BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy5960
         (121 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|328721273|ref|XP_001945941.2| PREDICTED: matrix metalloproteinase-17-like [Acyrthosiphon pisum]
          Length = 642

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 73/93 (78%)

Query: 1   MTLKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           +T     +R+   D G +R +L +A  VW+K+SKLTFREVN + ADIL++FEK  H DGY
Sbjct: 142 LTWSLRTRRLDKVDHGWVRSDLNKAFQVWAKYSKLTFREVNSESADILVFFEKGYHGDGY 201

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           PFDGPG++LAHAFFPG+GRGGDAHFD +E+W+V
Sbjct: 202 PFDGPGQVLAHAFFPGTGRGGDAHFDEEEEWLV 234


>gi|328783162|ref|XP_001120736.2| PREDICTED: matrix metalloproteinase-25-like [Apis mellifera]
          Length = 419

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/102 (59%), Positives = 74/102 (72%), Gaps = 4/102 (3%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D G +R EL RALD+W+++SKLTF+EVN DRADIL+YF +  H DGYPFDG G+ILAHAF
Sbjct: 132 DTGGVRFELSRALDLWARNSKLTFQEVNSDRADILVYFHRGYHGDGYPFDGRGQILAHAF 191

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           FPG  RGGD HFD +E W++ G     N +EG SL    A E
Sbjct: 192 FPGRDRGGDVHFDEEEIWLLQG----DNNEEGTSLFAVAAHE 229


>gi|307207361|gb|EFN85111.1| Matrix metalloproteinase-25 [Harpegnathos saltator]
          Length = 282

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/102 (57%), Positives = 74/102 (72%), Gaps = 4/102 (3%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D G +R EL +AL++W+++S+LTFREVN DRADILIYF +  H DGYPFDG G+ILAHAF
Sbjct: 15  DTGGVRLELSKALNLWARNSRLTFREVNSDRADILIYFHRGYHGDGYPFDGRGQILAHAF 74

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           FPG  RGGDAHFD +E W++    +    +EG SL    A E
Sbjct: 75  FPGKDRGGDAHFDEEEIWLL----QDDTNEEGTSLFAVAAHE 112


>gi|383861584|ref|XP_003706265.1| PREDICTED: matrix metalloproteinase-24-like [Megachile rotundata]
          Length = 595

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/102 (57%), Positives = 75/102 (73%), Gaps = 4/102 (3%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D G +R EL RALD+W+++SKLTF+EVN DRADIL+YF +  H DGYPFDG G+ILAHAF
Sbjct: 118 DTGGVRFELSRALDLWARNSKLTFQEVNSDRADILVYFHRRYHGDGYPFDGRGQILAHAF 177

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           FPG  +GGDAHFD +E W++    +  + +EG SL    A E
Sbjct: 178 FPGKDQGGDAHFDEEEIWLL----QDDSNEEGTSLFAVAAHE 215


>gi|332027325|gb|EGI67409.1| Matrix metalloproteinase-25 [Acromyrmex echinatior]
          Length = 183

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 4/102 (3%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D G +R EL +ALD+W+++SKLTF+E+N D ADIL+YF +  H DGYPFDG G+ILAHAF
Sbjct: 35  DTGGVRLELSKALDLWARNSKLTFQEINSDHADILVYFHRGYHGDGYPFDGRGQILAHAF 94

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           FPG  RGGDAHFD +E W++       + +EG SL    A E
Sbjct: 95  FPGKDRGGDAHFDEEEIWLL----EDESNEEGTSLFAVAAHE 132


>gi|345480289|ref|XP_003424120.1| PREDICTED: matrix metalloproteinase-24-like isoform 2 [Nasonia
           vitripennis]
 gi|345480291|ref|XP_001607648.2| PREDICTED: matrix metalloproteinase-24-like isoform 1 [Nasonia
           vitripennis]
          Length = 672

 Score =  114 bits (286), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 63/115 (54%), Positives = 77/115 (66%), Gaps = 4/115 (3%)

Query: 1   MTLKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           +T     +R    + G +R EL RALDVW+K+SKLTF E+N D ADILI F +  H DGY
Sbjct: 140 LTWSLRTERPSGLETGGVRRELARALDVWAKNSKLTFHEINSDAADILISFHRGYHGDGY 199

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           PFDG G+ILAHAFFPGS RGGDAHFD +E+W +     S+  D+G SL    A E
Sbjct: 200 PFDGRGQILAHAFFPGSDRGGDAHFDEEEEWTL----DSSGNDDGTSLFAVAAHE 250


>gi|350398989|ref|XP_003485375.1| PREDICTED: matrix metalloproteinase-15-like [Bombus impatiens]
          Length = 645

 Score =  114 bits (286), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 59/102 (57%), Positives = 73/102 (71%), Gaps = 3/102 (2%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D G +R EL RALD+W+++SKLTF+EVN DRADIL+YF   +H DGYPFDG G+ILAHAF
Sbjct: 132 DTGGVRFELSRALDLWARNSKLTFQEVNSDRADILVYFHSGHHGDGYPFDGRGQILAHAF 191

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           FPG  RGGD HFD +E W+   +    + +EG SL    A E
Sbjct: 192 FPGRDRGGDVHFDEEEIWL---LQDDNSNEEGTSLFAVAAHE 230


>gi|242002936|ref|XP_002422548.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212505338|gb|EEB09810.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 566

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/105 (57%), Positives = 71/105 (67%), Gaps = 1/105 (0%)

Query: 11  RHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILA 70
           R+ D G++R  L  AL+VW+KHSKLTF+E+N DRADIL+YF    H DGY FDG G++LA
Sbjct: 92  RNLDGGQVRGVLYHALEVWAKHSKLTFQELNSDRADILVYFHSGYHGDGYAFDGRGQVLA 151

Query: 71  HAFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           HAFFPG  RGGDAHFD DE W +L         EG SL    A E
Sbjct: 152 HAFFPGKERGGDAHFDEDEVW-ILDPYADLEQIEGTSLFAVAAHE 195


>gi|322789997|gb|EFZ15073.1| hypothetical protein SINV_02809 [Solenopsis invicta]
          Length = 158

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/102 (53%), Positives = 74/102 (72%), Gaps = 4/102 (3%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D G +R +L +AL++W+++S+LTF+E+N DRADIL+YF +  H DGYPFDG G+ILAHAF
Sbjct: 10  DTGGVRLQLSKALNLWARNSRLTFQEINSDRADILVYFHRGYHGDGYPFDGRGQILAHAF 69

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           FPG  RGGDAHFD +E W++       + +EG SL    A E
Sbjct: 70  FPGKDRGGDAHFDEEEIWLL----EDESNEEGTSLFAVAAHE 107


>gi|198460006|ref|XP_002138767.1| GA24215 [Drosophila pseudoobscura pseudoobscura]
 gi|198136874|gb|EDY69325.1| GA24215 [Drosophila pseudoobscura pseudoobscura]
          Length = 713

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/100 (54%), Positives = 67/100 (67%), Gaps = 5/100 (5%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D G++R  + RAL+VW  +SKLTFREV  D+ADI + F +  H DGY FDGPG++LAHAF
Sbjct: 178 DAGKIRMMVSRALNVWENNSKLTFREVYSDQADIQVLFARLQHGDGYKFDGPGQVLAHAF 237

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANA 113
           +PG GRGGDAHFD DE W   G     NAD+ +     N 
Sbjct: 238 YPGEGRGGDAHFDADEIWNFDG-----NADDSRGTNFLNV 272


>gi|195153621|ref|XP_002017723.1| GL17329 [Drosophila persimilis]
 gi|194113519|gb|EDW35562.1| GL17329 [Drosophila persimilis]
          Length = 711

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/100 (54%), Positives = 67/100 (67%), Gaps = 5/100 (5%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D G++R  + RAL+VW  +SKLTFREV  D+ADI + F +  H DGY FDGPG++LAHAF
Sbjct: 178 DAGKIRMMVSRALNVWENNSKLTFREVYSDQADIQVLFARLQHGDGYKFDGPGQVLAHAF 237

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANA 113
           +PG GRGGDAHFD DE W   G     NAD+ +     N 
Sbjct: 238 YPGEGRGGDAHFDADEIWNFDG-----NADDSRGTNFLNV 272


>gi|195581946|ref|XP_002080790.1| GD10060 [Drosophila simulans]
 gi|194192799|gb|EDX06375.1| GD10060 [Drosophila simulans]
          Length = 221

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/84 (60%), Positives = 61/84 (72%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D  ++   ++ ALDVW+ HSKLTFREV  D+ADI I F +  H DGY FDGPG++LAHAF
Sbjct: 32  DASKVERMVQSALDVWANHSKLTFREVYSDQADIQILFARRAHGDGYKFDGPGQVLAHAF 91

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVS 97
           +PG GRGGDAHFD DE W   G S
Sbjct: 92  YPGEGRGGDAHFDADETWNFDGES 115


>gi|60677707|gb|AAX33360.1| SD03462p [Drosophila melanogaster]
          Length = 758

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/84 (60%), Positives = 61/84 (72%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D  ++   ++ ALDVW+ HSKLTFREV  D+ADI I F +  H DGY FDGPG++LAHAF
Sbjct: 160 DASKVERMVQTALDVWANHSKLTFREVYSDQADIQILFARRAHGDGYKFDGPGQVLAHAF 219

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVS 97
           +PG GRGGDAHFD DE W   G S
Sbjct: 220 YPGEGRGGDAHFDADETWNFDGES 243


>gi|45552531|ref|NP_995788.1| matrix metalloproteinase 2, isoform B [Drosophila melanogaster]
 gi|21665775|emb|CAC81969.1| matrix metalloproteinase 2-MMP [Drosophila melanogaster]
 gi|45445620|gb|AAS64885.1| matrix metalloproteinase 2, isoform B [Drosophila melanogaster]
          Length = 758

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/84 (60%), Positives = 61/84 (72%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D  ++   ++ ALDVW+ HSKLTFREV  D+ADI I F +  H DGY FDGPG++LAHAF
Sbjct: 160 DASKVERMVQTALDVWANHSKLTFREVYSDQADIQILFARRAHGDGYKFDGPGQVLAHAF 219

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVS 97
           +PG GRGGDAHFD DE W   G S
Sbjct: 220 YPGEGRGGDAHFDADETWNFDGES 243


>gi|442623036|ref|NP_001260830.1| matrix metalloproteinase 2, isoform C [Drosophila melanogaster]
 gi|440214230|gb|AGB93363.1| matrix metalloproteinase 2, isoform C [Drosophila melanogaster]
          Length = 606

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 51/84 (60%), Positives = 61/84 (72%)

Query: 14 DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
          D  ++   ++ ALDVW+ HSKLTFREV  D+ADI I F +  H DGY FDGPG++LAHAF
Sbjct: 8  DASKVERMVQTALDVWANHSKLTFREVYSDQADIQILFARRAHGDGYKFDGPGQVLAHAF 67

Query: 74 FPGSGRGGDAHFDIDEDWMVLGVS 97
          +PG GRGGDAHFD DE W   G S
Sbjct: 68 YPGEGRGGDAHFDADETWNFDGES 91


>gi|195056285|ref|XP_001995042.1| GH22855 [Drosophila grimshawi]
 gi|193899248|gb|EDV98114.1| GH22855 [Drosophila grimshawi]
          Length = 764

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 49/78 (62%), Positives = 59/78 (75%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D G++R  + RAL VW  HSKLTFREV   +ADI + F + +H DGY FDGPG +LAHAF
Sbjct: 208 DVGKIRKLISRALLVWENHSKLTFREVYSSQADIQVMFVRGDHGDGYKFDGPGLVLAHAF 267

Query: 74  FPGSGRGGDAHFDIDEDW 91
           +PG GRGGDAHFD DE+W
Sbjct: 268 YPGVGRGGDAHFDADENW 285


>gi|442623038|ref|NP_610511.3| matrix metalloproteinase 2, isoform D [Drosophila melanogaster]
 gi|440214231|gb|AAF58911.6| matrix metalloproteinase 2, isoform D [Drosophila melanogaster]
          Length = 650

 Score =  107 bits (268), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 49/78 (62%), Positives = 59/78 (75%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D  ++   ++ ALDVW+ HSKLTFREV  D+ADI I F +  H DGY FDGPG++LAHAF
Sbjct: 52  DASKVERMVQTALDVWANHSKLTFREVYSDQADIQILFARRAHGDGYKFDGPGQVLAHAF 111

Query: 74  FPGSGRGGDAHFDIDEDW 91
           +PG GRGGDAHFD DE W
Sbjct: 112 YPGEGRGGDAHFDADETW 129


>gi|195332885|ref|XP_002033123.1| GM20587 [Drosophila sechellia]
 gi|194125093|gb|EDW47136.1| GM20587 [Drosophila sechellia]
          Length = 776

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/84 (59%), Positives = 60/84 (71%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D  ++   ++ ALDVW+ HSKLTFREV  D+ADI I F +  H DGY FDGPG++LAHAF
Sbjct: 166 DASKVERMVQSALDVWASHSKLTFREVYSDQADIQILFARRAHGDGYKFDGPGQVLAHAF 225

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVS 97
           +P  GRGGDAHFD DE W   G S
Sbjct: 226 YPSEGRGGDAHFDADETWNFDGES 249


>gi|195431910|ref|XP_002063971.1| GK15621 [Drosophila willistoni]
 gi|194160056|gb|EDW74957.1| GK15621 [Drosophila willistoni]
          Length = 632

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/76 (61%), Positives = 59/76 (77%)

Query: 16  GRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFP 75
           G++R  + RAL VW  +SKLTFREV  D+ADI + F + +H DGY FDGPG++LAHAF+P
Sbjct: 109 GQIRQMVTRALRVWENNSKLTFREVYSDQADIQVLFARRDHGDGYKFDGPGQVLAHAFYP 168

Query: 76  GSGRGGDAHFDIDEDW 91
           G GRGGDAHFD +E W
Sbjct: 169 GVGRGGDAHFDAEETW 184


>gi|195124519|ref|XP_002006740.1| GI21232 [Drosophila mojavensis]
 gi|193911808|gb|EDW10675.1| GI21232 [Drosophila mojavensis]
          Length = 709

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/84 (58%), Positives = 61/84 (72%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D  ++R  + RAL VW  +SKLTFREV  D+ADI + F + +H DGY FDGPG++LAHAF
Sbjct: 148 DANKIRTMVSRALRVWETNSKLTFREVYSDQADIQVLFARRDHGDGYKFDGPGQVLAHAF 207

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVS 97
           +PG GRGGDAHFD +E W   G S
Sbjct: 208 YPGVGRGGDAHFDAEETWEFDGSS 231


>gi|357616003|gb|EHJ69947.1| matrix metalloproteinase 2 [Danaus plexippus]
          Length = 541

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/102 (54%), Positives = 67/102 (65%), Gaps = 5/102 (4%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           +R    D    R  L RALD+W + S+LTF E+N D ADI++ F K  H D YPFDG G 
Sbjct: 41  RRPSQLDPHGTRSVLARALDIWEQASRLTFTEINSDEADIVVSFAKRYHDDAYPFDGRGS 100

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSANAD-EGKSL 108
           +LAHAFFPG+GRGGDAHFD DE W++    R  N D EG SL
Sbjct: 101 VLAHAFFPGTGRGGDAHFDDDELWLL----RPNNDDEEGTSL 138


>gi|195381095|ref|XP_002049291.1| GJ20836 [Drosophila virilis]
 gi|194144088|gb|EDW60484.1| GJ20836 [Drosophila virilis]
          Length = 689

 Score =  105 bits (261), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 47/76 (61%), Positives = 59/76 (77%)

Query: 16  GRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFP 75
           G++R  + RAL VW  +SKLTFREV  D+ADI + F + +H DGY FDGPG++LAHAF+P
Sbjct: 126 GKIRMMVARALRVWENNSKLTFREVYSDQADIQVLFARRDHGDGYKFDGPGQVLAHAFYP 185

Query: 76  GSGRGGDAHFDIDEDW 91
           G GRGGDAHFD +E W
Sbjct: 186 GVGRGGDAHFDSEETW 201


>gi|194858381|ref|XP_001969166.1| GG25269 [Drosophila erecta]
 gi|190661033|gb|EDV58225.1| GG25269 [Drosophila erecta]
          Length = 761

 Score =  105 bits (261), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/78 (62%), Positives = 56/78 (71%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D  + R  + RAL VW  HSKLTFREV  D+ADI I F +  H DGY FDGPG++LAHAF
Sbjct: 163 DAYKARMLVTRALSVWEYHSKLTFREVYSDQADIQILFARRQHGDGYQFDGPGQVLAHAF 222

Query: 74  FPGSGRGGDAHFDIDEDW 91
           +P  GRGGDAHFD DE W
Sbjct: 223 YPSEGRGGDAHFDADETW 240


>gi|194756436|ref|XP_001960484.1| GF11488 [Drosophila ananassae]
 gi|190621782|gb|EDV37306.1| GF11488 [Drosophila ananassae]
          Length = 756

 Score =  105 bits (261), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 53/97 (54%), Positives = 63/97 (64%), Gaps = 5/97 (5%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  + RAL VW  +SKLTFREV  D+ADI I F +  H DGY FDGPG++LAHAF+PG
Sbjct: 181 KIRRLVGRALAVWENNSKLTFREVYSDQADIQILFARLQHGDGYKFDGPGQVLAHAFYPG 240

Query: 77  SGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANA 113
            GRGGDAHFD DE W   G     NAD+       N 
Sbjct: 241 EGRGGDAHFDADETWNFDG-----NADDSHGTNFLNV 272


>gi|312372128|gb|EFR20157.1| hypothetical protein AND_20564 [Anopheles darlingi]
          Length = 534

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/80 (58%), Positives = 61/80 (76%)

Query: 14 DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
          D G++R  L  ALD+WS+H+ ++FREV    ADI + F ++ H DGY FDGPGKILAHAF
Sbjct: 5  DAGQVRRILYEALDLWSRHANISFREVYSTEADIQVMFARKFHGDGYNFDGPGKILAHAF 64

Query: 74 FPGSGRGGDAHFDIDEDWMV 93
          +PGSG GGDAHFD +E W++
Sbjct: 65 YPGSGIGGDAHFDEEESWLL 84


>gi|157110199|ref|XP_001650996.1| matrix metalloproteinase [Aedes aegypti]
 gi|108883947|gb|EAT48172.1| AAEL000788-PA [Aedes aegypti]
          Length = 646

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/80 (57%), Positives = 61/80 (76%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D G++R  L  ALD+W++++ LTFREV    ADI + F ++ H DGY FDGPGKILAHAF
Sbjct: 135 DAGQVRRVLHEALDLWAQNANLTFREVYSSEADIQVLFARQFHGDGYKFDGPGKILAHAF 194

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
           +PG+G GGDAHFD +E W++
Sbjct: 195 YPGTGIGGDAHFDEEETWLL 214


>gi|391345050|ref|XP_003746806.1| PREDICTED: 72 kDa type IV collagenase-like [Metaseiulus
           occidentalis]
          Length = 587

 Score =  101 bits (251), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 55/108 (50%), Positives = 66/108 (61%), Gaps = 6/108 (5%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   +R +L RA+ VWSKHSKL F E  D  ADI+I F +  H D YPFDGPG +LAHA+
Sbjct: 167 DANFIRSKLGRAIRVWSKHSKLVFTETRDPNADIVIKFLRGRHGDAYPFDGPGMVLAHAY 226

Query: 74  FPGSGRGGDAHFDIDEDW----MVLGVSRSANA--DEGKSLELANADE 115
           FPG+  GGD HFD DE+W       GV     A  + G SL LA+  E
Sbjct: 227 FPGTEIGGDVHFDADENWGSKMATTGVELFVAAAHEFGHSLGLAHVQE 274


>gi|170030219|ref|XP_001842987.1| matrix metalloproteinase [Culex quinquefasciatus]
 gi|167866423|gb|EDS29806.1| matrix metalloproteinase [Culex quinquefasciatus]
          Length = 541

 Score =  100 bits (250), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 45/80 (56%), Positives = 62/80 (77%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D G++R  L  ALD+W++++ ++FREV   +ADI + F ++ H DGY FDGPGKILAHAF
Sbjct: 31  DAGQVRRVLHEALDLWAQNANISFREVYSSQADIQVLFARQFHGDGYRFDGPGKILAHAF 90

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
           +PGSG GGDAHFD +E W++
Sbjct: 91  YPGSGIGGDAHFDEEETWLL 110


>gi|195475106|ref|XP_002089826.1| GE22137 [Drosophila yakuba]
 gi|194175927|gb|EDW89538.1| GE22137 [Drosophila yakuba]
          Length = 730

 Score =  100 bits (250), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 57/78 (73%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D  +++  +  AL VW  +SKLTFR+V  D+ADI I F +  H DGY FDGPG++LAHAF
Sbjct: 166 DAFKVQKMVDSALRVWEYNSKLTFRQVYSDQADIQILFARRQHGDGYKFDGPGQVLAHAF 225

Query: 74  FPGSGRGGDAHFDIDEDW 91
           +PG GRGGDAHFD DE W
Sbjct: 226 YPGEGRGGDAHFDADETW 243


>gi|158300836|ref|XP_320653.4| AGAP011870-PA [Anopheles gambiae str. PEST]
 gi|157013353|gb|EAA00126.4| AGAP011870-PA [Anopheles gambiae str. PEST]
          Length = 541

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/80 (56%), Positives = 59/80 (73%)

Query: 14 DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
          D G++R  L  AL +W++H+ + FREV    ADI + F ++ H DGY FDGPGKILAHAF
Sbjct: 20 DAGQVRRILHEALGLWAQHANINFREVYSTDADIQVMFARKFHGDGYNFDGPGKILAHAF 79

Query: 74 FPGSGRGGDAHFDIDEDWMV 93
          +PG+G GGDAHFD DE W++
Sbjct: 80 YPGTGIGGDAHFDADEKWLL 99


>gi|270012816|gb|EFA09264.1| matrix metalloproteinase 2 [Tribolium castaneum]
          Length = 701

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/102 (50%), Positives = 65/102 (63%), Gaps = 5/102 (4%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D  ++R  + +ALDVW++HSKLTF EV+  +ADILI+F +  H D +PFDG G ILAHAF
Sbjct: 205 DPYQVRLVISKALDVWARHSKLTFTEVDSPKADILIFFVRGEHGDNFPFDGKGVILAHAF 264

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           FP  G   D HFD DE W  +      N+DEG +L    A E
Sbjct: 265 FPNGGHSIDVHFDADEAWTTV-----PNSDEGTNLFNVAAHE 301


>gi|321465332|gb|EFX76334.1| hypothetical protein DAPPUDRAFT_226103 [Daphnia pulex]
          Length = 637

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/85 (54%), Positives = 61/85 (71%)

Query: 9   RVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKI 68
           + R  D G++R ++ RAL++W + S+LTF EVN + ADI + F    H DGYPFDG G +
Sbjct: 181 KSRDMDSGQIRYQVHRALNLWQEASRLTFTEVNHEDADIRVSFHSGFHNDGYPFDGKGTL 240

Query: 69  LAHAFFPGSGRGGDAHFDIDEDWMV 93
           LAHAFFPG+G GGDAHFD +E W+ 
Sbjct: 241 LAHAFFPGTGIGGDAHFDDEEPWVA 265


>gi|91089485|ref|XP_969495.1| PREDICTED: similar to matrix metalloproteinase [Tribolium
           castaneum]
          Length = 632

 Score = 99.0 bits (245), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/102 (50%), Positives = 65/102 (63%), Gaps = 5/102 (4%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D  ++R  + +ALDVW++HSKLTF EV+  +ADILI+F +  H D +PFDG G ILAHAF
Sbjct: 136 DPYQVRLVISKALDVWARHSKLTFTEVDSPKADILIFFVRGEHGDNFPFDGKGVILAHAF 195

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           FP  G   D HFD DE W  +      N+DEG +L    A E
Sbjct: 196 FPNGGHSIDVHFDADEAWTTV-----PNSDEGTNLFNVAAHE 232


>gi|241597746|ref|XP_002404696.1| matrix metalloproteinase, putative [Ixodes scapularis]
 gi|215500453|gb|EEC09947.1| matrix metalloproteinase, putative [Ixodes scapularis]
          Length = 136

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 63/102 (61%), Gaps = 8/102 (7%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDR--------ADILIYFEKENHWDGYPFDGP 65
           DR  +R ++ +AL VWS  SKL F E++           ADI + F + +H DGY FDGP
Sbjct: 33  DRSMIRSQIGKALRVWSDASKLRFTEISPQSVRSDAKGAADIAVTFARLDHGDGYSFDGP 92

Query: 66  GKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKS 107
           G ILAHAFFPG G GGDAHFD DE+W+      ++N +  +S
Sbjct: 93  GTILAHAFFPGDGMGGDAHFDADENWITGTPQSNSNGESTRS 134


>gi|29292580|dbj|BAC66372.1| matrix metalloproteinase e [Cynops pyrrhogaster]
          Length = 502

 Score = 94.0 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/69 (59%), Positives = 49/69 (71%)

Query: 25  ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
           AL VWS  S L F +++   ADI+I F   +H D YPFDGPGK LAHA++PGSG GGDAH
Sbjct: 142 ALGVWSSASPLKFSKIDSGIADIMISFASGDHQDPYPFDGPGKTLAHAYYPGSGIGGDAH 201

Query: 85  FDIDEDWMV 93
           FD DE W +
Sbjct: 202 FDEDETWSI 210


>gi|339243429|ref|XP_003377640.1| matrix metallo protein ase-17 [Trichinella spiralis]
 gi|316973541|gb|EFV57115.1| matrix metallo protein ase-17 [Trichinella spiralis]
          Length = 482

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/76 (57%), Positives = 52/76 (68%)

Query: 16  GRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFP 75
           GR R  +  AL VWS+ S L F E  DD AD+++ F   +H DGYPFDGP  +LAHAFFP
Sbjct: 109 GRTRRSIYDALSVWSEVSALKFTETQDDHADLVVEFHSGDHGDGYPFDGPNIVLAHAFFP 168

Query: 76  GSGRGGDAHFDIDEDW 91
           G+ RGGD HFD DE W
Sbjct: 169 GALRGGDVHFDNDERW 184


>gi|148227776|ref|NP_001080518.1| matrix metalloproteinase 1 precursor [Xenopus laevis]
 gi|32450369|gb|AAH54233.1| Mmp1-prov protein [Xenopus laevis]
          Length = 466

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/87 (54%), Positives = 55/87 (63%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+++Y     RDE+ RA+     VWS  + LTF  VND  ADI I F   +H D YPFDG
Sbjct: 116 RIQNYTPDMTRDEVDRAIQKAFKVWSDVTPLTFTRVNDGVADIEISFAARDHKDFYPFDG 175

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           P   LAHAF PG+  GGDAHFD DEDW
Sbjct: 176 PYGTLAHAFAPGNNNGGDAHFDEDEDW 202


>gi|89268105|emb|CAJ83580.1| matrix metalloproteinase 15 (membrane-inserted) [Xenopus (Silurana)
           tropicalis]
          Length = 584

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 55/89 (61%), Gaps = 7/89 (7%)

Query: 20  DELRRALDVWSKHSKLTFREVNDD-------RADILIYFEKENHWDGYPFDGPGKILAHA 72
           D +R+A DVWSK + LTFREV  +        ADILI F    H D  PFDGPG  LAHA
Sbjct: 88  DAIRKAFDVWSKATSLTFREVPYEAVRQRHSSADILILFASGFHGDSSPFDGPGGFLAHA 147

Query: 73  FFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           +FPG G GGDAHFD +E W V  +  + N
Sbjct: 148 YFPGPGMGGDAHFDSEEPWTVENMDLAGN 176


>gi|62860164|ref|NP_001015921.1| matrix metallopeptidase 15 [Xenopus (Silurana) tropicalis]
 gi|197246650|gb|AAI68432.1| matrix metallopeptidase 15 (membrane-inserted) [Xenopus (Silurana)
           tropicalis]
 gi|213626999|gb|AAI70564.1| matrix metallopeptidase 15 (membrane-inserted) [Xenopus (Silurana)
           tropicalis]
 gi|213627211|gb|AAI70917.1| matrix metallopeptidase 15 (membrane-inserted) [Xenopus (Silurana)
           tropicalis]
          Length = 648

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 55/89 (61%), Gaps = 7/89 (7%)

Query: 20  DELRRALDVWSKHSKLTFREVNDD-------RADILIYFEKENHWDGYPFDGPGKILAHA 72
           D +R+A DVWSK + LTFREV  +        ADILI F    H D  PFDGPG  LAHA
Sbjct: 152 DAIRKAFDVWSKATSLTFREVPYEAVRQRHSSADILILFASGFHGDSSPFDGPGGFLAHA 211

Query: 73  FFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           +FPG G GGDAHFD +E W V  +  + N
Sbjct: 212 YFPGPGMGGDAHFDSEEPWTVENMDLAGN 240


>gi|45382789|ref|NP_989998.1| matrix metalloproteinase-9 precursor [Gallus gallus]
 gi|12043935|gb|AAG47650.1|AF222690_1 75 kDa gelatinase [Gallus gallus]
          Length = 686

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/120 (46%), Positives = 67/120 (55%), Gaps = 11/120 (9%)

Query: 9   RVRHY----DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           RV +Y    DR  + D  RRA  VWS  + LTF ++    ADI+I F  + H DGYPFDG
Sbjct: 124 RVMNYSPDLDRAVIDDAFRRAFKVWSDVTPLTFTQIYSGEADIMIMFGSQEHGDGYPFDG 183

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMVLGV-----SRSANADEGKSLELANADEGRRH 119
              +LAHAF PGSG  GDAHFD DE W  LG      +R  NA+ G S       EGR +
Sbjct: 184 KDGLLAHAFPPGSGIQGDAHFDDDEFW-TLGTGLEVKTRYGNAN-GASCHFPFIFEGRSY 241


>gi|405975212|gb|EKC39793.1| Matrix metalloproteinase-17 [Crassostrea gigas]
          Length = 599

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 46/89 (51%), Positives = 54/89 (60%), Gaps = 4/89 (4%)

Query: 9   RVRHYDRGRLRDELRR----ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y       E+RR    A  VWS  + LTF EV    ADI+I F  + H DGYPFDG
Sbjct: 170 RIENYTPDLPWQEVRRVLADAFKVWSDVTDLTFTEVMHTSADIMIKFASKYHKDGYPFDG 229

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
            G ILAHAFFPG  +GGD HFD DE W +
Sbjct: 230 KGLILAHAFFPGKDKGGDTHFDEDEKWTI 258


>gi|29122671|dbj|BAC66058.1| matrix metalloproteinase [Crassostrea gigas]
          Length = 599

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 46/89 (51%), Positives = 54/89 (60%), Gaps = 4/89 (4%)

Query: 9   RVRHYDRGRLRDELRR----ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y       E+RR    A  VWS  + LTF EV    ADI+I F  + H DGYPFDG
Sbjct: 170 RIENYTPDLPWQEVRRVLADAFKVWSDVTDLTFTEVMHTSADIMIKFASKYHKDGYPFDG 229

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
            G ILAHAFFPG  +GGD HFD DE W +
Sbjct: 230 KGLILAHAFFPGKDKGGDTHFDEDEKWTI 258


>gi|427794557|gb|JAA62730.1| Putative matrix, partial [Rhipicephalus pulchellus]
          Length = 633

 Score = 91.3 bits (225), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 64/104 (61%), Gaps = 12/104 (11%)

Query: 11  RHYDRGRLRDELRRALDVWSKHSKLTFREV------------NDDRADILIYFEKENHWD 58
           R  DRG +R  + +AL VWS  SKL F E+            +D  ADI + F + +H D
Sbjct: 174 RQADRGMIRSAIGKALKVWSDASKLRFTEIAAVSSRRRRPDDDDGGADIAVSFARLDHGD 233

Query: 59  GYPFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSANA 102
           GY FDGPG +LAHAFFPG GRGGD HFD DE+W+    +R +NA
Sbjct: 234 GYAFDGPGVVLAHAFFPGEGRGGDVHFDADENWITGTPARDSNA 277


>gi|449477478|ref|XP_002196904.2| PREDICTED: stromelysin-3 [Taeniopygia guttata]
          Length = 723

 Score = 91.3 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 42/79 (53%), Positives = 52/79 (65%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           + ++R  +  AL VWS  + LTF EV + RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 211 KAKVRRTIEEALKVWSDVTPLTFTEVQEGRADIVIDFTRYWHGDNLPFDGPGGILAHAFF 270

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 271 PKTHREGDVHFDYDETWTI 289


>gi|344294928|ref|XP_003419167.1| PREDICTED: stromelysin-3 [Loxodonta africana]
          Length = 491

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 53/77 (68%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWSK + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 128 QVRQTVAEALQVWSKVTPLTFTEVHEGRADIMIDFTRYWHGDNLPFDGPGGILAHAFFPK 187

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W V
Sbjct: 188 THREGDVHFDYDETWTV 204


>gi|354492032|ref|XP_003508156.1| PREDICTED: stromelysin-3 [Cricetulus griseus]
          Length = 503

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 54/79 (68%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 138 REQVRQTMAEALQVWSEVTPLTFTEVHEGRADIMIDFTRYWHGDNLPFDGPGGILAHAFF 197

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 198 PKTHREGDVHFDYDETWTI 216


>gi|148699924|gb|EDL31871.1| matrix metallopeptidase 11, isoform CRA_b [Mus musculus]
          Length = 516

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 54/79 (68%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 127 REQVRQTVAEALQVWSEVTPLTFTEVHEGRADIMIDFARYWHGDNLPFDGPGGILAHAFF 186

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 187 PKTHREGDVHFDYDETWTI 205


>gi|6678894|ref|NP_032632.1| stromelysin-3 precursor [Mus musculus]
 gi|1352125|sp|Q02853.2|MMP11_MOUSE RecName: Full=Stromelysin-3; Short=SL-3; Short=ST3; AltName:
           Full=Matrix metalloproteinase-11; Short=MMP-11; Flags:
           Precursor
 gi|467683|emb|CAA78248.1| stromelysin-3 [Mus musculus]
 gi|74209127|dbj|BAE24956.1| unnamed protein product [Mus musculus]
 gi|148699922|gb|EDL31869.1| matrix metallopeptidase 11, isoform CRA_a [Mus musculus]
 gi|148699923|gb|EDL31870.1| matrix metallopeptidase 11, isoform CRA_a [Mus musculus]
          Length = 492

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 54/79 (68%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 127 REQVRQTVAEALQVWSEVTPLTFTEVHEGRADIMIDFARYWHGDNLPFDGPGGILAHAFF 186

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 187 PKTHREGDVHFDYDETWTI 205


>gi|31217385|gb|AAH52854.1| Matrix metallopeptidase 11 [Mus musculus]
          Length = 492

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 54/79 (68%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 127 REQVRQTVAEALQVWSEVTPLTFTEVHEGRADIMIDFARYWHGDNLPFDGPGGILAHAFF 186

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 187 PKTHREGDVHFDYDETWTI 205


>gi|13786841|pdb|1HV5|A Chain A, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
           Domain Complexed With A Phosphinic Inhibitor
 gi|13786842|pdb|1HV5|B Chain B, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
           Domain Complexed With A Phosphinic Inhibitor
 gi|13786843|pdb|1HV5|C Chain C, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
           Domain Complexed With A Phosphinic Inhibitor
 gi|13786844|pdb|1HV5|D Chain D, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
           Domain Complexed With A Phosphinic Inhibitor
 gi|13786845|pdb|1HV5|E Chain E, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
           Domain Complexed With A Phosphinic Inhibitor
 gi|13786846|pdb|1HV5|F Chain F, Crystal Structure Of The Stromelysin-3 (Mmp-11) Catalytic
           Domain Complexed With A Phosphinic Inhibitor
          Length = 165

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 54/79 (68%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 27  REQVRQTVAEALQVWSEVTPLTFTEVHEGRADIMIDFARYWHGDNLPFDGPGGILAHAFF 86

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 87  PKTHREGDVHFDYDETWTI 105


>gi|345323021|ref|XP_001509994.2| PREDICTED: neutrophil collagenase-like [Ornithorhynchus anatinus]
          Length = 437

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 50/72 (69%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           +  ++A  +WS  S LTF ++N+  ADI+IYF + +H D  PFDGP  ILAHAF PG G 
Sbjct: 102 EAFKKAFQLWSNASPLTFSKINEGDADIMIYFARRDHGDNSPFDGPNNILAHAFQPGRGI 161

Query: 80  GGDAHFDIDEDW 91
           GGDAHFD DE W
Sbjct: 162 GGDAHFDADETW 173


>gi|449486373|ref|XP_004177127.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-9
           [Taeniopygia guttata]
          Length = 652

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/89 (50%), Positives = 54/89 (60%), Gaps = 4/89 (4%)

Query: 9   RVRHY----DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           RV +Y    DR  + D  RRA  VWS  + LTF ++    ADI+I F  + H DGYPFDG
Sbjct: 127 RVMNYSPDLDRAVIDDAFRRAFQVWSDVTPLTFTQIYSGEADIMIMFGSQEHGDGYPFDG 186

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
              +LAHAF PG G  GDAHFD DE W +
Sbjct: 187 KDGLLAHAFPPGKGIQGDAHFDDDEFWTL 215


>gi|443690589|gb|ELT92681.1| hypothetical protein CAPTEDRAFT_164703 [Capitella teleta]
          Length = 518

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 7/97 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSG 78
           RD L RA  VW   ++L+F E     ADI++ F +  H D YPFDGPG +LAHAFFPG  
Sbjct: 68  RDALIRAFRVWMDVTQLSFHEEQQGSADIMVTFGRHYHGDPYPFDGPGMVLAHAFFPGEE 127

Query: 79  RGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           RGGD HFD DE W V       +++EG +L    A E
Sbjct: 128 RGGDVHFDEDEQWTV-------HSEEGVNLFAVAAHE 157


>gi|398650618|ref|NP_037112.2| stromelysin-3 precursor [Rattus norvegicus]
 gi|78099008|sp|Q499S5.1|MMP11_RAT RecName: Full=Stromelysin-3; Short=SL-3; Short=ST3; AltName:
           Full=Matrix metalloproteinase-11; Short=MMP-11; Flags:
           Precursor
 gi|149043717|gb|EDL97168.1| matrix metallopeptidase 11, isoform CRA_b [Rattus norvegicus]
 gi|149043718|gb|EDL97169.1| matrix metallopeptidase 11, isoform CRA_b [Rattus norvegicus]
          Length = 491

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 54/79 (68%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 127 REQVRQTVAEALRVWSEVTPLTFTEVHEGRADIMIDFTRYWHGDNLPFDGPGGILAHAFF 186

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 187 PKTHREGDVHFDYDETWTI 205


>gi|337298627|ref|NP_001229661.1| stromelysin-3 precursor [Canis lupus familiaris]
          Length = 489

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 54/79 (68%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 124 REQVRQTVAEALQVWSEVTPLTFTEVHEGRADIMIDFTRYWHGDNLPFDGPGGILAHAFF 183

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 184 PKTHREGDVHFDYDETWTI 202


>gi|395517586|ref|XP_003762956.1| PREDICTED: stromelysin-3, partial [Sarcophilus harrisii]
          Length = 346

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 51/77 (66%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV + RADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 48  QVRQMMAEALGVWSSVTPLTFTEVQEGRADIMIDFTRYRHGDNLPFDGPGGILAHAFFPK 107

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 108 THREGDVHFDYDETWTI 124


>gi|300250958|gb|ADJ95797.1| MMP11 protein precursor [Canis lupus familiaris]
          Length = 445

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 54/79 (68%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 80  REQVRQTVAEALQVWSEVTPLTFTEVHEGRADIMIDFTRYWHGDNLPFDGPGGILAHAFF 139

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 140 PKTHREGDVHFDYDETWTI 158


>gi|149043716|gb|EDL97167.1| matrix metallopeptidase 11, isoform CRA_a [Rattus norvegicus]
          Length = 472

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 54/79 (68%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 127 REQVRQTVAEALRVWSEVTPLTFTEVHEGRADIMIDFTRYWHGDNLPFDGPGGILAHAFF 186

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 187 PKTHREGDVHFDYDETWTI 205


>gi|444732298|gb|ELW72600.1| Stromelysin-3 [Tupaia chinensis]
          Length = 498

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 54/79 (68%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 165 REQVRQTVAEALRVWSEVTPLTFTEVHEGRADIMIDFTRYWHGDNLPFDGPGGILAHAFF 224

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 225 PKTHREGDVHFDYDETWTI 243


>gi|83776608|ref|NP_001032958.1| matrix metalloproteinase-2 precursor [Takifugu rubripes]
 gi|70568308|dbj|BAE06265.1| matrix metalloproteinase-2 [Takifugu rubripes]
          Length = 658

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/80 (51%), Positives = 50/80 (62%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + LTF  + D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 136 DEEVINDAFFRAFKVWSDVTPLTFERIMDGEADIMINFGRNEHGDGYPFDGKDGLLAHAF 195

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG+G GGD+HFD DE W +
Sbjct: 196 APGAGIGGDSHFDDDEQWTL 215


>gi|1762128|gb|AAC53061.1| stromelysin 3 [Rattus norvegicus]
 gi|133777189|gb|AAH99781.2| Matrix metallopeptidase 11 [Rattus norvegicus]
          Length = 458

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 54/79 (68%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 94  REQVRQTVAEALRVWSEVTPLTFTEVHEGRADIMIDFTRYWHGDNLPFDGPGGILAHAFF 153

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 154 PKTHREGDVHFDYDETWTI 172


>gi|345322983|ref|XP_003430663.1| PREDICTED: stromelysin-1-like isoform 4 [Ornithorhynchus anatinus]
          Length = 440

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 51/70 (72%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++A  VWS+ + LTF+++N+ +ADI+I F    H D YPFDGP   LAHA++PG G GG
Sbjct: 138 IQKAFQVWSEVTPLTFKKINEGQADIMISFASGAHGDFYPFDGPEGTLAHAYYPGIGIGG 197

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 198 DAHFDEDETW 207


>gi|57529313|ref|NP_001006278.1| matrilysin precursor [Gallus gallus]
 gi|53126797|emb|CAG30985.1| hypothetical protein RCJMB04_1g18 [Gallus gallus]
          Length = 263

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 58/96 (60%), Gaps = 8/96 (8%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D +RRAL VWS  + L F+ V   +ADI+I F +  H DGYPFDG G  LAHAF PG G 
Sbjct: 126 DAIRRALMVWSNVTPLRFKRVTSGQADIMIKFARRAHGDGYPFDGRGGTLAHAFQPGEGL 185

Query: 80  GGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           GGDAHFD DE W        +  ++G +L L  A E
Sbjct: 186 GGDAHFDDDERW--------SKYNQGVNLFLVAAHE 213


>gi|345322979|ref|XP_003430661.1| PREDICTED: stromelysin-1-like isoform 2 [Ornithorhynchus anatinus]
 gi|345322981|ref|XP_003430662.1| PREDICTED: stromelysin-1-like isoform 3 [Ornithorhynchus anatinus]
          Length = 488

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 51/70 (72%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++A  VWS+ + LTF+++N+ +ADI+I F    H D YPFDGP   LAHA++PG G GG
Sbjct: 138 IQKAFQVWSEVTPLTFKKINEGQADIMISFASGAHGDFYPFDGPEGTLAHAYYPGIGIGG 197

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 198 DAHFDEDETW 207


>gi|395520438|ref|XP_003764337.1| PREDICTED: interstitial collagenase [Sarcophilus harrisii]
          Length = 472

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/100 (47%), Positives = 61/100 (61%), Gaps = 4/100 (4%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D +R+A  VWS  S LTF +++   ADI I F   +H+D  PFDGP  ILAHAF PG G 
Sbjct: 133 DSIRKAFKVWSDVSPLTFTKISKGEADIKISFYYGDHYDNSPFDGPNGILAHAFQPGLGI 192

Query: 80  GGDAHFDIDEDWMV----LGVSRSANADEGKSLELANADE 115
           GGDAHFD DE+W        + R A  + G SL L+++ +
Sbjct: 193 GGDAHFDEDENWTTDYRNYNLYRVAAHEFGHSLGLSHSTD 232


>gi|426244419|ref|XP_004016020.1| PREDICTED: macrophage metalloelastase [Ovis aries]
          Length = 470

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/72 (54%), Positives = 49/72 (68%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D  ++A  VWS  + L FR+++++ ADI+I F    H D YPFDGP  ILAHAF PG+G 
Sbjct: 133 DAFQKAFQVWSDVTPLKFRQIHENEADIMIQFALREHRDAYPFDGPWGILAHAFAPGAGL 192

Query: 80  GGDAHFDIDEDW 91
           GGDAHFD  E W
Sbjct: 193 GGDAHFDEAETW 204


>gi|149633237|ref|XP_001508976.1| PREDICTED: stromelysin-1-like isoform 1 [Ornithorhynchus anatinus]
          Length = 476

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 51/70 (72%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++A  VWS+ + LTF+++N+ +ADI+I F    H D YPFDGP   LAHA++PG G GG
Sbjct: 138 IQKAFQVWSEVTPLTFKKINEGQADIMISFASGAHGDFYPFDGPEGTLAHAYYPGIGIGG 197

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 198 DAHFDEDETW 207


>gi|363740125|ref|XP_001232777.2| PREDICTED: stromelysin-3 [Gallus gallus]
          Length = 484

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 52/79 (65%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           + ++R  +  AL VWS  + LTF EV + RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 121 KSKVRRTIEEALKVWSDVTPLTFTEVQEGRADIVIDFTRYWHGDNLPFDGPGGILAHAFF 180

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 181 PKTHREGDVHFDYDETWTI 199


>gi|449281553|gb|EMC88600.1| Stromelysin-3 [Columba livia]
          Length = 421

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 52/79 (65%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           + ++R  +  AL VWS  + LTF EV + RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 54  KAKVRRTIEEALKVWSDVTPLTFTEVQEGRADIVIDFTRYWHGDNLPFDGPGGILAHAFF 113

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 114 PKTHREGDVHFDYDETWTI 132


>gi|148227598|ref|NP_001088503.1| matrix metallopeptidase 8 (neutrophil collagenase) precursor
           [Xenopus laevis]
 gi|54311407|gb|AAH84836.1| LOC495372 protein [Xenopus laevis]
          Length = 466

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/87 (52%), Positives = 54/87 (62%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     R+E+ RA+     VWS  + LTF  VND  ADI I F  + H D YPFDG
Sbjct: 116 RILNYTPDMTREEVDRAIQKAFKVWSDVTPLTFTRVNDGVADIEISFAAQVHNDFYPFDG 175

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           P   LAHAF PG+  GGDAHFD DEDW
Sbjct: 176 PYGTLAHAFAPGNNIGGDAHFDEDEDW 202


>gi|395862167|ref|XP_003803334.1| PREDICTED: stromelysin-3 [Otolemur garnettii]
          Length = 495

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 53/79 (67%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R +++  +  AL VWS+ + LTF EV + RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 129 REQVQQTVAEALRVWSEVTPLTFTEVQEGRADIMIDFTRYWHGDNLPFDGPGGILAHAFF 188

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W V
Sbjct: 189 PKTHREGDVHFDYDETWTV 207


>gi|119580008|gb|EAW59604.1| matrix metallopeptidase 11 (stromelysin 3), isoform CRA_b [Homo
           sapiens]
 gi|193786817|dbj|BAG52140.1| unnamed protein product [Homo sapiens]
          Length = 354

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 52/77 (67%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 109 QVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFFPK 168

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 169 THREGDVHFDYDETWTI 185


>gi|440901196|gb|ELR52182.1| Stromelysin-3, partial [Bos grunniens mutus]
          Length = 452

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 53/79 (67%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS  + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 87  REQVRQTVAEALQVWSDVTPLTFTEVHEGRADIVIDFTRYWHGDNLPFDGPGGILAHAFF 146

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 147 PKTHREGDVHFDYDETWTI 165


>gi|119909610|ref|XP_584877.3| PREDICTED: stromelysin-3 [Bos taurus]
 gi|297485001|ref|XP_002694738.1| PREDICTED: stromelysin-3 [Bos taurus]
 gi|296478350|tpg|DAA20465.1| TPA: matrix metallopeptidase 11-like [Bos taurus]
          Length = 466

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 53/79 (67%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS  + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 101 REQVRQTVAEALQVWSDVTPLTFTEVHEGRADIVIDFTRYWHGDNLPFDGPGGILAHAFF 160

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 161 PKTHREGDVHFDYDETWTI 179


>gi|326929890|ref|XP_003211086.1| PREDICTED: stromelysin-3-like [Meleagris gallopavo]
          Length = 453

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 52/79 (65%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           + ++R  +  AL VWS  + LTF EV + RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 90  KTKVRRTIEEALKVWSDVTPLTFTEVQEGRADIVIDFTRYWHGDNLPFDGPGGILAHAFF 149

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 150 PKTHREGDVHFDYDETWTI 168


>gi|297269064|ref|XP_001098000.2| PREDICTED: neutrophil collagenase [Macaca mulatta]
          Length = 467

 Score = 87.8 bits (216), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 4/98 (4%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++A +VWSK S LTF  ++  +ADI I F + +H D  PFDGP  ILAHAF PG G GG
Sbjct: 133 IKKAFEVWSKASPLTFTRISQGQADINIAFFQRDHGDNSPFDGPNGILAHAFQPGQGIGG 192

Query: 82  DAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           DAHFD +E W     + +    A  + G SL LA++ +
Sbjct: 193 DAHFDAEETWTKTSTNYNLFLVAAHEFGHSLGLAHSSD 230


>gi|334349524|ref|XP_001374247.2| PREDICTED: stromelysin-3-like [Monodelphis domestica]
          Length = 581

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 7/99 (7%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++++ +  AL VWSK + LTF EV   RADI+I F +  H D  PFDGPG +LAHAFFP 
Sbjct: 219 QVQEMMAEALRVWSKVTPLTFTEVRAGRADIMIDFTRYWHGDNLPFDGPGGVLAHAFFPK 278

Query: 77  SGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           + R GD HFD DE W       +A +D G  L    A E
Sbjct: 279 THRQGDVHFDYDETW-------TAGSDLGTDLLQVAAHE 310


>gi|355566056|gb|EHH22485.1| hypothetical protein EGK_05763 [Macaca mulatta]
          Length = 467

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 4/98 (4%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++A +VWSK S LTF  ++  +ADI I F + +H D  PFDGP  ILAHAF PG G GG
Sbjct: 133 IKKAFEVWSKASPLTFTRISQGQADINIAFFQRDHGDNSPFDGPNGILAHAFQPGQGIGG 192

Query: 82  DAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           DAHFD +E W     + +    A  + G SL LA++ +
Sbjct: 193 DAHFDAEETWTKTSTNYNLFLVAAHEFGHSLGLAHSSD 230


>gi|32997076|dbj|BAC79384.1| stromelysin-3 [Gallus gallus]
          Length = 134

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 52/79 (65%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           + ++R  +  AL VWS  + LTF EV + RADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 44  KSKVRRTIEEALKVWSDVTPLTFTEVQEGRADIVIDFTRYWHGDNLPFDGPGGILAHAFF 103

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 104 PKTHREGDVHFDYDETWTI 122


>gi|157278088|ref|NP_001098144.1| stromelysin-3 precursor [Oryzias latipes]
 gi|19071862|dbj|BAB85675.1| stromelysin-3 [Oryzias latipes]
          Length = 492

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 51/77 (66%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++RD  R A  VWS+ + L FREV D +ADI I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 143 KVRDIFREAFGVWSEVTPLRFREVTDGKADITIDFNRYWHGDNLPFDGPGGILAHAFFPR 202

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R G+ HFD DE W V
Sbjct: 203 THREGEVHFDFDEHWTV 219


>gi|351701835|gb|EHB04754.1| Stromelysin-3 [Heterocephalus glaber]
          Length = 453

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 54/77 (70%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS+ + LTF EV++ RADI+I F +  H D  PFDGPG +LAHAFFP 
Sbjct: 90  QVRKTMAEALRVWSEVTPLTFTEVHEGRADIMIDFTRYWHGDNLPFDGPGGVLAHAFFPK 149

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE+W +
Sbjct: 150 THREGDVHFDYDENWTI 166


>gi|348584468|ref|XP_003477994.1| PREDICTED: stromelysin-3 [Cavia porcellus]
          Length = 487

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 51/79 (64%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +R  +  AL VWS  + LTF EV++ RADI+I F    H D  PFDGPG ILAHAFF
Sbjct: 122 RKEVRKTVAEALQVWSDVTPLTFTEVHEGRADIMIDFASYWHGDNLPFDGPGGILAHAFF 181

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 182 PKTHREGDVHFDFDETWTI 200


>gi|354471681|ref|XP_003498069.1| PREDICTED: 72 kDa type IV collagenase [Cricetulus griseus]
          Length = 705

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 49/74 (66%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RAL VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 185 DAFARALQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 244

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 245 GGDSHFDDDELWTL 258


>gi|355752577|gb|EHH56697.1| hypothetical protein EGM_06160 [Macaca fascicularis]
          Length = 467

 Score = 87.4 bits (215), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 49/70 (70%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++A +VWSK S LTF  ++  +ADI I F + +H D  PFDGP  ILAHAF PG G GG
Sbjct: 133 IKKAFEVWSKASPLTFTRISQGQADINIAFFQRDHGDNSPFDGPNGILAHAFQPGQGIGG 192

Query: 82  DAHFDIDEDW 91
           DAHFD +E W
Sbjct: 193 DAHFDAEETW 202


>gi|348500042|ref|XP_003437582.1| PREDICTED: 72 kDa type IV collagenase [Oreochromis niloticus]
          Length = 589

 Score = 87.4 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 45/94 (47%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + LTF  + D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 69  DEEVINDAFFRAFKVWSDVTPLTFTRIMDGEADIMINFGRNEHGDGYPFDGKDGLLAHAF 128

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKS 107
            PG G GGD+HFD DE W  LG  +   A  G +
Sbjct: 129 APGPGIGGDSHFDDDEQW-TLGEGQVVKAKFGNA 161


>gi|410977265|ref|XP_003995028.1| PREDICTED: stromelysin-3 [Felis catus]
          Length = 488

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 53/79 (67%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++  ADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 123 REQVRQTVAEALQVWSEVTPLTFTEVHEGHADIMIDFTRYWHGDNLPFDGPGGILAHAFF 182

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 183 PKTHREGDVHFDYDETWTI 201


>gi|301779359|ref|XP_002925110.1| PREDICTED: stromelysin-3-like [Ailuropoda melanoleuca]
          Length = 467

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 53/79 (67%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++  ADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 96  REQVRQTVAEALQVWSEVTPLTFTEVHEGHADIMIDFTRYWHGDNLPFDGPGGILAHAFF 155

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 156 PKTHREGDVHFDYDETWTI 174


>gi|157278495|ref|NP_001098349.1| gelatinase A precursor [Oryzias latipes]
 gi|6539524|dbj|BAA85769.2| gelatinase A [Oryzias latipes]
          Length = 657

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/94 (46%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L+F  + D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 136 DEEVINDAFYRAFKVWSDVTPLSFTRIMDGEADIMINFGRNEHGDGYPFDGKDGLLAHAF 195

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKS 107
            PG G GGD+HFD DE W  LG  +   A  G +
Sbjct: 196 APGGGIGGDSHFDDDEQW-TLGEGQVVKAKFGNA 228


>gi|146262019|ref|NP_112316.2| 72 kDa type IV collagenase precursor [Rattus norvegicus]
 gi|146345459|sp|P33436.2|MMP2_RAT RecName: Full=72 kDa type IV collagenase; AltName: Full=72 kDa
           gelatinase; AltName: Full=Gelatinase A; AltName:
           Full=Matrix metalloproteinase-2; Short=MMP-2; Contains:
           RecName: Full=PEX; Flags: Precursor
 gi|1813503|gb|AAB41692.1| gelatinase A [Rattus norvegicus]
 gi|49256641|gb|AAH74013.1| Mmp2 protein [Rattus norvegicus]
 gi|149032698|gb|EDL87568.1| matrix metallopeptidase 2 [Rattus norvegicus]
          Length = 662

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 49/74 (66%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RAL VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARALKVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|32766503|gb|AAH54947.1| Mmp2 protein [Xenopus laevis]
          Length = 559

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/80 (51%), Positives = 50/80 (62%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 132 DSETVDDAFARAFKVWSDVTPLEFNRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAF 191

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PGSG GGD+HFD DE W +
Sbjct: 192 APGSGVGGDSHFDDDELWTL 211


>gi|854415|emb|CAA50583.1| type IV collagenase [Rattus norvegicus]
          Length = 662

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 49/74 (66%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RAL VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARALKVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|261249969|ref|NP_001159701.1| interstitial collagenase precursor [Sus scrofa]
 gi|116854|sp|P21692.2|MMP1_PIG RecName: Full=Interstitial collagenase; AltName: Full=Matrix
           metalloproteinase-1; Short=MMP-1; Contains: RecName:
           Full=18 kDa interstitial collagenase; Flags: Precursor
 gi|199652431|gb|ACH91675.1| matrix metallopeptidase 1 [Sus scrofa]
          Length = 469

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R+++ RA++    +WS  S LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMV----LGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKNFRDYNLYRVAAHELGHSLGLSHSTD 231


>gi|403295365|ref|XP_003938618.1| PREDICTED: stromelysin-3 [Saimiri boliviensis boliviensis]
          Length = 461

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 52/77 (67%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 98  QVRQTMAEALRVWSDVTPLTFTEVHEGRADIMIDFARYWHGDNLPFDGPGGILAHAFFPK 157

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 158 THREGDVHFDYDETWTI 174


>gi|344235912|gb|EGV92015.1| 72 kDa type IV collagenase [Cricetulus griseus]
          Length = 662

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 49/74 (66%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RAL VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARALQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|332208020|ref|XP_003253093.1| PREDICTED: matrilysin [Nomascus leucogenys]
          Length = 270

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 48/70 (68%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL++W K   L FR V    ADI+I F +  H D YPFDGPG ILAHAF PG+G GG
Sbjct: 132 VSKALNMWGKEIPLHFRRVVRGTADIMIGFARGAHGDSYPFDGPGNILAHAFAPGTGLGG 191

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 192 DAHFDEDERW 201


>gi|58331148|ref|NP_005931.2| stromelysin-3 preproprotein [Homo sapiens]
 gi|317373418|sp|P24347.3|MMP11_HUMAN RecName: Full=Stromelysin-3; Short=SL-3; Short=ST3; AltName:
           Full=Matrix metalloproteinase-11; Short=MMP-11; Flags:
           Precursor
          Length = 488

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 52/77 (67%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 125 QVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFFPK 184

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 185 THREGDVHFDYDETWTI 201


>gi|6678902|ref|NP_032636.1| 72 kDa type IV collagenase precursor [Mus musculus]
 gi|461766|sp|P33434.1|MMP2_MOUSE RecName: Full=72 kDa type IV collagenase; AltName: Full=72 kDa
           gelatinase; AltName: Full=Gelatinase A; AltName:
           Full=Matrix metalloproteinase-2; Short=MMP-2; Contains:
           RecName: Full=PEX; Flags: Precursor
 gi|198466|gb|AAA39338.1| type IV collagenase [Mus musculus]
 gi|47125523|gb|AAH70430.1| Matrix metallopeptidase 2 [Mus musculus]
 gi|74201524|dbj|BAE28402.1| unnamed protein product [Mus musculus]
 gi|148679142|gb|EDL11089.1| matrix metallopeptidase 2 [Mus musculus]
          Length = 662

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 49/74 (66%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RAL VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARALKVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|332265536|ref|XP_003281775.1| PREDICTED: stromelysin-3 isoform 1 [Nomascus leucogenys]
          Length = 493

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 52/77 (67%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 125 QVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFFPK 184

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 185 THREGDVHFDYDETWTI 201


>gi|426393805|ref|XP_004063200.1| PREDICTED: stromelysin-3 [Gorilla gorilla gorilla]
          Length = 488

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 52/77 (67%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 125 QVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFFPK 184

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 185 THREGDVHFDYDETWTI 201


>gi|395743409|ref|XP_003777917.1| PREDICTED: LOW QUALITY PROTEIN: neutrophil collagenase [Pongo
           abelii]
          Length = 465

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 8/115 (6%)

Query: 9   RVRHYDRGRLRDELR----RALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y      D+++    +A +VWSK S LTF  ++   ADI I F + +H D  PFDG
Sbjct: 116 RIRNYTPQLSEDDVKTAIEKAFEVWSKASPLTFTRISQGEADINIAFYQRDHGDNSPFDG 175

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           P  ILAHAF PG G GGD HFD +E W     + +    A  + G SL LA++ +
Sbjct: 176 PNGILAHAFQPGQGIGGDVHFDAEETWTKTSANYNLFIVAAHEFGHSLGLAHSSD 230


>gi|281343872|gb|EFB19456.1| hypothetical protein PANDA_014527 [Ailuropoda melanoleuca]
          Length = 446

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 53/79 (67%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++  ADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 84  REQVRQTVAEALQVWSEVTPLTFTEVHEGHADIMIDFTRYWHGDNLPFDGPGGILAHAFF 143

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 144 PKTHREGDVHFDYDETWTI 162


>gi|456257|emb|CAA40918.1| stromelysin-3 precursor [Homo sapiens]
 gi|58102165|gb|AAW65373.1| matrix metalloproteinase 11 (stromelysin 3) [Homo sapiens]
 gi|119580007|gb|EAW59603.1| matrix metallopeptidase 11 (stromelysin 3), isoform CRA_a [Homo
           sapiens]
          Length = 488

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 52/77 (67%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 125 QVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFFPK 184

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 185 THREGDVHFDYDETWTI 201


>gi|49117849|gb|AAH72762.1| Mmp2-prov protein, partial [Xenopus laevis]
          Length = 595

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/80 (51%), Positives = 50/80 (62%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 132 DSETVDDAFARAFKVWSDVTPLEFNRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAF 191

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PGSG GGD+HFD DE W +
Sbjct: 192 APGSGVGGDSHFDDDELWTL 211


>gi|148231336|ref|NP_001080697.1| 72 kDa type IV collagenase [Xenopus laevis]
 gi|18031736|gb|AAL01591.1| matrix metalloproteinase [Xenopus laevis]
          Length = 656

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/80 (51%), Positives = 50/80 (62%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 132 DSETVDDAFARAFKVWSDVTPLEFNRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAF 191

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PGSG GGD+HFD DE W +
Sbjct: 192 APGSGVGGDSHFDDDELWTL 211


>gi|37726915|gb|AAO63001.1| stromelysin 3 [Necturus maculosus]
          Length = 203

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 48/69 (69%)

Query: 25 ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
          AL VWS  + LTF EVN+ RADI+I F +  H D  PFDGPG ILAHAFFP + R GD H
Sbjct: 1  ALQVWSDVTSLTFTEVNEGRADIIIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVH 60

Query: 85 FDIDEDWMV 93
          FD DE W +
Sbjct: 61 FDYDETWTI 69


>gi|350594865|ref|XP_003360009.2| PREDICTED: hypothetical protein LOC100622161, partial [Sus scrofa]
          Length = 635

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 271 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 330

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 331 AYFPGPGIGGDTHFDSDEPWTL 352


>gi|32766501|gb|AAH54949.1| MGC64247 protein [Xenopus laevis]
          Length = 477

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 53/77 (68%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS+ + LTF EV++ R+DI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 113 KVRRTIAEALKVWSEVTPLTFTEVHEGRSDIIIDFTRYWHGDNLPFDGPGGILAHAFFPK 172

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 173 THREGDVHFDYDEAWTI 189


>gi|148232850|ref|NP_001079811.1| stromelysin-3 precursor [Xenopus laevis]
 gi|1705990|sp|Q11005.1|MMP11_XENLA RecName: Full=Stromelysin-3; Short=ST3; AltName: Full=Matrix
           metalloproteinase-11; Short=MMP-11; Flags: Precursor
 gi|414918|emb|CAA81616.1| stromelysin-3 [Xenopus laevis]
          Length = 477

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 53/77 (68%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS+ + LTF EV++ R+DI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 113 KVRRTIAEALKVWSEVTPLTFTEVHEGRSDIIIDFTRYWHGDNLPFDGPGGILAHAFFPK 172

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 173 THREGDVHFDYDEAWTI 189


>gi|431914337|gb|ELK15595.1| Stromelysin-3 [Pteropus alecto]
          Length = 445

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 53/79 (67%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++  ADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 80  REQVRKTVAEALQVWSEVTPLTFTEVHEGHADIMIDFTRYWHGDNLPFDGPGGILAHAFF 139

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 140 PKTHREGDVHFDYDETWTI 158


>gi|326936325|ref|XP_003214206.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-9-like
           [Meleagris gallopavo]
          Length = 689

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 4/89 (4%)

Query: 9   RVRHY----DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           RV +Y    DR  + D  +RA  VWS  + LTF ++    ADI+I F  + H DGYPFDG
Sbjct: 126 RVMNYSPDLDRAVIDDAFQRAFKVWSDVTPLTFTQIYSGEADIMIMFGSQEHGDGYPFDG 185

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
              +LAHAF PG G  GDAHFD DE W +
Sbjct: 186 KDGLLAHAFPPGRGIQGDAHFDDDEFWTL 214


>gi|114685393|ref|XP_515022.2| PREDICTED: stromelysin-3 [Pan troglodytes]
          Length = 469

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 52/77 (67%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 106 QVRQTMAEALKVWSDVTPLTFTEVHEGRADIVIDFARYWHGDDLPFDGPGGILAHAFFPK 165

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 166 THREGDVHFDYDETWTI 182


>gi|410339773|gb|JAA38833.1| matrix metallopeptidase 11 (stromelysin 3) [Pan troglodytes]
          Length = 489

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 52/77 (67%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 126 QVRQTMAEALKVWSDVTPLTFTEVHEGRADIVIDFARYWHGDDLPFDGPGGILAHAFFPK 185

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 186 THREGDVHFDYDETWTI 202


>gi|402895052|ref|XP_003910649.1| PREDICTED: neutrophil collagenase isoform 1 [Papio anubis]
          Length = 467

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 49/70 (70%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++A +VWSK S LTF  ++  +ADI I F + +H D  PFDGP  ILAHAF PG G GG
Sbjct: 133 IKKAFEVWSKASPLTFTRISQGQADINIGFFQRDHGDNSPFDGPNGILAHAFQPGQGIGG 192

Query: 82  DAHFDIDEDW 91
           DAHFD +E W
Sbjct: 193 DAHFDAEETW 202


>gi|260820672|ref|XP_002605658.1| hypothetical protein BRAFLDRAFT_264562 [Branchiostoma floridae]
 gi|229290993|gb|EEN61668.1| hypothetical protein BRAFLDRAFT_264562 [Branchiostoma floridae]
          Length = 499

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 4/102 (3%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           + D +RRA +VWS  + LTF E+    ADI+I F    H DG PFDGPG  LAHAFFPG 
Sbjct: 146 VHDAIRRAFNVWSDVTPLTFTEMFHGEADIMIDFLWGFHGDGNPFDGPGNTLAHAFFPGP 205

Query: 78  GRGGDAHFDIDEDWMVL----GVSRSANADEGKSLELANADE 115
            RGGD HFD +E W +      + + A  + G +L L ++ E
Sbjct: 206 RRGGDTHFDEEEKWTMTKEGANLFQVATHEFGHALGLGHSSE 247


>gi|930269|emb|CAA38526.1| propeptide for matix metalloproteinase (type I collagenase) [Sus
           scrofa]
          Length = 445

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R+++ RA++    +WS  S LTF +V++ +ADI+I F + +H D  
Sbjct: 89  HLTYRIENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVSEGQADIMISFVRGDHRDNS 148

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMV----LGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 149 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKNFRDYNLYRVAAHELGHSLGLSHSTD 207


>gi|327286066|ref|XP_003227752.1| PREDICTED: matrix metalloproteinase-25-like [Anolis carolinensis]
          Length = 514

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 9   RVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKI 68
           R  +  R  +R  +  A   WSK S LTFRE+  D+ADIL+ F +  H D YPFDGPG  
Sbjct: 133 RSSYLSRDHVRKLISEAFRAWSKSSALTFRELPSDQADILVDFTQSYHQDSYPFDGPGGT 192

Query: 69  LAHAFFPGS-GRGGDAHFDIDEDWM 92
           LAHAFFPG     GD HFD +E W+
Sbjct: 193 LAHAFFPGEHPVSGDTHFDDEETWI 217


>gi|194043362|ref|XP_001929480.1| PREDICTED: stromelysin-3 [Sus scrofa]
          Length = 491

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 52/79 (65%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS  + LTF EV++  ADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 126 REQVRQTVAEALQVWSDVTPLTFTEVHEGHADIMIDFTRYWHGDNLPFDGPGGILAHAFF 185

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W V
Sbjct: 186 PKTHREGDVHFDYDETWTV 204


>gi|260820674|ref|XP_002605659.1| hypothetical protein BRAFLDRAFT_279941 [Branchiostoma floridae]
 gi|229290994|gb|EEN61669.1| hypothetical protein BRAFLDRAFT_279941 [Branchiostoma floridae]
          Length = 606

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 4/102 (3%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           + D +RRA +VWS  + LTF E+    ADI+I F    H DG PFDGPG  LAHAFFPG 
Sbjct: 146 VHDAIRRAFNVWSDVTPLTFTEMFHGEADIMIDFLWGFHGDGNPFDGPGNTLAHAFFPGP 205

Query: 78  GRGGDAHFDIDEDWMVL----GVSRSANADEGKSLELANADE 115
            RGGD HFD +E W +      + + A  + G +L L ++ E
Sbjct: 206 RRGGDTHFDEEEKWTMTKEGANLFQVATHEFGHALGLGHSSE 247


