BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5948
(549 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6TGS6|SYYC_DANRE Tyrosine--tRNA ligase, cytoplasmic OS=Danio rerio GN=yars PE=2 SV=2
Length = 529
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/513 (71%), Positives = 421/513 (82%), Gaps = 17/513 (3%)
Query: 16 SLSFDEKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFL 75
LS DEK QLITRNLQE LGE+RL ILKER+LK+YWGTATTG+PH+AYFVPMSKIADFL
Sbjct: 4 QLSPDEKFQLITRNLQEVLGEERLKEILKERELKVYWGTATTGKPHVAYFVPMSKIADFL 63
Query: 76 RAGCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDY 135
+AGCEVTILFADLHAYLDNMKAPWELL LR KYYE+ IKAMLESI VP+ KLKFVKGTDY
Sbjct: 64 KAGCEVTILFADLHAYLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLDKLKFVKGTDY 123
Query: 136 QLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 195
QLS+EYTLDVYRLSS++TEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF
Sbjct: 124 QLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 183
Query: 196 GGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKK 255
GGVDQRKIFTLAEKYLP LGY KR H MNPMVPGL G KMSSSEE+SKIDLLD VKK
Sbjct: 184 GGVDQRKIFTLAEKYLPSLGYTKRSHLMNPMVPGLTGSKMSSSEEESKIDLLDKNQDVKK 243
Query: 256 KLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFA 315
KLKKAFCEPGNVE+NGVLSF+KHV+F L VI RD GG+ ++D++ +E+ FA
Sbjct: 244 KLKKAFCEPGNVENNGVLSFVKHVLFPL---HSEFVIKRDPKFGGDKVYTDFEEVEKDFA 300
Query: 316 KQELHPADLKAAAEFYINRLLEPIRKKFESKELKDLTSKAYP------------PKKPVV 363
+++HP DLKA+ E +N+LL+PIRKKFES ELK LTS AYP PK+
Sbjct: 301 AEQIHPGDLKASVELALNKLLDPIRKKFESPELKKLTSSAYPEPSKNKGGVKGNPKQ-TT 359
Query: 364 ESDIIAPHRLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVKEGDMANR 423
+ D + P RLDIRVGK++ V +HPDA++LY+EKID+GEE PRT+VSGLV Y+ E + +R
Sbjct: 360 DDDEVIPSRLDIRVGKVISVEKHPDADSLYLEKIDVGEEQPRTVVSGLVAYITEEQLQDR 419
Query: 424 LVVVLCNLKPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVEGYETGAP 483
LVV+LCNLKP KMRGIES MVLCAS+E E +KVEPL P S AGD++ VEGYE+G P
Sbjct: 420 LVVLLCNLKPQKMRGIESQAMVLCASIEGE-PRKVEPLDPPEGSAAGDRVYVEGYESGKP 478
Query: 484 DEILNPKKKVWEKLQVDLKTSSEGIAQWQGFNI 516
D+ L PKKKV+EKLQVDLK S E +AQW+ N+
Sbjct: 479 DDELKPKKKVFEKLQVDLKISGEFVAQWKEQNL 511
>sp|Q7ZX51|SYYC_XENLA Tyrosine--tRNA ligase, cytoplasmic OS=Xenopus laevis GN=yars PE=2
SV=1
Length = 528
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/511 (68%), Positives = 413/511 (80%), Gaps = 14/511 (2%)
Query: 16 SLSFDEKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFL 75
SL+ + K QLITRNLQE LGED++ ILKER L+IYWGTATTG+PH+AYFVPMSKIADFL
Sbjct: 4 SLTLEGKAQLITRNLQELLGEDKMKEILKERPLRIYWGTATTGKPHVAYFVPMSKIADFL 63
Query: 76 RAGCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDY 135
+AGCEVTILFADLHAYLDNMKAPW+LL LRT+YYE+ I+AML+SI VP+ +L+F++GT++
Sbjct: 64 KAGCEVTILFADLHAYLDNMKAPWDLLELRTRYYEQVIQAMLQSIGVPLERLRFIRGTEF 123
Query: 136 QLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 195
QLSKEYTLDVYRLSSV+T+HDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF
Sbjct: 124 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 183
Query: 196 GGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKK 255
GGVDQRKIFT AEKYLP LGYAKRIH MNPMVPGL G KMSSSEE+SKIDLLD+PA VKK
Sbjct: 184 GGVDQRKIFTFAEKYLPALGYAKRIHLMNPMVPGLTGAKMSSSEEESKIDLLDSPADVKK 243
Query: 256 KLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFA 315
KLKKAFCEPGNVE+NGVLSF++HV+F L V+ RDE GGN ++D+++LE+ FA
Sbjct: 244 KLKKAFCEPGNVENNGVLSFVRHVLFPL---KSEFVVLRDEKFGGNKTYTDFETLEKDFA 300
Query: 316 KQELHPADLKAAAEFYINRLLEPIRKKFESKELKDLTSKAYP--------PKKPVVESDI 367
++ +HP DLKA+ E +N+LL PIR+KF S E+K L++ AYP PK S
Sbjct: 301 EELVHPGDLKASVEKALNKLLHPIREKFNSPEMKKLSNDAYPDASKQKSVPKGSTKNSGT 360
Query: 368 --IAPHRLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVKEGDMANRLV 425
I P LD+RVGKI+ VS+HPDA++LYVE +D+GE NPR +VSGLV YV + R V
Sbjct: 361 EEIDPSLLDLRVGKILSVSQHPDADSLYVESVDVGEANPRCVVSGLVQYVPSDQLLGRSV 420
Query: 426 VVLCNLKPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVEGYETGAPDE 485
V+LCNLKP KMRGIES GM+LCAS E E K+VEPL P S G++I +EGYE G P+
Sbjct: 421 VLLCNLKPQKMRGIESQGMLLCASTEGE-QKQVEPLDPPSGSAPGERIYIEGYENGEPEG 479
Query: 486 ILNPKKKVWEKLQVDLKTSSEGIAQWQGFNI 516
L PKKKV+EKLQVD + S + AQW+G N
Sbjct: 480 ELKPKKKVFEKLQVDFRISDDLCAQWKGKNF 510
>sp|Q6DIJ1|SYYC_XENTR Tyrosine--tRNA ligase, cytoplasmic OS=Xenopus tropicalis GN=yars
PE=2 SV=1
Length = 528
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/511 (67%), Positives = 413/511 (80%), Gaps = 14/511 (2%)
Query: 16 SLSFDEKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFL 75
L+ + K QLITRNLQE LGED++ ILKER L+IYWGTATTG+PH+AYFVPMSKIADFL
Sbjct: 4 GLTPEGKAQLITRNLQEVLGEDKMKEILKERPLRIYWGTATTGKPHVAYFVPMSKIADFL 63
Query: 76 RAGCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDY 135
+AGCEVTILFADLHAYLDNMKAPW+LL LRT+YYE+ I+AML+SI VP+ +L+F++GT++
Sbjct: 64 KAGCEVTILFADLHAYLDNMKAPWDLLELRTRYYEQVIQAMLQSIGVPLERLRFIRGTEF 123
Query: 136 QLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 195
QLSKEYTLDVYRLSSV+T+HDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF
Sbjct: 124 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 183
Query: 196 GGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKK 255
GGVDQRKIFT AEKYLP LGYAKRIH MNPMVPGL G KMSSSEE+SKIDLLD+PA VKK
Sbjct: 184 GGVDQRKIFTFAEKYLPALGYAKRIHLMNPMVPGLTGAKMSSSEEESKIDLLDSPADVKK 243
Query: 256 KLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFA 315
KLKKAFCEPGN+E+NGVLSF++HV+F L V+ RDE GGN ++D+++LE+ F
Sbjct: 244 KLKKAFCEPGNIENNGVLSFVRHVLFPL---KSEFVVLRDEKFGGNKTYTDFETLEKDFT 300
Query: 316 KQELHPADLKAAAEFYINRLLEPIRKKFESKELKDLTSKAYP--------PKKPVVES-- 365
+Q +HP DLKA+ E +N+LL+PIR+KF S E+K L++ AYP PK S
Sbjct: 301 EQLVHPGDLKASVEKALNKLLDPIREKFNSPEMKKLSNDAYPGASKQKTVPKGSTKNSGP 360
Query: 366 DIIAPHRLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVKEGDMANRLV 425
+ I P LD+RVGKI+ V +HPDA++LYVE +D+GEENPR +VSGLV YV + R V
Sbjct: 361 EEIDPSLLDLRVGKILSVRQHPDADSLYVESVDVGEENPRCVVSGLVQYVPSDQLLGRSV 420
Query: 426 VVLCNLKPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVEGYETGAPDE 485
V+LCNLKP KMRGIES GM+LCAS E E K+VEPL P S G++I +EGYE G P+
Sbjct: 421 VLLCNLKPQKMRGIESQGMLLCASTEGE-QKQVEPLDPPTGSAPGERIYIEGYENGEPEG 479
Query: 486 ILNPKKKVWEKLQVDLKTSSEGIAQWQGFNI 516
L PKKKV+EKLQVD + S + AQW+G N
Sbjct: 480 ELKPKKKVFEKLQVDFRISDDLCAQWKGKNF 510
>sp|Q5ZJ08|SYYC_CHICK Tyrosine--tRNA ligase, cytoplasmic OS=Gallus gallus GN=YARS PE=2
SV=1
Length = 527
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/505 (70%), Positives = 410/505 (81%), Gaps = 13/505 (2%)
Query: 21 EKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLRAGCE 80
EK QLITRNLQE LGED+L ILKER++KIYWGTATTG+PH+AYFVPMSKIADFL+AGCE
Sbjct: 9 EKYQLITRNLQEVLGEDKLMAILKEREVKIYWGTATTGKPHVAYFVPMSKIADFLKAGCE 68
Query: 81 VTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSKE 140
VTILFADLHAYLDNMKAPWELL LRT+YYE IKAMLESI VP+ KLKF++GTDYQLSKE
Sbjct: 69 VTILFADLHAYLDNMKAPWELLELRTRYYEHVIKAMLESIGVPLEKLKFIRGTDYQLSKE 128
Query: 141 YTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQ 200
YTLDVYRLSSV+T+HDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQ
Sbjct: 129 YTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQ 188
Query: 201 RKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKLKKA 260
RKIFT AEKYLP LGYAKRIH MNPMVPGL G KMSSSEEDSKIDLLD VKKKLKKA
Sbjct: 189 RKIFTFAEKYLPSLGYAKRIHLMNPMVPGLTGSKMSSSEEDSKIDLLDRKEDVKKKLKKA 248
Query: 261 FCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQELH 320
FCEPGN+E+NGVLSF+KHV+F L VI R+E GGN ++ Y++LE+ FA+Q +H
Sbjct: 249 FCEPGNIENNGVLSFIKHVLFPL---KSEFVILREEKWGGNKTYTAYETLEKDFAEQVVH 305
Query: 321 PADLKAAAEFYINRLLEPIRKKFESKELKDLTSKAYP---PKKPV------VESDIIAPH 371
P DLK + E +N+LL+PIR+KF S ELK LT+ AYP KP E + I P
Sbjct: 306 PGDLKNSVEAALNKLLDPIREKFNSPELKKLTNAAYPNPSKAKPAEKGTKNSEPETIVPS 365
Query: 372 RLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVKEGDMANRLVVVLCNL 431
RLDIRVGK+V V +HPDA++LYVEKID+GE PRT+VSGLV +V + + +RLVV+LCNL
Sbjct: 366 RLDIRVGKVVSVEKHPDADSLYVEKIDVGEPEPRTVVSGLVQFVPKEQLQDRLVVLLCNL 425
Query: 432 KPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVEGYETGAPDEILNPKK 491
KP KMRG+ES GMVLCAS E ++VEPL P AG+++ VEGYE G PD+ L PKK
Sbjct: 426 KPQKMRGVESQGMVLCASSVGE-PRQVEPLDPPAECCAGERVYVEGYEDGEPDDELKPKK 484
Query: 492 KVWEKLQVDLKTSSEGIAQWQGFNI 516
KV+EKLQ D + S + IAQW+ N
Sbjct: 485 KVFEKLQADFRISEDCIAQWKERNF 509
>sp|Q29465|SYYC_BOVIN Tyrosine--tRNA ligase, cytoplasmic OS=Bos taurus GN=YARS PE=2 SV=4
Length = 528
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/511 (69%), Positives = 413/511 (80%), Gaps = 14/511 (2%)
Query: 16 SLSFDEKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFL 75
SLS +EK LITRNLQE LGE++L ILKER+LK+YWGTATTG+PH+AYFVPMSKIADFL
Sbjct: 4 SLSPEEKLSLITRNLQEVLGEEKLKEILKERELKVYWGTATTGKPHVAYFVPMSKIADFL 63
Query: 76 RAGCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDY 135
+AGCEVTILFADLHAYLDNMKAPW++L LRT YYE IKAMLESI VP+ KL+F+KGTDY
Sbjct: 64 KAGCEVTILFADLHAYLDNMKAPWDVLELRTSYYENVIKAMLESIGVPLEKLRFIKGTDY 123
Query: 136 QLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 195
QLSKEYTLDVYRLSSV+T+HDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF
Sbjct: 124 QLSKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 183
