi|125986720|ref|XP_001357123.1| GA19152 [Drosophila pseudoobscura pseudoobscura]
gi|195160102|ref|XP_002020915.1| GL14082 [Drosophila persimilis]
gi|54645450|gb|EAL34189.1| GA19152 [Drosophila pseudoobscura pseudoobscura]
gi|194117865|gb|EDW39908.1| GL14082 [Drosophila persimilis]
Length = 293
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 34/40 (85%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V+GLTSTLS+KL QDDLH+++++ +P D +++++L+ ER
Sbjct: 171 VMGLTSTLSVKLAQDDLHVIENVDIPTRDAQFIKDLIAER 210
>gi|354475149|ref|XP_003499792.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Cricetulus
griseus]
gi|344240104|gb|EGV96207.1| 39S ribosomal protein L4, mitochondrial [Cricetulus griseus]
Length = 294
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL + L++KLMQDDLHIV L LP DP+YL L + R
Sbjct: 172 LGLKAALTVKLMQDDLHIVDSLELPTADPQYLTELAQYR 210
>gi|194857837|ref|XP_001969044.1| GG24171 [Drosophila erecta]
gi|190660911|gb|EDV58103.1| GG24171 [Drosophila erecta]
Length = 296
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 33/40 (82%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGLTSTLS+KL QDDLHI++ + +P D ++L++L+ ER
Sbjct: 174 VLGLTSTLSVKLAQDDLHIIESVDIPTGDAEFLKDLIAER 213
>gi|427787899|gb|JAA59401.1| Putative mitochondrial ribosomal protein l4 [Rhipicephalus
pulchellus]
Length = 308
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 30/40 (75%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GLT+ LS+KL QDDL IV +L LP +D KYL LV+ER
Sbjct: 185 VQGLTTALSVKLAQDDLKIVDNLDLPTNDSKYLLKLVDER 224
>gi|443727243|gb|ELU14082.1| hypothetical protein CAPTEDRAFT_138537 [Capitella teleta]
gi|443731458|gb|ELU16577.1| hypothetical protein CAPTEDRAFT_182691 [Capitella teleta]
Length = 254
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGL + LS+K Q++LHIV L +P DP+YLE L+E R
Sbjct: 125 VLGLATALSVKYAQNNLHIVDSLEIPSSDPEYLEELIETR 164
>gi|149020530|gb|EDL78335.1| mitochondrial ribosomal protein L4 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 302
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KLMQDDLHIV L LP DP+YL L + R
Sbjct: 180 LGLKVALTVKLMQDDLHIVDSLELPTADPQYLTELAQYR 218
>gi|148693203|gb|EDL25150.1| mitochondrial ribosomal protein L4, isoform CRA_d [Mus musculus]
Length = 302
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KLMQDDLHIV L LP DP+YL L + R
Sbjct: 180 LGLKVALTVKLMQDDLHIVDSLELPTADPQYLTELAQYR 218
>gi|22478084|gb|AAH37064.1| Mrpl4 protein, partial [Mus musculus]
Length = 306
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KLMQDDLHIV L LP DP+YL L + R
Sbjct: 184 LGLKVALTVKLMQDDLHIVDSLELPTADPQYLTELAQYR 222
>gi|157816923|ref|NP_001102224.1| 39S ribosomal protein L4, mitochondrial [Rattus norvegicus]
gi|149020531|gb|EDL78336.1| mitochondrial ribosomal protein L4 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 294
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KLMQDDLHIV L LP DP+YL L + R
Sbjct: 172 LGLKVALTVKLMQDDLHIVDSLELPTADPQYLTELAQYR 210
>gi|119508437|ref|NP_075656.2| 39S ribosomal protein L4, mitochondrial [Mus musculus]
gi|81881827|sp|Q9DCU6.1|RM04_MOUSE RecName: Full=39S ribosomal protein L4, mitochondrial; Short=L4mt;
Short=MRP-L4
gi|12832465|dbj|BAB22118.1| unnamed protein product [Mus musculus]
gi|13559359|dbj|BAB40839.1| mitochondrial ribosomal protein L4 (L4mt) [Mus musculus]
gi|37572295|gb|AAH39983.2| Mitochondrial ribosomal protein L4 [Mus musculus]
gi|38511681|gb|AAH61095.1| Mitochondrial ribosomal protein L4 [Mus musculus]
gi|148693202|gb|EDL25149.1| mitochondrial ribosomal protein L4, isoform CRA_c [Mus musculus]
Length = 294
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KLMQDDLHIV L LP DP+YL L + R