>gi|397465836|ref|XP_003804686.1| PREDICTED: stromelysin-3 [Pan paniscus]
          Length = 474

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 52/77 (67%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 111 QVRQTMAEALKVWSDVTPLTFTEVHEGRADIVIDFARYWHGDDLPFDGPGGILAHAFFPK 170

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 171 THREGDVHFDYDETWTI 187


>gi|402895054|ref|XP_003910650.1| PREDICTED: neutrophil collagenase isoform 2 [Papio anubis]
          Length = 444

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 49/70 (70%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++A +VWSK S LTF  ++  +ADI I F + +H D  PFDGP  ILAHAF PG G GG
Sbjct: 110 IKKAFEVWSKASPLTFTRISQGQADINIGFFQRDHGDNSPFDGPNGILAHAFQPGQGIGG 169

Query: 82  DAHFDIDEDW 91
           DAHFD +E W
Sbjct: 170 DAHFDAEETW 179


>gi|213515562|ref|NP_001133404.1| 72 kDa type IV collagenase precursor [Salmo salar]
 gi|209153633|gb|ACI33172.1| 72 kDa type IV collagenase precursor [Salmo salar]
          Length = 659

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/91 (47%), Positives = 51/91 (56%), Gaps = 4/91 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           L H P      D   + D   RA  VWS  + L F  + D  ADI+I F +  H DGYPF
Sbjct: 130 LGHSPD----LDEETIDDAFLRAFKVWSDVTPLKFTRLMDGEADIMINFGRNEHGDGYPF 185

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           DG   +LAHAF PG G GGD+HFD DE W +
Sbjct: 186 DGKDGLLAHAFAPGPGTGGDSHFDDDEQWTL 216


>gi|185134355|ref|NP_001117661.1| matrix metalloproteinase-2 precursor [Oncorhynchus mykiss]
 gi|4996455|dbj|BAA78479.1| matrix metalloproteinase-2 [Oncorhynchus mykiss]
          Length = 655

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/91 (47%), Positives = 51/91 (56%), Gaps = 4/91 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           L H P      D   + D   RA  VWS  + L F  + D  ADI+I F +  H DGYPF
Sbjct: 126 LGHSPD----LDEETIDDAFLRAFKVWSDVTPLKFTRLMDGEADIMINFGRNEHGDGYPF 181

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           DG   +LAHAF PG G GGD+HFD DE W +
Sbjct: 182 DGKDGLLAHAFAPGPGTGGDSHFDDDEQWTL 212


>gi|62752843|ref|NP_001015789.1| 72 kDa type IV collagenase precursor [Xenopus (Silurana)
           tropicalis]
 gi|58476704|gb|AAH89734.1| matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa
           type 4 collagenase) [Xenopus (Silurana) tropicalis]
          Length = 655

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/80 (51%), Positives = 50/80 (62%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 131 DSETVDDAFARAFKVWSDVTPLEFTRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAF 190

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PGSG GGD+HFD DE W +
Sbjct: 191 APGSGVGGDSHFDDDELWTL 210


>gi|301604612|ref|XP_002931938.1| PREDICTED: stromelysin-3-like [Xenopus (Silurana) tropicalis]
          Length = 478

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 53/77 (68%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS+ + LTF EV++ R+DI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 114 KVRRTIAEALMVWSEVTPLTFTEVHEGRSDIIIDFTRYWHGDNLPFDGPGGILAHAFFPK 173

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 174 THREGDVHFDYDEAWTI 190


>gi|71896459|ref|NP_001025501.1| matrix metallopeptidase 1 precursor [Xenopus (Silurana) tropicalis]
 gi|89268617|emb|CAJ82765.1| matrix metalloproteinase 1 (interstitial collagenase) [Xenopus
           (Silurana) tropicalis]
          Length = 467

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 48/70 (68%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           ++RA  VWS  + LTF  + ++ +DI I F   +H D  PFDGPG ILAHAF PG+G GG
Sbjct: 134 IQRAFKVWSDVTPLTFTRIYNEVSDIEISFSAGDHKDNSPFDGPGGILAHAFQPGNGIGG 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDEDESW 203


>gi|327276425|ref|XP_003222970.1| PREDICTED: 72 kDa type IV collagenase-like [Anolis carolinensis]
          Length = 675

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/80 (50%), Positives = 50/80 (62%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L+F  ++D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 153 DSETVDDAFARAFKVWSDVTPLSFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAF 212

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG G GGD+HFD DE W +
Sbjct: 213 APGPGVGGDSHFDDDELWTL 232


>gi|449282434|gb|EMC89267.1| 72 kDa type IV collagenase [Columba livia]
          Length = 661

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  +ND  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 139 DAFARAFQVWSDVTPLRFNRINDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGI 198

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 199 GGDSHFDDDELWTL 212


>gi|126722977|ref|NP_001075678.1| 72 kDa type IV collagenase precursor [Oryctolagus cuniculus]
 gi|1705979|sp|P50757.1|MMP2_RABIT RecName: Full=72 kDa type IV collagenase; AltName: Full=72 kDa
           gelatinase; AltName: Full=Gelatinase A; AltName:
           Full=Matrix metalloproteinase-2; Short=MMP-2; Contains:
           RecName: Full=PEX; Flags: Precursor
 gi|944817|dbj|BAA09796.1| matrix metalloproteinase-2 [Oryctolagus cuniculus]
          Length = 662

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARAFQVWSNVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|171846809|gb|AAI61475.1| mmp1 protein [Xenopus (Silurana) tropicalis]
          Length = 381

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 48/70 (68%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           ++RA  VWS  + LTF  + ++ +DI I F   +H D  PFDGPG ILAHAF PG+G GG
Sbjct: 48  IQRAFKVWSDVTPLTFTRIYNEVSDIEISFSAGDHKDNSPFDGPGGILAHAFQPGNGIGG 107

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 108 DAHFDEDESW 117


>gi|126327140|ref|XP_001366784.1| PREDICTED: interstitial collagenase [Monodelphis domestica]
          Length = 469

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/77 (53%), Positives = 49/77 (63%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D  R+A  VWS  S LTF +++   ADI I F   +H+D  PFDGP  ILAHAF 
Sbjct: 125 REDVDDAFRKAFKVWSDVSPLTFTKISKGEADIKISFNYRDHYDNSPFDGPNGILAHAFQ 184

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G GGDAHFD +E W
Sbjct: 185 PGPGIGGDAHFDEEERW 201


>gi|291415637|ref|XP_002724058.1| PREDICTED: matrix metalloproteinase 11 [Oryctolagus cuniculus]
          Length = 492

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 4/89 (4%)

Query: 9   RVRHYDRGRLRDELRR----ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+  +    +R+++RR    AL VWS+ + LTF EV++  ADI+I F +  H D  PFDG
Sbjct: 117 RILRFPWQLVREQVRRTVAEALQVWSEVTPLTFTEVHEGHADIVIDFTRYWHGDNLPFDG 176

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           PG ILAHAFFP + R GD HFD DE W +
Sbjct: 177 PGGILAHAFFPKTHREGDVHFDYDETWTI 205


>gi|344256057|gb|EGW12161.1| Stromelysin-3 [Cricetulus griseus]
          Length = 361

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/72 (56%), Positives = 50/72 (69%)

Query: 22 LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
          +  AL VWS+ + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFFP + R G
Sbjct: 1  MAEALQVWSEVTPLTFTEVHEGRADIMIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREG 60

Query: 82 DAHFDIDEDWMV 93
          D HFD DE W +
Sbjct: 61 DVHFDYDETWTI 72


>gi|332227848|ref|XP_003263105.1| PREDICTED: LOW QUALITY PROTEIN: 72 kDa type IV collagenase
           [Nomascus leucogenys]
          Length = 660

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|326914436|ref|XP_003203531.1| PREDICTED: 72 kDa type IV collagenase-like [Meleagris gallopavo]
          Length = 267

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 58/101 (57%), Gaps = 8/101 (7%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D +RRAL VWS  + L F+ V    ADI+I F +  H DGYPFDG    LAHAF 
Sbjct: 125 REYVNDAIRRALMVWSDVTPLRFKRVTQGHADIVIKFARRAHGDGYPFDGRSGTLAHAFQ 184

Query: 75  PGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           PG G GGDAHFD DE W        +  ++G +L L  A E
Sbjct: 185 PGEGLGGDAHFDDDERW--------SKYNQGVNLFLVAAHE 217


>gi|345325984|ref|XP_001508394.2| PREDICTED: 72 kDa type IV collagenase [Ornithorhynchus anatinus]
          Length = 700

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PGSG 
Sbjct: 184 DAFARAFQVWSDVTPLKFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGSGV 243

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 244 GGDSHFDDDELWTL 257


>gi|189053422|dbj|BAG35588.1| unnamed protein product [Homo sapiens]
          Length = 660

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|61368087|gb|AAX43100.1| matrix metalloproteinase 2 [synthetic construct]
          Length = 661

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|426382208|ref|XP_004057705.1| PREDICTED: 72 kDa type IV collagenase isoform 1 [Gorilla gorilla
           gorilla]
 gi|383413337|gb|AFH29882.1| 72 kDa type IV collagenase isoform a preproprotein [Macaca mulatta]
 gi|384947146|gb|AFI37178.1| 72 kDa type IV collagenase isoform a preproprotein [Macaca mulatta]
 gi|387540702|gb|AFJ70978.1| 72 kDa type IV collagenase isoform a preproprotein [Macaca mulatta]
          Length = 660

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|109128539|ref|XP_001087939.1| PREDICTED: 72 kDa type IV collagenase isoform 4 [Macaca mulatta]
          Length = 660

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|11342666|ref|NP_004521.1| 72 kDa type IV collagenase isoform a preproprotein [Homo sapiens]
 gi|116856|sp|P08253.2|MMP2_HUMAN RecName: Full=72 kDa type IV collagenase; AltName: Full=72 kDa
           gelatinase; AltName: Full=Gelatinase A; AltName:
           Full=Matrix metalloproteinase-2; Short=MMP-2; AltName:
           Full=TBE-1; Contains: RecName: Full=PEX; Flags:
           Precursor
 gi|180616|gb|AAA52028.1| type IV collagenase [Homo sapiens]
 gi|12803499|gb|AAH02576.1| Matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa
           type IV collagenase) [Homo sapiens]
 gi|51831776|gb|AAU10089.1| matrix metalloproteinase 2 (gelatinase A, 72kDa gelatinase, 72kDa
           type IV collagenase) [Homo sapiens]
 gi|60655143|gb|AAX32135.1| matrix metalloproteinase 2 [synthetic construct]
 gi|119603230|gb|EAW82824.1| matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa
           type IV collagenase), isoform CRA_a [Homo sapiens]
 gi|119603233|gb|EAW82827.1| matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa
           type IV collagenase), isoform CRA_a [Homo sapiens]
 gi|119603234|gb|EAW82828.1| matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa
           type IV collagenase), isoform CRA_a [Homo sapiens]
 gi|123982098|gb|ABM82878.1| matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa
           type IV collagenase) [synthetic construct]
 gi|123996925|gb|ABM86064.1| matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa
           type IV collagenase) [synthetic construct]
 gi|168278072|dbj|BAG11014.1| 72 kDa type IV collagenase precursor [synthetic construct]
          Length = 660

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|337298612|ref|NP_001229655.1| matrilysin precursor [Canis lupus familiaris]
          Length = 263

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 50/77 (64%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R R+   + +AL +WSK   L+FR V    ADI+I F +  H D YPFDGPG ILAHAF 
Sbjct: 122 RFRVNQLVAKALAMWSKEIPLSFRRVPRGTADIMIGFARGAHGDYYPFDGPGNILAHAFA 181

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG   GGDAHFD DE W
Sbjct: 182 PGPDLGGDAHFDEDERW 198


>gi|444724331|gb|ELW64938.1| Interstitial collagenase [Tupaia chinensis]
          Length = 433

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   +R+A ++WS  S LTF +V D +ADI+I F + +H D  
Sbjct: 112 HLTYRIENYTPDLPRADVDSAIRKAFELWSDVSPLTFTKVFDGQADIMISFVRGDHRDNS 171

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG  LAHAF PG G GGDAHFD DE W
Sbjct: 172 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERW 202


>gi|402895058|ref|XP_003910652.1| PREDICTED: interstitial collagenase-like isoform 2 [Papio anubis]
          Length = 403

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 47  HLTYRIENYTPDLPRAAVDQAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 106

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL LA++ +
Sbjct: 107 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHELGHSLGLAHSTD 165


>gi|224064295|ref|XP_002192705.1| PREDICTED: 72 kDa type IV collagenase [Taeniopygia guttata]
          Length = 661

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  +ND  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 139 DAFARAFQVWSDVTPLRFNRINDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGI 198

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 199 GGDSHFDDDELWTL 212


>gi|402895056|ref|XP_003910651.1| PREDICTED: interstitial collagenase-like isoform 1 [Papio anubis]
          Length = 469

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRAAVDQAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL LA++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHELGHSLGLAHSTD 231


>gi|180671|gb|AAA35701.1| collagenase type IV precursor, partial [Homo sapiens]
          Length = 644

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 126 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 185

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 186 GGDSHFDDDELWTL 199


>gi|194214001|ref|XP_001490302.2| PREDICTED: stromelysin-3 [Equus caballus]
          Length = 472

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 52/79 (65%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++  ADI I F +  H D  PFDGPG ILAHAFF
Sbjct: 107 REQVRQTVAEALQVWSEVTPLTFTEVHEGHADITIDFTRYWHGDNLPFDGPGGILAHAFF 166

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 167 PKTHREGDVHFDYDETWTI 185


>gi|37694086|gb|AAQ98971.1| gelatinase A [Meleagris gallopavo]
          Length = 654

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  +ND  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 139 DAFARAFKVWSDVTPLRFNRINDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGI 198

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 199 GGDSHFDDDELWTL 212


>gi|327291129|ref|XP_003230274.1| PREDICTED: matrix metalloproteinase-15-like, partial [Anolis
           carolinensis]
          Length = 404

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 5/103 (4%)

Query: 1   MTLKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVN--DDRADILIYFEKENHWD 58
            ++++H +++    R   ++ +RRA  VW + + L+FREV+     AD+++ F    H D
Sbjct: 136 FSIQNHTEKL---GRSASQEAIRRAFRVWEEATPLSFREVSFSGTEADLVVLFASGFHGD 192

Query: 59  GYPFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
             PFDG G  LAHAFFPG G GGDAHFD+DE W +  V  + N
Sbjct: 193 SSPFDGAGGFLAHAFFPGPGMGGDAHFDLDEPWTLENVDGAGN 235


>gi|27806541|ref|NP_776537.1| interstitial collagenase precursor [Bos taurus]
 gi|116851|sp|P28053.1|MMP1_BOVIN RecName: Full=Interstitial collagenase; AltName: Full=Fibroblast
           collagenase; AltName: Full=Matrix metalloproteinase-1;
           Short=MMP-1; Flags: Precursor
 gi|260|emb|CAA41210.1| preprocollagenase [Bos taurus]
          Length = 469

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/115 (41%), Positives = 68/115 (59%), Gaps = 8/115 (6%)

Query: 9   RVRHY----DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  PFDG
Sbjct: 117 RIENYTPDLSRADVDQAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDG 176

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV----LGVSRSANADEGKSLELANADE 115
           PG  LAHAF PG+G GGDAHFD DE W        + R A  + G SL LA++ +
Sbjct: 177 PGGNLAHAFQPGAGIGGDAHFDDDEWWTSNFQDYNLYRVAAHEFGHSLGLAHSTD 231


>gi|326927247|ref|XP_003209804.1| PREDICTED: 72 kDa type IV collagenase [Meleagris gallopavo]
          Length = 663

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  +ND  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 139 DAFARAFKVWSDVTPLRFNRINDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGI 198

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 199 GGDSHFDDDELWTL 212


>gi|48479264|gb|AAT44903.1| matrix metalloproteinase 2 [Tupaia belangeri]
          Length = 660

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|45383321|ref|NP_989751.1| 72 kDa type IV collagenase preproprotein [Gallus gallus]
 gi|2499908|sp|Q90611.1|MMP2_CHICK RecName: Full=72 kDa type IV collagenase; AltName: Full=72 kDa
           gelatinase; AltName: Full=Gelatinase A; AltName:
           Full=Matrix metalloproteinase-2; Short=MMP-2; Flags:
           Precursor
 gi|504476|gb|AAA19596.1| prepro-72kDa matrix metalloproteinase [Gallus gallus]
          Length = 663

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  +ND  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 139 DAFARAFKVWSDVTPLRFNRINDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGI 198

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 199 GGDSHFDDDELWTL 212


>gi|15718387|dbj|BAB68365.1| gelatinase [Paralichthys olivaceus]
          Length = 658

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/80 (50%), Positives = 49/80 (61%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L+F  + D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 137 DEEVINDAFFRAFKVWSDVTPLSFTRLMDGEADIMINFGRNEHGDGYPFDGKDGLLAHAF 196

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG G GGD+HFD DE W +
Sbjct: 197 APGPGIGGDSHFDDDEQWTL 216


>gi|355752580|gb|EHH56700.1| hypothetical protein EGM_06163 [Macaca fascicularis]
          Length = 469

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRAAVDQAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL LA++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHEFGHSLGLAHSTD 231


>gi|297269067|ref|XP_002799829.1| PREDICTED: interstitial collagenase [Macaca mulatta]
          Length = 403

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 47  HLTYRIENYTPDLPRAAVDQAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 106

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL LA++ +
Sbjct: 107 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHEFGHSLGLAHSTD 165


>gi|114640081|ref|XP_508721.2| PREDICTED: matrilysin isoform 2 [Pan troglodytes]
          Length = 267

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 48/70 (68%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL++W K   L FR+V    ADI+I F +  H D YPFDGPG  LAHAF PG+G GG
Sbjct: 129 VSKALNMWGKEIPLHFRKVVRGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGG 188

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 189 DAHFDEDERW 198


>gi|355566053|gb|EHH22482.1| hypothetical protein EGK_05760 [Macaca mulatta]
          Length = 469

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRAAVDQAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL LA++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHEFGHSLGLAHSTD 231


>gi|355710202|gb|EHH31666.1| 72 kDa type IV collagenase [Macaca mulatta]
          Length = 629

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 111 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 170

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 171 GGDSHFDDDELWTL 184


>gi|355702771|gb|AES02043.1| matrix metallopeptidase 11 [Mustela putorius furo]
          Length = 490

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 52/79 (65%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS+ + LTF EV++  ADI I F +  H D  PFDGPG ILAHAFF
Sbjct: 129 REQVRQTVAEALQVWSEVTPLTFTEVHEGHADITIDFTRYWHGDNLPFDGPGGILAHAFF 188

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 189 PKTHREGDVHFDYDETWTI 207


>gi|109108464|ref|XP_001098302.1| PREDICTED: interstitial collagenase isoform 2 [Macaca mulatta]
          Length = 469

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRAAVDQAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL LA++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHEFGHSLGLAHSTD 231


>gi|213512999|ref|NP_001133929.1| Matrix metalloproteinase-9 precursor [Salmo salar]
 gi|209155852|gb|ACI34158.1| Matrix metalloproteinase-9 precursor [Salmo salar]
          Length = 671

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 3/105 (2%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + LTF  + D  ADI++ F K +H DGYPFDG   +LAHAF PG G 
Sbjct: 140 DAFARAFKVWSDVTPLTFTRLFDGTADIMVSFGKADHGDGYPFDGKDGLLAHAFPPGEGI 199

Query: 80  GGDAHFDIDEDWMV---LGVSRSANADEGKSLELANADEGRRHVT 121
            GDAHFD DE+W +     V  S    EG   +     EG+++ T
Sbjct: 200 QGDAHFDDDENWTLGKGPAVKTSFGNAEGALCQFPFLFEGKQYST 244


>gi|119603232|gb|EAW82826.1| matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa
           type IV collagenase), isoform CRA_c [Homo sapiens]
          Length = 430

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|157831037|pdb|1FBL|A Chain A, Structure Of Full-Length Porcine Synovial Collagenase
           (Mmp1) Reveals A C-Terminal Domain Containing A
           Calcium-Linked, Four-Bladed Beta- Propeller
          Length = 370

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R+++ RA++    +WS  S LTF +V++ +ADI+I F + +H D  
Sbjct: 14  HLTYRIENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVSEGQADIMISFVRGDHRDNS 73

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMV----LGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 74  PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKNFRDYNLYRVAAHELGHSLGLSHSTD 132


>gi|5822007|pdb|1CK7|A Chain A, Gelatinase A (Full-Length)
 gi|22218675|pdb|1GXD|A Chain A, Prommp-2TIMP-2 Complex
 gi|22218676|pdb|1GXD|B Chain B, Prommp-2TIMP-2 Complex
          Length = 631

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 113 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 172

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 173 GGDSHFDDDELWTL 186


>gi|327242231|gb|AEA40854.1| matrix metalloproteinase-7 [Canis lupus familiaris]
          Length = 230

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 50/77 (64%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R R+   + +AL +WSK   L+FR V    ADI+I F +  H D YPFDGPG ILAHAF 
Sbjct: 89  RFRVNQLVAKALAMWSKEIPLSFRRVPRGTADIMIGFARGAHGDYYPFDGPGNILAHAFA 148

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG   GGDAHFD DE W
Sbjct: 149 PGPDLGGDAHFDEDERW 165


>gi|402908411|ref|XP_003916935.1| PREDICTED: 72 kDa type IV collagenase, partial [Papio anubis]
          Length = 707

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 186 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 245

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 246 GGDSHFDDDELWTL 259


>gi|348583657|ref|XP_003477589.1| PREDICTED: 72 kDa type IV collagenase-like [Cavia porcellus]
          Length = 662

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS+ + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 142 DAFARAFQVWSQVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|344287825|ref|XP_003415652.1| PREDICTED: stromelysin-1-like [Loxodonta africana]
          Length = 477

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     RD     + +AL VW + + LTF   N+  ADI+I F    H D  
Sbjct: 113 HLTYRIVNYTLDLPRDAVDAAIEKALKVWEEVTPLTFSRNNEGEADIMISFAVREHGDFI 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPGK+LAHA+ PG G  GDAHFD DE W
Sbjct: 173 PFDGPGKVLAHAYAPGPGLNGDAHFDDDEQW 203


>gi|327269116|ref|XP_003219341.1| PREDICTED: interstitial collagenase-like [Anolis carolinensis]
          Length = 465

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 1/80 (1%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A +VWSK S LTF+ + D  ADI++ FE  +H D  PFDGP   LAHAF PG   GG
Sbjct: 132 IEKAFEVWSKASPLTFKRLYDGIADIMMSFEIRDHGDNSPFDGPNNYLAHAFSPGDNIGG 191

Query: 82  DAHFDIDEDWMVLGVSRSAN 101
           D HFD DE W   G SR  N
Sbjct: 192 DVHFDEDELWTTKG-SRGYN 210


>gi|417412170|gb|JAA52496.1| Putative 72 kda type iv collagenase, partial [Desmodus rotundus]
          Length = 661

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/80 (50%), Positives = 49/80 (61%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 135 DSETVDDAFFRAFQVWSNVTPLQFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAF 194

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG G GGD+HFD DE W +
Sbjct: 195 APGPGVGGDSHFDDDELWTL 214


>gi|148222573|ref|NP_001079874.1| uncharacterized protein LOC379564 precursor [Xenopus laevis]
 gi|33585866|gb|AAH56080.1| MGC69070 protein [Xenopus laevis]
          Length = 258

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 50/77 (64%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + + +R A  VWS  + L F  V+  RADILI F   +H DG PFDGP  +LAHA+ 
Sbjct: 120 RPVVDEAIRMAFKVWSDVTPLKFTRVSSRRADILIQFGARSHGDGIPFDGPNGVLAHAYA 179

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG+G GGDAHFD DE W
Sbjct: 180 PGNGIGGDAHFDEDERW 196


>gi|395839432|ref|XP_003792593.1| PREDICTED: 72 kDa type IV collagenase [Otolemur garnettii]
          Length = 662

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARAFQVWSGVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|227423|prf||1703414A metalloprotease
          Length = 488

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 4/79 (5%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDG--YPFDGPGKILAHAFF 74
           ++R  +  AL VWS  + LTF EV++ RADI+I F +  +WDG   PFDGPG ILAHAFF
Sbjct: 125 QVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFAR--YWDGDDLPFDGPGGILAHAFF 182

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 183 PKTHREGDVHFDYDETWTI 201


>gi|319072680|ref|NP_001187264.1| matrix metalloproteinase 13 precursor [Ictalurus punctatus]
 gi|291195939|gb|ADD84683.1| matrix metalloproteinase 13 [Ictalurus punctatus]
          Length = 471

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 48/70 (68%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D ++RAL VW++ + L F+ +    ADI+I F   +H DG PFDGP   LAHAFFPG G 
Sbjct: 133 DSIQRALQVWARVTPLKFKRIYSGIADIMISFVVGDHRDGSPFDGPNGFLAHAFFPGVGI 192

Query: 80  GGDAHFDIDE 89
           GGDAHFD DE
Sbjct: 193 GGDAHFDDDE 202


>gi|359072641|ref|XP_003586977.1| PREDICTED: interstitial collagenase-like [Bos taurus]
 gi|296480355|tpg|DAA22470.1| TPA: interstitial collagenase precursor [Bos taurus]
          Length = 469

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 48/115 (41%), Positives = 68/115 (59%), Gaps = 8/115 (6%)

Query: 9   RVRHY----DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  PFDG
Sbjct: 117 RIENYTPDLSRADVDQAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDG 176

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV----LGVSRSANADEGKSLELANADE 115
           PG  LAHAF PG+G GGDAHFD DE W        + R A  + G SL LA++ +
Sbjct: 177 PGGNLAHAFQPGAGIGGDAHFDDDEWWTSNFQDYNLYRVAAHEFGHSLGLAHSTD 231


>gi|189217853|ref|NP_001121363.1| 72 kDa type IV collagenase isoform b [Homo sapiens]
          Length = 610

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 92  DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 151

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 152 GGDSHFDDDELWTL 165


>gi|397480515|ref|XP_003811527.1| PREDICTED: 72 kDa type IV collagenase isoform 1 [Pan paniscus]
 gi|426382210|ref|XP_004057706.1| PREDICTED: 72 kDa type IV collagenase isoform 2 [Gorilla gorilla
           gorilla]
          Length = 610

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 92  DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 151

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 152 GGDSHFDDDELWTL 165


>gi|109128541|ref|XP_001087814.1| PREDICTED: 72 kDa type IV collagenase isoform 3 [Macaca mulatta]
          Length = 610

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 92  DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 151

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 152 GGDSHFDDDELWTL 165


>gi|355756781|gb|EHH60389.1| 72 kDa type IV collagenase [Macaca fascicularis]
          Length = 642

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 124 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 183

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 184 GGDSHFDDDELWTL 197


>gi|344287827|ref|XP_003415653.1| PREDICTED: macrophage metalloelastase [Loxodonta africana]
          Length = 470

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+++Y     R++    +++A  VWS  + LTFR++    ADI+I+F +  H D Y
Sbjct: 114 HITYRIQNYTPDMAREDVNYAIQKAFQVWSDVTPLTFRQIYAGEADIMIFFAQGAHGDFY 173

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDG G ++AHAF PG+G GGD HFD  E W
Sbjct: 174 PFDGRGGVIAHAFAPGTGIGGDTHFDESEIW 204


>gi|426382214|ref|XP_004057708.1| PREDICTED: 72 kDa type IV collagenase isoform 4 [Gorilla gorilla
           gorilla]
          Length = 634

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 116 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 175

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 176 GGDSHFDDDELWTL 189


>gi|444725602|gb|ELW66163.1| 72 kDa type IV collagenase [Tupaia chinensis]
          Length = 697

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 114 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 173

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 174 GGDSHFDDDELWTL 187


>gi|5771541|dbj|BAA83518.1| matrilysin [Sus scrofa]
          Length = 267

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 5/99 (5%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL +WS    L+F++V+   ADI+I F +  H D YPFDGPG  LAHAF PG G GG
Sbjct: 129 VTKALKMWSNEIPLSFKKVSWGIADIIIGFARGAHGDAYPFDGPGNTLAHAFAPGPGLGG 188

Query: 82  DAHFDIDEDWM---VLGVS--RSANADEGKSLELANADE 115
           DAHFD DE W     +G++   +A  + G SL LA++ +
Sbjct: 189 DAHFDEDEHWSDGGSIGINFLYAATHELGHSLGLAHSSD 227


>gi|339906122|ref|YP_004732919.1| hypothetical protein WIV_gp136 [Wiseana iridescent virus]
 gi|308051993|gb|ADO00480.1| hypothetical protein [Wiseana iridescent virus]
          Length = 346

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)

Query: 29  WSKHSKLTFREV-NDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAHFDI 87
           W+  S ++ +EV   + ++I I F K NH D +PFDGPG+ILAHAFFPGSGRGGD HFDI
Sbjct: 156 WANTSLISIQEVFTKEESNITIQFLKGNHGDNWPFDGPGQILAHAFFPGSGRGGDVHFDI 215

Query: 88  DEDWMV 93
           +E W +
Sbjct: 216 EEMWTL 221


>gi|355702809|gb|AES02055.1| matrix metallopeptidase 7 [Mustela putorius furo]
          Length = 238

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 64/111 (57%), Gaps = 5/111 (4%)

Query: 10  VRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKIL 69
            R   R  +   + +AL +WS+   L+FR V    ADI+I F +  H D YPFDGPG  L
Sbjct: 90  TRDLPRVTVNQLVSKALALWSREIPLSFRRVLAGTADIMIGFARGAHGDYYPFDGPGNTL 149

Query: 70  AHAFFPGSGRGGDAHFDIDEDWM---VLGVS--RSANADEGKSLELANADE 115
           AHAF PG G GGDAHFD DE W     LGV+   +A  + G SL L ++ +
Sbjct: 150 AHAFAPGPGLGGDAHFDEDERWTDGSRLGVNFLVTATHELGHSLGLGHSSD 200


>gi|334311810|ref|XP_001373030.2| PREDICTED: 72 kDa type IV collagenase-like [Monodelphis domestica]
          Length = 662

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARAFKVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|426247903|ref|XP_004017711.1| PREDICTED: stromelysin-3 [Ovis aries]
          Length = 421

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 52/79 (65%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++R  +  AL VWS  + LTF EV++  ADI+I F +  H D  PFDGPG ILAHAFF
Sbjct: 112 REQVRQTVAEALRVWSDVTPLTFTEVHEGHADIVIDFTRYWHGDNLPFDGPGGILAHAFF 171

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           P + R GD HFD DE W +
Sbjct: 172 PKTHREGDVHFDYDETWTI 190


>gi|351709279|gb|EHB12198.1| 72 kDa type IV collagenase [Heterocephalus glaber]
          Length = 662

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RAL VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 142 DAFARALQVWSDVTPLRFSLIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|297708400|ref|XP_002830961.1| PREDICTED: stromelysin-3, partial [Pongo abelii]
          Length = 452

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 52/77 (67%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           +++  +  AL VWS  + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 89  QVQQMMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFFPK 148

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 149 THREGDVHFDYDETWTI 165


>gi|395505962|ref|XP_003757305.1| PREDICTED: 72 kDa type IV collagenase [Sarcophilus harrisii]
          Length = 664

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARAFKVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|126296429|ref|XP_001374085.1| PREDICTED: matrix metalloproteinase-9-like [Monodelphis domestica]
          Length = 886

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/88 (51%), Positives = 53/88 (60%), Gaps = 4/88 (4%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D  +RA  +WSK + LTF  V+   ADILI F    H DGYPFDG   +LAHAF PG G 
Sbjct: 320 DAFQRAFALWSKVTPLTFTRVSSGEADILIQFGTREHGDGYPFDGKDGLLAHAFPPGPGI 379

Query: 80  GGDAHFDIDEDWM----VLGVSRSANAD 103
            GDAHFD +E W     V+  +R  NAD
Sbjct: 380 QGDAHFDDEEFWTLGKGVVVKTRFGNAD 407


>gi|296236895|ref|XP_002807973.1| PREDICTED: LOW QUALITY PROTEIN: stromelysin-3 [Callithrix jacchus]
          Length = 591

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 51/77 (66%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++  ADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 228 QVRQTMAEALRVWSDVTPLTFTEVHEGHADIMIDFARYWHGDNLPFDGPGGILAHAFFPK 287

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 288 THREGDVHFDYDETWTI 304


>gi|355702812|gb|AES02056.1| matrix metallopeptidase 8 [Mustela putorius furo]
          Length = 247

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 50/86 (58%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           K         + + +++A  VWS  S LTF + +   ADI I F + +H D  PFDGP  
Sbjct: 53  KYTTQLSEADVEESIKKAFQVWSNASPLTFTKTSQGEADIKITFVQGDHGDNSPFDGPNG 112

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDWMV 93
           ILAHAF PG G GGDAHFD DE W +
Sbjct: 113 ILAHAFQPGQGVGGDAHFDEDEIWTM 138


>gi|348563977|ref|XP_003467783.1| PREDICTED: matrix metalloproteinase-24-like [Cavia porcellus]
          Length = 715

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 255 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 314

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 315 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 344


>gi|149733599|ref|XP_001499275.1| PREDICTED: matrix metalloproteinase-24 [Equus caballus]
          Length = 666

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 206 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 265

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 266 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 295


>gi|23200042|pdb|1EAK|A Chain A, Catalytic Domain Of Prommp-2 E404q Mutant
 gi|23200043|pdb|1EAK|B Chain B, Catalytic Domain Of Prommp-2 E404q Mutant
 gi|23200044|pdb|1EAK|C Chain C, Catalytic Domain Of Prommp-2 E404q Mutant
 gi|23200045|pdb|1EAK|D Chain D, Catalytic Domain Of Prommp-2 E404q Mutant
          Length = 421

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 111 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 170

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 171 GGDSHFDDDELWTL 184


>gi|194376948|dbj|BAG63035.1| unnamed protein product [Homo sapiens]
          Length = 584

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 66  DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 125

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 126 GGDSHFDDDELWTL 139


>gi|397480517|ref|XP_003811528.1| PREDICTED: 72 kDa type IV collagenase isoform 2 [Pan paniscus]
 gi|426382212|ref|XP_004057707.1| PREDICTED: 72 kDa type IV collagenase isoform 3 [Gorilla gorilla
           gorilla]
          Length = 584

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 66  DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 125

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 126 GGDSHFDDDELWTL 139


>gi|431916539|gb|ELK16517.1| Matrix metalloproteinase-27 [Pteropus alecto]
          Length = 980

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A +VWS  S+LTF +V+   ADI I F +  H D  PFDGP  ILAHAF PG G GG
Sbjct: 122 IEKAFEVWSNASQLTFTKVSQGEADINIAFAQRAHGDNSPFDGPNGILAHAFQPGLGIGG 181

Query: 82  DAHFDIDEDW 91
           DAHFD +E W
Sbjct: 182 DAHFDAEETW 191



 Score = 68.9 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 5/106 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWD-GYPFDGPGKILAHAF 73
           R  + + +++ L+VWSK + L F +++   ADI+I F    H      FDGP  +L HAF
Sbjct: 591 RADVDEAIQKGLEVWSKVTPLIFSKISKGIADIMIAFRTRVHGRCPRHFDGPLGVLGHAF 650

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
            PG G GGD HFD DE+W   G   +    A  + G SL L+++++
Sbjct: 651 PPGLGLGGDTHFDEDENWTKDGAGFNLFLVAAHEFGHSLGLSHSND 696


>gi|109128543|ref|XP_001087335.1| PREDICTED: 72 kDa type IV collagenase isoform 1 [Macaca mulatta]
          Length = 584

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 66  DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 125

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 126 GGDSHFDDDELWTL 139


>gi|432094888|gb|ELK26296.1| Stromelysin-3 [Myotis davidii]
          Length = 469

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 16/122 (13%)

Query: 9   RVRHYDRGRLRDELRR----ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+  Y    +R++++R    AL +WS+ + LTF EV +  ADI+I F +  H D  PFDG
Sbjct: 94  RILRYPWQLVREQVQRTMAEALKLWSEVTPLTFTEVYEGHADIMIDFTRYWHGDDLPFDG 153

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE-----GRRH 119
           PG +LAHAFFP + R GD HFD DE W +         ++G  L L  A E     G +H
Sbjct: 154 PGGVLAHAFFPKTNREGDVHFDYDETWTI-------GDNQGTDLLLVAAHEFGHILGLQH 206

Query: 120 VT 121
            T
Sbjct: 207 TT 208


>gi|395814634|ref|XP_003780850.1| PREDICTED: interstitial collagenase-like [Otolemur garnettii]
          Length = 403

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 49/119 (41%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     +  + D + +A  +WS  S LTF +V   +ADI+I F + +H D  
Sbjct: 47  HLTYRIENYTPDLPKADVDDAIEKAFQLWSNASPLTFTKVFQGQADIMISFVRGDHRDNS 106

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 107 PFDGPGGNLAHAFQPGPGIGGDAHFDEDEKWTNNLRNYNLYRVAAHELGHSLGLSHSTD 165


>gi|331284133|ref|NP_001193566.1| stromelysin-1 precursor [Bos taurus]
          Length = 477

 Score = 84.7 bits (208), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y +   RD     + +AL VW + + LTF  + +  ADI+I F    H D  
Sbjct: 113 HLTYRIVNYTKDLPRDAVDSAIEKALTVWEEATPLTFSRIYEGEADIMIIFAIREHGDFL 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPGK+LAHA+ PGSG  GDAHFD DE W
Sbjct: 173 PFDGPGKVLAHAYPPGSGFYGDAHFDDDEQW 203


>gi|301752878|ref|XP_002912329.1| PREDICTED: 72 kDa type IV collagenase-like, partial [Ailuropoda
           melanoleuca]
          Length = 625

 Score = 84.7 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 134 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 193

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 194 GGDSHFDDDELWTL 207


>gi|261244994|ref|NP_001159652.1| 72 kDa type IV collagenase precursor [Ovis aries]
 gi|256665395|gb|ACV04843.1| matrix metallopeptidase 2 [Ovis aries]
          Length = 661

 Score = 84.7 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 143 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 202

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 203 GGDSHFDDDELWTL 216


>gi|90076374|dbj|BAE87867.1| unnamed protein product [Macaca fascicularis]
          Length = 581

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG+G 
Sbjct: 66  DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGV 125

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 126 GGDSHFDDDELWTL 139


>gi|426244417|ref|XP_004016019.1| PREDICTED: stromelysin-1 [Ovis aries]
          Length = 477

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y +   RD     + +AL VW + + LTF  + +  ADI+I F    H D  
Sbjct: 113 HLTYRIVNYTKDLPRDAVDSAIEKALTVWEEVTPLTFSRIYEGEADIMIIFAVREHGDFL 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPGK+LAHA+ PGSG  GDAHFD DE W
Sbjct: 173 PFDGPGKVLAHAYPPGSGFYGDAHFDDDEQW 203


>gi|402912083|ref|XP_003918617.1| PREDICTED: stromelysin-3 [Papio anubis]
          Length = 488

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 51/77 (66%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++  ADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 125 QVRQTMAEALKVWSDVTPLTFTEVHEGHADIMIDFARYWHGDDLPFDGPGGILAHAFFPK 184

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 185 THREGDVHFDYDETWTI 201


>gi|344289255|ref|XP_003416360.1| PREDICTED: 72 kDa type IV collagenase [Loxodonta africana]
          Length = 660

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 142 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|387017030|gb|AFJ50633.1| Matrix metallopeptidase 2 [Crotalus adamanteus]
          Length = 672

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/80 (50%), Positives = 49/80 (61%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 150 DSETVDDAFARAFKVWSDVTPLEFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAF 209

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG G GGD+HFD DE W +
Sbjct: 210 APGPGVGGDSHFDDDELWTL 229


>gi|296477900|tpg|DAA20015.1| TPA: 72 kDa type IV collagenase precursor [Bos taurus]
          Length = 661

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 143 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 202

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 203 GGDSHFDDDELWTL 216


>gi|151556868|gb|AAI49405.1| Matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa
           type IV collagenase) [Bos taurus]
 gi|440910028|gb|ELR59862.1| 72 kDa type IV collagenase [Bos grunniens mutus]
          Length = 661

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 143 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 202

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 203 GGDSHFDDDELWTL 216


>gi|440912887|gb|ELR62412.1| Stromelysin-1, partial [Bos grunniens mutus]
          Length = 447

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y +   RD     + +AL VW + + LTF  + +  ADI+I F    H D  
Sbjct: 115 HLTYRIVNYTKDLPRDAVDSAIEKALTVWEEVTPLTFSRIYEGEADIMIIFAVREHGDFL 174

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPGK+LAHA+ PGSG  GDAHFD DE W
Sbjct: 175 PFDGPGKVLAHAYPPGSGFYGDAHFDDDEQW 205


>gi|47211622|emb|CAF95801.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 629

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/80 (48%), Positives = 48/80 (60%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  + D  ADI++ F +  H DGYPFDG   +LAHAF
Sbjct: 108 DEEVINDAFFRAFKVWSDVTPLQFTRIMDGEADIMVNFGRNEHGDGYPFDGKDGLLAHAF 167

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG G GGD+HFD DE W +
Sbjct: 168 APGPGIGGDSHFDDDEQWTL 187


>gi|395814628|ref|XP_003780847.1| PREDICTED: neutrophil collagenase [Otolemur garnettii]
          Length = 465

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 4/98 (4%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A +VWSK S LTF +     ADI I F +++H D  PFDGP  ILAHAF PG G GG
Sbjct: 133 IEKAFEVWSKASPLTFTKTAQGEADIKIAFVQKDHGDNSPFDGPNGILAHAFQPGQGIGG 192

Query: 82  DAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           D HFD +E W    ++ +    A  + G SL L+++ +
Sbjct: 193 DVHFDEEETWTTTSINYNLFLVAAHEFGHSLGLSHSSD 230


>gi|348508354|ref|XP_003441719.1| PREDICTED: matrix metalloproteinase-20-like [Oreochromis niloticus]
          Length = 416

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 48/74 (64%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           +   +R AL +WS  + L F ++N  +ADI+  F +  H D +PFDGPG +LAHAF PG 
Sbjct: 134 VEKSVRSALKMWSDATPLKFIKINHRKADIVFSFSRRTHGDFFPFDGPGGVLAHAFMPGM 193

Query: 78  GRGGDAHFDIDEDW 91
           G GGD HFD DE W
Sbjct: 194 GMGGDVHFDEDETW 207


>gi|109094826|ref|XP_001083910.1| PREDICTED: stromelysin-3 [Macaca mulatta]
          Length = 488

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 51/77 (66%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++  ADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 125 QVRQTMAEALKVWSDVTPLTFTEVHEGHADIMIDFARYWHGDDLPFDGPGGILAHAFFPK 184

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 185 THREGDVHFDYDETWTI 201


>gi|74218057|dbj|BAE42011.1| unnamed protein product [Mus musculus]
          Length = 465

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/89 (47%), Positives = 51/89 (57%), Gaps = 4/89 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           + H P+      R  ++  + +A  VWS  S LTF E+    ADI I F   +H D  PF
Sbjct: 118 INHTPQ----LSRAEVKTAIEKAFHVWSVASPLTFTEILQGEADINIAFVSRDHGDNSPF 173

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           DGP  ILAHAF PG G GGDAHFD +E W
Sbjct: 174 DGPNGILAHAFQPGQGIGGDAHFDSEETW 202


>gi|26354468|dbj|BAC40862.1| unnamed protein product [Mus musculus]
          Length = 465

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/89 (47%), Positives = 51/89 (57%), Gaps = 4/89 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           + H P+      R  ++  + +A  VWS  S LTF E+    ADI I F   +H D  PF
Sbjct: 118 INHTPQ----LSRAEVKTAIEKAFHVWSVASPLTFTEILQGEADINIAFVSRDHGDNSPF 173

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           DGP  ILAHAF PG G GGDAHFD +E W
Sbjct: 174 DGPNGILAHAFQPGQGIGGDAHFDSEETW 202


>gi|395520442|ref|XP_003764339.1| PREDICTED: collagenase 3 [Sarcophilus harrisii]
          Length = 506

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/94 (46%), Positives = 56/94 (59%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+AL VWS  + L F  +++  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 140 IRKALKVWSDVTPLNFTRLHNGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 199

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         N+ +G +L L  A E
Sbjct: 200 DAHFDDDEMW--------TNSAKGYNLFLVAAHE 225


>gi|355569445|gb|EHH25439.1| hypothetical protein EGK_21211, partial [Macaca mulatta]
 gi|355768512|gb|EHH62726.1| hypothetical protein EGM_21155, partial [Macaca fascicularis]
          Length = 452

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 51/77 (66%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++  ADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 89  QVRQTMAEALKVWSDVTPLTFTEVHEGHADIMIDFARYWHGDDLPFDGPGGILAHAFFPK 148

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 149 THREGDVHFDYDETWTI 165


>gi|62897521|dbj|BAD96700.1| matrix metalloproteinase 7 preproprotein variant [Homo sapiens]
          Length = 267

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 48/70 (68%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL++W K   L FR+V    ADI+I F +  H D YPFDGPG  LAHAF PG+G GG
Sbjct: 129 VSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGG 188

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 189 DAHFDEDERW 198


>gi|432894407|ref|XP_004075978.1| PREDICTED: collagenase 3-like [Oryzias latipes]
          Length = 469

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 51/70 (72%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+AL+VWS  + LTFR+++D  ADI+I F    H D  PFDGP  +LAHA+ PG+G GG
Sbjct: 136 IRQALNVWSAVTPLTFRKLHDGTADIMISFGSREHGDFNPFDGPDGLLAHAYPPGAGIGG 195

Query: 82  DAHFDIDEDW 91
           D HFD DE+W
Sbjct: 196 DVHFDEDENW 205


>gi|4505219|ref|NP_002414.1| matrilysin preproprotein [Homo sapiens]
 gi|116861|sp|P09237.1|MMP7_HUMAN RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
           Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
           Full=Pump-1 protease; AltName: Full=Uterine
           metalloproteinase; Flags: Precursor
 gi|35799|emb|CAA30678.1| unnamed protein product [Homo sapiens]
 gi|35803|emb|CAA77942.1| PUMP [Homo sapiens]
 gi|54781375|gb|AAV40839.1| matrix metalloproteinase 7 (matrilysin, uterine) [Homo sapiens]
 gi|119587427|gb|EAW67023.1| matrix metallopeptidase 7 (matrilysin, uterine) [Homo sapiens]
          Length = 267

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 48/70 (68%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL++W K   L FR+V    ADI+I F +  H D YPFDGPG  LAHAF PG+G GG
Sbjct: 129 VSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGG 188

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 189 DAHFDEDERW 198


>gi|296480369|tpg|DAA22484.1| TPA: matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Bos
           taurus]
          Length = 477

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y +   RD     + +AL VW + + LTF  + +  ADI+I F    H D  
Sbjct: 113 HLTYRIVNYTKDLPRDAVDSAIEKALTVWEEVTPLTFSRIYEGEADIMIIFAIREHGDFL 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPGK+LAHA+ PGSG  GDAHFD DE W
Sbjct: 173 PFDGPGKVLAHAYPPGSGFYGDAHFDDDEQW 203


>gi|74213270|dbj|BAE41762.1| unnamed protein product [Mus musculus]
          Length = 465

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/89 (47%), Positives = 51/89 (57%), Gaps = 4/89 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           + H P+      R  ++  + +A  VWS  S LTF E+    ADI I F   +H D  PF
Sbjct: 118 INHTPQ----LSRAEVKTAIEKAFHVWSVASPLTFTEILQGEADINIAFVSRDHGDNSPF 173

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           DGP  ILAHAF PG G GGDAHFD +E W
Sbjct: 174 DGPNGILAHAFQPGQGIGGDAHFDSEETW 202


>gi|74147434|dbj|BAE42564.1| unnamed protein product [Mus musculus]
          Length = 465

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/89 (47%), Positives = 51/89 (57%), Gaps = 4/89 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           + H P+      R  ++  + +A  VWS  S LTF E+    ADI I F   +H D  PF
Sbjct: 118 INHTPQ----LSRAEVKTAIEKAFHVWSVASPLTFTEILQGEADINIAFVSRDHGDNSPF 173

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           DGP  ILAHAF PG G GGDAHFD +E W
Sbjct: 174 DGPNGILAHAFQPGQGIGGDAHFDSEETW 202


>gi|3025475|gb|AAC12707.1| neutrophil collagenase [Mus musculus]
          Length = 465

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/89 (47%), Positives = 51/89 (57%), Gaps = 4/89 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           + H P+      R  ++  + +A  VWS  S LTF E+    ADI I F   +H D  PF
Sbjct: 118 INHTPQ----LSRAEVKTAIEKAFHVWSVASPLTFTEILQGEADINIAFVSRDHGDNSPF 173

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           DGP  ILAHAF PG G GGDAHFD +E W
Sbjct: 174 DGPNGILAHAFQPGQGIGGDAHFDSEETW 202


>gi|160333381|ref|NP_032637.3| neutrophil collagenase precursor [Mus musculus]
 gi|341940959|sp|O70138.2|MMP8_MOUSE RecName: Full=Neutrophil collagenase; AltName: Full=Collagenase 2;
           AltName: Full=Matrix metalloproteinase-8; Short=MMP-8;
           Flags: Precursor
 gi|3327014|emb|CAA73786.1| collagenase-2 [Mus musculus]
 gi|26354354|dbj|BAC40805.1| unnamed protein product [Mus musculus]
 gi|27503132|gb|AAH42742.1| Matrix metallopeptidase 8 [Mus musculus]
 gi|74192000|dbj|BAE32938.1| unnamed protein product [Mus musculus]
 gi|74210332|dbj|BAE23365.1| unnamed protein product [Mus musculus]
 gi|148692990|gb|EDL24937.1| matrix metallopeptidase 8 [Mus musculus]
          Length = 465

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/89 (47%), Positives = 51/89 (57%), Gaps = 4/89 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           + H P+      R  ++  + +A  VWS  S LTF E+    ADI I F   +H D  PF
Sbjct: 118 INHTPQ----LSRAEVKTAIEKAFHVWSVASPLTFTEILQGEADINIAFVSRDHGDNSPF 173

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           DGP  ILAHAF PG G GGDAHFD +E W
Sbjct: 174 DGPNGILAHAFQPGQGIGGDAHFDSEETW 202


>gi|26354566|dbj|BAC40911.1| unnamed protein product [Mus musculus]
          Length = 465

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/89 (47%), Positives = 51/89 (57%), Gaps = 4/89 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           + H P+      R  ++  + +A  VWS  S LTF E+    ADI I F   +H D  PF
Sbjct: 118 INHTPQ----LSRAEVKTAIEKAFHVWSVASPLTFTEILQGEADINIAFVSRDHGDNSPF 173

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           DGP  ILAHAF PG G GGDAHFD +E W
Sbjct: 174 DGPNGILAHAFQPGQGIGGDAHFDSEETW 202


>gi|327269126|ref|XP_003219346.1| PREDICTED: matrilysin-like [Anolis carolinensis]
          Length = 423

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 46/94 (48%), Positives = 52/94 (55%), Gaps = 9/94 (9%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           L  A+ VWS  + L F +  D  ADI IYF ++ H D YPFDG G  LAHAF PG G  G
Sbjct: 133 LAEAIKVWSDVTPLKFTKTTDT-ADIDIYFARDEHGDNYPFDGVGGTLAHAFAPGKGLAG 191

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W           DEG SL +  A E
Sbjct: 192 DAHFDDDEYW--------TEDDEGTSLFIVAAHE 217


>gi|348021|gb|AAC37543.1| matrilysin [Homo sapiens]
 gi|13177712|gb|AAH03635.1| Matrix metallopeptidase 7 (matrilysin, uterine) [Homo sapiens]
 gi|60816397|gb|AAX36381.1| matrix metalloproteinase 7 [synthetic construct]
 gi|60817901|gb|AAX36443.1| matrix metalloproteinase 7 [synthetic construct]
 gi|61358328|gb|AAX41549.1| matrix metalloproteinase 7 [synthetic construct]
 gi|61358920|gb|AAX41641.1| matrix metalloproteinase 7 [synthetic construct]
 gi|123992912|gb|ABM84058.1| matrix metallopeptidase 7 (matrilysin, uterine) [synthetic
           construct]
 gi|157928550|gb|ABW03571.1| matrix metallopeptidase 7 (matrilysin, uterine) [synthetic
           construct]
 gi|261860302|dbj|BAI46673.1| matrix metallopeptidase 7 [synthetic construct]
          Length = 267

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 48/70 (68%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL++W K   L FR+V    ADI+I F +  H D YPFDGPG  LAHAF PG+G GG
Sbjct: 129 VSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGG 188

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 189 DAHFDEDERW 198


>gi|326671416|ref|XP_683002.5| PREDICTED: matrix metalloproteinase-18-like [Danio rerio]
          Length = 770

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/80 (47%), Positives = 49/80 (61%)

Query: 16  GRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFP 75
            R++   R+A  +W++ + L FR      ADI+I F  ++H DG PFDG G ILAHAF P
Sbjct: 379 ARVKTAFRQAWQLWAQAAPLKFRRKRRSDADIVISFNNKDHNDGSPFDGEGGILAHAFSP 438

Query: 76  GSGRGGDAHFDIDEDWMVLG 95
           G G GGD HFD +E W   G
Sbjct: 439 GPGIGGDVHFDDEETWTTNG 458


>gi|169731509|gb|ACA64881.1| matrix metalloproteinase 24 preproprotein (predicted) [Callicebus
           moloch]
          Length = 595

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 135 RKAIRQAFDVWQKVTPLTFEEVPYHEVKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 194

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 195 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 224


>gi|149020725|gb|EDL78530.1| matrix metallopeptidase 8 [Rattus norvegicus]
          Length = 466

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 4/89 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           + H P+      +  ++ E+ +A  +WS  S LTF E  +  ADI I F   +H D  PF
Sbjct: 119 INHTPQ----MSKAEVKTEIEKAFKIWSVPSTLTFTETLEGEADINIAFVSRDHGDNSPF 174

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           DGP  ILAHAF PG G GGDAHFD +E W
Sbjct: 175 DGPNGILAHAFQPGRGIGGDAHFDSEETW 203


>gi|7688731|gb|AAF67517.1|AF177217_1 matrix metalloproteinase-2 [Canis lupus familiaris]
          Length = 632

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 114 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 173

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 174 GGDSHFDDDELWTL 187


>gi|11560008|ref|NP_071557.1| neutrophil collagenase precursor [Rattus norvegicus]
 gi|5921827|sp|O88766.1|MMP8_RAT RecName: Full=Neutrophil collagenase; AltName: Full=Matrix
           metalloproteinase-8; Short=MMP-8; Flags: Precursor
 gi|3242321|emb|CAA07432.1| collagenase [Rattus norvegicus]
          Length = 466

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 4/89 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           + H P+      +  ++ E+ +A  +WS  S LTF E  +  ADI I F   +H D  PF
Sbjct: 119 INHTPQ----MSKAEVKTEIEKAFKIWSVPSTLTFTETLEGEADINIAFVSRDHGDNSPF 174

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           DGP  ILAHAF PG G GGDAHFD +E W
Sbjct: 175 DGPNGILAHAFQPGRGIGGDAHFDSEETW 203


>gi|351714235|gb|EHB17154.1| Matrix metalloproteinase-24 [Heterocephalus glaber]
          Length = 492

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 33  RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 92

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 93  AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 122


>gi|281346622|gb|EFB22206.1| hypothetical protein PANDA_000009 [Ailuropoda melanoleuca]
          Length = 598

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 91  DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 150

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 151 GGDSHFDDDELWTL 164


>gi|397516426|ref|XP_003828431.1| PREDICTED: matrilysin [Pan paniscus]
          Length = 267

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 48/70 (68%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL++W K   L FR+V    ADI+I F +  H D YPFDGPG  LAHAF PG+G GG
Sbjct: 129 VSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGG 188

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 189 DAHFDEDERW 198


>gi|61368429|gb|AAX43178.1| matrix metalloproteinase 7 [synthetic construct]
 gi|61369114|gb|AAX43287.1| matrix metalloproteinase 7 [synthetic construct]
          Length = 268

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 48/70 (68%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL++W K   L FR+V    ADI+I F +  H D YPFDGPG  LAHAF PG+G GG
Sbjct: 129 VSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGG 188

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 189 DAHFDEDERW 198


>gi|74214893|dbj|BAE33455.1| unnamed protein product [Mus musculus]
          Length = 465

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/89 (47%), Positives = 51/89 (57%), Gaps = 4/89 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           + H P+      R  ++  + +A  VWS  S LTF E+    ADI I F   +H D  PF
Sbjct: 118 INHTPQ----LSRAEVKTAIEKAFHVWSVASPLTFTEILQGEADINIAFVSRDHGDNSPF 173

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           DGP  ILAHAF PG G GGDAHFD +E W
Sbjct: 174 DGPNGILAHAFQPGQGIGGDAHFDSEETW 202


>gi|441638792|ref|XP_004093216.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-24
           [Nomascus leucogenys]
          Length = 591

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 131 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 190

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 191 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 220


>gi|395505352|ref|XP_003757006.1| PREDICTED: matrix metalloproteinase-24 [Sarcophilus harrisii]
          Length = 656

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 197 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 256

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 257 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 286


>gi|426391481|ref|XP_004062101.1| PREDICTED: matrix metalloproteinase-24 [Gorilla gorilla gorilla]
          Length = 595

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 135 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 194

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 195 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 224


>gi|397523763|ref|XP_003831888.1| PREDICTED: matrix metalloproteinase-24 [Pan paniscus]
          Length = 596

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 136 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 195

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 196 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 225


>gi|395506131|ref|XP_003757389.1| PREDICTED: matrix metalloproteinase-9 [Sarcophilus harrisii]
          Length = 783

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/88 (50%), Positives = 53/88 (60%), Gaps = 4/88 (4%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D  +RA  +WS  + LTF  ++   ADILI F  + H DGYPFDG   +LAHAF PG G 
Sbjct: 214 DAFKRAFALWSSVTPLTFTRLSSGDADILIRFGTKEHGDGYPFDGKDGLLAHAFPPGPGI 273

Query: 80  GGDAHFDIDEDWM----VLGVSRSANAD 103
            GDAHFD DE W     V+  +R  NAD
Sbjct: 274 QGDAHFDDDEFWTLGKGVVVQTRFGNAD 301


>gi|199652449|gb|ACH91676.1| matrix metallopeptidase 1 [Sus scrofa]
          Length = 469

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 49/119 (41%), Positives = 71/119 (59%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R+++ RA++    +WS  S LTF +V++ +ADI+I F + ++ D  
Sbjct: 113 HLTYRIENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVSEGQADIMISFVRGDNRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMV----LGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTKNFRDYNLYRVAAHELGHSLGLSHSTD 231


>gi|281182734|ref|NP_001162479.1| matrix metalloproteinase-24 [Papio anubis]
 gi|297259948|ref|XP_001100890.2| PREDICTED: matrix metalloproteinase-24 [Macaca mulatta]
 gi|164623742|gb|ABY64668.1| matrix metallopeptidase 24 (predicted) [Papio anubis]
          Length = 598

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 138 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 197

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 198 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 227


>gi|149030869|gb|EDL85896.1| matrix metallopeptidase 24 [Rattus norvegicus]
          Length = 514

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 33  RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 92

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 93  AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 122


>gi|332208024|ref|XP_003253096.1| PREDICTED: interstitial collagenase isoform 1 [Nomascus leucogenys]
          Length = 470

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 114 HLTYRIENYTPDLPRADVDHAIEKAFKLWSNVTPLTFTKVSEGQADIMISFVRGDHQDNS 173

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 174 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHELGHSLGLSHSTD 232


>gi|73853842|ref|NP_001027506.1| matrix metallopeptidase 13 (collagenase 3) precursor [Xenopus
           (Silurana) tropicalis]
 gi|67867494|gb|AAH98086.1| hypothetical protein mgc108008 [Xenopus (Silurana) tropicalis]
          Length = 261

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 40/77 (51%), Positives = 49/77 (63%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + + +R A  VWS  + L F  ++  RADI+I F   +H D  PFDGP  +LAHAF 
Sbjct: 120 RSMVDEAIRLAFKVWSDVTPLKFTRISSRRADIMIQFGARSHGDFIPFDGPNGVLAHAFA 179

Query: 75  PGSGRGGDAHFDIDEDW 91
           PGSG GGDAHFD DE W
Sbjct: 180 PGSGIGGDAHFDEDERW 196


>gi|116860|sp|P03957.1|MMP3_RAT RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
           metalloproteinase-3; Short=MMP-3; AltName: Full=PTR1
           protein; AltName: Full=Transin-1; Flags: Precursor
 gi|57461|emb|CAA26448.1| unnamed protein product [Rattus norvegicus]
          Length = 475

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + RAL VW + + LTF  +++  ADI+I F  E H D  
Sbjct: 111 HISYRIVNYTLDLPRESVDSAIERALKVWEEVTPLTFSRISEGEADIMISFAVEEHGDFI 170

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG +LAHA+ PG G  GDAHFD DE W
Sbjct: 171 PFDGPGMVLAHAYAPGPGTNGDAHFDDDERW 201


>gi|185134733|ref|NP_001117842.1| matrix metalloproteinase-9 precursor [Oncorhynchus mykiss]
 gi|20160306|emb|CAC85923.1| matrix metalloproteinase 9 [Oncorhynchus mykiss]
          Length = 675

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/74 (54%), Positives = 48/74 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + LTF  + D  ADI++ F K +H DGYPFDG   +LAHAF PG G 
Sbjct: 140 DAFARAFKVWSDVTPLTFTRLFDGIADIMVSFGKADHGDGYPFDGKDGLLAHAFPPGEGI 199

Query: 80  GGDAHFDIDEDWMV 93
            GDAHFD DE+W +
Sbjct: 200 QGDAHFDDDENWTL 213


>gi|351709965|gb|EHB12884.1| Neutrophil collagenase [Heterocephalus glaber]
          Length = 470

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 4/89 (4%)

Query: 9   RVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y     +  +   + +A   WS  S LTF    +  ADI I F + +H D  PFDG
Sbjct: 119 RIRNYTPQLFQADVETAIEKAFQTWSAASPLTFTRTTEGEADINIAFVQRDHGDNSPFDG 178

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           P  ILAHAF PG G GGDAHFD +E W +
Sbjct: 179 PNGILAHAFQPGQGIGGDAHFDAEETWTI 207


>gi|301773288|ref|XP_002922069.1| PREDICTED: neutrophil collagenase-like [Ailuropoda melanoleuca]
          Length = 475

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/84 (45%), Positives = 48/84 (57%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           K  +      +   +++A  VWS  S LTF +++    DI I F + +H D  PFDGP  
Sbjct: 130 KYTKQLSEADVETAIKKAFQVWSNASPLTFTKISQGEPDIKIAFVRGDHGDNSPFDGPNG 189

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDW 91
           ILAHAF PG G GGD HFD DE W
Sbjct: 190 ILAHAFQPGQGIGGDVHFDADETW 213


>gi|47212184|emb|CAF95132.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 710

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 48/102 (47%), Positives = 55/102 (53%), Gaps = 5/102 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           ++  PK      R  +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 204 VRSFPKDSPSLGRDTVRALMHYALKVWSDIAPLDFHEVAGSDADIQIDFTKADHRDGYPF 263

Query: 63  DGPGKILAHAFFPGSG-RGGDAHFDIDEDWMVLGVSRSANAD 103
           DGPG  +AHAFFPG     GD HFD DE W      RS  AD
Sbjct: 264 DGPGGTVAHAFFPGEKFTAGDTHFDDDEAWTF----RSPEAD 301


>gi|184185552|gb|ACC68950.1| matrix metalloproteinase 24 preproprotein (predicted) [Rhinolophus
           ferrumequinum]
          Length = 547

 Score = 84.3 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 87  RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 146

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 147 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 176


>gi|332138104|pdb|2Y6D|A Chain A, The Discovery Of Mmp7 Inhibitors Exploiting A Novel
           Selectivity Trigger
          Length = 174

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 5/99 (5%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL++W K   L FR+V    ADI+I F +  H D YPFDGPG  LAHAF PG+G GG
Sbjct: 36  VSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGG 95

Query: 82  DAHFDIDEDWM---VLGVS--RSANADEGKSLELANADE 115
           DAHFD DE W     LG++   +A  + G SL + ++ +
Sbjct: 96  DAHFDEDERWTDGSSLGINFLYAATHELGHSLGMGHSSD 134


>gi|126723289|ref|NP_001075964.1| stromelysin-1 precursor [Equus caballus]
 gi|7387585|sp|Q28397.1|MMP3_HORSE RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
           metalloproteinase-3; Short=MMP-3; Flags: Precursor
 gi|1480746|gb|AAB05774.1| matrix metalloproteinase 3 [Equus caballus]
          Length = 477

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRD----ELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y +   RD    ++ +AL +W + + LTF  + +  ADI+I F    H D +
Sbjct: 113 HLTYRIVNYTQDLPRDAVDSDVEKALKIWEEVTPLTFSRIYEGEADIMITFAVREHGDFF 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPGK+LAHA+ PG G  GDAHFD DE W
Sbjct: 173 PFDGPGKVLAHAYPPGPGMNGDAHFDDDEHW 203


>gi|326670156|ref|XP_692205.5| PREDICTED: stromelysin-3 [Danio rerio]
          Length = 501

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 50/77 (64%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R   + AL VWS  + LTF EV +  ADI+I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 134 KVRRIFQEALKVWSDVTPLTFTEVVNQEADIVIDFTRYWHGDNLPFDGPGGILAHAFFPR 193

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W V
Sbjct: 194 THREGDIHFDYDESWTV 210


>gi|403281382|ref|XP_003932167.1| PREDICTED: matrix metalloproteinase-24 [Saimiri boliviensis
           boliviensis]
          Length = 596

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 136 RKAIRQAFDVWQKVTPLTFEEVPYHEVKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 195

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 196 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 225


>gi|348508352|ref|XP_003441718.1| PREDICTED: collagenase 3-like [Oreochromis niloticus]
          Length = 460

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 50/70 (71%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +RRAL+VW+  + LTF+++ +  ADI+I F  + H D  PFDGPG +LAHA+ PG G GG
Sbjct: 128 IRRALNVWADVTPLTFKKLYEGNADIMISFGSKEHGDYNPFDGPGGLLAHAYPPGQGIGG 187

Query: 82  DAHFDIDEDW 91
           D HFD DE W
Sbjct: 188 DTHFDEDEQW 197


>gi|126030231|pdb|2DDY|A Chain A, Solution Structure Of Matrilysin (Mmp-7) Complexed To
           Constraint Conformational Sulfonamide Inhibitor
          Length = 173

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 5/99 (5%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL++W K   L FR+V    ADI+I F +  H D YPFDGPG  LAHAF PG+G GG
Sbjct: 35  VSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGG 94

Query: 82  DAHFDIDEDWM---VLGVS--RSANADEGKSLELANADE 115
           DAHFD DE W     LG++   +A  + G SL + ++ +
Sbjct: 95  DAHFDEDERWTDGSSLGINFLYAATHELGHSLGMGHSSD 133


>gi|1431757|pdb|1MMP|A Chain A, Matrilysin Complexed With Carboxylate Inhibitor
 gi|1431758|pdb|1MMP|B Chain B, Matrilysin Complexed With Carboxylate Inhibitor
 gi|157832012|pdb|1MMQ|A Chain A, Matrilysin Complexed With Hydroxamate Inhibitor
 gi|157832013|pdb|1MMR|A Chain A, Matrilysin Complexed With Sulfodiimine Inhibitor
          Length = 170

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 5/99 (5%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL++W K   L FR+V    ADI+I F +  H D YPFDGPG  LAHAF PG+G GG
Sbjct: 35  VSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGG 94

Query: 82  DAHFDIDEDWM---VLGVS--RSANADEGKSLELANADE 115
           DAHFD DE W     LG++   +A  + G SL + ++ +
Sbjct: 95  DAHFDEDERWTDGSSLGINFLYAATHELGHSLGMGHSSD 133


>gi|364087490|gb|AEW46994.1| matrix metallopeptidase 2 [Callorhinchus milii]
          Length = 662

 Score = 84.0 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 44/94 (46%), Positives = 54/94 (57%), Gaps = 4/94 (4%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  + D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 136 DSETVDDAFARAFGVWSSVTPLKFTRLFDGEADIMINFGRLEHGDGYPFDGKDGLLAHAF 195

Query: 74  FPGSGRGGDAHFDIDEDWMV----LGVSRSANAD 103
            PG G GGD+HFD DE W +    +  +R  NAD
Sbjct: 196 APGKGIGGDSHFDDDEFWTLGEGQVIKARFGNAD 229


>gi|355563190|gb|EHH19752.1| Matrix metalloproteinase-24, partial [Macaca mulatta]
 gi|355784545|gb|EHH65396.1| Matrix metalloproteinase-24, partial [Macaca fascicularis]
          Length = 564

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 104 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 163

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 164 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 193


>gi|332208026|ref|XP_003253097.1| PREDICTED: interstitial collagenase isoform 2 [Nomascus leucogenys]
          Length = 403

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 47  HLTYRIENYTPDLPRADVDHAIEKAFKLWSNVTPLTFTKVSEGQADIMISFVRGDHQDNS 106

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 107 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHELGHSLGLSHSTD 165


>gi|47523462|ref|NP_999357.1| 72 kDa type IV collagenase precursor [Sus scrofa]
 gi|15419710|gb|AAK97133.1|AF295805_1 gelatinase A [Sus scrofa]
 gi|224466302|gb|ACN44193.1| matrix metalloproteinase-2 [Sus scrofa]
 gi|224466304|gb|ACN44194.1| matrix metalloproteinase-2 [Sus scrofa]
          Length = 661

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 143 DAFARAFRVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 202

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 203 GGDSHFDDDELWTL 216


>gi|345794260|ref|XP_535300.3| PREDICTED: 72 kDa type IV collagenase [Canis lupus familiaris]
          Length = 584

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 66  DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 125

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 126 GGDSHFDDDELWTL 139


>gi|119596628|gb|EAW76222.1| matrix metallopeptidase 24 (membrane-inserted) [Homo sapiens]
          Length = 532

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 72  RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 131

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 132 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 161


>gi|444729163|gb|ELW69590.1| Matrix metalloproteinase-24 [Tupaia chinensis]
          Length = 532

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 72  RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 131

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 132 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 161


>gi|332138103|pdb|2Y6C|A Chain A, The Discovery Of Mmp7 Inhibitors Exploiting A Novel
           Selectivity Trigger
          Length = 165

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 5/99 (5%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL++W K   L FR+V    ADI+I F +  H D YPFDGPG  LAHAF PG+G GG
Sbjct: 36  VSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGG 95

Query: 82  DAHFDIDEDWM---VLGVS--RSANADEGKSLELANADE 115
           DAHFD DE W     LG++   +A  + G SL + ++ +
Sbjct: 96  DAHFDEDERWTDGSSLGINFLYAATHELGHSLGMGHSSD 134


>gi|217038328|gb|ACJ76621.1| matrix metalloproteinase 24 preproprotein (predicted) [Oryctolagus
           cuniculus]
          Length = 532

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 72  RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 131

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 132 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 161


>gi|326914432|ref|XP_003203529.1| PREDICTED: interstitial collagenase-like [Meleagris gallopavo]
          Length = 466

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 3/87 (3%)

Query: 5   HHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           ++ +++R  D   + + +++AL+VWS  + LTF+ + D  ADI+I F   +H D  PFDG
Sbjct: 120 NYTRKMRQTD---VDEAIQKALNVWSSVTPLTFQRIEDKIADIMISFAYRDHNDNSPFDG 176

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PG +LAHAF PG G GGD H D +E W
Sbjct: 177 PGGLLAHAFQPGEGLGGDVHMDEEETW 203


>gi|35505497|gb|AAH57788.1| Matrix metallopeptidase 11 (stromelysin 3) [Homo sapiens]
          Length = 488

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 51/77 (66%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++ RADI+I F +  H D  PFDGPG ILAHAF P 
Sbjct: 125 QVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFSPK 184

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 185 THREGDVHFDYDETWTI 201


>gi|403262929|ref|XP_003923817.1| PREDICTED: stromelysin-1 [Saimiri boliviensis boliviensis]
          Length = 477

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPGK+LAHA+ PG G  G
Sbjct: 134 IEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGKVLAHAYAPGPGING 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDDDEQW 203


>gi|440912886|gb|ELR62411.1| Macrophage metalloelastase, partial [Bos grunniens mutus]
          Length = 474

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 48/72 (66%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D  ++A  VWS  + L FR+V+D+ ADI+I F    H D Y FDGP  ILAHAF PG+G 
Sbjct: 137 DAFQKAFQVWSDVTPLKFRKVHDNEADIMIRFAFREHGDAYSFDGPWGILAHAFAPGAGL 196

Query: 80  GGDAHFDIDEDW 91
           GGDAHFD  E W
Sbjct: 197 GGDAHFDEAETW 208


>gi|331284141|ref|NP_001193569.1| macrophage metalloelastase precursor [Bos taurus]
 gi|296480368|tpg|DAA22483.1| TPA: matrix metallopeptidase 12-like [Bos taurus]
          Length = 471

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 48/72 (66%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D  ++A  VWS  + L FR+V+D+ ADI+I F    H D Y FDGP  ILAHAF PG+G 
Sbjct: 133 DAFQKAFQVWSDVTPLKFRKVHDNEADIMIRFAFREHGDAYSFDGPWGILAHAFAPGAGL 192

Query: 80  GGDAHFDIDEDW 91
           GGDAHFD  E W
Sbjct: 193 GGDAHFDEAETW 204


>gi|296216039|ref|XP_002754394.1| PREDICTED: matrilysin [Callithrix jacchus]
          Length = 267

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/87 (50%), Positives = 52/87 (59%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDELRR----ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+  Y R   R  + R    AL++W K   L FR++    ADI+I F +  H D YPFDG
Sbjct: 112 RIMSYTRDLPRITVERLVSKALNMWGKEIPLRFRKLPWGTADIMIGFARGAHGDPYPFDG 171

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PG  LAHAF PG G GGDAHFD DE W
Sbjct: 172 PGNTLAHAFAPGPGLGGDAHFDEDERW 198


>gi|348573593|ref|XP_003472575.1| PREDICTED: LOW QUALITY PROTEIN: interstitial collagenase-like
           [Cavia porcellus]
          Length = 472

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/70 (52%), Positives = 45/70 (64%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  +WS+ S LTF  ++   ADI+I F +  H D  PFDGPG  LAHAF PG   GG
Sbjct: 134 FRKAFQIWSEVSALTFTRISQGEADIMITFIRGEHGDNNPFDGPGNKLAHAFGPGPRLGG 193

Query: 82  DAHFDIDEDW 91
           D HFD+DE W
Sbjct: 194 DVHFDLDETW 203


>gi|297690056|ref|XP_002822443.1| PREDICTED: matrilysin [Pongo abelii]
          Length = 267

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL++W K   L FR+V    ADI+I F +  H D YPFDGPG  LAHAF PG G GG
Sbjct: 129 VSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDAYPFDGPGNTLAHAFAPGKGLGG 188

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 189 DAHFDEDERW 198


>gi|58176727|pdb|1SU3|A Chain A, X-Ray Structure Of Human Prommp-1: New Insights Into
           Collagenase Action
 gi|58176728|pdb|1SU3|B Chain B, X-Ray Structure Of Human Prommp-1: New Insights Into
           Collagenase Action
          Length = 450

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 94  HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 153

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 154 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTD 212


>gi|4835862|gb|AAD30274.1| MMP-1 protein [Bos taurus]
          Length = 174

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 68/115 (59%), Gaps = 8/115 (6%)

Query: 9   RVRHY----DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  PFDG
Sbjct: 21  RIENYTPDLSRADVDQAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDG 80

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV----LGVSRSANADEGKSLELANADE 115
           PG  LAHAF PG+G GGDAHFD DE W        + R A  + G SL LA++ +
Sbjct: 81  PGGNLAHAFQPGAGIGGDAHFDDDEWWTSNFQDYNLYRVAAHEFGHSLGLAHSTD 135


>gi|410983529|ref|XP_003998091.1| PREDICTED: 72 kDa type IV collagenase [Felis catus]
          Length = 584

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 66  DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 125

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 126 GGDSHFDDDELWTL 139


>gi|293597556|ref|NP_598207.2| stromelysin-1 preproprotein [Rattus norvegicus]
 gi|149020729|gb|EDL78534.1| rCG31785, isoform CRA_a [Rattus norvegicus]
 gi|149020730|gb|EDL78535.1| rCG31785, isoform CRA_a [Rattus norvegicus]
          Length = 475

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + RAL VW + + LTF  +++  ADI+I F  E H D  
Sbjct: 111 HISYRIVNYTLDLPRESVDSAIERALKVWEEVTPLTFSRISEGEADIMISFAVEEHGDFI 170

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG +LAHA+ PG G  GDAHFD DE W
Sbjct: 171 PFDGPGMVLAHAYAPGPGINGDAHFDDDERW 201


>gi|149699545|ref|XP_001493331.1| PREDICTED: 72 kDa type IV collagenase [Equus caballus]
          Length = 609

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 93  DAFARAFRVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 152

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 153 GGDSHFDDDELWTL 166


>gi|297269060|ref|XP_001097508.2| PREDICTED: matrilysin [Macaca mulatta]
 gi|402895046|ref|XP_003910646.1| PREDICTED: LOW QUALITY PROTEIN: matrilysin [Papio anubis]
 gi|355566059|gb|EHH22488.1| hypothetical protein EGK_05766 [Macaca mulatta]
 gi|355752574|gb|EHH56694.1| hypothetical protein EGM_06157 [Macaca fascicularis]
          Length = 270

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 3/82 (3%)

Query: 10  VRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKIL 69
           + H+   RL   + +AL++W K   L FR+V    ADI+I F +  H D YPFDGPG  L
Sbjct: 123 LPHFTVDRL---VSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDPYPFDGPGNTL 179

Query: 70  AHAFFPGSGRGGDAHFDIDEDW 91
           AHAF PG G GGDAHFD DE W
Sbjct: 180 AHAFAPGPGLGGDAHFDEDERW 201


>gi|345322976|ref|XP_003430660.1| PREDICTED: interstitial collagenase-like isoform 5 [Ornithorhynchus
           anatinus]
          Length = 472

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/84 (47%), Positives = 51/84 (60%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           K  RH  +  +   +++A  VWSK S LTF +V  + ADI+I F   +H+D  PF GP  
Sbjct: 143 KYTRHLSKADVDMAIKKAFQVWSKVSPLTFTKVWKEEADIMISFFSGDHYDNSPFYGPDG 202

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDW 91
           +LAHAF PG   GGD HFD DE W
Sbjct: 203 VLAHAFPPGKLIGGDIHFDEDETW 226


>gi|444724336|gb|ELW64943.1| Matrilysin [Tupaia chinensis]
          Length = 262

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 49/82 (59%)

Query: 10  VRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKIL 69
            R   R ++   + +A  +W K   L FR+V    ADI++ F    H D YPFDGPG  L
Sbjct: 114 TRDLPRFQVDQIVAKAFQMWGKVIPLNFRKVERGIADIILRFAVGVHGDPYPFDGPGNTL 173

Query: 70  AHAFFPGSGRGGDAHFDIDEDW 91
           AHAFFPG G GGDAHFD DE W
Sbjct: 174 AHAFFPGPGLGGDAHFDDDETW 195


>gi|441645194|ref|XP_003253514.2| PREDICTED: LOW QUALITY PROTEIN: neutrophil collagenase [Nomascus
           leucogenys]
          Length = 434

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHY----DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+R+Y     +  +   + +A  VWS  S LTF  ++   ADI I F + +H D  
Sbjct: 79  HLTHRIRNYTPQLSKADVERAIEKAFKVWSDASPLTFTRISQGEADINIAFFQRDHGDNS 138

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           PFDGP  ILAHAF  G G GGDAHFD +E W     + +    A  + G SL LA++ +
Sbjct: 139 PFDGPNGILAHAFRXGQGIGGDAHFDAEETWTKTSTNYNLFLVAAHEFGHSLGLAHSSD 197


>gi|426370254|ref|XP_004052083.1| PREDICTED: interstitial collagenase isoform 1 [Gorilla gorilla
           gorilla]
          Length = 469

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHELGHSLGLSHSTD 231


>gi|297690065|ref|XP_002822446.1| PREDICTED: interstitial collagenase isoform 1 [Pongo abelii]
          Length = 469

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHELGHSLGLSHSTD 231


>gi|301773282|ref|XP_002922067.1| PREDICTED: matrilysin-like [Ailuropoda melanoleuca]
          Length = 267

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 49/77 (63%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R R+   + +AL +WS+   L+FR V    ADI+I F +  H D  PFDGPG  LAHAF 
Sbjct: 122 RVRVNQLVAKALAMWSQEIPLSFRRVLAGTADIMISFARGAHGDYNPFDGPGNTLAHAFA 181

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G GGDAHFD DE W
Sbjct: 182 PGPGLGGDAHFDEDEHW 198


>gi|431916542|gb|ELK16520.1| Stromelysin-1 [Pteropus alecto]
          Length = 358

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 51/87 (58%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     RD     + +AL VW + + LTF  + +  ADILI F    H D  PFDG
Sbjct: 110 RIVNYTLDLPRDAVDSAIEKALKVWEEVTPLTFSRIYEGEADILITFAAREHGDFIPFDG 169

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PG +LAHAF PG G  GDAHFD DE W
Sbjct: 170 PGMVLAHAFSPGPGINGDAHFDDDEKW 196


>gi|327269197|ref|XP_003219381.1| PREDICTED: stromelysin-1-like [Anolis carolinensis]
          Length = 461

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/71 (56%), Positives = 47/71 (66%)

Query: 21  ELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRG 80
           ++ RA  VWS+ S LTF  V    ADILI F   +H D  PFDGPG  +AHA+ P SG G
Sbjct: 128 DIERAFKVWSRVSPLTFTRVLQGDADILISFGSRDHGDFNPFDGPGGTVAHAYAPSSGIG 187

Query: 81  GDAHFDIDEDW 91
           GDAHFD DE+W
Sbjct: 188 GDAHFDEDENW 198


>gi|47227660|emb|CAG09657.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 401

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/77 (51%), Positives = 50/77 (64%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R   R AL +WS  + LTF E++  +ADI I F +  H D  PFDGPG ILAHAFFP 
Sbjct: 52  KVRRVFREALKIWSDVTPLTFTEIHSGKADIRIDFTRYWHGDNLPFDGPGGILAHAFFPK 111

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R GD HFD DE W +
Sbjct: 112 THRQGDIHFDYDESWTL 128


>gi|431916540|gb|ELK16518.1| Stromelysin-2 [Pteropus alecto]
          Length = 468

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 51/87 (58%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     RD     + +AL VW + + LTF  + +  ADILI F    H D  PFDG
Sbjct: 118 RIVNYTLDLPRDAVDSAIEKALKVWEEVTPLTFSRIYEGEADILITFAAREHGDFIPFDG 177

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PG +LAHAF PG G  GDAHFD DE W
Sbjct: 178 PGMVLAHAFSPGPGINGDAHFDDDEKW 204


>gi|359072657|ref|XP_002692980.2| PREDICTED: neutrophil collagenase [Bos taurus]
          Length = 470

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 44/70 (62%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  A  VWSK S LTF    D+ ADI I F + +H D  PFDGP  ILAHAF PG G GG
Sbjct: 136 IEEAFKVWSKVSPLTFNRTLDEEADIQISFAQRDHGDNSPFDGPDGILAHAFQPGPGIGG 195

Query: 82  DAHFDIDEDW 91
           D HFD +E W
Sbjct: 196 DVHFDAEETW 205


>gi|449282290|gb|EMC89143.1| Matrix metalloproteinase-24, partial [Columba livia]
          Length = 571

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW + + LTF EV      +DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 111 RRAIRQAFDVWQRVTPLTFEEVPYHEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 170

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 171 AYFPGPGIGGDTHFDSDEPWTLGNSNHDGN 200


>gi|187607872|ref|NP_001120324.1| uncharacterized protein LOC100145387 precursor [Xenopus (Silurana)
           tropicalis]
 gi|166797027|gb|AAI59193.1| Mmp13 protein [Danio rerio]
 gi|170284421|gb|AAI60951.1| LOC100145387 protein [Xenopus (Silurana) tropicalis]
          Length = 476

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 45/70 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D + RAL VWS  + L F  +    ADI+I+F   +H DGYPFDGP   LAHA+ P  G 
Sbjct: 136 DSISRALKVWSDVTPLRFTRIYSGTADIMIFFATGDHGDGYPFDGPNGFLAHAYPPYEGV 195

Query: 80  GGDAHFDIDE 89
           GGDAHFD DE
Sbjct: 196 GGDAHFDDDE 205


>gi|345322972|ref|XP_003430658.1| PREDICTED: interstitial collagenase-like isoform 3 [Ornithorhynchus
           anatinus]
 gi|345322974|ref|XP_003430659.1| PREDICTED: interstitial collagenase-like isoform 4 [Ornithorhynchus
           anatinus]
          Length = 469

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/84 (47%), Positives = 51/84 (60%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           K  RH  +  +   +++A  VWSK S LTF +V  + ADI+I F   +H+D  PF GP  
Sbjct: 117 KYTRHLSKADVDMAIKKAFQVWSKVSPLTFTKVWKEEADIMISFFSGDHYDNSPFYGPDG 176

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDW 91
           +LAHAF PG   GGD HFD DE W
Sbjct: 177 VLAHAFPPGKLIGGDIHFDEDETW 200


>gi|363741721|ref|XP_417326.3| PREDICTED: matrix metalloproteinase-24 [Gallus gallus]
          Length = 991

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW + + LTF EV      +DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 531 RRAIRQAFDVWQRVTPLTFEEVPYHEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 590

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 591 AYFPGPGIGGDTHFDSDEPWTLGNSNHDGN 620


>gi|326931703|ref|XP_003211965.1| PREDICTED: matrix metalloproteinase-24-like [Meleagris gallopavo]
          Length = 557

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW + + LTF EV      +DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 122 RRAIRQAFDVWQRVTPLTFEEVPYHEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 181

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 182 AYFPGPGIGGDTHFDSDEPWTLGNSNHDGN 211


>gi|291195937|gb|ADD84682.1| matrix metalloproteinase 13 [Ictalurus punctatus]
          Length = 471

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/68 (55%), Positives = 47/68 (69%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           ++RAL VW++ + L F+ +    ADI+I F   +H DG PFDGP   LAHAFFPG G GG
Sbjct: 135 IQRALQVWARVTPLKFKRIYSGIADIMISFVVGDHRDGSPFDGPNGFLAHAFFPGVGIGG 194

Query: 82  DAHFDIDE 89
           DAHFD DE
Sbjct: 195 DAHFDDDE 202


>gi|62897673|dbj|BAD96776.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
          Length = 405

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 49  HLTYRIENYTPDLPRADVDHVIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 108

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 109 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTD 167


>gi|432952937|ref|XP_004085252.1| PREDICTED: LOW QUALITY PROTEIN: stromelysin-3-like, partial
           [Oryzias latipes]
          Length = 393

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 51/86 (59%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           K   H    ++R   R AL +WS  + LTF EV   + DI I F +  H D  PFDGPG 
Sbjct: 36  KSPPHMGEEKVRRIFREALKIWSDVTPLTFTEVRSGKTDISIDFRRYWHGDNLPFDGPGG 95

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDWMV 93
           ILAHAF+P + R GD HFD+DE W +
Sbjct: 96  ILAHAFYPKTHRQGDVHFDLDETWTL 121


>gi|109108468|ref|XP_001098400.1| PREDICTED: stromelysin-1 isoform 1 [Macaca mulatta]
          Length = 477

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDEL----RRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y R   +D +     +A+ VW + + LTF  + +  ADI+I F    H D Y
Sbjct: 113 HLTYRIVNYTRDLPKDAIDSAIEKAVKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFY 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG +LAHA+ PG G  GDAHFD DE W
Sbjct: 173 PFDGPGNVLAHAYAPGPGINGDAHFDDDEQW 203


>gi|355566993|gb|EHH23372.1| hypothetical protein EGK_06827 [Macaca mulatta]
 gi|355752581|gb|EHH56701.1| hypothetical protein EGM_06164 [Macaca fascicularis]
          Length = 477

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDEL----RRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y R   +D +     +A+ VW + + LTF  + +  ADI+I F    H D Y
Sbjct: 113 HLTYRIVNYTRDLPKDAIDSAIEKAVKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFY 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG +LAHA+ PG G  GDAHFD DE W
Sbjct: 173 PFDGPGNVLAHAYAPGPGINGDAHFDDDEQW 203


>gi|332837591|ref|XP_003313324.1| PREDICTED: interstitial collagenase isoform 1 [Pan troglodytes]
          Length = 403

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 47  HLTYRIENYTPDLPRADVDHAIAKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 106

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 107 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHELGHSLGLSHSTD 165


>gi|403262927|ref|XP_003923816.1| PREDICTED: interstitial collagenase-like [Saimiri boliviensis
           boliviensis]
          Length = 469

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V   +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLRRADVDHAIEKAFQLWSNVTPLTFTKVPKGQADIMISFVRGDHQDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDETWTNNFREYNLYRVAAHELGHSLGLSHSTD 231


>gi|426370260|ref|XP_004052086.1| PREDICTED: stromelysin-1 [Gorilla gorilla gorilla]
          Length = 477

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 48/70 (68%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F ++ H D YPFDGPG +LAHA+ PG G  G
Sbjct: 134 VEKALKVWEEVTPLTFSRLYEGEADIMISFAEKEHGDFYPFDGPGNVLAHAYAPGPGING 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDDDEQW 203


>gi|60207620|gb|AAX14805.1| matrix metalloproteinase 9 [Notophthalmus viridescens]
          Length = 679

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/76 (51%), Positives = 48/76 (63%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           + D  RRA  VWS  S LTF ++    ADI+I F  ++H D YPFDG   +LAHA+ PG 
Sbjct: 138 IEDAFRRAFKVWSDVSPLTFTQIYSGEADIMILFGSDDHGDPYPFDGKDGLLAHAYPPGE 197

Query: 78  GRGGDAHFDIDEDWMV 93
           G  GDAHFD DE W +
Sbjct: 198 GVQGDAHFDDDEFWTL 213


>gi|410903229|ref|XP_003965096.1| PREDICTED: stromelysin-3-like [Takifugu rubripes]
          Length = 474

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 3/91 (3%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           + H P ++      +++  L+ A  VWS  + L F EV  D+ADI+I F +  H D  PF
Sbjct: 114 IVHFPWQM---SEAKVQHVLQEAFGVWSAVTPLRFHEVTSDKADIIIDFNRYWHGDNLPF 170

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           DGPG ILAHAFFP + R G+ HFD DE W V
Sbjct: 171 DGPGGILAHAFFPRTHRQGEVHFDYDEHWTV 201


>gi|395520411|ref|XP_003764326.1| PREDICTED: matrilysin [Sarcophilus harrisii]
          Length = 261

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/99 (49%), Positives = 62/99 (62%), Gaps = 5/99 (5%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +ALD+WSK S LTF++V    ADILI F +  H D  PFDG G ILAHAF PG   GG
Sbjct: 128 VEKALDMWSKASTLTFKKVRRGNADILIGFARGAHGDFNPFDGAGGILAHAFAPGIDLGG 187

Query: 82  DAHFDIDEDWM---VLGVS--RSANADEGKSLELANADE 115
           DAHFD DE W     LG++   +A  + G SL L ++ +
Sbjct: 188 DAHFDNDEQWTDGSKLGINFLFAATHELGHSLGLGHSSD 226


>gi|408833328|gb|AFU93060.1| matrix metalloproteinase 7, partial [Marmota monax]
          Length = 264

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/99 (47%), Positives = 60/99 (60%), Gaps = 5/99 (5%)

Query: 24  RALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDA 83
           +AL +WS+H  L F+ V    ADI+I F +  H D  PFDGPG  LAHAF PG G GGDA
Sbjct: 129 KALSMWSRHIPLRFKRVRMGTADIMIGFARGAHGDFLPFDGPGNTLAHAFAPGPGLGGDA 188

Query: 84  HFDIDEDWM---VLGVS--RSANADEGKSLELANADEGR 117
           HFD DE W     LG++   +A  + G SL L ++ + R
Sbjct: 189 HFDEDELWTDGSGLGINFLYAATHELGHSLGLGHSSDPR 227


>gi|281341728|gb|EFB17312.1| hypothetical protein PANDA_010999 [Ailuropoda melanoleuca]
          Length = 224

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 49/77 (63%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R R+   + +AL +WS+   L+FR V    ADI+I F +  H D  PFDGPG  LAHAF 
Sbjct: 87  RVRVNQLVAKALAMWSQEIPLSFRRVLAGTADIMISFARGAHGDYNPFDGPGNTLAHAFA 146

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G GGDAHFD DE W
Sbjct: 147 PGPGLGGDAHFDEDEHW 163


>gi|345322968|ref|XP_003430657.1| PREDICTED: interstitial collagenase-like isoform 2 [Ornithorhynchus
           anatinus]
          Length = 493

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/84 (47%), Positives = 51/84 (60%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           K  RH  +  +   +++A  VWSK S LTF +V  + ADI+I F   +H+D  PF GP  
Sbjct: 143 KYTRHLSKADVDMAIKKAFQVWSKVSPLTFTKVWKEEADIMISFFSGDHYDNSPFYGPDG 202

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDW 91
           +LAHAF PG   GGD HFD DE W
Sbjct: 203 VLAHAFPPGKLIGGDIHFDEDETW 226


>gi|114640096|ref|XP_508722.2| PREDICTED: interstitial collagenase isoform 3 [Pan troglodytes]
 gi|410207854|gb|JAA01146.1| matrix metallopeptidase 1 (interstitial collagenase) [Pan
           troglodytes]
 gi|410251316|gb|JAA13625.1| matrix metallopeptidase 1 (interstitial collagenase) [Pan
           troglodytes]
          Length = 469

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRADVDHAIAKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHELGHSLGLSHSTD 231


>gi|157832016|pdb|1MNC|A Chain A, Structure Of Human Neutrophil Collagenase Reveals Large
           S1' Specificity Pocket
          Length = 163

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 4/88 (4%)

Query: 9   RVRHYDRGRLRDELRRAL----DVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+    ++WS  S L F  ++   ADI I F + +H DG PFDG
Sbjct: 16  RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTGISQGEADINIAFYQRDHGDGSPFDG 75

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWM 92
           P  ILAHAF PG G GGDAHFD +E W 
Sbjct: 76  PNGILAHAFQPGQGIGGDAHFDAEETWT 103


>gi|114640115|ref|XP_508724.2| PREDICTED: macrophage metalloelastase [Pan troglodytes]
 gi|397516408|ref|XP_003828422.1| PREDICTED: macrophage metalloelastase [Pan paniscus]
          Length = 470

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 134 IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGG 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDEDEFW 203


>gi|426370262|ref|XP_004052087.1| PREDICTED: macrophage metalloelastase [Gorilla gorilla gorilla]
          Length = 470

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 134 IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGG 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDEDEFW 203


>gi|296480364|tpg|DAA22479.1| TPA: matrix metalloproteinase 8 preproprotein-like [Bos taurus]
          Length = 494

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 44/70 (62%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  A  VWSK S LTF    D+ ADI I F + +H D  PFDGP  ILAHAF PG G GG
Sbjct: 136 IEEAFKVWSKVSPLTFNRTLDEEADIQISFAQRDHGDNSPFDGPDGILAHAFQPGPGIGG 195

Query: 82  DAHFDIDEDW 91
           D HFD +E W
Sbjct: 196 DVHFDAEETW 205


>gi|146386384|gb|ABQ23980.1| membrane-type 5 matrix metalloproteinase [Oryctolagus cuniculus]
          Length = 198

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 38  RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 97

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 98  AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 127


>gi|1514961|dbj|BAA11523.1| gelatinase-b [Cynops pyrrhogaster]
          Length = 679

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/76 (51%), Positives = 48/76 (63%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           + D  RRA  VWS  S LTF ++    ADI+I F  ++H D YPFDG   +LAHA+ PG 
Sbjct: 138 IEDAFRRAFKVWSDVSPLTFTQIYSGEADIMILFGSDDHGDPYPFDGKDGLLAHAYPPGE 197

Query: 78  GRGGDAHFDIDEDWMV 93
           G  GDAHFD DE W +
Sbjct: 198 GVQGDAHFDDDEFWTL 213


>gi|449269767|gb|EMC80518.1| Matrilysin, partial [Columba livia]
          Length = 258

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/75 (54%), Positives = 49/75 (65%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++ D +RRA  VWS  + L F++V    ADI+I F +  H DGYPFDG G  LAHAF PG
Sbjct: 123 KVDDAIRRAFMVWSDVTPLRFKKVFYGHADIVIGFARRAHGDGYPFDGRGNTLAHAFAPG 182

Query: 77  SGRGGDAHFDIDEDW 91
            G GGD HFD DE W
Sbjct: 183 EGLGGDTHFDDDEIW 197


>gi|219518916|gb|AAI43774.1| Matrix metallopeptidase 12 (macrophage elastase) [Homo sapiens]
          Length = 470

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 134 IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGG 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDEDEFW 203


>gi|73858572|ref|NP_002417.2| macrophage metalloelastase preproprotein [Homo sapiens]
 gi|729179|sp|P39900.1|MMP12_HUMAN RecName: Full=Macrophage metalloelastase; Short=MME; AltName:
           Full=Macrophage elastase; Short=ME; Short=hME; AltName:
           Full=Matrix metalloproteinase-12; Short=MMP-12; Flags:
           Precursor
 gi|56788330|gb|AAW29944.1| matrix metalloproteinase 12 (macrophage elastase) [Homo sapiens]
 gi|85567332|gb|AAI12302.1| Matrix metalloproteinase 12, preproprotein [Homo sapiens]
 gi|119587437|gb|EAW67033.1| matrix metallopeptidase 12 (macrophage elastase) [Homo sapiens]
 gi|189054155|dbj|BAG36675.1| unnamed protein product [Homo sapiens]
 gi|307685507|dbj|BAJ20684.1| matrix metallopeptidase 12 [synthetic construct]
 gi|313883062|gb|ADR83017.1| matrix metallopeptidase 12 (macrophage elastase) [synthetic
           construct]
          Length = 470

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 134 IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGG 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDEDEFW 203


>gi|435970|gb|AAA58658.1| metalloproteinase [Homo sapiens]
          Length = 470

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 134 IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGG 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDEDEFW 203


>gi|345322970|ref|XP_001509119.2| PREDICTED: interstitial collagenase-like isoform 1 [Ornithorhynchus
           anatinus]
          Length = 491

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/84 (47%), Positives = 51/84 (60%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           K  RH  +  +   +++A  VWSK S LTF +V  + ADI+I F   +H+D  PF GP  
Sbjct: 143 KYTRHLSKADVDMAIKKAFQVWSKVSPLTFTKVWKEEADIMISFFSGDHYDNSPFYGPDG 202

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDW 91
           +LAHAF PG   GGD HFD DE W
Sbjct: 203 VLAHAFPPGKLIGGDIHFDEDETW 226


>gi|229368716|gb|ACQ62999.1| matrix metalloproteinase 24 preproprotein (predicted), 5 prime
           [Dasypus novemcinctus]
          Length = 245

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 103 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 162

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 163 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 192


>gi|211063451|ref|NP_001129963.1| matrilysin precursor [Ovis aries]
 gi|209571739|gb|ACI62525.1| matrix metallopeptidase 7 [Ovis aries]
          Length = 267

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A  +WS+   LTF+ V    ADI+I F +  H D YPFDGPG  LAHAF PG G GG
Sbjct: 129 VAKAFKIWSEVIPLTFKRVKWGTADIMIGFARRAHGDPYPFDGPGATLAHAFAPGPGLGG 188

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 189 DAHFDEDERW 198


>gi|213514500|ref|NP_001133996.1| Collagenase 3 precursor [Salmo salar]
 gi|209156092|gb|ACI34278.1| Collagenase 3 precursor [Salmo salar]
 gi|223647246|gb|ACN10381.1| Collagenase 3 precursor [Salmo salar]
 gi|223673123|gb|ACN12743.1| Collagenase 3 precursor [Salmo salar]
          Length = 473

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/96 (47%), Positives = 55/96 (57%), Gaps = 7/96 (7%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           + + RAL VW+K S L F  +    ADI+I F   NH D YPFDGP   LAHAF PG+  
Sbjct: 131 NSIERALQVWAKVSPLRFTRIYSGIADIMISFGTRNHGDSYPFDGPDGTLAHAFSPGADI 190

Query: 80  GGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           GGDAHFD DE       S S ++  G +L L  A E
Sbjct: 191 GGDAHFDDDE-------SFSFSSTRGYNLFLVAAHE 219


>gi|301626287|ref|XP_002942325.1| PREDICTED: matrix metalloproteinase-24-like [Xenopus (Silurana)
           tropicalis]
          Length = 592

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF E+      ++R  ADI+I+F    H D  PFDG G  LAH
Sbjct: 132 RKAIRQAFDVWQKVTPLTFEEIPYSEIKNERKEADIMIFFASGFHGDSSPFDGEGGFLAH 191

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 192 AYFPGPGIGGDTHFDSDEPWTLGNSNHDGN 221


>gi|449486132|ref|XP_002187137.2| PREDICTED: matrix metalloproteinase-24 [Taeniopygia guttata]
          Length = 548

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW + + LTF EV      +DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 88  RRAIRQAFDVWQRVTPLTFEEVPYHEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 147

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 148 AYFPGPGIGGDTHFDSDEPWTLGNSNHDGN 177


>gi|432101456|gb|ELK29638.1| Matrix metalloproteinase-24 [Myotis davidii]
          Length = 576

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/97 (51%), Positives = 57/97 (58%), Gaps = 11/97 (11%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 72  RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 131

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSL 108
           A+FPG G GGD HFD DE W  LG   +AN D   SL
Sbjct: 132 AYFPGPGIGGDTHFDSDEPW-TLG---NANHDAVASL 164


>gi|49900524|gb|AAH76545.1| Matrix metalloproteinase 2 [Danio rerio]
          Length = 657

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 48/80 (60%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  + D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 136 DEDTIDDAFYRAFKVWSDVTPLKFTRIMDGEADIMINFGRNEHGDGYPFDGKDGLLAHAF 195

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG G GGD+HFD DE W +
Sbjct: 196 APGPGIGGDSHFDDDEQWTL 215


>gi|344235389|gb|EGV91492.1| Matrix metalloproteinase-24 [Cricetulus griseus]
          Length = 140

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 22  RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 81

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 82  AYFPGPGIGGDTHFDSDEPWTL 103


>gi|37620187|ref|NP_932333.1| 72 kDa type IV collagenase precursor [Danio rerio]
 gi|32251074|gb|AAP74482.1| matrix metalloproteinase 2 [Danio rerio]
          Length = 657

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 48/80 (60%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  + D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 136 DEDTIDDAFYRAFKVWSDVTPLKFTRIMDGEADIMINFGRNEHGDGYPFDGKDGLLAHAF 195

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG G GGD+HFD DE W +
Sbjct: 196 APGPGIGGDSHFDDDEQWTL 215


>gi|348574157|ref|XP_003472857.1| PREDICTED: stromelysin-1 [Cavia porcellus]
          Length = 477

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/87 (48%), Positives = 53/87 (60%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           RV +Y +   RDE    + +AL VW++ + LTF  + D  ADI+I F    H D  PFDG
Sbjct: 117 RVVNYTQDLSRDEVDSAIEKALKVWAEVTPLTFSRIYDGEADIMISFAFREHGDYIPFDG 176

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PG +L HA+ PG G  GDAHFD DE W
Sbjct: 177 PGNVLGHAYAPGPGINGDAHFDDDELW 203


>gi|449484659|ref|XP_002198049.2| PREDICTED: 72 kDa type IV collagenase-like [Taeniopygia guttata]
          Length = 266

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 50/77 (64%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++ D ++RAL VWS  + L FR +    ADI I F +  H DG PFDG G  LAHAF 
Sbjct: 124 RRKVDDAIKRALKVWSDVTPLQFRRIYMGHADIEIRFARREHGDGAPFDGQGGTLAHAFE 183

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG+G GGDAHFD DE W
Sbjct: 184 PGNGIGGDAHFDDDEKW 200


>gi|431916537|gb|ELK16515.1| Matrilysin [Pteropus alecto]
          Length = 272

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 65/111 (58%), Gaps = 8/111 (7%)

Query: 10  VRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKIL 69
           + H+   +L   + +A ++WSK   L F+ +    ADI+I F +  H D YPFDGPG  L
Sbjct: 120 LSHFQVNQL---VEKAFEMWSKEIPLHFKRIRWGIADIMIGFARGAHGDSYPFDGPGNTL 176

Query: 70  AHAFFPGSGRGGDAHFDIDEDWM---VLGVS--RSANADEGKSLELANADE 115
           AHAF PG G GGDAHFD DE W     +G++   +A  + G SL L ++ +
Sbjct: 177 AHAFLPGPGLGGDAHFDEDERWTDGSSIGINFLYTATHELGHSLGLGHSSD 227


>gi|334330398|ref|XP_001366571.2| PREDICTED: matrilysin-like [Monodelphis domestica]
          Length = 208

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 5/106 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++   + +AL  WS+ S LTF++V    ADI I F +  H D YPFDGPG ILAHAF 
Sbjct: 69  RYKVDQLVEQALGKWSEVSALTFKKVLIGDADIRIGFARGAHGDFYPFDGPGGILAHAFE 128

Query: 75  PGSGRGGDAHFDIDEDW---MVLGVS--RSANADEGKSLELANADE 115
           PG G GGDAHFD DE W     LGV+   +A  + G SL L ++ +
Sbjct: 129 PGIGIGGDAHFDNDEQWSDGSQLGVNFLFAATHELGHSLGLGHSSD 174


>gi|297268618|ref|XP_001112141.2| PREDICTED: olfactory receptor 51L1 [Macaca mulatta]
          Length = 504

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/74 (47%), Positives = 48/74 (64%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           ++D +  A+ +WS  + L F++V ++ ADI I F +  H DG+PFDGPG IL HAF P S
Sbjct: 50  VKDSIYNAVSIWSNVTPLIFQQVQNEDADIKISFWQWAHEDGWPFDGPGGILGHAFLPNS 109

Query: 78  GRGGDAHFDIDEDW 91
           G  G  HFD +E W
Sbjct: 110 GNPGVVHFDKNEHW 123


>gi|332208022|ref|XP_003253094.1| PREDICTED: matrix metalloproteinase-20 [Nomascus leucogenys]
          Length = 483

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/69 (53%), Positives = 43/69 (62%)

Query: 25  ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
           AL  WS  + L+F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GGD H
Sbjct: 145 ALQAWSSAAPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTH 204

Query: 85  FDIDEDWMV 93
           FD  E W +
Sbjct: 205 FDNAEKWTM 213


>gi|344246665|gb|EGW02769.1| Matrix metalloproteinase-24 [Cricetulus griseus]
          Length = 552

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 84  RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 143

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 144 AYFPGPGIGGDTHFDSDEPWTL 165


>gi|440902964|gb|ELR53688.1| Neutrophil collagenase [Bos grunniens mutus]
          Length = 470

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 43/70 (61%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  A  VWSK S LTF    D  ADI I F + +H D  PFDGP  ILAHAF PG G GG
Sbjct: 136 IEEAFKVWSKVSPLTFNRTLDKEADIQISFAQRDHGDNSPFDGPDGILAHAFQPGPGIGG 195

Query: 82  DAHFDIDEDW 91
           D HFD +E W
Sbjct: 196 DVHFDAEETW 205


>gi|126352554|ref|NP_001075316.1| interstitial collagenase precursor [Equus caballus]
 gi|8469206|sp|Q9XSZ5.1|MMP1_HORSE RecName: Full=Interstitial collagenase; AltName: Full=Matrix
           metalloproteinase-1; Short=MMP-1; Flags: Precursor
 gi|5020116|gb|AAD38030.1|AF148882_1 matrix metalloproteinase 1 precursor [Equus caballus]
          Length = 469

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  S LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRADVDQAIEKAFQLWSNVSPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMV----LGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG   GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPRIGGDAHFDEDETWTSNFRNYNLYRVAAHEFGHSLGLSHSTD 231


>gi|73992282|ref|XP_542973.2| PREDICTED: matrix metalloproteinase-24 [Canis lupus familiaris]
          Length = 626

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 166 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 225

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 226 AYFPGPGIGGDTHFDSDEPWTL 247


>gi|354478000|ref|XP_003501204.1| PREDICTED: matrix metalloproteinase-24-like [Cricetulus griseus]
          Length = 611

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 151 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 210

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 211 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 240


>gi|83375894|gb|ABC17785.1| matrix metalloproteinase 24 variant [Homo sapiens]
          Length = 593

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 133 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 192

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 193 AYFPGPGIGGDTHFDSDEPWTL 214


>gi|395815729|ref|XP_003781376.1| PREDICTED: matrilysin [Otolemur garnettii]
          Length = 298

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL +W +H  L F+ V    ADI+I F +  H D YPFDGPG  LAHAF PG G GG
Sbjct: 129 VEKALKMWGRHIPLLFKRVRWGTADIMIGFARGAHGDYYPFDGPGNTLAHAFEPGPGLGG 188

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 189 DAHFDDDETW 198


>gi|296231097|ref|XP_002761063.1| PREDICTED: 72 kDa type IV collagenase [Callithrix jacchus]
          Length = 660

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/74 (51%), Positives = 46/74 (62%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF P  G 
Sbjct: 142 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFSPSPGI 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|5542534|pdb|3AYK|A Chain A, Catalytic Fragment Of Human Fibroblast Collagenase
           Complexed With Cgs-27023a, Nmr, Minimized Average
           Structure
 gi|5542566|pdb|4AYK|A Chain A, Catalytic Fragment Of Human Fibroblast Collagenase
           Complexed With Cgs-27023a, Nmr, 30 Structures
 gi|157830144|pdb|1AYK|A Chain A, Inhibitor-Free Catalytic Fragment Of Human Fibroblast
           Collagenase, Nmr, 30 Structures
 gi|157831323|pdb|1HFC|A Chain A, 1.56 Angstrom Structure Of Mature Truncated Human
           Fibroblast Collagenase
 gi|157834633|pdb|2AYK|A Chain A, Inhibitor-Free Catalytic Fragment Of Human Fibroblast
           Collagenase, Nmr, Minimized Average Structure
 gi|157836376|pdb|2TCL|A Chain A, Structure Of The Catalytic Domain Of Human Fibroblast
           Collagenase Complexed With An Inhibitor
 gi|999357|gb|AAB34887.1| truncated mature collagenase, mCL-t [human, fibroblast, Peptide
           Recombinant Partial, 169 aa]
          Length = 169

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 67/118 (56%), Gaps = 8/118 (6%)

Query: 4   KHHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDG 59
            H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D 
Sbjct: 12  THLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDN 71

Query: 60  YPFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANA 113
            PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++
Sbjct: 72  SPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHS 129


>gi|149716842|ref|XP_001498886.1| PREDICTED: neutrophil collagenase [Equus caballus]
          Length = 471

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/77 (49%), Positives = 47/77 (61%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +     RA + WS  S L F++++   ADI I F + +H D  PFDGP  ILAHAF 
Sbjct: 130 RADVERAFERAFEEWSIASSLKFKKISQGEADIRIAFYQGDHGDNSPFDGPNGILAHAFQ 189

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G GGDAHFD +E W
Sbjct: 190 PGPGIGGDAHFDAEETW 206


>gi|397516412|ref|XP_003828424.1| PREDICTED: interstitial collagenase-like isoform 2 [Pan paniscus]
          Length = 403

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 47  HLTYRIENYTPDLPRTDVDHAIAKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 106

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 107 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHELGHSLGLSHSTD 165


>gi|4191265|emb|CAA09055.1| MT5-MMP protein [Mus musculus]
          Length = 614

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 154 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 213

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 214 AYFPGPGIGGDTHFDSDEPWTL 235


>gi|296216045|ref|XP_002754391.1| PREDICTED: neutrophil collagenase [Callithrix jacchus]
          Length = 465

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/68 (55%), Positives = 44/68 (64%)

Query: 24  RALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDA 83
           +A  VWS  S LTF  ++   ADI I F + +H D  PFDGP  ILAHAF PG G GGDA
Sbjct: 135 KAFKVWSDASPLTFTRISQGEADINIAFFQRDHGDNSPFDGPNGILAHAFQPGRGIGGDA 194

Query: 84  HFDIDEDW 91
           HFD +E W
Sbjct: 195 HFDAEETW 202


>gi|326674248|ref|XP_002664668.2| PREDICTED: matrix metalloproteinase-20-like [Danio rerio]
          Length = 422

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 48/76 (63%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           + + L  AL +WS  + L F ++ + RADI   F  + H D +PFDGPG +LAHAF PG 
Sbjct: 115 VENSLHLALKIWSDAAPLKFVQIKEGRADITFSFNSKAHGDFFPFDGPGGVLAHAFEPGE 174

Query: 78  GRGGDAHFDIDEDWMV 93
           G GGD HFD DE W V
Sbjct: 175 GLGGDVHFDDDEIWTV 190


>gi|397516410|ref|XP_003828423.1| PREDICTED: interstitial collagenase-like isoform 1 [Pan paniscus]
          Length = 469

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRTDVDHAIAKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHELGHSLGLSHSTD 231


>gi|380798861|gb|AFE71306.1| matrix metalloproteinase-24 preproprotein, partial [Macaca mulatta]
          Length = 554

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 94  RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 153

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 154 AYFPGPGIGGDTHFDSDEPWTL 175


>gi|358421822|ref|XP_003585144.1| PREDICTED: neutrophil collagenase, partial [Bos taurus]
          Length = 264

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 44/70 (62%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  A  VWSK S LTF    D+ ADI I F + +H D  PFDGP  ILAHAF PG G GG
Sbjct: 136 IEEAFKVWSKVSPLTFNRTLDEEADIQISFAQRDHGDNSPFDGPDGILAHAFQPGPGIGG 195

Query: 82  DAHFDIDEDW 91
           D HFD +E W
Sbjct: 196 DVHFDAEETW 205


>gi|344279579|ref|XP_003411565.1| PREDICTED: matrix metalloproteinase-24 [Loxodonta africana]
          Length = 573

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 113 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 172

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 173 AYFPGPGIGGDTHFDSDEPWTL 194


>gi|291388662|ref|XP_002710873.1| PREDICTED: matrix metalloproteinase 24 [Oryctolagus cuniculus]
          Length = 574

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 114 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 173

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 174 AYFPGPGIGGDTHFDSDEPWTL 195


>gi|390462352|ref|XP_002747296.2| PREDICTED: matrix metalloproteinase-24 [Callithrix jacchus]
          Length = 601

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 141 RKAIRQAFDVWQKVTPLTFEEVPYHEVKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 200

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 201 AYFPGPGIGGDTHFDSDEPWTL 222


>gi|118138582|pdb|2J0T|A Chain A, Crystal Structure Of The Catalytic Domain Of Mmp-1 In
           Complex With The Inhibitory Domain Of Timp-1
 gi|118138583|pdb|2J0T|B Chain B, Crystal Structure Of The Catalytic Domain Of Mmp-1 In
           Complex With The Inhibitory Domain Of Timp-1
 gi|118138584|pdb|2J0T|C Chain C, Crystal Structure Of The Catalytic Domain Of Mmp-1 In
           Complex With The Inhibitory Domain Of Timp-1
          Length = 170

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 67/118 (56%), Gaps = 8/118 (6%)

Query: 4   KHHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDG 59
            H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D 
Sbjct: 13  THLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDN 72

Query: 60  YPFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANA 113
            PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++
Sbjct: 73  SPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHS 130


>gi|359071714|ref|XP_002692352.2| PREDICTED: matrix metalloproteinase-24 [Bos taurus]
          Length = 568

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 108 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 167

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 168 AYFPGPGIGGDTHFDSDEPWTL 189


>gi|301762074|ref|XP_002916480.1| PREDICTED: matrix metalloproteinase-24-like [Ailuropoda
           melanoleuca]
          Length = 630

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 170 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 229

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 230 AYFPGPGIGGDTHFDSDEPWTL 251


>gi|301610869|ref|XP_002934968.1| PREDICTED: matrix metalloproteinase-18-like [Xenopus (Silurana)
           tropicalis]
          Length = 466

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     +DE+ RA+     VWS  + LTF  + D  ADI I F  + H D YPFDG
Sbjct: 116 RILNYTPDMPKDEVDRAIQKAFKVWSDVTPLTFTRILDGVADIDISFAAQVHNDFYPFDG 175

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           P   LAHAF PG+  GGDAHFD DE+W
Sbjct: 176 PYGTLAHAFAPGNNIGGDAHFDEDENW 202


>gi|148674197|gb|EDL06144.1| matrix metallopeptidase 24 [Mus musculus]
          Length = 570

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 110 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 169

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 170 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 199


>gi|5729929|ref|NP_006681.1| matrix metalloproteinase-24 preproprotein [Homo sapiens]
 gi|332858203|ref|XP_003316927.1| PREDICTED: matrix metalloproteinase-24 [Pan troglodytes]
 gi|12585280|sp|Q9Y5R2.1|MMP24_HUMAN RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
           Full=Membrane-type matrix metalloproteinase 5;
           Short=MT-MMP 5; Short=MTMMP5; AltName:
           Full=Membrane-type-5 matrix metalloproteinase;
           Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
           Full=Processed matrix metalloproteinase-24; Flags:
           Precursor
 gi|5381386|gb|AAD42962.1|AF131284_1 membrane type 5 matrix metalloproteinase [Homo sapiens]
 gi|5689367|dbj|BAA82967.1| membrane-type-5 matrix metalloproteinase [Homo sapiens]
 gi|225000844|gb|AAI72450.1| Matrix metallopeptidase 24 (membrane-inserted) [synthetic
           construct]
          Length = 645

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 185 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 244

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 245 AYFPGPGIGGDTHFDSDEPWTL 266


>gi|10567286|dbj|BAB16112.1| matrix metalloproteinase-3 [Sus scrofa]
          Length = 139

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 50/77 (64%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +   + +AL +W + + LTF ++++  ADI+I F    H D  PFDGPGK+LAHA+ 
Sbjct: 63  RSVIDSTIEKALKIWEEVTPLTFSKISEGEADIMITFAVREHGDFSPFDGPGKVLAHAYA 122

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD DE W
Sbjct: 123 PGPGIYGDAHFDDDEQW 139


>gi|5689227|dbj|BAA82966.1| membrane-type-5 matrix metalloproteinase [Mus musculus]
          Length = 618

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 158 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 217

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 218 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 247


>gi|395830348|ref|XP_003788293.1| PREDICTED: matrix metalloproteinase-24 [Otolemur garnettii]
          Length = 617

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 157 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 216

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 217 AYFPGPGIGGDTHFDSDEPWTL 238


>gi|348524751|ref|XP_003449886.1| PREDICTED: collagenase 3-like [Oreochromis niloticus]
          Length = 472

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 5/101 (4%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D + +AL VW+K + L F  +    ADI+I F +  H D YPFDGP ++LAHAF PG G 
Sbjct: 131 DSIYKALQVWAKVTPLRFTRLYSGIADIMISFGRWEHGDYYPFDGPNEVLAHAFPPGPGI 190

Query: 80  GGDAHFDIDEDWMVLGVS-----RSANADEGKSLELANADE 115
           GGDAHFD DE +     +       A  + G SL L+++D+
Sbjct: 191 GGDAHFDEDETFTFRSSTGYVLFMVAAHEFGHSLGLSHSDD 231


>gi|12585266|sp|O13065.1|MMP18_XENLA RecName: Full=Matrix metalloproteinase-18; Short=MMP-18; AltName:
           Full=Collagenase-4; Short=xCol4; Flags: Precursor
 gi|2055321|gb|AAB53148.1| collagenase 4 precursor [Xenopus laevis]
          Length = 467

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           ++RA  VWS  + LTF  + ++ +DI I F   +H D  PFDG G ILAHAF PG+G GG
Sbjct: 134 IQRAFKVWSDVTPLTFTRIYNEVSDIEISFTAGDHKDNSPFDGSGGILAHAFQPGNGIGG 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDEDETW 203


>gi|403292606|ref|XP_003937326.1| PREDICTED: 72 kDa type IV collagenase [Saimiri boliviensis
           boliviensis]
          Length = 661

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/74 (51%), Positives = 46/74 (62%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF P  G 
Sbjct: 143 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFSPSPGI 202

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 203 GGDSHFDDDELWTL 216


>gi|187606698|emb|CAP19940.1| matrix metallopeptidase 13 [Sparus aurata]
          Length = 269

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 47/72 (65%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D + +AL VW+K + L F  +  D ADI+I F + +H D YPFDGP   LAHAF P  G 
Sbjct: 130 DSIEKALQVWAKVTPLRFTRIYSDTADIMISFGRLSHGDSYPFDGPDGTLAHAFAPAPGL 189

Query: 80  GGDAHFDIDEDW 91
           GGDAHFD DE +
Sbjct: 190 GGDAHFDEDETF 201


>gi|166831586|gb|ABY90111.1| matrix metalloproteinase 24 preproprotein (predicted) [Callithrix
           jacchus]
          Length = 564

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 104 RKAIRQAFDVWQKVTPLTFEEVPYHEVKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 163

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 164 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 193


>gi|13366100|dbj|BAB39390.1| matrix metalloproteinase 9 [Cyprinus carpio]
          Length = 674

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 46/74 (62%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + LTF  + D  ADI+I F +ENH D YPFDG   +L HA+ PG G 
Sbjct: 140 DAFARAFKVWSDVTPLTFTRLYDGTADIMISFGRENHGDPYPFDGKDGLLVHAYPPGEGI 199

Query: 80  GGDAHFDIDEDWMV 93
            GDAHFD DE W +
Sbjct: 200 QGDAHFDDDEYWTL 213


>gi|355784428|gb|EHH65279.1| Matrix metalloproteinase-9 [Macaca fascicularis]
          Length = 691

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 50/119 (42%), Positives = 63/119 (52%), Gaps = 9/119 (7%)

Query: 9   RVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+++Y     R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG
Sbjct: 122 RIQNYSEDLPRAVIEDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDG 181

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
              +LAHAF PG G  GDAHFD DE W     V+  ++  NAD G +       EGR +
Sbjct: 182 KDGLLAHAFPPGPGIQGDAHFDDDELWSLGKGVVVPTKFGNAD-GAACHFPFTFEGRSY 239


>gi|358415166|ref|XP_616761.5| PREDICTED: matrix metalloproteinase-24 [Bos taurus]
 gi|296481308|tpg|DAA23423.1| TPA: matrix metallopeptidase 24 (membrane-inserted) [Bos taurus]
          Length = 596

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 136 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 195

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 196 AYFPGPGIGGDTHFDSDEPWTL 217


>gi|431894330|gb|ELK04130.1| Matrix metalloproteinase-24 [Pteropus alecto]
          Length = 573

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 113 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 172

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 173 AYFPGPGIGGDTHFDSDEPWTL 194


>gi|281346053|gb|EFB21637.1| hypothetical protein PANDA_004527 [Ailuropoda melanoleuca]
          Length = 564

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 104 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 163

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 164 AYFPGPGIGGDTHFDSDEPWTL 185


>gi|148230386|ref|NP_001088423.1| matrix metalloproteinase-18 precursor [Xenopus laevis]
 gi|125858527|gb|AAI29520.1| Mmp18 protein [Xenopus laevis]
          Length = 467

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           ++RA  VWS  + LTF  + ++ +DI I F   +H D  PFDG G ILAHAF PG+G GG
Sbjct: 134 IQRAFKVWSDVTPLTFTRIYNEVSDIEISFTAGDHKDNSPFDGSGGILAHAFQPGNGIGG 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDEDETW 203


>gi|440902198|gb|ELR53014.1| Matrix metalloproteinase-24, partial [Bos grunniens mutus]
          Length = 564

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 104 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 163

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 164 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 193


>gi|6981214|ref|NP_036996.1| matrilysin precursor [Rattus norvegicus]
 gi|1705982|sp|P50280.1|MMP7_RAT RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
           Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
           Full=Pump-1 protease; AltName: Full=Uterine
           metalloproteinase; Flags: Precursor
 gi|402493|gb|AAA99432.1| matrilysin [Rattus norvegicus]
 gi|40555747|gb|AAH64657.1| Matrix metallopeptidase 7 [Rattus norvegicus]
 gi|149020720|gb|EDL78525.1| matrix metallopeptidase 7 [Rattus norvegicus]
          Length = 267

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           ++RAL +WS    L F+ V+   ADI+I F + +H D +PFDGPG  L HAF PG G GG
Sbjct: 132 VKRALRMWSMQIPLNFKRVSWGTADIIIGFARGDHGDNFPFDGPGNTLGHAFAPGPGLGG 191

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 192 DAHFDKDEYW 201


>gi|71051388|gb|AAH99337.1| Mmp18 protein [Xenopus laevis]
          Length = 477

 Score = 82.4 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           ++RA  VWS  + LTF  + ++ +DI I F   +H D  PFDG G ILAHAF PG+G GG
Sbjct: 144 IQRAFKVWSDVTPLTFTRIYNEVSDIEISFTAGDHKDNSPFDGSGGILAHAFQPGNGIGG 203

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 204 DAHFDEDETW 213


>gi|29126959|gb|AAH47614.1| MMP24 protein, partial [Homo sapiens]
          Length = 626

 Score = 82.4 bits (202), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 166 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 225

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 226 AYFPGPGIGGDTHFDSDEPWTL 247


>gi|13929064|ref|NP_113945.1| matrix metalloproteinase-24 precursor [Rattus norvegicus]
 gi|20138812|sp|Q99PW6.1|MMP24_RAT RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
           Full=Membrane-type matrix metalloproteinase 5;
           Short=MT-MMP 5; Short=MTMMP5; AltName:
           Full=Membrane-type-5 matrix metalloproteinase;
           Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
           Full=Processed matrix metalloproteinase-24; Flags:
           Precursor
 gi|12862768|dbj|BAB32589.1| membrane-type matrix metalloproteinase 5 [Rattus norvegicus]
          Length = 618

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 158 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 217

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 218 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 247


>gi|426242001|ref|XP_004014867.1| PREDICTED: matrix metalloproteinase-24 [Ovis aries]
          Length = 575

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 113 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 172

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 173 AYFPGPGIGGDTHFDSDEPWTL 194


>gi|115495469|ref|NP_034938.3| matrix metalloproteinase-24 precursor [Mus musculus]
 gi|341940958|sp|Q9R0S2.2|MMP24_MOUSE RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
           Full=Matrix metalloproteinase-21; Short=MMP-21; AltName:
           Full=Membrane-type matrix metalloproteinase 5;
           Short=MT-MMP 5; Short=MTMMP5; AltName:
           Full=Membrane-type-5 matrix metalloproteinase;
           Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
           Full=Processed matrix metalloproteinase-24; Flags:
           Precursor
 gi|162317834|gb|AAI56392.1| Matrix metallopeptidase 24 [synthetic construct]
          Length = 618

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 158 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 217

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +   +   N
Sbjct: 218 AYFPGPGIGGDTHFDSDEPWTLGNANHDGN 247


>gi|410953992|ref|XP_003983651.1| PREDICTED: matrix metalloproteinase-24 [Felis catus]
          Length = 631

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW K + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 171 RKAIRQAFDVWQKVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 230

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 231 AYFPGPGIGGDTHFDSDEPWTL 252


>gi|157837185|pdb|966C|A Chain A, Crystal Structure Of Fibroblast Collagenase-1 Complexed To
           A Diphenyl-Ether Sulphone Based Hydroxamic Acid
          Length = 157

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 67/118 (56%), Gaps = 8/118 (6%)

Query: 4   KHHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDG 59
            H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D 
Sbjct: 5   THLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDN 64

Query: 60  YPFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANA 113
            PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++
Sbjct: 65  SPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHS 122


>gi|162329592|ref|NP_001104772.1| matrix metalloproteinase-9 precursor [Equus caballus]
 gi|157930939|gb|ABW04638.1| MMP9 [Equus caballus]
          Length = 714

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/77 (53%), Positives = 48/77 (62%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VWS+ + LTF  VN  +ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDVIDDAFARAFAVWSEVTPLTFTRVNGPQADIVIQFGVREHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD +E W
Sbjct: 194 PGPGIQGDAHFDDEELW 210


>gi|54261660|gb|AAH84654.1| Mmp18 protein [Xenopus laevis]
          Length = 466

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           ++RA  VWS  + LTF  + ++ +DI I F   +H D  PFDG G ILAHAF PG+G GG
Sbjct: 133 IQRAFKVWSDVTPLTFTRIYNEVSDIEISFTAGDHKDNSPFDGSGGILAHAFQPGNGIGG 192

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 193 DAHFDEDETW 202


>gi|426245552|ref|XP_004016574.1| PREDICTED: interstitial collagenase [Ovis aries]
          Length = 488

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 46/115 (40%), Positives = 67/115 (58%), Gaps = 8/115 (6%)

Query: 9   RVRHY----DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  PFDG
Sbjct: 114 RIENYTPDLSRADVDQAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDG 173

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW----MVLGVSRSANADEGKSLELANADE 115
           PG  LAHAF PG+  GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 174 PGGNLAHAFQPGANIGGDAHFDDDERWTNDFQNYNLYRVAAHEFGHSLGLSHSTD 228


>gi|296216049|ref|XP_002754397.1| PREDICTED: stromelysin-1 [Callithrix jacchus]
          Length = 477

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  AD++I F    H D YPFDGPG++LAHA+ PG G  G
Sbjct: 134 IEKALKVWEEVTPLTFSRLYEGEADVMISFAVREHGDFYPFDGPGRVLAHAYAPGPGING 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDDDEQW 203


>gi|351709968|gb|EHB12887.1| Stromelysin-1 [Heterocephalus glaber]
          Length = 471

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+  Y +   RDE    + +AL VW + + LTF  +++  ADI+I F    H D  
Sbjct: 113 HLTYRIVSYTQDLPRDEVDFAIEKALKVWEEVTPLTFSRIHEGEADIMISFVFREHGDFI 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG +LAHA+ PG G  GDAHFD DE W
Sbjct: 173 PFDGPGSVLAHAYAPGPGINGDAHFDDDELW 203


>gi|261490798|ref|NP_001159780.1| stromelysin-1 precursor [Sus scrofa]
 gi|199652472|gb|ACH91677.1| matrix metallopeptidase 10 [Sus scrofa]
 gi|199652494|gb|ACH91678.1| matrix metallopeptidase 10 [Sus scrofa]
          Length = 477

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/77 (46%), Positives = 50/77 (64%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +   + +AL +W + + LTF ++++  ADI+I F    H D  PFDGPGK+LAHA+ 
Sbjct: 127 RSVIDSTIEKALKIWEEVTPLTFSKISEGEADIMITFAVREHGDFSPFDGPGKVLAHAYA 186

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  G+AHFD DE W
Sbjct: 187 PGPGIYGEAHFDDDEQW 203


>gi|47205892|emb|CAF91519.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 461

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 44/106 (41%), Positives = 58/106 (54%), Gaps = 12/106 (11%)

Query: 17  RLRDELRRALDVWSKHSKLTFREV-------NDDRADILIYFEKENHWDGYPFDGPGKIL 69
           R  D +R+ALD+W + + LTF+E+           ADI++ F    H D   FDGPG  L
Sbjct: 143 RTLDTIRKALDMWQRVTPLTFKELPAVPSSNQSALADIMLLFASGFHGDMSLFDGPGGSL 202

Query: 70  AHAFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           AHAF+PG G GGD HFD DE W +      + ++EG  L L    E
Sbjct: 203 AHAFYPGPGMGGDTHFDADEHWTL-----DSQSEEGIDLFLVAVHE 243


>gi|347447629|pdb|3SHI|A Chain A, Crystal Structure Of Human Mmp1 Catalytic Domain At 2.2 A
           Resolution
 gi|347447630|pdb|3SHI|G Chain G, Crystal Structure Of Human Mmp1 Catalytic Domain At 2.2 A
           Resolution
 gi|347447631|pdb|3SHI|M Chain M, Crystal Structure Of Human Mmp1 Catalytic Domain At 2.2 A
           Resolution
          Length = 156

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 67/118 (56%), Gaps = 8/118 (6%)

Query: 4   KHHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDG 59
            H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D 
Sbjct: 7   THLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDN 66

Query: 60  YPFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANA 113
            PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++
Sbjct: 67  SPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHS 124


>gi|157830597|pdb|1CGE|A Chain A, Crystal Structures Of Recombinant 19-Kda Human Fibroblast
           Collagenase Complexed To Itself
          Length = 168

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 4/96 (4%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A  +WS  + LTF +V++ +ADI+I F + +H D  PFDGPG  LAHAF PG G GG
Sbjct: 33  IEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGG 92

Query: 82  DAHFDIDEDWM----VLGVSRSANADEGKSLELANA 113
           DAHFD DE W        + R A  + G SL L+++
Sbjct: 93  DAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHS 128


>gi|332208030|ref|XP_003253099.1| PREDICTED: stromelysin-1 [Nomascus leucogenys]
          Length = 477

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 134 IEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDDDEQW 203


>gi|297690071|ref|XP_002822450.1| PREDICTED: stromelysin-1 [Pongo abelii]
          Length = 477

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 134 IEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDDDEQW 203


>gi|5420369|emb|CAB46656.1| matrix metalloproteinase-2 [Equus caballus]
          Length = 385

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 34  DAFARAFRVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 93

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 94  GGDSHFDDDELWTL 107


>gi|348574125|ref|XP_003472841.1| PREDICTED: neutrophil collagenase-like [Cavia porcellus]
          Length = 468

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/72 (54%), Positives = 44/72 (61%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A  VWS  S LTF    +  ADI I F   +H D  PFDGP  ILAHAF PG G GG
Sbjct: 136 IEKAFQVWSGASPLTFTRTTEKEADINIGFFHRDHGDNSPFDGPNGILAHAFQPGQGIGG 195

Query: 82  DAHFDIDEDWMV 93
           DAHFD +E W V
Sbjct: 196 DAHFDAEEIWTV 207


>gi|62897631|dbj|BAD96755.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
          Length = 469

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTD 231


>gi|30583961|gb|AAP36229.1| Homo sapiens matrix metalloproteinase 1 (interstitial collagenase)
           [synthetic construct]
 gi|54697160|gb|AAV38952.1| matrix metalloproteinase 1 (interstitial collagenase) [synthetic
           construct]
 gi|60654101|gb|AAX29743.1| matrix metalloproteinase 1 [synthetic construct]
 gi|60654103|gb|AAX29744.1| matrix metalloproteinase 1 [synthetic construct]
 gi|60830074|gb|AAX36910.1| matrix metalloproteinase 1 [synthetic construct]
 gi|61368096|gb|AAX43102.1| matrix metalloproteinase 1 [synthetic construct]
          Length = 470

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTD 231


>gi|297690067|ref|XP_002822447.1| PREDICTED: interstitial collagenase isoform 2 [Pongo abelii]
          Length = 403

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 47  HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 106

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 107 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHELGHSLGLSHSTD 165


>gi|426370256|ref|XP_004052084.1| PREDICTED: interstitial collagenase isoform 2 [Gorilla gorilla
           gorilla]
          Length = 403

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 47  HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 106

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 107 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLYRVAAHELGHSLGLSHSTD 165


>gi|54697154|gb|AAV38949.1| matrix metalloproteinase 1 (interstitial collagenase) [Homo
           sapiens]
 gi|61357929|gb|AAX41472.1| matrix metalloproteinase 1 [synthetic construct]
          Length = 469

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTD 231


>gi|158258755|dbj|BAF85348.1| unnamed protein product [Homo sapiens]
          Length = 467

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 8/115 (6%)

Query: 9   RVRHYDRGRLRDELRRAL----DVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+    ++WS  S L F  ++   ADI I F + +H D  PFDG
Sbjct: 116 RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 175

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           P  ILAHAF PG G GGDAHFD +E W     + +    A  + G SL LA++ +
Sbjct: 176 PNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAHEFGHSLGLAHSSD 230


>gi|62898123|dbj|BAD97001.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
          Length = 469

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTD 231


>gi|61368093|gb|AAX43101.1| matrix metalloproteinase 1 [synthetic construct]
          Length = 470

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTD 231


>gi|4505215|ref|NP_002412.1| interstitial collagenase isoform 1 preproprotein [Homo sapiens]
 gi|116852|sp|P03956.3|MMP1_HUMAN RecName: Full=Interstitial collagenase; AltName: Full=Fibroblast
           collagenase; AltName: Full=Matrix metalloproteinase-1;
           Short=MMP-1; Contains: RecName: Full=22 kDa interstitial
           collagenase; Contains: RecName: Full=27 kDa interstitial
           collagenase; Flags: Precursor
 gi|30126|emb|CAA38691.1| type I interstitial collagenase [Homo sapiens]
 gi|1688258|gb|AAB36941.1| collagenase [Homo sapiens]
 gi|15530201|gb|AAH13875.1| Matrix metallopeptidase 1 (interstitial collagenase) [Homo sapiens]
 gi|30582587|gb|AAP35520.1| matrix metalloproteinase 1 (interstitial collagenase) [Homo
           sapiens]
 gi|54112080|gb|AAV28732.1| matrix metalloproteinase 1 (interstitial collagenase) [Homo
           sapiens]
 gi|60818387|gb|AAX36462.1| matrix metalloproteinase 1 [synthetic construct]
 gi|61362913|gb|AAX42300.1| matrix metalloproteinase 1 [synthetic construct]
 gi|61362918|gb|AAX42301.1| matrix metalloproteinase 1 [synthetic construct]
 gi|119587435|gb|EAW67031.1| matrix metallopeptidase 1 (interstitial collagenase) [Homo sapiens]
 gi|123979652|gb|ABM81655.1| matrix metallopeptidase 1 (interstitial collagenase) [synthetic
           construct]
 gi|123994457|gb|ABM84830.1| matrix metallopeptidase 1 (interstitial collagenase) [synthetic
           construct]
 gi|208965212|dbj|BAG72620.1| matrix metallopeptidase 1 [synthetic construct]
          Length = 469

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTD 231


>gi|157833825|pdb|1SLM|A Chain A, Crystal Structure Of Fibroblast Stromelysin-1: The
           C-Truncated Human Proenzyme
          Length = 255

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 117 VEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 176

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 177 DAHFDDDEQW 186


>gi|194382548|dbj|BAG64444.1| unnamed protein product [Homo sapiens]
          Length = 426

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 8/115 (6%)

Query: 9   RVRHYDRGRLRDELRRAL----DVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+    ++WS  S L F  ++   ADI I F + +H D  PFDG
Sbjct: 93  RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 152

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           P  ILAHAF PG G GGDAHFD +E W     + +    A  + G SL LA++ +
Sbjct: 153 PNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAHEFGHSLGLAHSSD 207


>gi|296196996|ref|XP_002746081.1| PREDICTED: interstitial collagenase isoform 1 [Callithrix jacchus]
          Length = 471

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V   +ADI+I F + +H D  
Sbjct: 115 HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVPKGQADIMISFVRGDHRDNS 174

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 175 PFDGPGGNLAHAFQPGPGIGGDAHFDEDEMWTNNFREYNLYRVAAHELGHSLGLSHSTD 233


>gi|180665|gb|AAA35699.1| skin collagenase precursor [Homo sapiens]
          Length = 469

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 4/98 (4%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A  +WS  + LTF +V++ +ADI+I F + +H D  PFDGPG  LAHAF PG G GG
Sbjct: 134 IEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGG 193

Query: 82  DAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           DAHFD DE W        + R A  + G SL L+++ +
Sbjct: 194 DAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTD 231


>gi|119587431|gb|EAW67027.1| matrix metallopeptidase 8 (neutrophil collagenase) [Homo sapiens]
          Length = 467

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 8/115 (6%)

Query: 9   RVRHYDRGRLRDELRRAL----DVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+    ++WS  S L F  ++   ADI I F + +H D  PFDG
Sbjct: 116 RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 175

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           P  ILAHAF PG G GGDAHFD +E W     + +    A  + G SL LA++ +
Sbjct: 176 PNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAHEFGHSLGLAHSSD 230


>gi|71648770|gb|AAZ38714.1| matrix metalloproteinase 8 (neutrophil collagenase) [Homo sapiens]
          Length = 467

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 8/115 (6%)

Query: 9   RVRHYDRGRLRDELRRAL----DVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+    ++WS  S L F  ++   ADI I F + +H D  PFDG
Sbjct: 116 RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 175

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           P  ILAHAF PG G GGDAHFD +E W     + +    A  + G SL LA++ +
Sbjct: 176 PNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAHEFGHSLGLAHSSD 230


>gi|4505221|ref|NP_002415.1| neutrophil collagenase preproprotein [Homo sapiens]
 gi|116862|sp|P22894.1|MMP8_HUMAN RecName: Full=Neutrophil collagenase; AltName: Full=Matrix
           metalloproteinase-8; Short=MMP-8; AltName: Full=PMNL
           collagenase; Short=PMNL-CL; Flags: Precursor
 gi|180618|gb|AAA88021.1| neutrophil collagenase [Homo sapiens]
 gi|50960672|gb|AAH74989.1| Matrix metallopeptidase 8 (neutrophil collagenase) [Homo sapiens]
 gi|50960779|gb|AAH74988.1| Matrix metallopeptidase 8 (neutrophil collagenase) [Homo sapiens]
          Length = 467

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 8/115 (6%)

Query: 9   RVRHYDRGRLRDELRRAL----DVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+    ++WS  S L F  ++   ADI I F + +H D  PFDG
Sbjct: 116 RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 175

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           P  ILAHAF PG G GGDAHFD +E W     + +    A  + G SL LA++ +
Sbjct: 176 PNGILAHAFQPGQGIGGDAHFDAEETWTNTSANYNLFLVAAHEFGHSLGLAHSSD 230


>gi|115668714|ref|XP_786545.2| PREDICTED: matrix metalloproteinase-14-like [Strongylocentrotus
           purpuratus]
          Length = 526

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 52/81 (64%), Gaps = 4/81 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +R+ + RAL  WS  S+LTFREV    AD+L+ F   +H DG PFDG GK+LAHAFF
Sbjct: 125 RSSVREIIARALKHWSDASQLTFREVQSGDADLLMKFTSRDHGDGNPFDGSGKVLAHAFF 184

Query: 75  PGSGR----GGDAHFDIDEDW 91
           P S R     GDAHFD  E +
Sbjct: 185 PTSERRYSIAGDAHFDEAETY 205


>gi|1000001|pdb|1CGF|A Chain A, Crystal Structures Of Recombinant 19-Kda Human Fibroblast
           Collagenase Complexed To Itself
 gi|1000002|pdb|1CGF|B Chain B, Crystal Structures Of Recombinant 19-Kda Human Fibroblast
           Collagenase Complexed To Itself
          Length = 162

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 4/96 (4%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A  +WS  + LTF +V++ +ADI+I F + +H D  PFDGPG  LAHAF PG G GG
Sbjct: 33  IEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGG 92

Query: 82  DAHFDIDEDWM----VLGVSRSANADEGKSLELANA 113
           DAHFD DE W        + R A  + G SL L+++
Sbjct: 93  DAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHS 128


>gi|326677672|ref|XP_698601.5| PREDICTED: matrix metalloproteinase-17 [Danio rerio]
          Length = 588

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 1/90 (1%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           ++  PK      R  +R  +  AL VWS  + L F EV  + ADI I F K +H DGYPF
Sbjct: 129 VRTFPKESTSLGRDTVRALMYYALKVWSDIAPLNFHEVAGNEADIQIDFTKADHNDGYPF 188

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 189 DGPGGTVAHAFFPGERFTAGDTHFDDDEAW 218


>gi|332837587|ref|XP_003313323.1| PREDICTED: neutrophil collagenase [Pan troglodytes]
          Length = 467

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 8/115 (6%)

Query: 9   RVRHYDRGRLRDELRRAL----DVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+    ++WS  S L F  ++   ADI I F + +H D  PFDG
Sbjct: 116 RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 175

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           P  ILAHAF PG G GGDAHFD +E W     + +    A  + G SL LA++ +
Sbjct: 176 PNGILAHAFQPGQGIGGDAHFDAEETWTDTSANYNLFLVAAHEFGHSLGLAHSSD 230


>gi|395520440|ref|XP_003764338.1| PREDICTED: macrophage metalloelastase [Sarcophilus harrisii]
          Length = 466

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 4/89 (4%)

Query: 9   RVRHY----DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+++Y     +  +   +++A +VWS  + LTF+ +    ADI+I F   +H D YPFDG
Sbjct: 110 RIKNYTPDISKAEVDYAIKKAFEVWSNVTPLTFKRIYAGEADIMISFASGDHGDFYPFDG 169

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
               LAHA+ PG G GGDAHFD DE W V
Sbjct: 170 SHGTLAHAYAPGPGIGGDAHFDEDEGWTV 198


>gi|225543094|ref|NP_001139410.1| interstitial collagenase isoform 2 [Homo sapiens]
 gi|194387426|dbj|BAG60077.1| unnamed protein product [Homo sapiens]
          Length = 403

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 47  HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 106

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 107 PFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTD 165


>gi|296480357|tpg|DAA22472.1| TPA: matrix metalloproteinase 7 [Bos taurus]
          Length = 267

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 5/99 (5%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A  +WS+   LTF+ +    ADI+I F +  H D YPFDGPG  LAHAF PG G GG
Sbjct: 129 VAKAFKIWSEAIPLTFKRLRWGTADIMIGFARRAHGDPYPFDGPGATLAHAFAPGPGLGG 188

Query: 82  DAHFDIDEDW---MVLGVS--RSANADEGKSLELANADE 115
           DAHFD DE W   + +GV+    A  + G SL L+++ +
Sbjct: 189 DAHFDEDERWTDGIGIGVNFLYVATHELGHSLGLSHSSD 227


>gi|4505217|ref|NP_002413.1| stromelysin-1 preproprotein [Homo sapiens]
 gi|116857|sp|P08254.2|MMP3_HUMAN RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
           metalloproteinase-3; Short=MMP-3; AltName:
           Full=Transin-1; Flags: Precursor
 gi|15294140|gb|AAK95247.1|AF405705_1 matrix metalloproteinase 3 (stromelysin 1, progelatinase) [Homo
           sapiens]
 gi|36633|emb|CAA28859.1| preprostromelysin [Homo sapiens]
 gi|50960572|gb|AAH74815.1| Matrix metalloproteinase 3, preproprotein [Homo sapiens]
 gi|77567646|gb|AAI07492.1| Matrix metalloproteinase 3, preproprotein [Homo sapiens]
 gi|119587436|gb|EAW67032.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
           sapiens]
 gi|189053854|dbj|BAG36115.1| unnamed protein product [Homo sapiens]
          Length = 477

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 134 VEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDDDEQW 203


>gi|27807447|ref|NP_777170.1| 72 kDa type IV collagenase precursor [Bos taurus]
 gi|75049982|sp|Q9GLE5.1|MMP2_BOVIN RecName: Full=72 kDa type IV collagenase; AltName: Full=72 kDa
           gelatinase; AltName: Full=Matrix metalloproteinase-2;
           Short=MMP-2; Contains: RecName: Full=PEX; Flags:
           Precursor
 gi|11055603|gb|AAG28169.1|AF290428_1 matrix metalloprotease 2 [Bos taurus]
          Length = 661

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 45/70 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 143 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGV 202

Query: 80  GGDAHFDIDE 89
           GGD+HFD DE
Sbjct: 203 GGDSHFDDDE 212


>gi|315585124|gb|ADU34084.1| matrix metalloproteinase 2 [Ctenopharyngodon idella]
          Length = 657

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 48/80 (60%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  + D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 136 DEETIDDAFYRAFKVWSDVTPLNFTRIMDGEADIMINFGRNEHGDGYPFDGKDGLLAHAF 195

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG G GGD+HFD DE W +
Sbjct: 196 APGPGIGGDSHFDDDELWTL 215


>gi|449269765|gb|EMC80516.1| Interstitial collagenase, partial [Columba livia]
          Length = 433

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           + +R+AL VWS  + LTFR+V D  ADI+I F   +H D  PFDGP   LAHAF PG G 
Sbjct: 99  EAIRKALSVWSNVTPLTFRKVEDKEADIVISFAYRDHRDNSPFDGPNGQLAHAFQPGEGI 158

Query: 80  GGDAHFDIDEDW 91
           GGD H D +E W
Sbjct: 159 GGDVHLDEEEAW 170


>gi|410340133|gb|JAA39013.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Pan
           troglodytes]
          Length = 477

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 134 VEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDDDEQW 203


>gi|114640107|ref|XP_508723.2| PREDICTED: stromelysin-1 isoform 4 [Pan troglodytes]
 gi|397516414|ref|XP_003828425.1| PREDICTED: stromelysin-1 [Pan paniscus]
 gi|410213336|gb|JAA03887.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Pan
           troglodytes]
 gi|410340129|gb|JAA39011.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Pan
           troglodytes]
          Length = 477

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 134 VEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDDDEQW 203


>gi|410340137|gb|JAA39015.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Pan
           troglodytes]
          Length = 476

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 133 VEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 192

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 193 DAHFDDDEQW 202


>gi|188619|gb|AAA36321.1| matrix metalloproteinase-3 [Homo sapiens]
 gi|260509|gb|AAA00036.1| prostromelysin=matrix metalloproteinase [human, Peptide, 477 aa]
 gi|1688259|gb|AAB36942.1| stromelysin [Homo sapiens]
 gi|46854935|gb|AAH69676.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
           sapiens]
 gi|46854939|gb|AAH69716.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
           sapiens]
 gi|50960755|gb|AAH74869.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
           sapiens]
 gi|62898127|dbj|BAD97003.1| matrix metalloproteinase 3 preproprotein variant [Homo sapiens]
 gi|62898143|dbj|BAD97011.1| matrix metalloproteinase 3 preproprotein variant [Homo sapiens]
 gi|76780106|gb|AAI05955.1| Matrix metalloproteinase 3, preproprotein [Homo sapiens]
 gi|77567902|gb|AAI07491.1| Matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Homo
           sapiens]
 gi|312150808|gb|ADQ31916.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [synthetic
           construct]
          Length = 477

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 134 VEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDDDEQW 203


>gi|410340131|gb|JAA39012.1| matrix metallopeptidase 3 (stromelysin 1, progelatinase) [Pan
           troglodytes]
          Length = 477

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 134 VEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDDDEQW 203


>gi|440902967|gb|ELR53691.1| Matrilysin [Bos grunniens mutus]
          Length = 267

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 5/106 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +   + +A  +WS+   LTF+ +    ADI+I F +  H D YPFDGPG  LAHAF 
Sbjct: 122 RITVNQLVAKAFKIWSEAIPLTFKRLRWGTADIMIGFARRAHGDPYPFDGPGATLAHAFA 181

Query: 75  PGSGRGGDAHFDIDEDW---MVLGVS--RSANADEGKSLELANADE 115
           PG G GGDAHFD DE W   + +GV+    A  + G SL L+++ +
Sbjct: 182 PGPGLGGDAHFDEDERWTDGIGIGVNFLYVATHELGHSLGLSHSSD 227


>gi|115496540|ref|NP_001068598.1| matrilysin precursor [Bos taurus]
 gi|109939761|gb|AAI18076.1| Matrix metallopeptidase 7 (matrilysin, uterine) [Bos taurus]
          Length = 267

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 5/99 (5%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A  +WS+   LTF+ +    ADI+I F +  H D YPFDGPG  LAHAF PG G GG
Sbjct: 129 VAKAFKIWSEAIPLTFKRLRWGTADIMIGFARRAHGDPYPFDGPGATLAHAFAPGPGLGG 188

Query: 82  DAHFDIDEDW---MVLGVS--RSANADEGKSLELANADE 115
           DAHFD DE W   + +GV+    A  + G SL L+++ +
Sbjct: 189 DAHFDEDERWTDGIGIGVNFLYVATHELGHSLGLSHSSD 227


>gi|348504208|ref|XP_003439654.1| PREDICTED: stromelysin-3-like [Oreochromis niloticus]
          Length = 485

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 48/77 (62%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R   + A  VW   + L FREV  + ADI+I F +  H D  PFDGPG ILAHA+FP 
Sbjct: 136 KVRSVFQEAFGVWGAVTPLRFREVTSENADIIIDFNRYWHGDSLPFDGPGGILAHAYFPQ 195

Query: 77  SGRGGDAHFDIDEDWMV 93
           + R G+ HFD DE W V
Sbjct: 196 TQREGEVHFDYDEHWTV 212


>gi|410930806|ref|XP_003978789.1| PREDICTED: matrix metalloproteinase-17-like, partial [Takifugu
           rubripes]
          Length = 324

 Score = 81.6 bits (200), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 56/102 (54%), Gaps = 5/102 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           ++  PK      R  +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 1   VRTFPKDSALLGRDTVRALMHYALKVWSDIAPLNFHEVAGSDADIQIDFTKADHEDGYPF 60

Query: 63  DGPGKILAHAFFPGSG-RGGDAHFDIDEDWMVLGVSRSANAD 103
           DGPG  +AHAFFPG     GD HFD DE W      RS +AD
Sbjct: 61  DGPGGTVAHAFFPGEKFSAGDTHFDDDEAWTF----RSPDAD 98


>gi|62897633|dbj|BAD96756.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
          Length = 338

 Score = 81.6 bits (200), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 4/98 (4%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A  +WS  + LTF +V++ +ADI+I F + +H D  PFDGPG  LAHAF PG G GG
Sbjct: 3   IEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGG 62

Query: 82  DAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           DAHFD DE W        + R A  + G SL L+++ +
Sbjct: 63  DAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTD 100


>gi|302564017|ref|NP_001181006.1| matrix metalloproteinase-25 precursor [Macaca mulatta]
 gi|355566058|gb|EHH22487.1| hypothetical protein EGK_05765 [Macaca mulatta]
          Length = 483

 Score = 81.6 bits (200), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/72 (51%), Positives = 44/72 (61%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           ++ AL  WS    L+F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 142 VQMALQAWSSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGG 201

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 202 DTHFDNAEKWTM 213


>gi|111955033|ref|NP_034940.2| matrilysin precursor [Mus musculus]
 gi|74190529|dbj|BAE25921.1| unnamed protein product [Mus musculus]
 gi|111306729|gb|AAI20656.1| Matrix metallopeptidase 7 [Mus musculus]
 gi|111599927|gb|AAI19058.1| Matrix metallopeptidase 7 [Mus musculus]
          Length = 267

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++AL +WS    L F+ V+   ADI+I F + +H D +PFDGPG  L HAF PG G GG
Sbjct: 132 VKKALRMWSMQIPLNFKRVSWGTADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGG 191

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 192 DAHFDKDEYW 201


>gi|291383991|ref|XP_002708467.1| PREDICTED: matrix metalloproteinase 8 [Oryctolagus cuniculus]
          Length = 408

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 49/98 (50%), Positives = 57/98 (58%), Gaps = 8/98 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + RA  VWS  S LTF  +    ADI I F + +H D  PFDGP  ILAHAF PG G GG
Sbjct: 76  IERAFGVWSAVSPLTFTRIVQGEADINIAFAQGDHGDISPFDGPNGILAHAFQPGQGIGG 135

Query: 82  DAHFDIDEDWMVLGVSRSAN-----ADE-GKSLELANA 113
           DAHFD +E W     SR+ N     A E G SL LA++
Sbjct: 136 DAHFDAEETWT--KTSRNYNLFIVAAHEFGHSLGLAHS 171


>gi|354467472|ref|XP_003496193.1| PREDICTED: neutrophil collagenase-like [Cricetulus griseus]
          Length = 600

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/77 (49%), Positives = 46/77 (59%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           +  ++  + +A  VWS  S LTF E++   ADI I F    H D  PFDGP  ILAHAF 
Sbjct: 128 KAAVKTAIEKAFQVWSVASPLTFTELSKGEADINIAFVPREHGDNSPFDGPNGILAHAFQ 187

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G GGD HFD +E W
Sbjct: 188 PGQGIGGDTHFDSEETW 204


>gi|444724335|gb|ELW64942.1| Matrix metalloproteinase-20 [Tupaia chinensis]
          Length = 583

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/69 (55%), Positives = 42/69 (60%)

Query: 25  ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
           AL  WS    L+F  VN   ADI+I FE  +H D YPFDGP   LAHAF PG G GGD H
Sbjct: 145 ALQAWSSAVPLSFVRVNSGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTH 204

Query: 85  FDIDEDWMV 93
           FD  E W +
Sbjct: 205 FDNAEKWTM 213


>gi|351709972|gb|EHB12891.1| Collagenase 3 [Heterocephalus glaber]
          Length = 471

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++AL VWS  + L F  +++  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKALKVWSSVTPLNFTRLHEGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         N+ +G +L L  A E
Sbjct: 198 DAHFDDDEYW--------TNSSKGYNLFLVAAHE 223


>gi|50234983|gb|AAT70722.1| matrix metalloproteinase 20 (enamelysin) [Homo sapiens]
 gi|119587428|gb|EAW67024.1| matrix metallopeptidase 20 (enamelysin) [Homo sapiens]
          Length = 483

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/69 (53%), Positives = 42/69 (60%)

Query: 25  ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
           AL  WS    L+F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GGD H
Sbjct: 145 ALQAWSSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTH 204

Query: 85  FDIDEDWMV 93
           FD  E W +
Sbjct: 205 FDNAEKWTM 213


>gi|403262941|ref|XP_003923823.1| PREDICTED: matrilysin [Saimiri boliviensis boliviensis]
          Length = 270

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL++W K   L FR +    ADI+I F +  H D YPFDGPG  LAHAF PG G GG
Sbjct: 132 VSKALNMWGKEIPLRFRRLLWGTADIMIGFARGAHGDPYPFDGPGNTLAHAFAPGPGLGG 191

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 192 DAHFDEDERW 201


>gi|114640083|ref|XP_001153208.1| PREDICTED: matrix metalloproteinase-20 [Pan troglodytes]
          Length = 483

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/69 (53%), Positives = 42/69 (60%)

Query: 25  ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
           AL  WS    L+F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GGD H
Sbjct: 145 ALQAWSSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTH 204

Query: 85  FDIDEDWMV 93
           FD  E W +
Sbjct: 205 FDNAEKWTM 213


>gi|28949129|pdb|1QIA|A Chain A, Crystal Structure Of Stromelysin Catalytic Domain
 gi|28949130|pdb|1QIA|B Chain B, Crystal Structure Of Stromelysin Catalytic Domain
 gi|28949131|pdb|1QIA|C Chain C, Crystal Structure Of Stromelysin Catalytic Domain
 gi|28949132|pdb|1QIA|D Chain D, Crystal Structure Of Stromelysin Catalytic Domain
          Length = 162

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22 LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
          + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 29 VEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 88

Query: 82 DAHFDIDEDW 91
          DAHFD DE W
Sbjct: 89 DAHFDDDEQW 98


>gi|444726441|gb|ELW66975.1| Serine/threonine-protein kinase ULK1 [Tupaia chinensis]
          Length = 2910

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/89 (48%), Positives = 50/89 (56%), Gaps = 7/89 (7%)

Query: 10   VRHYDRGR------LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFD 63
            VR + RG       +R  +  AL VW   + L F EV    ADI I F   +H DGYPFD
Sbjct: 1020 VRTFPRGSGLGRDTVRALMHYALKVWGDITPLNFHEVAGSTADIQIDFSTADHNDGYPFD 1079

Query: 64   GPGKILAHAFFPGSGR-GGDAHFDIDEDW 91
            GPG  +AHAFFPG     GD HFD DE+W
Sbjct: 1080 GPGGTVAHAFFPGDHHTAGDTHFDDDEEW 1108


>gi|332208036|ref|XP_003253102.1| PREDICTED: macrophage metalloelastase [Nomascus leucogenys]
          Length = 470

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 4/87 (4%)

Query: 9   RVRHY----DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y    +R  + + +R+A  VWS  + L F ++    ADIL+ F +  H D + FDG
Sbjct: 117 RINNYTPDMNREDVDNTIRKAFQVWSNVTPLKFSKIKTGVADILVVFARGAHGDFHAFDG 176

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
            G ILAHAF PGSG GGDAHFD DE W
Sbjct: 177 KGGILAHAFGPGSGIGGDAHFDDDEFW 203


>gi|149716837|ref|XP_001498859.1| PREDICTED: matrilysin-like [Equus caballus]
          Length = 267

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 3/86 (3%)

Query: 6   HPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGP 65
           HP+ +      +L   + +AL +WS+   L F+ V+   ADI+I F +  H D YPFDGP
Sbjct: 116 HPRELSLVIVNQL---VAKALKMWSEEIPLHFKRVSWGTADIMIGFARGAHGDPYPFDGP 172

Query: 66  GKILAHAFFPGSGRGGDAHFDIDEDW 91
           G  LAHAF PG G GGDAHFD DE W
Sbjct: 173 GNTLAHAFSPGPGLGGDAHFDEDERW 198


>gi|126327144|ref|XP_001366886.1| PREDICTED: collagenase 3 [Monodelphis domestica]
          Length = 475

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 56/94 (59%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+AL VWS  + L F  +++  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 142 IRKALKVWSDVTPLNFTRLHNGTADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 201

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         N+ +G +L L  A E
Sbjct: 202 DAHFDDDEIW--------TNSAKGYNLFLVAAHE 227


>gi|1705981|sp|Q10738.1|MMP7_MOUSE RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
           Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
           Full=Pump-1 protease; AltName: Full=Uterine
           metalloproteinase; Flags: Precursor
 gi|548182|gb|AAA99984.1| matrilysin [Mus musculus]
 gi|148692994|gb|EDL24941.1| matrix metallopeptidase 7 [Mus musculus]
          Length = 264

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++AL +WS    L F+ V+   ADI+I F + +H D +PFDGPG  L HAF PG G GG
Sbjct: 129 VKKALRMWSMQIPLNFKRVSWGTADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGG 188

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 189 DAHFDKDEYW 198


>gi|157831330|pdb|1HFS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
          Fibroblast Stromelysin-1 Inhibited With The
          N-Carboxy-Alkyl Inhibitor L-764,004
          Length = 160

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 4/92 (4%)

Query: 4  KHHPKRVRHYDRGRLRDEL----RRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDG 59
           H   R+ +Y     +D +     +AL VW + + LTF  + +  ADI+I F    H D 
Sbjct: 8  THLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDF 67

Query: 60 YPFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
          YPFDGPG +LAHA+ PG G  GDAHFD DE W
Sbjct: 68 YPFDGPGNVLAHAYAPGPGINGDAHFDDDEQW 99


>gi|162329902|pdb|2JNP|A Chain A, Solution Structure Of Matrix Metalloproteinase 3 (Mmp-3)
          In The Presence Of N-Isobutyl-N-[4-
          Methoxyphenylsulfonyl]glycyl Hydroxamic Acid (Nngh)
 gi|168177030|pdb|2JT5|A Chain A, Solution Structure Of Matrix Metalloproteinase 3 (mmp-3)
          In The Presence Of
          N-hydroxy-2-[n-(2-hydroxyethyl)biphenyl-4- Sulfonamide]
          Hydroxamic Acid (mlc88)
 gi|168177031|pdb|2JT6|A Chain A, Solution Structure Of Matrix Metalloproteinase 3 (Mmp-3)
          In The Presence Of 3-4'-Cyanobyphenyl-4-Yloxy)-N-
          Hdydroxypropionamide (Mmp-3 Inhibitor Vii)
          Length = 161

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 4/92 (4%)

Query: 4  KHHPKRVRHYDRGRLRDEL----RRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDG 59
           H   R+ +Y     +D +     +AL VW + + LTF  + +  ADI+I F    H D 
Sbjct: 8  THLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDF 67

Query: 60 YPFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
          YPFDGPG +LAHA+ PG G  GDAHFD DE W
Sbjct: 68 YPFDGPGNVLAHAYAPGPGINGDAHFDDDEQW 99


>gi|28949133|pdb|1QIC|A Chain A, Crystal Structure Of Stromelysin Catalytic Domain
 gi|28949134|pdb|1QIC|B Chain B, Crystal Structure Of Stromelysin Catalytic Domain
 gi|28949135|pdb|1QIC|C Chain C, Crystal Structure Of Stromelysin Catalytic Domain
 gi|28949136|pdb|1QIC|D Chain D, Crystal Structure Of Stromelysin Catalytic Domain
          Length = 161

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 4/92 (4%)

Query: 4  KHHPKRVRHYDRGRLRDEL----RRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDG 59
           H   R+ +Y     +D +     +AL VW + + LTF  + +  ADI+I F    H D 
Sbjct: 7  THLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDF 66

Query: 60 YPFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
          YPFDGPG +LAHA+ PG G  GDAHFD DE W
Sbjct: 67 YPFDGPGNVLAHAYAPGPGINGDAHFDDDEQW 98


>gi|159163166|pdb|1UMS|A Chain A, Stromelysin-1 Catalytic Domain With Hydrophobic Inhibitor
           Bound, Ph 7.0, 32oc, 20 Mm Cacl2, 15% Acetonitrile; Nmr
           Ensemble Of 20 Structures
 gi|159163167|pdb|1UMT|A Chain A, Stromelysin-1 Catalytic Domain With Hydrophobic Inhibitor
           Bound, Ph 7.0, 32oc, 20 Mm Cacl2, 15% Acetonitrile; Nmr
           Average Of 20 Structures Minimized With Restraints
 gi|5639848|gb|AAD45887.1|AF156935_1 stromelysin catalytic domain [synthetic construct]
          Length = 174

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 35  VEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 94

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 95  DAHFDDDEQW 104


>gi|185134636|ref|NP_001117671.1| matrix metalloproteinase [Oncorhynchus mykiss]
 gi|11761266|dbj|BAB19131.1| matrix metalloproteinase [Oncorhynchus mykiss]
          Length = 475

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 7/102 (6%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           + + RAL VW+K S L F  +    ADI+I F   NH D YPFDGP   LAHAF PG+  
Sbjct: 133 NSIERALQVWAKVSPLRFTRIYRGTADIMISFGNRNHGDFYPFDGPEGTLAHAFSPGADI 192

Query: 80  GGDAHFDIDEDWMVLGVSRSAN-----ADE-GKSLELANADE 115
           GGDAHFD D+++     +R  N     A E G SL L+++++
Sbjct: 193 GGDAHFD-DDEYFTFSSTRGYNLFLVAAHEFGHSLGLSHSND 233


>gi|327271606|ref|XP_003220578.1| PREDICTED: matrix metalloproteinase-24-like [Anolis carolinensis]
          Length = 604

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 50/82 (60%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +R+A DVW + + LTF EV       DR  ADI+I+F    H D  PFDG G  LAH
Sbjct: 144 RKAIRQAFDVWQRVTPLTFEEVPYHEIKSDRKEADIMIFFASGFHGDSSPFDGEGGFLAH 203

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 204 AYFPGPGIGGDTHFDSDEPWTL 225


>gi|537929|gb|AAA99983.1| matrilysin [Mus musculus]
 gi|1098307|prf||2115376A matrilysin
          Length = 264

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++AL +WS    L F+ V+   ADI+I F + +H D +PFDGPG  L HAF PG G GG
Sbjct: 129 VKKALRMWSMQIPLNFKRVSWGTADIIIGFARRDHGDSFPFDGPGNTLGHAFAPGPGLGG 188

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 189 DAHFDKDEYW 198


>gi|74218603|dbj|BAE25191.1| unnamed protein product [Mus musculus]
          Length = 730

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 46/77 (59%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VW + + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDMIDDAFARAFAVWGEVAPLTFTRVYGPEADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG+G  GDAHFD DE W
Sbjct: 194 PGAGVQGDAHFDDDELW 210


>gi|47212180|emb|CAF95128.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 351

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 55/102 (53%), Gaps = 5/102 (4%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           ++  PK      R  +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 89  VRSFPKDSPSLGRDTVRALMHYALKVWSDIAPLDFHEVAGSDADIQIDFTKADHRDGYPF 148

Query: 63  DGPGKILAHAFFPGSG-RGGDAHFDIDEDWMVLGVSRSANAD 103
           DGPG  +AHAFFPG     GD HFD DE W      RS  AD
Sbjct: 149 DGPGGTVAHAFFPGEKFTAGDTHFDDDEAWTF----RSPEAD 186


>gi|5821823|pdb|1BIW|A Chain A, Design And Synthesis Of Conformationally-Constrained Mmp
           Inhibitors
 gi|5821824|pdb|1BIW|B Chain B, Design And Synthesis Of Conformationally-Constrained Mmp
           Inhibitors
 gi|5821875|pdb|1BQO|A Chain A, Discovery Of Potent, Achiral Matrix Metalloproteinase
           Inhibitors
 gi|5821876|pdb|1BQO|B Chain B, Discovery Of Potent, Achiral Matrix Metalloproteinase
           Inhibitors
 gi|6730091|pdb|1B3D|A Chain A, Stromelysin-1
 gi|6730092|pdb|1B3D|B Chain B, Stromelysin-1
 gi|7546439|pdb|1CQR|A Chain A, Crystal Structure Of The Stromelysin Catalytic Domain At
           2.0 A Resolution
 gi|7546440|pdb|1CQR|B Chain B, Crystal Structure Of The Stromelysin Catalytic Domain At
           2.0 A Resolution
 gi|9955066|pdb|1C3I|A Chain A, Human Stromelysin-1 Catalytic Domain Complexed With
           Ro-26-2812
 gi|9955067|pdb|1C3I|B Chain B, Human Stromelysin-1 Catalytic Domain Complexed With
           Ro-26-2812
 gi|11514292|pdb|1D8M|A Chain A, Crystal Structure Of Mmp3 Complexed With A Heterocycle-
           Based Inhibitor
 gi|11514293|pdb|1D8M|B Chain B, Crystal Structure Of Mmp3 Complexed With A Heterocycle-
           Based Inhibitor
 gi|11514340|pdb|1D7X|A Chain A, Crystal Structure Of Mmp3 Complexed With A Modified
           Proline Scaffold Based Inhibitor.
 gi|11514341|pdb|1D7X|B Chain B, Crystal Structure Of Mmp3 Complexed With A Modified
           Proline Scaffold Based Inhibitor.
 gi|11514343|pdb|1D8F|A Chain A, Crystal Structure Of Mmp3 Complexed With A Piperazine
           Based Inhibitor.
 gi|11514344|pdb|1D8F|B Chain B, Crystal Structure Of Mmp3 Complexed With A Piperazine
           Based Inhibitor.
 gi|11514709|pdb|1D5J|A Chain A, Crystal Structure Of Mmp3 Complexed With A Thiazepine
           Based Inhibitor.
 gi|11514710|pdb|1D5J|B Chain B, Crystal Structure Of Mmp3 Complexed With A Thiazepine
           Based Inhibitor.
 gi|16975078|pdb|1G49|A Chain A, A Carboxylic Acid Based Inhibitor In Complex With Mmp3
 gi|16975079|pdb|1G49|B Chain B, A Carboxylic Acid Based Inhibitor In Complex With Mmp3
 gi|16975364|pdb|1G05|A Chain A, Heterocycle-Based Mmp Inhibitor With P2'substituents
 gi|16975365|pdb|1G05|B Chain B, Heterocycle-Based Mmp Inhibitor With P2'substituents
 gi|18655790|pdb|1HY7|A Chain A, A Carboxylic Acid Based Inhibitor In Complex With Mmp3
 gi|18655791|pdb|1HY7|B Chain B, A Carboxylic Acid Based Inhibitor In Complex With Mmp3
 gi|159162122|pdb|1BM6|A Chain A, Solution Structure Of The Catalytic Domain Of Human
           Stromelysin-1 Complexed To A Potent Non-Peptidic
           Inhibitor, Nmr, 20 Structures
 gi|159164778|pdb|2SRT|A Chain A, Catalytic Domain Of Human Stromelysin-1 At Ph 5.5 And 40oc
           Complexed With Inhibitor
 gi|357380879|pdb|1SLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
           Fibroblast Stromelysin-1 Inhibited With The
           N-Carboxy-Alkyl Inhibitor L-702,842
 gi|451928624|pdb|4DPE|A Chain A, Structure Of Mmp3 Complexed With A Platinum-based
           Inhibitor.
 gi|451928625|pdb|4DPE|B Chain B, Structure Of Mmp3 Complexed With A Platinum-based
           Inhibitor.
 gi|453056257|pdb|4JA1|A Chain A, Structure Of Mmp3 Complexed With A Platinum-based
           Inhibitor
 gi|453056258|pdb|4JA1|B Chain B, Structure Of Mmp3 Complexed With A Platinum-based
           Inhibitor
          Length = 173

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 35  VEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 94

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 95  DAHFDDDEQW 104


>gi|431916541|gb|ELK16519.1| Interstitial collagenase [Pteropus alecto]
          Length = 470

 Score = 81.3 bits (199), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  S LTF +V + +ADI+I F + +H D  
Sbjct: 114 HLTYRIENYTPDLPRADVNYAIEKAFQLWSNVSPLTFTQVFEGQADIMISFVRGDHRDNS 173

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG  LAHAF PG G GGD HFD DE W
Sbjct: 174 PFDGPGGNLAHAFQPGPGIGGDVHFDEDEWW 204


>gi|157834101|pdb|1USN|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
           Fibroblast Stromelysin-1 Inhibited With Thiadiazole
           Inhibitor Pnu-142372
 gi|157836402|pdb|2USN|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
           Fibroblast Stromelysin-1 Inhibited With Thiadiazole
           Inhibitor Pnu-141803
          Length = 165

 Score = 81.3 bits (199), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 4/92 (4%)

Query: 4   KHHPKRVRHYDRGRLRDEL----RRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDG 59
            H   R+ +Y     +D +     +AL VW + + LTF  + +  ADI+I F    H D 
Sbjct: 13  THLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDF 72

Query: 60  YPFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           YPFDGPG +LAHA+ PG G  GDAHFD DE W
Sbjct: 73  YPFDGPGNVLAHAYAPGPGINGDAHFDDDEQW 104


>gi|6137649|pdb|1B8Y|A Chain A, X-Ray Structure Of Human Stromelysin Catalytic Domain
           Complexed With Non-Peptide Inhibitors: Implications For
           Inhibitor Selectivity
 gi|340707741|pdb|3OHL|A Chain A, Catalytic Domain Of Stromelysin-1 In Complex With
           N-Hydroxy-2-(4-
           Methoxy-N-(Pyridine-3-
           Ylmethyl)phenylsulfonamido)acetamide
          Length = 167

 Score = 81.3 bits (199), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 53/92 (57%), Gaps = 4/92 (4%)

Query: 4   KHHPKRVRHYDRGRLRDEL----RRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDG 59
            H   R+ +Y     +D +     +AL VW + + LTF  + +  ADI+I F    H D 
Sbjct: 13  THLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDF 72

Query: 60  YPFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           YPFDGPG +LAHA+ PG G  GDAHFD DE W
Sbjct: 73  YPFDGPGNVLAHAYAPGPGINGDAHFDDDEQW 104


>gi|344287821|ref|XP_003415650.1| PREDICTED: matrix metalloproteinase-20-like [Loxodonta africana]
          Length = 483

 Score = 81.3 bits (199), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/70 (52%), Positives = 43/70 (61%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  AL  WS    L+F ++N   ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 142 IEMALQAWSSAIPLSFVKLNTGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGG 201

Query: 82  DAHFDIDEDW 91
           D HFD  E W
Sbjct: 202 DTHFDNAEKW 211


>gi|448262550|pdb|4GR8|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
          In Complex With Selective Phosphinic Inhibitor Rxp470c
          Length = 152

 Score = 81.3 bits (199), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 22 LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
          +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 24 IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDDHAFDGKGGILAHAFGPGSGIGG 83

Query: 82 DAHFDIDEDWMV 93
          DAHFD DE W  
Sbjct: 84 DAHFDEDEFWTT 95


>gi|1633203|pdb|1JAQ|A Chain A, Complex Of 1-Hydroxylamine-2-Isobutylmalonyl-Ala-Gly-Nh2
           With The Catalytic Domain Of Matrix Metallo Proteinase-8
           (Met80 Form)
 gi|1633204|pdb|1JAP|A Chain A, Complex Of Pro-Leu-Gly-Hydroxylamine With The Catalytic
           Domain Of Matrix Metallo Proteinase-8 (Met80 Form)
 gi|1633206|pdb|1JAO|A Chain A, Complex Of 3-Mercapto-2-Benzylpropanoyl-Ala-Gly-Nh2 With
           The Catalytic Domain Of Matrix Metallo Proteinase-8
           (Met80 Form)
 gi|13787018|pdb|1I73|A Chain A, Complex Of Pro-Leu-L-Trp Phosphonate With The Catalitic
           Domain Of Matrix Metallo Proteinase-8 (Met80 Form)
 gi|13787020|pdb|1I76|A Chain A, Complex Of 2-(Biphenyl-4-Sulfonyl)-1,2,3,4-Tetrahydro-
           Isoquinoline-3-Carboxylic Acid (D-Tic Derivative) With T
           Catalitic Domain Of Matrix Metallo Proteinase-8 (Met80
           Form)
 gi|15825971|pdb|1JJ9|A Chain A, Crystal Structure Of Mmp8-Barbiturate Complex Reveals
           Mechanism For Collagen Substrate Recognition
 gi|83753841|pdb|1ZP5|A Chain A, Crystal Structure Of The Complex Between Mmp-8 And A N-
           Hydroxyurea Inhibitor
 gi|99031738|pdb|1ZS0|A Chain A, Crystal Structure Of The Complex Between Mmp-8 And A
           Phosphonate Inhibitor (s-enantiomer)
 gi|109157078|pdb|1ZVX|A Chain A, Crystal Structure Of The Complex Between Mmp-8 And A
           Phosphonate Inhibitor (r-enantiomer)
 gi|157832006|pdb|1MMB|A Chain A, Complex Of Bb94 With The Catalytic Domain Of Matrix
           Metalloproteinase-8
 gi|224510629|pdb|3DNG|A Chain A, Crystal Structure Of The Complex Between Mmp-8 And A Non-
           Zinc Chelating Inhibitor
 gi|224510630|pdb|3DNG|B Chain B, Crystal Structure Of The Complex Between Mmp-8 And A Non-
           Zinc Chelating Inhibitor
 gi|224510635|pdb|3DPE|A Chain A, Crystal Structure Of The Complex Between Mmp-8 And A Non-
           Zinc Chelating Inhibitor
 gi|224510636|pdb|3DPF|A Chain A, Crystal Structure Of The Complex Between Mmp-8 And A Non-
           Zinc Chelating Inhibitor
 gi|224510637|pdb|3DPF|B Chain B, Crystal Structure Of The Complex Between Mmp-8 And A Non-
           Zinc Chelating Inhibitor
          Length = 163

 Score = 81.3 bits (199), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDELRRAL----DVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+    ++WS  S L F  ++   ADI I F + +H D  PFDG
Sbjct: 17  RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 76

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           P  ILAHAF PG G GGDAHFD +E W
Sbjct: 77  PNGILAHAFQPGQGIGGDAHFDAEETW 103


>gi|444724330|gb|ELW64937.1| Stromelysin-1 [Tupaia chinensis]
          Length = 476

 Score = 81.3 bits (199), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     RD     + +AL +W + + LTF ++++  ADI+I F    H D  
Sbjct: 112 HLTYRIVNYTPDLPRDAVDSAIEKALKIWEEVTPLTFSKIHEGEADIMISFAVREHGDFS 171

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG++LAHA+ PG G  GDAHFD DE W
Sbjct: 172 PFDGPGQVLAHAYPPGQGIYGDAHFDDDEQW 202


>gi|426245554|ref|XP_004016575.1| PREDICTED: neutrophil collagenase [Ovis aries]
          Length = 470

 Score = 81.3 bits (199), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/70 (52%), Positives = 43/70 (61%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +     VWS  S LTF   +D  ADI I F +++H D  PFDGP  ILAHAF PG G GG
Sbjct: 136 IETGFKVWSDVSPLTFNRTSDKEADIQISFAQKDHGDNSPFDGPNGILAHAFQPGPGIGG 195

Query: 82  DAHFDIDEDW 91
           D HFD +E W
Sbjct: 196 DVHFDAEETW 205


>gi|38267|emb|CAA28858.1| unnamed protein product [Homo sapiens]
          Length = 469

 Score = 81.3 bits (199), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 113 HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW----MVLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHAF PG G GGDAHFD  E W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPGGNLAHAFQPGPGIGGDAHFDEHERWTNNFTEYNLHRVAAHELGHSLGLSHSTD 231


>gi|9955201|pdb|1C8T|A Chain A, Human Stromelysin-1 (E202q) Catalytic Domain Complexed
           With Ro-26-2812
 gi|9955202|pdb|1C8T|B Chain B, Human Stromelysin-1 (E202q) Catalytic Domain Complexed
           With Ro-26-2812
          Length = 167

 Score = 81.3 bits (199), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 32  VEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 91

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 92  DAHFDDDEQW 101


>gi|355752575|gb|EHH56695.1| hypothetical protein EGM_06158 [Macaca fascicularis]
          Length = 483

 Score = 81.3 bits (199), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 46/86 (53%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           K         +   ++ AL  WS    L+F  +N   ADI+I FE  +H D YPFDGP  
Sbjct: 128 KYTTSMSSAEVEKAVQMALQAWSSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRG 187

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDWMV 93
            LAHAF PG G GGD HFD  E W +
Sbjct: 188 TLAHAFAPGEGLGGDTHFDNAEKWTM 213


>gi|225706878|gb|ACO09285.1| Collagenase 3 precursor [Osmerus mordax]
          Length = 470

 Score = 81.3 bits (199), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 41/80 (51%), Positives = 48/80 (60%), Gaps = 1/80 (1%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW+K S LTF  +    ADI++ F    H D YPFDGP   LAHAF P  G GG
Sbjct: 131 IEKALQVWAKVSPLTFTRIYSGNADIMVSFGGREHGDFYPFDGPDGTLAHAFAPSPGIGG 190

Query: 82  DAHFDIDEDWMVLGVSRSAN 101
           DAHFD DE +   G SR  N
Sbjct: 191 DAHFDEDETF-TFGSSRGYN 209


>gi|74148102|dbj|BAE36227.1| unnamed protein product [Mus musculus]
          Length = 730

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 46/77 (59%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VW + + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDMIDDAFARAFAVWGEVAPLTFTRVYGPEADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG+G  GDAHFD DE W
Sbjct: 194 PGAGVQGDAHFDDDELW 210


>gi|460864|gb|AAB28942.1| type IV collagenase [Mus sp.]
          Length = 730

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 46/77 (59%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VW + + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDMIDDAFARAFAVWGEVAPLTFTRVYGPEADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG+G  GDAHFD DE W
Sbjct: 194 PGAGVQGDAHFDDDELW 210


>gi|390341929|ref|XP_003725556.1| PREDICTED: matrix metalloproteinase-24-like [Strongylocentrotus
           purpuratus]
          Length = 646

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 49/106 (46%), Positives = 60/106 (56%), Gaps = 9/106 (8%)

Query: 17  RLRDELRRALDVWSKHSKLTFREV--NDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           ++R E+ R L VWS  + L F+E+       DI I F  + H D YPFDG G  LAHAF+
Sbjct: 167 QVRREVLRGLKVWSDVTPLKFQELRYGMGEPDIHIQFAAQEHNDEYPFDGQGGTLAHAFY 226

Query: 75  PGSGRGGDAHFDIDEDWMVLGVSRSAN-----ADE-GKSLELANAD 114
           PG G GGDAHFD DE +   G S   N     A E G SL L ++D
Sbjct: 227 PGPGLGGDAHFDEDEQFTA-GTSEGTNLFFVAAHELGHSLGLGHSD 271


>gi|213424023|pdb|2K9C|A Chain A, Paramagnetic Shifts In Solid-State Nmr Of Proteins To
          Elicit Structural Information
 gi|289526480|pdb|2KRJ|A Chain A, High-Resolution Solid-State Nmr Structure Of A 17.6 Kda
          Prot
          Length = 152

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 22 LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
          +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 23 IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDDHAFDGKGGILAHAFGPGSGIGG 82

Query: 82 DAHFDIDEDWMV 93
          DAHFD DE W  
Sbjct: 83 DAHFDEDEFWTT 94


>gi|415981|emb|CAA81745.1| CLG4B [Mus musculus]
          Length = 730

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 46/77 (59%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VW + + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDMIDDAFARAFAVWGEVAPLTFTRVYGPEADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG+G  GDAHFD DE W
Sbjct: 194 PGAGVQGDAHFDDDELW 210


>gi|402895048|ref|XP_003910647.1| PREDICTED: matrix metalloproteinase-20 [Papio anubis]
          Length = 483

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 46/86 (53%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           K         +   ++ AL  WS    L+F  +N   ADI+I FE  +H D YPFDGP  
Sbjct: 128 KYTTSMSSAEVEKAVQMALQAWSSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRG 187

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDWMV 93
            LAHAF PG G GGD HFD  E W +
Sbjct: 188 TLAHAFAPGEGLGGDTHFDNAEKWTM 213


>gi|432953088|ref|XP_004085285.1| PREDICTED: collagenase 3-like [Oryzias latipes]
          Length = 497

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/75 (49%), Positives = 47/75 (62%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           +  ++D ++RAL VW+  + L F   N   ADI++ F +  H D YPFDGP   LAHAF 
Sbjct: 155 QAEVQDSIQRALQVWASVTPLRFTRTNSGPADIMVSFGRGAHGDYYPFDGPHGTLAHAFS 214

Query: 75  PGSGRGGDAHFDIDE 89
           P SG GGD HFD DE
Sbjct: 215 PSSGIGGDVHFDDDE 229


>gi|5821975|pdb|1CAQ|A Chain A, X-Ray Structure Of Human Stromelysin Catalytic Domain
           Complexes With Non-Peptide Inhibitors: Implication For
           Inhibitor Selectivity
 gi|6137637|pdb|1CIZ|A Chain A, X-ray Structure Of Human Stromelysin Catalytic Domain
           Complexes With Non-peptide Inhibitors: Implication For
           Inhibitor Selectivity
 gi|14278317|pdb|1G4K|A Chain A, X-ray Structure Of A Novel Matrix Metalloproteinase
           Inhibitor Complexed To Stromelysin
 gi|14278318|pdb|1G4K|B Chain B, X-ray Structure Of A Novel Matrix Metalloproteinase
           Inhibitor Complexed To Stromelysin
 gi|14278319|pdb|1G4K|C Chain C, X-ray Structure Of A Novel Matrix Metalloproteinase
           Inhibitor Complexed To Stromelysin
 gi|34811010|pdb|1OO9|A Chain A, Orientation In Solution Of Mmp-3 Catalytic Domain And N-
           Timp-1 From Residual Dipolar Couplings
 gi|157836903|pdb|3USN|A Chain A, Structure Of The Catalytic Domain Of Human Fibroblast
           Stromelysin-1 Inhibited With The Thiadiazole Inhibitor
           Ipnu-107859, Nmr, 1 Structure
          Length = 168

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 35  VEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 94

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 95  DAHFDDDEQW 104


>gi|2392404|pdb|1KBC|A Chain A, Procarboxypeptidase Ternary Complex
 gi|2392405|pdb|1KBC|B Chain B, Procarboxypeptidase Ternary Complex
 gi|410375180|pdb|1JAN|A Chain A, Complex Of Pro-Leu-Gly-Hydroxylamine With The Catalytic
           Domain Of Matrix Metallo Proteinase-8 (Phe79 Form)
          Length = 164

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDELRRAL----DVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+    ++WS  S L F  ++   ADI I F + +H D  PFDG
Sbjct: 18  RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 77

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           P  ILAHAF PG G GGDAHFD +E W
Sbjct: 78  PNGILAHAFQPGQGIGGDAHFDAEETW 104


>gi|110591109|pdb|2D1O|A Chain A, Stromelysin-1 (Mmp-3) Complexed To A Hydroxamic Acid
           Inhibitor
 gi|110591110|pdb|2D1O|B Chain B, Stromelysin-1 (Mmp-3) Complexed To A Hydroxamic Acid
           Inhibitor
          Length = 171

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 35  VEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 94

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 95  DAHFDDDEQW 104


>gi|397516418|ref|XP_003828427.1| PREDICTED: neutrophil collagenase isoform 1 [Pan paniscus]
          Length = 467

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 8/115 (6%)

Query: 9   RVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+     +WS  S L F  ++   ADI I F + +H D  PFDG
Sbjct: 116 RIRNYTPQLSEAEVERAIKDAFKLWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 175

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           P  ILAHAF PG G GGDAHFD +E W     + +    A  + G SL LA++ +
Sbjct: 176 PNGILAHAFQPGQGIGGDAHFDAEETWTDTSANYNLFLVAAHEFGHSLGLAHSSD 230


>gi|62635470|gb|AAX90605.1| matrix metalloproteinase 9 [Mus musculus]
          Length = 730

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 46/77 (59%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VW + + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDMIDDAFARAFAVWGEVAPLTFTRVYGPEADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG+G  GDAHFD DE W
Sbjct: 194 PGAGVQGDAHFDDDELW 210


>gi|380806901|gb|AFE75326.1| 72 kDa type IV collagenase isoform a preproprotein, partial [Macaca
           mulatta]
          Length = 270

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 50/80 (62%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 131 DPETVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAF 190

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG+G GGD+HFD DE W +
Sbjct: 191 APGTGVGGDSHFDDDELWTL 210


>gi|351709969|gb|EHB12888.1| Macrophage metalloelastase [Heterocephalus glaber]
          Length = 403

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 3/89 (3%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           +K++   +RH D   + D +++A  VWS  + L FR++N  +ADI+I F   +H D   F
Sbjct: 52  IKNYTPDMRHQD---VDDVIQKAFQVWSDVTPLKFRKINVGKADIMIVFAYGDHGDFNSF 108

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           DG G ILAHAF PGSG GGD HFD  E W
Sbjct: 109 DGRGGILAHAFGPGSGIGGDTHFDEAETW 137


>gi|340707742|pdb|3OHO|A Chain A, Catalytic Domain Of Stromelysin-1 In Complex With
           N-Hydroxy-2-(4- Methylphenylsulfonamido)acetamide
          Length = 169

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI+I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 35  VEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 94

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 95  DAHFDDDEQW 104


>gi|348521346|ref|XP_003448187.1| PREDICTED: matrix metalloproteinase-9 [Oreochromis niloticus]
          Length = 680

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/80 (50%), Positives = 49/80 (61%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + LTF  + D  ADI+I F K++H D YPFDG   +LAHA+
Sbjct: 135 DSAIIDDAFARAFKVWSDVTPLTFTRLYDGTADIMISFGKKDHGDPYPFDGKDGLLAHAY 194

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG G  GDAHFD DE W +
Sbjct: 195 PPGEGIQGDAHFDDDEFWTL 214


>gi|7305277|ref|NP_038627.1| matrix metalloproteinase-9 precursor [Mus musculus]
 gi|341940960|sp|P41245.2|MMP9_MOUSE RecName: Full=Matrix metalloproteinase-9; Short=MMP-9; AltName:
           Full=92 kDa gelatinase; AltName: Full=92 kDa type IV
           collagenase; AltName: Full=Gelatinase B; Short=GELB;
           Flags: Precursor
 gi|433433|emb|CAA51314.1| gelatinase b [Mus musculus]
 gi|28461347|gb|AAH46991.1| Matrix metallopeptidase 9 [Mus musculus]
 gi|74192922|dbj|BAE34968.1| unnamed protein product [Mus musculus]
          Length = 730

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 46/77 (59%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VW + + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDMIDDAFARAFAVWGEVAPLTFTRVYGPEADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG+G  GDAHFD DE W
Sbjct: 194 PGAGVQGDAHFDDDELW 210


>gi|12835973|dbj|BAB23442.1| unnamed protein product [Mus musculus]
          Length = 730

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 46/77 (59%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VW + + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDMIDDAFARAFAVWGEVAPLTFTRVYGPEADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG+G  GDAHFD DE W
Sbjct: 194 PGAGVQGDAHFDDDELW 210


>gi|286080|dbj|BAA02208.1| gelatinase [Mus musculus]
 gi|148674491|gb|EDL06438.1| matrix metallopeptidase 9 [Mus musculus]
          Length = 730

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 46/77 (59%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VW + + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDMIDDAFARAFAVWGEVAPLTFTRVYGPEADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG+G  GDAHFD DE W
Sbjct: 194 PGAGVQGDAHFDDDELW 210


>gi|148727872|gb|ABR08571.1| matrix metalloproteinase 2 [Serinus canaria]
          Length = 489

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/74 (51%), Positives = 46/74 (62%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF PG G 
Sbjct: 93  DAFARAFQVWSDVTPLRFNRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGI 152

Query: 80  GGDAHFDIDEDWMV 93
           GG +HFD DE W +
Sbjct: 153 GGGSHFDDDELWTL 166


>gi|402895060|ref|XP_003910653.1| PREDICTED: stromelysin-1 [Papio anubis]
          Length = 477

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDEL----RRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y +    D +     +A+ VW + + LTF  + +  ADI+I F    H D Y
Sbjct: 113 HLTYRIVNYTQDLPEDAIDSAIEKAVKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFY 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG +LAHA+ PG G  GDAHFD DE W
Sbjct: 173 PFDGPGNVLAHAYAPGPGINGDAHFDDDEQW 203


>gi|297263898|ref|XP_002798895.1| PREDICTED: matrix metalloproteinase-17-like [Macaca mulatta]
          Length = 845

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 47/90 (52%), Positives = 53/90 (58%), Gaps = 7/90 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 381 RVRTFPRDSPLGRDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQIDFSKADHNDGYPF 440

Query: 63  DGPGKILAHAFFPGSGR-GGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 441 DGPGGTVAHAFFPGDHHTAGDTHFDDDEAW 470


>gi|4929859|pdb|1A86|A Chain A, Mmp8 With Malonic And Aspartic Acid Based Inhibitor
 gi|18158815|pdb|1JH1|A Chain A, Crystal Structure Of Mmp-8 Complexed With A 6h-1,3,4-
          Thiadiazine Derived Inhibitor
 gi|134105470|pdb|2OY2|A Chain A, Human Mmp-8 In Complex With Peptide Iag
 gi|134105472|pdb|2OY2|F Chain F, Human Mmp-8 In Complex With Peptide Iag
 gi|134105474|pdb|2OY4|A Chain A, Uninhibited Human Mmp-8
 gi|134105475|pdb|2OY4|F Chain F, Uninhibited Human Mmp-8
 gi|440923787|pdb|1A85|A Chain A, Mmp8 With Malonic And Asparagine Based Inhibitor
          Length = 158

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 4/88 (4%)

Query: 9  RVRHYDRGRLRDELRRAL----DVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
          R+R+Y       E+ RA+    ++WS  S L F  ++   ADI I F + +H D  PFDG
Sbjct: 12 RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 71

Query: 65 PGKILAHAFFPGSGRGGDAHFDIDEDWM 92
          P  ILAHAF PG G GGDAHFD +E W 
Sbjct: 72 PNGILAHAFQPGQGIGGDAHFDAEETWT 99


>gi|114793614|pdb|2CLT|A Chain A, Crystal Structure Of The Active Form (Full-Length) Of
           Human Fibroblast Collagenase.
 gi|114793615|pdb|2CLT|B Chain B, Crystal Structure Of The Active Form (Full-Length) Of
           Human Fibroblast Collagenase.
 gi|394986238|pdb|4AUO|A Chain A, Crystal Structure Of Mmp-1(E200a) In Complex With A
           Triple- Helical Collagen Peptide
 gi|394986239|pdb|4AUO|B Chain B, Crystal Structure Of Mmp-1(E200a) In Complex With A
           Triple- Helical Collagen Peptide
          Length = 367

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 14  HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 73

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG  LAHAF PG G GGDAHFD DE W
Sbjct: 74  PFDGPGGNLAHAFQPGPGIGGDAHFDEDERW 104


>gi|397516420|ref|XP_003828428.1| PREDICTED: neutrophil collagenase isoform 2 [Pan paniscus]
          Length = 444

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 8/115 (6%)

Query: 9   RVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+     +WS  S L F  ++   ADI I F + +H D  PFDG
Sbjct: 93  RIRNYTPQLSEAEVERAIKDAFKLWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 152

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           P  ILAHAF PG G GGDAHFD +E W     + +    A  + G SL LA++ +
Sbjct: 153 PNGILAHAFQPGQGIGGDAHFDAEETWTDTSANYNLFLVAAHEFGHSLGLAHSSD 207


>gi|392311625|pdb|3TT4|A Chain A, Human Mmp8 In Complex With L-Glutamate Motif Inhibitor
          Length = 159

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 4/88 (4%)

Query: 9   RVRHYDRGRLRDELRRAL----DVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+    ++WS  S L F  ++   ADI I F + +H D  PFDG
Sbjct: 13  RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 72

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWM 92
           P  ILAHAF PG G GGDAHFD +E W 
Sbjct: 73  PNGILAHAFQPGQGIGGDAHFDAEETWT 100


>gi|291383995|ref|XP_002708614.1| PREDICTED: matrix metalloproteinase 20 [Oryctolagus cuniculus]
          Length = 483

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/72 (52%), Positives = 43/72 (59%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  AL  WS    L+F  VN   ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 142 IEMALRAWSSAVPLSFVRVNAGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGG 201

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 202 DTHFDNAEKWTM 213


>gi|403262933|ref|XP_003923819.1| PREDICTED: neutrophil collagenase [Saimiri boliviensis boliviensis]
          Length = 465

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/67 (55%), Positives = 42/67 (62%)

Query: 25  ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
           A  +WS  S LTF  ++   ADI I F   +H D  PFDGP  ILAHAF PG G GGDAH
Sbjct: 136 AFKIWSDPSPLTFTRISQGEADINIAFFPRDHGDNSPFDGPNGILAHAFQPGQGIGGDAH 195

Query: 85  FDIDEDW 91
           FD +E W
Sbjct: 196 FDAEETW 202


>gi|345799783|ref|XP_546547.3| PREDICTED: neutrophil collagenase [Canis lupus familiaris]
          Length = 476

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/70 (52%), Positives = 45/70 (64%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++A  VWS  S LTF +V+    DI I F + +H D  PFDGP  ILAHAF PG G GG
Sbjct: 144 IQKAFQVWSNVSPLTFTKVSQGEVDIRISFVQGDHGDNSPFDGPNGILAHAFQPGQGIGG 203

Query: 82  DAHFDIDEDW 91
           D HFD +E W
Sbjct: 204 DVHFDAEETW 213


>gi|8569322|pdb|1BZS|A Chain A, Crystal Structure Of Mmp8 Complexed With Hmr2909
          Length = 165

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDELRRAL----DVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+    ++WS  S L F  ++   ADI I F + +H D  PFDG
Sbjct: 18  RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 77

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           P  ILAHAF PG G GGDAHFD +E W
Sbjct: 78  PNGILAHAFQPGQGIGGDAHFDAEETW 104


>gi|426370252|ref|XP_004052082.1| PREDICTED: neutrophil collagenase [Gorilla gorilla gorilla]
          Length = 467

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 8/115 (6%)

Query: 9   RVRHYDRGRLRDELRRAL----DVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+    ++W   S L F  ++   ADI I F + +H D  PFDG
Sbjct: 116 RIRNYTPQLSVAEVERAIKDAFELWGVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 175

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           P  ILAHAF PG G GGDAHFD +E W     S +    A  + G SL LA++ +
Sbjct: 176 PNGILAHAFQPGQGIGGDAHFDAEETWTNTSASYNLFLVAAHEFGHSLGLAHSSD 230


>gi|1000037|pdb|1CGL|A Chain A, Structure Of The Catalytic Domain Of Fibroblast
           Collagenase Complexed With An Inhibitor
 gi|1000038|pdb|1CGL|B Chain B, Structure Of The Catalytic Domain Of Fibroblast
           Collagenase Complexed With An Inhibitor
          Length = 169

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 4/96 (4%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A  +WS  + LTF +V++ +ADI+I F + +H D  PFDGPG  LAHAF PG G GG
Sbjct: 34  IEKAFQLWSDVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFDPGPGIGG 93

Query: 82  DAHFDIDEDWM----VLGVSRSANADEGKSLELANA 113
           DAHFD DE W        + R A  + G SL L+++
Sbjct: 94  DAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHS 129


>gi|147901930|ref|NP_001079682.1| matrix metallopeptidase 7 (matrilysin, uterine) precursor [Xenopus
           laevis]
 gi|28461366|gb|AAH46939.1| MGC53510 protein [Xenopus laevis]
          Length = 259

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/77 (50%), Positives = 47/77 (61%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D ++RA  VWS  + L F +V+   ADI I F    H D  PFDGP  +LAHA+ 
Sbjct: 118 RQVVDDAIQRAFGVWSNVTPLQFTKVSSGNADIFIRFGARTHGDSNPFDGPSGVLAHAYG 177

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G GGDAHFD DE W
Sbjct: 178 PGRGIGGDAHFDEDERW 194


>gi|213972541|ref|NP_598214.1| collagenase 3 precursor [Rattus norvegicus]
 gi|149020733|gb|EDL78538.1| matrix metallopeptidase 13 [Rattus norvegicus]
          Length = 472

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 45/70 (64%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 139 FRKAFKVWSDVTPLNFTRIHDGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNLGG 198

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 199 DAHFDDDETW 208


>gi|332209243|ref|XP_003253720.1| PREDICTED: matrix metalloproteinase-9 isoform 1 [Nomascus
           leucogenys]
          Length = 702

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD DE W     V+  +R  NAD G +       EGR +
Sbjct: 194 PGPGIQGDAHFDDDELWSLGKGVVVPTRFGNAD-GAACHFPFIFEGRSY 241


>gi|388453975|ref|NP_001253834.1| matrix metalloproteinase-9 precursor [Macaca mulatta]
 gi|355563070|gb|EHH19632.1| Matrix metalloproteinase-9 [Macaca mulatta]
 gi|383418493|gb|AFH32460.1| matrix metalloproteinase-9 preproprotein [Macaca mulatta]
          Length = 707

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/109 (44%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIEDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD DE W     V+  ++  NAD G +       EGR +
Sbjct: 194 PGPGIQGDAHFDDDELWSLGKGVVVPTKFGNAD-GAACHFPFTFEGRSY 241


>gi|10120630|pdb|1CXV|A Chain A, Structure Of Recombinant Mouse Collagenase-3 (Mmp-13)
 gi|10120631|pdb|1CXV|B Chain B, Structure Of Recombinant Mouse Collagenase-3 (Mmp-13)
          Length = 164

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 45/75 (60%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
            +    R+A  VWS  + L F  + D  ADI+I F  + H D YPFDGP  +LAHAF PG
Sbjct: 30  EVEKAFRKAFKVWSDVTPLNFTRIYDGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPG 89

Query: 77  SGRGGDAHFDIDEDW 91
              GGDAHFD DE W
Sbjct: 90  PNYGGDAHFDDDETW 104


>gi|9506899|ref|NP_062344.1| stromelysin-2 precursor [Mus musculus]
 gi|13124340|sp|O55123.1|MMP10_MOUSE RecName: Full=Stromelysin-2; Short=SL-2; AltName: Full=Matrix
           metalloproteinase-10; Short=MMP-10; AltName:
           Full=Transin-2; Flags: Precursor
 gi|2791312|emb|CAA73641.1| stromelysin 2 [Mus musculus]
 gi|12860835|dbj|BAB32058.1| unnamed protein product [Mus musculus]
 gi|120538365|gb|AAI30028.1| Matrix metallopeptidase 10 [Mus musculus]
 gi|148692989|gb|EDL24936.1| mCG9885 [Mus musculus]
          Length = 476

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 8/101 (7%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +   + +AL VW + + LTF  +++  ADI+I F    H D YPFDGPG+ LAHA+ 
Sbjct: 127 RQSVDSAIEKALKVWEEVTPLTFSRISEGEADIMISFAVGEHGDFYPFDGPGQSLAHAYP 186

Query: 75  PGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           PG G  GD HFD DE W +        A  G +L L  A E
Sbjct: 187 PGPGFYGDVHFDDDEKWTL--------APSGTNLFLVAAHE 219


>gi|116872|sp|P23097.1|MMP13_RAT RecName: Full=Collagenase 3; AltName: Full=Matrix
           metalloproteinase-13; Short=MMP-13; AltName:
           Full=UMRCASE; Flags: Precursor
 gi|203499|gb|AAA72124.1| collagenase, partial [Rattus norvegicus]
          Length = 466

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 45/70 (64%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 133 FRKAFKVWSDVTPLNFTRIHDGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNLGG 192

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 193 DAHFDDDETW 202


>gi|403262939|ref|XP_003923822.1| PREDICTED: matrix metalloproteinase-20 [Saimiri boliviensis
           boliviensis]
          Length = 483

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/69 (53%), Positives = 41/69 (59%)

Query: 25  ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
           AL  WS    L F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GGD H
Sbjct: 145 ALQAWSSAVPLNFVRINSGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTH 204

Query: 85  FDIDEDWMV 93
           FD  E W +
Sbjct: 205 FDNAEKWTM 213


>gi|348573591|ref|XP_003472574.1| PREDICTED: stromelysin-2-like [Cavia porcellus]
          Length = 519

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRD----ELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y +   RD     +++AL +W + + LTF  + +  ADI+I F    H D YPFDG
Sbjct: 117 RIVNYTQDLPRDAVDSSIKKALKIWEEVTPLTFSRIYEGEADIMISFAVREHGDFYPFDG 176

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PG  LAHA+ PG G  GD HFD DE W
Sbjct: 177 PGMSLAHAYPPGPGFYGDVHFDDDEKW 203


>gi|46560178|gb|AAT00547.1| matrix metalloproteinase 7 [Xenopus laevis]
          Length = 252

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/77 (50%), Positives = 47/77 (61%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D ++RA  VWS  + L F +V+   ADI I F    H D  PFDGP  +LAHA+ 
Sbjct: 118 RQVVDDAIQRAFGVWSNVTPLQFTKVSSGNADIFIRFGARTHGDSNPFDGPSGVLAHAYG 177

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G GGDAHFD DE W
Sbjct: 178 PGRGIGGDAHFDEDERW 194


>gi|34810827|pdb|1OS2|A Chain A, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
 gi|34810828|pdb|1OS2|B Chain B, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
 gi|34810829|pdb|1OS2|C Chain C, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
 gi|34810830|pdb|1OS2|D Chain D, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
 gi|34810831|pdb|1OS2|E Chain E, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
 gi|34810832|pdb|1OS2|F Chain F, Ternary Enzyme-Product-Inhibitor Complexes Of Human Mmp12
 gi|34810833|pdb|1OS9|A Chain A, Binary Enzyme-Product Complexes Of Human Mmp12
 gi|34810834|pdb|1OS9|B Chain B, Binary Enzyme-Product Complexes Of Human Mmp12
 gi|34810835|pdb|1OS9|C Chain C, Binary Enzyme-Product Complexes Of Human Mmp12
 gi|34810836|pdb|1OS9|D Chain D, Binary Enzyme-Product Complexes Of Human Mmp12
 gi|34810837|pdb|1OS9|E Chain E, Binary Enzyme-Product Complexes Of Human Mmp12
 gi|34810838|pdb|1OS9|F Chain F, Binary Enzyme-Product Complexes Of Human Mmp12
          Length = 165

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 31  IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDDHAFDGKGGILAHAFGPGSGIGG 90