Query: 196 GGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKK 255
GGVDQRKIFT AEKYLP LGY+KRIH MNPMVPGL G KMSSSEE+SKIDLLD VKK
Sbjct: 184 GGVDQRKIFTFAEKYLPALGYSKRIHLMNPMVPGLTGSKMSSSEEESKIDLLDRKEDVKK 243
Query: 256 KLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFA 315
KLKKAFCEPGNVE+NGVL+F++HV+F L VI RDE GGN ++ Y LE+ FA
Sbjct: 244 KLKKAFCEPGNVENNGVLAFIRHVLFPL---KSEFVILRDEKWGGNKTYTAYLDLEKDFA 300
Query: 316 KQELHPADLKAAAEFYINRLLEPIRKKFESKELKDLTSKAYP---PKKPVV-------ES 365
+ +HP DLK + E +N+LL+PIR+KF + LK L+S AYP +KP V E
Sbjct: 301 DEVVHPGDLKNSVEVALNKLLDPIREKFNTPALKKLSSAAYPDPSKQKPAVKGPAKNSEP 360
Query: 366 DIIAPHRLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVKEGDMANRLV 425
+ + P RLDIRVGK++ V +HPDA++LYVEKID+GE PRT+VSGLV +V + ++ +RLV
Sbjct: 361 EEVIPSRLDIRVGKVISVDKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLV 420
Query: 426 VVLCNLKPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVEGYETGAPDE 485
VVLCNLKP KMRG++S GM+LCASVE N+KVEPL P S G+++ V+GYE G PDE
Sbjct: 421 VVLCNLKPQKMRGVKSQGMLLCASVEGV-NRKVEPLDPPAGSAPGERVFVKGYEKGQPDE 479
Query: 486 ILNPKKKVWEKLQVDLKTSSEGIAQWQGFNI 516
L PKKKV+EKLQ D K S E IAQW+ N
Sbjct: 480 ELKPKKKVFEKLQADFKISDEYIAQWKQTNF 510
>sp|Q4KM49|SYYC_RAT Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Yars
PE=2 SV=3
Length = 528
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/509 (69%), Positives = 409/509 (80%), Gaps = 14/509 (2%)
Query: 18 SFDEKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLRA 77
S +EK LITRNLQE LGE++L ILKER+LK+YWGTATTG+PH+AYFVPMSKIADFL+A
Sbjct: 6 SPEEKLHLITRNLQEVLGEEKLKEILKERELKVYWGTATTGKPHVAYFVPMSKIADFLKA 65
Query: 78 GCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQL 137
GCEVTILFADLHAYLDNMKAPWELL LRT YYE IKAMLESI VP+ KLKF KGTDYQL
Sbjct: 66 GCEVTILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEKLKFTKGTDYQL 125
Query: 138 SKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGG 197
SKEYTLDVYRLSS++T+HDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGG
Sbjct: 126 SKEYTLDVYRLSSLVTQHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGG 185
Query: 198 VDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKL 257
+DQRKIFT AEKYLP LGY+KR+H MNPMVPGL G KMSSSEE+SKIDLLD VKKKL
Sbjct: 186 IDQRKIFTFAEKYLPTLGYSKRVHLMNPMVPGLTGSKMSSSEEESKIDLLDRKEDVKKKL 245
Query: 258 KKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQ 317
KKAFCEPGNVE+NGVLSF+KHV+F L VI RDE GGN ++ YQ LE+ FA +
Sbjct: 246 KKAFCEPGNVENNGVLSFVKHVLFPL---KSEFVILRDEKWGGNKTYTIYQELEKDFAAE 302
Query: 318 ELHPADLKAAAEFYINRLLEPIRKKFESKELKDLTSKAYP---PKKPVV-------ESDI 367
+HP DLK + E +N+LL+PIR+KF + LK L S AYP +KP E +
Sbjct: 303 VVHPGDLKNSVEVALNKLLDPIREKFNTPALKKLASAAYPDPSKQKPTAKGPAKSSEPEE 362
Query: 368 IAPHRLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVKEGDMANRLVVV 427
I P RLDIRVGKI+ V +HPDA++LYVEKID+GE PRT+VSGLV +V + ++ +RLVVV
Sbjct: 363 IIPSRLDIRVGKILSVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVV 422
Query: 428 LCNLKPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVEGYETGAPDEIL 487
LCNLKP KMRG++S GM+LCASVE +++VEPL P S G+++ V+GYE G PDE L
Sbjct: 423 LCNLKPQKMRGVDSQGMLLCASVEGV-SRQVEPLDPPAGSAPGERVFVQGYEKGQPDEEL 481
Query: 488 NPKKKVWEKLQVDLKTSSEGIAQWQGFNI 516
PKKKV+EKLQ D K S + +AQW+ N
Sbjct: 482 KPKKKVFEKLQADFKISDDCVAQWKQTNF 510
>sp|P54577|SYYC_HUMAN Tyrosine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=YARS PE=1
SV=4
Length = 528
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/509 (69%), Positives = 408/509 (80%), Gaps = 14/509 (2%)
Query: 18 SFDEKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLRA 77
S +EK LITRNLQE LGE++L ILKER+LKIYWGTATTG+PH+AYFVPMSKIADFL+A
Sbjct: 6 SPEEKLHLITRNLQEVLGEEKLKEILKERELKIYWGTATTGKPHVAYFVPMSKIADFLKA 65
Query: 78 GCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQL 137
GCEVTILFADLHAYLDNMKAPWELL LR YYE IKAMLESI VP+ KLKF+KGTDYQL
Sbjct: 66 GCEVTILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTDYQL 125
Query: 138 SKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGG 197
SKEYTLDVYRLSSV+T+HD+KKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGG
Sbjct: 126 SKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGG 185
Query: 198 VDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKL 257
+DQRKIFT AEKYLP LGY+KR+H MNPMVPGL G KMSSSEE+SKIDLLD VKKKL
Sbjct: 186 IDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSSEEESKIDLLDRKEDVKKKL 245
Query: 258 KKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQ 317
KKAFCEPGNVE+NGVLSF+KHV+F L VI RDE GGN ++ Y LE+ FA +
Sbjct: 246 KKAFCEPGNVENNGVLSFIKHVLFPL---KSEFVILRDEKWGGNKTYTAYVDLEKDFAAE 302
Query: 318 ELHPADLKAAAEFYINRLLEPIRKKFESKELKDLTSKAYP---PKKPVV-------ESDI 367
+HP DLK + E +N+LL+PIR+KF + LK L S AYP +KP+ E +
Sbjct: 303 VVHPGDLKNSVEVALNKLLDPIREKFNTPALKKLASAAYPDPSKQKPMAKGPAKNSEPEE 362
Query: 368 IAPHRLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVKEGDMANRLVVV 427
+ P RLDIRVGKI+ V +HPDA++LYVEKID+GE PRT+VSGLV +V + ++ +RLVVV
Sbjct: 363 VIPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVV 422
Query: 428 LCNLKPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVEGYETGAPDEIL 487
LCNLKP KMRG+ES GM+LCAS+E N++VEPL P S G+ + V+GYE G PDE L
Sbjct: 423 LCNLKPQKMRGVESQGMLLCASIEGI-NRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEEL 481
Query: 488 NPKKKVWEKLQVDLKTSSEGIAQWQGFNI 516
PKKKV+EKLQ D K S E IAQW+ N
Sbjct: 482 KPKKKVFEKLQADFKISEECIAQWKQTNF 510
>sp|Q91WQ3|SYYC_MOUSE Tyrosine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Yars PE=2
SV=3
Length = 528
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/509 (69%), Positives = 409/509 (80%), Gaps = 14/509 (2%)
Query: 18 SFDEKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLRA 77
S +EK LITRNLQE LGE++L ILKER+LK+YWGTATTG+PH+AYFVPMSKIADFL+A
Sbjct: 6 SPEEKLHLITRNLQEVLGEEKLKEILKERELKVYWGTATTGKPHVAYFVPMSKIADFLKA 65
Query: 78 GCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQL 137
GCEVTILFADLHAYLDNMKAPWELL LRT YYE IKAMLESI VP+ KLKF+KGTDYQL
Sbjct: 66 GCEVTILFADLHAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEKLKFIKGTDYQL 125
Query: 138 SKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGG 197
SKEYTLDVYRLSSV+T+HDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGG
Sbjct: 126 SKEYTLDVYRLSSVVTQHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGG 185
Query: 198 VDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKL 257
VDQRKIFT AEKYLP LGY+KR+H MNPMVPGL G KMSSSEE+SKIDLLD VKKKL
Sbjct: 186 VDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSSEEESKIDLLDRKEDVKKKL 245
Query: 258 KKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQ 317
KKAFCEPGNVE+NGVLSF+KHV+F L VI RDE GGN ++ Y LE+ FA +
Sbjct: 246 KKAFCEPGNVENNGVLSFIKHVLFPL---KSEFVILRDEKWGGNKTYTVYLELEKDFAAE 302
Query: 318 ELHPADLKAAAEFYINRLLEPIRKKFESKELKDLTSKAYP---PKKPVV-------ESDI 367
+HP DLK + E +N+LL+PIR+KF + LK L S AYP +KP E +
Sbjct: 303 VVHPGDLKNSVEVALNKLLDPIREKFNTPALKKLASAAYPDPSKQKPPAKGPAKNSEPEE 362
Query: 368 IAPHRLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVKEGDMANRLVVV 427
+ P RLDIRVGKI+ V +HPDA++LYVEKID+GE PRT+VSGLV +V + ++ +RLVVV
Sbjct: 363 VIPSRLDIRVGKILSVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVV 422
Query: 428 LCNLKPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVEGYETGAPDEIL 487
LCNLKP KMRG++S GM+LCASVE +++VEPL P S G+++ V+GYE G PDE L
Sbjct: 423 LCNLKPQKMRGVDSQGMLLCASVEGV-SRQVEPLDPPAGSAPGERVFVQGYEKGQPDEEL 481
Query: 488 NPKKKVWEKLQVDLKTSSEGIAQWQGFNI 516
PKKKV+EKLQ D K S E IAQW+ N
Sbjct: 482 KPKKKVFEKLQADFKISEECIAQWKQTNF 510
>sp|Q5R8T5|SYYC_PONAB Tyrosine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=YARS PE=2
SV=3
Length = 528
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/509 (69%), Positives = 408/509 (80%), Gaps = 14/509 (2%)
Query: 18 SFDEKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLRA 77
S +EK LITRNLQE LGE++L ILKER+LKIYWGTATTG+PH+AYFVPMSKIADFL+A
Sbjct: 6 SPEEKLHLITRNLQEVLGEEKLKEILKERELKIYWGTATTGKPHVAYFVPMSKIADFLKA 65
Query: 78 GCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQL 137
GCEVTILFADLHAYLDNMKAPWELL LR YYE IKAMLESI VP+ KL F+KGTDYQL
Sbjct: 66 GCEVTILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLTFIKGTDYQL 125
Query: 138 SKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGG 197
SKEYTLDVYRLSSV+T+HD+KKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGG
Sbjct: 126 SKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGG 185
Query: 198 VDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKL 257
VDQRKIFT AEKYLP LGY+KR+H MNPMVPGL G KMSSSEE+SKIDLLD VKKKL
Sbjct: 186 VDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSSEEESKIDLLDRKEDVKKKL 245
Query: 258 KKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQ 317
KKAFCEPGNVE+NGVLSF+KHV+F L VI RDE GGN ++ Y LE+ FA +
Sbjct: 246 KKAFCEPGNVENNGVLSFIKHVLFPL---KSEFVILRDERWGGNKTYTAYMDLEKDFAAE 302
Query: 318 ELHPADLKAAAEFYINRLLEPIRKKFESKELKDLTSKAYP---PKKPVV-------ESDI 367
+HP DLK + + +N+LL+PIR+KF + LK L S AYP +KP+ E +
Sbjct: 303 VVHPGDLKNSVDVALNKLLDPIREKFNTPALKKLASAAYPDPSKQKPMAKGPAKNSEPEE 362
Query: 368 IAPHRLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVKEGDMANRLVVV 427
+ P RLDIRVGKI+ V +HPDA++LYVEKID+GE PRT+VSGLV +V + ++ +RLVVV