Sbjct: 172 LGLKVALTVKLMQDDLHIVDSLELPTADPQYLTELAQYR 210
>gi|383865973|ref|XP_003708446.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Megachile
rotundata]
Length = 282
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GLT TLS+KL QDDL+I+ +L +P +D Y++ L+E R
Sbjct: 160 VAGLTCTLSVKLAQDDLYIINELEIPTNDSAYIKELIEAR 199
>gi|395851077|ref|XP_003798093.1| PREDICTED: 39S ribosomal protein L4, mitochondrial [Otolemur
garnettii]
Length = 295
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%)
Query: 6 GLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERC 44
GL L++KL QDDLHIV L LP DP+YL L RC
Sbjct: 174 GLKIALTVKLAQDDLHIVDSLELPTADPQYLTELARYRC 212
>gi|148693200|gb|EDL25147.1| mitochondrial ribosomal protein L4, isoform CRA_a [Mus musculus]
Length = 300
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KLMQDDLHIV L LP DP+YL L + R
Sbjct: 178 LGLKVALTVKLMQDDLHIVDSLELPTADPQYLTELAQYR 216
>gi|351700425|gb|EHB03344.1| 39S ribosomal protein L4, mitochondrial [Heterocephalus glaber]
Length = 296
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGL L++KL QDDLH+V L LP DP+YL L R
Sbjct: 173 VLGLKVALTVKLAQDDLHVVDSLELPTADPQYLMELARHR 212
>gi|7670462|dbj|BAA95082.1| unnamed protein product [Mus musculus]
Length = 184
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KLMQDDLHIV L LP DP+YL L + R
Sbjct: 61 ALGLKVALTVKLMQDDLHIVDSLELPTADPQYLTELAQYR 100
>gi|390478528|ref|XP_003735529.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L4,
mitochondrial [Callithrix jacchus]
Length = 317
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KL QDDLHIV L LP DP+YL +L R
Sbjct: 172 LGLKVALTVKLAQDDLHIVDSLELPTPDPQYLTDLARYR 210
>gi|402904327|ref|XP_003914998.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like, partial
[Papio anubis]
Length = 220
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 25/39 (64%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL LSIKL QDDLHI+ L LP DP+YL L R
Sbjct: 98 LGLKVALSIKLAQDDLHIMDSLELPTGDPQYLTELARYR 136
>gi|397476516|ref|XP_003809645.1| PREDICTED: 39S ribosomal protein L4, mitochondrial [Pan paniscus]
Length = 311
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGL L++KL QDDLHI+ L LP DP+YL L R
Sbjct: 171 VLGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYR 210
>gi|355755440|gb|EHH59187.1| hypothetical protein EGM_09241 [Macaca fascicularis]
Length = 296
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 25/39 (64%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL LSIKL QDDLHI+ L LP DP+YL L R
Sbjct: 174 LGLKVALSIKLAQDDLHIMDSLELPTRDPQYLTELARYR 212
>gi|355703125|gb|EHH29616.1| hypothetical protein EGK_10089 [Macaca mulatta]
Length = 296
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 25/39 (64%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL LSIKL QDDLHI+ L LP DP+YL L R
Sbjct: 174 LGLKVALSIKLAQDDLHIMDSLELPTRDPQYLTELARYR 212
>gi|242014210|ref|XP_002427784.1| mitochondrial 50S ribosomal protein L4, putative [Pediculus humanus
corporis]
gi|212512253|gb|EEB15046.1| mitochondrial 50S ribosomal protein L4, putative [Pediculus humanus
corporis]
Length = 286
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 32/40 (80%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
+ GLTSTLS KL Q+DLH+V ++ +P DD +Y+ +L++ER
Sbjct: 173 IHGLTSTLSAKLAQNDLHVVDNINIPTDDSQYMIDLMKER 212
>gi|348550164|ref|XP_003460902.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Cavia
porcellus]
Length = 296
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KL QDDLH+V L LP DP+YL L R
Sbjct: 174 LGLKVALTVKLAQDDLHVVDSLELPTSDPQYLTELAHYR 212