Query: 82  DAHFDIDEDWMV 93
           DAHFD DE W  
Sbjct: 91  DAHFDEDEFWTT 102


>gi|58176632|pdb|1RMZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           Complexed With The Inhibitor Nngh At 1.3 A Resolution
 gi|122920455|pdb|2HU6|A Chain A, Crystal Structure Of Human Mmp-12 In Complex With
           Acetohydroxamic Acid And A Bicyclic Inhibitor
 gi|134105464|pdb|2OXU|A Chain A, Uninhibited Form Of Human Mmp-12
 gi|134105465|pdb|2OXW|A Chain A, Human Mmp-12 Complexed With The Peptide Iag
 gi|134105467|pdb|2OXZ|A Chain A, Human Mmp-12 In Complex With Two Peptides Pqg And Iag
 gi|159163643|pdb|1YCM|A Chain A, Solution Structure Of Matrix Metalloproteinase 12 (Mmp12)
           In The Presence Of N-Isobutyl-N-[4-
           Methoxyphenylsulfonyl]glycyl Hydroxamic Acid (Nngh)
 gi|159163662|pdb|1Z3J|A Chain A, Solution Structure Of Mmp12 In The Presence Of
           N-Isobutyl-N- 4-Methoxyphenylsulfonyl]glycyl Hydroxamic
           Acid (Nngh)
 gi|291191398|pdb|1Y93|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           Complexed With Acetohydroxamic Acid At Atomic Resolution
 gi|305677774|pdb|3LIK|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
 gi|305677775|pdb|3LIL|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
 gi|305677776|pdb|3LIR|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
 gi|305677777|pdb|3LJG|A Chain A, Human Mmp12 In Complex With Non-Zinc Chelating Inhibitor
 gi|392311623|pdb|3TS4|A Chain A, Human Mmp12 In Complex With L-Glutamate Motif Inhibitor
 gi|392311624|pdb|3TSK|A Chain A, Human Mmp12 In Complex With L-Glutamate Motif Inhibitor
 gi|392311755|pdb|4EFS|A Chain A, Human Mmp12 In Complex With L-Glutamate Motif Inhibitor
 gi|448262547|pdb|4GQL|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           In Complex With Selective Phosphinic Inhibitor Rxp470.1
 gi|448262548|pdb|4GR0|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           In Complex With Selective Phosphinic Inhibitor Rxp470b
 gi|448262549|pdb|4GR3|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           In Complex With Selective Phosphinic Inhibitor Rxp470a
          Length = 159

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 30  IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDDHAFDGKGGILAHAFGPGSGIGG 89

Query: 82  DAHFDIDEDWMV 93
           DAHFD DE W  
Sbjct: 90  DAHFDEDEFWTT 101


>gi|402882364|ref|XP_003904714.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-9 [Papio
           anubis]
          Length = 707

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/109 (44%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIEDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD DE W     V+  ++  NAD G +       EGR +
Sbjct: 194 PGPGIQGDAHFDDDELWSLGKGVVVPTKFGNAD-GAACHFPFTFEGRSY 241


>gi|390469639|ref|XP_002754399.2| PREDICTED: collagenase 3 [Callithrix jacchus]
          Length = 680

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 347 FRKAFKVWSDVTPLNFTRLHDGTADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 406

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 407 DAHFDDDETW--------TSSSKGYNLFLVAAHE 432


>gi|213424472|pdb|3F15|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           Complexed With The Inhibitor
           (S)-N-(2,3-Dihydroxypropyl)-4-
           Methoxy-N-(2-Nitroso-2-Oxoethyl)benzenesulfonamide
 gi|213424473|pdb|3F16|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           Complexed With The Inhibitor
           (R)-N-(3-Hydroxy-1-Nitroso-1-
           Oxopropan-2-Yl)-4-Methoxybenzenesulfonamide
 gi|213424527|pdb|3F17|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           Complexed With The Inhibitor N-(2-Nitroso-2-Oxoethyl)
           Biphenyl-4-Sulfonamide
 gi|213424536|pdb|3F18|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           Complexed With The Inhibitor
           4-Fluoro-N-(2-Hydroxyethyl)-N-
           (2-Nitroso-2-Oxoethyl)benzenesulfonamide
 gi|213424542|pdb|3F19|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           Complexed With The Inhibitor 4-Fluoro-N-(2-Nitroso-2-
           Oxoethyl)benzenesulfonamide
 gi|213424543|pdb|3F1A|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           Complexed With The Inhibitor N-(2-Nitroso-2-Oxoethyl)
           Benzenesulfonamide
 gi|237823818|pdb|3EHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           Complexed With The Inhibitor (R)-2-(Biphenyl-4-
           Ylsulfonamido)-4-Methylpentanoic Acid
 gi|237823819|pdb|3EHY|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           Complexed With The Inhibitor (R)-2-(4-
           Methoxyphenylsulfonamido)propanoic Acid
 gi|295982407|pdb|3LKA|A Chain A, Catalytic Domain Of Human Mmp-12 Complexed With Hydroxamic
           Acid And Paramethoxy-Sulfonyl Amide
 gi|301598833|pdb|3NX7|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           Complexed With The Inhibitor
           N-Hydroxy-2-(N-(2-Hydroxyethyl)4-
           Methoxyphenylsulfonamido)acetamide
 gi|308198526|pdb|3LK8|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           Complexed With The Inhibitor
           Paramethoxy-Sulfonyl-Glycine Hydroxamate
 gi|311772155|pdb|3N2U|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           Complexed With The Inhibitor
           N-Hydroxy-2-(4-Methoxy-N(2-(3,4,5-Trihydroxy-6-
           (Hydroxymethyl)tetrahydro-2h-Pyran-2-
           Yloxy)ethyl)phenylsulfonamido) Acetamide
 gi|311772156|pdb|3N2V|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mmp12
           Complexed With The Inhibitor
           N-Hydroxy-2-(N-Hydroxyethyl)biphenyl-4-
           Ylsulfonamido)acetamide
 gi|393715146|pdb|3RTS|A Chain A, Human Mmp-12 Catalytic Domain In Complex
           WithN-Hydroxy-2-(2- Phenylethylsulfonamido)acetamide
 gi|393715147|pdb|3RTT|A Chain A, Human Mmp-12 Catalytic Domain In Complex
           With(R)-N-Hydroxy-1-
           (Phenethylsulfonyl)pyrrolidine-2-Carboxamide
 gi|405945115|pdb|4GUY|A Chain A, Human Mmp12 Catalytic Domain In Complex
           WithN-Hydroxy-2-(2-(4-
           Methoxyphenyl)ethylsulfonamido)acetamide
          Length = 158

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 29  IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDDHAFDGKGGILAHAFGPGSGIGG 88

Query: 82  DAHFDIDEDWMV 93
           DAHFD DE W  
Sbjct: 89  DAHFDEDEFWTT 100


>gi|4835889|gb|AAD30285.1| MMP-7 protein [Bos taurus]
          Length = 126

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A  +WS+   LTF+ +    ADI+I F +  H D YPFDGPG  LAHAF PG G GG
Sbjct: 41  VAKAFKIWSEAIPLTFKRLRWGTADIMIGFARRAHGDPYPFDGPGATLAHAFAPGPGLGG 100

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 101 DAHFDEDERW 110


>gi|1705980|sp|P55032.1|MMP7_FELCA RecName: Full=Matrilysin; AltName: Full=Matrin; AltName:
           Full=Matrix metalloproteinase-7; Short=MMP-7; AltName:
           Full=Pump-1 protease; AltName: Full=Uterine
           metalloproteinase; Flags: Precursor
 gi|436482|gb|AAA18222.1| PUMP-1, partial [Felis catus]
          Length = 262

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 46/68 (67%)

Query: 24  RALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDA 83
           +AL++WSK   L+FR V     DI+I F +  H D YPFDGPG  LAHA+ PG G GGDA
Sbjct: 126 KALNMWSKEIPLSFRRVVLGIPDIVIGFARGAHGDFYPFDGPGGTLAHAYEPGPGLGGDA 185

Query: 84  HFDIDEDW 91
           HFD DE W
Sbjct: 186 HFDEDERW 193


>gi|444724327|gb|ELW64934.1| Collagenase 3 [Tupaia chinensis]
          Length = 497

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FRKAFKVWSDVTPLNFTRLHDGIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|426392041|ref|XP_004062370.1| PREDICTED: matrix metalloproteinase-9 [Gorilla gorilla gorilla]
          Length = 671

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD DE W     V+  +R  NAD G +       EGR +
Sbjct: 194 PGPGIQGDAHFDDDELWSLGKGVVVPTRFGNAD-GAACHFPFIFEGRSY 241


>gi|15988148|pdb|1JK3|A Chain A, Crystal Structure Of Human Mmp-12 (Macrophage Elastase) At
           True Atomic Resolution
          Length = 158

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 29  IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGG 88

Query: 82  DAHFDIDEDWMV 93
           DAHFD DE W  
Sbjct: 89  DAHFDEDEFWTT 100


>gi|397487096|ref|XP_003814646.1| PREDICTED: matrix metalloproteinase-17 [Pan paniscus]
          Length = 833

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/90 (50%), Positives = 51/90 (56%), Gaps = 7/90 (7%)

Query: 9   RVRHYDRGR------LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R        +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 370 RVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQIDFSKADHNDGYPF 429

Query: 63  DGPGKILAHAFFPGSGR-GGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 430 DGPGGTVAHAFFPGDHHTAGDTHFDDDEAW 459


>gi|194382744|dbj|BAG64542.1| unnamed protein product [Homo sapiens]
          Length = 305

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDELRRAL----DVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+R+Y       E+ RA+    ++WS  S L F  ++   ADI I F + +H D  PFDG
Sbjct: 51  RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDG 110

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           P  ILAHAF PG G GGDAHFD +E W
Sbjct: 111 PNGILAHAFQPGQGIGGDAHFDAEETW 137


>gi|6678896|ref|NP_032633.1| collagenase 3 preproprotein [Mus musculus]
 gi|461764|sp|P33435.1|MMP13_MOUSE RecName: Full=Collagenase 3; AltName: Full=Matrix
           metalloproteinase-13; Short=MMP-13; Flags: Precursor
 gi|53604|emb|CAA47102.1| procollagenase [Mus musculus]
 gi|74144340|dbj|BAE36033.1| unnamed protein product [Mus musculus]
 gi|74178022|dbj|BAE29805.1| unnamed protein product [Mus musculus]
 gi|74196011|dbj|BAE30561.1| unnamed protein product [Mus musculus]
 gi|74204845|dbj|BAE35483.1| unnamed protein product [Mus musculus]
 gi|74220177|dbj|BAE31273.1| unnamed protein product [Mus musculus]
 gi|74225324|dbj|BAE31593.1| unnamed protein product [Mus musculus]
 gi|116138461|gb|AAI25323.1| Matrix metallopeptidase 13 [Mus musculus]
 gi|116138812|gb|AAI25321.1| Matrix metallopeptidase 13 [Mus musculus]
 gi|148692985|gb|EDL24932.1| matrix metallopeptidase 13 [Mus musculus]
          Length = 472

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 44/70 (62%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  + D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 139 FRKAFKVWSDVTPLNFTRIYDGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 198

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 199 DAHFDDDETW 208


>gi|260803725|ref|XP_002596740.1| hypothetical protein BRAFLDRAFT_129804 [Branchiostoma floridae]
 gi|229281999|gb|EEN52752.1| hypothetical protein BRAFLDRAFT_129804 [Branchiostoma floridae]
          Length = 592

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/76 (53%), Positives = 49/76 (64%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           +R  + RA  VW++ + LTF EV    ADI I F +  H D +PFDG G +LAHAFFPG 
Sbjct: 169 IRYAVERAFAVWAEVAPLTFTEVWYGDADINIDFRRFYHGDNFPFDGAGGVLAHAFFPGE 228

Query: 78  GRGGDAHFDIDEDWMV 93
           G GGD HFD DE W V
Sbjct: 229 GIGGDTHFDEDEPWSV 244


>gi|431916538|gb|ELK16516.1| Matrix metalloproteinase-20 [Pteropus alecto]
          Length = 483

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/72 (51%), Positives = 42/72 (58%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  AL  WS    L F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 142 IEMALRAWSSAVPLNFVRINSGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGG 201

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 202 DTHFDNAEKWTM 213


>gi|74151942|dbj|BAE32010.1| unnamed protein product [Mus musculus]
          Length = 472

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 44/70 (62%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  + D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 139 FRKAFKVWSDVTPLNFTRIYDGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 198

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 199 DAHFDDDETW 208


>gi|344287950|ref|XP_003415714.1| PREDICTED: neutrophil collagenase [Loxodonta africana]
          Length = 471

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/79 (44%), Positives = 50/79 (63%)

Query: 13  YDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHA 72
           + +  +    R+A  +WS+ S+L+F  +++ +ADI I F ++ H D  PFDGP  ILAHA
Sbjct: 127 WTKAEVETAFRKAFALWSRASRLSFTSISEGKADIEIGFFEKEHGDNSPFDGPNGILAHA 186

Query: 73  FFPGSGRGGDAHFDIDEDW 91
           F PG   GGD HFD +E W
Sbjct: 187 FQPGQDIGGDVHFDAEETW 205


>gi|259490994|gb|ACW82491.1| karilysin protease [Tannerella forsythia]
          Length = 472

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 4/88 (4%)

Query: 12  HYDRGRLRDELRRALDVWSKHSKLTFREV-NDDRADILIYFEKENHWDGYPFDGPGKILA 70
           H       + +R A  +WS  S L+F +V N ++ADI I +EK NH DGYPFDG   ILA
Sbjct: 57  HLTTTERENAIRSAFALWSDKSTLSFIQVYNPNQADIKIKWEKGNHGDGYPFDGNTGILA 116

Query: 71  HAFFP---GSGRGGDAHFDIDEDWMVLG 95
           HAF+P   G    G  HFD DE+W + G
Sbjct: 117 HAFYPPPAGGNYAGHLHFDDDENWSING 144


>gi|21730660|pdb|1L6J|A Chain A, Crystal Structure Of Human Matrix Metalloproteinase Mmp9
           (gelatinase B)
          Length = 425

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 115 RAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 174

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD DE W     V+  +R  NAD G +       EGR +
Sbjct: 175 PGPGIQGDAHFDDDELWSLGKGVVVPTRFGNAD-GAACHFPFIFEGRSY 222


>gi|47522674|ref|NP_999070.1| matrix metalloproteinase-20 precursor [Sus scrofa]
 gi|11386893|sp|P79287.1|MMP20_PIG RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
           Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
           Flags: Precursor
 gi|1800213|gb|AAB41396.1| matrix metalloproteinase [Sus scrofa]
          Length = 483

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 43/72 (59%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  AL  WS    L+F  VN   ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 142 MEMALQAWSSAVPLSFVRVNAGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGG 201

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 202 DTHFDNAEKWTM 213


>gi|74199114|dbj|BAE33104.1| unnamed protein product [Mus musculus]
          Length = 472

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 44/70 (62%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  + D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 139 FRKAFKVWSDVTPLNFTRIYDGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 198

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 199 DAHFDDDETW 208


>gi|161761033|pdb|2POJ|A Chain A, Nmr Solution Structure Of The Inhibitor-Free State Of
           Macrophage Metalloelastase (Mmp-12)
          Length = 164

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 35  IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGG 94

Query: 82  DAHFDIDEDWMV 93
           DAHFD DE W  
Sbjct: 95  DAHFDEDEFWTT 106


>gi|149633273|ref|XP_001509903.1| PREDICTED: collagenase 3-like [Ornithorhynchus anatinus]
          Length = 471

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++AL VWS  + L F  +    ADI+I F ++ H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 IKKALKVWSNVTPLNFTRLRSGTADIMISFGRKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 198 DAHFDDDETW 207


>gi|189053704|dbj|BAG35956.1| unnamed protein product [Homo sapiens]
          Length = 707

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD DE W     V+  +R  NAD G +       EGR +
Sbjct: 194 PGPGIQGDAHFDDDELWSLGKGVVVPTRFGNAD-GAACHFPFIFEGRSY 241


>gi|188595815|pdb|2K2G|A Chain A, Solution Structure Of The Wild-Type Catalytic Domain Of
           Human Matrix Metalloproteinase 12 (Mmp-12) In Complex
           With A Tight-Binding Inhibitor
          Length = 165

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 36  IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGG 95

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 96  DAHFDEDEFW 105


>gi|54311164|gb|AAH45610.1| MMP17 protein [Homo sapiens]
          Length = 606

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/90 (51%), Positives = 51/90 (56%), Gaps = 7/90 (7%)

Query: 9   RVRHYDRGR------LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R        +R  +  AL VWS  + L F EV    ADI I F K NH DGYPF
Sbjct: 144 RVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSTADIQIDFSKANHNDGYPF 203

Query: 63  DGPGKILAHAFFPG-SGRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 204 DGPGGTVAHAFFPGHHNTAGDTHFDDDEAW 233


>gi|410971803|ref|XP_003992352.1| PREDICTED: matrilysin [Felis catus]
          Length = 267

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 46/68 (67%)

Query: 24  RALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDA 83
           +AL++WSK   L+FR V     DI+I F +  H D YPFDGPG  LAHA+ PG G GGDA
Sbjct: 131 KALNMWSKEIPLSFRRVVLGIPDIVIGFARGAHGDFYPFDGPGGTLAHAYEPGPGLGGDA 190

Query: 84  HFDIDEDW 91
           HFD DE W
Sbjct: 191 HFDEDERW 198


>gi|354467445|ref|XP_003496180.1| PREDICTED: interstitial collagenase A [Cricetulus griseus]
          Length = 464

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/80 (46%), Positives = 48/80 (60%)

Query: 12  HYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           +  R  + +   +A  VWS  + LTF  V D+  DI++ F + +H D  PFDGP   LAH
Sbjct: 121 YLSRAVVEESFEKAFQVWSSVTPLTFTRVYDEDGDIVLAFYRGDHDDNNPFDGPNYGLAH 180

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           AF PG G GGD HFD+DE W
Sbjct: 181 AFQPGPGIGGDVHFDLDERW 200


>gi|257471715|pdb|2WO8|A Chain A, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
 gi|257471716|pdb|2WO8|B Chain B, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
 gi|257471717|pdb|2WO8|C Chain C, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
 gi|257471718|pdb|2WO8|D Chain D, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
 gi|257471719|pdb|2WO9|A Chain A, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
 gi|257471720|pdb|2WO9|B Chain B, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
 gi|257471721|pdb|2WO9|C Chain C, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
 gi|257471722|pdb|2WO9|D Chain D, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
 gi|257471723|pdb|2WOA|A Chain A, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
 gi|257471724|pdb|2WOA|B Chain B, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
 gi|257471725|pdb|2WOA|C Chain C, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
 gi|257471726|pdb|2WOA|D Chain D, Mmp12 Complex With A Beta Hydroxy Carboxylic Acid
          Length = 164

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 30  IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGG 89

Query: 82  DAHFDIDEDWMV 93
           DAHFD DE W  
Sbjct: 90  DAHFDEDEFWTT 101


>gi|224510512|pdb|2W0D|A Chain A, Does A Fast Nuclear Magnetic Resonance Spectroscopy- And
           X-Ray Crystallography Hybrid Approach Provide Reliable
           Structural Information Of Ligand-Protein Complexes? A
           Case Study Of Metalloproteinases.
 gi|224510513|pdb|2W0D|B Chain B, Does A Fast Nuclear Magnetic Resonance Spectroscopy- And
           X-Ray Crystallography Hybrid Approach Provide Reliable
           Structural Information Of Ligand-Protein Complexes? A
           Case Study Of Metalloproteinases.
 gi|224510514|pdb|2W0D|C Chain C, Does A Fast Nuclear Magnetic Resonance Spectroscopy- And
           X-Ray Crystallography Hybrid Approach Provide Reliable
           Structural Information Of Ligand-Protein Complexes? A
           Case Study Of Metalloproteinases.
 gi|224510515|pdb|2W0D|D Chain D, Does A Fast Nuclear Magnetic Resonance Spectroscopy- And
           X-Ray Crystallography Hybrid Approach Provide Reliable
           Structural Information Of Ligand-Protein Complexes? A
           Case Study Of Metalloproteinases.
 gi|436408754|pdb|3UVC|A Chain A, Mmp12 In A Complex With The Dimeric Adduct:
           5-(5-Phenylhydantoin)-5- Phenylhydantoin
 gi|436408755|pdb|3UVC|B Chain B, Mmp12 In A Complex With The Dimeric Adduct:
           5-(5-Phenylhydantoin)-5- Phenylhydantoin
          Length = 164

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 30  IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGG 89

Query: 82  DAHFDIDEDWMV 93
           DAHFD DE W  
Sbjct: 90  DAHFDEDEFWTT 101


>gi|433435|emb|CAA51315.1| gelatinase b [Mus musculus]
          Length = 598

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 46/77 (59%)

Query: 15 RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
          R  + D   RA  VW + + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 2  RDMIDDAFARAFAVWGEVAPLTFTRVYGPEADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 61

Query: 75 PGSGRGGDAHFDIDEDW 91
          PG+G  GDAHFD DE W
Sbjct: 62 PGAGVQGDAHFDDDELW 78


>gi|6754714|ref|NP_034939.1| stromelysin-1 preproprotein [Mus musculus]
 gi|54872|emb|CAA44860.1| transin-1 [Mus musculus]
 gi|13879491|gb|AAH06725.1| Matrix metallopeptidase 3 [Mus musculus]
 gi|28300433|gb|AAO37583.1| matrix metalloproteinase 3 [Mus musculus]
 gi|148692988|gb|EDL24935.1| mCG9886 [Mus musculus]
          Length = 479

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +AL VW + + LTF  +++  ADI+I F    H D  
Sbjct: 115 HITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRISEGEADIMISFAVGEHGDFV 174

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG +LAHA+ PG G  GDAHFD DE W
Sbjct: 175 PFDGPGTVLAHAYAPGPGINGDAHFDDDERW 205


>gi|58176944|pdb|1UTT|A Chain A, Crystal Structure Of Mmp-12 Complexed To 2-
           (1,3-Dioxo-1,3-Dihydro-2h-Isoindol-2-Yl)ethyl-4-
           (4-Ethoxy[1,1-Biphenyl]-4-Yl)-4-Oxobutanoic Acid
 gi|58176945|pdb|1UTZ|A Chain A, Crystal Structure Of Mmp-12 Complexed To
           (2r)-3-({[4-[(Pyri
           Din-4-Yl)phenyl]-Thien-2-
           Yl}carboxamido)(Phenyl)propanoic Acid
 gi|58176946|pdb|1UTZ|B Chain B, Crystal Structure Of Mmp-12 Complexed To
           (2r)-3-({[4-[(Pyri
           Din-4-Yl)phenyl]-Thien-2-
           Yl}carboxamido)(Phenyl)propanoic Acid
          Length = 159

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 29  IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGG 88

Query: 82  DAHFDIDEDWMV 93
           DAHFD DE W  
Sbjct: 89  DAHFDEDEFWTT 100


>gi|410971813|ref|XP_003992357.1| PREDICTED: collagenase 3 [Felis catus]
          Length = 470

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++AL VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 137 FKKALKVWSDVTPLNFTRLHDGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 196

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 197 DAHFDDDETW 206


>gi|160877869|pdb|2Z2D|A Chain A, Solution Structure Of Human Macrophage Elastase (Mmp-12)
           Catalytic Domain Complexed With A Gamma-Keto Butanoic
           Acid Inhibitor
          Length = 164

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 35  IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGG 94

Query: 82  DAHFDIDEDWMV 93
           DAHFD DE W  
Sbjct: 95  DAHFDEDEFWTT 106


>gi|58176639|pdb|1ROS|A Chain A, Crystal Structure Of Mmp-12 Complexed To 2-(1,3-Dioxo-1,3-
           Dihydro-2h-Isoindol-2-Yl)ethyl-4-(4-Ethoxy[1,
           1-Biphenyl]-4- Yl)-4-Oxobutanoic Acid
 gi|58176640|pdb|1ROS|B Chain B, Crystal Structure Of Mmp-12 Complexed To 2-(1,3-Dioxo-1,3-
           Dihydro-2h-Isoindol-2-Yl)ethyl-4-(4-Ethoxy[1,
           1-Biphenyl]-4- Yl)-4-Oxobutanoic Acid
          Length = 163

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 29  IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGG 88

Query: 82  DAHFDIDEDWMV 93
           DAHFD DE W  
Sbjct: 89  DAHFDEDEFWTT 100


>gi|395814636|ref|XP_003780851.1| PREDICTED: stromelysin-1 [Otolemur garnettii]
          Length = 477

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 52/91 (57%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     RD     + RAL VW + + LTF  V +  ADI+I F    H D  
Sbjct: 113 HLTYRIVNYTPDLPRDAVDSAIERALKVWEEVTPLTFSRVYEGEADIMISFAVGEHGDFS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPGK LAHA+ PG G  GDAHFD DE W
Sbjct: 173 PFDGPGKALAHAYPPGPGIYGDAHFDDDEQW 203


>gi|461769|sp|P28862.2|MMP3_MOUSE RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=EMS-2;
           AltName: Full=Matrix metalloproteinase-3; Short=MMP-3;
           AltName: Full=Transin-1; Flags: Precursor
 gi|296168|emb|CAA47029.1| stromelysin-i [Mus musculus]
          Length = 477

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +AL VW + + LTF  +++  ADI+I F    H D  
Sbjct: 113 HITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRISEGEADIMISFAVGEHGDFV 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG +LAHA+ PG G  GDAHFD DE W
Sbjct: 173 PFDGPGTVLAHAYAPGPGINGDAHFDDDERW 203


>gi|3183022|sp|P91953.1|HE_HEMPU RecName: Full=50 kDa hatching enzyme; Short=HE; Short=HEZ; AltName:
           Full=Envelysin; AltName: Full=Sea-urchin-hatching
           proteinase; Contains: RecName: Full=38 kDa hatching
           enzyme; Contains: RecName: Full=32 kDa hatching enzyme
           non-specific; Contains: RecName: Full=15 kDa peptide;
           Flags: Precursor
 gi|1816431|dbj|BAA19171.1| hatching enzyme [Hemicentrotus pulcherrimus]
          Length = 591

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/104 (48%), Positives = 59/104 (56%), Gaps = 11/104 (10%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRA-DILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           +++ELRRA  VW   S LTFREV D  + DI I F    H DG  FDG G +LAHAF P 
Sbjct: 199 IKNELRRAFQVWDDVSSLTFREVVDSSSVDIRIKFGSYEHGDGISFDGQGGVLAHAFLP- 257

Query: 77  SGRGGDAHFDIDEDWMVLGVSRSAN-----ADE-GKSLELANAD 114
             R GDAHFD  E W + G +   N     A E G SL L ++D
Sbjct: 258 --RNGDAHFDDSERWTI-GTNSGTNLFQVAAHEFGHSLGLYHSD 298


>gi|444724334|gb|ELW64941.1| Matrix metalloproteinase-27 [Tupaia chinensis]
          Length = 954

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/76 (48%), Positives = 45/76 (59%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A  VWS  S LTF  ++   ADI I F   +H D  PFDGP  +LAHAF PG G GG
Sbjct: 136 IEKAFQVWSAASPLTFLRLSQGEADIKIAFVHRDHGDNSPFDGPNGVLAHAFQPGQGIGG 195

Query: 82  DAHFDIDEDWMVLGVS 97
           D HFD +E W    +S
Sbjct: 196 DVHFDAEETWTTSSIS 211



 Score = 69.3 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWD-GYPFDGPGKILAHAF 73
           R  + + +++AL+VWSK + LTF ++    ADI+I F    H      FDGP  +L HAF
Sbjct: 566 RADVDEAIQKALEVWSKVTPLTFTKIFKGIADIMIAFRTRVHGRCPRYFDGPLGVLGHAF 625

Query: 74  FPGSGRGGDAHFDIDEDW 91
            PG G GGD HFD DE+W
Sbjct: 626 PPGLGLGGDTHFDEDENW 643


>gi|3005946|emb|CAA73317.1| enamelysin [Homo sapiens]
          Length = 483

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 43/72 (59%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  AL  WS    L+F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 142 VEMALQAWSSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGG 201

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 202 DTHFDNPEKWTM 213


>gi|332845945|ref|XP_001167520.2| PREDICTED: 72 kDa type IV collagenase isoform 4 [Pan troglodytes]
          Length = 660

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/74 (50%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + L F  ++D  ADI+I F + +  D YPFDG   +LAHAF PG+G 
Sbjct: 142 DAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWDTGDXYPFDGKDGLLAHAFAPGTGV 201

Query: 80  GGDAHFDIDEDWMV 93
           GGD+HFD DE W +
Sbjct: 202 GGDSHFDDDELWTL 215


>gi|315585126|gb|ADU34085.1| matrix metalloproteinase 9 [Ctenopharyngodon idella]
          Length = 675

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/74 (51%), Positives = 46/74 (62%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + LTF  + D  ADI+I F + +H D YPFDG   +LAHA+ PG G 
Sbjct: 138 DAFARAFKVWSDVTPLTFTRLYDGTADIMISFGRADHGDPYPFDGKDGLLAHAYPPGQGI 197

Query: 80  GGDAHFDIDEDWMV 93
            GDAHFD DE W +
Sbjct: 198 QGDAHFDDDEYWTL 211


>gi|159162422|pdb|1HOV|A Chain A, Solution Structure Of A Catalytic Domain Of Mmp-2
           Complexed With Sc-74020
          Length = 163

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 55/102 (53%), Gaps = 8/102 (7%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 28  DPETVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAF 87

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
            PG+G GGD+HFD DE W         N     SL L  A E
Sbjct: 88  APGTGVGGDSHFDDDELW--------TNTSANYSLFLVAAHE 121


>gi|21730383|pdb|1JIZ|A Chain A, Crystal Structure Analysis Of Human Macrophage Elastase
           Mmp- 12
 gi|21730384|pdb|1JIZ|B Chain B, Crystal Structure Analysis Of Human Macrophage Elastase
           Mmp- 12
          Length = 166

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 36  IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGG 95

Query: 82  DAHFDIDEDWMV 93
           DAHFD DE W  
Sbjct: 96  DAHFDEDEFWTT 107


>gi|301773292|ref|XP_002922059.1| PREDICTED: stromelysin-1-like [Ailuropoda melanoleuca]
 gi|281341732|gb|EFB17316.1| hypothetical protein PANDA_011004 [Ailuropoda melanoleuca]
          Length = 477

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     RD     + +AL +W + + LTF + +D  ADI I F   +H D  
Sbjct: 113 HLTYRIMNYMLDLPRDAVDSAIEKALSLWEEVTPLTFSKADDGEADIKILFAVRDHGDFI 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPGK+LAHA+ PG G  GDAHFD DE W
Sbjct: 173 PFDGPGKVLAHAYPPGPGIYGDAHFDDDEPW 203


>gi|342350921|pdb|3AYU|A Chain A, Crystal Structure Of Mmp-2 Active Site Mutant In Complex
           With App- Drived Decapeptide Inhibitor
          Length = 167

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 50/80 (62%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 27  DPETVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAF 86

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG+G GGD+HFD DE W +
Sbjct: 87  APGTGVGGDSHFDDDELWTL 106


>gi|126327142|ref|XP_001366839.1| PREDICTED: macrophage metalloelastase-like [Monodelphis domestica]
          Length = 472

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     RD+    ++RA +VWS  + LTFR +    ADI+I F    H D  PFDG
Sbjct: 116 RIMNYTPDMTRDDVDYAIKRAFEVWSNVTPLTFRRIYTGEADIMISFASGVHGDFSPFDG 175

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
               LAHA+ PG G GGDAHFD DE W
Sbjct: 176 RDGTLAHAYAPGPGIGGDAHFDEDESW 202


>gi|22532481|gb|AAM97934.1| matrix metalloproteinase 9 (gelatinase B, 92kD gelatinase, 92kD
           type IV collagenase) [Homo sapiens]
 gi|74418836|gb|ABA03169.1| matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa
           type IV collagenase) [Homo sapiens]
          Length = 707

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD DE W     V+  +R  NAD G +       EGR +
Sbjct: 194 PGPGIQGDAHFDDDELWSLGKGVVVPTRFGNAD-GAACHFPFIFEGRSY 241


>gi|392351059|ref|XP_002742480.2| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-25 [Rattus
           norvegicus]
          Length = 500

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 3/77 (3%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDD--RADILIYFEKENHWDGYPFDGPGKILAHAFFP 75
           +R  +  ALDVW+  S LTF+EV+      DI+I+F +  H D YPFDGPG  LAHAFFP
Sbjct: 192 VRTLVSYALDVWAVASGLTFQEVDSQYQEPDIVIHFSRAYHQDSYPFDGPGGTLAHAFFP 251

Query: 76  GSGR-GGDAHFDIDEDW 91
           G     GD HFD +E W
Sbjct: 252 GEHPISGDTHFDDEETW 268


>gi|148233994|ref|NP_001085262.1| matrix metallopeptidase 16 (membrane-inserted) precursor [Xenopus
           laevis]
 gi|75863761|gb|AAQ76702.2| membrane-type matrix metalloproteinase 3 precursor [Xenopus laevis]
          Length = 613

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 153 RKAIRRAFDVWQNVTPLTFEEVPYCELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 212

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 213 AYFPGPGIGGDTHFDSDEPWTL 234


>gi|6573493|pdb|1QIB|A Chain A, Crystal Structure Of Gelatinase A Catalytic Domain
          Length = 161

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 56/102 (54%), Gaps = 7/102 (6%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 22  DPETVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAF 81

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
            PG+G GGD+HFD DE W       S     G SL L  A E
Sbjct: 82  APGTGVGGDSHFDDDELW-------SLGKGVGYSLFLVAAHE 116


>gi|213625068|gb|AAI69744.1| MT3-MMP protein [Xenopus laevis]
          Length = 608

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 148 RKAIRRAFDVWQNVTPLTFEEVPYCELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 207

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 208 AYFPGPGIGGDTHFDSDEPWTL 229


>gi|426244423|ref|XP_004016022.1| PREDICTED: matrix metalloproteinase-20 [Ovis aries]
          Length = 483

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 49/89 (55%), Gaps = 4/89 (4%)

Query: 9   RVRHYDRGRLRDELRRALDV----WSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+  Y       E+ RA+++    WS    L F  VN   ADI+I FE  +H D YPFDG
Sbjct: 125 RISKYTPSMTPAEVDRAMEMALRAWSSAVPLNFVRVNAGEADIMISFETGDHGDSYPFDG 184

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           P   LAHAF PG G GGD HFD  E W +
Sbjct: 185 PRGTLAHAFAPGEGLGGDTHFDNAEKWTM 213


>gi|397511464|ref|XP_003826092.1| PREDICTED: matrix metalloproteinase-9 [Pan paniscus]
          Length = 725

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 152 RAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 211

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD DE W     V+  +R  NAD G +       EGR +
Sbjct: 212 PGPGIQGDAHFDDDELWSLGKGVVVPTRFGNAD-GAACHFPFIFEGRSY 259


>gi|311263813|ref|XP_003129864.1| PREDICTED: neutrophil collagenase [Sus scrofa]
          Length = 468

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/70 (51%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL +WS+ S L F   +++ ADI I F + +H D  PFDGP  ILAHAF PG G GG
Sbjct: 136 IAKALQLWSQASPLKFISTSEEEADIKIAFVQRDHGDNSPFDGPNGILAHAFQPGPGIGG 195

Query: 82  DAHFDIDEDW 91
           D HFD +E W
Sbjct: 196 DVHFDAEETW 205


>gi|332858607|ref|XP_003317021.1| PREDICTED: matrix metalloproteinase-9 isoform 1 [Pan troglodytes]
          Length = 699

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD DE W     V+  +R  NAD G +       EGR +
Sbjct: 194 PGPGIQGDAHFDDDELWSLGKGVVVPTRFGNAD-GAACHFPFIFEGRSY 241


>gi|74272287|ref|NP_004985.2| matrix metalloproteinase-9 preproprotein [Homo sapiens]
 gi|269849668|sp|P14780.3|MMP9_HUMAN RecName: Full=Matrix metalloproteinase-9; Short=MMP-9; AltName:
           Full=92 kDa gelatinase; AltName: Full=92 kDa type IV
           collagenase; AltName: Full=Gelatinase B; Short=GELB;
           Contains: RecName: Full=67 kDa matrix
           metalloproteinase-9; Contains: RecName: Full=82 kDa
           matrix metalloproteinase-9; Flags: Precursor
          Length = 707

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD DE W     V+  +R  NAD G +       EGR +
Sbjct: 194 PGPGIQGDAHFDDDELWSLGKGVVVPTRFGNAD-GAACHFPFIFEGRSY 241


>gi|177205|gb|AAA51539.1| 92 kDa type IV collagenase [Homo sapiens]
 gi|13543893|gb|AAH06093.1| Matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa
           type IV collagenase) [Homo sapiens]
 gi|60656323|gb|AAX32725.1| matrix metalloproteinase 9 [synthetic construct]
 gi|119596182|gb|EAW75776.1| matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa
           type IV collagenase) [Homo sapiens]
 gi|124000563|gb|ABM87790.1| matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa
           type IV collagenase) [synthetic construct]
 gi|157929162|gb|ABW03866.1| matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa
           type IV collagenase) [synthetic construct]
 gi|261859970|dbj|BAI46507.1| matrix metallopeptidase 9 [synthetic construct]
          Length = 707

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD DE W     V+  +R  NAD G +       EGR +
Sbjct: 194 PGPGIQGDAHFDDDELWSLGKGVVVPTRFGNAD-GAACHFPFIFEGRSY 241


>gi|148225975|ref|NP_001079862.1| matrix metalloproteinase 13 precursor [Xenopus laevis]
 gi|33585953|gb|AAH56040.1| MGC68994 protein [Xenopus laevis]
          Length = 259

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 17  RLRDE-LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFP 75
           +L DE ++RA  VWS  + L F  ++   ADI I F    H D  PFDGP  +LAHA+ P
Sbjct: 119 QLVDEAIKRAFGVWSNVTPLQFTAISSGDADIFIRFGARAHGDSLPFDGPSGVLAHAYAP 178

Query: 76  GSGRGGDAHFDIDEDW 91
           G G GGDAHFD DE W
Sbjct: 179 GRGIGGDAHFDEDESW 194


>gi|52346000|ref|NP_001005043.1| matrix metallopeptidase 7 (matrilysin, uterine) precursor [Xenopus
           (Silurana) tropicalis]
 gi|50369210|gb|AAH76908.1| MGC89057 protein [Xenopus (Silurana) tropicalis]
 gi|224472824|gb|ACN49121.1| matrix metallopeptidase 7 [Xenopus (Silurana) tropicalis]
          Length = 259

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 45/70 (64%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           ++RA  VWS  + L F +V+   ADILI F    H D  PFDGP  +LAHA+ PG G GG
Sbjct: 127 IQRAFGVWSNVTPLQFTKVSSGDADILIRFGARTHGDSSPFDGPSGVLAHAYGPGRGIGG 186

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 187 DAHFDEDERW 196


>gi|348574169|ref|XP_003472863.1| PREDICTED: macrophage metalloelastase-like [Cavia porcellus]
          Length = 464

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 56/94 (59%), Gaps = 6/94 (6%)

Query: 4   KHH--PKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHW 57
           KHH    R+ +Y     R  + D +++A  VWS  + L FR++N   ADI+I+F    H 
Sbjct: 105 KHHFITYRINNYTPDMRRQDVDDAIQKAFQVWSDVTPLKFRKINVGEADIMIFFAYGEHG 164

Query: 58  DGYPFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           D  PFDG   +LAHAF PG GRGGDAHFD  E W
Sbjct: 165 DFNPFDGQDGVLAHAFGPGIGRGGDAHFDEAETW 198


>gi|354467451|ref|XP_003496183.1| PREDICTED: matrix metalloproteinase-20 [Cricetulus griseus]
          Length = 482

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/69 (53%), Positives = 41/69 (59%)

Query: 25  ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
           AL  WS    L F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GGD H
Sbjct: 144 ALRAWSTAVPLNFVRINSGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTH 203

Query: 85  FDIDEDWMV 93
           FD  E W +
Sbjct: 204 FDNAEKWTM 212


>gi|73955232|ref|XP_854639.1| PREDICTED: matrix metalloproteinase-20 [Canis lupus familiaris]
          Length = 483

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/69 (53%), Positives = 41/69 (59%)

Query: 25  ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
           AL  W     L+F  VN   ADI+I FE  +H D YPFDGP   LAHAF PG G GGD H
Sbjct: 145 ALQAWGSAVPLSFIRVNSGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTH 204

Query: 85  FDIDEDWMV 93
           FD  E W +
Sbjct: 205 FDNAEKWTM 213


>gi|221042132|dbj|BAH12743.1| unnamed protein product [Homo sapiens]
          Length = 648

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 75  RAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 134

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD DE W     V+  +R  NAD G +       EGR +
Sbjct: 135 PGPGIQGDAHFDDDELWSLGKGVVVPTRFGNAD-GAACHFPFIFEGRSY 182


>gi|395520436|ref|XP_003764336.1| PREDICTED: neutrophil collagenase [Sarcophilus harrisii]
          Length = 502

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/70 (51%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A+++WS  + L F   N++ ADI I F + +H D  PFDG G ILAHAF PG G GG
Sbjct: 168 IEKAINIWSDPTPLKFSRKNNNEADIKISFVRGDHGDNSPFDGEGGILAHAFQPGQGIGG 227

Query: 82  DAHFDIDEDW 91
           D HFD DE W
Sbjct: 228 DVHFDEDETW 237


>gi|440912885|gb|ELR62410.1| Collagenase 3 [Bos grunniens mutus]
          Length = 469

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  +++  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FRKAFKVWSDVTPLNFTRIHNGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|45359865|ref|NP_004762.2| matrix metalloproteinase-20 preproprotein [Homo sapiens]
 gi|322510116|sp|O60882.3|MMP20_HUMAN RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
           Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
           Flags: Precursor
 gi|157170228|gb|AAI52742.1| Matrix metallopeptidase 20 [synthetic construct]
 gi|261857992|dbj|BAI45518.1| matrix metallopeptidase 20 [synthetic construct]
          Length = 483

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 43/72 (59%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  AL  WS    L+F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 142 VEMALQAWSSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGG 201

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 202 DTHFDNAEKWTM 213


>gi|426370246|ref|XP_004052079.1| PREDICTED: matrix metalloproteinase-20 [Gorilla gorilla gorilla]
          Length = 483

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 43/72 (59%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  AL  WS    L+F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 142 VEMALQAWSSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGG 201

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 202 DTHFDNAEKWTM 213


>gi|390341933|ref|XP_791616.2| PREDICTED: matrix metalloproteinase-24-like [Strongylocentrotus
           purpuratus]
          Length = 573

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/68 (52%), Positives = 43/68 (63%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           L  A  VW   ++L F      +ADI++ F + NH DGY FDGPG  LAHA+FPG G GG
Sbjct: 192 LTTAFQVWGDVARLDFNPTRFPKADIIVQFARGNHGDGYAFDGPGGTLAHAYFPGDGIGG 251

Query: 82  DAHFDIDE 89
           D HFD DE
Sbjct: 252 DVHFDEDE 259


>gi|27805999|ref|NP_776814.1| collagenase 3 precursor [Bos taurus]
 gi|8469207|sp|O77656.1|MMP13_BOVIN RecName: Full=Collagenase 3; AltName: Full=Matrix
           metalloproteinase-13; Short=MMP-13; Flags: Precursor
 gi|3264824|gb|AAC24596.1| matrix metalloproteinase 13 [Bos taurus]
          Length = 471

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  +++  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FRKAFKVWSDVTPLNFTRIHNGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|397516424|ref|XP_003828430.1| PREDICTED: matrix metalloproteinase-20 [Pan paniscus]
          Length = 483

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 43/72 (59%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  AL  WS    L+F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 142 VEMALQAWSSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGG 201

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 202 DTHFDNAEKWTM 213


>gi|47228755|emb|CAG07487.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 410

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/80 (50%), Positives = 48/80 (60%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + LTF  + D  ADI+I F K +H D YPFDG   +LAHA+
Sbjct: 97  DSSVIDDAFARAFKVWSDVTPLTFTRLFDGTADIMISFGKADHGDFYPFDGKDGLLAHAY 156

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG G  GDAHFD DE W +
Sbjct: 157 PPGEGVQGDAHFDDDEYWTL 176


>gi|449484249|ref|XP_002198018.2| PREDICTED: stromelysin-2-like [Taeniopygia guttata]
          Length = 485

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/74 (51%), Positives = 47/74 (63%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           + + + RA  +WS  + L F  V   +ADI+I F    H D Y FDGPG  LAHA+ PGS
Sbjct: 130 VEEAIARAFQLWSSVTPLRFTRVYGGQADIMISFAARFHGDFYSFDGPGGTLAHAYPPGS 189

Query: 78  GRGGDAHFDIDEDW 91
           G GGDAHFD DE+W
Sbjct: 190 GIGGDAHFDEDENW 203


>gi|405972810|gb|EKC37558.1| Matrix metalloproteinase-19 [Crassostrea gigas]
          Length = 509

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/86 (51%), Positives = 54/86 (62%), Gaps = 6/86 (6%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYP--FDGP 65
           K  R  D+ + R E+ RAL  WS  + LTFREV  + +DI I FE  NH DG    FDG 
Sbjct: 122 KYTRQLDQSKTRREIIRALRHWSDVTPLTFREVAGE-SDITISFETRNHGDGVSNSFDGR 180

Query: 66  GKILAHAFFPGSGRGGDAHFDIDEDW 91
           G++LAHAFFP +   GD HFD DE+W
Sbjct: 181 GRVLAHAFFPSN---GDVHFDDDENW 203


>gi|297690058|ref|XP_002822444.1| PREDICTED: matrix metalloproteinase-20 [Pongo abelii]
          Length = 483

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 43/72 (59%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  AL  WS    L+F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 142 VEMALQAWSSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGG 201

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 202 DTHFDNAEKWTM 213


>gi|160877666|pdb|2JSD|A Chain A, Solution Structure Of Mmp20 Complexed With Nngh
          Length = 160

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 43/72 (59%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  AL  WS    L+F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 30  VEMALQAWSSAVPLSFVRINSGEADIMISFENGDHGDSYPFDGPRGTLAHAFAPGEGLGG 89

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 90  DTHFDNAEKWTM 101


>gi|27806003|ref|NP_776816.1| matrix metalloproteinase-20 precursor [Bos taurus]
 gi|12585267|sp|O18767.1|MMP20_BOVIN RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
           Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
           Flags: Precursor
 gi|2326212|gb|AAB66599.1| enamel metalloproteinase precursor [Bos taurus]
          Length = 481

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 49/89 (55%), Gaps = 4/89 (4%)

Query: 9   RVRHYDRGRLRDELRRALDV----WSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+  Y       E+ RA+++    WS    L F  +N   ADI+I FE  +H D YPFDG
Sbjct: 123 RISKYTPSMTPAEVDRAMEMALRAWSSAVPLNFVRINAGEADIMISFETGDHGDSYPFDG 182

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           P   LAHAF PG G GGD HFD  E W +
Sbjct: 183 PRGTLAHAFAPGEGLGGDTHFDNAEKWTM 211


>gi|296480356|tpg|DAA22471.1| TPA: matrix metalloproteinase-20 precursor [Bos taurus]
          Length = 481

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 49/89 (55%), Gaps = 4/89 (4%)

Query: 9   RVRHYDRGRLRDELRRALDV----WSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+  Y       E+ RA+++    WS    L F  +N   ADI+I FE  +H D YPFDG
Sbjct: 123 RISKYTPSMTPAEVDRAMEMALRAWSSAVPLNFVRINAGEADIMISFETGDHGDSYPFDG 182

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           P   LAHAF PG G GGD HFD  E W +
Sbjct: 183 PRGTLAHAFAPGEGLGGDTHFDNAEKWTM 211


>gi|281341733|gb|EFB17317.1| hypothetical protein PANDA_011005 [Ailuropoda melanoleuca]
          Length = 442

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  S LTF ++ + +ADI+I F   +H+D  
Sbjct: 79  HLTYRIENYTPDLPRADVDSAMEKAFRLWSNVSPLTFTKIFEGQADIMISFVWGDHYDNS 138

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGP   LAHAF PG   GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 139 PFDGPNGNLAHAFPPGPNLGGDAHFDEDETWTNDYRNYNLYRVAAHELGHSLGLSHSTD 197


>gi|390341931|ref|XP_791600.3| PREDICTED: matrix metalloproteinase-9-like [Strongylocentrotus
           purpuratus]
          Length = 580

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 5/98 (5%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           L  +  VWS  + L F++    RADIL+ F + NH DGY FDG G  LAHA+FPG G GG
Sbjct: 198 LVTSFQVWSDVAMLEFQQTKFPRADILVQFARGNHGDGYAFDGQGGTLAHAYFPGDGIGG 257

Query: 82  DAHFDIDE---DWMVLGVSR--SANADEGKSLELANAD 114
           D HFD DE   D  + G +    A  + G SL LA++D
Sbjct: 258 DVHFDEDESFTDETMRGTNLFIVAAHEIGHSLGLAHSD 295


>gi|440902966|gb|ELR53690.1| Matrix metalloproteinase-20 [Bos grunniens mutus]
          Length = 483

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 49/89 (55%), Gaps = 4/89 (4%)

Query: 9   RVRHYDRGRLRDELRRALDV----WSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+  Y       E+ RA+++    WS    L F  +N   ADI+I FE  +H D YPFDG
Sbjct: 125 RISKYTPSMTPAEVDRAMEMALRAWSSAVPLNFVRINAGEADIMISFETGDHGDSYPFDG 184

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           P   LAHAF PG G GGD HFD  E W +
Sbjct: 185 PRGTLAHAFAPGEGLGGDTHFDNAEKWTM 213


>gi|45383954|ref|NP_990528.1| matrix metalloproteinase-16 [Gallus gallus]
 gi|1519365|gb|AAB07491.1| membrane type-matrix metalloproteinase [Gallus gallus]
          Length = 608

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|296480370|tpg|DAA22485.1| TPA: collagenase 3 precursor [Bos taurus]
          Length = 471

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  +++  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FRKAFKVWSDVTPLNFTRIHNGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|344239428|gb|EGV95531.1| Stromelysin-2 [Cricetulus griseus]
          Length = 966

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/99 (45%), Positives = 59/99 (59%), Gaps = 6/99 (6%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF   ++  ADI+I F    H D YPFDGPG+ LAHA+ PG G  G
Sbjct: 469 IEKALKVWEEVTPLTFSRRSEGEADIMISFAAGEHGDFYPFDGPGQSLAHAYPPGPGFYG 528

Query: 82  DAHFDIDEDWMVLGVSRS-----ANADEGKSLELANADE 115
           D HFD DE W  LG S +     A  + G SL L ++D+
Sbjct: 529 DVHFDDDEKW-TLGPSGTNLFLVAAHELGHSLGLFHSDK 566



 Score = 57.0 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/36 (66%), Positives = 25/36 (69%)

Query: 56  HWDGYPFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           H D  PFDGP  ILAHAF PG G GGD HFD +E W
Sbjct: 755 HGDNSPFDGPNGILAHAFQPGQGIGGDTHFDSEETW 790


>gi|261244992|ref|NP_001159651.1| collagenase 3 precursor [Ovis aries]
 gi|256665393|gb|ACV04842.1| matrix metallopeptidase 13 [Ovis aries]
          Length = 471

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  +++  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FRKAFKVWSDVTPLNFTRIHNGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|301610873|ref|XP_002934969.1| PREDICTED: matrix metalloproteinase-18-like isoform 1 [Xenopus
           (Silurana) tropicalis]
          Length = 459

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 50/87 (57%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     RDE+ RA++    VWS    LTF  + D  +DI + F   +H D +PFDG
Sbjct: 111 RILNYTSHMTRDEVDRAIEKAFKVWSDVVPLTFTRIYDRVSDIEMSFASGDHKDAFPFDG 170

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           P  ILAH F PG   GGD HFD DE W
Sbjct: 171 PAGILAHTFAPGDNTGGDVHFDADETW 197


>gi|291388244|ref|XP_002710723.1| PREDICTED: matrix metalloproteinase 16 [Oryctolagus cuniculus]
          Length = 607

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|348513885|ref|XP_003444471.1| PREDICTED: matrix metalloproteinase-17-like [Oreochromis niloticus]
          Length = 610

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 51/90 (56%), Gaps = 1/90 (1%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           ++  PK      R  +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 150 VRTFPKDSALLGRDTVRALMYYALKVWSDIAPLNFHEVAGSNADIQIDFTKADHNDGYPF 209

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 210 DGPGGTVAHAFFPGERFTAGDTHFDDDEAW 239


>gi|115700136|ref|XP_001176086.1| PREDICTED: 50 kDa hatching enzyme-like [Strongylocentrotus
           purpuratus]
          Length = 595

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/107 (43%), Positives = 60/107 (56%), Gaps = 9/107 (8%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRA-DILIYFEKENHWDGYPFDGPGKILAHA 72
           ++  +++ELRRA  VW   S LTFREV D  + DI I F    H DG  FDG G +LAHA
Sbjct: 195 NQNAIKNELRRAFQVWVDVSGLTFREVVDSSSVDIRIKFGSYEHGDGISFDGQGGVLAHA 254

Query: 73  FFPGSGRGGDAHFDIDEDWMV-----LGVSRSANADEGKSLELANAD 114
           F P   R GDAHFD  E W +       + + A  + G SL L ++D
Sbjct: 255 FLP---RNGDAHFDDSESWTIGTNFGTNLFQVAAHEFGHSLGLYHSD 298


>gi|4140010|pdb|1UEA|A Chain A, Mmp-3TIMP-1 Complex
 gi|4140012|pdb|1UEA|C Chain C, Mmp-3TIMP-1 Complex
          Length = 173

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/71 (52%), Positives = 45/71 (63%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF  + +  ADI I F    H D YPFDGPG +LAHA+ PG G  G
Sbjct: 35  VEKALKVWEEVTPLTFSRLYEGEADIXISFAVREHGDFYPFDGPGNVLAHAYAPGPGING 94

Query: 82  DAHFDIDEDWM 92
           DAHFD DE W 
Sbjct: 95  DAHFDDDEQWT 105


>gi|4835885|gb|AAD30283.1| MMP-2 protein [Bos taurus]
          Length = 153

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 49/80 (61%)

Query: 14 DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
          D   + D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 16 DPQTVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAF 75

Query: 74 FPGSGRGGDAHFDIDEDWMV 93
           PG G GGD+HFD DE W +
Sbjct: 76 APGPGVGGDSHFDDDELWTL 95


>gi|348588576|ref|XP_003480041.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-16-like
           [Cavia porcellus]
          Length = 608

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|410971829|ref|XP_003992365.1| PREDICTED: interstitial collagenase-like [Felis catus]
          Length = 471

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 66/113 (58%), Gaps = 8/113 (7%)

Query: 9   RVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     R E+ RA++    +WS  S LTF +V++ +ADI++ F   +H+D  PFDG
Sbjct: 119 RIENYTPDLPRAEVDRAIEKAFQLWSDVSPLTFTKVSEGQADIMLSFVWGDHYDNSPFDG 178

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV----LGVSRSANADEGKSLELANA 113
           PG  LAHAF PG   GGD HFD DE W        + R A  + G SL L+++
Sbjct: 179 PGGNLAHAFQPGPNLGGDVHFDEDERWTNDFRDFNLYRVAAHELGHSLGLSHS 231


>gi|14030785|ref|NP_114395.1| interstitial collagenase A precursor [Mus musculus]
 gi|78099009|sp|Q9EPL5.1|MMP1A_MOUSE RecName: Full=Interstitial collagenase A; AltName: Full=Matrix
           metalloproteinase-1a; Short=MMP-1a; AltName:
           Full=Mcol-A; Flags: Precursor
 gi|11877304|emb|CAC18880.1| putative matrix metalloproteinase [Mus musculus]
 gi|26340288|dbj|BAC33807.1| unnamed protein product [Mus musculus]
 gi|28300432|gb|AAO37582.1| collagenase-like A [Mus musculus]
 gi|109734590|gb|AAI17757.1| Matrix metallopeptidase 1a (interstitial collagenase) [Mus
           musculus]
          Length = 464

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/74 (47%), Positives = 47/74 (63%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           + D + RA  VWS  + LTF+ V ++  DI++ F + +H D  PFDGP   LAH F PG 
Sbjct: 127 VEDAIARAFRVWSDVTPLTFQRVFEEEGDIVLSFHRGDHGDNNPFDGPNYKLAHTFQPGP 186

Query: 78  GRGGDAHFDIDEDW 91
           G GGD H+D+DE W
Sbjct: 187 GLGGDVHYDLDETW 200


>gi|350416882|ref|XP_003491150.1| PREDICTED: matrix metalloproteinase-14-like [Bombus impatiens]
          Length = 595

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 7/112 (6%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           K  R+  + ++ DEL +A  VWS+++ L F +    +  I I FEK  H DG PFDGPG 
Sbjct: 134 KYPRNLPQHKVDDELNKAFKVWSEYTDLVFIQKKSGQVHIEIRFEKGEHGDGDPFDGPGG 193

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDWMV-----LGVSRSANADEGKSLELANAD 114
            LAHA+FP    GGDAHFD  E W +       + + A  + G SL L+++D
Sbjct: 194 TLAHAYFP--VYGGDAHFDDAEQWTIDSFRGTNLFQVAAHEFGHSLGLSHSD 243


>gi|355564892|gb|EHH21381.1| Matrix metalloproteinase-26 [Macaca mulatta]
          Length = 261

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 8/98 (8%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           ++D +  A+ +WS  + L F++V ++ ADI I F +  H DG+PFDGPG IL HAF P S
Sbjct: 120 VKDSIYNAVSIWSNVTPLIFQQVQNEDADIKISFWQWAHEDGWPFDGPGGILGHAFLPNS 179

Query: 78  GRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           G  G  HFD +E W        + ++ G +L L    E
Sbjct: 180 GNPGVVHFDKNEHW--------STSNTGYNLFLVATHE 209


>gi|449484253|ref|XP_002198044.2| PREDICTED: interstitial collagenase [Taeniopygia guttata]
          Length = 400

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/77 (50%), Positives = 49/77 (63%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + + +RRAL VWS  + LTF++V  + ADI+I F   +H D  PFDGP   LAHAF 
Sbjct: 61  RADVDEAVRRALSVWSNVTPLTFQKVEGEIADIMISFAYRDHRDNSPFDGPNGQLAHAFQ 120

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G GGD H D +E W
Sbjct: 121 PGEGLGGDVHMDEEEAW 137


>gi|395743149|ref|XP_002822184.2| PREDICTED: matrix metalloproteinase-26-like [Pongo abelii]
          Length = 261

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 8/98 (8%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           ++D +  A+ +WS  + L F++V ++ ADI I F +  H DG+PFDGPG IL HAF P S
Sbjct: 120 VKDSIYNAVSIWSNVTPLIFQQVQNEDADIKISFWQWAHEDGWPFDGPGGILGHAFLPNS 179

Query: 78  GRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           G  G  HFD +E W        + +D G +L L    E
Sbjct: 180 GNPGVVHFDKNEHW--------SASDTGYNLFLVATHE 209


>gi|62858237|ref|NP_001015992.1| matrix metallopeptidase 16 precursor [Xenopus (Silurana)
           tropicalis]
 gi|89271306|emb|CAJ82988.1| matrix metalloproteinase 16 (membrane-inserted) [Xenopus (Silurana)
           tropicalis]
          Length = 607

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 147 RKAIRRAFDVWQNVTPLTFEEVPYCELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 206

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 207 AYFPGPGIGGDTHFDSDEPWTL 228


>gi|351709962|gb|EHB12881.1| Matrilysin [Heterocephalus glaber]
          Length = 265

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/77 (51%), Positives = 49/77 (63%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++ + + +AL +WSK   L+FR +    ADI I F +  H D  PFDGPG ILAHAF 
Sbjct: 122 RIKVDEIVAKALSLWSKEIPLSFRRIRFGTADIEIGFARGAHGDFNPFDGPGNILAHAFP 181

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G GGD HFD DE W
Sbjct: 182 PGPGLGGDVHFDKDEYW 198


>gi|355747706|gb|EHH52203.1| Matrix metalloproteinase-26 [Macaca fascicularis]
          Length = 261

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 8/98 (8%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           ++D +  A+ +WS  + L F++V ++ ADI I F +  H DG+PFDGPG IL HAF P S
Sbjct: 120 VKDSIYNAVSIWSNVTPLIFQQVQNEDADIKISFWQWAHEDGWPFDGPGGILGHAFLPNS 179

Query: 78  GRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           G  G  HFD +E W        + ++ G +L L    E
Sbjct: 180 GNPGVVHFDKNEHW--------STSNTGYNLFLVATHE 209


>gi|301610875|ref|XP_002934970.1| PREDICTED: matrix metalloproteinase-18-like isoform 2 [Xenopus
           (Silurana) tropicalis]
          Length = 459

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 50/87 (57%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     RDE+ RA++    VWS    LTF  + D  +DI + F   +H D +PFDG
Sbjct: 111 RILNYTSHMTRDEVDRAIEKAFKVWSDVVPLTFTRIYDRVSDIEMSFASGDHKDAFPFDG 170

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           P  ILAH F PG   GGD HFD DE W
Sbjct: 171 PSGILAHTFAPGDNTGGDVHFDADETW 197


>gi|281183314|ref|NP_001162305.1| matrix metalloproteinase-26 precursor [Papio anubis]
 gi|160904139|gb|ABX52125.1| matrix metallopeptidase 26 (predicted) [Papio anubis]
          Length = 261

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 48/74 (64%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           ++D +  A+ +WS  + L F++V ++ ADI I F +  H DG+PFDGPG IL HAF P S
Sbjct: 120 VKDSIYNAVSIWSNVTPLIFQQVQNEDADIKISFWQWAHEDGWPFDGPGGILGHAFLPNS 179

Query: 78  GRGGDAHFDIDEDW 91
           G  G  HFD +E W
Sbjct: 180 GNPGVVHFDKNEHW 193


>gi|103484506|dbj|BAE94745.1| membrane type-matrix metalloproteinase 16 [Gallus gallus]
          Length = 609

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|410987432|ref|XP_004000005.1| PREDICTED: matrix metalloproteinase-16 [Felis catus]
          Length = 607

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|301767356|ref|XP_002919098.1| PREDICTED: matrix metalloproteinase-16-like [Ailuropoda
           melanoleuca]
          Length = 607

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|296226868|ref|XP_002759098.1| PREDICTED: matrix metalloproteinase-16 [Callithrix jacchus]
 gi|403299566|ref|XP_003940554.1| PREDICTED: matrix metalloproteinase-16 [Saimiri boliviensis
           boliviensis]
          Length = 607

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|194037087|ref|XP_001926652.1| PREDICTED: matrix metalloproteinase-16 [Sus scrofa]
          Length = 607

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|33324363|gb|AAQ07962.1| matrix metalloproteinase 13 [Danio rerio]
          Length = 475

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/70 (52%), Positives = 44/70 (62%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D + +AL VW+  + L F  +    ADI+I F   +H DGYPFDGP   LAHAF P  G 
Sbjct: 135 DSISKALKVWADVTPLRFTRIYSGTADIMISFATGDHRDGYPFDGPNGFLAHAFPPFEGI 194

Query: 80  GGDAHFDIDE 89
           GGDAHFD DE
Sbjct: 195 GGDAHFDDDE 204


>gi|13027802|ref|NP_005932.2| matrix metalloproteinase-16 precursor [Homo sapiens]
 gi|109086884|ref|XP_001084206.1| PREDICTED: matrix metalloproteinase-16-like isoform 2 [Macaca
           mulatta]
 gi|114620829|ref|XP_001136497.1| PREDICTED: matrix metalloproteinase-16 isoform 2 [Pan troglodytes]
 gi|397501016|ref|XP_003821197.1| PREDICTED: matrix metalloproteinase-16 [Pan paniscus]
 gi|426360122|ref|XP_004047299.1| PREDICTED: matrix metalloproteinase-16 [Gorilla gorilla gorilla]
 gi|3041669|sp|P51512.2|MMP16_HUMAN RecName: Full=Matrix metalloproteinase-16; Short=MMP-16; AltName:
           Full=MMP-X2; AltName: Full=Membrane-type matrix
           metalloproteinase 3; Short=MT-MMP 3; Short=MTMMP3;
           AltName: Full=Membrane-type-3 matrix metalloproteinase;
           Short=MT3-MMP; Short=MT3MMP; Flags: Precursor
 gi|1209008|dbj|BAA12022.1| metalloproteinase [Homo sapiens]
 gi|2424979|dbj|BAA22226.1| MT3-MMP [Homo sapiens]
 gi|46854871|gb|AAH69500.1| Matrix metallopeptidase 16 (membrane-inserted) [Homo sapiens]
 gi|50959771|gb|AAH75004.1| Matrix metallopeptidase 16 (membrane-inserted) [Homo sapiens]
 gi|50960189|gb|AAH75005.1| Matrix metallopeptidase 16 (membrane-inserted) [Homo sapiens]
 gi|62511905|gb|AAX84515.1| matrix metalloproteinase 16 (membrane-inserted) [Homo sapiens]
 gi|119612057|gb|EAW91651.1| matrix metallopeptidase 16 (membrane-inserted), isoform CRA_a [Homo
           sapiens]
 gi|189067224|dbj|BAG36934.1| unnamed protein product [Homo sapiens]
 gi|355779808|gb|EHH64284.1| Matrix metalloproteinase-16 [Macaca fascicularis]
 gi|410211162|gb|JAA02800.1| matrix metallopeptidase 16 (membrane-inserted) [Pan troglodytes]
          Length = 607

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|345793184|ref|XP_544165.3| PREDICTED: matrix metalloproteinase-16 [Canis lupus familiaris]
          Length = 607

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|410251658|gb|JAA13796.1| matrix metallopeptidase 16 (membrane-inserted) [Pan troglodytes]
 gi|410332179|gb|JAA35036.1| matrix metallopeptidase 16 (membrane-inserted) [Pan troglodytes]
          Length = 607

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|349803603|gb|AEQ17274.1| hypothetical protein [Pipa carvalhoi]
          Length = 171

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 48/77 (62%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + + ++ A  VWS  + LTF  V +  ADI+I F    H D  PFDGP  +LAHA+ 
Sbjct: 35  RQVVDEAIQMAFKVWSDVTPLTFSRVPNGPADIIIQFSSRTHGDQSPFDGPSGVLAHAYA 94

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG+G GGDAHFD DE W
Sbjct: 95  PGNGIGGDAHFDEDERW 111


>gi|326917841|ref|XP_003205203.1| PREDICTED: matrix metalloproteinase-16-like [Meleagris gallopavo]
          Length = 609

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|224046469|ref|XP_002199883.1| PREDICTED: matrix metalloproteinase-16 [Taeniopygia guttata]
          Length = 609

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|395818250|ref|XP_003782548.1| PREDICTED: matrix metalloproteinase-16 [Otolemur garnettii]
          Length = 607

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|345312766|ref|XP_001510529.2| PREDICTED: matrix metalloproteinase-17-like, partial
           [Ornithorhynchus anatinus]
          Length = 354

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/92 (48%), Positives = 51/92 (55%), Gaps = 7/92 (7%)

Query: 8   KRVRHYDR------GRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYP 61
            RVR + R        +R  +  AL VWS  + L F EV    ADI I F K +H DGYP
Sbjct: 43  TRVRTFPRESQLGHDTVRALMYYALKVWSDITPLNFHEVAGSHADIQIDFSKADHSDGYP 102

Query: 62  FDGPGKILAHAFFPGS-GRGGDAHFDIDEDWM 92
           FDGPG  +AHAFFPG     GD HFD DE W 
Sbjct: 103 FDGPGGTVAHAFFPGDHHTAGDTHFDDDESWT 134


>gi|332238258|ref|XP_003268322.1| PREDICTED: matrix metalloproteinase-16 [Nomascus leucogenys]
          Length = 607

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|444724333|gb|ELW64940.1| Interstitial collagenase [Tupaia chinensis]
          Length = 466

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 49/70 (70%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A D+WSK + LTF +V++  ADIL+ F + +H D  PF+GPG  LAHAF PG+G GG
Sbjct: 135 IEKAFDLWSKATVLTFTKVHEGEADILLSFLRGDHHDNSPFNGPGGQLAHAFQPGAGLGG 194

Query: 82  DAHFDIDEDW 91
           D H D DE W
Sbjct: 195 DVHLDEDETW 204


>gi|2662306|dbj|BAA23742.1| membrane-type matrix metalloproteinase 3 [Homo sapiens]
          Length = 607

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|354494833|ref|XP_003509539.1| PREDICTED: matrix metalloproteinase-17-like [Cricetulus griseus]
          Length = 622

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/90 (52%), Positives = 54/90 (60%), Gaps = 7/90 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV  + ADI I F K +H DGYPF
Sbjct: 175 RVRTFPRDSPLGRDTVRALMYYALKVWSDITPLNFHEVAGNTADIQIDFSKADHNDGYPF 234

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 235 DGPGGTVAHAFFPGDHHTAGDTHFDDDEAW 264


>gi|348546287|ref|XP_003460610.1| PREDICTED: collagenase 3-like, partial [Oreochromis niloticus]
          Length = 308

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 48/72 (66%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D + +AL VW+K + L F  +    ADI+I F +  H D YPFDGP ++LAHAF PG G 
Sbjct: 91  DSIYKALQVWAKVTPLRFTRLYSGIADIMISFGRWEHGDYYPFDGPNEVLAHAFPPGPGI 150

Query: 80  GGDAHFDIDEDW 91
           GGDAHFD DE +
Sbjct: 151 GGDAHFDEDETF 162


>gi|344273229|ref|XP_003408426.1| PREDICTED: matrix metalloproteinase-16 [Loxodonta africana]
          Length = 607

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|300797815|ref|NP_001179551.1| matrix metalloproteinase-16 [Bos taurus]
 gi|296480445|tpg|DAA22560.1| TPA: matrix metallopeptidase 16 (membrane-inserted) [Bos taurus]
          Length = 607

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|149721274|ref|XP_001487888.1| PREDICTED: matrix metalloproteinase-16 [Equus caballus]
          Length = 607

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSDLENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|351709963|gb|EHB12882.1| Matrix metalloproteinase-20 [Heterocephalus glaber]
          Length = 483

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 43/72 (59%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           ++ AL  WS    L F  +N   ADI++ FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 142 IQMALQAWSSAVPLNFVRINSGEADIMVSFETGDHGDSYPFDGPRGTLAHAFAPGEGLGG 201