Sbjct: 363 VIPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVV 422
Query: 428 LCNLKPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVEGYETGAPDEIL 487
LCNLKP KMRG+ES GM+LCAS+E N++VEPL P S G+++ V+GYE G PDE L
Sbjct: 423 LCNLKPQKMRGVESQGMLLCASIEGI-NRQVEPLDPPAGSAPGERVFVKGYEKGQPDEEL 481
Query: 488 NPKKKVWEKLQVDLKTSSEGIAQWQGFNI 516
PKKKV+EKLQ D K S E IAQW+ N
Sbjct: 482 KPKKKVFEKLQADFKISEECIAQWKQTNF 510
>sp|P36421|SYYC_YEAST Tyrosine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TYS1 PE=1 SV=3
Length = 394
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/364 (56%), Positives = 270/364 (74%), Gaps = 13/364 (3%)
Query: 7 MNSLNMTSPSLSFDEKKQLITRNLQEFLGEDRLNVIL--KERDLKIYWGTATTGRPHIAY 64
M+S P+ +F LIT+NLQE L + +L ++R LK+YWGTA TGRPH Y
Sbjct: 1 MSSAATVDPNEAFG----LITKNLQEVLNPQIIKDVLEVQKRHLKLYWGTAPTGRPHCGY 56
Query: 65 FVPMSKIADFLRAGCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPI 124
FVPM+K+ADFL+AGCEVT+L ADLHA+LDNMKAP E++ R KYYE +IKA+L SI+VPI
Sbjct: 57 FVPMTKLADFLKAGCEVTVLLADLHAFLDNMKAPLEVVNYRAKYYELTIKAILRSINVPI 116
Query: 125 SKLKFVKGTDYQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQAL 184
KLKFV G+ YQL+ +YT+D++RLS++++++DAK+AGA+VVKQV +PLLSGL+YP +QAL
Sbjct: 117 EKLKFVVGSSYQLTPDYTMDIFRLSNIVSQNDAKRAGADVVKQVANPLLSGLIYPLMQAL 176
Query: 185 DEEYLKVDAQFGGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLA-GGKMSSSEEDSK 243
DE++L VD QFGGVDQRKIF LAE+ LP LGY KR H MNPMVPGLA GGKMS+S+ +SK
Sbjct: 177 DEQFLDVDCQFGGVDQRKIFVLAEENLPSLGYKKRAHLMNPMVPGLAQGGKMSASDPNSK 236
Query: 244 IDLLDAPALVKKKLKKAFCEPGNVEDNGVLSFLKHVVFSL--LKPGEN---LVITRDENN 298
IDLL+ P VKKK+ AFC PGNVE+NG+LSF+++V+ + LK G N I R E
Sbjct: 237 IDLLEEPKQVKKKINSAFCSPGNVEENGLLSFVQYVIAPIQELKFGTNHFEFFIDRPEKF 296
Query: 299 GGNLNFSDYQSLEQVFAKQELHPADLKAAAEFYINRLLEPIRKKF-ESKELKDLTSKAYP 357
GG + + ++ ++ F +++L P DLK IN LLEPIR++F +KE ++ + K YP
Sbjct: 297 GGPITYKSFEEMKLAFKEEKLSPPDLKIGVADAINELLEPIRQEFANNKEFQEASEKGYP 356
Query: 358 PKKP 361
P
Sbjct: 357 VATP 360
>sp|O14055|SYYC_SCHPO Tyrosine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tys1 PE=3 SV=1
Length = 401
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/349 (56%), Positives = 253/349 (72%), Gaps = 4/349 (1%)
Query: 16 SLSFDEKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFL 75
SL+ DEK +LITRNLQE LG + IL ERD+ +YWG+A TGRPH YFVPM K+ADFL
Sbjct: 2 SLTPDEKYELITRNLQEVLGAKMIREILNERDISLYWGSAPTGRPHCGYFVPMMKLADFL 61
Query: 76 RAGCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDY 135
+AG VT+L AD+HA+LDNMKAP EL+ R +YYE +K++L+S+++PI KL+FV G+ Y
Sbjct: 62 KAGVHVTVLLADVHAFLDNMKAPMELVQHRVRYYEIIVKSILKSLNIPIEKLRFVIGSSY 121
Query: 136 QLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 195
QL ++YTLD +RL++ TEH A++AGAEVVKQV PLLS L+YPG+QALDE+YL VD QF
Sbjct: 122 QLKEDYTLDNFRLAASTTEHTARRAGAEVVKQVASPLLSSLIYPGMQALDEQYLGVDVQF 181
Query: 196 GGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSS-EEDSKIDLLDAPALVK 254
GGVDQRKIF +AE+ LP LGY KR H MNPMVP LAGGKMSSS ++KID+LD P V
Sbjct: 182 GGVDQRKIFVMAEEVLPVLGYKKRGHLMNPMVPSLAGGKMSSSAAANAKIDILDDPKTVN 241
Query: 255 KKLKKAFCEPGNVEDNGVLSFLKHVVFSLLK-PGEN-LVITRDENNGGNLNFSDYQSLEQ 312
KK++ AFCEPG VE+NG L+FLK+V F ++ GE VI R E GG + F Y+ +E+
Sbjct: 242 KKIRSAFCEPGVVEENGCLAFLKYVSFPAMELRGETEFVIDRPEQFGGRMVFKTYEEVEK 301
Query: 313 VFAKQELHPADLKAAAEFYINRLLEPIRKKFES-KELKDLTSKAYPPKK 360
+ L P DLK E +N LL ++++ + +L + AYP K
Sbjct: 302 AYKDLTLSPQDLKLGLESSVNTLLAGVQEQLKQYPDLDSILKAAYPDPK 350
>sp|Q8SRV7|SYYC_ENCCU Probable tyrosine--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU05_1120i PE=3 SV=1
Length = 337
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/341 (53%), Positives = 253/341 (74%), Gaps = 6/341 (1%)
Query: 17 LSFDEKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLR 76
+S ++K LITRNLQE LGE+ L I+ ER+L +YWGTA TG+PHIAY VP+ KI DF+
Sbjct: 1 MSVEQKLYLITRNLQEILGEEELKRIVSERELNVYWGTAITGKPHIAYLVPLMKIKDFVD 60
Query: 77 AGCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQ 136
AGC V ILFAD+H +LDN+KAP E + R YYE+ IK+ L+ + V + +++FVKG+++Q
Sbjct: 61 AGCNVKILFADIHGFLDNLKAPIEKVQHRCAYYEKLIKSALKMLCVDLDRIQFVKGSEFQ 120
Query: 137 LSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFG 196
S+ YT+D+YR+ S+ ++HDAKKAGAEVV+QVE+P++S L+YP +QALDE +L VDAQFG
Sbjct: 121 KSERYTMDLYRILSITSKHDAKKAGAEVVRQVENPMVSSLVYPSMQALDEVHLSVDAQFG 180
Query: 197 GVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKK 256
GVDQRKIFT A KYLP L Y KRIH M+PM+PGL KMSSS++ SKIDL+D+ + +K
Sbjct: 181 GVDQRKIFTYARKYLPLLNYEKRIHLMSPMLPGLNSDKMSSSDDLSKIDLMDSKEAIWRK 240
Query: 257 LKKAFCEPGNVEDNGVLSFLKHVVFSLLK-PGENLVITRDENNGGNLNFSDYQSLEQVFA 315
++K FCE GN +DNG++ H+VF +L+ GE + IT + +G + F YQ E+ F
Sbjct: 241 IRKCFCEEGN-KDNGLMMIFSHIVFPILQLKGECVRIT--DRDGREMAFEKYQEFEEEFV 297
Query: 316 KQELHPADLKAAAEFYINRLLEPIRKKFESKELKDLTSKAY 356
++ +HP DLK+ A I+ ++ PIR++ E K+L D+ +AY
Sbjct: 298 RKSIHPGDLKSNAARLIDEIIRPIREEME-KDL-DMVREAY 336
>sp|B7XHC1|SYYC_ENTBH Probable tyrosine--tRNA ligase, cytoplasmic OS=Enterocytozoon
bieneusi (strain H348) GN=EBI_24879 PE=3 SV=1
Length = 342
Score = 346 bits (888), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/343 (51%), Positives = 235/343 (68%), Gaps = 21/343 (6%)
Query: 19 FDEKKQLITRNLQEFLGEDR--LNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLR 76
F++K LI RNLQE D+ + I+++R+LKIYWGTA TG+PHI YF+P+ KI DF+
Sbjct: 14 FEKKITLIERNLQEITINDKEIIRKIIRKRNLKIYWGTAITGKPHIGYFLPILKIKDFVE 73
Query: 77 AGCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQ 136
A CEVTILFAD+H +LDN+KAP EL+ R YYE+ IK ML S+ I+K++FVKG+DYQ
Sbjct: 74 AECEVTILFADIHGFLDNLKAPIELIENRYHYYEKIIKIMLMSVGCDINKIRFVKGSDYQ 133
Query: 137 LSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFG 196
+ +Y D+Y+L S TE D K+AG++VVKQ ++ LLS L+YP +QALDEEYLKVDAQFG
Sbjct: 134 KNSDYVFDLYKLCSYTTERDCKRAGSDVVKQRDNVLLSSLIYPNMQALDEEYLKVDAQFG 193
Query: 197 GVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKK 256
G DQRKIF A+ +LP+LGY KRIH MNPM+PGL KMSSS+E SKIDLLD + KK
Sbjct: 194 GEDQRKIFMHAKTFLPKLGYKKRIHLMNPMMPGLNSDKMSSSDELSKIDLLDTEQQINKK 253
Query: 257 LKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQV--- 313
+ K FCE GN++ +GVL + V+F ++N Y S+E V
Sbjct: 254 INKCFCEEGNLQ-SGVLHVFEFVIFHYY-------------TSISINKKSYTSIEDVKKD 299
Query: 314 FAKQELHPADLKAAAEFYINRLLEPIRKKFESKELKDLTSKAY 356
F + +HP DLK A YIN+++ PIR + K++ D+ KAY
Sbjct: 300 FEMKLIHPKDLKLACSNYINKMVTPIRNEM-LKDI-DMIKKAY 340
>sp|Q5V4J1|SYY_HALMA Tyrosine--tRNA ligase OS=Haloarcula marismortui (strain ATCC 43049
/ DSM 3752 / JCM 8966 / VKM B-1809) GN=tyrS PE=3 SV=1
Length = 346
Score = 305 bits (782), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 149/340 (43%), Positives = 225/340 (66%), Gaps = 3/340 (0%)
Query: 21 EKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLRAGCE 80
E+ L+TR+ E + ED L + +E D Y G A TG HI +F M K+ADFLRAG +
Sbjct: 5 ERLDLVTRHTTEVVTEDELRTLFEESDPSAYIGYAPTGEMHIGHFTTMRKLADFLRAGVD 64
Query: 81 VTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSKE 140
VT+L ADLHA+LD+ K+P++LL R+ YYE +I+ M+E+ + FV+GTD+QL +E
Sbjct: 65 VTVLIADLHAHLDDNKSPFDLLDARSAYYETAIEGMIEAAGADPEDVTFVRGTDFQLDEE 124
Query: 141 YTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQ 200
YTL++YR+++ T ++A +EVV++ E P L GL+YP +Q LD + L D +GGVDQ
Sbjct: 125 YTLEMYRMAAETTISRTQRAASEVVRESESPNLGGLIYPLMQTLDVKALDADIAYGGVDQ 184
Query: 201 RKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKLKKA 260
R I+ L+ + LP G I P++ GL+GGKMS+S+E SK++L D+P V +K+ +A
Sbjct: 185 RGIYMLSREILPDHGGESPICLFAPLLSGLSGGKMSASDEASKVNLTDSPDEVDEKINQA 244
Query: 261 FCEPGNVEDNGVLSFLKHVVFSLLK-PGENLVITRDENNGGNLNFSDYQSLEQVFAKQEL 319
+C G VE+NGVL +L+H+VF +L G++ V+ R E GG+L + Y +E F EL
Sbjct: 245 YCPAGEVEENGVLEYLQHLVFPVLDVRGDSFVVERPEEYGGDLTYESYDEVESDFVSGEL 304
Query: 320 HPADLKAAAEFYINRLLEPIRKKFESKELKDLTSKAYPPK 359
HPADLK +A I+ +++P+R++ K+ +L ++AYP K
Sbjct: 305 HPADLKPSAASAISDVIDPVRERLADKD--ELLAEAYPEK 342
>sp|C4V6W1|SYYC_NOSCE Probable tyrosine--tRNA ligase, cytoplasmic OS=Nosema ceranae
(strain BRL01) GN=NCER_100158 PE=3 SV=1
Length = 329
Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/320 (47%), Positives = 214/320 (66%), Gaps = 12/320 (3%)
Query: 21 EKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLRAGCE 80
EK +LI RNL+E +G D + I+ +RDL +YWGTATTG+PHIAYF+P+ KI DF+ AGC
Sbjct: 5 EKLKLINRNLKEVIGGDIMEKIINKRDLNVYWGTATTGKPHIAYFLPILKIKDFVDAGCN 64
Query: 81 VTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSKE 140
VTIL AD+HA+LDN+KAP E + R++YY++ I ML+SI V +SK+ F+ G++YQ S +
Sbjct: 65 VTILLADIHAFLDNLKAPIEKIECRSQYYKKIITLMLKSIKVDVSKISFIFGSEYQKSNK 124
Query: 141 YTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQ 200
Y D+ R+ + ++DA++AG+EVVKQV++ LS L+YP +QALDEEYL VD QFGG+DQ
Sbjct: 125 YFTDILRILNQTKKNDARRAGSEVVKQVKNSKLSSLVYPAMQALDEEYLNVDVQFGGIDQ 184
Query: 201 RKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKLKKA 260
RKIF A ++LP L Y KRIH MNPM+PGL KMSSS+ DSKIDLLD + KK+
Sbjct: 185 RKIFMYAREFLPLLKYKKRIHLMNPMIPGLNSDKMSSSDIDSKIDLLDTKLEIYKKIHNC 244
Query: 261 FCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQELH 320
++E+ G++ K +++ P ++ + +G F L + + +
Sbjct: 245 -----SLENEGLIFLFKSIIY----PYCSIFNLQIMISGKVYTFD---KLYEDIKMKIID 292
Query: 321 PADLKAAAEFYINRLLEPIR 340
+LK A I RL+ PIR