>gi|73986986|ref|XP_854013.1| PREDICTED: 39S ribosomal protein L4, mitochondrial [Canis lupus
familiaris]
Length = 294
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL L++KL QDDLHIV L LP DP+YL L R
Sbjct: 171 VQGLKVALTVKLAQDDLHIVDSLELPTSDPQYLTELARYR 210
>gi|301772042|ref|XP_002921423.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Ailuropoda
melanoleuca]
gi|281337408|gb|EFB12992.1| hypothetical protein PANDA_010325 [Ailuropoda melanoleuca]
Length = 294
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL L++KL QDDLHIV L LP DP+YL L R
Sbjct: 171 VQGLKVALTVKLAQDDLHIVDSLELPTSDPQYLTELARYR 210
>gi|426228959|ref|XP_004008562.1| PREDICTED: 39S ribosomal protein L4, mitochondrial [Ovis aries]
Length = 288
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL L++KL QDDLHIV L LP DP+YL L R
Sbjct: 165 VQGLKVALTVKLAQDDLHIVDSLELPTTDPQYLMELARHR 204
>gi|440891545|gb|ELR45161.1| 39S ribosomal protein L4, mitochondrial [Bos grunniens mutus]
Length = 294
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCSQVSLSARLGIRDLQYDD 62
V GL L++KL QDDLHIV L LP DP+YL L RC + S DL+++D
Sbjct: 171 VQGLKVALTVKLAQDDLHIVDSLELPTTDPQYLTELA--RCRRWGDSVLF--VDLEHED 225
>gi|403296178|ref|XP_003938995.1| PREDICTED: 39S ribosomal protein L4, mitochondrial [Saimiri
boliviensis boliviensis]
Length = 294
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENL 39
LGL L++KL QDDLHIV L LP DP+YL +L
Sbjct: 172 LGLKVALTVKLAQDDLHIVDSLELPTPDPQYLTDL 206
>gi|444525512|gb|ELV14059.1| 39S ribosomal protein L4, mitochondrial [Tupaia chinensis]
Length = 294
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL LS+KL QD+LHIV L LP DP+YL L R
Sbjct: 172 LGLKVALSVKLAQDNLHIVDSLELPTPDPQYLSELAHFR 210
>gi|297703540|ref|XP_002828694.1| PREDICTED: 39S ribosomal protein L4, mitochondrial [Pongo abelii]
Length = 311
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KL QDDLHI+ L LP DP+YL L R
Sbjct: 172 LGLKMALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYR 210
>gi|9956063|gb|AAG02005.1| similar to Homo sapiens CGI-28 protein mRNA with GenBank Accession
Number AF132962 [Homo sapiens]
Length = 211
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KL QDDLHI+ L LP DP+YL L R
Sbjct: 72 LGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYR 110
>gi|4680695|gb|AAD27737.1|AF132962_1 CGI-28 protein [Homo sapiens]
Length = 311
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KL QDDLHI+ L LP DP+YL L R
Sbjct: 172 LGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYR 210
>gi|82697333|ref|NP_001032527.1| 39S ribosomal protein L4, mitochondrial [Bos taurus]
gi|108864722|sp|Q32PI6.1|RM04_BOVIN RecName: Full=39S ribosomal protein L4, mitochondrial; Short=L4mt;
Short=MRP-L4
gi|81294225|gb|AAI08103.1| Mitochondrial ribosomal protein L4 [Bos taurus]
gi|296485803|tpg|DAA27918.1| TPA: 39S ribosomal protein L4, mitochondrial [Bos taurus]
Length = 294
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL L++KL QDDLHIV L LP DP+YL L R
Sbjct: 171 VQGLKVALTVKLAQDDLHIVDSLELPTTDPQYLMELARYR 210
>gi|22547136|ref|NP_057040.2| 39S ribosomal protein L4, mitochondrial isoform a [Homo sapiens]
gi|22547138|ref|NP_666499.1| 39S ribosomal protein L4, mitochondrial isoform a [Homo sapiens]
gi|74733471|sp|Q9BYD3.1|RM04_HUMAN RecName: Full=39S ribosomal protein L4, mitochondrial; Short=L4mt;
Short=MRP-L4
gi|13559361|dbj|BAB40840.1| mitochondrial ribosomal protein L4 (L4mt) [Homo sapiens]
gi|14602670|gb|AAH09858.1| Mitochondrial ribosomal protein L4 [Homo sapiens]
gi|119604489|gb|EAW84083.1| mitochondrial ribosomal protein L4, isoform CRA_a [Homo sapiens]
gi|119604490|gb|EAW84084.1| mitochondrial ribosomal protein L4, isoform CRA_a [Homo sapiens]