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 202 DTHFDNAEKWTL 213


>gi|347970929|ref|XP_554330.4| AGAP003929-PA [Anopheles gambiae str. PEST]
 gi|333469553|gb|EAL39361.4| AGAP003929-PA [Anopheles gambiae str. PEST]
          Length = 682

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 2/72 (2%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFP--GSGR 79
           + +A   WSK+SKL F  V D  ADI++ F   +H D YPFDGPG +LAHAF+P   +  
Sbjct: 140 MAKAFGEWSKYSKLRFVRVYDPSADIIVGFGSGHHGDNYPFDGPGNVLAHAFYPYEMNAY 199

Query: 80  GGDAHFDIDEDW 91
           GGD HFD DE+W
Sbjct: 200 GGDVHFDEDENW 211


>gi|301773300|ref|XP_002922062.1| PREDICTED: collagenase 3-like [Ailuropoda melanoleuca]
          Length = 470

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  +++  ADI+I F  ++H D YPFDGP  +LAHAF PG   GG
Sbjct: 137 FRKAFKVWSDVTPLNFTRLHEGTADIMISFGTKDHGDFYPFDGPSGLLAHAFPPGPNYGG 196

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 197 DAHFDDDETW--------TSSSKGYNLFLVAAHE 222


>gi|194709131|pdb|3BA0|A Chain A, Crystal Structure Of Full-Length Human Mmp-12
          Length = 365

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+A  VWS  + L F ++N   ADIL+ F +  H D + FDG G ILAHAF PGSG GG
Sbjct: 29  IRKAFQVWSNVTPLKFSKINTGMADILVVFARGAHGDDHAFDGKGGILAHAFGPGSGIGG 88

Query: 82  DAHFDIDEDWMV 93
           DAHFD DE W  
Sbjct: 89  DAHFDEDEFWTT 100


>gi|426367111|ref|XP_004050579.1| PREDICTED: matrix metalloproteinase-26 [Gorilla gorilla gorilla]
          Length = 261

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 8/98 (8%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           ++D +  A+ +WS  + L F++V ++ ADI I F +  H DG+PFDGPG IL HAF P S
Sbjct: 120 VKDSIYNAVSIWSNVTPLIFQQVQNEDADIKISFWQWAHEDGWPFDGPGGILGHAFLPNS 179

Query: 78  GRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           G  G  HFD +E W        + +D G +L L    E
Sbjct: 180 GNPGVVHFDKNEHW--------SASDTGYNLFLVATHE 209


>gi|301773294|ref|XP_002922060.1| PREDICTED: LOW QUALITY PROTEIN: interstitial collagenase-like
           [Ailuropoda melanoleuca]
          Length = 469

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  S LTF ++ + +ADI+I F   +H+D  
Sbjct: 113 HLTYRIENYTPDLPRADVDSAMEKAFRLWSNVSPLTFTKIFEGQADIMISFVWGDHYDNS 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGP   LAHAF PG   GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 173 PFDGPNGNLAHAFPPGPNLGGDAHFDEDETWTNDYRNYNLYRVAAHELGHSLGLSHSTD 231


>gi|291383997|ref|XP_002708619.1| PREDICTED: matrilysin-like [Oryctolagus cuniculus]
          Length = 273

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 51/86 (59%)

Query: 6   HPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGP 65
           +P   ++    R+   + +A ++WSK   L F+ +    ADI+I F +  H D  PFDGP
Sbjct: 119 YPFPTQNLSPVRVDQIVAKAFNLWSKEIPLHFKRLRLGIADIMIGFARGAHGDASPFDGP 178

Query: 66  GKILAHAFFPGSGRGGDAHFDIDEDW 91
           G  LAHAF PG G GGDAHFD DE W
Sbjct: 179 GNTLAHAFPPGPGLGGDAHFDKDEHW 204


>gi|148668674|gb|EDL00990.1| matrix metallopeptidase 1a (interstitial collagenase) [Mus
           musculus]
          Length = 421

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/74 (47%), Positives = 47/74 (63%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           + D + RA  VWS  + LTF+ V ++  DI++ F + +H D  PFDGP   LAH F PG 
Sbjct: 84  VEDAIARAFRVWSDVTPLTFQRVFEEEGDIVLSFHRGDHGDNNPFDGPNYKLAHTFQPGP 143

Query: 78  GRGGDAHFDIDEDW 91
           G GGD H+D+DE W
Sbjct: 144 GLGGDVHYDLDETW 157


>gi|301773296|ref|XP_002922061.1| PREDICTED: stromelysin-1-like [Ailuropoda melanoleuca]
          Length = 476

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     RD     + +AL +W + + LTF + +D  ADI I F   +H D  
Sbjct: 112 HLTYRIMNYMLDLPRDAVDSAIEKALSLWEEVTPLTFSKADDGEADIKILFAVRDHGDFN 171

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPGK+LAHA+ PG G  GDAHFD DE W
Sbjct: 172 PFDGPGKVLAHAYPPGPGIYGDAHFDDDEPW 202


>gi|344287952|ref|XP_003415715.1| PREDICTED: LOW QUALITY PROTEIN: interstitial collagenase-like
           [Loxodonta africana]
          Length = 528

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 4/98 (4%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A  +WS  + L F +V +D+ADI+I F   +H D  PFDGPG  LAHAF PG G GG
Sbjct: 196 IEKAFQLWSDVTPLKFTKVFEDQADIMISFVWGDHRDNSPFDGPGGNLAHAFQPGPGIGG 255

Query: 82  DAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           D HFD DE W        + R A  + G SL L+++ +
Sbjct: 256 DVHFDEDEGWTNNLRNYNLYRVAAHELGHSLGLSHSTD 293


>gi|47085869|ref|NP_998288.1| matrix metalloproteinase-9 precursor [Danio rerio]
 gi|31419581|gb|AAH53292.1| Matrix metalloproteinase 9 [Danio rerio]
 gi|37722565|gb|AAN72418.1| matrix metalloproteinase 9 [Danio rerio]
 gi|169642693|gb|AAI60656.1| Matrix metalloproteinase 9 [Danio rerio]
          Length = 680

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 46/74 (62%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + LTF  + D  ADI+I F K +H D YPFDG   +LAHA+ PG G 
Sbjct: 140 DAFARAFKVWSDVTPLTFTRLFDGIADIMISFGKLDHGDPYPFDGKDGLLAHAYPPGEGT 199

Query: 80  GGDAHFDIDEDWMV 93
            GDAHFD DE W +
Sbjct: 200 QGDAHFDDDEYWTL 213


>gi|73955220|ref|XP_536598.2| PREDICTED: collagenase 3 [Canis lupus familiaris]
          Length = 470

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 137 FKKAFKVWSDVTPLNFTRLHDGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 196

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 197 DAHFDDDETW--------TSSSKGYNLFLVAAHE 222


>gi|432888024|ref|XP_004075029.1| PREDICTED: matrix metalloproteinase-17-like [Oryzias latipes]
          Length = 769

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 52/90 (57%), Gaps = 1/90 (1%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           ++  PK      R  +R  +  AL VWS  + L F EV  + ADI I F K +H DGYPF
Sbjct: 310 VRTFPKDSALLGRDTVRALMYYALKVWSDIAPLNFHEVAGNDADIQIDFTKADHNDGYPF 369

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 370 DGPGGTVAHAFFPGERFTAGDTHFDDDEAW 399


>gi|281341736|gb|EFB17320.1| hypothetical protein PANDA_011008 [Ailuropoda melanoleuca]
          Length = 437

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  +++  ADI+I F  ++H D YPFDGP  +LAHAF PG   GG
Sbjct: 137 FRKAFKVWSDVTPLNFTRLHEGTADIMISFGTKDHGDFYPFDGPSGLLAHAFPPGPNYGG 196

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 197 DAHFDDDETW--------TSSSKGYNLFLVAAHE 222


>gi|293339906|ref|XP_001055465.2| PREDICTED: matrix metalloproteinase-25 [Rattus norvegicus]
          Length = 615

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 3/77 (3%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDD--RADILIYFEKENHWDGYPFDGPGKILAHAFFP 75
           +R  +  ALDVW+  S LTF+EV+      DI+I+F +  H D YPFDGPG  LAHAFFP
Sbjct: 192 VRTLVSYALDVWAVASGLTFQEVDSQYQEPDIVIHFSRAYHQDSYPFDGPGGTLAHAFFP 251

Query: 76  GSGR-GGDAHFDIDEDW 91
           G     GD HFD +E W
Sbjct: 252 GEHPISGDTHFDDEETW 268


>gi|114635797|ref|XP_508241.2| PREDICTED: matrix metalloproteinase-26 [Pan troglodytes]
          Length = 261

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 8/98 (8%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           ++D +  A+ +WS  + L F++V ++ ADI I F +  H DG+PFDGPG IL HAF P S
Sbjct: 120 VKDSIYNAVSIWSNVTPLIFQQVQNEDADIKISFWQWAHEDGWPFDGPGGILGHAFLPNS 179

Query: 78  GRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           G  G  HFD +E W        + +D G +L L    E
Sbjct: 180 GNPGVVHFDKNEHW--------SASDTGYNLFLVATHE 209


>gi|297707242|ref|XP_002830421.1| PREDICTED: matrix metalloproteinase-9 isoform 1 [Pongo abelii]
          Length = 707

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/109 (44%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + L F  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLNFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD DE W     V+  +R  NAD G +       EGR +
Sbjct: 194 PGPGIQGDAHFDDDELWSLGKGVVVPTRFGNAD-GAACHFPFTFEGRSY 241


>gi|50731121|ref|XP_417176.1| PREDICTED: interstitial collagenase [Gallus gallus]
          Length = 466

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/72 (50%), Positives = 47/72 (65%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           + +++AL VWS  + LTF++  D  ADI+I F   +H D  PFDGP  +LAHAF PG G 
Sbjct: 132 EAIQKALKVWSSVTPLTFQKTEDKIADIMISFAYRDHNDNSPFDGPNGLLAHAFQPGEGL 191

Query: 80  GGDAHFDIDEDW 91
           GGD H D +E W
Sbjct: 192 GGDVHLDEEETW 203


>gi|8052272|emb|CAB92315.1| membrane-type-4 matrix metalloproteinase [Mus musculus]
          Length = 578

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/90 (52%), Positives = 54/90 (60%), Gaps = 7/90 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV  + ADI I F K +H DGYPF
Sbjct: 140 RVRTFPRDSPLGRDTVRALMYYALKVWSDITPLNFHEVAGNAADIQIDFSKADHNDGYPF 199

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 200 DGPGGTVAHAFFPGDHHTAGDTHFDDDEPW 229


>gi|21624137|dbj|BAA82708.2| membrane-type-4 matrix metalloproteinase [Mus musculus]
          Length = 578

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/90 (52%), Positives = 54/90 (60%), Gaps = 7/90 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV  + ADI I F K +H DGYPF
Sbjct: 140 RVRTFPRDSPLGRDTVRALMYYALKVWSDITPLNFHEVAGNAADIQIDFSKADHNDGYPF 199

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 200 DGPGGTVAHAFFPGDHHTAGDTHFDDDEPW 229


>gi|31543257|ref|NP_035976.3| matrix metalloproteinase-17 precursor [Mus musculus]
 gi|341941001|sp|Q9R0S3.3|MMP17_MOUSE RecName: Full=Matrix metalloproteinase-17; Short=MMP-17; AltName:
           Full=Membrane-type matrix metalloproteinase 4;
           Short=MT-MMP 4; Short=MTMMP4; AltName:
           Full=Membrane-type-4 matrix metalloproteinase;
           Short=MT4-MMP; Short=MT4MMP; Flags: Precursor
 gi|30354087|gb|AAH51917.1| Matrix metallopeptidase 17 [Mus musculus]
 gi|148687566|gb|EDL19513.1| matrix metallopeptidase 17 [Mus musculus]
          Length = 578

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/90 (52%), Positives = 54/90 (60%), Gaps = 7/90 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV  + ADI I F K +H DGYPF
Sbjct: 140 RVRTFPRDSPLGRDTVRALMYYALKVWSDITPLNFHEVAGNAADIQIDFSKADHNDGYPF 199

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 200 DGPGGTVAHAFFPGDHHTAGDTHFDDDEPW 229


>gi|4633133|gb|AAD26635.1| matrix metalloproteinase-2 precursor [Canis lupus familiaris]
          Length = 152

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 49/80 (61%)

Query: 14 DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
          D   + D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 17 DPETVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAF 76

Query: 74 FPGSGRGGDAHFDIDEDWMV 93
           PG G GGD+HFD DE W +
Sbjct: 77 APGPGVGGDSHFDDDELWTL 96


>gi|109108478|ref|XP_001098794.1| PREDICTED: collagenase 3 isoform 2 [Macaca mulatta]
          Length = 489

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|157278497|ref|NP_001098350.1| gelatinase B precursor [Oryzias latipes]
 gi|6116886|dbj|BAA85770.1| gelatinase B [Oryzias latipes]
          Length = 690

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 47/74 (63%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + LTF  + D  ADI+I F K++H D YPFDG   +LAHA+ PG G 
Sbjct: 141 DAFARAFKVWSDVTPLTFTRLFDGTADIMISFGKKDHGDLYPFDGKDGLLAHAYPPGEGI 200

Query: 80  GGDAHFDIDEDWMV 93
            GDAHFD DE W +
Sbjct: 201 QGDAHFDDDEFWTL 214


>gi|363729353|ref|XP_003640635.1| PREDICTED: collagenase 3 [Gallus gallus]
          Length = 471

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 45/77 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +    +RA  VWS  + L F  +    ADI+I F  + H D YPFDGP  +LAHAF 
Sbjct: 131 RAEVERAFKRAFKVWSDVTPLNFTRIRSGTADIMISFGTKEHGDFYPFDGPSGLLAHAFP 190

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG   GGDAHFD DE W
Sbjct: 191 PGPDYGGDAHFDDDETW 207


>gi|5020211|gb|AAD38037.1| matrix metalloproteinase-13 [Canis lupus familiaris]
          Length = 196

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 2   FKKAFKVWSDVTPLNFTRLHDGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 61

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 62  DAHFDDDETW--------TSSSKGYNLFLVAAHE 87


>gi|348574091|ref|XP_003472824.1| PREDICTED: matrix metalloproteinase-20-like [Cavia porcellus]
          Length = 483

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 49/89 (55%), Gaps = 4/89 (4%)

Query: 9   RVRHYDRGRLRDELRRALDV----WSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+  Y       E+ RA+++    WS    L F  +N   ADI++ FE  +H D YPFDG
Sbjct: 125 RISKYAASMSPAEVERAIEMALRAWSSAVPLNFVRINSGEADIMVSFETGDHGDSYPFDG 184

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           P   LAHAF PG G GGD HFD  E W +
Sbjct: 185 PRGTLAHAFAPGEGLGGDTHFDNAEKWTL 213


>gi|312384573|gb|EFR29270.1| hypothetical protein AND_01925 [Anopheles darlingi]
          Length = 1055

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 2/72 (2%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFP--GSGR 79
           + +A   WSK+SKL F  V D  ADI++ F   +H D YPFDGPG ILAHAF+P   +  
Sbjct: 105 MAKAFGEWSKYSKLRFVRVYDPSADIIVGFGSGHHGDNYPFDGPGNILAHAFYPYEMNAY 164

Query: 80  GGDAHFDIDEDW 91
           GGD HFD DE+W
Sbjct: 165 GGDIHFDEDENW 176


>gi|157167961|ref|XP_001662924.1| matrix metalloproteinase [Aedes aegypti]
 gi|108881541|gb|EAT45766.1| AAEL002982-PA, partial [Aedes aegypti]
          Length = 470

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 2/72 (2%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFP--GSGR 79
           ++RA + W+K+S L F  V D  ADI++ F   +H D YPFDGPG ILAHAF+P      
Sbjct: 105 MQRAFNEWAKYSNLKFVRVYDPSADIIVGFGSGHHGDNYPFDGPGNILAHAFYPYEMQSY 164

Query: 80  GGDAHFDIDEDW 91
           GGD HFD DE+W
Sbjct: 165 GGDIHFDEDENW 176


>gi|397496490|ref|XP_003819068.1| PREDICTED: matrix metalloproteinase-26 [Pan paniscus]
          Length = 261

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 8/98 (8%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           ++D +  A+ +WS  + L F++V ++ ADI I F +  H DG+PFDGPG IL HAF P S
Sbjct: 120 VKDSIYYAVSIWSNVTPLIFQQVQNEDADIKISFWQWAHEDGWPFDGPGGILGHAFLPNS 179

Query: 78  GRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           G  G  HFD +E W        + +D G +L L    E
Sbjct: 180 GNPGVVHFDKNEHW--------SASDTGYNLFLVATHE 209


>gi|395814624|ref|XP_003780845.1| PREDICTED: matrix metalloproteinase-20 [Otolemur garnettii]
          Length = 483

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 42/72 (58%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  AL  WS    L F  VN   ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 142 IEMALRAWSSAVPLNFVRVNTGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGG 201

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 202 DTHFDNAEKWTL 213


>gi|344238610|gb|EGV94713.1| Matrix metalloproteinase-16 [Cricetulus griseus]
          Length = 394

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 40  RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 99

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 100 AYFPGPGIGGDTHFDSDEPWTL 121


>gi|149045489|gb|EDL98489.1| matrix metalloproteinase 16, isoform CRA_a [Rattus norvegicus]
 gi|149045490|gb|EDL98490.1| matrix metalloproteinase 16, isoform CRA_a [Rattus norvegicus]
          Length = 607

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|410971811|ref|XP_003992356.1| PREDICTED: stromelysin-1 [Felis catus]
          Length = 478

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +     +AL  W + + LTF ++ +  ADI+I+F   +H D  
Sbjct: 113 HLTYRIVNYTLDLPREAVDSAFEKALKAWEEVTPLTFSKIYEGEADIMIFFAVRDHGDFI 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG IL HA+ PG G  GDAHFD DE W
Sbjct: 173 PFDGPGNILGHAYAPGPGINGDAHFDDDEQW 203


>gi|2564101|gb|AAB81681.1| gelatinase B [Canis lupus familiaris]
          Length = 704

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/79 (50%), Positives = 46/79 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VWS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDVIDDAFARAFAVWSAVTPLTFTRVYGPEADIIIQFGVREHGDGYPFDGKNGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           PG G  GDAHFD +E W +
Sbjct: 194 PGPGIQGDAHFDDEELWTL 212


>gi|7305275|ref|NP_038931.1| matrix metalloproteinase-20 precursor [Mus musculus]
 gi|12585270|sp|P57748.1|MMP20_MOUSE RecName: Full=Matrix metalloproteinase-20; Short=MMP-20; AltName:
           Full=Enamel metalloproteinase; AltName: Full=Enamelysin;
           Flags: Precursor
 gi|6815255|gb|AAF28470.1|AF155933_1 matrix metalloproteinase-20 [Mus musculus]
 gi|6815269|gb|AAF28472.1| matrix metalloproteinase-20 [Mus musculus]
 gi|148692992|gb|EDL24939.1| matrix metallopeptidase 20 (enamelysin) [Mus musculus]
 gi|156229730|gb|AAI52336.1| Matrix metallopeptidase 20 (enamelysin) [Mus musculus]
 gi|156229732|gb|AAI52337.1| Matrix metallopeptidase 20 (enamelysin) [Mus musculus]
 gi|182888447|gb|AAI60269.1| Matrix metallopeptidase 20 (enamelysin) [synthetic construct]
          Length = 482

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 43/72 (59%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           ++ AL  WS    L F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 141 IQMALHAWSTAVPLNFVRINSGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGG 200

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 201 DTHFDNAEKWTM 212


>gi|260793745|ref|XP_002591871.1| hypothetical protein BRAFLDRAFT_125518 [Branchiostoma floridae]
 gi|229277083|gb|EEN47882.1| hypothetical protein BRAFLDRAFT_125518 [Branchiostoma floridae]
          Length = 758

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 1/80 (1%)

Query: 16  GRLRDELRRALDVWSKHSKLTFREVN-DDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           G  +D + +ALD+W++ + LTF  V  DD ADI+I F   +H DG PFDG G  L HAFF
Sbjct: 279 GEQKDAIAKALDLWAQVTPLTFTLVAPDDEADIVIQFLSGDHGDGSPFDGNGGTLGHAFF 338

Query: 75  PGSGRGGDAHFDIDEDWMVL 94
           PG G GGD HFD  E + ++
Sbjct: 339 PGDGIGGDTHFDEAEVFNIV 358


>gi|157786912|ref|NP_001099395.1| matrix metalloproteinase-17 precursor [Rattus norvegicus]
 gi|149063179|gb|EDM13502.1| matrix metallopeptidase 17 (predicted) [Rattus norvegicus]
          Length = 587

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/90 (52%), Positives = 54/90 (60%), Gaps = 7/90 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV  + ADI I F K +H DGYPF
Sbjct: 140 RVRTFPRDSPLGRDTVRALMYYALKVWSDITPLNFHEVAGNMADIQIDFSKADHNDGYPF 199

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 200 DGPGGTVAHAFFPGDHHTAGDTHFDDDEAW 229


>gi|125838084|ref|XP_001345507.1| PREDICTED: collagenase 3 [Danio rerio]
          Length = 461

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+AL+VWSK + L F +  D  ADI+I F  + H D  PFDGP  +LAHA+ PG G GG
Sbjct: 129 VRKALNVWSKVTPLRFTKTFDGTADIMISFGTKEHGDFNPFDGPEGLLAHAYPPGIGIGG 188

Query: 82  DAHFDIDEDW 91
           D HFD DE W
Sbjct: 189 DTHFDEDETW 198


>gi|426241571|ref|XP_004014663.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-9 [Ovis
           aries]
          Length = 701

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 46/77 (59%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDVIDDAFARAFALWSAVTPLTFTRVYGREADIVIQFGVREHGDGYPFDGKNGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PGSG  GDAHFD +E W
Sbjct: 194 PGSGIQGDAHFDDEELW 210


>gi|426235871|ref|XP_004011901.1| PREDICTED: matrix metalloproteinase-16 [Ovis aries]
          Length = 607

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|6573123|gb|AAF17559.1|AF201729_1 matrix metalloproteinase-13 [Canis lupus familiaris]
          Length = 452

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 130 FKKAFKVWSDVTPLNFTRLHDGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 189

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 190 DAHFDDDETW--------TSSSKGYNLFLVAAHE 215


>gi|40254544|ref|NP_062698.2| matrix metalloproteinase-16 precursor [Mus musculus]
 gi|341941000|sp|Q9WTR0.3|MMP16_MOUSE RecName: Full=Matrix metalloproteinase-16; Short=MMP-16; AltName:
           Full=Membrane-type matrix metalloproteinase 3;
           Short=MT-MMP 3; Short=MTMMP3; AltName:
           Full=Membrane-type-3 matrix metalloproteinase;
           Short=MT3-MMP; Short=MT3MMP; Flags: Precursor
 gi|34785576|gb|AAH57926.1| Matrix metallopeptidase 16 [Mus musculus]
 gi|148673638|gb|EDL05585.1| matrix metallopeptidase 16, isoform CRA_a [Mus musculus]
 gi|148673640|gb|EDL05587.1| matrix metallopeptidase 16, isoform CRA_a [Mus musculus]
          Length = 607

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|14917012|sp|O18733.2|MMP9_CANFA RecName: Full=Matrix metalloproteinase-9; Short=MMP-9; AltName:
           Full=92 kDa gelatinase; AltName: Full=92 kDa type IV
           collagenase; AltName: Full=Gelatinase B; Short=GELB;
           Flags: Precursor
 gi|11034716|dbj|BAA22087.3| matrix metalloproteinase-9 [Canis lupus familiaris]
          Length = 704

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/79 (50%), Positives = 46/79 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VWS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDVIDDAFARAFAVWSAVTPLTFTRVYGPEADIIIQFGVREHGDGYPFDGKNGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           PG G  GDAHFD +E W +
Sbjct: 194 PGPGIQGDAHFDDEELWTL 212


>gi|431891897|gb|ELK02431.1| Matrix metalloproteinase-16 [Pteropus alecto]
          Length = 680

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/82 (50%), Positives = 45/82 (54%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV           ADI I F    H D  PFDG G  LAH
Sbjct: 222 RKAIRRAFDVWQNVTPLTFEEVPYGELESGRRDADITIIFASGFHGDSSPFDGEGGFLAH 281

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 282 AYFPGPGIGGDTHFDSDEPWTL 303


>gi|355566995|gb|EHH23374.1| hypothetical protein EGK_06829 [Macaca mulatta]
          Length = 489

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|62897629|dbj|BAD96754.1| matrix metalloproteinase 1 preproprotein variant [Homo sapiens]
          Length = 390

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  + LTF +V++ +ADI+I F + +H D  
Sbjct: 34  HLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNS 93

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGPG  LAHA  PG G GGDAHFD DE W        + R A  + G SL L+++ +
Sbjct: 94  PFDGPGGNLAHACQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTD 152


>gi|355698082|gb|EHH28630.1| Matrix metalloproteinase-16, partial [Macaca mulatta]
          Length = 568

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 110 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 169

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 170 AYFPGPGIGGDTHFDSDEPWTL 191


>gi|4996355|dbj|BAA78420.1| membrane-type-3 matrix metalloproteinase [Mus musculus]
          Length = 607

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|410971807|ref|XP_003992354.1| PREDICTED: neutrophil collagenase [Felis catus]
          Length = 468

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/67 (55%), Positives = 43/67 (64%)

Query: 25  ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
           A  VW+  S LTF +++   ADI I F + +H D  PFDGP  ILAHAF PG G GGDAH
Sbjct: 139 AFQVWANASSLTFTKISQGEADINIAFYEGDHGDNSPFDGPNGILAHAFQPGPGIGGDAH 198

Query: 85  FDIDEDW 91
           FD  E W
Sbjct: 199 FDEQETW 205


>gi|126322083|ref|XP_001368525.1| PREDICTED: matrix metalloproteinase-16 [Monodelphis domestica]
          Length = 607

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|355752583|gb|EHH56703.1| hypothetical protein EGM_06166 [Macaca fascicularis]
          Length = 489

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|345326094|ref|XP_001506645.2| PREDICTED: matrix metalloproteinase-16 [Ornithorhynchus anatinus]
          Length = 584

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 126 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 185

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 186 AYFPGPGIGGDTHFDSDEPWTL 207


>gi|260819836|ref|XP_002605242.1| hypothetical protein BRAFLDRAFT_92284 [Branchiostoma floridae]
 gi|229290573|gb|EEN61252.1| hypothetical protein BRAFLDRAFT_92284 [Branchiostoma floridae]
          Length = 499

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 4/79 (5%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVND-DRADILIYFEKENHWDGYPFDGPGKILAHA 72
           ++ R+++ + RA+ +WS  S LTF E  D  +AD ++ F K +H DGYPFDG G I AHA
Sbjct: 129 EKYRVQNTVARAIKLWSDASPLTFYEAKDRQKADFVVKFIKGDHNDGYPFDGEGGIYAHA 188

Query: 73  FFPGSGRGGDAHFDIDEDW 91
           FFP   + GD HFD DE W
Sbjct: 189 FFP---QDGDVHFDNDEIW 204


>gi|149042905|gb|EDL96479.1| matrix metallopeptidase 9 [Rattus norvegicus]
          Length = 708

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/77 (53%), Positives = 45/77 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VWS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 135 RDVIDDSFARAFAVWSAVTPLTFTRVYGLEADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 194

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD DE W
Sbjct: 195 PGPGIQGDAHFDDDELW 211


>gi|13591993|ref|NP_112317.1| matrix metalloproteinase-9 precursor [Rattus norvegicus]
 gi|1173506|gb|AAA90911.1| gelatinase B [Rattus norvegicus]
          Length = 708

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/77 (53%), Positives = 45/77 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VWS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 135 RDVIDDSFARAFAVWSAVTPLTFTRVYGLEADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 194

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD DE W
Sbjct: 195 PGPGIQGDAHFDDDELW 211


>gi|410909648|ref|XP_003968302.1| PREDICTED: collagenase 3-like [Takifugu rubripes]
 gi|386799509|gb|AFJ38185.1| matrix metalloproteinase [Takifugu rubripes]
          Length = 459

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 49/70 (70%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R+AL++W+  + LTF++++   ADI+I F    H D  PFDGP  +LAHA+ PG G GG
Sbjct: 127 VRKALNLWAAVTPLTFKKLHTGTADIMISFGSGEHGDYNPFDGPNSLLAHAYPPGQGIGG 186

Query: 82  DAHFDIDEDW 91
           D HFD DE+W
Sbjct: 187 DVHFDEDENW 196


>gi|1705984|sp|P50282.1|MMP9_RAT RecName: Full=Matrix metalloproteinase-9; Short=MMP-9; AltName:
           Full=92 kDa gelatinase; AltName: Full=92 kDa type IV
           collagenase; AltName: Full=Gelatinase B; Short=GELB;
           Flags: Precursor
 gi|1022784|gb|AAB01721.1| 92-kDa type IV collagenase [Rattus norvegicus]
          Length = 708

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/77 (53%), Positives = 45/77 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VWS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 135 RDVIDDSFARAFAVWSAVTPLTFTRVYGLEADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 194

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD DE W
Sbjct: 195 PGPGIQGDAHFDDDELW 211


>gi|1514965|dbj|BAA11525.1| stromelysin-1/2-b [Cynops pyrrhogaster]
          Length = 469

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 4/105 (3%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +   +++A  VWS  + LTF ++    ADI I F    H D  PFDGP   LAHAF 
Sbjct: 125 RADVDTAIQKAFKVWSDVTPLTFTQIYYGTADIQISFGAREHGDFNPFDGPYGTLAHAFA 184

Query: 75  PGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
           PG+G GGDAHFD DE W  +    +    A  + G SL L+++++
Sbjct: 185 PGTGIGGDAHFDEDEKWSKVSTGTNLFLVAAHEFGHSLGLSHSND 229


>gi|403290854|ref|XP_003936522.1| PREDICTED: matrix metalloproteinase-9 [Saimiri boliviensis
           boliviensis]
          Length = 703

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/109 (43%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLTFTRVYSQDADIVILFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD +E W     V+  ++  NAD G +       EGR +
Sbjct: 194 PGPGIQGDAHFDDEELWTLGKGVVVPTQFGNAD-GAACHFPFTFEGRSY 241


>gi|296200604|ref|XP_002747652.1| PREDICTED: matrix metalloproteinase-9 isoform 1 [Callithrix
           jacchus]
          Length = 703

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/109 (43%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLTFTRVYSQDADIVILFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD +E W     V+  ++  NAD G +       EGR +
Sbjct: 194 PGPGIQGDAHFDDEELWTLGKGVVVPTQFGNAD-GAACHFPFTFEGRSY 241


>gi|332208038|ref|XP_003253103.1| PREDICTED: collagenase 3 [Nomascus leucogenys]
          Length = 471

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|110591107|pdb|2D1N|A Chain A, Collagenase-3 (Mmp-13) Complexed To A Hydroxamic Acid
           Inhibitor
 gi|110591108|pdb|2D1N|B Chain B, Collagenase-3 (Mmp-13) Complexed To A Hydroxamic Acid
           Inhibitor
          Length = 166

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 8/99 (8%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
            +    ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG
Sbjct: 30  EVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPG 89

Query: 77  SGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
              GGDAHFD DE W         ++ +G +L L  A E
Sbjct: 90  PNYGGDAHFDDDETW--------TSSSKGYNLFLVAAHE 120


>gi|140326590|gb|ABO86718.1| matrix metalloproteinase-9 [Ictalurus punctatus]
          Length = 686

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/80 (48%), Positives = 48/80 (60%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + LTF  + +  ADI+I F K +H D YPFDG   +LAHA+
Sbjct: 134 DASVIDDAFARAFKVWSDVTPLTFTRLYNGIADIMISFGKRDHGDPYPFDGKDGLLAHAY 193

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG G  GDAHFD DE W +
Sbjct: 194 PPGEGVQGDAHFDDDEYWTL 213


>gi|117647501|gb|ABK51704.1| matrix metalloproteinase 20 [Caiman crocodilus apaporiensis]
          Length = 437

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 49/89 (55%), Gaps = 4/89 (4%)

Query: 9   RVRHYDRGRLRDELRRALDV----WSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           RV  Y       E+ +A+++    WS  + L F   N   ADI+I FE  +H D YPFDG
Sbjct: 76  RVSKYTSSLSHAEVDKAVEMGLKAWSNAAPLNFVRANTGEADIMISFETGDHGDSYPFDG 135

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           P   LAHAF PG G GGD HFD  E W +
Sbjct: 136 PRGTLAHAFAPGEGLGGDTHFDSAEKWTM 164


>gi|402895066|ref|XP_003910656.1| PREDICTED: collagenase 3 [Papio anubis]
          Length = 471

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|15825642|pdb|1FLS|A Chain A, Solution Structure Of The Catalytic Fragment Of Human
           Collagenase-3 (Mmp-13) Complexed With A Hydroxamic Acid
           Inhibitor
 gi|15825643|pdb|1FM1|A Chain A, Solution Structure Of The Catalytic Fragment Of Human
           Collagenase-3 (Mmp-13) Complexed With A Hydroxamic Acid
           Inhibitor
 gi|109157040|pdb|1ZTQ|A Chain A, Crystal Structure Of The Catalytic Domain Of Mmp-13
           Complexed With Way-033
 gi|109157041|pdb|1ZTQ|B Chain B, Crystal Structure Of The Catalytic Domain Of Mmp-13
           Complexed With Way-033
 gi|109157042|pdb|1ZTQ|C Chain C, Crystal Structure Of The Catalytic Domain Of Mmp-13
           Complexed With Way-033
 gi|109157043|pdb|1ZTQ|D Chain D, Crystal Structure Of The Catalytic Domain Of Mmp-13
           Complexed With Way-033
 gi|145579292|pdb|2E2D|A Chain A, Flexibility And Variability Of Timp Binding: X-Ray
           Structure Of The Complex Between Collagenase-3MMP-13 And
           Timp-2
 gi|185177543|pdb|2PJT|A Chain A, Crystal Structure Of The Catalytic Domain Of Mmp-13
           Complexed With Way-344
 gi|185177544|pdb|2PJT|B Chain B, Crystal Structure Of The Catalytic Domain Of Mmp-13
           Complexed With Way-344
 gi|185177545|pdb|2PJT|C Chain C, Crystal Structure Of The Catalytic Domain Of Mmp-13
           Complexed With Way-344
 gi|185177546|pdb|2PJT|D Chain D, Crystal Structure Of The Catalytic Domain Of Mmp-13
           Complexed With Way-344
          Length = 165

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 8/99 (8%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
            +    ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG
Sbjct: 30  EVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPG 89

Query: 77  SGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
              GGDAHFD DE W         ++ +G +L L  A E
Sbjct: 90  PNYGGDAHFDDDETW--------TSSSKGYNLFLVAAHE 120


>gi|311263815|ref|XP_003129856.1| PREDICTED: collagenase 3 [Sus scrofa]
          Length = 470

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  +++  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 137 FKKAFKVWSDVTPLNFTRIHNGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 196

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 197 DAHFDDDETW--------TSSSKGYNLFLVAAHE 222


>gi|109108476|ref|XP_001098996.1| PREDICTED: collagenase 3 isoform 4 [Macaca mulatta]
          Length = 471

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|126723161|ref|NP_001075749.1| stromelysin-1 preproprotein [Oryctolagus cuniculus]
 gi|116859|sp|P28863.1|MMP3_RABIT RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
           metalloproteinase-3; Short=MMP-3; AltName:
           Full=Transin-1; Flags: Precursor
 gi|165710|gb|AAA31467.1| metalloproteinase synovial cell activator precursor [Oryctolagus
           cuniculus]
          Length = 478

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 52/94 (55%), Gaps = 4/94 (4%)

Query: 2   TLKHHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHW 57
           T  H   R+ +Y     RD     + +AL VW + + LTF    +  ADI+I F    H 
Sbjct: 111 TKTHLTYRIVNYTPDLPRDAVDAAIEKALKVWEEVTPLTFSRKYEGEADIMISFGVREHG 170

Query: 58  DGYPFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           D  PFDGPG +LAHA+ PG G  GDAHFD DE W
Sbjct: 171 DFIPFDGPGNVLAHAYAPGPGINGDAHFDDDEQW 204


>gi|308198518|pdb|3KRY|A Chain A, Crystal Structure Of Mmp-13 In Complex With Sc-78080
 gi|308198519|pdb|3KRY|B Chain B, Crystal Structure Of Mmp-13 In Complex With Sc-78080
 gi|308198520|pdb|3KRY|C Chain C, Crystal Structure Of Mmp-13 In Complex With Sc-78080
 gi|308198521|pdb|3KRY|D Chain D, Crystal Structure Of Mmp-13 In Complex With Sc-78080
          Length = 164

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 8/99 (8%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
            +    ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG
Sbjct: 30  EVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPG 89

Query: 77  SGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
              GGDAHFD DE W         ++ +G +L L  A E
Sbjct: 90  PNYGGDAHFDDDETW--------TSSSKGYNLFLVAAHE 120


>gi|292625366|ref|XP_694153.3| PREDICTED: stromelysin-3 [Danio rerio]
          Length = 496

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 51/83 (61%)

Query: 11  RHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILA 70
           R  +  R+R  +R AL  WS  + L F EV   RADI+  F + +H D   FDGPG ILA
Sbjct: 133 RQMNLERVRYVIREALRAWSDETPLNFTEVLSGRADIMFDFYRYSHGDYLNFDGPGGILA 192

Query: 71  HAFFPGSGRGGDAHFDIDEDWMV 93
           HAFFP + R G+ HFD+DE W +
Sbjct: 193 HAFFPRTYREGEIHFDMDESWTL 215


>gi|50978992|ref|NP_001003219.1| matrix metalloproteinase-9 precursor [Canis lupus familiaris]
 gi|5738156|gb|AAD50275.1| matrix metalloproteinase-9 [Canis lupus familiaris]
          Length = 704

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/79 (50%), Positives = 46/79 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VWS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDVIDDAFARAFAVWSAVTPLTFTRVYGPEADIIIQFGVREHGDGYPFDGKNGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           PG G  GDAHFD +E W +
Sbjct: 194 PGPGIQGDAHFDDEELWTL 212


>gi|126723537|ref|NP_001075506.1| collagenase 3 precursor [Oryctolagus cuniculus]
 gi|5921829|sp|O62806.1|MMP13_RABIT RecName: Full=Collagenase 3; AltName: Full=Matrix
           metalloproteinase-13; Short=MMP-13; Flags: Precursor
 gi|3089539|gb|AAC39251.1| collagenase-3 precursor [Oryctolagus cuniculus]
          Length = 471

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  +++  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRIHNGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|281341734|gb|EFB17318.1| hypothetical protein PANDA_011006 [Ailuropoda melanoleuca]
          Length = 442

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     RD     + +AL +W + + LTF + +D  ADI I F   +H D  
Sbjct: 78  HLTYRIMNYMLDLPRDAVDSAIEKALSLWEEVTPLTFSKADDGEADIKILFAVRDHGDFN 137

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPGK+LAHA+ PG G  GDAHFD DE W
Sbjct: 138 PFDGPGKVLAHAYPPGPGIYGDAHFDDDEPW 168


>gi|321159779|pdb|3LJZ|A Chain A, Crystal Structure Of Human Mmp-13 Complexed With An
           Amino-2-Indanol Compound
 gi|321159780|pdb|3LJZ|B Chain B, Crystal Structure Of Human Mmp-13 Complexed With An
           Amino-2-Indanol Compound
 gi|321159781|pdb|3LJZ|C Chain C, Crystal Structure Of Human Mmp-13 Complexed With An
           Amino-2-Indanol Compound
 gi|321159782|pdb|3LJZ|D Chain D, Crystal Structure Of Human Mmp-13 Complexed With An
           Amino-2-Indanol Compound
 gi|343197147|pdb|3O2X|A Chain A, Mmp-13 In Complex With Selective Tetrazole Core Inhibitor
 gi|343197148|pdb|3O2X|B Chain B, Mmp-13 In Complex With Selective Tetrazole Core Inhibitor
 gi|343197149|pdb|3O2X|C Chain C, Mmp-13 In Complex With Selective Tetrazole Core Inhibitor
 gi|343197150|pdb|3O2X|D Chain D, Mmp-13 In Complex With Selective Tetrazole Core Inhibitor
          Length = 164

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 8/99 (8%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
            +    ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG
Sbjct: 30  EVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPG 89

Query: 77  SGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
              GGDAHFD DE W         ++ +G +L L  A E
Sbjct: 90  PNYGGDAHFDDDETW--------TSSSKGYNLFLVAAHE 120


>gi|126323935|ref|XP_001378518.1| PREDICTED: matrix metalloproteinase-17 [Monodelphis domestica]
          Length = 589

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/91 (51%), Positives = 53/91 (58%), Gaps = 7/91 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 127 RVRTFPRDSSLGRDTVRALMYYALKVWSDITPLNFHEVAGSNADIQIDFSKADHNDGYPF 186

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDWM 92
           DGPG  +AHAFFPG     GD HFD DE W 
Sbjct: 187 DGPGGTVAHAFFPGDHHTAGDTHFDDDEAWT 217


>gi|134105439|pdb|2OW9|A Chain A, Crystal Structure Analysis Of The Mmp13 Catalytic Domain
           In Complex With Specific Inhibitor
 gi|134105440|pdb|2OW9|B Chain B, Crystal Structure Analysis Of The Mmp13 Catalytic Domain
           In Complex With Specific Inhibitor
 gi|157835594|pdb|2OZR|A Chain A, Mmp13 Catalytic Domain Complexed With
           4-{[1-Methyl-2,4-Dioxo-6-(3-
           Phenylprop-1-Yn-1-Yl)-1,
           4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
 gi|157835595|pdb|2OZR|B Chain B, Mmp13 Catalytic Domain Complexed With
           4-{[1-Methyl-2,4-Dioxo-6-(3-
           Phenylprop-1-Yn-1-Yl)-1,
           4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
 gi|157835596|pdb|2OZR|C Chain C, Mmp13 Catalytic Domain Complexed With
           4-{[1-Methyl-2,4-Dioxo-6-(3-
           Phenylprop-1-Yn-1-Yl)-1,
           4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
 gi|157835597|pdb|2OZR|D Chain D, Mmp13 Catalytic Domain Complexed With
           4-{[1-Methyl-2,4-Dioxo-6-(3-
           Phenylprop-1-Yn-1-Yl)-1,
           4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
 gi|157835598|pdb|2OZR|E Chain E, Mmp13 Catalytic Domain Complexed With
           4-{[1-Methyl-2,4-Dioxo-6-(3-
           Phenylprop-1-Yn-1-Yl)-1,
           4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
 gi|157835599|pdb|2OZR|F Chain F, Mmp13 Catalytic Domain Complexed With
           4-{[1-Methyl-2,4-Dioxo-6-(3-
           Phenylprop-1-Yn-1-Yl)-1,
           4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
 gi|157835600|pdb|2OZR|G Chain G, Mmp13 Catalytic Domain Complexed With
           4-{[1-Methyl-2,4-Dioxo-6-(3-
           Phenylprop-1-Yn-1-Yl)-1,
           4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
 gi|157835601|pdb|2OZR|H Chain H, Mmp13 Catalytic Domain Complexed With
           4-{[1-Methyl-2,4-Dioxo-6-(3-
           Phenylprop-1-Yn-1-Yl)-1,
           4-Dihydroquinazolin-3(2h)-Yl]methyl}benzoic Acid
          Length = 170

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 8/99 (8%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
            +    ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG
Sbjct: 33  EVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPG 92

Query: 77  SGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
              GGDAHFD DE W         ++ +G +L L  A E
Sbjct: 93  PNYGGDAHFDDDETW--------TSSSKGYNLFLVAAHE 123


>gi|3550075|gb|AAC34604.1| matrix metalloproteinase-13 [Gallus gallus]
          Length = 378

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 45/77 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +    +RA  VWS  + L F  +    ADI+I F  + H D YPFDGP  +LAHAF 
Sbjct: 38  RAEVERAFKRAFKVWSDVTPLNFTRIRSGTADIMISFGTKEHGDFYPFDGPSGLLAHAFP 97

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG   GGDAHFD DE W
Sbjct: 98  PGPDYGGDAHFDDDETW 114


>gi|311772040|pdb|3KEC|A Chain A, Crystal Structure Of Human Mmp-13 Complexed With A
           Phenyl-2h-Tetrazole Compound
 gi|311772041|pdb|3KEC|B Chain B, Crystal Structure Of Human Mmp-13 Complexed With A
           Phenyl-2h-Tetrazole Compound
 gi|311772042|pdb|3KEJ|A Chain A, Crystal Structure Of Human Mmp-13 Complexed With A
           (Pyridin-4-Yl)-2h- Tetrazole Compound
 gi|311772043|pdb|3KEJ|B Chain B, Crystal Structure Of Human Mmp-13 Complexed With A
           (Pyridin-4-Yl)-2h- Tetrazole Compound
 gi|311772044|pdb|3KEK|A Chain A, Crystal Structure Of Human Mmp-13 Complexed With A
           (Pyridin-4-Yl)-2h- Tetrazole Compound
 gi|311772045|pdb|3KEK|B Chain B, Crystal Structure Of Human Mmp-13 Complexed With A
           (Pyridin-4-Yl)-2h- Tetrazole Compound
          Length = 167

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 8/99 (8%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
            +    ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG
Sbjct: 30  EVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPG 89

Query: 77  SGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
              GGDAHFD DE W         ++ +G +L L  A E
Sbjct: 90  PNYGGDAHFDDDETW--------TSSSKGYNLFLVAAHE 120


>gi|297693480|ref|XP_002824046.1| PREDICTED: matrix metalloproteinase-17-like, partial [Pongo abelii]
          Length = 181

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/90 (52%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV    ADI I F K  H DGYPF
Sbjct: 87  RVRTFPRDSPLGRDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQIDFSKAEHNDGYPF 146

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 147 DGPGGTVAHAFFPGDHHTAGDTHFDDDEAW 176


>gi|5822548|pdb|456C|A Chain A, Crystal Structure Of Collagenase-3 (Mmp-13) Complexed To A
           Diphenyl-Ether Sulphone Based Hydroxamic Acid
 gi|5822549|pdb|456C|B Chain B, Crystal Structure Of Collagenase-3 (Mmp-13) Complexed To A
           Diphenyl-Ether Sulphone Based Hydroxamic Acid
 gi|5822584|pdb|830C|A Chain A, Collagenase-3 (Mmp-13) Complexed To A Sulphone-Based
           Hydroxamic Acid
 gi|5822585|pdb|830C|B Chain B, Collagenase-3 (Mmp-13) Complexed To A Sulphone-Based
           Hydroxamic Acid
 gi|62738698|pdb|1YOU|A Chain A, Crystal Structure Of The Catalytic Domain Of Mmp-13
           Complexed With A Potent Pyrimidinetrione Inhibitor
 gi|62738699|pdb|1YOU|B Chain B, Crystal Structure Of The Catalytic Domain Of Mmp-13
           Complexed With A Potent Pyrimidinetrione Inhibitor
          Length = 168

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 8/99 (8%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
            +    ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG
Sbjct: 30  EVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPG 89

Query: 77  SGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
              GGDAHFD DE W         ++ +G +L L  A E
Sbjct: 90  PNYGGDAHFDDDETW--------TSSSKGYNLFLVAAHE 120


>gi|395752264|ref|XP_003780705.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-24 [Pongo
           abelii]
          Length = 569

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 48/82 (58%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV-----NDDR--ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RR  DVW K + LTF EV       DR  ADI+ +F    H D  PFDG G  LAH
Sbjct: 109 RKAIRRLFDVWQKVTPLTFEEVPYHEIKSDRKEADIMSFFASGFHGDSSPFDGEGGFLAH 168

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 169 AYFPGPGIGGDTHFDSDEPWTL 190


>gi|41350992|gb|AAH65591.1| Mmp13 protein [Danio rerio]
          Length = 386

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/70 (52%), Positives = 44/70 (62%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D + +AL VW+  + L F  +    ADI+I F   +H DGYPFDGP   LAHAF P  G 
Sbjct: 46  DSISKALKVWADVTPLRFTRIYSGTADIMISFATGDHRDGYPFDGPNGFLAHAFPPFEGI 105

Query: 80  GGDAHFDIDE 89
           GGDAHFD DE
Sbjct: 106 GGDAHFDDDE 115


>gi|423362617|ref|ZP_17340118.1| hypothetical protein IC1_04595 [Bacillus cereus VD022]
 gi|401077216|gb|EJP85557.1| hypothetical protein IC1_04595 [Bacillus cereus VD022]
          Length = 258

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 49/89 (55%), Gaps = 3/89 (3%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           K      +  +R  + +A  +WS+ + LTF EV  D ADILI F    H D  PFDG G 
Sbjct: 110 KFTSDLSKDEVRSAIAKAFSLWSEVTPLTFEEVTTDNADILISFVTGEHGDNNPFDGNGN 169

Query: 68  ILAHAFFPGSGRG---GDAHFDIDEDWMV 93
           +LAHA+FP    G   GDAHFD  E W +
Sbjct: 170 VLAHAYFPPPNSGSLAGDAHFDDGETWSI 198


>gi|395513530|ref|XP_003760976.1| PREDICTED: matrix metalloproteinase-17 [Sarcophilus harrisii]
          Length = 585

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/91 (51%), Positives = 53/91 (58%), Gaps = 7/91 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 123 RVRTFPRDSSLGRDTVRALMYYALKVWSDITPLNFHEVAGSNADIQIDFSKADHNDGYPF 182

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDWM 92
           DGPG  +AHAFFPG     GD HFD DE W 
Sbjct: 183 DGPGGTVAHAFFPGDHHTAGDTHFDDDEAWT 213


>gi|403292283|ref|XP_003937181.1| PREDICTED: uncharacterized protein LOC101031102 [Saimiri
           boliviensis boliviensis]
          Length = 1247

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 46/92 (50%), Positives = 52/92 (56%), Gaps = 7/92 (7%)

Query: 7   PKRVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           P RVR + R    GR  +R  +  AL VWS  + L F EV    ADI I F K +H DGY
Sbjct: 845 PWRVRTFPRDSPLGRDTVRALMYYALKVWSDIAPLNFHEVAGSTADIQIDFSKADHNDGY 904

Query: 61  PFDGPGKILAHAFFPGSGR-GGDAHFDIDEDW 91
           PFDGPG  +AHAF P      GD HFD DE W
Sbjct: 905 PFDGPGGTVAHAFLPSDHHTAGDTHFDDDEAW 936


>gi|1209010|dbj|BAA12023.1| metalloproteinase [Homo sapiens]
 gi|119612058|gb|EAW91652.1| matrix metallopeptidase 16 (membrane-inserted), isoform CRA_b [Homo
           sapiens]
          Length = 457

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|380793189|gb|AFE68470.1| matrix metalloproteinase-16 precursor, partial [Macaca mulatta]
          Length = 390

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|281352125|gb|EFB27709.1| hypothetical protein PANDA_007683 [Ailuropoda melanoleuca]
          Length = 565

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 107 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 166

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 167 AYFPGPGIGGDTHFDSDEPWTL 188


>gi|351709966|gb|EHB12885.1| Stromelysin-2, partial [Heterocephalus glaber]
          Length = 475

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     RD     + +AL +W K + LTF  + +  ADI+I F    H D Y
Sbjct: 113 HLTYRIVNYTLDLPRDAVDSAIEKALKIWEKVTPLTFTRMLEGEADIMISFAVREHGDFY 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG+ LAHA+ PG G  GD HFD DE W
Sbjct: 173 PFDGPGESLAHAYPPGPGFYGDVHFDDDEKW 203


>gi|301773284|ref|XP_002922058.1| PREDICTED: matrix metalloproteinase-20-like [Ailuropoda
           melanoleuca]
 gi|281341729|gb|EFB17313.1| hypothetical protein PANDA_011000 [Ailuropoda melanoleuca]
          Length = 483

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 42/72 (58%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  AL  WS    L F  VN   ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 142 VEMALQAWSSAVPLGFVRVNAGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGG 201

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 202 DTHFDNAEKWTM 213


>gi|327358435|gb|AEA51064.1| matrix metallopeptidase 13 [Oryzias melastigma]
          Length = 268

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 47/72 (65%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           + + +AL VW++ + L F  +  D ADI++ F + +H D YPFDGP   LAHAF P  G 
Sbjct: 128 ESIEKALQVWARVTPLRFTRIYSDTADIMVSFGRRDHGDYYPFDGPDGTLAHAFAPSPGI 187

Query: 80  GGDAHFDIDEDW 91
           GGDAHFD DE +
Sbjct: 188 GGDAHFDDDETF 199


>gi|440912243|gb|ELR61828.1| Matrix metalloproteinase-16, partial [Bos grunniens mutus]
          Length = 565

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 107 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 166

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 167 AYFPGPGIGGDTHFDSDEPWTL 188


>gi|47221888|emb|CAF98900.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 553

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 58/106 (54%), Gaps = 12/106 (11%)

Query: 17  RLRDELRRALDVWSKHSKLTFREV-------NDDRADILIYFEKENHWDGYPFDGPGKIL 69
           R  D +R+ALD+W + + LTF+E+           ADI++ F    H D   FDGPG  L
Sbjct: 107 RTLDTIRKALDMWQRVTPLTFKELPAVPSSNQSALADIMLLFASGFHGDMSLFDGPGGSL 166

Query: 70  AHAFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           AHAF+PG G GGD HFD DE W +      + ++EG  L L    E
Sbjct: 167 AHAFYPGPGMGGDTHFDADEHWTL-----DSQSEEGIDLFLVAVHE 207


>gi|327269601|ref|XP_003219582.1| PREDICTED: matrix metalloproteinase-16-like [Anolis carolinensis]
          Length = 610

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 151 RKAIRRAFDVWQNVTPLTFEEVPYIELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 210

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 211 AYFPGPGIGGDTHFDSDEPWTL 232


>gi|395814638|ref|XP_003780852.1| PREDICTED: collagenase 3 [Otolemur garnettii]
          Length = 470

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VW+  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 137 FKKAFKVWADVTPLNFTRLHDGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 196

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 197 DAHFDDDETW--------TSSSKGYNLFLVAAHE 222


>gi|1514963|dbj|BAA11524.1| stromelysin-1/2-a [Cynops pyrrhogaster]
          Length = 483

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 44/70 (62%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +RRA  VWS  + LTF  + +  ADI I F    H D YPFDGP   LAHAF PG+  GG
Sbjct: 132 IRRAFKVWSDVTPLTFSRIYEGTADIQISFGAGVHGDFYPFDGPHGTLAHAFAPGNSIGG 191

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 192 DAHFDEDETW 201


>gi|351706562|gb|EHB09481.1| Matrix metalloproteinase-16 [Heterocephalus glaber]
          Length = 561

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 90  RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 149

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 150 AYFPGPGIGGDTHFDSDEPWTL 171


>gi|149051938|gb|EDM03755.1| rCG35535 [Rattus norvegicus]
          Length = 531

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 3/77 (3%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDD--RADILIYFEKENHWDGYPFDGPGKILAHAFFP 75
           +R  +  ALDVW+  S LTF+EV+      DI+I+F +  H D YPFDGPG  LAHAFFP
Sbjct: 108 VRTLVSYALDVWAVASGLTFQEVDSQYQEPDIVIHFSRAYHQDSYPFDGPGGTLAHAFFP 167

Query: 76  GSGR-GGDAHFDIDEDW 91
           G     GD HFD +E W
Sbjct: 168 GEHPISGDTHFDDEETW 184


>gi|348513832|ref|XP_003444445.1| PREDICTED: matrix metalloproteinase-17 [Oreochromis niloticus]
          Length = 598

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 51/90 (56%), Gaps = 1/90 (1%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           ++  PK      R  +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 138 VRTFPKDSALLGRDTVRALMYYALKVWSDIAPLNFHEVAGSDADIQIDFTKADHNDGYPF 197

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 198 DGPGGTVAHAFFPGERFTAGDTHFDDDEAW 227


>gi|14278516|pdb|1EUB|A Chain A, Solution Structure Of The Catalytic Domain Of Human
           Collagenase-3 (Mmp-13) Complexed To A Potent
           Non-Peptidic Sulfonamide Inhibitor
 gi|82407471|pdb|1XUC|A Chain A, Matrix Metalloproteinase-13 Complexed With Non-Zinc
           Binding Inhibitor
 gi|82407472|pdb|1XUC|B Chain B, Matrix Metalloproteinase-13 Complexed With Non-Zinc
           Binding Inhibitor
 gi|82407473|pdb|1XUD|A Chain A, Matrix Metalloproteinase-13 Complexed With Non-Zinc
           Binding Inhibitor
 gi|82407474|pdb|1XUD|B Chain B, Matrix Metalloproteinase-13 Complexed With Non-Zinc
           Binding Inhibitor
 gi|82407477|pdb|1XUR|A Chain A, Matrix Metalloproteinase-13 Complexed With Non-Zinc
           Binding Inhibitor
 gi|82407478|pdb|1XUR|B Chain B, Matrix Metalloproteinase-13 Complexed With Non-Zinc
           Binding Inhibitor
 gi|254574820|pdb|3ELM|A Chain A, Crystal Structure Of Mmp-13 Complexed With Inhibitor 24f
 gi|254574821|pdb|3ELM|B Chain B, Crystal Structure Of Mmp-13 Complexed With Inhibitor 24f
 gi|257097686|pdb|3I7G|A Chain A, Mmp-13 In Complex With A Non Zinc-Chelating Inhibitor
 gi|257097687|pdb|3I7G|B Chain B, Mmp-13 In Complex With A Non Zinc-Chelating Inhibitor
 gi|257097688|pdb|3I7I|A Chain A, Mmp-13 In Complex With A Non Zinc-Chelating Inhibitor
 gi|257097689|pdb|3I7I|B Chain B, Mmp-13 In Complex With A Non Zinc-Chelating Inhibitor
 gi|340708402|pdb|2YIG|A Chain A, Mmp13 In Complex With A Novel Selective Non Zinc Binding
           Inhibitor
 gi|340708403|pdb|2YIG|B Chain B, Mmp13 In Complex With A Novel Selective Non Zinc Binding
           Inhibitor
 gi|353251993|pdb|3ZXH|A Chain A, Mmp-13 Complexed With 2-Napthylsulfonamide Hydroxamic Acid
           Inhibitor
 gi|353251994|pdb|3ZXH|B Chain B, Mmp-13 Complexed With 2-Napthylsulfonamide Hydroxamic Acid
           Inhibitor
          Length = 171

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 8/99 (8%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
            +    ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG
Sbjct: 30  EVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPG 89

Query: 77  SGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
              GGDAHFD DE W         ++ +G +L L  A E
Sbjct: 90  PNYGGDAHFDDDETW--------TSSSKGYNLFLVAAHE 120


>gi|32306839|gb|AAP78940.1| collagenase-3 deletion variant COL3-DEL [Homo sapiens]
          Length = 383

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|348537610|ref|XP_003456286.1| PREDICTED: matrix metalloproteinase-24 [Oreochromis niloticus]
          Length = 624

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 7/87 (8%)

Query: 22  LRRALDVWSKHSKLTFREV-------NDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           +R+A +VW   + L+F+EV           ADI+I+F    H D  PFDG G  LAHA+F
Sbjct: 158 IRQAFNVWQAVTPLSFQEVPYSEIKNEGKEADIMIFFASGFHGDSSPFDGEGGFLAHAYF 217

Query: 75  PGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           PG+G GGD HFD DE W +   +   N
Sbjct: 218 PGAGIGGDTHFDSDEPWTLGNANHDGN 244


>gi|32306837|gb|AAP78939.1| collagenase-3 splice variant COL3-9B-2 [Homo sapiens]
          Length = 489

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|119587438|gb|EAW67034.1| matrix metallopeptidase 13 (collagenase 3), isoform CRA_a [Homo
           sapiens]
          Length = 489

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|364506273|pdb|4A7B|A Chain A, Mmp13 In Complex With A Novel Selective Non Zinc Binding
           Inhibitor Cmpd22
 gi|364506274|pdb|4A7B|B Chain B, Mmp13 In Complex With A Novel Selective Non Zinc Binding
           Inhibitor Cmpd22
 gi|392311626|pdb|3TVC|A Chain A, Human Mmp13 In Complex With L-Glutamate Motif Inhibitor
          Length = 169

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 8/99 (8%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
            +    ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG
Sbjct: 30  EVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPG 89

Query: 77  SGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
              GGDAHFD DE W         ++ +G +L L  A E
Sbjct: 90  PNYGGDAHFDDDETW--------TSSSKGYNLFLVAAHE 120


>gi|403262923|ref|XP_003923814.1| PREDICTED: collagenase 3 [Saimiri boliviensis boliviensis]
          Length = 471

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|348564095|ref|XP_003467841.1| PREDICTED: matrix metalloproteinase-9-like [Cavia porcellus]
          Length = 715

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 46/77 (59%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VWS+ + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 135 RDVIDDAFARAFAVWSEVTPLTFTRVYGREADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 194

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD +E W
Sbjct: 195 PGPGIQGDAHFDDEELW 211


>gi|296481012|tpg|DAA23127.1| TPA: matrix metalloproteinase-9 precursor [Bos taurus]
          Length = 712

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/77 (50%), Positives = 45/77 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLTFTRVYGPEADIVIQFGVREHGDGYPFDGKNGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD +E W
Sbjct: 194 PGKGIQGDAHFDDEELW 210


>gi|344287829|ref|XP_003415654.1| PREDICTED: collagenase 3 [Loxodonta africana]
          Length = 471

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  +++  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FRKAFKVWSDVTPLNFTRLHNGTADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNFGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|3182966|sp|O35548.1|MMP16_RAT RecName: Full=Matrix metalloproteinase-16; Short=MMP-16; AltName:
           Full=Membrane-type matrix metalloproteinase 3;
           Short=MT-MMP 3; Short=MTMMP3; AltName:
           Full=Membrane-type-3 matrix metalloproteinase;
           Short=MT3-MMP; Short=MT3MMP; Flags: Precursor
 gi|2424975|dbj|BAA22224.1| MT3-MMP [Rattus rattus]
          Length = 607

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDRSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|333830582|gb|AEG20934.1| mmp9 [Danio rerio]
          Length = 310

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 7/109 (6%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           + D   RA  VWS  + LTF  + D  ADI+I F K +H D YPFDG   +LAHA+ PG 
Sbjct: 96  IDDAFARAFKVWSDVTPLTFTRLFDGIADIMISFGKADHGDPYPFDGKDGLLAHAYPPGE 155

Query: 78  GRGGDAHFDIDEDWMVLGV-----SRSANADEGKSLELANADEGRRHVT 121
           G  GDAHFD DE W  LG      +R  NA EG         EG  + T
Sbjct: 156 GTQGDAHFDDDEYW-TLGSGPAIQTRYGNA-EGAMCHFPFLFEGTSYST 202


>gi|354489764|ref|XP_003507031.1| PREDICTED: matrix metalloproteinase-16-like, partial [Cricetulus
           griseus]
          Length = 563

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 105 RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 164

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 165 AYFPGPGIGGDTHFDSDEPWTL 186


>gi|10444090|gb|AAG17704.1|AF282844_1 matrix metalloproteinase 16 [Mus musculus]
          Length = 607

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDRSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|410971805|ref|XP_003992353.1| PREDICTED: matrix metalloproteinase-20 [Felis catus]
          Length = 483

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 41/72 (56%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +  AL  W     LTF  V    ADI+I FE  +H D YPFDGP   LAHAF PG G GG
Sbjct: 142 VEMALQAWGSAVPLTFVRVTSGEADIMISFESGDHGDSYPFDGPRGTLAHAFAPGEGLGG 201

Query: 82  DAHFDIDEDWMV 93
           D HFD  E W +
Sbjct: 202 DTHFDNAEKWTM 213


>gi|397516406|ref|XP_003828421.1| PREDICTED: collagenase 3 [Pan paniscus]
          Length = 471

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|114640119|ref|XP_001154361.1| PREDICTED: collagenase 3 isoform 2 [Pan troglodytes]
          Length = 471

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|355564834|gb|EHH21334.1| hypothetical protein EGK_04368 [Macaca mulatta]
          Length = 572

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/91 (51%), Positives = 53/91 (58%), Gaps = 7/91 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 108 RVRTFPRDSPLGRDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQIDFSKADHNDGYPF 167

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDWM 92
           DGPG  +AHAFFPG     GD HFD DE W 
Sbjct: 168 DGPGGTVAHAFFPGDHHTAGDTHFDDDEAWT 198


>gi|158257854|dbj|BAF84900.1| unnamed protein product [Homo sapiens]
          Length = 471

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|83776610|ref|NP_001032959.1| matrix metalloproteinase-9 precursor [Takifugu rubripes]
 gi|70568314|dbj|BAE06266.1| matrix metalloproteinase-9 [Takifugu rubripes]
          Length = 677

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/74 (52%), Positives = 46/74 (62%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + LTF  + D  ADI+I F K +H D YPFDG   +LAHA+ PG G 
Sbjct: 140 DAFVRAFRVWSDVTPLTFTRLFDGIADIMISFGKTDHGDFYPFDGKDGLLAHAYPPGEGV 199

Query: 80  GGDAHFDIDEDWMV 93
            GDAHFD DE W +
Sbjct: 200 QGDAHFDDDEFWTL 213


>gi|60819972|gb|AAX36519.1| matrix metalloproteinase 13 [synthetic construct]
          Length = 471

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|326914446|ref|XP_003203536.1| PREDICTED: collagenase 3-like [Meleagris gallopavo]
          Length = 512

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 53/101 (52%), Gaps = 8/101 (7%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +    ++A  VWS  + L F  +    ADI+I F  + H D YPFDGP  +LAHAF 
Sbjct: 172 RADVERAFKKAFKVWSDVTPLNFTRIRSGTADIMISFGTKEHGDFYPFDGPSGLLAHAFP 231

Query: 75  PGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           PG   GGDAHFD DE W        +N   G +L L  A E
Sbjct: 232 PGPDYGGDAHFDDDETW--------SNDSRGYNLFLVAAHE 264


>gi|4505209|ref|NP_002418.1| collagenase 3 preproprotein [Homo sapiens]
 gi|1168998|sp|P45452.1|MMP13_HUMAN RecName: Full=Collagenase 3; AltName: Full=Matrix
           metalloproteinase-13; Short=MMP-13; Flags: Precursor
 gi|516386|emb|CAA53056.1| collagenase 3 [Homo sapiens]
 gi|1495425|emb|CAA57108.1| collagenase-3 [Homo sapiens]
 gi|45768659|gb|AAH67522.1| Matrix metalloproteinase 13, preproprotein [Homo sapiens]
 gi|49902384|gb|AAH74807.1| Matrix metalloproteinase 13, preproprotein [Homo sapiens]
 gi|49904782|gb|AAH74808.1| Matrix metallopeptidase 13 (collagenase 3) [Homo sapiens]
 gi|51895762|gb|AAU13907.1| matrix metalloproteinase 13 (collagenase 3) [Homo sapiens]
 gi|119587439|gb|EAW67035.1| matrix metallopeptidase 13 (collagenase 3), isoform CRA_b [Homo
           sapiens]
 gi|313882556|gb|ADR82764.1| matrix metallopeptidase 13 (collagenase 3) (MMP13) [synthetic
           construct]
          Length = 471

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|21465442|pdb|1GKC|A Chain A, Mmp9-inhibitor Complex
 gi|21465443|pdb|1GKC|B Chain B, Mmp9-inhibitor Complex
          Length = 163

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 53/101 (52%), Gaps = 7/101 (6%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 29  RAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 88

Query: 75  PGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           PG G  GDAHFD DE W       S    +G SL L  A E
Sbjct: 89  PGPGIQGDAHFDDDELW-------SLGKGQGYSLFLVAAHE 122


>gi|426370264|ref|XP_004052088.1| PREDICTED: collagenase 3 [Gorilla gorilla gorilla]
          Length = 471

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|81157905|dbj|BAE48203.1| matrix metalloproteinase 9 [Paralichthys olivaceus]
          Length = 267

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 2   TLKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYP 61
           TL + P      +   + D   RA  VWS  + LTF  + +  ADI+I F K +H D YP
Sbjct: 134 TLNYSPDM----ESSLIDDAFARAFKVWSDVTPLTFTRLYEGTADIMISFGKADHGDPYP 189

Query: 62  FDGPGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADEGRRH 119
           FDG   +LAHA+ PG G  GDAHFD DE W +       N    K+L   NAD    H
Sbjct: 190 FDGRNGLLAHAYPPGEGVQGDAHFDDDEHWTL------GNGPAVKTL-YGNADGAMCH 240


>gi|395512107|ref|XP_003760286.1| PREDICTED: matrix metalloproteinase-16-like, partial [Sarcophilus
          harrisii]
          Length = 472

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19 RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
          R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 14 RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 73

Query: 72 AFFPGSGRGGDAHFDIDEDWMV 93
          A+FPG G GGD HFD DE W +
Sbjct: 74 AYFPGPGIGGDTHFDSDEPWTL 95


>gi|29465758|gb|AAL96835.1| matrix metalloproteinase 13 [Ovis aries]
          Length = 174

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 8/99 (8%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
            +    R+A  VWS  + L F  +++  ADI+I F  + H D YPFDGP  +LAHAF PG
Sbjct: 58  EVEKAFRKAFKVWSDVTPLNFTRIHNGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPG 117

Query: 77  SGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
              GGDAHF  DE W         ++ +G +L L  A E
Sbjct: 118 PNYGGDAHFGDDETW--------TSSSKGYNLFLVAAHE 148