Sbjct: 293 ETELKNIASDMIERLICPIR 312
>sp|Q3IQU8|SYY_NATPD Tyrosine--tRNA ligase OS=Natronomonas pharaonis (strain DSM 2160 /
ATCC 35678) GN=tyrS PE=3 SV=1
Length = 345
Score = 269 bits (688), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 203/322 (63%), Gaps = 2/322 (0%)
Query: 21 EKKQLITRNLQEFLGEDRLNVILKERDL-KIYWGTATTGRPHIAYFVPMSKIADFLRAGC 79
E+ L+ R +E + D + + +E+D Y G A TG HI +F M K+ADF+ AG
Sbjct: 5 ERTDLVARFTEEVIERDEIETLFEEQDEPTAYIGYAPTGEMHIGHFTTMRKLADFIDAGL 64
Query: 80 EVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSK 139
+VT+L ADLHA+LD+ K+P+ELL R++YYE +I+ M+ + + F++GTD+QL +
Sbjct: 65 DVTVLVADLHAHLDDAKSPFELLEARSEYYERAIEGMIAAAGADPDGISFIRGTDFQLDE 124
Query: 140 EYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVD 199
YTLD+YRL + T A++AG+EVV+Q E+P L L+Y +QALD L D +GG+D
Sbjct: 125 PYTLDLYRLLADTTLSRAQRAGSEVVRQSENPSLGSLVYTLMQALDVAALDADIAYGGID 184
Query: 200 QRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKLKK 259
QR I+ LA + LP GY K P++ GL+GGKMS+SE SKI+L D + +K+
Sbjct: 185 QRGIYMLAREQLPDHGYDKPACVFAPLLSGLSGGKMSASEAGSKINLTDDGEAIDEKIGG 244
Query: 260 AFCEPGNVEDNGVLSFLKHVVFSLLKPGE-NLVITRDENNGGNLNFSDYQSLEQVFAKQE 318
A+C G E+NGVL +L+++VF + + + V+ R E GG+L + Y LE F E
Sbjct: 245 AYCPAGETEENGVLEYLEYLVFPVFDQRDTSFVVERPEKYGGDLEYGTYDELEADFVSGE 304
Query: 319 LHPADLKAAAEFYINRLLEPIR 340
LHPADLK AA I+ ++ P+R
Sbjct: 305 LHPADLKPAAAAAIDEVVAPVR 326
>sp|O29482|SYY_ARCFU Tyrosine--tRNA ligase OS=Archaeoglobus fulgidus (strain ATCC 49558
/ VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=tyrS
PE=1 SV=1
Length = 323
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 198/328 (60%), Gaps = 10/328 (3%)
Query: 17 LSFDEKKQLITRNLQEFLGEDRLNVILKERDL-KIYWGTATTGRPHIAYFVPMSKIADFL 75
+ EK +LITRN +E + E+ L +++ ++ + Y G +G H+ + + + K+ D
Sbjct: 1 MDITEKLRLITRNAEEVVTEEELRQLIETKEKPRAYVGYEPSGEIHLGHMMTVQKLMDLQ 60
Query: 76 RAGCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDY 135
AG E+ +L AD+HAYL N K +E +A Y K + ++ + S+ KFV G++Y
Sbjct: 61 EAGFEIIVLLADIHAYL-NEKGTFEEIAEVADYN----KKVFIALGLDESRAKFVLGSEY 115
Query: 136 QLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 195
QLS++Y LDV +++ + T + A+++ EV ++ E P++S ++YP +QALD +L VD
Sbjct: 116 QLSRDYVLDVLKMARITTLNRARRSMDEVSRRKEDPMVSQMIYPLMQALDIAHLGVDLAV 175
Query: 196 GGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKK 255
GG+DQRKI LA + LP+LGY+ + P++ GL G KMSSS + + I + D P V++
Sbjct: 176 GGIDQRKIHMLARENLPRLGYSSPVCLHTPILVGLDGQKMSSS-KGNYISVRDPPEEVER 234
Query: 256 KLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFA 315
K++KA+C G VE+N +L K + +L +V+ RD GG++ ++ ++ L + F
Sbjct: 235 KIRKAYCPAGVVEENPILDIAK---YHILPRFGKIVVERDAKFGGDVEYASFEELAEDFK 291
Query: 316 KQELHPADLKAAAEFYINRLLEPIRKKF 343
+LHP DLK A Y+N LLE RK+
Sbjct: 292 SGQLHPLDLKIAVAKYLNMLLEDARKRL 319
>sp|Q8PVK0|SYY_METMA Tyrosine--tRNA ligase OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=tyrS
PE=3 SV=1
Length = 317
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 195/322 (60%), Gaps = 10/322 (3%)
Query: 21 EKKQLITRNLQEFLGEDRLNVILKERDL-KIYWGTATTGRPHIAYFVPMSKIADFLRAGC 79
++ +LI RN+QE + E+ L +L +++ + Y G +G+ H+ + + ++K+ D +AG
Sbjct: 2 DRLELIKRNVQEIVTEEELEGLLNKKETPRAYVGYEPSGKIHMGHVLTVNKLIDLQKAGF 61
Query: 80 EVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSK 139
++T+L AD+HAYL N K E + Y A+ + + FV G+D+QL
Sbjct: 62 KITVLLADVHAYL-NRKGTLEEVRKIADYNRRCFIAL----GLDEEQTDFVYGSDFQLGA 116
Query: 140 EYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVD 199
EY L+V +LS +T + AK++ EV + ++ P +S ++YP +QA+D L+VD GG+D
Sbjct: 117 EYMLNVLKLSRAVTLNRAKRSMDEVGRAMDDPTVSQMVYPLMQAIDIALLEVDVAVGGID 176
Query: 200 QRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKLKK 259
QRKI LA + L LG+ I P++ GL G KM+SS +D+ I + D + +K KK
Sbjct: 177 QRKIHMLARENLKSLGFETPICIHTPILLGLDGTKMASS-KDNFISVDDTEEEIYRKFKK 235
Query: 260 AFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQEL 319
AFC+ G+VE+N +L+ ++ +F E +VI R E GGNL ++ Y +E FA++++
Sbjct: 236 AFCKMGDVEENPILALFRYHIFPRY---ETIVIERPEKFGGNLVYNSYSEMESGFAEEKV 292
Query: 320 HPADLKAAAEFYINRLLEPIRK 341
HP DLK +A YIN +L+P+RK
Sbjct: 293 HPMDLKNSAAKYINEILDPVRK 314
>sp|Q46BQ5|SYY_METBF Tyrosine--tRNA ligase OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=tyrS PE=3 SV=1
Length = 317
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 191/322 (59%), Gaps = 10/322 (3%)
Query: 21 EKKQLITRNLQEFLGEDRLNVIL-KERDLKIYWGTATTGRPHIAYFVPMSKIADFLRAGC 79
++ LI RN+QE + E L +L K++ + Y G +G+ H+ + + ++K+ D +AG
Sbjct: 2 DRLDLIKRNVQEIVTEGELEELLNKKKAPRAYVGYEPSGKIHMGHVLTVNKLIDLQKAGF 61
Query: 80 EVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSK 139
E+T+L AD+HAYL N K E + Y + A+ + K FV G+DYQL
Sbjct: 62 EITVLLADVHAYL-NRKGTLEEVRKIADYNKRCFIAL----GLDKEKTNFVYGSDYQLGA 116
Query: 140 EYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVD 199
EY L+V +LS +T + A+++ EV + ++ P +S ++YP +QA+D L VD GG+D
Sbjct: 117 EYMLNVLKLSRSVTLNRARRSMDEVGRAMDDPTVSQMVYPLMQAIDIAMLGVDIAVGGID 176
Query: 200 QRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKLKK 259
QRKI LA + L LG+ I P++ GL G KM+SS+E+ I + D + +KLKK
Sbjct: 177 QRKIHMLARENLKNLGFETPICIHTPILLGLDGTKMASSKENF-ISVDDTEEEIYRKLKK 235
Query: 260 AFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQEL 319
A+C+ G+ E+N +L+ ++ +F E +VI R E GGN+ ++ Y+ +E F + +
Sbjct: 236 AYCKIGDTEENPILALFRYHIFPRY---ETIVIERPEKFGGNITYTSYEEMENAFVAESV 292
Query: 320 HPADLKAAAEFYINRLLEPIRK 341
HP DLK +A YIN +L+P+RK
Sbjct: 293 HPMDLKNSAAKYINEILDPVRK 314
>sp|Q2FNA1|SYY_METHJ Tyrosine--tRNA ligase OS=Methanospirillum hungatei (strain JF-1 /
DSM 864) GN=tyrS PE=3 SV=1
Length = 313
Score = 208 bits (530), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 183/316 (57%), Gaps = 12/316 (3%)
Query: 26 ITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLRAGCEVTILF 85
+ RN E + ++ L +L K+Y G +G H+ + V ++K+ D AG EVT+L
Sbjct: 7 VIRNTVEVVTDEELRSLLDRPVRKVYAGYEPSGEIHLGHLVTINKLIDLRDAGFEVTVLL 66
Query: 86 ADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSKEYTLDV 145
ADLHA+L N K E + +Y + + ++ +K+V G+ +QLS EY + V
Sbjct: 67 ADLHAFL-NRKGTMEEVKKLAEYNRRCFEGL------GLTDIKYVLGSSFQLSPEYQILV 119
Query: 146 YRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFT 205
+ LS IT + AK++ EV +Q+++P +S ++YP +Q D L VDA GG+DQRKI
Sbjct: 120 HELSQAITLNRAKRSMDEVGRQMDNPTVSQMVYPIMQMADIAMLGVDAALGGIDQRKIHM 179
Query: 206 LAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKLKKAFCEPG 265
LA +YLP Y + P++ GL G KMSSS + + I + ++ ++KK+KKAFC P
Sbjct: 180 LAREYLPSKNYPSPVCIHVPILQGLDGKKMSSS-QGNYISVAESEEDIRKKMKKAFCPP- 237
Query: 266 NVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQELHPADLK 325
VEDN VL L+H +F L + + I R E GGN F Y+ +EQ +AK E+HPADLK
Sbjct: 238 EVEDNPVLQVLQHHIFPRL---DTVTIERPEKFGGNRTFGSYEEMEQAYAKGEIHPADLK 294
Query: 326 AAAEFYINRLLEPIRK 341
A + +L P+R+
Sbjct: 295 TAVAESLITILAPVRE 310
>sp|Q8TSI1|SYY_METAC Tyrosine--tRNA ligase OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=tyrS PE=3 SV=1
Length = 317
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 193/322 (59%), Gaps = 10/322 (3%)
Query: 21 EKKQLITRNLQEFLGEDRLNVILKERDL-KIYWGTATTGRPHIAYFVPMSKIADFLRAGC 79
++ +LI RN+QE + E+ L +LK ++ + Y G +G+ H+ + + ++K+ D +AG
Sbjct: 2 DRLELIRRNVQEIVTEEELEGLLKNKEAPRAYVGYEPSGKIHMGHVLTVNKLIDLQKAGF 61
Query: 80 EVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSK 139
++T+L AD+HAYL N K E + Y A+ + + FV G+D+QL
Sbjct: 62 KITVLLADVHAYL-NKKGTLEEVRKIADYNRRCFIAL----GLDEEQTDFVYGSDFQLGA 116
Query: 140 EYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVD 199
EY L+V +LS +T + AK++ EV + ++ P +S ++YP +QA+D L+VD GG+D
Sbjct: 117 EYMLNVLKLSRAVTLNRAKRSMDEVGRAMDDPTVSQMVYPLMQAIDIALLEVDVAVGGID 176
Query: 200 QRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKLKK 259
QRKI LA + L LG+ I P++ GL G KM+SS +D+ I + D + +K KK
Sbjct: 177 QRKIHMLARENLKSLGFETPICIHTPILLGLDGTKMASS-KDNFISIDDTGEDIYRKFKK 235
Query: 260 AFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQEL 319
AFC+ G+VE+N +L+ ++ +F E +VI R E GG++ + Y +E F ++++
Sbjct: 236 AFCKIGDVEENPILALFRYHIFPRY---ETVVIERPEKFGGDITYHSYAEMESNFIEEKV 292
Query: 320 HPADLKAAAEFYINRLLEPIRK 341
HP DLK AA YIN +L+P+RK
Sbjct: 293 HPMDLKNAAAKYINEILDPVRK 314
>sp|A3CYG9|SYY_METMJ Tyrosine--tRNA ligase OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=tyrS PE=3 SV=1
Length = 315
Score = 202 bits (514), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 120/323 (37%), Positives = 186/323 (57%), Gaps = 12/323 (3%)
Query: 24 QLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLRAGCEVTI 83
+L+TRN E + ++ L ++ ++Y G +G H+ + V ++K+ D +AG EVT+
Sbjct: 5 ELVTRNTVEVVTDEELRALIDRPVRRVYTGYEPSGEIHLGHMVTVNKLMDLQQAGFEVTV 64
Query: 84 LFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSKEYTL 143
L ADLHA+L N K E + +Y + + + +V G+D QL+ EY L
Sbjct: 65 LIADLHAFL-NRKGTMEEIRETAEYNRRCFEGL------GLRGANYVLGSDVQLTPEYEL 117
Query: 144 DVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKI 203
V LS IT + AK++ EV +Q+++P +S ++YP +Q +D L VDA GG+DQRKI
Sbjct: 118 AVLELSQAITLNRAKRSMDEVGRQMDNPTVSQMVYPIMQMVDIATLGVDAAVGGIDQRKI 177
Query: 204 FTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKLKKAFCE 263
LA ++LP +GY + P++ GL G KMSSS + I + D+ +KKK+KKAFC