Length = 311
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KL QDDLHI+ L LP DP+YL L R
Sbjct: 172 LGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYR 210
>gi|332852922|ref|XP_001164062.2| PREDICTED: 39S ribosomal protein L4, mitochondrial isoform 5 [Pan
troglodytes]
gi|410206720|gb|JAA00579.1| mitochondrial ribosomal protein L4 [Pan troglodytes]
gi|410253658|gb|JAA14796.1| mitochondrial ribosomal protein L4 [Pan troglodytes]
gi|410305182|gb|JAA31191.1| mitochondrial ribosomal protein L4 [Pan troglodytes]
gi|410332115|gb|JAA35004.1| mitochondrial ribosomal protein L4 [Pan troglodytes]
Length = 311
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KL QDDLHI+ L LP DP+YL L R
Sbjct: 172 LGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYR 210
>gi|22547140|ref|NP_666500.1| 39S ribosomal protein L4, mitochondrial isoform b [Homo sapiens]
gi|12653925|gb|AAH00756.1| Mitochondrial ribosomal protein L4 [Homo sapiens]
gi|119604491|gb|EAW84085.1| mitochondrial ribosomal protein L4, isoform CRA_b [Homo sapiens]
Length = 263
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KL QDDLHI+ L LP DP+YL L R
Sbjct: 172 LGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYR 210
>gi|355704354|gb|AES02199.1| mitochondrial ribosomal protein L4 [Mustela putorius furo]
Length = 294
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL L++KL QDDLH+V L LP DP+YL L R
Sbjct: 171 VQGLKVALTVKLAQDDLHVVDSLELPTSDPQYLTELARYR 210
>gi|441628993|ref|XP_003275683.2| PREDICTED: 39S ribosomal protein L4, mitochondrial [Nomascus
leucogenys]
Length = 215
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%)
Query: 5 LGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L+IKL QDDLHI+ L LP DP+YL L R
Sbjct: 63 LGLKVALTIKLAQDDLHIMDSLELPTGDPQYLTELAHYR 101
>gi|335282607|ref|XP_003123269.2| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Sus
scrofa]
Length = 294
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL L++KL QDDLHIV L LP DP+YL L R
Sbjct: 171 VQGLKVALTVKLAQDDLHIVDSLELPTADPQYLIELARYR 210
>gi|345310474|ref|XP_003428973.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like, partial
[Ornithorhynchus anatinus]
Length = 201
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 28/40 (70%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGL L+ KL QD+LHIV L LP DP+YL +LV+ R
Sbjct: 79 VLGLKVALTTKLAQDNLHIVDSLELPTSDPQYLIDLVQYR 118
>gi|405946788|gb|EKC17715.1| 39S ribosomal protein L4, mitochondrial [Crassostrea gigas]
Length = 216
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL + LS K Q++LHIV L +P DDP+Y+++L++ R
Sbjct: 93 VQGLCTALSFKYAQNNLHIVDSLEIPTDDPEYIQDLIDTR 132
>gi|99032310|pdb|2FTC|D Chain D, Structural Model For The Large Subunit Of The Mammalian
Mitochondrial Ribosome
gi|251837156|pdb|3IY9|D Chain D, Leishmania Tarentolae Mitochondrial Large Ribosomal
Subunit Model
Length = 175
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++KL QDDLHI+ L LP DP+YL L R
Sbjct: 75 ALGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYR 114
>gi|344282767|ref|XP_003413144.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Loxodonta
africana]
Length = 294
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGL L++KL QD+LHIV L LP D +YL L + R
Sbjct: 171 VLGLKVALTVKLAQDNLHIVDSLELPTPDSQYLTELAQYR 210
>gi|194213187|ref|XP_001493119.2| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Equus
caballus]
Length = 326
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL LS+KL QDDLH+V L LP +P+YL L R
Sbjct: 203 VQGLKVALSVKLAQDDLHVVDSLELPSAEPQYLAELARYR 242
>gi|391333411|ref|XP_003741107.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like