>gi|60207592|gb|AAX14804.1| matrix metalloproteinase 3/10a [Notophthalmus viridescens]
          Length = 484

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 44/72 (61%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +RRA  VWS  + LTF  + +  ADI I F    H D YPFDGP   LAHAF PG+  GG
Sbjct: 133 IRRAFKVWSDVTPLTFSRIYEGTADIQISFGAGVHGDFYPFDGPHGTLAHAFAPGNSIGG 192

Query: 82  DAHFDIDEDWMV 93
           DAHFD DE W  
Sbjct: 193 DAHFDEDETWTA 204


>gi|189067481|dbj|BAG37740.1| unnamed protein product [Homo sapiens]
          Length = 471

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSGVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|157817855|ref|NP_001100270.1| matrix metalloproteinase-20 precursor [Rattus norvegicus]
 gi|149020723|gb|EDL78528.1| matrix metalloproteinase 20 (enamelysin) (predicted) [Rattus
           norvegicus]
          Length = 482

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 37/69 (53%), Positives = 41/69 (59%)

Query: 25  ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
           AL  WS    L F  +N   ADI+I FE  +H D YPFDGP   LAHAF PG G GGD H
Sbjct: 144 ALHAWSTAVPLIFVRINSGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTH 203

Query: 85  FDIDEDWMV 93
           FD  E W +
Sbjct: 204 FDNAEKWTM 212


>gi|45768662|gb|AAH67523.1| Matrix metallopeptidase 13 (collagenase 3) [Homo sapiens]
          Length = 471

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|21654707|gb|AAK64605.1| stromelysin-1 [Felis catus]
          Length = 393

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 47/77 (61%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +     +AL  W + + LTF ++ +  AD++I+F   +H D  PFDGPG IL HA+ 
Sbjct: 63  REAVDSAFEKALKAWEEVTPLTFSKIYEGEADVMIFFAVRDHGDFIPFDGPGNILGHAYA 122

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD DE W
Sbjct: 123 PGPGINGDAHFDDDEQW 139


>gi|449472394|ref|XP_002195237.2| PREDICTED: matrix metalloproteinase-15, partial [Taeniopygia
           guttata]
          Length = 473

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 49/90 (54%), Gaps = 8/90 (8%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L FREV            ADI++ F    H D  PFDG G  LAH
Sbjct: 91  EAVRRAFRVWEQATPLVFREVAYEDIRQKRKKEADIMVLFASGFHGDSSPFDGLGGFLAH 150

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD+DE W +     S N
Sbjct: 151 AYFPGPGMGGDTHFDLDEPWTLENADVSGN 180


>gi|27807437|ref|NP_777169.1| matrix metalloproteinase-9 precursor [Bos taurus]
 gi|1705983|sp|P52176.1|MMP9_BOVIN RecName: Full=Matrix metalloproteinase-9; Short=MMP-9; AltName:
           Full=92 kDa gelatinase; AltName: Full=92 kDa type IV
           collagenase; AltName: Full=Gelatinase B; Short=GELB;
           Flags: Precursor
 gi|467621|emb|CAA55127.1| matrix metalloproteinase 9 [Bos taurus]
 gi|148745437|gb|AAI42431.1| Matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa
           type IV collagenase) [Bos taurus]
          Length = 712

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/77 (50%), Positives = 45/77 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLTFTRVYGPEADIVIQFGVREHGDGYPFDGKNGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD +E W
Sbjct: 194 PGKGIQGDAHFDDEELW 210


>gi|440904617|gb|ELR55103.1| Matrix metalloproteinase-9 [Bos grunniens mutus]
          Length = 712

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/77 (50%), Positives = 45/77 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLTFTRVYGPEADIVIQFGVREHGDGYPFDGKNGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD +E W
Sbjct: 194 PGKGIQGDAHFDDEELW 210


>gi|345322985|ref|XP_001510024.2| PREDICTED: matrilysin-like [Ornithorhynchus anatinus]
          Length = 277

 Score = 78.2 bits (191), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 39/77 (50%), Positives = 49/77 (63%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R R+   ++RA ++WS+ + L F+ V    ADI+I F +  H D YPFDG G  LAHAF 
Sbjct: 123 RSRVDFIIKRAFNMWSRVTTLFFKRVYWGPADIIIGFARRYHGDNYPFDGRGNTLAHAFA 182

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG   GGDAHFD DE W
Sbjct: 183 PGPDLGGDAHFDEDEKW 199


>gi|391330624|ref|XP_003739756.1| PREDICTED: matrix metalloproteinase-16-like [Metaseiulus
           occidentalis]
          Length = 578

 Score = 78.2 bits (191), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 9/118 (7%)

Query: 2   TLKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYP 61
           T+  +P+ V   ++ ++  EL +A  VWS H+ LTF      R +I I F    H DG P
Sbjct: 125 TISKYPRSVS--NKAKVEAELAKAFKVWSDHTPLTFTLKKTGRVNIEISFVTGEHGDGDP 182

Query: 62  FDGPGKILAHAFFPGSGRGGDAHFDIDEDWMV-----LGVSRSANADEGKSLELANAD 114
           F GPG  LAHAFFP    GGD HFD  E W +     + + + A  + G SL L+++D
Sbjct: 183 FSGPGGTLAHAFFP--RYGGDIHFDDSEKWTIEEYGGINLFQVAAHEIGHSLGLSHSD 238


>gi|431916544|gb|ELK16522.1| Collagenase 3 [Pteropus alecto]
          Length = 471

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  +++  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHNGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|355786662|gb|EHH66845.1| hypothetical protein EGM_03909, partial [Macaca fascicularis]
          Length = 552

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/91 (51%), Positives = 53/91 (58%), Gaps = 7/91 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 88  RVRTFPRDSPLGRDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQIDFSKADHNDGYPF 147

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDWM 92
           DGPG  +AHAFFPG     GD HFD DE W 
Sbjct: 148 DGPGGTVAHAFFPGDHHTAGDTHFDDDEAWT 178


>gi|327269110|ref|XP_003219338.1| PREDICTED: collagenase 3-like [Anolis carolinensis]
          Length = 473

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 44/70 (62%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            R+A  VWS  + L F  +    ADI+I F ++ H D YPFDGP  +LAHAF PG   GG
Sbjct: 139 FRKAFKVWSDVTPLNFTRIRSGIADIMISFGRKEHGDFYPFDGPSGLLAHAFPPGPNTGG 198

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 199 DAHFDEDELW 208


>gi|326674250|ref|XP_003200101.1| PREDICTED: matrix metalloproteinase-20-like [Danio rerio]
          Length = 490

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/72 (52%), Positives = 45/72 (62%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D +  ALDVW+K S LTF      +ADI++ F  + H D +PFDGP   LAHAF PG G 
Sbjct: 139 DLISSALDVWAKASPLTFLRSYSHQADIMVEFVGKEHGDFFPFDGPDGTLAHAFGPGEGI 198

Query: 80  GGDAHFDIDEDW 91
           GGD HFD  E W
Sbjct: 199 GGDVHFDEAEVW 210


>gi|426370258|ref|XP_004052085.1| PREDICTED: stromelysin-2 [Gorilla gorilla gorilla]
          Length = 476

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     RD     + +AL VW + + LTF  + +  ADI+I F  + H D Y
Sbjct: 112 HLTYRIVNYTPDLPRDAVDSAIEKALKVWEEVTPLTFSRMYEGEADIMISFAVKEHGDFY 171

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG  LAHA+ PG+G  GD HFD DE W
Sbjct: 172 PFDGPGHSLAHAYPPGAGLYGDIHFDDDEKW 202


>gi|3426085|emb|CAA09079.1| matrix metalloproteinase-2 [Equus caballus]
          Length = 114

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 49/80 (61%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VWS  + L F  ++D  ADI+I F +  H DGYPFDG   +LAHAF
Sbjct: 21  DPETVDDAFARAFRVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAF 80

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG G GGD+HFD DE W +
Sbjct: 81  APGPGVGGDSHFDDDELWTL 100


>gi|403262085|ref|XP_003923427.1| PREDICTED: matrix metalloproteinase-26 [Saimiri boliviensis
           boliviensis]
          Length = 258

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 47/74 (63%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           ++D +  A+ +WS  + L F++V ++ ADI I F + +H D +PFDGPG  L HAF P S
Sbjct: 117 VKDSIYNAVSIWSSVTPLVFQQVQNEEADIKISFWQWDHEDCWPFDGPGGFLGHAFLPNS 176

Query: 78  GRGGDAHFDIDEDW 91
           G  G  HFD DE W
Sbjct: 177 GNPGVVHFDKDEHW 190


>gi|118098430|ref|XP_415092.2| PREDICTED: matrix metalloproteinase-17 [Gallus gallus]
          Length = 592

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 12  HYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           H     +R  +  AL VWS  + L F EV  + ADI I F K +H DGYPFDGPG  +AH
Sbjct: 143 HLGHDTVRALMYYALKVWSDITPLNFHEVAGNNADIQIDFSKADHNDGYPFDGPGGTVAH 202

Query: 72  AFFPGS-GRGGDAHFDIDEDWM 92
           AFFPG     GD HFD DE W 
Sbjct: 203 AFFPGDHHTAGDTHFDDDEYWT 224


>gi|68161205|gb|AAY87030.1| matrix metalloproteinase 7 [Equus caballus]
          Length = 110

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 52/84 (61%), Gaps = 3/84 (3%)

Query: 6   HPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGP 65
           HP+ +      +L   + +AL +WS+   L F+ V+   ADI+I F +  H D YPFDGP
Sbjct: 29  HPRELSLVIVNQL---VAKALKMWSEEIPLHFKRVSWGTADIMIGFARGAHGDPYPFDGP 85

Query: 66  GKILAHAFFPGSGRGGDAHFDIDE 89
           G  LAHAF PG G GGDAHFD DE
Sbjct: 86  GNTLAHAFSPGPGLGGDAHFDEDE 109


>gi|336595359|ref|NP_001229632.1| hatching enzyme precursor [Strongylocentrotus purpuratus]
          Length = 598

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 46/107 (42%), Positives = 60/107 (56%), Gaps = 9/107 (8%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRA-DILIYFEKENHWDGYPFDGPGKILAHA 72
           ++  +++E+RRA  VW   S LTFREV D  + DI I F    H DG  FDG G +LAHA
Sbjct: 198 NQNAIKNEIRRAFQVWDDVSGLTFREVVDSSSVDIRIKFGSYEHGDGISFDGQGGVLAHA 257

Query: 73  FFPGSGRGGDAHFDIDEDWMV-----LGVSRSANADEGKSLELANAD 114
           F P   R GDAHFD  E W +       + + A  + G SL L ++D
Sbjct: 258 FLP---RNGDAHFDDSETWTIGTNFGTNLFQVAAHEFGHSLGLYHSD 301


>gi|351702393|gb|EHB05312.1| Matrix metalloproteinase-9 [Heterocephalus glaber]
          Length = 699

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/79 (50%), Positives = 46/79 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VWS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RALIDDAFARAFAVWSAVTPLTFTRVYGRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           PG G  GDAHFD +E W +
Sbjct: 194 PGPGIQGDAHFDDEELWTL 212


>gi|402888173|ref|XP_003907448.1| PREDICTED: matrix metalloproteinase-17 [Papio anubis]
          Length = 521

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/91 (51%), Positives = 53/91 (58%), Gaps = 7/91 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 57  RVRTFPRDSPLGRDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQIDFSKADHNDGYPF 116

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDWM 92
           DGPG  +AHAFFPG     GD HFD DE W 
Sbjct: 117 DGPGGTVAHAFFPGDHHTAGDTHFDDDEAWT 147


>gi|359322991|ref|XP_852332.3| PREDICTED: matrix metalloproteinase-17 [Canis lupus familiaris]
          Length = 648

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/90 (50%), Positives = 51/90 (56%), Gaps = 7/90 (7%)

Query: 9   RVRHYDRGR------LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R        +R  +  AL VWS  + L F EV    ADI I F K +H D YPF
Sbjct: 189 RVRTFPRDSPLGPDTVRALMHYALKVWSDITPLNFHEVAGSAADIQIDFSKADHNDAYPF 248

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GDAHFD DE W
Sbjct: 249 DGPGGTVAHAFFPGDHHTAGDAHFDDDESW 278


>gi|399107609|gb|AFP20376.1| matrix metalloproteinase 9 [Lama glama]
          Length = 709

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/77 (50%), Positives = 46/77 (59%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDVIDDAFARAFALWSAVTPLTFTRVYGREADIVIQFGVREHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG+G  GDAHFD +E W
Sbjct: 194 PGAGIQGDAHFDDEELW 210


>gi|7341370|gb|AAF61270.1|AF244994_1 membrane type-3 matrix metalloproteinase [Scyliorhinus torazame]
          Length = 613

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/79 (50%), Positives = 45/79 (56%), Gaps = 7/79 (8%)

Query: 22  LRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           +RRA DVW   + LTF E+      N  R  DI I F    H D  PFDG G  LAHA+F
Sbjct: 156 IRRAFDVWQNVTPLTFEEIPYVELENKKRDVDITIMFASGFHGDSSPFDGEGGFLAHAYF 215

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           PG G GGD HFD DE W +
Sbjct: 216 PGPGIGGDTHFDSDEPWTL 234


>gi|296216041|ref|XP_002754395.1| PREDICTED: matrix metalloproteinase-20 [Callithrix jacchus]
          Length = 483

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 41/69 (59%)

Query: 25  ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
           AL  WS    L F  +N   ADI++ FE  +H D YPFDGP   LAHAF PG G GGD H
Sbjct: 145 ALQAWSGAVPLNFVRINSGEADIMVSFETGDHGDSYPFDGPRGTLAHAFAPGEGLGGDTH 204

Query: 85  FDIDEDWMV 93
           FD  E W +
Sbjct: 205 FDNAEKWTM 213


>gi|348524749|ref|XP_003449885.1| PREDICTED: collagenase 3-like [Oreochromis niloticus]
          Length = 453

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/70 (52%), Positives = 45/70 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D + +AL VW+K + L F  +    ADI+I F +  H D YPFDGP   LAHAF P +G 
Sbjct: 112 DSIDKALQVWAKVTPLRFTRIYSGIADIMISFGRGAHGDYYPFDGPDGTLAHAFAPSAGI 171

Query: 80  GGDAHFDIDE 89
           GGDAHFD DE
Sbjct: 172 GGDAHFDEDE 181


>gi|8843950|gb|AAF80180.1| matrix metalloproteinase MMP-26 [Homo sapiens]
          Length = 261

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 8/98 (8%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           ++D +  A+ +WS  + L F++V +  ADI + F +  H DG+PFDGPG IL HAF P S
Sbjct: 120 VKDSIYNAVSIWSNVTPLIFQQVQNGDADIKVSFWQWAHEDGWPFDGPGGILGHAFLPNS 179

Query: 78  GRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           G  G  HFD +E W        + +D G +L L    E
Sbjct: 180 GNPGVVHFDKNEHW--------SASDTGYNLFLVATHE 209


>gi|9022385|gb|AAF82359.1|AF248646_1 matrix metalloproteinase-26 precursor [Homo sapiens]
 gi|9837566|gb|AAG00603.1|AF291664_1 matrix metalloproteinase-26 [Homo sapiens]
          Length = 261

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 8/98 (8%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           ++D +  A+ +WS  + L F++V +  ADI + F +  H DG+PFDGPG IL HAF P S
Sbjct: 120 VKDSIYNAVSIWSNVTPLIFQQVQNGDADIKVSFWQWAHEDGWPFDGPGGILGHAFLPNS 179

Query: 78  GRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           G  G  HFD +E W        + +D G +L L    E
Sbjct: 180 GNPGVVHFDKNEHW--------SASDTGYNLFLVATHE 209


>gi|73808266|ref|NP_068573.2| matrix metalloproteinase-26 preproprotein [Homo sapiens]
 gi|13629493|sp|Q9NRE1.2|MMP26_HUMAN RecName: Full=Matrix metalloproteinase-26; Short=MMP-26; AltName:
           Full=Endometase; AltName: Full=Matrilysin-2; Flags:
           Precursor
 gi|9937495|gb|AAG02470.1| matrix metalloproteinase-26 [Homo sapiens]
 gi|10185070|emb|CAC08821.1| matrilysin-2 [Homo sapiens]
 gi|75516560|gb|AAI01544.1| Matrix metallopeptidase 26 [Homo sapiens]
 gi|75517698|gb|AAI01542.1| Matrix metallopeptidase 26 [Homo sapiens]
 gi|119589223|gb|EAW68817.1| matrix metallopeptidase 26 [Homo sapiens]
          Length = 261

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 8/98 (8%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           ++D +  A+ +WS  + L F++V +  ADI + F +  H DG+PFDGPG IL HAF P S
Sbjct: 120 VKDSIYNAVSIWSNVTPLIFQQVQNGDADIKVSFWQWAHEDGWPFDGPGGILGHAFLPNS 179

Query: 78  GRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           G  G  HFD +E W        + +D G +L L    E
Sbjct: 180 GNPGVVHFDKNEHW--------SASDTGYNLFLVATHE 209


>gi|395739860|ref|XP_002819299.2| PREDICTED: matrix metalloproteinase-16-like, partial [Pongo abelii]
          Length = 185

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 90  RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 149

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 150 AYFPGPGIGGDTHFDSDEPWTL 171


>gi|348574175|ref|XP_003472866.1| PREDICTED: collagenase 3-like [Cavia porcellus]
          Length = 471

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  +++  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSSVTPLNFTRLHEGTADIMISFGTKEHGDYYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDEYW--------TDSSKGYNLFLVAAHE 223


>gi|149716438|ref|XP_001500102.1| PREDICTED: matrix metalloproteinase-20-like [Equus caballus]
          Length = 483

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 43/76 (56%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           +   +  AL  WS    L F  V+   ADI+I FE  +H D YPFDGP   LAHAF PG 
Sbjct: 138 VNKAVEMALQAWSSAVPLNFVRVDSGEADIMISFETGDHGDSYPFDGPRGTLAHAFAPGE 197

Query: 78  GRGGDAHFDIDEDWMV 93
           G GGD HFD  E W +
Sbjct: 198 GLGGDTHFDNAEKWTM 213


>gi|60207645|gb|AAX14806.1| collagenase [Notophthalmus viridescens]
          Length = 469

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 47/70 (67%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           ++RAL+VW+  + LTF  + +  ADI I F   +H D  PFDGP  +LAHAF PG G GG
Sbjct: 133 IQRALNVWADVTPLTFTRLYEGTADIQISFAAGDHRDNSPFDGPDGLLAHAFEPGRGIGG 192

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 193 DAHFDEDERW 202


>gi|156536557|gb|ABU80399.1| matrix metalloproteinase 9 [Equus caballus]
          Length = 449

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/77 (50%), Positives = 45/77 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLTFTRVYGPEADIVIQFGVREHGDGYPFDGKNGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD +E W
Sbjct: 194 PGKGIQGDAHFDDEELW 210


>gi|356573414|ref|XP_003554856.1| PREDICTED: metalloendoproteinase 1-like [Glycine max]
          Length = 299

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 3/74 (4%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           +R  ++ AL  W++ S  TF E+    ADI+  F + NH DGYPFDGPG++LAHAF P  
Sbjct: 170 VRQAMQNALQKWAQVSNFTFTEIGRTPADIVYGFHRGNHGDGYPFDGPGRVLAHAFSPQD 229

Query: 78  GRGGDAHFDIDEDW 91
           GR    H+D DE W
Sbjct: 230 GR---LHYDADEQW 240


>gi|291383989|ref|XP_002708607.1| PREDICTED: matrix metalloproteinase 10 [Oryctolagus cuniculus]
          Length = 477

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 53/94 (56%), Gaps = 4/94 (4%)

Query: 2   TLKHHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHW 57
           T  H   R+ +Y     RD     + +AL VW + + LTF   ++  ADI+I F  + H 
Sbjct: 110 TKTHLTYRIVNYTPDLPRDAVDAAIEKALKVWEEVTPLTFSRKHEGEADIMISFAVKEHG 169

Query: 58  DGYPFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           D YPFDGPG  LAHA+ PG G  GD HFD DE W
Sbjct: 170 DFYPFDGPGYSLAHAYPPGPGLYGDVHFDDDEKW 203


>gi|283837835|ref|NP_001164610.1| interstitial collagenase precursor [Oryctolagus cuniculus]
 gi|116855|sp|P13943.1|MMP1_RABIT RecName: Full=Interstitial collagenase; AltName: Full=Matrix
           metalloproteinase-1; Short=MMP-1; Flags: Precursor
 gi|164888|gb|AAB88016.1| collagenase-1 precursor [Oryctolagus cuniculus]
          Length = 468

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHY----DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  + + + +A  +WS  + LTF +V+  +ADI+I F + +H D  
Sbjct: 112 HLTYRIENYTPDLSRADVDNAIEKAFQLWSNVTPLTFTKVSKGQADIMISFVRGDHRDNS 171

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMV----LGVSRSANADEGKSLELANADE 115
           PFDGP   LAHAF PG G GGD HFD D+ W        + R A  + G SL L+++ +
Sbjct: 172 PFDGPEGQLAHAFQPGLGIGGDVHFDEDDRWTKDFRNYNLYRVAAHELGHSLGLSHSTD 230


>gi|147901642|ref|NP_001091305.1| matrix metalloproteinase-9TH precursor [Xenopus laevis]
 gi|119709546|dbj|BAF42673.1| matrix metalloproteinase-9TH [Xenopus laevis]
          Length = 683

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/74 (51%), Positives = 43/74 (58%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + LTF  +     DI I F  ENH D YPFDG   +LAHA+ PG G 
Sbjct: 140 DAFARAFKVWSDVTPLTFTRIYSGEPDINIMFGTENHGDPYPFDGKDGLLAHAYPPGPGM 199

Query: 80  GGDAHFDIDEDWMV 93
            GDAHFD DE W +
Sbjct: 200 QGDAHFDDDEFWTL 213


>gi|392349804|ref|XP_003750476.1| PREDICTED: interstitial collagenase B-like [Rattus norvegicus]
          Length = 393

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/80 (43%), Positives = 47/80 (58%)

Query: 12  HYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           H  R  + D + RA  VWS  + LTF  V ++  DI++ F + +H D Y F+G     AH
Sbjct: 118 HLPRKVVEDAIERAFKVWSDVTPLTFERVFEEEGDIVLSFHQGDHGDLYSFNGSKSHFAH 177

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           AF PG G GGD H+D+DE W
Sbjct: 178 AFPPGPGLGGDVHYDLDETW 197


>gi|124504280|gb|AAI28677.1| Mmp-9th protein [Xenopus laevis]
          Length = 674

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/74 (51%), Positives = 43/74 (58%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + LTF  +     DI I F  ENH D YPFDG   +LAHA+ PG G 
Sbjct: 140 DAFARAFKVWSDVTPLTFTRIYSGEPDINIMFGTENHGDPYPFDGKDGLLAHAYPPGPGM 199

Query: 80  GGDAHFDIDEDWMV 93
            GDAHFD DE W +
Sbjct: 200 QGDAHFDDDEFWTL 213


>gi|15718389|dbj|BAB68366.1| gelatinase [Paralichthys olivaceus]
          Length = 673

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 60/118 (50%), Gaps = 11/118 (9%)

Query: 2   TLKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYP 61
           TL + P      +   + D   RA  VWS  + LTF  + +  ADI+I F K +H D YP
Sbjct: 126 TLNYSPDM----ESSLIDDAFARAFKVWSDVTPLTFTRLYEGTADIMISFGKADHGDPYP 181

Query: 62  FDGPGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADEGRRH 119
           FDG   +LAHA+ PG G  GDAHFD DE W +       N    K+L   NAD    H
Sbjct: 182 FDGRNGLLAHAYPPGEGVQGDAHFDDDEHWTL------GNGPAVKTL-YGNADGAMCH 232


>gi|37589932|gb|AAH40507.2| MMP17 protein [Homo sapiens]
          Length = 606

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/90 (50%), Positives = 51/90 (56%), Gaps = 7/90 (7%)

Query: 9   RVRHYDRGR------LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R        +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 144 RVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSTADIQIDFSKADHNDGYPF 203

Query: 63  DGPGKILAHAFFPG-SGRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 204 DGPGGTVAHAFFPGHHHTAGDTHFDDDEAW 233


>gi|114647860|ref|XP_509485.2| PREDICTED: matrix metalloproteinase-17 [Pan troglodytes]
 gi|410330507|gb|JAA34200.1| matrix metallopeptidase 17 (membrane-inserted) [Pan troglodytes]
          Length = 604

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/90 (50%), Positives = 51/90 (56%), Gaps = 7/90 (7%)

Query: 9   RVRHYDRGR------LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R        +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 141 RVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSTADIQIDFSKADHNDGYPF 200

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 201 DGPGGTVAHAFFPGDHHTAGDTHFDDDEAW 230


>gi|348524753|ref|XP_003449887.1| PREDICTED: collagenase 3-like [Oreochromis niloticus]
          Length = 474

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/66 (56%), Positives = 44/66 (66%)

Query: 24  RALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDA 83
           +AL VW+K + L F+ +    ADI+I F +  H D   FDGPGK LAHAF PG G GGDA
Sbjct: 135 KALQVWAKVTPLKFQRIYSGIADIMISFVRWEHGDYNSFDGPGKTLAHAFAPGDGLGGDA 194

Query: 84  HFDIDE 89
           HFD DE
Sbjct: 195 HFDDDE 200


>gi|340719858|ref|XP_003398362.1| PREDICTED: matrix metalloproteinase-14-like [Bombus terrestris]
          Length = 589

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 7/112 (6%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           K  R+  + ++ DEL +A  VWS+++ L F +    +  I I FEK  H DG PFDGPG 
Sbjct: 134 KYPRNLPQHKVDDELNKAFKVWSEYTDLVFIQKKSGQVHIEIRFEKGEHGDGDPFDGPGG 193

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDWMV-----LGVSRSANADEGKSLELANAD 114
            LAHA+FP    GGDAHFD  E W +       + + A  + G SL L+++D
Sbjct: 194 TLAHAYFP--VYGGDAHFDDAEQWTIDSFRGTNLFQVAAHEFGHSLGLSHSD 243


>gi|449484651|ref|XP_002198005.2| PREDICTED: collagenase 3 [Taeniopygia guttata]
          Length = 459

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDEL----RRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     R+E+    ++A  VWS  + L F  +    ADI+I F  + H D YPFDG
Sbjct: 122 RIMNYTSDLKRNEVDRAFKKAFKVWSDVTPLNFTRIRSGIADIMISFGTKEHGDFYPFDG 181

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           P  +LAHAF PG   GGDAHFD DE W
Sbjct: 182 PSGLLAHAFPPGPDYGGDAHFDDDEVW 208


>gi|157278171|ref|NP_001098185.1| collagenase precursor [Oryzias latipes]
 gi|71361197|dbj|BAE16357.1| collagenase [Oryzias latipes]
          Length = 470

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/70 (48%), Positives = 45/70 (64%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           + + +AL VW++ + L F ++    ADI++ F +  H D YPFDGP   LAHAF P  G 
Sbjct: 129 ESIEKALQVWARVTPLRFTKIYSSTADIMVSFGQRAHGDYYPFDGPDGTLAHAFAPAPGI 188

Query: 80  GGDAHFDIDE 89
           GGDAHFD DE
Sbjct: 189 GGDAHFDDDE 198


>gi|126352506|ref|NP_001075273.1| collagenase 3 precursor [Equus caballus]
 gi|5921828|sp|O18927.1|MMP13_HORSE RecName: Full=Collagenase 3; AltName: Full=Matrix
           metalloproteinase-13; Short=MMP-13; Flags: Precursor
 gi|2641648|gb|AAB86893.1| matrix metalloproteinase 13 [Equus caballus]
          Length = 472

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  + +  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 139 FKKAFKVWSDVTPLNFTRLYNGTADIMISFGTKEHGDFYPFDGPSGLLAHAFPPGPNYGG 198

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 199 DAHFDDDETW--------TSSSKGYNLFLVAAHE 224


>gi|157278511|ref|NP_001098357.1| membrane-type matrix metalloproteinase precursor [Oryzias latipes]
 gi|67077823|dbj|BAD99513.1| membrane-type matrix metalloproteinase [Oryzias latipes]
          Length = 610

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 11/109 (10%)

Query: 1   MTLKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVN--------DDRADILIYFE 52
            +++++  +V  Y+     + +RRA  +W K + L FRE+         +  ADI+I+F 
Sbjct: 124 FSIQNYTPKVGEYE---THEAIRRAFKIWEKVTPLRFREIPYSYIRDKVEKFADIMIFFA 180

Query: 53  KENHWDGYPFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           +  H D  PFDG G  LAHA+FPG G GGD HFD  E W +     S N
Sbjct: 181 EGFHGDSSPFDGEGGFLAHAYFPGDGIGGDTHFDAAEPWTIGNKDLSGN 229


>gi|74138140|dbj|BAE28570.1| unnamed protein product [Mus musculus]
          Length = 479

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 4/89 (4%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +AL VW + + LTF  +++  ADI+I F    H D  
Sbjct: 115 HITYRIVNYTPDLPRQSVDSAIEKALKVWEEVTPLTFSRISEGEADIMISFAVGEHGDFV 174

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDE 89
           PFDGPG +LAHA+ PG G  GDAHFD DE
Sbjct: 175 PFDGPGTVLAHAYAPGPGINGDAHFDDDE 203


>gi|334330413|ref|XP_001366622.2| PREDICTED: matrix metalloproteinase-20-like [Monodelphis domestica]
          Length = 483

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 48/89 (53%), Gaps = 4/89 (4%)

Query: 9   RVRHYDRGRLRDELRRALDV----WSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           RV  Y       E+ +A+D+    WS    L F   N   ADI+I FE  +H D YPFDG
Sbjct: 125 RVSKYTSSMTHAEVDKAVDMALQAWSNAVPLNFVRQNTGEADIMISFEIGDHGDSYPFDG 184

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           P   LAHAF PG G GGD HFD  E W +
Sbjct: 185 PRGTLAHAFAPGEGLGGDTHFDNAEKWTM 213


>gi|189520793|ref|XP_699803.3| PREDICTED: matrix metalloproteinase-24 [Danio rerio]
          Length = 608

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 7/87 (8%)

Query: 22  LRRALDVWSKHSKLTFREV-------NDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           +R+A DVW   + L+F+EV           ADI+I+F    H D  PFDG G  LAHA+F
Sbjct: 150 IRQAFDVWQTVTPLSFQEVAYSEIKNEGKEADIMIFFASGFHGDSSPFDGEGGFLAHAYF 209

Query: 75  PGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           PG G GGD HFD DE W +   +   N
Sbjct: 210 PGPGIGGDTHFDSDEPWTLGNANHDGN 236


>gi|224070919|ref|XP_002187592.1| PREDICTED: matrix metalloproteinase-17 [Taeniopygia guttata]
          Length = 572

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 12  HYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           H     +R  +  AL VWS  + L F EV  + ADI I F K +H DGYPFDGPG  +AH
Sbjct: 122 HLGHDTVRALMYYALKVWSDITPLNFHEVAGNNADIQIDFSKADHNDGYPFDGPGGTVAH 181

Query: 72  AFFPGS-GRGGDAHFDIDEDW 91
           AFFPG     GD HFD DE W
Sbjct: 182 AFFPGDHHTAGDTHFDDDEYW 202


>gi|395829127|ref|XP_003787712.1| PREDICTED: matrix metalloproteinase-9 [Otolemur garnettii]
          Length = 709

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/72 (54%), Positives = 43/72 (59%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF PG G 
Sbjct: 139 DAFARAFAVWSAVTPLTFTRVYGREADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGI 198

Query: 80  GGDAHFDIDEDW 91
            GDAHFD +E W
Sbjct: 199 QGDAHFDDEELW 210


>gi|358022773|gb|AEU03839.1| MMPL2 [Branchiostoma belcheri tsingtauense]
          Length = 494

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 1/81 (1%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++ D + RA DVW+K + LTFR V+   ADI I F   +H DG  FD  G +LAHA+ 
Sbjct: 107 RDQVVDAIARAFDVWAKVTPLTFRRVSGP-ADIEIRFAAGSHGDGNSFDSRGGVLAHAYQ 165

Query: 75  PGSGRGGDAHFDIDEDWMVLG 95
           PG G GGDAHFD  E W + G
Sbjct: 166 PGGGIGGDAHFDESEIWQIGG 186


>gi|18413635|dbj|BAA82707.2| membrane-type-4 matrix metalloproteinase [Homo sapiens]
          Length = 606

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/90 (50%), Positives = 51/90 (56%), Gaps = 7/90 (7%)

Query: 9   RVRHYDRGR------LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R        +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 144 RVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSTADIQIDFSKADHNDGYPF 203

Query: 63  DGPGKILAHAFFPG-SGRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 204 DGPGGTVAHAFFPGHHHTAGDTHFDDDEAW 233


>gi|47215736|emb|CAG05747.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 560

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 8/82 (9%)

Query: 20  DELRRALDVWSKHSKLTFREVN--------DDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +R+A  VW     LTFRE+         D  ADI++ F +  H D  PFDG G  LAH
Sbjct: 135 EAIRKAFKVWESVIPLTFREIPYSQIKNKVDRYADIMLSFAEGFHGDSSPFDGEGGFLAH 194

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           AFFPG+G GGD HFD+ E W V
Sbjct: 195 AFFPGNGIGGDTHFDLAEPWTV 216


>gi|157278499|ref|NP_001098351.1| membrane type-5 matrix metalloproteinase [Oryzias latipes]
 gi|13122278|dbj|BAB32880.1| membrane type-5 matrix metalloproteinase [Oryzias latipes]
          Length = 546

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 7/87 (8%)

Query: 22  LRRALDVWSKHSKLTFREV-------NDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           +R+A  VW   + L+F+EV           ADI+I+F    H D  PFDG G  LAHA+F
Sbjct: 82  IRQAFSVWQMVTPLSFQEVPYSEIKKEGKEADIMIFFASGFHGDSSPFDGEGGFLAHAYF 141

Query: 75  PGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           PG+G GGD HFD DE W +   S   N
Sbjct: 142 PGAGIGGDTHFDSDEPWTLGNPSSDGN 168


>gi|354467447|ref|XP_003496181.1| PREDICTED: stromelysin-2 [Cricetulus griseus]
          Length = 476

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/99 (45%), Positives = 59/99 (59%), Gaps = 6/99 (6%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL VW + + LTF   ++  ADI+I F    H D YPFDGPG+ LAHA+ PG G  G
Sbjct: 134 IEKALKVWEEVTPLTFSRRSEGEADIMISFAAGEHGDFYPFDGPGQSLAHAYPPGPGFYG 193

Query: 82  DAHFDIDEDWMVLGVSRS-----ANADEGKSLELANADE 115
           D HFD DE W  LG S +     A  + G SL L ++D+
Sbjct: 194 DVHFDDDEKW-TLGPSGTNLFLVAAHELGHSLGLFHSDK 231


>gi|328724693|ref|XP_003248223.1| PREDICTED: matrix metalloproteinase-16-like isoform 2
           [Acyrthosiphon pisum]
          Length = 557

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 57/99 (57%), Gaps = 7/99 (7%)

Query: 21  ELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRG 80
           E+R+A DVWS  + LTF      +  I I FEK  H DG PFDGPG  LAHAFFP    G
Sbjct: 142 EIRKAFDVWSDVTPLTFTHKKSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAFFP--VYG 199

Query: 81  GDAHFDIDEDWMV-----LGVSRSANADEGKSLELANAD 114
           GDAHFD  E W +       + + A  + G SL L+++D
Sbjct: 200 GDAHFDDSEKWSIGSFKGTNLFQVAAHEFGHSLGLSHSD 238


>gi|345320747|ref|XP_003430339.1| PREDICTED: matrilysin-like [Ornithorhynchus anatinus]
          Length = 232

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 45/68 (66%)

Query: 24  RALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDA 83
           RAL VWS  + L F+ ++D  AD+ I F +  H DG+ FDGPG ILAHAF PG   GGD 
Sbjct: 128 RALSVWSDVTPLMFQRIDDQEADMDIAFWRGAHGDGFSFDGPGNILAHAFAPGPDIGGDV 187

Query: 84  HFDIDEDW 91
           HFD +E W
Sbjct: 188 HFDGEEPW 195


>gi|354476728|ref|XP_003500575.1| PREDICTED: matrix metalloproteinase-9 [Cricetulus griseus]
 gi|344241579|gb|EGV97682.1| Matrix metalloproteinase-9 [Cricetulus griseus]
          Length = 710

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 45/77 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VWS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 135 RDVIDDAFARAFAVWSAVTPLTFTRVYGLEADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 194

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD +E W
Sbjct: 195 PGPGIQGDAHFDDEELW 211


>gi|112382270|ref|NP_057239.4| matrix metalloproteinase-17 preproprotein [Homo sapiens]
 gi|296439485|sp|Q9ULZ9.4|MMP17_HUMAN RecName: Full=Matrix metalloproteinase-17; Short=MMP-17; AltName:
           Full=Membrane-type matrix metalloproteinase 4;
           Short=MT-MMP 4; Short=MTMMP4; AltName:
           Full=Membrane-type-4 matrix metalloproteinase;
           Short=MT4-MMP; Short=MT4MMP; Flags: Precursor
          Length = 603

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/90 (50%), Positives = 51/90 (56%), Gaps = 7/90 (7%)

Query: 9   RVRHYDRGR------LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R        +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 141 RVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQIDFSKADHNDGYPF 200

Query: 63  DGPGKILAHAFFPG-SGRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 201 DGPGGTVAHAFFPGHHHTAGDTHFDDDEAW 230


>gi|19424154|ref|NP_598198.1| stromelysin-2 precursor [Rattus norvegicus]
 gi|116870|sp|P07152.1|MMP10_RAT RecName: Full=Stromelysin-2; Short=SL-2; AltName: Full=Matrix
           metalloproteinase-10; Short=MMP-10; AltName:
           Full=Transformation-associated protein 34A; AltName:
           Full=Transin-2; Flags: Precursor
 gi|57389|emb|CAA28739.1| unnamed protein product [Rattus norvegicus]
 gi|207151|gb|AAA42202.1| transformation-associated protein [Rattus norvegicus]
          Length = 476

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 48/77 (62%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +   + RAL VW + + LTF  +++  ADI+I F    H D YPFDG G+ LAHA+ 
Sbjct: 127 RESVDSAIERALKVWEEVTPLTFSRISEGEADIMISFAVGEHGDFYPFDGVGQSLAHAYP 186

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD DE W
Sbjct: 187 PGPGFYGDAHFDDDEKW 203


>gi|328724691|ref|XP_001949484.2| PREDICTED: matrix metalloproteinase-16-like isoform 1
           [Acyrthosiphon pisum]
          Length = 547

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 57/99 (57%), Gaps = 7/99 (7%)

Query: 21  ELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRG 80
           E+R+A DVWS  + LTF      +  I I FEK  H DG PFDGPG  LAHAFFP    G
Sbjct: 142 EIRKAFDVWSDVTPLTFTHKKSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAFFP--VYG 199

Query: 81  GDAHFDIDEDWMV-----LGVSRSANADEGKSLELANAD 114
           GDAHFD  E W +       + + A  + G SL L+++D
Sbjct: 200 GDAHFDDSEKWSIGSFKGTNLFQVAAHEFGHSLGLSHSD 238


>gi|345328951|ref|XP_001508107.2| PREDICTED: matrix metalloproteinase-15 [Ornithorhynchus anatinus]
          Length = 536

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L FRE+            ADI++ F    H D  PFDG G  LAH
Sbjct: 149 EAVRRAFRVWEQATPLVFREIPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGVGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGDAHFD +E W
Sbjct: 209 AYFPGPGMGGDAHFDAEEPW 228


>gi|432117219|gb|ELK37652.1| Matrix metalloproteinase-16 [Myotis davidii]
          Length = 539

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 81  RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 140

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 141 AYFPGPGIGGDTHFDSDEPWTL 162


>gi|21465444|pdb|1GKD|A Chain A, Mmp9 Active Site Mutant-Inhibitor Complex
 gi|21465445|pdb|1GKD|B Chain B, Mmp9 Active Site Mutant-Inhibitor Complex
          Length = 163

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 53/101 (52%), Gaps = 7/101 (6%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 29  RAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 88

Query: 75  PGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           PG G  GDAHFD DE W       S    +G SL L  A +
Sbjct: 89  PGPGIQGDAHFDDDELW-------SLGKGQGYSLFLVAAHQ 122


>gi|149020726|gb|EDL78531.1| rCG31835 [Rattus norvegicus]
          Length = 476

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 48/77 (62%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +   + RAL VW + + LTF  +++  ADI+I F    H D YPFDG G+ LAHA+ 
Sbjct: 127 RESVDSAIERALKVWEEVTPLTFSRISEGEADIMISFAVGEHGDFYPFDGVGQSLAHAYP 186

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD DE W
Sbjct: 187 PGPGFYGDAHFDDDEKW 203


>gi|3646295|emb|CAA61753.1| MT4-MMP [Homo sapiens]
 gi|119618934|gb|EAW98528.1| matrix metallopeptidase 17 (membrane-inserted) [Homo sapiens]
          Length = 519

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/91 (49%), Positives = 51/91 (56%), Gaps = 7/91 (7%)

Query: 9   RVRHYDRGR------LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R        +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 57  RVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSTADIQIDFSKADHNDGYPF 116

Query: 63  DGPGKILAHAFFPG-SGRGGDAHFDIDEDWM 92
           DGPG  +AHAFFPG     GD HFD DE W 
Sbjct: 117 DGPGGTVAHAFFPGHHHTAGDTHFDDDEAWT 147


>gi|328724695|ref|XP_003248224.1| PREDICTED: matrix metalloproteinase-16-like isoform 3
           [Acyrthosiphon pisum]
          Length = 583

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 57/99 (57%), Gaps = 7/99 (7%)

Query: 21  ELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRG 80
           E+R+A DVWS  + LTF      +  I I FEK  H DG PFDGPG  LAHAFFP    G
Sbjct: 142 EIRKAFDVWSDVTPLTFTHKKSGQVHIEIRFEKGEHGDGDPFDGPGGTLAHAFFP--VYG 199

Query: 81  GDAHFDIDEDWMV-----LGVSRSANADEGKSLELANAD 114
           GDAHFD  E W +       + + A  + G SL L+++D
Sbjct: 200 GDAHFDDSEKWSIGSFKGTNLFQVAAHEFGHSLGLSHSD 238


>gi|297683235|ref|XP_002819295.1| PREDICTED: matrix metalloproteinase-16, partial [Pongo abelii]
          Length = 470

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19 RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
          R  +RRALDVW   +  TF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 11 RKAIRRALDVWQNVTPPTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 70

Query: 72 AFFPGSGRGGDAHFDIDEDWMV 93
          A+FPG G GGD HFD DE W +
Sbjct: 71 AYFPGPGIGGDTHFDSDEPWTL 92


>gi|395743423|ref|XP_003777921.1| PREDICTED: uncharacterized protein LOC100462632 [Pongo abelii]
          Length = 992

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  +++  ADI+I F  + H D YPFDGP  +LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHNGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223



 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 4/89 (4%)

Query: 9   RVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     R++    +R+A  VWS  + L F +++   ADIL+ F +  H D + FDG
Sbjct: 639 RINNYTPDMNREDVDYAIRKAFQVWSNVTPLKFSKIHTGVADILVVFARGAHGDFHAFDG 698

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
            G ILAHAF PGSG GGDAHFD DE W  
Sbjct: 699 KGGILAHAFGPGSGIGGDAHFDEDEFWTT 727


>gi|416552|emb|CAA46638.1| hatching enzyme [Paracentrotus lividus]
          Length = 587

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/76 (52%), Positives = 47/76 (61%), Gaps = 4/76 (5%)

Query: 19  RDELRRALDVWSKHSKLTFREVNDDRA-DILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           +DE+RRA  VW   S L+FREV D  + DI I F   +H DG  FDG G +LAHAF P  
Sbjct: 197 KDEIRRAFRVWDDVSGLSFREVPDTTSVDIRIKFGSYDHGDGISFDGRGGVLAHAFLP-- 254

Query: 78  GRGGDAHFDIDEDWMV 93
            R GDAHFD  E W +
Sbjct: 255 -RNGDAHFDDSETWTI 269


>gi|47202237|emb|CAF87535.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 279

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 8/82 (9%)

Query: 20  DELRRALDVWSKHSKLTFREVN--------DDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +R+A  VW     LTFRE+         D  ADI++ F +  H D  PFDG G  LAH
Sbjct: 135 EAIRKAFKVWESVIPLTFREIPYSQIKNKVDRYADIMLSFAEGFHGDSSPFDGEGGFLAH 194

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           AFFPG+G GGD HFD+ E W V
Sbjct: 195 AFFPGNGIGGDTHFDLAEPWTV 216


>gi|167427311|gb|ABZ80287.1| olfactory receptor, family 51, subfamily L, member 1 (predicted)
           [Callithrix jacchus]
          Length = 504

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/74 (44%), Positives = 46/74 (62%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           ++D +  A+ +WS  + L F++V ++ ADI I F + +H D +PFDGPG  L HAF P S
Sbjct: 50  VKDSIYNAVSIWSSVTSLIFQQVQNEDADIKISFWQWDHDDCWPFDGPGGFLGHAFLPNS 109

Query: 78  GRGGDAHFDIDEDW 91
              G  HFD DE W
Sbjct: 110 ENPGVVHFDKDEHW 123


>gi|148673639|gb|EDL05586.1| matrix metallopeptidase 16, isoform CRA_b [Mus musculus]
          Length = 448

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 182 RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 241

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 242 AYFPGPGIGGDTHFDSDEPWTL 263


>gi|170030728|ref|XP_001843240.1| matrix metalloproteinase [Culex quinquefasciatus]
 gi|167867916|gb|EDS31299.1| matrix metalloproteinase [Culex quinquefasciatus]
          Length = 586

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 2/72 (2%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFP--GSGR 79
           +++A + W+++S L F  V D  ADI++ F   +H D YPFDGPG ILAHAF+P   +  
Sbjct: 160 MQKAFNEWARYSNLRFVRVYDPSADIIVGFGSGHHGDNYPFDGPGNILAHAFYPYEMASY 219

Query: 80  GGDAHFDIDEDW 91
           GGD HFD DE+W
Sbjct: 220 GGDIHFDEDENW 231


>gi|18158443|ref|NP_542954.1| matrix metalloproteinase-16 precursor [Rattus norvegicus]
 gi|2424973|dbj|BAA22223.1| MT3-MMP-del [Rattus sp.]
          Length = 547

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 149 RRAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDRSPFDGEGGFLAH 208

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 209 AYFPGPGIGGDTHFDSDEPWTL 230


>gi|318065779|ref|NP_001187157.1| matrix metalloproteinase-9 precursor [Ictalurus punctatus]
 gi|98990173|gb|ABF60144.1| matrix metalloproteinase 9 [Ictalurus punctatus]
          Length = 686

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/80 (47%), Positives = 47/80 (58%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VW   + LTF  + +  ADI+I F K +H D YPFDG   +LAHA+
Sbjct: 134 DASVIDDAFARAFKVWRDVTPLTFTRLYNGIADIMILFGKRDHGDPYPFDGKDGLLAHAY 193

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG G  GDAHFD DE W +
Sbjct: 194 PPGEGVQGDAHFDDDEYWTL 213


>gi|301785385|ref|XP_002928103.1| PREDICTED: matrix metalloproteinase-9-like [Ailuropoda melanoleuca]
 gi|281346395|gb|EFB21979.1| hypothetical protein PANDA_018019 [Ailuropoda melanoleuca]
          Length = 704

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/77 (50%), Positives = 45/77 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RNVIDDAFARAFALWSAVTPLTFTRVYGPEADIVIQFGVREHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD +E W
Sbjct: 194 PGQGIQGDAHFDDEELW 210


>gi|150261347|pdb|2OVX|A Chain A, Mmp-9 Active Site Mutant With Barbiturate Inhibitor
 gi|150261348|pdb|2OVX|B Chain B, Mmp-9 Active Site Mutant With Barbiturate Inhibitor
 gi|150261349|pdb|2OVZ|A Chain A, Mmp-9 Active Site Mutant With Phosphinate Inhibitor
 gi|150261350|pdb|2OVZ|B Chain B, Mmp-9 Active Site Mutant With Phosphinate Inhibitor
 gi|150261351|pdb|2OW0|A Chain A, Mmp-9 Active Site Mutant With Iodine-Labeled Carboxylate
           Inhibitor
 gi|150261352|pdb|2OW0|B Chain B, Mmp-9 Active Site Mutant With Iodine-Labeled Carboxylate
           Inhibitor
 gi|150261353|pdb|2OW1|A Chain A, Mmp-9 Active Site Mutant With Trifluoromethyl Hydroxamate
           Inhibitor
 gi|150261354|pdb|2OW1|B Chain B, Mmp-9 Active Site Mutant With Trifluoromethyl Hydroxamate
           Inhibitor
 gi|150261355|pdb|2OW2|A Chain A, Mmp-9 Active Site Mutant With Difluoro Butanoic Acid
           Inhibitor
 gi|150261356|pdb|2OW2|B Chain B, Mmp-9 Active Site Mutant With Difluoro Butanoic Acid
           Inhibitor
          Length = 159

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 53/101 (52%), Gaps = 7/101 (6%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 25  RAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 84

Query: 75  PGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           PG G  GDAHFD DE W       S    +G SL L  A +
Sbjct: 85  PGPGIQGDAHFDDDELW-------SLGKGQGYSLFLVAAHQ 118


>gi|47228071|emb|CAF97700.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 549

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 11/101 (10%)

Query: 1   MTLKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVN--------DDRADILIYFE 52
            +++++  +V  Y+     + +R+A  VW   + L FRE+         ++ ADI+I+F 
Sbjct: 92  FSIQNYTPKVGEYET---YEAIRKAFKVWESVTPLRFREIPYSYIRDKVEEFADIMIFFS 148

Query: 53  KENHWDGYPFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           +  H D  PFDG G  LAHA+FPG+G GGD HFD  E W V
Sbjct: 149 EGFHGDSSPFDGEGGFLAHAYFPGNGIGGDTHFDAAEPWTV 189


>gi|47168806|pdb|1RM8|A Chain A, Crystal Structure Of The Catalytic Domain Of Mmp-16MT3-
           Mmp: Characterization Of Mt-Mmp Specific Features
          Length = 169

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 46/82 (56%), Gaps = 7/82 (8%)

Query: 19  RDELRRALDVWSKHSKLTFREV------NDDR-ADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +RRA DVW   + LTF EV      N  R  DI I F    H D  PFDG G  LAH
Sbjct: 26  RKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAH 85

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 86  AYFPGPGIGGDTHFDSDEPWTL 107


>gi|410925328|ref|XP_003976133.1| PREDICTED: collagenase 3-like [Takifugu rubripes]
 gi|386799503|gb|AFJ38182.1| matrix metalloproteinase [Takifugu rubripes]
          Length = 474

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/89 (46%), Positives = 52/89 (58%), Gaps = 5/89 (5%)

Query: 5   HHPKRVRHYDR----GRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y        +   + +AL VW+K + L F +V+ D  DI + F  + H D Y
Sbjct: 114 HLTYRIENYSPDMSVAEIEQSIDKALQVWAKVTPLRFSKVSSD-PDIKVLFGGQYHGDSY 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDE 89
           PFDGP  ILAHAF PG G GGDAHFD DE
Sbjct: 173 PFDGPDGILAHAFSPGPGIGGDAHFDEDE 201


>gi|449279334|gb|EMC86969.1| Matrix metalloproteinase-17, partial [Columba livia]
          Length = 463

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/81 (51%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 12  HYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           H     +R  +  AL VWS  + L F EV  + ADI I F K +H DGYPFDGPG  +AH
Sbjct: 97  HLGHDTVRALMYYALKVWSDITPLNFHEVAGNNADIQIDFSKADHNDGYPFDGPGGTVAH 156

Query: 72  AFFPGS-GRGGDAHFDIDEDW 91
           AFFPG     GD HFD DE W
Sbjct: 157 AFFPGDHHTAGDTHFDDDEYW 177


>gi|327269122|ref|XP_003219344.1| PREDICTED: matrix metalloproteinase-20-like [Anolis carolinensis]
          Length = 484

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 9   RVRHYDRGRLRDELRRALDV----WSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           RV+ Y       E+ +A+++    WS  + L F +     ADI+I FE  +H D YPFDG
Sbjct: 123 RVKKYTPSLSHAEVDKAVEMGLKAWSAAAPLNFVKTTSGEADIMISFENGDHGDSYPFDG 182

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           P   LAHAF PG G GGD HFD  E W +
Sbjct: 183 PRGTLAHAFAPGEGLGGDTHFDNAEKWTM 211


>gi|13122276|dbj|BAB32879.1| membrane type-5 matrix metalloproteinase-variant [Oryzias latipes]
          Length = 431

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 2   TLKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREV-------NDDRADILIYFEKE 54
           ++ ++  +V   D  R    +R+A  VW   + L+F+EV           ADI+I+F   
Sbjct: 65  SISNYTPKVGQKDTQR---AIRQAFSVWQMVTPLSFQEVPYSEIKKEGKEADIMIFFASG 121

Query: 55  NHWDGYPFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
            H D  PFDG G  LAHA+FPG+G GGD HFD DE W +   S   N
Sbjct: 122 FHGDSSPFDGEGGFLAHAYFPGAGIGGDTHFDSDEPWTLGNPSSDGN 168


>gi|395520413|ref|XP_003764327.1| PREDICTED: matrix metalloproteinase-20 [Sarcophilus harrisii]
          Length = 483

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 48/89 (53%), Gaps = 4/89 (4%)

Query: 9   RVRHYDRGRLRDELRRALDV----WSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           RV  Y       E+ +A+D+    WS    L F   N   ADI+I FE  +H D YPFDG
Sbjct: 125 RVSKYTSSMSHAEVDKAVDMALQAWSNAVPLNFVRQNTGEADIMISFELGDHGDSYPFDG 184

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           P   LAHAF PG G GGD HFD  E W +
Sbjct: 185 PRGTLAHAFAPGEGLGGDTHFDNAEKWTM 213


>gi|403183464|gb|EJY58116.1| AAEL017046-PA, partial [Aedes aegypti]
          Length = 267

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 64/118 (54%), Gaps = 12/118 (10%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           +  +P R+   DR  +  E+ +A  VWS+++ LTF         I I FE   H DG PF
Sbjct: 131 ISKYPSRL---DRAEVDKEIAKAFSVWSEYTDLTFTAKKSAPVHIDIRFEVNEHGDGDPF 187

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSANADE------GKSLELANAD 114
           DGPG  LAHA+FP    GGDAHFD  E W + G SR  N  +      G SL L+++D
Sbjct: 188 DGPGGTLAHAYFP--VYGGDAHFDDAEFWTI-GKSRGTNLFQVAAHEFGHSLGLSHSD 242


>gi|345800008|ref|XP_546546.3| PREDICTED: LOW QUALITY PROTEIN: interstitial collagenase [Canis
           lupus familiaris]
          Length = 468

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 8/119 (6%)

Query: 5   HHPKRVRHYD----RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     R  +   + +A  +WS  S LTF +V + +ADI+I F   +H D  
Sbjct: 112 HLTYRIENYTPDLPRAEVDSAIEKAFQLWSNVSPLTFTKVFEGQADIMISFVWGDHRDNS 171

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADE 115
           PFDGP   LAHAF PG   GGD HFD DE W        + R A  + G SL L+++ +
Sbjct: 172 PFDGPNGNLAHAFQPGPNLGGDIHFDEDETWTNNFRNYNLYRVAAHELGHSLGLSHSTD 230


>gi|260799971|ref|XP_002594910.1| hypothetical protein BRAFLDRAFT_110778 [Branchiostoma floridae]
 gi|229280148|gb|EEN50921.1| hypothetical protein BRAFLDRAFT_110778 [Branchiostoma floridae]
          Length = 576

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDR-ADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           +R E+RRA  +WS ++ L FR +     +DI I F   +H DG+ FDGPGK LAHA+ PG
Sbjct: 213 VRREIRRAQKMWSAYTPLRFRRLTGSTPSDIEISFASFHHGDGHSFDGPGKTLAHAYGPG 272

Query: 77  SGRGGDAHFDIDEDWMV 93
           +G GGD HFD  E W +
Sbjct: 273 NGIGGDVHFDESETWTI 289


>gi|293348995|ref|XP_001072313.2| PREDICTED: interstitial collagenase B [Rattus norvegicus]
 gi|293360883|ref|XP_235849.3| PREDICTED: interstitial collagenase B [Rattus norvegicus]
          Length = 460

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/80 (43%), Positives = 47/80 (58%)

Query: 12  HYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           H  R  + D + RA  VWS  + LTF  V ++  DI++ F + +H D Y F+G     AH
Sbjct: 118 HLPRKVVEDAIERAFKVWSDVTPLTFERVFEEEGDIVLSFHQGDHGDLYSFNGSKSHFAH 177

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           AF PG G GGD H+D+DE W
Sbjct: 178 AFPPGPGLGGDVHYDLDETW 197


>gi|332254133|ref|XP_003276184.1| PREDICTED: matrix metalloproteinase-17 [Nomascus leucogenys]
          Length = 607

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/90 (51%), Positives = 53/90 (58%), Gaps = 7/90 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV    ADI I F + +H DGYPF
Sbjct: 141 RVRTFPRDSPLGRDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQIDFSRADHNDGYPF 200

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 201 DGPGGTVAHAFFPGDHHTAGDTHFDDDEAW 230


>gi|149020731|gb|EDL78536.1| rCG64123 [Rattus norvegicus]
          Length = 418

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/80 (43%), Positives = 47/80 (58%)

Query: 12  HYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           H  R  + D + RA  VWS  + LTF  V ++  DI++ F + +H D Y F+G     AH
Sbjct: 76  HLPRKVVEDAIERAFKVWSDVTPLTFERVFEEEGDIVLSFHQGDHGDLYSFNGSKSHFAH 135

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           AF PG G GGD H+D+DE W
Sbjct: 136 AFPPGPGLGGDVHYDLDETW 155


>gi|260793187|ref|XP_002591594.1| hypothetical protein BRAFLDRAFT_252628 [Branchiostoma floridae]
 gi|229276802|gb|EEN47605.1| hypothetical protein BRAFLDRAFT_252628 [Branchiostoma floridae]
          Length = 171

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/108 (41%), Positives = 58/108 (53%), Gaps = 7/108 (6%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
            R R+     LR  + R+L +W+  + LTFREV +  ADI+  F + +H DG+PFDG G 
Sbjct: 14  NRPRYISEKELRRVILRSLKLWTDVTPLTFREVVNGDADIMFEFHRGDHNDGHPFDGLGG 73

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           I AHAFFP     GD H+D DE W     + S      K L L  A E
Sbjct: 74  IFAHAFFP---ENGDVHYDADEPW----TTDSRYTSSKKDLFLITAHE 114


>gi|383757674|ref|YP_005436659.1| putative M10A family peptidase [Rubrivivax gelatinosus IL144]
 gi|381378343|dbj|BAL95160.1| putative M10A family peptidase [Rubrivivax gelatinosus IL144]
          Length = 633

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 4/85 (4%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVN-DDRADILIYFEKENHWDGYPFDGPGKILAHA 72
           D  + R  +R ALD+W+  + LTF EV+  +  D +I F   +H DG PFDG G++LAHA
Sbjct: 137 DSNQARGAVRAALDLWANVTSLTFTEVSATNNPDFIIRFVAGDHGDGSPFDGVGRVLAHA 196

Query: 73  FFP---GSGRGGDAHFDIDEDWMVL 94
           ++P   G G  GDAHFD  E W V+
Sbjct: 197 YYPPPAGGGLAGDAHFDESETWTVI 221


>gi|6678900|ref|NP_032635.1| matrix metalloproteinase-15 precursor [Mus musculus]
 gi|12585269|sp|O54732.1|MMP15_MOUSE RecName: Full=Matrix metalloproteinase-15; Short=MMP-15; AltName:
           Full=Membrane-type matrix metalloproteinase 2;
           Short=MT-MMP 2; Short=MTMMP2; AltName:
           Full=Membrane-type-2 matrix metalloproteinase;
           Short=MT2-MMP; Short=MT2MMP; Flags: Precursor
 gi|2662366|dbj|BAA23667.1| membrane type-2 matrix metalloproteinase [Mus musculus]
 gi|34784408|gb|AAH57952.1| Matrix metallopeptidase 15 [Mus musculus]
 gi|55777344|gb|AAH47278.1| Matrix metallopeptidase 15 [Mus musculus]
          Length = 657

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREVNDD--------RADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV+ D         ADI++ F    H D  PFDG G  LAH
Sbjct: 158 EAVRRAFQVWEQVTPLVFQEVSYDDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAH 217

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGD HFD DE W
Sbjct: 218 AYFPGPGLGGDTHFDADEPW 237


>gi|157278505|ref|NP_001098354.1| membrane-type matrix metalloproteinase precursor [Oryzias latipes]
 gi|46359591|dbj|BAD15298.1| membrane-type matrix metalloproteinase [Oryzias latipes]
          Length = 607

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/84 (46%), Positives = 44/84 (52%), Gaps = 7/84 (8%)

Query: 17  RLRDELRRALDVWSKHSKLTFREV-------NDDRADILIYFEKENHWDGYPFDGPGKIL 69
           +  D +RRA DVW K + L F  V            DI I F    H D  PFDG G  L
Sbjct: 145 KTHDAIRRAFDVWQKVTPLRFEAVPYNELQRTKKDVDITIIFASGFHGDSSPFDGEGGFL 204

Query: 70  AHAFFPGSGRGGDAHFDIDEDWMV 93
           AHA+FPG G GGD HFD DE W +
Sbjct: 205 AHAYFPGPGIGGDTHFDSDEPWTL 228


>gi|75677470|ref|NP_001028511.1| matrix metalloproteinase-25 precursor [Mus musculus]
 gi|123796969|sp|Q3U435.1|MMP25_MOUSE RecName: Full=Matrix metalloproteinase-25; Short=MMP-25; Flags:
           Precursor
 gi|74181785|dbj|BAE32600.1| unnamed protein product [Mus musculus]
 gi|109730167|gb|AAI12380.1| Matrix metallopeptidase 25 [Mus musculus]
          Length = 615

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 3/77 (3%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDD--RADILIYFEKENHWDGYPFDGPGKILAHAFFP 75
           +R  L  AL VW+  S LTF+EVN      DI+I+F +  H D YPFDG G  LAHAFFP
Sbjct: 193 VRTLLSYALAVWATESGLTFQEVNSQYQEPDIIIHFARAYHQDSYPFDGSGGTLAHAFFP 252

Query: 76  GSGR-GGDAHFDIDEDW 91
           G     GD HFD +E W
Sbjct: 253 GEHPISGDTHFDDEETW 269


>gi|260799306|ref|XP_002594638.1| hypothetical protein BRAFLDRAFT_264495 [Branchiostoma floridae]
 gi|229279873|gb|EEN50649.1| hypothetical protein BRAFLDRAFT_264495 [Branchiostoma floridae]
          Length = 498

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 8/100 (8%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           + + RA  +W + + LTF  V + RADI+I F    H DG PFDGPG  LAHAFFP    
Sbjct: 106 EAITRAFQLWQEQTPLTFTRVTN-RADIVIKFAPIEHGDGAPFDGPGGTLAHAFFPQF-- 162

Query: 80  GGDAHFDIDEDWMVLGVS-----RSANADEGKSLELANAD 114
           GGDAHFD  E W V   S     + A  + G SL L++++
Sbjct: 163 GGDAHFDESEQWTVRTSSGTNLLQVAAHEFGHSLGLSHSE 202


>gi|344289187|ref|XP_003416326.1| PREDICTED: matrix metalloproteinase-15 [Loxodonta africana]
          Length = 671

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 47/90 (52%), Gaps = 8/90 (8%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + LRRA  VW + + L F EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 162 EALRRAFHVWEQATPLVFEEVPYEDIRRQRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 221

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +     + N
Sbjct: 222 AYFPGPGMGGDTHFDADEPWTLSNTDVNGN 251


>gi|50950195|ref|NP_001002967.1| stromelysin-1 precursor [Canis lupus familiaris]
 gi|62900543|sp|Q6Y4Q5.1|MMP3_CANFA RecName: Full=Stromelysin-1; Short=SL-1; AltName: Full=Matrix
           metalloproteinase-3; Short=MMP-3; Flags: Precursor
 gi|34391862|gb|AAO63580.1| stromelysin 1 [Canis lupus familiaris]
          Length = 478

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     RD     + +AL+VW + + LTF   ++  ADI I F   +H D  
Sbjct: 113 HLTYRIMNYTPDLPRDAVDSAIEKALNVWKEVTPLTFSRTDEGEADIKISFAVRDHGDFN 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG +L HA+ PG G  GDAHFD DE W
Sbjct: 173 PFDGPGNVLGHAYPPGPGIYGDAHFDDDEQW 203


>gi|405975214|gb|EKC39795.1| Matrix metalloproteinase-19 [Crassostrea gigas]
          Length = 442

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/108 (44%), Positives = 58/108 (53%), Gaps = 8/108 (7%)

Query: 9   RVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKI 68
           R     + + R     A + WS  S L FREV    ADI+I F++ +H DG PFDG    
Sbjct: 122 RTNPLSQSQHRRAFINAFNKWSSVSPLRFREVASGDADIIIDFKRYDHGDGSPFDGRSGT 181

Query: 69  LAHAFFPG-SGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           LAHAFFPG S   GD HFD DE W  +G S      EG +LE+  A E
Sbjct: 182 LAHAFFPGTSAISGDTHFDDDEKW-TMGTS------EGTNLEIVAAHE 222


>gi|432894409|ref|XP_004075979.1| PREDICTED: matrix metalloproteinase-20-like [Oryzias latipes]
          Length = 521

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 44/67 (65%)

Query: 25  ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
           AL +W + + L F +V    ADI++ F ++ H D +PFDGPG +LAHAF PG   GGD H
Sbjct: 144 ALKMWREAAPLRFTQVTSGSADIVLTFARKTHGDFFPFDGPGGVLAHAFQPGERMGGDVH 203

Query: 85  FDIDEDW 91
           FD DE W
Sbjct: 204 FDEDETW 210


>gi|301610871|ref|XP_002934976.1| PREDICTED: matrix metalloproteinase-18-like [Xenopus (Silurana)
           tropicalis]
          Length = 481

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     R+++ RA++    VWS    LTF  + D  +DI + F   +H D  PFDG
Sbjct: 136 RILNYTPDMTRNDVDRAIEKAFKVWSDVVPLTFTRIYDRVSDIEMLFAYRDHKDSLPFDG 195

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           P  ILAHAF PG   GGD HFD DE W
Sbjct: 196 PSGILAHAFAPGDNIGGDVHFDEDERW 222


>gi|157110775|ref|XP_001651241.1| matrix metalloproteinase [Aedes aegypti]
 gi|108878613|gb|EAT42838.1| AAEL005666-PA [Aedes aegypti]
          Length = 573

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 64/118 (54%), Gaps = 12/118 (10%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           +  +P R+   DR  +  E+ +A  VWS+++ LTF         I I FE   H DG PF
Sbjct: 129 ISKYPSRL---DRAEVDKEIAKAFSVWSEYTDLTFTAKKSAPVHIDIRFEVNEHGDGDPF 185

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSANADE------GKSLELANAD 114
           DGPG  LAHA+FP    GGDAHFD  E W + G SR  N  +      G SL L+++D
Sbjct: 186 DGPGGTLAHAYFP--VYGGDAHFDDAEFWTI-GKSRGTNLFQVAAHEFGHSLGLSHSD 240


>gi|123090|sp|P22757.1|HE_PARLI RecName: Full=Hatching enzyme; Short=HE; Short=HEZ; AltName:
           Full=Envelysin; AltName: Full=Sea-urchin-hatching
           proteinase; Contains: RecName: Full=Hatching enzyme 18
           kDa form; Flags: Precursor
 gi|9996|emb|CAA37667.1| pre-pro-hatching enzyme [Paracentrotus lividus]
          Length = 587

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 4/79 (5%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRA-DILIYFEKENHWDGYPFDGPGKILAHA 72
           ++  ++DE+RRA  VW   S L+FREV D  + DI I F   +H DG  FDG G +LAHA
Sbjct: 192 NQNDVKDEIRRAFRVWDDVSGLSFREVPDTTSVDIRIKFGSYDHGDGISFDGRGGVLAHA 251

Query: 73  FFPGSGRGGDAHFDIDEDW 91
           F P   R GDAHFD  E W
Sbjct: 252 FLP---RNGDAHFDDSETW 267


>gi|354494998|ref|XP_003509619.1| PREDICTED: matrix metalloproteinase-15 [Cricetulus griseus]
 gi|344245640|gb|EGW01744.1| Matrix metalloproteinase-15 [Cricetulus griseus]
          Length = 555

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 47/80 (58%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREVNDD--------RADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L FREV+ D         ADI++ F    H D  PFDG G  LAH
Sbjct: 56  EAVRRAFRVWEQVTPLVFREVSYDDIRLRRREEADIMVLFASGFHGDSSPFDGVGGFLAH 115

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGD HFD DE W
Sbjct: 116 AYFPGPGLGGDTHFDADEPW 135


>gi|62897055|dbj|BAD96468.1| matrix metalloproteinase 13 preproprotein variant [Homo sapiens]
          Length = 471

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 53/94 (56%), Gaps = 8/94 (8%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
            ++A  VWS  + L F  ++D  ADI+I F  + H D YPFDGP   LAHAF PG   GG
Sbjct: 138 FKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGPLAHAFPPGPNYGG 197

Query: 82  DAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           DAHFD DE W         ++ +G +L L  A E
Sbjct: 198 DAHFDDDETW--------TSSSKGYNLFLVAAHE 223


>gi|426244421|ref|XP_004016021.1| PREDICTED: matrix metalloproteinase-27 [Ovis aries]
          Length = 511

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 5/106 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENH-WDGYPFDGPGKILAHAF 73
           R  + + +++ L+VWSK + LTF +++   ADI+I F    H W    FDGP  +L HAF
Sbjct: 123 RPDVDEAIQKGLEVWSKVTPLTFTKISKGIADIMIAFRTRVHGWCPRYFDGPLGVLGHAF 182

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADE 115
            PG G GGD HFD DE+W   GV  S    A  + G SL L+++ +
Sbjct: 183 PPGLGLGGDTHFDEDENWTKDGVGFSLFLVAAHEFGHSLGLSHSSD 228


>gi|327283195|ref|XP_003226327.1| PREDICTED: matrix metalloproteinase-17-like [Anolis carolinensis]
          Length = 562

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 12  HYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           H     +R  +  AL VWS  + L F EV  + ADI I F K +H DGYPFDGPG ++AH
Sbjct: 115 HLGHDTVRALMYYALKVWSDITPLNFHEVAGNNADIQIDFSKTDHNDGYPFDGPGGMVAH 174

Query: 72  AFFPGSGR-GGDAHFDIDEDW 91
           AF PG     GD HFD DE W
Sbjct: 175 AFSPGEHHAAGDTHFDDDESW 195


>gi|408833330|gb|AFU93061.1| matrix metalloproteinase 9, partial [Marmota monax]
          Length = 265

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/109 (43%), Positives = 56/109 (51%), Gaps = 5/109 (4%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VWS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 98  RDVIDDAFARAFAVWSAVTPLTFTRVYGREADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 157

Query: 75  PGSGRGGDAHFDIDEDWM----VLGVSRSANADEGKSLELANADEGRRH 119
           PG G  GDAHFD +E W     V+  +   NA+ G         EGR +
Sbjct: 158 PGPGIQGDAHFDDEELWSLGKGVVVPTHFGNAN-GAPCHFPFTFEGRSY 205


>gi|351697753|gb|EHB00672.1| Matrix metalloproteinase-15 [Heterocephalus glaber]
          Length = 714

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 46/80 (57%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREVNDD--------RADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV  D         ADI++ F    H D  PFDG G  LAH
Sbjct: 240 EAVRRAFRVWEQATPLVFQEVPYDDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 299

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGD HFD DE W
Sbjct: 300 AYFPGPGLGGDTHFDADEPW 319


>gi|224162231|ref|XP_002338425.1| predicted protein [Populus trichocarpa]
 gi|222872207|gb|EEF09338.1| predicted protein [Populus trichocarpa]
          Length = 304

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 4/83 (4%)

Query: 10  VRHYDRGRLRDELRRALDVWSKHSKLTFREVNDD-RADILIYFEKENHWDGYPFDGPGKI 68
           V+  D   LR     A   WS  S LTF+E +D   A+I+I F + +H DGYPFDGPGKI
Sbjct: 163 VQVVDMDTLRSVCSDAFKKWSDVSPLTFQEASDGASANIVIAFYRGDHGDGYPFDGPGKI 222

Query: 69  LAHAFFPGSGRGGDAHFDIDEDW 91
           LAHAF P +GR    H+D DE W
Sbjct: 223 LAHAFSPENGR---FHYDADEKW 242


>gi|260808835|ref|XP_002599212.1| hypothetical protein BRAFLDRAFT_199955 [Branchiostoma floridae]
 gi|229284489|gb|EEN55224.1| hypothetical protein BRAFLDRAFT_199955 [Branchiostoma floridae]
          Length = 158

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/74 (54%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 20 DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
          D +RR L VWS  + L F E     +DI + FEK  H D  P DGPG  LAHAFFPG G 
Sbjct: 25 DAVRRGLQVWSNVTPLVF-EKTSAYSDIEMSFEKYGHGDEDPLDGPGGTLAHAFFPGPGI 83

Query: 80 GGDAHFDIDEDWMV 93
          GGD HFD  E W V
Sbjct: 84 GGDVHFDDSETWTV 97


>gi|348543594|ref|XP_003459268.1| PREDICTED: matrix metalloproteinase-14-like [Oreochromis niloticus]
          Length = 556

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 20  DELRRALDVWSKHSKLTFREVN--------DDRADILIYFEKENHWDGYPFDGPGKILAH 71
           D +R+A  VW     LTFRE+         D  ADI++ F +  H D  PFDG G  LAH
Sbjct: 134 DAIRKAFKVWESAIPLTFREIPFSQIRGSPDKYADIMLSFAEGFHGDSTPFDGEGGFLAH 193

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG   GGD HFD+ E W    V +  N
Sbjct: 194 AYFPGPAIGGDTHFDLAEPWTTGTVDQGGN 223


>gi|344237549|gb|EGV93652.1| Matrix metalloproteinase-25 [Cricetulus griseus]
          Length = 413

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 3/74 (4%)

Query: 22 LRRALDVWSKHSKLTFREVN--DDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS-G 78
          +  AL VW+  S LTF+EV+  +  ADILI+F +  H D YPFDGPG  LAHAFFPG   
Sbjct: 1  MSYALAVWAVESGLTFKEVDSQNQEADILIHFSRGYHQDTYPFDGPGGTLAHAFFPGEHP 60

Query: 79 RGGDAHFDIDEDWM 92
            GD HFD +E W 
Sbjct: 61 ISGDTHFDDEETWT 74


>gi|37726919|gb|AAO63003.1| collagenase 4 [Necturus maculosus]
          Length = 237

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 47/77 (61%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + + +++A  VWS  + L F  + D  +DI I F   +H D  PFDGPG+ LAHAF 
Sbjct: 58  RANVENLIQKAFKVWSDVTHLKFTRIFDGISDIEISFVAGDHGDNSPFDGPGEFLAHAFD 117

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G GGD HFD DE W
Sbjct: 118 PGYGVGGDVHFDEDETW 134


>gi|126723483|ref|NP_001075672.1| matrix metalloproteinase-9 precursor [Oryctolagus cuniculus]
 gi|729178|sp|P41246.1|MMP9_RABIT RecName: Full=Matrix metalloproteinase-9; Short=MMP-9; AltName:
           Full=92 kDa gelatinase; AltName: Full=92 kDa type IV
           collagenase; AltName: Full=Gelatinase B; Short=GELB;
           Flags: Precursor
 gi|499373|dbj|BAA05520.1| matrix metalloproteinase 9 [Oryctolagus cuniculus]
          Length = 707

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/77 (50%), Positives = 45/77 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GDAHFD +E W
Sbjct: 194 PGPGIQGDAHFDDEELW 210


>gi|118488262|gb|ABK95950.1| unknown [Populus trichocarpa]
          Length = 304

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 4/83 (4%)

Query: 10  VRHYDRGRLRDELRRALDVWSKHSKLTFREVNDD-RADILIYFEKENHWDGYPFDGPGKI 68
           V+  D   LR     A   WS  S LTF+E +D   A+I+I F + +H DGYPFDGPGKI
Sbjct: 163 VQVVDMDTLRSVCSDAFKKWSDVSPLTFQEASDGASANIVIAFYRGDHGDGYPFDGPGKI 222

Query: 69  LAHAFFPGSGRGGDAHFDIDEDW 91
           LAHAF P +GR    H+D DE W
Sbjct: 223 LAHAFSPENGR---FHYDADEKW 242


>gi|156717858|ref|NP_001096469.1| matrix metallopeptidase 17 (membrane-inserted) precursor [Xenopus
           (Silurana) tropicalis]
 gi|134024244|gb|AAI36207.1| LOC100125088 protein [Xenopus (Silurana) tropicalis]
          Length = 588

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 7/90 (7%)

Query: 9   RVRHYDR------GRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR++ +        +R  +  AL VWS  + L F EV  + ADI I F + +H DGYPF
Sbjct: 130 RVRNFPKESSLGHDTVRALMYYALKVWSDITPLNFHEVAGNNADIQIDFSRADHNDGYPF 189

Query: 63  DGPGKILAHAFFPGSG-RGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD +E W
Sbjct: 190 DGPGGTVAHAFFPGEHLTSGDTHFDDEESW 219


>gi|328780642|ref|XP_393358.4| PREDICTED: matrix metalloproteinase-14-like [Apis mellifera]
          Length = 575

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 7/112 (6%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           K  R+  + ++  EL +A  VWS+++ L F +    +  I I FEK  H DG PFDGPG 
Sbjct: 135 KYPRNLPQHKVDAELNKAFKVWSEYTDLVFVQKKSGQVHIEIRFEKGEHGDGDPFDGPGG 194

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDWMV-----LGVSRSANADEGKSLELANAD 114
            LAHA+FP    GGDAHFD  E W +       + + A  + G SL L+++D
Sbjct: 195 TLAHAYFPVY--GGDAHFDDAEQWTIDSFRGTNLFQVAAHEFGHSLGLSHSD 244


>gi|172356221|ref|NP_001116500.1| matrix metalloproteinase 1 isoform 2 [Bombyx mori]
 gi|169730454|gb|ACA64805.1| matrix metalloproteinase variant 2 [Bombyx mori]
          Length = 538

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 65/117 (55%), Gaps = 10/117 (8%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           +  +P R+   +R  +  EL +A  VWS ++ LTF +    +  I I FEK  H DG PF
Sbjct: 144 ISKYPSRL---NRAEVDAELAKAFSVWSDYTDLTFTQKRSGQVHIEIRFEKGEHGDGDPF 200

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDWMV-----LGVSRSANADEGKSLELANAD 114
           DGPG  LAHA+FP    GGDAHFD  E W +       + + A  + G SL L+++D
Sbjct: 201 DGPGGTLAHAYFP--VYGGDAHFDDAEMWSINSRRGTNLFQVAAHEFGHSLGLSHSD 255


>gi|148690305|gb|EDL22252.1| matrix metallopeptidase 25 [Mus musculus]
          Length = 562

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 3/77 (3%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDD--RADILIYFEKENHWDGYPFDGPGKILAHAFFP 75
           +R  L  AL VW+  S LTF+EVN      DI+I+F +  H D YPFDG G  LAHAFFP
Sbjct: 140 VRTLLSYALAVWATESGLTFQEVNSQYQEPDIIIHFARAYHQDSYPFDGSGGTLAHAFFP 199

Query: 76  GSGR-GGDAHFDIDEDW 91
           G     GD HFD +E W
Sbjct: 200 GEHPISGDTHFDDEETW 216


>gi|172356113|ref|NP_001116499.1| matrix metalloproteinase 1 isoform 1 [Bombyx mori]
 gi|169730452|gb|ACA64804.1| matrix metalloproteinase variant 1 [Bombyx mori]
          Length = 561

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 65/117 (55%), Gaps = 10/117 (8%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           +  +P R+   +R  +  EL +A  VWS ++ LTF +    +  I I FEK  H DG PF
Sbjct: 144 ISKYPSRL---NRAEVDAELAKAFSVWSDYTDLTFTQKRSGQVHIEIRFEKGEHGDGDPF 200

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDWMV-----LGVSRSANADEGKSLELANAD 114
           DGPG  LAHA+FP    GGDAHFD  E W +       + + A  + G SL L+++D
Sbjct: 201 DGPGGTLAHAYFP--VYGGDAHFDDAEMWSINSRRGTNLFQVAAHEFGHSLGLSHSD 255


>gi|431914175|gb|ELK15434.1| Matrix metalloproteinase-15 [Pteropus alecto]
          Length = 315

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 120 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 179

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGD HFD DE W
Sbjct: 180 AYFPGPGLGGDTHFDADEPW 199


>gi|403306032|ref|XP_003943550.1| PREDICTED: matrix metalloproteinase-15 [Saimiri boliviensis
           boliviensis]
          Length = 666

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 47/90 (52%), Gaps = 8/90 (8%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 162 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGSGGFLAH 221

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W       S N
Sbjct: 222 AYFPGPGLGGDTHFDADEPWTFSNTDLSGN 251


>gi|149756826|ref|XP_001493989.1| PREDICTED: matrix metalloproteinase-17 [Equus caballus]
          Length = 579

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/101 (49%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV    ADI I F K +H D YPF
Sbjct: 116 RVRTFPRDSPLGRDTVRALMHYALKVWSDITPLNFHEVAGSAADIQIDFSKADHNDRYPF 175

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDWMVLGVSRSANA 102
           DGPG  +AHAFFPG     GD HFD DE W      RSA+A
Sbjct: 176 DGPGGTVAHAFFPGDHHTAGDTHFDDDEAWTF----RSADA 212


>gi|149699604|ref|XP_001494346.1| PREDICTED: matrix metalloproteinase-15 [Equus caballus]
          Length = 652

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 136 EAVRRAFQVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 195

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           A+FPG G GGD HFD DE W       S+    G SL L    E
Sbjct: 196 AYFPGPGLGGDTHFDADEPWTF-----SSTDLHGNSLFLVAVHE 234


>gi|449269762|gb|EMC80513.1| Collagenase 3 [Columba livia]
          Length = 471

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 45/77 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +    ++A  VWS  + L F  +    ADI+I F  + H D YPFDGP  +LAHAF 
Sbjct: 131 RAEVDRAFKKAFKVWSDVTPLNFTRIRSGIADIMISFGTKEHGDFYPFDGPSGLLAHAFP 190

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG   GGDAHFD DE W
Sbjct: 191 PGPDYGGDAHFDDDEAW 207


>gi|441597126|ref|XP_003263157.2| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-15
           [Nomascus leucogenys]
          Length = 669

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 45/80 (56%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           D +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 162 DAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 221

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGD HFD DE W
Sbjct: 222 AYFPGPGLGGDTHFDADEPW 241


>gi|148679223|gb|EDL11170.1| matrix metallopeptidase 15, isoform CRA_b [Mus musculus]
          Length = 517

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 8/80 (10%)

Query: 20 DELRRALDVWSKHSKLTFREVNDD--------RADILIYFEKENHWDGYPFDGPGKILAH 71
          + +RRA  VW + + L F+EV+ D         ADI++ F    H D  PFDG G  LAH
Sbjct: 18 EAVRRAFQVWEQVTPLVFQEVSYDDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAH 77

Query: 72 AFFPGSGRGGDAHFDIDEDW 91
          A+FPG G GGD HFD DE W
Sbjct: 78 AYFPGPGLGGDTHFDADEPW 97


>gi|301605887|ref|XP_002932554.1| PREDICTED: matrix metalloproteinase-9-like [Xenopus (Silurana)
           tropicalis]
          Length = 684

 Score = 76.3 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/74 (50%), Positives = 44/74 (59%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + LTF  + +   DI I F  E+H D YPFDG   +LAHA+ PG G 
Sbjct: 141 DAFARAFKVWSDVTPLTFTRIYNGEPDINILFGTEDHGDPYPFDGKDGLLAHAYPPGPGM 200

Query: 80  GGDAHFDIDEDWMV 93
            GDAHFD DE W +
Sbjct: 201 QGDAHFDDDEFWTL 214


>gi|260836059|ref|XP_002613024.1| hypothetical protein BRAFLDRAFT_266228 [Branchiostoma floridae]
 gi|229298407|gb|EEN69033.1| hypothetical protein BRAFLDRAFT_266228 [Branchiostoma floridae]
          Length = 494

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 1/80 (1%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           DR  + D + RA  +W + + L F   +   +DI I F + +H DG PFDG G  LAHA+
Sbjct: 118 DRAEVEDAIYRAFRIWEQVTPLRFSRTSGT-SDIEISFVQFSHGDGNPFDGRGGTLAHAY 176

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
           FPG+G GGDAHFD  E W V
Sbjct: 177 FPGTGIGGDAHFDESEQWTV 196


>gi|148679222|gb|EDL11169.1| matrix metallopeptidase 15, isoform CRA_a [Mus musculus]
          Length = 501

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 8/80 (10%)

Query: 20 DELRRALDVWSKHSKLTFREVNDD--------RADILIYFEKENHWDGYPFDGPGKILAH 71
          + +RRA  VW + + L F+EV+ D         ADI++ F    H D  PFDG G  LAH
Sbjct: 2  EAVRRAFQVWEQVTPLVFQEVSYDDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAH 61

Query: 72 AFFPGSGRGGDAHFDIDEDW 91
          A+FPG G GGD HFD DE W
Sbjct: 62 AYFPGPGLGGDTHFDADEPW 81


>gi|301610867|ref|XP_002934967.1| PREDICTED: matrix metalloproteinase-20-like [Xenopus (Silurana)
           tropicalis]
          Length = 478

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 48/89 (53%), Gaps = 4/89 (4%)

Query: 9   RVRHYDRGRLRDELRRALDV----WSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+  Y       ++ RA+D+    WS  + L F +     ADI+I FE  +H D YPFDG
Sbjct: 124 RITKYTSSLSTQDVDRAVDLGLKAWSDAAPLNFIKTTQGEADIMISFESGDHGDSYPFDG 183

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           P   LAHAF PG G GGD HFD  E W  
Sbjct: 184 PRGTLAHAFAPGEGLGGDTHFDNAERWTT 212


>gi|426374723|ref|XP_004054214.1| PREDICTED: matrix metalloproteinase-17 [Gorilla gorilla gorilla]
          Length = 603

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/90 (48%), Positives = 51/90 (56%), Gaps = 7/90 (7%)

Query: 9   RVRHYDRGR------LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R        +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 141 RVRTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQIDFSKADHNDGYPF 200

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD +E W
Sbjct: 201 DGPGGTVAHAFFPGDHHTAGDTHFDDEEAW 230


>gi|326669661|ref|XP_002662954.2| PREDICTED: matrix metalloproteinase-15-like [Danio rerio]
          Length = 655

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 11/101 (10%)

Query: 1   MTLKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREV--------NDDRADILIYFE 52
            +++++  ++  Y+     + +RRA  VW K + LTF E+             DI+I+F 
Sbjct: 130 FSIQNYTPKIGEYNS---YEAIRRAFRVWEKVTPLTFDEIPFHEVKYGRRKEPDIMIFFA 186

Query: 53  KENHWDGYPFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
              H D  PFDG G  LAHA+FPG G GGD HFD DE W +
Sbjct: 187 SGFHGDSSPFDGEGGFLAHAYFPGPGMGGDTHFDSDEPWTI 227


>gi|357015189|ref|ZP_09080188.1| peptidase, partial [Paenibacillus elgii B69]
          Length = 298

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 15/105 (14%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFD----GPGKILAHAF 73
           +RD +R+A ++WS+ + LTF EV  + ADILI F   +H DG PFD    G G +LAHA+
Sbjct: 141 IRDAIRQAFNLWSEVTPLTFTEVTSN-ADILIRFATGDHGDGDPFDGAGNGAGNVLAHAY 199

Query: 74  FPGSGRG---GDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           +P   RG   GDAHFD  E W V       NA  G  L    A E
Sbjct: 200 YPPPNRGDLAGDAHFDDAETWTV-------NASSGVDLVTVAAHE 237


>gi|260820268|ref|XP_002605457.1| hypothetical protein BRAFLDRAFT_120668 [Branchiostoma floridae]
 gi|229290790|gb|EEN61467.1| hypothetical protein BRAFLDRAFT_120668 [Branchiostoma floridae]
          Length = 548

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 46/75 (61%), Gaps = 3/75 (4%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R+ +RR   VWS  + L FRE     ADI I F + +H DGYPFDG G  LAHAF+P 
Sbjct: 150 QVREAIRRGFQVWSDVTPLRFRETTSSNADINIQFSRFDHRDGYPFDGRGGTLAHAFYPE 209

Query: 77  SGRGGDAHFDIDEDW 91
            GR    HFD DE W
Sbjct: 210 DGR---THFDDDEQW 221


>gi|157818219|ref|NP_001099638.1| matrix metallopeptidase 15 precursor [Rattus norvegicus]
 gi|149032397|gb|EDL87288.1| rCG39153 [Rattus norvegicus]
          Length = 657

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 46/80 (57%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREVNDD--------RADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV  D         ADI++ F    H D  PFDG G  LAH
Sbjct: 158 EAVRRAFQVWEQVTPLVFQEVPYDDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAH 217

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGD HFD DE W
Sbjct: 218 AYFPGPGLGGDTHFDADEPW 237


>gi|432095057|gb|ELK26446.1| Matrix metalloproteinase-17 [Myotis davidii]
          Length = 674

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 50/90 (55%), Gaps = 7/90 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VW   + L F EV    ADI I F   +H D YPF
Sbjct: 112 RVRTFPRDSPLGRDMVRALMHYALKVWGDITPLNFHEVAGSAADIQIDFSTADHNDRYPF 171

Query: 63  DGPGKILAHAFFPGSGR-GGDAHFDIDEDW 91
           DGPG  +AHAF PG     GDAHFD DE W
Sbjct: 172 DGPGGTVAHAFLPGDHHTAGDAHFDDDEAW 201


>gi|60207666|gb|AAX14807.1| matrix metalloproteinase 3/10b [Notophthalmus viridescens]
          Length = 469

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 4/107 (3%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +   +++A  VWS  + LTF  +    ADI I F    H D  PFDGP   LAHAF 
Sbjct: 125 RADVDTAIQKAFKVWSDVTPLTFTRIYYGTADIQISFAAREHGDFSPFDGPHGTLAHAFA 184

Query: 75  PGSGRGGDAHFDIDEDWMVLGVSRS----ANADEGKSLELANADEGR 117
           P +G GGDAHFD DE W       +    A  + G SL L+++++ R
Sbjct: 185 PSTGIGGDAHFDEDERWTKGSAGTNLFLVAAHEFGHSLGLSHSNDRR 231


>gi|373428615|gb|AEY69042.1| matrix metalloproteinase [Thamnodynastes strigatus]
          Length = 287

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 49/88 (55%), Gaps = 5/88 (5%)

Query: 9   RVRHY----DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           RV +Y    D   + D   RA  +WS  + LTF        DILI F  +NH DGYPFDG
Sbjct: 113 RVVNYSPDLDVASIDDAFTRAFGMWSNVAPLTFTRQEQGDVDILIGFGSQNHGDGYPFDG 172

Query: 65  PGKILAHAFFPGSGR-GGDAHFDIDEDW 91
              +LAHAF PG+    GDAHFD DE W
Sbjct: 173 QYGVLAHAFAPGTNSISGDAHFDEDELW 200


>gi|355702787|gb|AES02048.1| matrix metallopeptidase 15 [Mustela putorius furo]
          Length = 377

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 104 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 163

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           A+FPG G GGD HFD DE W       S+    G SL L    E
Sbjct: 164 AYFPGPGLGGDTHFDADEPWTF-----SSTDLHGNSLFLVAVHE 202


>gi|291415807|ref|XP_002724141.1| PREDICTED: matrix metalloproteinase 17, partial [Oryctolagus
           cuniculus]
          Length = 541

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/91 (49%), Positives = 52/91 (57%), Gaps = 7/91 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +   L VWS  + L F E+    ADI I F K +H DGYPF
Sbjct: 88  RVRTFPRDSPLGRDTVRALMYYTLKVWSDITPLNFHEMASSAADIQIDFSKADHNDGYPF 147

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDWM 92
           DGPG  +AHAFFPG     GD HFD DE W 
Sbjct: 148 DGPGGTVAHAFFPGDHHTAGDTHFDDDEAWT 178


>gi|55742210|ref|NP_001006843.1| matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa
           type IV collagenase) precursor [Xenopus (Silurana)
           tropicalis]
 gi|49899913|gb|AAH76927.1| matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa
           type IV collagenase) [Xenopus (Silurana) tropicalis]
          Length = 670

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/74 (50%), Positives = 43/74 (58%)

Query: 20  DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGR 79
           D   RA  VWS  + LTF  +     DI I F  E+H D YPFDG   +LAHA+ PG G 
Sbjct: 138 DAFARAFKVWSDVTPLTFTRIYSGEPDINILFGPEDHGDPYPFDGKDGLLAHAYPPGPGV 197

Query: 80  GGDAHFDIDEDWMV 93
            GDAHFD DE W +
Sbjct: 198 QGDAHFDEDEFWTL 211


>gi|423554697|ref|ZP_17531022.1| hypothetical protein IGW_05326 [Bacillus cereus ISP3191]
 gi|401179686|gb|EJQ86851.1| hypothetical protein IGW_05326 [Bacillus cereus ISP3191]
          Length = 262

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/78 (47%), Positives = 47/78 (60%), Gaps = 3/78 (3%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
            +R  +  A  +WS+ + LTF EV  + ADILI F   +H DG PFDG G +LAHA++P 
Sbjct: 121 EIRSGIATAFGLWSQVTPLTFTEVTSNNADILISFVTGDHGDGDPFDGAGNVLAHAYYPP 180

Query: 77  SGRG---GDAHFDIDEDW 91
              G   GDAHFD  E W
Sbjct: 181 PNGGEIAGDAHFDDSETW 198


>gi|296213291|ref|XP_002753210.1| PREDICTED: matrix metalloproteinase-17 [Callithrix jacchus]
          Length = 614

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/90 (51%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV    ADI I F K +H DGYPF
Sbjct: 148 RVRTFPRDSPLGRDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQIDFSKADHNDGYPF 207

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDW 91
           DGPG  +AHAFFP      GD HFD DE W
Sbjct: 208 DGPGGTVAHAFFPSDHHTAGDTHFDDDEAW 237


>gi|345793895|ref|XP_544383.3| PREDICTED: matrix metalloproteinase-15 [Canis lupus familiaris]
          Length = 900

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 384 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 443

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGD HFD DE W
Sbjct: 444 AYFPGPGLGGDTHFDADEPW 463


>gi|170051326|ref|XP_001861713.1| matrix metalloproteinase [Culex quinquefasciatus]
 gi|167872650|gb|EDS36033.1| matrix metalloproteinase [Culex quinquefasciatus]
          Length = 536

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/118 (41%), Positives = 64/118 (54%), Gaps = 12/118 (10%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           +  +P R+   DR  +  E+ +A  VWS+++ LTF         I I FE   H DG PF
Sbjct: 114 ISKYPARL---DRLEVEKEIAKAFSVWSEYTDLTFTPKKSAPVHIDIRFEVNEHGDGDPF 170

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSANADE------GKSLELANAD 114
           DGPG  LAHA+FP    GGDAHFD  E W + G SR  N  +      G SL L+++D
Sbjct: 171 DGPGGTLAHAYFP--VYGGDAHFDDAEFWTI-GKSRGTNLFQVAAHEFGHSLGLSHSD 225


>gi|334314670|ref|XP_003340074.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-14-like
           [Monodelphis domestica]
          Length = 580

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 8/82 (9%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +R+A  VW   + L FREV        ++ +ADI+I+F +  H D  PFDG G  LAH
Sbjct: 141 EAIRKAFKVWEGATPLRFREVPYSYIREGHEKQADIMIFFAEGFHGDSTPFDGEGGFLAH 200

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG   GGD HFD  E W V
Sbjct: 201 AYFPGPNIGGDTHFDSAEPWTV 222


>gi|308475134|ref|XP_003099786.1| hypothetical protein CRE_24123 [Caenorhabditis remanei]
 gi|308266258|gb|EFP10211.1| hypothetical protein CRE_24123 [Caenorhabditis remanei]
          Length = 368

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 57/105 (54%), Gaps = 6/105 (5%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDD---RADILIYFEKENHWDGYPFDGPGKILAH 71
           R  +  E R  L  W +H++L F  VNDD   +A+I I F   NH DG PFDG G ILAH
Sbjct: 2   RKYILIEFRVILHTWEEHTRLWFVAVNDDDEQKANIDIVFAAGNHDDGEPFDGKGNILAH 61

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADEG 116
           AFFP    GGD HFD DE+W     SR  N    K   + +  EG
Sbjct: 62  AFFP--RYGGDVHFDEDENWSANKSSR-LNKSNTKIRNIVSKVEG 103


>gi|260820866|ref|XP_002605755.1| hypothetical protein BRAFLDRAFT_121873 [Branchiostoma floridae]
 gi|229291090|gb|EEN61765.1| hypothetical protein BRAFLDRAFT_121873 [Branchiostoma floridae]
          Length = 488

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 1/81 (1%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R ++ D + RA DVW++ + LTFR V+   ADI I F   +H DG  FD  G +LAHA+ 
Sbjct: 107 RDQVVDAIARAFDVWAQVTPLTFRRVSGP-ADIEIRFAAGSHGDGNSFDSRGGVLAHAYQ 165

Query: 75  PGSGRGGDAHFDIDEDWMVLG 95
           PG G GGDAHFD  E W + G
Sbjct: 166 PGGGIGGDAHFDESEIWQIGG 186


>gi|449269763|gb|EMC80514.1| Interstitial collagenase, partial [Columba livia]
          Length = 431

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 4/97 (4%)

Query: 9   RVRHYDRGRLR----DELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y    L+    + + RA  +WS  + L F  +   +ADI+I F    H D Y FDG
Sbjct: 83  RILNYTPDMLQADVDEAIARAFQLWSSVTPLRFTRLYSGQADIMISFAAGFHGDFYSFDG 142

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           PG  LAHA+ PG+G GGDAHFD DE+W         N
Sbjct: 143 PGGTLAHAYPPGNGIGGDAHFDEDENWTKFTTYSGYN 179


>gi|357619633|gb|EHJ72124.1| matrix metalloproteinase 1 isoform 1 [Danaus plexippus]
          Length = 485

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 65/117 (55%), Gaps = 10/117 (8%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           +  +P R+   +R  +  EL +A  VWS ++ LTF +    +  I I FEK  H DG PF
Sbjct: 70  ISKYPSRL---NRDEVDTELAKAFSVWSDYTDLTFTQKRSGQVHIEIRFEKGEHGDGDPF 126

Query: 63  DGPGKILAHAFFPGSGRGGDAHFDIDEDWMV-----LGVSRSANADEGKSLELANAD 114
           DGPG  LAHA+FP    GGDAHFD  E W +       + + A  + G SL L+++D
Sbjct: 127 DGPGGTLAHAYFP--VYGGDAHFDDAEMWSINSLRGTNLFQVAAHEFGHSLGLSHSD 181


>gi|403262925|ref|XP_003923815.1| PREDICTED: macrophage metalloelastase [Saimiri boliviensis
           boliviensis]
          Length = 468

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/72 (47%), Positives = 46/72 (63%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++A  VWS  S L F ++N   ADI+++F +  H D   FDG G ++AHAF PG G GG
Sbjct: 134 IQKAFQVWSNVSPLKFSKINTGVADIVMFFARGAHGDYNAFDGRGGVIAHAFGPGDGIGG 193

Query: 82  DAHFDIDEDWMV 93
           D HFD DE W +
Sbjct: 194 DTHFDEDEFWTI 205


>gi|345799781|ref|XP_854594.2| PREDICTED: macrophage metalloelastase [Canis lupus familiaris]
          Length = 470

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/70 (50%), Positives = 43/70 (61%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A +VWS  + L FR+VN   ADI+I F    H D  PFDG G ++AHAF PG   GG
Sbjct: 135 IHKAFEVWSNVTPLKFRKVNSGEADIMILFASRAHGDFSPFDGRGGVIAHAFGPGPQIGG 194

Query: 82  DAHFDIDEDW 91
           D HFD  E W
Sbjct: 195 DMHFDEAEIW 204


>gi|310942613|pdb|2XS4|A Chain A, Structure Of Karilysin Catalytic Mmp Domain In Complex
           With Magnesium
          Length = 167

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 5/99 (5%)

Query: 2   TLKHHP-KRVRHYDRGRLRDELRRALDVWSKHSKLTFREV-NDDRADILIYFEKENHWDG 59
           TLK++      H       + +R A  +WS  S L+F +V N ++ADI I +EK NH DG
Sbjct: 12  TLKYYIYNSSSHLTTTERENAIRSAFALWSDKSTLSFIQVYNPNQADIKIKWEKGNHGDG 71

Query: 60  YPFDGPGKILAHAFFP---GSGRGGDAHFDIDEDWMVLG 95
           YPFDG   ILAHAF+P   G    G  HFD DE+W + G
Sbjct: 72  YPFDGNTGILAHAFYPPPAGGNYAGHLHFDDDENWSING 110


>gi|301627877|ref|XP_002943093.1| PREDICTED: matrix metalloproteinase-17, partial [Xenopus (Silurana)
           tropicalis]
          Length = 518

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 52/91 (57%), Gaps = 9/91 (9%)

Query: 19  RDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSG 78
           R  +  AL VWSK ++L FRE  + + DI + F   +H DGYPFDG G  L HAFFPG G
Sbjct: 105 RTLIGTALAVWSKETQLQFRETRE-QPDIRVEFVTGSHGDGYPFDGQGGTLGHAFFPGVG 163

Query: 79  -RGGDAHFDIDEDWMVLGVSRSANADEGKSL 108
            R G+ H D DE W       S N +EG  L
Sbjct: 164 ERAGETHMDADESW-------SYNTEEGTDL 187


>gi|310942609|pdb|2XS3|A Chain A, Structure Of Karilysin Catalytic Mmp Domain
 gi|310942611|pdb|2XS3|B Chain B, Structure Of Karilysin Catalytic Mmp Domain
          Length = 166

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 5/99 (5%)

Query: 2   TLKHHP-KRVRHYDRGRLRDELRRALDVWSKHSKLTFREV-NDDRADILIYFEKENHWDG 59
           TLK++      H       + +R A  +WS  S L+F +V N ++ADI I +EK NH DG
Sbjct: 12  TLKYYIYNSSSHLTTTERENAIRSAFALWSDKSTLSFIQVYNPNQADIKIKWEKGNHGDG 71

Query: 60  YPFDGPGKILAHAFFP---GSGRGGDAHFDIDEDWMVLG 95
           YPFDG   ILAHAF+P   G    G  HFD DE+W + G
Sbjct: 72  YPFDGNTGILAHAFYPPPAGGNYAGHLHFDDDENWSING 110


>gi|444706928|gb|ELW48243.1| Matrix metalloproteinase-9 [Tupaia chinensis]
          Length = 656

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/79 (49%), Positives = 45/79 (56%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  VWS  + L F  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RDVIDDAFARAFAVWSAVTPLRFTRVYGQEADIVIQFGVAEHGDGYPFDGKDGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           PG G  GDAHFD +E W +
Sbjct: 194 PGPGIQGDAHFDDEELWTL 212


>gi|440902643|gb|ELR53413.1| Matrix metalloproteinase-14, partial [Bos grunniens mutus]
          Length = 598

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 98  EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 157

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           A+FPG G GGD HFD DE W       S+    G SL L    E
Sbjct: 158 AYFPGPGLGGDTHFDADEPWTF-----SSTDLHGNSLFLVAVHE 196


>gi|426243554|ref|XP_004015617.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-15 [Ovis
           aries]
          Length = 614

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 162 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 221

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           A+FPG G GGD HFD DE W       S+    G SL L    E
Sbjct: 222 AYFPGPGLGGDTHFDADEPWTF-----SSTDLHGNSLFLVAVHE 260


>gi|126327112|ref|XP_001362711.1| PREDICTED: stromelysin-1 [Monodelphis domestica]
          Length = 478

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 45/70 (64%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + RAL VWS  + LTF  +++  ADI+I F  ++H D  PFDGPG +LAHA+ PG    G
Sbjct: 133 IERALKVWSDVTPLTFTRLSEGEADIMISFSVKDHGDFLPFDGPGGVLAHAYPPGPKING 192

Query: 82  DAHFDIDEDW 91
           D H D DE W
Sbjct: 193 DVHLDDDEKW 202


>gi|118485900|gb|ABK94796.1| unknown [Populus trichocarpa]
          Length = 309

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 46/75 (61%), Gaps = 4/75 (5%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDD-RADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           LR    +A   W+K SK TF+E      ADI+I F   +H D YPFDGPGK LAHAF+P 
Sbjct: 175 LRSVCSKAFQTWAKVSKFTFQEATAGASADIVIEFYSGDHGDRYPFDGPGKTLAHAFYPQ 234

Query: 77  SGRGGDAHFDIDEDW 91
            GR    H+D DE+W
Sbjct: 235 DGR---LHYDADENW 246


>gi|185132700|ref|NP_001116994.1| matrix metalloproteinase 13 precursor [Salmo salar]
 gi|8247750|dbj|BAA96416.1| matrix metalloproteinase 13 [Salmo salar]
          Length = 462

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 46/70 (65%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +R  L+VWS  + L F+++ +  ADI+I F    H D  PFDGP  +LAHA+ PG+G GG
Sbjct: 130 VRNGLNVWSSVTPLKFKKLYEGNADIMISFGAREHGDFNPFDGPDGLLAHAYPPGNGIGG 189

Query: 82  DAHFDIDEDW 91
           D HFD DE W
Sbjct: 190 DTHFDEDETW 199


>gi|301773298|ref|XP_002922071.1| PREDICTED: macrophage metalloelastase-like [Ailuropoda melanoleuca]
          Length = 493

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/70 (50%), Positives = 44/70 (62%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++A  VWS  + L FR++N   ADI+I F    H D  PFDG G ++AHAF PG G GG
Sbjct: 158 IQKAFQVWSDVTPLKFRKINSGEADIMIRFASGAHGDFTPFDGRGGVIAHAFGPGPGIGG 217

Query: 82  DAHFDIDEDW 91
           D HFD  E W
Sbjct: 218 DTHFDEAEIW 227


>gi|8176611|dbj|BAA96389.1| MMP-9 [Bos taurus]
          Length = 324

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 46/79 (58%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  + D   RA  +WS  + LTF  V    ADI+I F    H DGYPFDG   +LAHAF 
Sbjct: 134 RAVIDDAFARAFALWSAVTPLTFTRVYGPEADIVIQFGVREHGDGYPFDGKNGLLAHAFP 193

Query: 75  PGSGRGGDAHFDIDEDWMV 93
           PG G  GDAHFD ++ W +
Sbjct: 194 PGKGIQGDAHFDDEKLWSL 212


>gi|224155037|ref|XP_002337555.1| predicted protein [Populus trichocarpa]
 gi|222839559|gb|EEE77896.1| predicted protein [Populus trichocarpa]
          Length = 171

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 50/83 (60%), Gaps = 4/83 (4%)

Query: 10  VRHYDRGRLRDELRRALDVWSKHSKLTFREVNDD-RADILIYFEKENHWDGYPFDGPGKI 68
           V+  D   LR     A   WS  S LTF+E +D   A+I+I F   +H DGYPFDGPGKI
Sbjct: 30  VQVVDMDTLRSVCSDAFKKWSDVSPLTFQEASDGASANIVIAFYSGDHGDGYPFDGPGKI 89

Query: 69  LAHAFFPGSGRGGDAHFDIDEDW 91
           LAHAF P +GR    H+D DE W
Sbjct: 90  LAHAFSPENGR---FHYDADEKW 109


>gi|355702774|gb|AES02044.1| matrix metallopeptidase 12 [Mustela putorius furo]
          Length = 481

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/70 (50%), Positives = 44/70 (62%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++A  VWS  + L FR++N   ADI+I F    H D  PFDG G ++AHAF P  G GG
Sbjct: 147 IQKAFQVWSDVTPLKFRKINSGEADIMILFASGAHGDYSPFDGRGGVIAHAFGPALGIGG 206

Query: 82  DAHFDIDEDW 91
           DAHFD  E W
Sbjct: 207 DAHFDEAEIW 216


>gi|444725647|gb|ELW66208.1| Matrix metalloproteinase-15 [Tupaia chinensis]
          Length = 891

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 394 EAVRRAFRVWEQATPLAFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 453

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGD HFD DE W
Sbjct: 454 AYFPGPGLGGDTHFDADEPW 473


>gi|431912102|gb|ELK14240.1| Matrix metalloproteinase-17 [Pteropus alecto]
          Length = 513

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/101 (49%), Positives = 57/101 (56%), Gaps = 11/101 (10%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV    ADI I F K +H D YPF
Sbjct: 57  RVRTFPRDSPLGRDTVRALMHYALKVWSDIAPLDFHEVAGSTADIQIDFSKADHADRYPF 116

Query: 63  DGPGKILAHAFFPGS-GRGGDAHFDIDEDWMVLGVSRSANA 102
           DGPG  +AHAF PG     GDAHFD DE W      RSA+A
Sbjct: 117 DGPGGTVAHAFLPGDRPTAGDAHFDDDEAWTF----RSADA 153


>gi|397516416|ref|XP_003828426.1| PREDICTED: stromelysin-2 [Pan paniscus]
          Length = 476

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     RD     + +AL VW + + LTF  + +  ADI+I F  + H D Y
Sbjct: 112 HLTYRIVNYTPDLPRDAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMISFAVKEHGDFY 171

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
            FDGPG+ LAHA+ PG G  GD HFD DE W
Sbjct: 172 SFDGPGQSLAHAYPPGPGLYGDIHFDDDEKW 202


>gi|432119387|gb|ELK38465.1| Matrix metalloproteinase-16 [Myotis davidii]
          Length = 622

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 20  DELRRALDVWSKHSKLTFREVN--------DDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 92  EAVRRAFRVWEQATPLVFQEVPYQDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 151

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           A+FPG G GGD HFD DE W       S+    G SL L    E
Sbjct: 152 AYFPGPGLGGDTHFDADEPWTF-----SSTDMHGNSLFLVAVHE 190


>gi|281346656|gb|EFB22240.1| hypothetical protein PANDA_000051 [Ailuropoda melanoleuca]
          Length = 617

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 109 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 168

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           A+FPG G GGD HFD DE W       S+    G SL L    E
Sbjct: 169 AYFPGPGLGGDTHFDADEPWTF-----SSTDLHGNSLFLVAVHE 207


>gi|344287823|ref|XP_003415651.1| PREDICTED: stromelysin-2 [Loxodonta africana]
          Length = 476

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+ +Y     RD     + +AL VW + + LTF    +  ADI+I F    H D +
Sbjct: 112 HLTYRIVNYTLDLPRDAVDAAIEKALKVWEEVTPLTFSRNKEGEADIMISFAVREHGDFF 171

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           PFDGPG  +AHA+ PG G  GD HFD DE W
Sbjct: 172 PFDGPGATVAHAYAPGPGINGDVHFDDDERW 202


>gi|149716844|ref|XP_001498924.1| PREDICTED: macrophage metalloelastase-like [Equus caballus]
          Length = 470

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/70 (51%), Positives = 43/70 (61%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++A  VWS  + L FR++N   ADI+I F    H D  PFDG   ILAHAF PG G GG
Sbjct: 135 IQKAFQVWSDVTPLKFRKINTGEADIMIQFAHGAHGDYSPFDGRNGILAHAFGPGPGIGG 194

Query: 82  DAHFDIDEDW 91
           D HFD  E W
Sbjct: 195 DTHFDEAEIW 204


>gi|410928765|ref|XP_003977770.1| PREDICTED: matrix metalloproteinase-14-like [Takifugu rubripes]
          Length = 630

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 11/101 (10%)

Query: 1   MTLKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVN--------DDRADILIYFE 52
            +++++  +V  Y+     + +R+A  VW   + L FRE+         ++ ADI+++F 
Sbjct: 123 FSIQNYTPKVGEYE---TYEAIRKAFKVWESITPLRFREIPYSYIRDRVEEFADIMLFFG 179

Query: 53  KENHWDGYPFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
           +  H D  PFDG G  LAHA+FPG+G GGD HFD  E W V
Sbjct: 180 EGFHGDSTPFDGEGGFLAHAYFPGNGIGGDTHFDAAEPWTV 220


>gi|157278503|ref|NP_001098353.1| membrane-type matrix metalloproteinase precursor [Oryzias latipes]
 gi|46359589|dbj|BAD15297.1| membrane-type matrix metalloproteinase [Oryzias latipes]
          Length = 658

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 46/82 (56%), Gaps = 8/82 (9%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + LTF E+             DI+I+F    H D  PFDG G  LAH
Sbjct: 146 EAIRRAFKVWERVTPLTFDEIPYQEIKYGRRKEPDIMIFFASGFHGDSSPFDGEGGFLAH 205

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           A+FPG G GGD HFD DE W +
Sbjct: 206 AYFPGPGMGGDTHFDSDEPWTI 227


>gi|444724332|gb|ELW64939.1| Stromelysin-1 [Tupaia chinensis]
          Length = 384

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 42/68 (61%)

Query: 24  RALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDA 83
           +AL VW   + LTF    D  ADI+I F  + H D +PFDGPG  LAHA+ PG G  GD 
Sbjct: 136 KALKVWKDVTPLTFSRTYDREADIMISFVVKEHGDFFPFDGPGSSLAHAYPPGPGVEGDV 195

Query: 84  HFDIDEDW 91
           HFD DE W
Sbjct: 196 HFDDDEKW 203


>gi|348572648|ref|XP_003472104.1| PREDICTED: matrix metalloproteinase-15-like [Cavia porcellus]
          Length = 663

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 8/91 (8%)

Query: 20  DELRRALDVWSKHSKLTFREVNDD--------RADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV  D         ADI++ F    H D  PFDG G  LAH
Sbjct: 158 EAVRRAFRVWEQATPLVFQEVPYDDIRLRRQKEADIMVLFASGFHGDSSPFDGMGGFLAH 217

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANA 102
           A+FPG G GGD HFD DE W         N+
Sbjct: 218 AYFPGPGLGGDTHFDADEPWTFSSTDLHGNS 248


>gi|301752966|ref|XP_002912340.1| PREDICTED: matrix metalloproteinase-15-like [Ailuropoda
           melanoleuca]
          Length = 648

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 150 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 209

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           A+FPG G GGD HFD DE W       S+    G SL L    E
Sbjct: 210 AYFPGPGLGGDTHFDADEPWTF-----SSTDLHGNSLFLVAVHE 248


>gi|291390212|ref|XP_002711594.1| PREDICTED: matrix metalloproteinase 15 [Oryctolagus cuniculus]
          Length = 668

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 54/104 (51%), Gaps = 13/104 (12%)

Query: 20  DELRRALDVWSKHSKLTFREVNDD--------RADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV  +         ADI++ F    H D  PFDG G  LAH
Sbjct: 155 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQREADIMVLFASGFHGDSSPFDGTGGFLAH 214

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           A+FPG G GGD HFD DE W     + S+    G SL L    E
Sbjct: 215 AYFPGPGLGGDTHFDADEPW-----TSSSTDLHGNSLFLVAVHE 253


>gi|148235497|ref|NP_001087063.1| stromelysin-1 [Xenopus laevis]
 gi|50417744|gb|AAH77966.1| Mmp13-prov protein [Xenopus laevis]
          Length = 458

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/72 (48%), Positives = 45/72 (62%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +A  VWS  + L F+++N   ADILI F  + H D   FDGP  +LAHA+ P  G GG
Sbjct: 109 IAQAFRVWSDVTPLNFQKLNSVDADILISFNTKAHGDFNSFDGPNGVLAHAYAPAEGIGG 168

Query: 82  DAHFDIDEDWMV 93
           DAHFD DE W +
Sbjct: 169 DAHFDEDEQWTL 180


>gi|300794469|ref|NP_001178363.1| matrix metalloproteinase-15 precursor [Bos taurus]
 gi|296478084|tpg|DAA20199.1| TPA: matrix metallopeptidase 15 (membrane-inserted) [Bos taurus]
          Length = 675

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 162 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 221

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           A+FPG G GGD HFD DE W       S+    G SL L    E
Sbjct: 222 AYFPGPGLGGDTHFDADEPWTF-----SSTDLHGNSLFLVAVHE 260


>gi|38343928|emb|CAE54592.1| putative hatching enzyme [Sphaerechinus granularis]
          Length = 419

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 47/107 (43%), Positives = 60/107 (56%), Gaps = 9/107 (8%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDD-RADILIYFEKENHWDGYPFDGPGKILAHA 72
           +R  +++E+RRA  VW + S LTFRE  D    DI I F   +H DG  FDG G +LAHA
Sbjct: 68  NRDAIKNEMRRAFQVWDEVSGLTFREEADSPSVDIRIKFGSFDHGDGISFDGRGGVLAHA 127

Query: 73  FFPGSGRGGDAHFDIDEDWMVLGVS-----RSANADEGKSLELANAD 114
           F P   R GDAHFD  E W +   S     + A  + G SL L ++D
Sbjct: 128 FLP---RNGDAHFDDSETWTIGTYSGTNLFQVAAHEFGHSLGLYHSD 171


>gi|296216047|ref|XP_002754396.1| PREDICTED: stromelysin-2 [Callithrix jacchus]
          Length = 477

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 47/77 (61%)

Query: 15  RGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFF 74
           R  +   + +AL VW + + LTF  + +  ADILI F  + H D Y FDGPG  LAHA+ 
Sbjct: 127 RNAVDSAIEKALKVWEEVTPLTFSRLYEGEADILISFVVKEHGDFYSFDGPGYSLAHAYP 186

Query: 75  PGSGRGGDAHFDIDEDW 91
           PG G  GD HFD DE+W
Sbjct: 187 PGPGFYGDIHFDDDENW 203


>gi|47168608|pdb|1Q3A|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Matrix
           Metalloproteinase 10
 gi|47168609|pdb|1Q3A|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Matrix
           Metalloproteinase 10
 gi|47168610|pdb|1Q3A|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Matrix
           Metalloproteinase 10
          Length = 165

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 4/92 (4%)

Query: 4   KHHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDG 59
            H   R+ +Y     RD     + +AL VW + + LTF  + +  ADI+I F  + H D 
Sbjct: 13  THLTYRIVNYTPDLPRDAVDSAIEKALKVWEEVTPLTFSRLYEGEADIMISFAVKEHGDN 72

Query: 60  YPFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
           Y FDGPG  LAHA+ PG G  GD HFD DE W
Sbjct: 73  YSFDGPGHSLAHAYPPGPGLYGDIHFDDDEKW 104


>gi|198420757|ref|XP_002125302.1| PREDICTED: similar to matrix metalloproteinase 1 [Ciona
           intestinalis]
          Length = 533

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/105 (43%), Positives = 59/105 (56%), Gaps = 9/105 (8%)

Query: 17  RLRDELRRALDVWSKHSKLTFREV-NDDRADILIYFEKENHWDGYPFDGPGKILAHAFFP 75
           ++  E+R A   W  +S L F +V    RADI I F    H DG PFDGPG+ LAHA+FP
Sbjct: 128 QVETEIRAAFQWWEDNSSLRFSKVAKSQRADIEILFSAGAHGDGDPFDGPGQTLAHAYFP 187

Query: 76  GSGRGGDAHFDIDEDWMVLGVSRSANA------DEGKSLELANAD 114
           GS  GG+AHFD  E W +   S   N       + G SL L+++D
Sbjct: 188 GS--GGNAHFDEAERWSISSGSGKVNLRIVAAHEFGHSLGLSHSD 230


>gi|395840208|ref|XP_003792956.1| PREDICTED: matrix metalloproteinase-17 [Otolemur garnettii]
          Length = 607

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/90 (51%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 9   RVRHYDR----GR--LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPF 62
           RVR + R    GR  +R  +  AL VWS  + L F EV    ADI I F K +H D YPF
Sbjct: 142 RVRTFPRDSALGRDTVRALMYYALKVWSDITPLNFHEVAGSAADIQIDFSKADHNDRYPF 201

Query: 63  DGPGKILAHAFFPGSGR-GGDAHFDIDEDW 91
           DGPG  +AHAFFPG     GD HFD DE W
Sbjct: 202 DGPGGTVAHAFFPGDHHAAGDTHFDDDEAW 231


>gi|417407335|gb|JAA50283.1| Putative matrix metalloproteinase-15, partial [Desmodus rotundus]
          Length = 580

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 126 EAVRRAFRVWEQATPLVFQEVPYQDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 185

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           A+FPG G GGD HFD DE W       S+    G SL L    E
Sbjct: 186 AYFPGPGLGGDTHFDADEPWTF-----SSTDMHGNSLFLVAVHE 224


>gi|410983613|ref|XP_003998133.1| PREDICTED: matrix metalloproteinase-15 [Felis catus]
          Length = 573

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 57  EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 116

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           A+FPG G GGD HFD DE W       S+    G SL L    E
Sbjct: 117 AYFPGPGLGGDTHFDADEPWTF-----SSTDLHGNSLFLVAVHE 155


>gi|5163406|gb|AAD40667.1| matrix metalloproteinase Mmp-11 [Ambystoma mexicanum]
          Length = 123

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 46/68 (67%)

Query: 17  RLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPG 76
           ++R  +  AL VWS  + LTF EV++ RADI+I F +  H D  PFDG G ILAHAFFP 
Sbjct: 51  KVRRTIAEALQVWSSVTSLTFTEVSEGRADIIIDFTRYWHGDNLPFDGSGGILAHAFFPK 110

Query: 77  SGRGGDAH 84
           + R GDAH
Sbjct: 111 THREGDAH 118


>gi|190339264|gb|AAI62135.1| Matrix metalloproteinase 14 (membrane-inserted) beta [Danio rerio]
          Length = 621

 Score = 75.1 bits (183), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 11/101 (10%)

Query: 1   MTLKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVN--------DDRADILIYFE 52
             ++++  +V  Y+     + +R+A  VW   + L FRE++         D ADI+++F 
Sbjct: 119 FCIQNYTPKVGEYET---FEAIRKAFKVWESVTPLRFREISYSDIRDKVVDFADIMLFFA 175

Query: 53  KENHWDGYPFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
              H D  PFDG G  LAHA+FPG+G GGD HFD  E W +
Sbjct: 176 DGFHGDASPFDGEGGFLAHAYFPGNGIGGDTHFDAAEPWTI 216


>gi|301630699|ref|XP_002944454.1| PREDICTED: matrix metalloproteinase-18-like, partial [Xenopus
           (Silurana) tropicalis]
          Length = 301

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     R+++ RA++    VWS    LTF  + D  +DI + F   +H D  PFDG
Sbjct: 76  RILNYTPDMTRNDVDRAIEKAFKVWSDVVPLTFTRIYDRVSDIEMLFAYRDHKDSLPFDG 135

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           P  ILAHAF PG   GGD HFD DE W
Sbjct: 136 PSGILAHAFAPGDNIGGDVHFDEDEKW 162


>gi|395839588|ref|XP_003792670.1| PREDICTED: matrix metalloproteinase-15 [Otolemur garnettii]
          Length = 644

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 161 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGMGGFLAH 220

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGD HFD DE W
Sbjct: 221 AYFPGPGLGGDTHFDADEPW 240


>gi|426382395|ref|XP_004057791.1| PREDICTED: matrix metalloproteinase-15 [Gorilla gorilla gorilla]
          Length = 638

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 162 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 221

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGD HFD DE W
Sbjct: 222 AYFPGPGLGGDTHFDADEPW 241


>gi|443689207|gb|ELT91654.1| hypothetical protein CAPTEDRAFT_219025 [Capitella teleta]
          Length = 529

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 45/104 (43%), Positives = 52/104 (50%), Gaps = 12/104 (11%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWD--GYPFDGPGKILAH 71
           D G  R    +A   WS  + LTF E     ADI I F +  H D  G  FDGPG  LAH
Sbjct: 161 DSGSQRRAFHKAFQYWSDVTPLTFAETGASEADIDIQFARGQHSDGPGNAFDGPGGTLAH 220

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           AFFP     GD HFD DEDW       + N + G +LE+  A E
Sbjct: 221 AFFP---ENGDTHFDEDEDW-------TQNTETGTNLEIVAAHE 254


>gi|291237328|ref|XP_002738587.1| PREDICTED: matrix metalloproteinase 19 isoform rasi-1
           preproprotein-like [Saccoglossus kowalevskii]
          Length = 525

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 57/102 (55%), Gaps = 12/102 (11%)

Query: 16  GRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY--PFDGPGKILAHAF 73
           G++R  + RA  +W+  S LTF EV    ADI I F +  H DGY   FDGPG  LAHA+
Sbjct: 160 GQVRSAIYRAFQLWADVSPLTFTEVASGDADINIEFARWTHSDGYAASFDGPGGTLAHAY 219

Query: 74  FPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           FP     GDAHFD DE + V        +DEG +L +  A E
Sbjct: 220 FP---ENGDAHFDDDETFTVY-------SDEGTNLFIVAAHE 251


>gi|68137220|gb|AAY85550.1| matrix metalloproteinase [Azumapecten farreri]
          Length = 541

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/74 (51%), Positives = 45/74 (60%), Gaps = 4/74 (5%)

Query: 18  LRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGS 77
           +R E+RRA  +W+  + LTFREV    ADI I F   +H DG PFDGP  +LAHAFFP  
Sbjct: 157 VRSEIRRAFALWAAETPLTFREVTRS-ADIEIDFNTGSHGDGSPFDGPSGVLAHAFFP-- 213

Query: 78  GRGGDAHFDIDEDW 91
              G  HFD  E W
Sbjct: 214 -ELGTTHFDDQEQW 226


>gi|355566994|gb|EHH23373.1| hypothetical protein EGK_06828 [Macaca mulatta]
          Length = 470

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/70 (50%), Positives = 44/70 (62%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           +++A  VWS  + L F  +N   ADIL+ F +  H D + FDG G  +AHAF PG G GG
Sbjct: 134 IQKAFQVWSNVTPLKFSRINTGVADILVVFARGAHEDFHAFDGKGGTIAHAFGPGPGIGG 193

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 194 DAHFDDDEFW 203


>gi|35903106|ref|NP_919395.1| matrix metalloproteinase-14 precursor [Danio rerio]
 gi|32251078|gb|AAP74484.1| membrane-type matrix metalloproteinase 1 beta [Danio rerio]
          Length = 621

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 11/101 (10%)

Query: 1   MTLKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVN--------DDRADILIYFE 52
             ++++  +V  Y+     + +R+A  VW   + L FRE++         D ADI+++F 
Sbjct: 119 FCIQNYTPKVGEYET---FEAIRKAFKVWESVTPLRFREISYSDIRDKVVDFADIMLFFA 175

Query: 53  KENHWDGYPFDGPGKILAHAFFPGSGRGGDAHFDIDEDWMV 93
              H D  PFDG G  LAHA+FPG+G GGD HFD  E W +
Sbjct: 176 DGFHGDASPFDGEGGFLAHAYFPGNGIGGDTHFDAAEPWTI 216


>gi|85719961|gb|ABC75549.1| matrix metalloproteinase 9 [Ictalurus punctatus]
          Length = 276

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 47/80 (58%)

Query: 14  DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAF 73
           D   + D   RA  VW   + LTF  + +  ADI+I F K +H D YPFDG   +LAHA+
Sbjct: 134 DASVIDDAFARAFKVWRDVTPLTFTRLYNGIADIMILFGKRDHGDPYPFDGKDGLLAHAY 193

Query: 74  FPGSGRGGDAHFDIDEDWMV 93
            PG G  GDAHFD DE W +
Sbjct: 194 PPGEGVQGDAHFDDDEYWTL 213


>gi|386799505|gb|AFJ38183.1| matrix metalloproteinase [Takifugu rubripes]
          Length = 467

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 43/67 (64%)

Query: 25  ALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGGDAH 84
           A+ +WS  + L F  V  + ADI++ F +  H D +PFDGP  +LAHAF PG G GGD H
Sbjct: 145 AMKMWSDAAPLNFIRVYHNPADIVLSFARRTHGDFFPFDGPRGVLAHAFHPGKGIGGDVH 204

Query: 85  FDIDEDW 91
           FD DE W
Sbjct: 205 FDEDETW 211


>gi|350584968|ref|XP_003127010.3| PREDICTED: matrix metalloproteinase-15, partial [Sus scrofa]
          Length = 644

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 131 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 190

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSANADEGKSLELANADE 115
           A+FPG G GGD HFD DE W       S+    G SL L    E
Sbjct: 191 AYFPGPGLGGDTHFDADEPWTF-----SSTDLHGNSLFLVAVHE 229


>gi|297698857|ref|XP_002826519.1| PREDICTED: matrix metalloproteinase-15 [Pongo abelii]
          Length = 669

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 162 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 221

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGD HFD DE W
Sbjct: 222 AYFPGPGLGGDTHFDADEPW 241


>gi|4505211|ref|NP_002419.1| matrix metalloproteinase-15 preproprotein [Homo sapiens]
 gi|1705988|sp|P51511.1|MMP15_HUMAN RecName: Full=Matrix metalloproteinase-15; Short=MMP-15; AltName:
           Full=Membrane-type matrix metalloproteinase 2;
           Short=MT-MMP 2; Short=MTMMP2; AltName:
           Full=Membrane-type-2 matrix metalloproteinase;
           Short=MT2-MMP; Short=MT2MMP; AltName: Full=SMCP-2;
           Flags: Precursor
 gi|963056|emb|CAA88373.1| membrane-type matrix metalloproteinase 2 [Homo sapiens]
 gi|33585869|gb|AAH55428.1| Matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
 gi|54673588|gb|AAH36495.1| Matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
 gi|116069818|gb|ABJ53423.1| matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
 gi|119603371|gb|EAW82965.1| matrix metallopeptidase 15 (membrane-inserted), isoform CRA_a [Homo
           sapiens]
 gi|119603372|gb|EAW82966.1| matrix metallopeptidase 15 (membrane-inserted), isoform CRA_a [Homo
           sapiens]
 gi|261858710|dbj|BAI45877.1| matrix metallopeptidase 15 [synthetic construct]
          Length = 669

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 162 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 221

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGD HFD DE W
Sbjct: 222 AYFPGPGLGGDTHFDADEPW 241


>gi|380022447|ref|XP_003695057.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-14-like
           [Apis florea]
          Length = 570

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 7/112 (6%)

Query: 8   KRVRHYDRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGK 67
           K  R+  + ++  EL +A  VWS+++ L F +    +  I I FEK  H DG PFDGPG 
Sbjct: 130 KYPRNLPQHKVDAELNKAFKVWSEYTDLVFVQKKSGQVHIEIRFEKGEHGDGDPFDGPGG 189

Query: 68  ILAHAFFPGSGRGGDAHFDIDEDWMV-----LGVSRSANADEGKSLELANAD 114
            LAHA+FP    GGDAHFD  E W +       + + A  + G SL L+++D
Sbjct: 190 TLAHAYFP--VYGGDAHFDDAEQWTIDSFRGTNLFQVAAHEFGHSLGLSHSD 239


>gi|326927194|ref|XP_003209778.1| PREDICTED: matrix metalloproteinase-15-like [Meleagris gallopavo]
          Length = 618

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 8/90 (8%)

Query: 20  DELRRALDVWSKHSKLTFREVNDD--------RADILIYFEKENHWDGYPFDGPGKILAH 71
           + +R+A  VW + + L F+EV  +         ADI++ F    H D  PFDG G  LAH
Sbjct: 116 EAIRQAFRVWEQATPLAFQEVPYEDIRQKRKKEADIMVLFASGFHGDSSPFDGVGGFLAH 175

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W +     S N
Sbjct: 176 AYFPGPGMGGDTHFDSDEPWTLENTDVSGN 205


>gi|373428619|gb|AEY69044.1| matrix metalloproteinase [Thamnodynastes strigatus]
          Length = 287

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 48/88 (54%), Gaps = 5/88 (5%)

Query: 9   RVRHY----DRGRLRDELRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           RV +Y    D   + D   RA  +WS  + LTF        DILI F  +NH D YPFDG
Sbjct: 113 RVVNYSPDLDVASIDDAFSRAFGMWSNVAPLTFTRQEQGNVDILIQFGSQNHGDSYPFDG 172

Query: 65  PGKILAHAFFPGS-GRGGDAHFDIDEDW 91
              +LAHAF PG+    GDAHFD DE W
Sbjct: 173 KNGVLAHAFGPGTYSINGDAHFDEDEFW 200


>gi|296231221|ref|XP_002761064.1| PREDICTED: matrix metalloproteinase-15 [Callithrix jacchus]
          Length = 666

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 47/90 (52%), Gaps = 8/90 (8%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 162 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGSGGFLAH 221

Query: 72  AFFPGSGRGGDAHFDIDEDWMVLGVSRSAN 101
           A+FPG G GGD HFD DE W       + N
Sbjct: 222 AYFPGPGLGGDTHFDADEPWTFSNTDLNGN 251


>gi|301630426|ref|XP_002944322.1| PREDICTED: matrix metalloproteinase-18-like, partial [Xenopus
           (Silurana) tropicalis]
          Length = 237

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 4/87 (4%)

Query: 9   RVRHYDRGRLRDELRRALD----VWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDG 64
           R+ +Y     R+++ RA++    VWS    LTF  + D  +DI + F   +H D  PFDG
Sbjct: 76  RILNYTPDMTRNDVDRAIEKAFKVWSDVVPLTFTRIYDRVSDIEMLFAYRDHKDSLPFDG 135

Query: 65  PGKILAHAFFPGSGRGGDAHFDIDEDW 91
           P  ILAHAF PG   GGD HFD DE W
Sbjct: 136 PSGILAHAFAPGDNIGGDVHFDEDEKW 162


>gi|355710248|gb|EHH31712.1| Matrix metalloproteinase-15, partial [Macaca mulatta]
          Length = 644

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 137 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 196

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGD HFD DE W
Sbjct: 197 AYFPGPGLGGDTHFDADEPW 216


>gi|410929189|ref|XP_003977982.1| PREDICTED: matrix metalloproteinase-14-like [Takifugu rubripes]
          Length = 536

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 8/82 (9%)

Query: 20  DELRRALDVWSKHSKLTFREVN--------DDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +R+A  VW     +TFRE+         D  ADI++ F +  H D  PFDG G  LAH
Sbjct: 109 EAIRKAFRVWESVIPITFREIPYSQIRNKVDKYADIMLSFSEGFHGDSTPFDGEGGFLAH 168

Query: 72  AFFPGSGRGGDAHFDIDEDWMV 93
           AFFPG+  GGD HFD+ E W V
Sbjct: 169 AFFPGNAIGGDTHFDLAEPWTV 190


>gi|403262931|ref|XP_003923818.1| PREDICTED: stromelysin-2 [Saimiri boliviensis boliviensis]
          Length = 477

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 51/91 (56%), Gaps = 4/91 (4%)

Query: 5   HHPKRVRHYDRGRLRDE----LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGY 60
           H   R+  Y     RD     + +AL VW + + LTF ++ +  ADI+I F  + H D Y
Sbjct: 113 HLTYRIMKYTTDLPRDAVDSAIEKALKVWEEVTPLTFSKLYEGEADIMISFAVKEHGDFY 172

Query: 61  PFDGPGKILAHAFFPGSGRGGDAHFDIDEDW 91
            FDGPG  LAHA+ PG G  GD HFD DE W
Sbjct: 173 SFDGPGYSLAHAYPPGPGFYGDIHFDDDEKW 203


>gi|344287946|ref|XP_003415712.1| PREDICTED: matrilysin-like [Loxodonta africana]
          Length = 267

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 44/70 (62%)

Query: 22  LRRALDVWSKHSKLTFREVNDDRADILIYFEKENHWDGYPFDGPGKILAHAFFPGSGRGG 81
           + +AL++WSK   L F+ V    ADI I F +  H D  PFDGPG  LAHAF PG   GG
Sbjct: 129 VAKALNMWSKEIPLRFKRVRWGTADIRIGFARGAHGDYNPFDGPGNTLAHAFAPGPDLGG 188

Query: 82  DAHFDIDEDW 91
           DAHFD DE W
Sbjct: 189 DAHFDEDESW 198


>gi|260820864|ref|XP_002605754.1| hypothetical protein BRAFLDRAFT_121872 [Branchiostoma floridae]
 gi|229291089|gb|EEN61764.1| hypothetical protein BRAFLDRAFT_121872 [Branchiostoma floridae]
          Length = 798

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 57/103 (55%), Gaps = 6/103 (5%)

Query: 3   LKHHPKRVRHYDRGRLRDELRRALDVWSKHSKLTFREVN-DDRADILIYFEKENHWDGYP 61
           L H P       R  +  EL++ALD WS+++ L FR +    R+DI I F    H DG  
Sbjct: 404 LNHTPD----LPRADVERELKKALDTWSEYTPLRFRRLTGSTRSDIEISFAAFGHGDGNS 459

Query: 62  FDGPGKILAHAFFPGSGRGGDAHFDIDEDWMV-LGVSRSANAD 103
           FDG G  LAHA+ PG+G GGD+HFD  E W +  G SR    D
Sbjct: 460 FDGAGGTLAHAYGPGNGIGGDSHFDESETWTINRGSSRPRGID 502


>gi|109128713|ref|XP_001101050.1| PREDICTED: matrix metalloproteinase-15 [Macaca mulatta]
          Length = 669

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 8/80 (10%)

Query: 20  DELRRALDVWSKHSKLTFREV--------NDDRADILIYFEKENHWDGYPFDGPGKILAH 71
           + +RRA  VW + + L F+EV            ADI++ F    H D  PFDG G  LAH
Sbjct: 162 EAVRRAFRVWEQATPLVFQEVPYEDIRLRRQKEADIMVLFASGFHGDSSPFDGTGGFLAH 221

Query: 72  AFFPGSGRGGDAHFDIDEDW 91
           A+FPG G GGD HFD DE W
Sbjct: 222 AYFPGPGLGGDTHFDADEPW 241


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.320    0.140    0.443 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,300,524,446
Number of Sequences: 23463169
Number of extensions: 105028246
Number of successful extensions: 180897
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1649
Number of HSP's successfully gapped in prelim test: 288
Number of HSP's that attempted gapping in prelim test: 178205
Number of HSP's gapped (non-prelim): 1962
length of query: 121
length of database: 8,064,228,071
effective HSP length: 88
effective length of query: 33
effective length of database: 5,999,469,199
effective search space: 197982483567
effective search space used: 197982483567
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)