Sbjct: 178 HMLAREHLPSIGYPAPVCIHTPIINGLDGKKMSSSAGNV-ISVADSEEDIKKKMKKAFCP 236
Query: 264 PGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQELHPAD 323
P VE+N VL L++ VF + G + I R E GG+ F+ Y+ LE+ +A E+HP D
Sbjct: 237 P-EVENNPVLEILRYHVFP--RAGA-VAIRRPEKFGGDREFAAYEDLERAYAAGEIHPLD 292
Query: 324 LKAAAEFYINRLLEPIRKKFESK 346
LK AA ++ +L P+ S+
Sbjct: 293 LKNAAAAHLIDILAPVHDYVCSR 315
>sp|A2SU89|SYY_METLZ Tyrosine--tRNA ligase OS=Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z) GN=tyrS PE=3 SV=1
Length = 317
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 179/313 (57%), Gaps = 12/313 (3%)
Query: 24 QLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLRAGCEVTI 83
+L+TRN E + ED L +L + ++Y G +G H+ + V ++K+ D AG +V +
Sbjct: 5 ELVTRNTAEIVTEDELRALLNKPTKRVYTGYEPSGEIHLGHLVTINKLMDMKAAGFDVVV 64
Query: 84 LFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSKEYTL 143
L A+LHAYL N K +E + Y + I+A V + +FV GTD QL+ +Y
Sbjct: 65 LIANLHAYL-NRKGTFEQIKELADYNKACIEA------VGLKGAEFVLGTDVQLTPKYQT 117
Query: 144 DVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKI 203
+V L IT + A ++ EV + +++P++S ++YP +Q +D L VDA GG+DQRKI
Sbjct: 118 EVLTLCQQITLNRATRSMDEVGRAMDNPMVSQMVYPVMQVVDIPTLNVDAAVGGIDQRKI 177
Query: 204 FTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKLKKAFCE 263
LA ++LP LGY + P+V GL G KMSSS+ + + + D+P +KKK+KKAFC
Sbjct: 178 HMLAREHLPTLGYKPPVCIHTPIVNGLDGEKMSSSKGNV-VSVADSPEEIKKKMKKAFCP 236
Query: 264 PGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQELHPAD 323
P E N +L ++ VF + + + I R E GG+L F Y LE +A ++HP D
Sbjct: 237 P-ETEGNPILQIFRYNVFPRM---DTIAIRRPEKFGGDLEFHSYAELEAAYAGGKIHPMD 292
Query: 324 LKAAAEFYINRLL 336
LKAA + LL
Sbjct: 293 LKAACGDALTELL 305
>sp|Q57834|SYY_METJA Tyrosine--tRNA ligase OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=tyrS PE=1 SV=1
Length = 306
Score = 189 bits (479), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 186/321 (57%), Gaps = 20/321 (6%)
Query: 24 QLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLRAGCEVTI 83
++I RN E + E+ L +LK+ + Y G +G+ H+ +++ + K+ D AG ++ I
Sbjct: 5 EMIKRNTSEIISEEELREVLKKDEKSAYIGFEPSGKIHLGHYLQIKKMIDLQNAGFDIII 64
Query: 84 LFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSKEYTL 143
L ADLHAYL N K + + Y ++ +AM K K+V G+++QL K+YTL
Sbjct: 65 LLADLHAYL-NQKGELDEIRKIGDYNKKVFEAMG-------LKAKYVYGSEFQLDKDYTL 116
Query: 144 DVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKI 203
+VYRL+ T A+++ + ++ E+P ++ ++YP +Q D YL VD GG++QRKI
Sbjct: 117 NVYRLALKTTLKRARRSMELIAREDENPKVAEVIYPIMQVNDIHYLGVDVAVGGMEQRKI 176
Query: 204 FTLAEKYLPQLGYAKRIHFMNPMVPGLAG-GKMSSSEEDSKIDLLDAPALVKKKLKKAFC 262
LA + LP+ K + NP++ GL G GKMSSS+ + I + D+P ++ K+KKA+C
Sbjct: 177 HMLARELLPK----KVVCIHNPVLTGLDGEGKMSSSKGNF-IAVDDSPEEIRAKIKKAYC 231
Query: 263 EPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQELHPA 322
G VE N ++ K + L P L I R E GG+L + Y+ LE +F +ELHP
Sbjct: 232 PAGVVEGNPIMEIAK---YFLEYP---LTIKRPEKFGGDLTVNSYEELESLFKNKELHPM 285
Query: 323 DLKAAAEFYINRLLEPIRKKF 343
DLK A + ++LEPIRK+
Sbjct: 286 DLKNAVAEELIKILEPIRKRL 306
>sp|Q12W06|SYY_METBU Tyrosine--tRNA ligase OS=Methanococcoides burtonii (strain DSM
6242) GN=tyrS PE=3 SV=1
Length = 317
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 189/325 (58%), Gaps = 10/325 (3%)
Query: 21 EKKQLITRNLQEFLGEDRLNVILK-ERDLKIYWGTATTGRPHIAYFVPMSKIADFLRAGC 79
E LI RN+QE + E+ L +L+ ++ Y G +G+ H+ + + ++K+ D +AG
Sbjct: 2 ENMDLIKRNVQEIVTEEELTKLLETKKHPSAYTGYEPSGKIHMGHVLTVNKLLDLQKAGF 61
Query: 80 EVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSK 139
E+T+L AD+HAYL N K + + Y ++ A+ +D ++ FV G+D+QLS
Sbjct: 62 EITVLLADVHAYL-NQKGTMDEVRKTADYNKKCFLAL--GLDPEMTN--FVYGSDFQLSP 116
Query: 140 EYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVD 199
EY L+V +L+ + + AK++ EV +++E P +S ++YP +QA+D L VD GG+D
Sbjct: 117 EYMLNVLKLTQATSLNRAKRSMDEVGRKMEDPKVSQMVYPIMQAVDIALLGVDVAVGGID 176
Query: 200 QRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKLKK 259
QRKI LA + LP LG+ + P++ GL G KMSSS E+ I + D A +KKK KK
Sbjct: 177 QRKIHMLAREGLPGLGFKAPLCIHTPILLGLDGTKMSSSNENY-ISVDDDEAALKKKFKK 235
Query: 260 AFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQEL 319
AFC ++E+N VL K + + + +V R E GG+L Y LE+VFA L
Sbjct: 236 AFCPAEDIENNPVLELFK---YHITPRYDEMVFERPEKFGGDLVCKSYAELEKVFADGSL 292
Query: 320 HPADLKAAAEFYINRLLEPIRKKFE 344
HP DLK A Y+N +LEP+R E
Sbjct: 293 HPMDLKNGAAKYLNEILEPVRSVLE 317
>sp|Q8TXZ2|SYY_METKA Tyrosine--tRNA ligase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=tyrS PE=3 SV=1
Length = 324
Score = 185 bits (469), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 188/326 (57%), Gaps = 9/326 (2%)
Query: 17 LSFDEKKQLITRNLQEFLGEDRLNVILKERDLKI-YWGTATTGRPHIAYFVPMSKIADFL 75
+ +E+ +L+TRN E + E+ L +L+E++ + Y G +G+ H+ + + + K+ D
Sbjct: 1 MDVEERLKLVTRNAVEVVTEEELRQLLEEKEEPVAYVGFEPSGKVHLGHKLVIDKMIDLQ 60
Query: 76 RAGCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDY 135
AG V IL ADLHAYL N K E + Y AM + +K +FV G+++
Sbjct: 61 EAGFHVIILLADLHAYL-NEKGTLEEVRELADYNRRCFLAM----GLDPNKTEFVLGSEF 115
Query: 136 QLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 195
QL ++Y LDVYR++ T A+++ + + E+P +S ++YP +QALD +L VD
Sbjct: 116 QLDEDYALDVYRMARHTTMRRARRSMDMIARSEENPPVSQVVYPLMQALDIVHLNVDLAV 175
Query: 196 GGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKK 255
GG++QRKI LA LP+LGY P++ GL G + SS +++ I + D P ++++
Sbjct: 176 GGLEQRKIHMLARDVLPKLGYDSPTCLHTPIIHGLDGDEKMSSSKNNFIAVDDEPEVIRE 235
Query: 256 KLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFA 315
KL+KA+C E N +L ++ +F + + + I R E GG++ ++ Y+ LE+ F
Sbjct: 236 KLRKAYCPAREAEGNPILEIYRYFIF---REYDEVTIERPEKYGGDVTYTSYEELERDFV 292
Query: 316 KQELHPADLKAAAEFYINRLLEPIRK 341
ELHP DLK A Y++ +L+P+RK
Sbjct: 293 DGELHPLDLKENAAGYLSEILKPVRK 318
>sp|Q20970|SYMC_CAEEL Methionine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=mrs-1 PE=2 SV=1
Length = 917
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 87/148 (58%), Positives = 107/148 (72%), Gaps = 5/148 (3%)
Query: 366 DIIAPHRLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVKEGDMANRLV 425
D I RLD+RVG+I++ +HPDA+ALYVE+ID+GE PRT+VSGLV +V M NRLV
Sbjct: 753 DTIDVGRLDMRVGRIIKCEKHPDADALYVEQIDVGESAPRTVVSGLVRHVPLDQMQNRLV 812
Query: 426 VVLCNLKPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVEGYETGAPDE 485
VVLCNLKPAKMRG+ES MV+CAS + KVE + VP SK G +V Y T PDE
Sbjct: 813 VVLCNLKPAKMRGVESRAMVMCASSPD----KVEIMEVPADSKPGTPVVCPPY-THRPDE 867
Query: 486 ILNPKKKVWEKLQVDLKTSSEGIAQWQG 513
LNPKKK+WE + DLK S+EG A+W+G
Sbjct: 868 QLNPKKKIWETVAEDLKVSAEGFAEWKG 895
>sp|A6URQ1|SYY_METVS Tyrosine--tRNA ligase OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=tyrS PE=3 SV=1
Length = 319
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 183/321 (57%), Gaps = 18/321 (5%)
Query: 26 ITRNLQEFLGEDRLNVILKERDLKI-YWGTATTGRPHIAYFVPMSKIADFLRAGCEVTIL 84
I +N E + + +N +LK+ KI Y G +G+ H+ +++ + K+ D +AG ++ IL
Sbjct: 15 ILKNTSEIVSIEEMNELLKKEGEKIAYIGFEPSGKIHLGHYLQIKKMIDLQKAGFKIIIL 74
Query: 85 FADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSKEYTLD 144
ADLHAYL+ E+ AL EE+ KA ES+ + +V G+++QL++EYT+D
Sbjct: 75 LADLHAYLNQKGTMEEIRALG----EENKKA-FESMGLIAD---YVYGSEFQLNEEYTID 126
Query: 145 VYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIF 204
VY+L+ T + AK++ + ++ E+P ++ ++YP +Q D ++L VD GG++QRKI
Sbjct: 127 VYKLALATTLNRAKRSMEVIAREDENPKVASVVYPLMQVNDIKHLNVDVAVGGMEQRKIH 186
Query: 205 TLAEKYLPQLGYAKRIHFMNPMVPGLAG-GKMSSSEEDSKIDLLDAPALVKKKLKKAFCE 263
L+ + LP +GY I NP++ GL G GKMSSS + + I + D +K KLK AFC
Sbjct: 187 MLSREILPNMGYKAPICIHNPILTGLDGEGKMSSS-KGNLIAVDDDEVTIKNKLKNAFCP 245
Query: 264 PGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQELHPAD 323
V N VL + + L P + I R E GGNL ++Y LE + + LHP D
Sbjct: 246 MKEVFGNPVLEIAR---YYLDYP---VNINRPEKYGGNLVLNNYGELETAYI-EGLHPMD 298
Query: 324 LKAAAEFYINRLLEPIRKKFE 344
+K + +L PIR+K +
Sbjct: 299 VKTLVAEQLIEILNPIREKIK 319
>sp|Q4JCH6|SYY_SULAC Tyrosine--tRNA ligase OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=tyrS PE=3 SV=1
Length = 361
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 183/359 (50%), Gaps = 28/359 (7%)
Query: 17 LSFDEKKQLITRNLQEFLGEDRLNVILKERD-LKIYWGTATTGRPHIAYFVPMSKIADFL 75
++ DEK +LITRN E + D L L+E LK Y G +G HI + + K+ D +
Sbjct: 1 MNIDEKIKLITRNTDEVITIDELKKKLEENSKLKGYIGFEPSGLFHIGWLIWAQKLKDLI 60
Query: 76 RAGCEVTILFADLHAYL-DNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTD 134
+AG +++IL A HA + D + E + L KY E +LE V +SKLK V D
Sbjct: 61 KAGVDMSILVATWHAMINDKLGGDLEKIKLAGKYALE----VLEGFGVDMSKLKVVYAED 116
Query: 135 YQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLL--SGLLYPGLQALDEEYLKVD 192
+ +Y V +++ + K+A + ++ E L S L+YP +Q D + +D
Sbjct: 117 LVENIDYWSLVVKVAKNTSLARMKRALTIMGRRSEEAELDTSKLIYPAMQVSDIFFQDLD 176
Query: 193 AQFGGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGG-----------------KM 235
GG DQRK LA +L K I P++ GL GG KM
Sbjct: 177 IALGGTDQRKAHMLARDVAEKLQRKKVIAIHTPLLVGLQGGQRMNTEGLEEDDYLATIKM 236
Query: 236 SSSEEDSKIDLLDAPALVKKKLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRD 295
S S+ ++ I + D+P LV+ KLK ++C G V DN VL K+++F + G L I RD
Sbjct: 237 SKSKPETAIFIHDSPELVESKLKNSYCPKGVVNDNPVLQINKYIIFG--EQGVTLKIERD 294
Query: 296 ENNGGNLNFSDYQSLEQVFAKQELHPADLKAAAEFYINRLLEPIRKKFESK-ELKDLTS 353