[Metaseiulus occidentalis]
Length = 311
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDL-VLPVDDPKYLENLVEER 43
V GL + LS K Q+DL IV L LP DDPK+LE+L E+R
Sbjct: 178 VHGLQAALSCKFAQNDLRIVDSLDSLPTDDPKFLEDLCEQR 218
>gi|417398496|gb|JAA46281.1| Putative 39s ribosomal protein l4 [Desmodus rotundus]
Length = 294
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENL 39
V GL L++KL QD+LHIV L LP DP+YL+ L
Sbjct: 171 VQGLKVALTVKLAQDNLHIVDSLELPTADPQYLKEL 206
>gi|327287992|ref|XP_003228712.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Anolis
carolinensis]
Length = 314
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL L++KL QD+LH+V L +P DP+YL +L R
Sbjct: 193 VQGLKVALTVKLAQDNLHVVDSLEIPTSDPQYLMDLARYR 232
>gi|66472248|ref|NP_001018572.1| 39S ribosomal protein L4, mitochondrial [Danio rerio]
gi|82192851|sp|Q503X2.1|RM04_DANRE RecName: Full=39S ribosomal protein L4, mitochondrial; Short=L4mt;
Short=MRP-L4
gi|63102139|gb|AAH95145.1| Zgc:110034 [Danio rerio]
Length = 302
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL LS KL QD LHIV L +P DP+YL++LV+ R
Sbjct: 180 VQGLKIALSAKLAQDYLHIVDSLEIPTPDPQYLQDLVKHR 219
>gi|410950408|ref|XP_003981898.1| PREDICTED: 39S ribosomal protein L4, mitochondrial [Felis catus]
Length = 294
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 24/40 (60%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL L++KL QD LHIV L LP DP+YL L R
Sbjct: 171 VQGLKVALTVKLAQDYLHIVDSLELPTSDPQYLTELARYR 210
>gi|387017114|gb|AFJ50675.1| 39S ribosomal protein L4, mitochondrial-like [Crotalus adamanteus]
Length = 301
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGL L+ K MQ DLHIV L +P DP+YL +L R
Sbjct: 180 VLGLKVALTAKQMQGDLHIVDSLEMPTFDPQYLADLARYR 219
>gi|431918988|gb|ELK17855.1| 39S ribosomal protein L4, mitochondrial [Pteropus alecto]
Length = 294
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENL 39
V GL L++KL QD+LHIV L LP DP+YL L
Sbjct: 171 VQGLKVALTVKLAQDNLHIVDSLELPTADPQYLTEL 206
>gi|432099548|gb|ELK28689.1| 39S ribosomal protein L4, mitochondrial [Myotis davidii]
Length = 285
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENL 39
V GL L+IKL QD+LHIV L +P DP+YL L
Sbjct: 162 VQGLKVALTIKLAQDNLHIVDSLEMPTADPQYLTEL 197
>gi|260787918|ref|XP_002588998.1| hypothetical protein BRAFLDRAFT_124913 [Branchiostoma floridae]
gi|229274171|gb|EEN45009.1| hypothetical protein BRAFLDRAFT_124913 [Branchiostoma floridae]
Length = 264
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++K Q DLHIV L +P DP+YLE+LV R
Sbjct: 135 ALGLKVALTVKHSQGDLHIVDTLEIPTTDPEYLEDLVRYR 174
>gi|260807182|ref|XP_002598388.1| hypothetical protein BRAFLDRAFT_128122 [Branchiostoma floridae]
gi|229283660|gb|EEN54400.1| hypothetical protein BRAFLDRAFT_128122 [Branchiostoma floridae]
Length = 264
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
LGL L++K Q DLHIV L +P DP+YLE+LV R
Sbjct: 135 ALGLKVALTVKHSQGDLHIVDRLEIPTTDPEYLEDLVRYR 174
>gi|390363081|ref|XP_792959.3| PREDICTED: 39S ribosomal protein L4, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 270
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 6 GLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
GL L++K QDDLHIV L +P DP YL++L +ER
Sbjct: 128 GLRVALTVKYTQDDLHIVDSLDIPSADPGYLQDLCKER 165
>gi|47212296|emb|CAF90559.1| unnamed protein product [Tetraodon nigroviridis]
Length = 302
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGL LS KL Q LH+V+ L LP DP+YL +L R
Sbjct: 180 VLGLKVALSSKLAQSHLHVVESLNLPSPDPQYLLDLARRR 219
>gi|317575759|ref|NP_001187653.1| mitochondrial 39S ribosomal protein l4 [Ictalurus punctatus]
gi|308323607|gb|ADO28939.1| mitochondrial 39S ribosomal protein l4 [Ictalurus punctatus]