GG++ Y+ LE++F + +LHP DLK A +N +L+PIRK+ SK + DL S
Sbjct: 295 TKYGGDIEIKSYEELERIFIEGKLHPLDLKLATARKLNDILDPIRKRISSKSQFVDLIS 353
>sp|Q6M0K7|SYY_METMP Tyrosine--tRNA ligase OS=Methanococcus maripaludis (strain S2 / LL)
GN=tyrS PE=3 SV=1
Length = 319
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 176/319 (55%), Gaps = 17/319 (5%)
Query: 26 ITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLRAGCEVTILF 85
I +N E + + L +LK+ + Y G +GR H+ +++ + K+ D +AG ++ IL
Sbjct: 15 ILKNTSEIVSIEELTELLKKEEKIAYIGFEPSGRIHMGHYLQIRKMIDLQKAGFKIVILL 74
Query: 86 ADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSKEYTLDV 145
ADLHAYL+ E+ AL E + + E++ + +V G+++QL EYT+DV
Sbjct: 75 ADLHAYLNQKGTMDEVRALG-----EENRKVFEAMGLVAD---YVYGSEFQLKDEYTIDV 126
Query: 146 YRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFT 205
Y+L+ T + A+++ + ++ E+P ++ ++YP +Q D ++L D GG++QRKI
Sbjct: 127 YKLALSTTLNRARRSMEVIAREDENPKVASVVYPLMQVNDIKHLNADVAVGGMEQRKIHM 186
Query: 206 LAEKYLPQLGYAKRIHFMNPMVPGLAG-GKMSSSEEDSKIDLLDAPALVKKKLKKAFCEP 264
L+ + LP +GY + NP++ GL G GKMSSS+ + I + D A +KKK+K AFC
Sbjct: 187 LSREILPSMGYKAPVCIHNPVLTGLDGEGKMSSSKGNF-IAVDDDEATIKKKMKNAFCPM 245
Query: 265 GNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQELHPADL 324
V N VL K + L P + R E GG+L Y++LE F + LHP D+
Sbjct: 246 KEVSGNPVLEIAK---YYLKYPA---TVKRPEKFGGDLVLESYEALENAFV-EGLHPMDV 298
Query: 325 KAAAEFYINRLLEPIRKKF 343
K + +L PIR+K
Sbjct: 299 KNLVSEQLIEILRPIREKM 317
>sp|C3N8R2|SYY_SULIY Tyrosine--tRNA ligase OS=Sulfolobus islandicus (strain Y.G.57.14 /
Yellowstone #1) GN=tyrS PE=3 SV=1
Length = 361
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 181/362 (50%), Gaps = 32/362 (8%)
Query: 17 LSFDEKKQLITRNLQEFLGEDRLNVILK-ERDLKIYWGTATTGRPHIAYFVPMSKIADFL 75
+S D++ QLITRN E + D L L+ E LK Y G +G HI + + K+ D +
Sbjct: 1 MSIDQRLQLITRNAAEIITIDELRKKLESEEKLKGYIGFEPSGLFHIGWLIWTQKVKDLV 60
Query: 76 RAGCEVTILFADLHAYL-DNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTD 134
AG +T+L A HA++ D + L+ + Y E IK + V +KL V D
Sbjct: 61 EAGVNMTLLRATWHAWINDKLGGDLSLIKMAADYTVEVIK----NYGVDTTKLNIVDADD 116
Query: 135 YQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLL--SGLLYPGLQALDEEYLKVD 192
K+Y V +++ + K+A + ++ E + S L+YP +Q D YL +D
Sbjct: 117 MVKEKDYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYLDLD 176
Query: 193 AQFGGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGG------------------K 234
GG DQRK LA ++G K + P++ GL GG K
Sbjct: 177 IALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMSITEGMEEDDIQAEIK 236
Query: 235 MSSSEEDSKIDLLDAPALVKKKLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLV-IT 293
MS S+ +S I + D+ V++K+ A+C G E+N +L LK+++F P N V I
Sbjct: 237 MSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIF----PRYNFVKIE 292
Query: 294 RDENNGGNLNFSDYQSLEQVFAKQELHPADLKAAAEFYINRLLEPIRKKFESK-ELKDLT 352
RD GG++ F DY+ LE+ + + ++HP DLK A +N +LEPIRK E K E +++
Sbjct: 293 RDIRYGGDVEFKDYEELERAYIEGKIHPMDLKKATARRLNEILEPIRKSLERKPEFEEMI 352
Query: 353 SK 354
K
Sbjct: 353 QK 354
>sp|C3MJP1|SYY_SULIL Tyrosine--tRNA ligase OS=Sulfolobus islandicus (strain L.S.2.15 /
Lassen #1) GN=tyrS PE=3 SV=1
Length = 361
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 181/362 (50%), Gaps = 32/362 (8%)
Query: 17 LSFDEKKQLITRNLQEFLGEDRLNVILK-ERDLKIYWGTATTGRPHIAYFVPMSKIADFL 75
+S D++ QLITRN E + D L L+ E LK Y G +G HI + + K+ D +
Sbjct: 1 MSIDQRLQLITRNAAEIITIDELRKKLESEEKLKGYIGFEPSGLFHIGWLIWTQKVKDLV 60
Query: 76 RAGCEVTILFADLHAYL-DNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTD 134
AG +T+L A HA++ D + L+ + Y E IK + V +KL V D
Sbjct: 61 EAGVNMTLLRATWHAWINDKLGGDLSLIKMAADYTVEVIK----NYGVDTTKLNIVDADD 116
Query: 135 YQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLL--SGLLYPGLQALDEEYLKVD 192
K+Y V +++ + K+A + ++ E + S L+YP +Q D YL +D
Sbjct: 117 MVKEKDYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYLDLD 176
Query: 193 AQFGGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGG------------------K 234
GG DQRK LA ++G K + P++ GL GG K
Sbjct: 177 IALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMSITEGMEEDDIQAEIK 236
Query: 235 MSSSEEDSKIDLLDAPALVKKKLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLV-IT 293
MS S+ +S I + D+ V++K+ A+C G E+N +L LK+++F P N V I
Sbjct: 237 MSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIF----PRYNFVKIE 292
Query: 294 RDENNGGNLNFSDYQSLEQVFAKQELHPADLKAAAEFYINRLLEPIRKKFESK-ELKDLT 352
RD GG++ F DY+ LE+ + + ++HP DLK A +N +LEPIRK E K E +++
Sbjct: 293 RDIRYGGDVEFKDYEELERAYIEGKIHPMDLKKATARRLNEILEPIRKSLERKPEFEEMI 352
Query: 353 SK 354
K
Sbjct: 353 QK 354
>sp|C3N048|SYY_SULIA Tyrosine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.27)
GN=tyrS PE=3 SV=1
Length = 361
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 181/362 (50%), Gaps = 32/362 (8%)
Query: 17 LSFDEKKQLITRNLQEFLGEDRLNVILK-ERDLKIYWGTATTGRPHIAYFVPMSKIADFL 75
+S D++ QLITRN E + D L L+ E LK Y G +G HI + + K+ D +
Sbjct: 1 MSIDQRLQLITRNAAEIITIDELRKKLESEEKLKGYIGFEPSGLFHIGWLIWTQKVKDLV 60
Query: 76 RAGCEVTILFADLHAYL-DNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTD 134
AG +T+L A HA++ D + L+ + Y E IK + V +KL V D
Sbjct: 61 EAGVNMTLLRATWHAWINDKLGGDLSLIKMAADYTVEVIK----NYGVDTTKLNIVDADD 116
Query: 135 YQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLL--SGLLYPGLQALDEEYLKVD 192
K+Y V +++ + K+A + ++ E + S L+YP +Q D YL +D
Sbjct: 117 MVKEKDYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYLDLD 176
Query: 193 AQFGGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGG------------------K 234
GG DQRK LA ++G K + P++ GL GG K
Sbjct: 177 IALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMSITEGMEEDDIQAEIK 236
Query: 235 MSSSEEDSKIDLLDAPALVKKKLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLV-IT 293
MS S+ +S I + D+ V++K+ A+C G E+N +L LK+++F P N V I
Sbjct: 237 MSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIF----PRYNFVKIE 292
Query: 294 RDENNGGNLNFSDYQSLEQVFAKQELHPADLKAAAEFYINRLLEPIRKKFESK-ELKDLT 352
RD GG++ F DY+ LE+ + + ++HP DLK A +N +LEPIRK E K E +++
Sbjct: 293 RDIRYGGDVEFKDYEELERAYIEGKIHPMDLKKATARRLNEILEPIRKSLERKPEFEEMI 352
Query: 353 SK 354
K
Sbjct: 353 QK 354
>sp|C3NMQ6|SYY_SULIN Tyrosine--tRNA ligase OS=Sulfolobus islandicus (strain Y.N.15.51 /
Yellowstone #2) GN=tyrS PE=3 SV=1
Length = 361
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 180/362 (49%), Gaps = 32/362 (8%)
Query: 17 LSFDEKKQLITRNLQEFLGEDRLNV-ILKERDLKIYWGTATTGRPHIAYFVPMSKIADFL 75
+S D++ QLITRN E + D L I E LK Y G +G HI + + K+ D +
Sbjct: 1 MSIDQRLQLITRNAAEIITIDELRKKIESEEKLKGYIGFEPSGLFHIGWLIWTQKVKDLV 60
Query: 76 RAGCEVTILFADLHAYL-DNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTD 134
AG +T+L A HA++ D + L+ + Y E IK + V +KL V D
Sbjct: 61 EAGVNMTLLRATWHAWINDKLGGDLSLIKMAADYTVEVIK----NYGVDTTKLNIVDADD 116
Query: 135 YQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLL--SGLLYPGLQALDEEYLKVD 192
K+Y V +++ + K+A + ++ E + S L+YP +Q D YL +D
Sbjct: 117 MVKEKDYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYLDLD 176
Query: 193 AQFGGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGG------------------K 234
GG DQRK LA ++G K + P++ GL GG K
Sbjct: 177 IALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMSITEGMEEDDIQAEIK 236
Query: 235 MSSSEEDSKIDLLDAPALVKKKLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLV-IT 293
MS S+ +S I + D+ V++K+ A+C G E+N +L LK+++F P N V I
Sbjct: 237 MSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIF----PRYNFVKIE 292
Query: 294 RDENNGGNLNFSDYQSLEQVFAKQELHPADLKAAAEFYINRLLEPIRKKFESK-ELKDLT 352
RD GG++ F DY+ LE+ + + ++HP DLK A +N +LEPIRK E K E +++
Sbjct: 293 RDIRYGGDVEFKDYEELERAYIEGKIHPMDLKKATARRLNEILEPIRKSLERKPEFEEMI 352
Query: 353 SK 354
K
Sbjct: 353 QK 354
>sp|C3MYZ9|SYY_SULIM Tyrosine--tRNA ligase OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=tyrS PE=3 SV=1
Length = 361
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 176/353 (49%), Gaps = 31/353 (8%)
Query: 17 LSFDEKKQLITRNLQEFLGEDRLNVILK-ERDLKIYWGTATTGRPHIAYFVPMSKIADFL 75
+S D++ QLITRN E + D L L+ E LK Y G +G HI + + K+ D +
Sbjct: 1 MSIDQRLQLITRNAAEIITIDELRKKLESEEKLKGYIGFEPSGLFHIGWLIWTQKVKDLV 60
Query: 76 RAGCEVTILFADLHAYL-DNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTD 134
AG +T+L A HA++ D + L+ + Y E IK + V +KL V D
Sbjct: 61 EAGVNMTLLRATWHAWINDKLGGDLSLIKMAADYTVEVIK----NYGVDTTKLNIVDADD 116
Query: 135 YQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLL--SGLLYPGLQALDEEYLKVD 192
K+Y V +++ + K+A + ++ E + S L+YP +Q D YL +D
Sbjct: 117 MVKEKDYWALVIKVAKNSSLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYLDLD 176
Query: 193 AQFGGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGG------------------K 234
GG DQRK LA ++G K + P++ GL GG K
Sbjct: 177 IALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMSITEGMEEDDIQAEIK 236
Query: 235 MSSSEEDSKIDLLDAPALVKKKLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLV-IT 293
MS S+ +S I + D+ V++K+ A+C G E+N +L LK+++F P N V I
Sbjct: 237 MSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIF----PRYNFVKIE 292
Query: 294 RDENNGGNLNFSDYQSLEQVFAKQELHPADLKAAAEFYINRLLEPIRKKFESK 346
RD GG++ F DY+ LE+ + + ++HP DLK A +N +LEPIRK E K
Sbjct: 293 RDIRYGGDVEFKDYEELERAYIEGKIHPMDLKKATARRLNEILEPIRKSLERK 345
>sp|C4KJ87|SYY_SULIK Tyrosine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=tyrS PE=3 SV=1
Length = 361
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 176/353 (49%), Gaps = 31/353 (8%)
Query: 17 LSFDEKKQLITRNLQEFLGEDRLNVILK-ERDLKIYWGTATTGRPHIAYFVPMSKIADFL 75
+S D++ QLITRN E + D L L+ E LK Y G +G HI + + K+ D +
Sbjct: 1 MSIDQRLQLITRNAAEIITIDELRKKLESEEKLKGYIGFEPSGLFHIGWLIWTQKVKDLV 60
Query: 76 RAGCEVTILFADLHAYL-DNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTD 134
AG +T+L A HA++ D + L+ + Y E IK + V +KL V D
Sbjct: 61 EAGVNMTLLRATWHAWINDKLGGDLSLIKMAADYTVEVIK----NYGVDTTKLNIVDADD 116
Query: 135 YQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLL--SGLLYPGLQALDEEYLKVD 192
K+Y V +++ + K+A + ++ E + S L+YP +Q D YL +D
Sbjct: 117 MVKEKDYWALVIKVAKNSSLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYLDLD 176
Query: 193 AQFGGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGG------------------K 234
GG DQRK LA ++G K + P++ GL GG K
Sbjct: 177 IALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMSITEGMEEDDIQAEIK 236
Query: 235 MSSSEEDSKIDLLDAPALVKKKLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLV-IT 293
MS S+ +S I + D+ V++K+ A+C G E+N +L LK+++F P N V I
Sbjct: 237 MSKSKPESAIFVSDSREDVERKIMGAYCPKGVAENNPILQILKYIIF----PRYNFVKIE 292
Query: 294 RDENNGGNLNFSDYQSLEQVFAKQELHPADLKAAAEFYINRLLEPIRKKFESK 346
RD GG++ F DY+ LE+ + + ++HP DLK A +N +LEPIRK E K
Sbjct: 293 RDIRYGGDVEFKDYEELERAYIEGKIHPMDLKKATARRLNEILEPIRKSLERK 345
>sp|Q96YV3|SYY_SULTO Tyrosine--tRNA ligase OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=tyrS PE=3 SV=3
Length = 364
Score = 165 bits (418), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 182/354 (51%), Gaps = 25/354 (7%)
Query: 12 MTSPSLSFDEKKQLITRNLQEFLGEDRLNVILKE-RDLKIYWGTATTGRPHIAYFVPMSK 70
M +L+ +EK ++I++N E + D L L+E + LK Y G +G HI + + K
Sbjct: 1 MGILTLNVEEKIKIISKNTAEIVTIDELRKKLEENQKLKGYIGFEPSGLFHIGWLIWAQK 60
Query: 71 IADFLRAGCEVTILFADLHAYL-DNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKF 129
+ D + G +++IL A HA++ D + + + L +Y E +L + V +SK++
Sbjct: 61 LKDLVDVGVDMSILVATWHAWINDKLGGNLDKIKLAGQYAIE----VLNAYGVDMSKVRI 116
Query: 130 VKGTDYQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLL--SGLLYPGLQALDEE 187
V D Y V R++ + K+A + ++ E L S L+YP +Q D
Sbjct: 117 VYAEDLVKDSNYWALVIRIAKNTSLARMKRALTIMGRKAEEAELDTSKLIYPAMQVADIL 176
Query: 188 YLKVDAQFGGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGG-------------- 233
Y +D GG DQRK LA +LG K I P++ GL GG
Sbjct: 177 YQDLDIALGGTDQRKAHMLARDVSDKLGKKKVIAIHTPLLIGLQGGQRMEGVEEDDYLAS 236
Query: 234 -KMSSSEEDSKIDLLDAPALVKKKLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVI 292
KMS S+ ++ I + D P +V+ KL+ A+C G V DN VL K+++F+ K L +
Sbjct: 237 VKMSKSKPETAIFVHDPPEVVEAKLRSAYCPKGVVIDNPVLQINKYIIFA--KDNATLKV 294
Query: 293 TRDENNGGNLNFSDYQSLEQVFAKQELHPADLKAAAEFYINRLLEPIRKKFESK 346
RD GG++ F Y+ LE+++++ +LHP DLK A +N +L+PIRKK ESK
Sbjct: 295 ERDIKYGGDIEFKSYEELEKIYSEGKLHPLDLKLATARKLNEILDPIRKKLESK 348
>sp|O54873|AIMP1_CRIGR Aminoacyl tRNA synthase complex-interacting multifunctional protein
1 OS=Cricetulus griseus GN=AIMP1 PE=2 SV=1
Length = 359
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 110/153 (71%), Gaps = 5/153 (3%)
Query: 361 PVVESDIIAPHRLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVKEGDM 420
P +S + RLD+R+G+IV V +HPDA++LYVE++D+GE PRT++SGLVN+V M
Sbjct: 190 PSADSKPVDVSRLDLRIGRIVTVKKHPDADSLYVEEVDVGEAAPRTVISGLVNHVPLDQM 249
Query: 421 ANRLVVVLCNLKPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVEGYET 480
NR+VV+LCNLKPAKMRGI S MV+CAS E KVE L P S GD+I + +
Sbjct: 250 QNRMVVLLCNLKPAKMRGILSQAMVMCASSPE----KVEILAPPNGSVPGDRITFDAF-P 304
Query: 481 GAPDEILNPKKKVWEKLQVDLKTSSEGIAQWQG 513
G PD+ LNPKKK+WE++Q DL T++E +A ++G
Sbjct: 305 GEPDKELNPKKKIWEQIQPDLHTNAECVATYKG 337
>sp|B9LTA6|SYY_HALLT Tyrosine--tRNA ligase OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=tyrS PE=3 SV=1
Length = 328
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 171/330 (51%), Gaps = 22/330 (6%)
Query: 26 ITRNLQEFLGEDRLNVILKERDLK-IYWGTATTGRPHIAYFVPMSKIADFLRAGCEVTIL 84
ITRN E + E+ + + + D K Y G +G HI + + +K+ D AG EVT+L
Sbjct: 7 ITRNAAEVVTEEEIEAMADDPDGKRAYVGYEPSGVLHIGHMLTANKLIDLQEAGFEVTVL 66
Query: 85 FADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLSKEYTLD 144
AD+HAYL N K +E + ++ E ++ + + S +FV G+D+QL +YTLD
Sbjct: 67 LADVHAYL-NDKGSFEEI----RHTAERMRDQFIAYGLDESNTQFVLGSDFQLDDDYTLD 121
Query: 145 VYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIF 204
++ L T A++A AE+ + +S +YP +QALD YL VD GG++QRK+
Sbjct: 122 LHSLELETTLARAERAMAEITSG-DSVKVSQAVYPLMQALDIPYLGVDLAVGGMEQRKVH 180
Query: 205 TLAEKYLPQLGYAKRIHFMNPMVP--GLAGGKMSSSEEDSKIDLLDAPALVKKKLKKAFC 262
LA LP + P++ G GKMSSSE I + D+ ++ K+ A+C
Sbjct: 181 MLARDVLPSIDREPPTSLHTPLIADLGTGRGKMSSSE-GVTISMEDSREDIESKVNDAYC 239
Query: 263 ------EP---GNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQV 313
EP G +N VL ++ VF + +V+ R E GG+L + Y +LE
Sbjct: 240 PRTADPEPTDDGQSRENPVLQVFEYHVFPRF---DTVVVERPEEYGGDLEYDSYDALEAE 296
Query: 314 FAKQELHPADLKAAAEFYINRLLEPIRKKF 343
ELHPAD K A Y+NRL+ P R++
Sbjct: 297 LESGELHPADAKGALAEYLNRLIAPGREQL 326
>sp|P95982|SYY_SULSO Tyrosine--tRNA ligase OS=Sulfolobus solfataricus (strain ATCC 35092
/ DSM 1617 / JCM 11322 / P2) GN=tyrS PE=3 SV=1
Length = 366
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 179/362 (49%), Gaps = 32/362 (8%)
Query: 17 LSFDEKKQLITRNLQEFLGEDRLNVILK-ERDLKIYWGTATTGRPHIAYFVPMSKIADFL 75
+S D++ QLI RN E + D L L+ + LK Y G +G HI + + K+ D +
Sbjct: 6 MSIDQRLQLIMRNTAEVITIDELRKKLESDEKLKGYIGFEPSGLFHIGWLIWTQKVKDLV 65
Query: 76 RAGCEVTILFADLHAYL-DNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTD 134
AG +T+L A HA++ D + L+ + Y E IK + V + KL V D
Sbjct: 66 EAGINMTLLRAAWHAWINDKLGGDMNLIKMAADYAVEVIK----NYGVDVGKLNIVDADD 121
Query: 135 YQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLL--SGLLYPGLQALDEEYLKVD 192
K+Y V +++ + K+A + ++ E + S L+YP +Q D YL +D
Sbjct: 122 IVKEKDYWALVIKVAKNASLARIKRALTIMGRRAEEAEIDASKLIYPAMQVSDIFYLDLD 181
Query: 193 AQFGGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGG------------------K 234
GG DQRK LA ++G K + P++ GL GG K
Sbjct: 182 IALGGTDQRKAHMLARDVAEKMGKKKIVSIHTPLLVGLQGGQRMNITEGMEEDDIQAEIK 241
Query: 235 MSSSEEDSKIDLLDAPALVKKKLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLV-IT 293
MS S+ +S I + D+ V++K+ A+C G E+N +L LK+++F P N V I
Sbjct: 242 MSKSKPESAIFVNDSREDVERKIMGAYCPKGVAENNPILQILKYIIF----PRYNFVKIE 297
Query: 294 RDENNGGNLNFSDYQSLEQVFAKQELHPADLKAAAEFYINRLLEPIRKKFESK-ELKDLT 352
RD GG++ F DY+ LE+ + + ++HP DLK +N +LEPIRK E K E +++
Sbjct: 298 RDIKYGGDVEFKDYEELERTYIEGKIHPMDLKKTTARKLNEILEPIRKSLEKKPEFEEMI 357
Query: 353 SK 354
K
Sbjct: 358 QK 359
>sp|O27795|SYY_METTH Tyrosine--tRNA ligase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=tyrS PE=3 SV=1
Length = 319
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 175/327 (53%), Gaps = 9/327 (2%)
Query: 19 FDEKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLRAG 78
D+ + ITR++ E + + L +LK+ + +Y G +GR H+ + + + K+ + AG
Sbjct: 1 MDDSLKTITRDVLEVITPEELMDVLKKDEPVVYTGYEPSGRIHLGHALTVRKLRELQDAG 60
Query: 79 CEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQLS 138
V IL AD HAYL N K E + Y ++ A+ S + + +F+ G+ +Q
Sbjct: 61 FRVKILLADYHAYL-NGKGSMERIRELADYNQKCFLALGLSPE----RTEFILGSSFQTE 115
Query: 139 KEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGV 198
EYT VYRL+ + T AK++ A++ ++ ++ ++YP +Q +D YL VD GG+
Sbjct: 116 PEYTDLVYRLALITTLLRAKRSMAQITRESRDHKVAEVIYPLMQVIDMVYLGVDVALGGM 175
Query: 199 DQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKKLK 258
+QRKI LA + LP+LG+ + P++ G G + SS + + I + D+P +++K+K
Sbjct: 176 EQRKIHMLARENLPRLGFDAPVCIHTPLLHGTDGSEKMSSSKGNFIAVDDSPDEIREKVK 235
Query: 259 KAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQE 318
K++C G E N ++ +K+ + P ++ R G + L ++++ E
Sbjct: 236 KSYCPMGETEGNPIIEIVKYFIM----PEYGMMTIRRPEKFGGDLELELDELLEMYSSSE 291
Query: 319 LHPADLKAAAEFYINRLLEPIRKKFES 345
LHP DLK A Y+ +LEP+R+ E
Sbjct: 292 LHPLDLKNAVSDYLVDMLEPVREYMEG 318
>sp|P31230|AIMP1_MOUSE Aminoacyl tRNA synthase complex-interacting multifunctional protein
1 OS=Mus musculus GN=Aimp1 PE=1 SV=2
Length = 310
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 107/151 (70%), Gaps = 5/151 (3%)
Query: 363 VESDIIAPHRLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVKEGDMAN 422
+S I RLD+R+G IV +HPDA++LYVE++D+GE PRT+VSGLVN+V M N
Sbjct: 143 TDSKPIDASRLDLRIGCIVTAKKHPDADSLYVEEVDVGEAAPRTVVSGLVNHVPLEQMQN 202
Query: 423 RLVVVLCNLKPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVEGYETGA 482
R+VV+LCNLKPAKMRG+ S MV+CAS E KVE L P S GD+I + + G
Sbjct: 203 RMVVLLCNLKPAKMRGVLSQAMVMCASSPE----KVEILAPPNGSVPGDRITFDAF-PGE 257
Query: 483 PDEILNPKKKVWEKLQVDLKTSSEGIAQWQG 513
PD+ LNPKKK+WE++Q DL T++E +A ++G
Sbjct: 258 PDKELNPKKKIWEQIQPDLHTNAECVATYKG 288
>sp|Q12904|AIMP1_HUMAN Aminoacyl tRNA synthase complex-interacting multifunctional protein
1 OS=Homo sapiens GN=AIMP1 PE=1 SV=2
Length = 312
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 103/143 (72%), Gaps = 5/143 (3%)
Query: 372 RLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVKEGDMANRLVVVLCNL 431
RLD+R+G I+ +HPDA++LYVE++D+GE PRT+VSGLVN+V M NR+V++LCNL