Length = 312
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL L+ KL QD LH++ L +P DP YLE L++ R
Sbjct: 190 VQGLKIALTAKLAQDYLHVIDTLEIPTPDPHYLEELLKHR 229
>gi|123959698|gb|AAI28968.1| LOC100037111 protein [Xenopus laevis]
Length = 169
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGL L+ KL QDDLHI+ L + DP+YL +LV R
Sbjct: 47 VLGLKIALTTKLAQDDLHIIDSLEISTPDPQYLIDLVNHR 86
>gi|349803749|gb|AEQ17347.1| putative mitochondrial ribosomal protein l4, partial [Pipa
carvalhoi]
Length = 130
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGL L+ KL QDDL I+ L +P DP+YL +LV+ R
Sbjct: 23 VLGLKIALTTKLAQDDLRIIDSLEIPSPDPQYLVDLVKHR 62
>gi|291290889|ref|NP_001167475.1| mitochondrial ribosomal protein L4 [Xenopus laevis]
gi|161611723|gb|AAI55897.1| Unknown (protein for MGC:181787) [Xenopus laevis]
Length = 298
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
VLGL L+ KL QDDLHI+ L + DP+YL +LV R
Sbjct: 176 VLGLKIALTTKLAQDDLHIIDSLEISTPDPQYLIDLVNHR 215
>gi|209736972|gb|ACI69355.1| Mitochondrial 39S ribosomal protein L4 [Salmo salar]
Length = 132
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEERCSQVSL 49
V G+ LS KL QD LH+V L +P DP+YL +L+ R SL
Sbjct: 86 VQGIKIALSSKLAQDYLHVVDTLNIPTPDPQYLMDLIRYRHWGGSL 131
>gi|410929341|ref|XP_003978058.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Takifugu
rubripes]
Length = 302
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL LS K+ Q LH+V L +P DP+YL +L+ R
Sbjct: 180 VQGLKVALSSKMSQSYLHVVDSLAIPTPDPQYLRDLIGHR 219
>gi|432842972|ref|XP_004065529.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like [Oryzias
latipes]
Length = 302
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL LS K+ QD LH+V L +P D +YL +L+ R
Sbjct: 180 VQGLKVALSFKMAQDYLHVVDSLHIPTPDSQYLLDLIRRR 219
>gi|62857671|ref|NP_001017222.1| mitochondrial ribosomal protein L4 [Xenopus (Silurana) tropicalis]
gi|89268693|emb|CAJ82705.1| mitochondrial ribosomal protein L4 [Xenopus (Silurana) tropicalis]
Length = 298
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL L+ KL QDDLH++ L + DP+YL +L++ R
Sbjct: 176 VQGLKIALTAKLAQDDLHVIDSLEISTPDPQYLVDLIKHR 215
>gi|225717040|gb|ACO14366.1| Mitochondrial 39S ribosomal protein L4 [Esox lucius]
Length = 302
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL LS KL QD LH+V L +P DP+YL +L+ R
Sbjct: 180 VQGLKIALSSKLAQDYLHVVDTLNIPTPDPEYLMDLIRFR 219
>gi|225707434|gb|ACO09563.1| Mitochondrial 39S ribosomal protein L4 [Osmerus mordax]
Length = 302
Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER-CSQ 46
V GL LS KL Q+ LH+V L +P DP+YL +L+ R C +
Sbjct: 180 VQGLKIALSSKLAQNYLHVVDSLNIPTPDPQYLVDLIRYRYCGE 223
>gi|348533363|ref|XP_003454175.1| PREDICTED: 39S ribosomal protein L4, mitochondrial-like
[Oreochromis niloticus]
Length = 302
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 4 VLGLTSTLSIKLMQDDLHIVKDLVLPVDDPKYLENLVEER 43
V GL LS K QDDLHIV L +P D +YL +L+ R
Sbjct: 180 VQGLKVALSSKKAQDDLHIVDSLNIPTPDSQYLLDLIRHR 219
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.138 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 872,920,218
Number of Sequences: 23463169
Number of extensions: 24816021
Number of successful extensions: 62889
Number of sequences better than 100.0: 100
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 62791
Number of HSP's gapped (non-prelim): 100
length of query: 63
length of database: 8,064,228,071
effective HSP length: 35
effective length of query: 28
effective length of database: 7,243,017,156
effective search space: 202804480368
effective search space used: 202804480368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)