Sbjct: 154 RLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNL 213
Query: 432 KPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVEGYETGAPDEILNPKK 491
KPAKMRG+ S MV+CAS E K+E L P S GD+I + + G PD+ LNPKK
Sbjct: 214 KPAKMRGVLSQAMVMCASSPE----KIEILAPPNGSVPGDRITFDAF-PGEPDKELNPKK 268
Query: 492 KVWEKLQVDLKTSSEGIAQWQGF 514
K+WE++Q DL T+ E +A ++G
Sbjct: 269 KIWEQIQPDLHTNDECVATYKGV 291
>sp|Q2NHE1|SYY_METST Tyrosine--tRNA ligase OS=Methanosphaera stadtmanae (strain DSM
3091) GN=tyrS PE=3 SV=1
Length = 318
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 172/329 (52%), Gaps = 12/329 (3%)
Query: 17 LSFDEKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLR 76
+ D + I+++ E + + L +LK+ + + Y G +G+ H+ + + + K+
Sbjct: 1 MDIDASVENISKDTAEIIEVEELKELLKKDEKRAYVGFEPSGKVHLGHALTIKKMKTLQD 60
Query: 77 AGCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQ 136
AG ++TI A+LHAYL+N K + L KY + KA+ S D F+ G+D +
Sbjct: 61 AGFKITIFIANLHAYLNN-KGTLDELNEVAKYNIKCFKALGLSEDT-----NFILGSD-R 113
Query: 137 LSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFG 196
++ EY +V++ + + T A+++ A V + H + + LYP +QALD L D G
Sbjct: 114 MTPEYITEVFKAAKLTTIQRAQRSMALVSRNETHDV-AQTLYPIMQALDIHDLDADIAVG 172
Query: 197 GVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKK 256
G++QRKI LA + LP+LGY + P++ G G SS + + I + D P +K K
Sbjct: 173 GMEQRKIHMLAREILPRLGYRPPVCIHIPLIHGTDGSDKMSSSKGNFIAIDDTPKEIKNK 232
Query: 257 LKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAK 316
+ K+FC G EDN V+ + +F E ++I R E GGNL ++ + L Q +
Sbjct: 233 INKSFCPIGVSEDNPVMEIAHYYIFD---THEKILIERPEKFGGNLELTE-EELIQTYEN 288
Query: 317 QELHPADLKAAAEFYINRLLEPIRKKFES 345
++LHP DLK Y+ L P R+ E+
Sbjct: 289 EDLHPMDLKNTVSKYLIERLAPAREYMEN 317
>sp|Q9HN62|SYY_HALSA Tyrosine--tRNA ligase OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=tyrS PE=3 SV=1
Length = 327
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 165/301 (54%), Gaps = 16/301 (5%)
Query: 49 KIYWGTATTGRPHIAYFVPMSKIADFLRAGCEVTILFADLHAYLDNMKAPWELLALRTKY 108
++Y G +G H+ + + +K+ D AG EV +L AD+HAYL++ + E+ A
Sbjct: 31 RVYVGYEPSGVLHLGHLLTANKLMDLQDAGMEVVVLLADVHAYLNDKGSFEEIRATA--- 87
Query: 109 YEESIKAMLESIDVPISKLKFVKGTDYQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQV 168
+ +KA + + + +FV G+ +QL ++Y LD++ + + A++A AE+ +
Sbjct: 88 --DQMKAQFLAYGLDEDQTEFVLGSSFQLDEDYELDLHAMQVETSLKRAQRAMAEI-QSG 144
Query: 169 EHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVP 228
E P +S ++YP +QALD EYL +D GG+DQRK+ LA + LP +GY KR P++
Sbjct: 145 ETPKVSHVVYPLMQALDIEYLDLDLAIGGMDQRKVHMLAREELPSVGYEKRPVLHTPIIG 204
Query: 229 --GLAGGKMSSSEEDSKIDLLDAPALVKKKLKKAFC----EPGNVEDNGVLSFLKHVVFS 282
G GKMSSS E I + D+ A +++K+ AFC +P N VL ++ VF
Sbjct: 205 DLGSGDGKMSSS-EGVTISMEDSTADIEEKVTGAFCPQTRDPEGETVNPVLELFQYHVFP 263
Query: 283 LLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQELHPADLKAAAEFYINRLLEPIRKK 342
+ +V+ R + GG+L + Y+ L ELHPAD K A ++ L+EP R++
Sbjct: 264 RF---DEVVVQRPDEYGGDLVYESYEDLADDLESGELHPADAKGALAAALDELIEPGRQR 320
Query: 343 F 343
Sbjct: 321 L 321
>sp|B0R7E0|SYY_HALS3 Tyrosine--tRNA ligase OS=Halobacterium salinarum (strain ATCC 29341
/ DSM 671 / R1) GN=tyrS PE=3 SV=1
Length = 327
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 165/301 (54%), Gaps = 16/301 (5%)
Query: 49 KIYWGTATTGRPHIAYFVPMSKIADFLRAGCEVTILFADLHAYLDNMKAPWELLALRTKY 108
++Y G +G H+ + + +K+ D AG EV +L AD+HAYL++ + E+ A
Sbjct: 31 RVYVGYEPSGVLHLGHLLTANKLMDLQDAGMEVVVLLADVHAYLNDKGSFEEIRATA--- 87
Query: 109 YEESIKAMLESIDVPISKLKFVKGTDYQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQV 168
+ +KA + + + +FV G+ +QL ++Y LD++ + + A++A AE+ +
Sbjct: 88 --DQMKAQFLAYGLDEDQTEFVLGSSFQLDEDYELDLHAMQVETSLKRAQRAMAEI-QSG 144
Query: 169 EHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVP 228
E P +S ++YP +QALD EYL +D GG+DQRK+ LA + LP +GY KR P++
Sbjct: 145 ETPKVSHVVYPLMQALDIEYLDLDLAIGGMDQRKVHMLAREELPSVGYEKRPVLHTPIIG 204
Query: 229 --GLAGGKMSSSEEDSKIDLLDAPALVKKKLKKAFC----EPGNVEDNGVLSFLKHVVFS 282
G GKMSSS E I + D+ A +++K+ AFC +P N VL ++ VF
Sbjct: 205 DLGSGDGKMSSS-EGVTISMEDSTADIEEKVTGAFCPQTRDPEGETVNPVLELFQYHVFP 263
Query: 283 LLKPGENLVITRDENNGGNLNFSDYQSLEQVFAKQELHPADLKAAAEFYINRLLEPIRKK 342
+ +V+ R + GG+L + Y+ L ELHPAD K A ++ L+EP R++
Sbjct: 264 RF---DEVVVQRPDEYGGDLVYESYEDLADDLESGELHPADAKGALAAALDELIEPGRQR 320
Query: 343 F 343
Sbjct: 321 L 321
>sp|A5UKJ0|SYY_METS3 Tyrosine--tRNA ligase OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=tyrS PE=3 SV=1
Length = 319
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 174/328 (53%), Gaps = 10/328 (3%)
Query: 17 LSFDEKKQLITRNLQEFLGEDRLNVILKERDLKIYWGTATTGRPHIAYFVPMSKIADFLR 76
+S +EK QLI + E + + L +LK+ Y G +G+ H+ + V + K+ +
Sbjct: 1 MSIEEKIQLIEKGTLEVIDTEELKEVLKKEQPIAYTGYEPSGKIHLGHAVTVQKLKTLQK 60
Query: 77 AGCEVTILFADLHAYLDNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTDYQ 136
G ++ IL AD HA+L N K E +A +Y + KA+ +D +F+ G+ +Q
Sbjct: 61 LGFKIKILLADFHAFL-NGKGSIEEIAETAEYNMKCFKAL--GLD---ETTEFILGSSFQ 114
Query: 137 LSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFG 196
L+++Y VY+L+++ T A+++ +V + E+P ++ ++YP +Q +D L VD G
Sbjct: 115 LNEDYASKVYKLATLTTLKRARRSMDQVSRHDENPKVASVVYPIMQTVDMVALDVDVALG 174
Query: 197 GVDQRKIFTLAEKYLPQLGYAKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDAPALVKKK 256
G++QRKI LA + L ++ + P++ GL G SS + + I + D+ + KK
Sbjct: 175 GMEQRKIQMLARENLEKIDEKVPVCIHTPLLHGLDGDAKMSSSKGNYIAVDDSVEEITKK 234
Query: 257 LKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRDENNGGNLNFSDYQSLEQVFAK 316
+KK++C G E N ++ + V+ E L+I R E GG++ + ++ L F+
Sbjct: 235 IKKSYCPQGETEGNPMIEIAETFVYP---NQETLLIKRPEKFGGDIELT-HEQLINDFSN 290
Query: 317 QELHPADLKAAAEFYINRLLEPIRKKFE 344
+LHP DLK + ++ P+R+ E
Sbjct: 291 GDLHPMDLKNGIKDFLIEHFAPVREYME 318
>sp|Q9SVN5|SYM_ARATH Probable methionine--tRNA ligase OS=Arabidopsis thaliana
GN=At4g13780 PE=2 SV=1
Length = 797
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 104/156 (66%), Gaps = 4/156 (2%)
Query: 357 PPKKPVVESDIIAPHRLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVK 416
P +P + +I RLDIRVGKIV+ +HP A+ALYVE+ID+G RT+VSGLV Y+
Sbjct: 624 PKPQPAADREITMA-RLDIRVGKIVKAEKHPKADALYVEEIDVGGGEIRTVVSGLVKYIP 682
Query: 417 EGDMANRLVVVLCNLKPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVE 476
+M NR+V VLCNLKPAKMR I S MVL AS + KVE + P ++ G+++
Sbjct: 683 LEEMQNRMVCVLCNLKPAKMRDIVSQAMVLAASSSD--GSKVELVEPPKTANIGERVTFP 740
Query: 477 GYETGAPDEILNPKKKVWEKLQVDLKTSSEGIAQWQ 512
G+E G PD++LNPKKKVWE L VDL T +A ++
Sbjct: 741 GFE-GEPDDVLNPKKKVWETLLVDLNTKENLVACYK 775
>sp|Q9ZTS1|SYM_ORYSJ Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica
GN=Os06g0508700 PE=2 SV=2
Length = 801
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 98/141 (69%), Gaps = 3/141 (2%)
Query: 372 RLDIRVGKIVEVSRHPDAEALYVEKIDLGEENPRTIVSGLVNYVKEGDMANRLVVVLCNL 431
+LDIRVG I + +HPDA++LYVE+ID+GEE PRT+VSGLV ++ +M NR V VLCNL
Sbjct: 642 KLDIRVGLIRKAQKHPDADSLYVEEIDVGEEAPRTVVSGLVKFIPLEEMQNRKVCVLCNL 701
Query: 432 KPAKMRGIESAGMVLCASVEEEGNKKVEPLFVPPSSKAGDKIVVEGYETGAPDEILNPKK 491
KP MRGI+S MVL AS E+ + KVE + P S+ G+++ GY +G P+ LN K
Sbjct: 702 KPVAMRGIKSHAMVLAASNED--HTKVELVEPPESAAVGERVTFAGY-SGEPEASLNAKS 758
Query: 492 KVWEKLQVDLKTSSEGIAQWQ 512
K WEKL DL ++ E +A ++
Sbjct: 759 KTWEKLSADLHSNGELVACYK 779
>sp|Q9YA64|SYY_AERPE Tyrosine--tRNA ligase OS=Aeropyrum pernix (strain ATCC 700893 / DSM
11879 / JCM 9820 / NBRC 100138 / K1) GN=tyrS PE=1 SV=1
Length = 364
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 172/345 (49%), Gaps = 27/345 (7%)
Query: 17 LSFDEKKQLITRNLQEFLGEDRLNVILKE-RDLKIYWGTATTGRPHIAYFVPMSKIADFL 75
+ +E+ I RN E + E+ L +L +K Y G +G HI + V M K+ D +
Sbjct: 4 VDVEERFNRIARNTVEIVTEEELKGLLASGARIKGYIGYEPSGVAHIGWLVWMYKVKDLV 63
Query: 76 RAGCEVTILFADLHAYL-DNMKAPWELLALRTKYYEESIKAMLESIDVPISKLKFVKGTD 134
AG + ++L A HAY+ D + +L+ + ++ ++E+ VP+ +++FV +
Sbjct: 64 EAGVDFSVLEATWHAYINDKLGGDMDLIRAAARI----VRRVMEAAGVPVERVRFVDAEE 119
Query: 135 YQLSKEYTLDVYRLSSVITEHDAKKAGAEVVKQVEHPLL--SGLLYPGLQALDEEYLKVD 192
K+Y V R++ + ++A + ++ E + S L+YP +Q D Y+ +D
Sbjct: 120 LASDKDYWGLVIRVAKRASLARVRRALTIMGRRAEEAEVDASKLIYPLMQVSDIFYMDLD 179
Query: 193 AQFGGVDQRKIFTLAEKYLPQLGYAKRIHFMNPMV-----PG------------LAGGKM 235
GG+DQRK LA +LG K + P++ PG LA KM
Sbjct: 180 IALGGMDQRKAHMLARDVAEKLGRKKPVAIHTPIISSLQGPGRMEASQGEIDDVLAEVKM 239
Query: 236 SSSEEDSKIDLLDAPALVKKKLKKAFCEPGNVEDNGVLSFLKHVVFSLLKPGENLVITRD 295
S S+ ++ + ++D+ +++K++KA+C V+ N VL ++++F+ + G L + R
Sbjct: 240 SKSKPETAVFVVDSDDDIRRKIRKAYCPAKQVQGNPVLEIARYILFA--RDGFTLRVDRP 297
Query: 296 ENNGGNLNFSDYQSLEQVFAKQELHPADLKAAAEFYINRLLEPIR 340
GG + ++ Y+ LE+ + LHP DLK A + ++ PIR
Sbjct: 298 AKYGGPVEYTSYEELERDYTDGRLHPLDLKNAVAESLIEVVRPIR 342
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,275,278
Number of Sequences: 539616
Number of extensions: 9265144
Number of successful extensions: 26718
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 300
Number of HSP's that attempted gapping in prelim test: 25570
Number of HSP's gapped (non-prelim): 991
length of query: 549
length of database: 191,569,459
effective HSP length: 123
effective length of query: 426
effective length of database: 125,196,691
effective search space: 53333790366
effective search space used: 53333790366
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)