BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5970
(169 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9R0S3|MMP17_MOUSE Matrix metalloproteinase-17 OS=Mus musculus GN=Mmp17 PE=1 SV=3
Length = 578
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Query: 8 YLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCGLP 62
+L+ FGYL + + L+T+E++++A +FG + TGI+D+ATLALMK PRC LP
Sbjct: 54 WLSRFGYLPPADPAS-GQLQTQEELSKAITAMQQFGGLETTGILDEATLALMKTPRCSLP 112
Query: 63 DTPPLDRRRTKRFTLDGRKWDHTDLTWRV 91
D PP + R KR T KW +L+WRV
Sbjct: 113 DLPPGAQSRRKRQTPPPTKWSKRNLSWRV 141
>sp|Q9ULZ9|MMP17_HUMAN Matrix metalloproteinase-17 OS=Homo sapiens GN=MMP17 PE=1 SV=4
Length = 603
Score = 78.6 bits (192), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Query: 8 YLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCGLP 62
+L+ FGYL ++ L+T+E++++A +FG + TGI+D+ATLALMK PRC LP
Sbjct: 55 WLSRFGYL-PPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLP 113
Query: 63 DTPPLDRRRTKRFTLDGRKWDHTDLTWRV 91
D P L + R +R KW+ +L+WRV
Sbjct: 114 DLPVLTQARRRRQAPAPTKWNKRNLSWRV 142
>sp|Q9Y5R2|MMP24_HUMAN Matrix metalloproteinase-24 OS=Homo sapiens GN=MMP24 PE=2 SV=1
Length = 645
Score = 74.3 bits (181), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 7/92 (7%)
Query: 6 QSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCG 60
Q++L ++GYL +S + L + + + A +F IPVTG++D T+ MKKPRCG
Sbjct: 82 QNWLKSYGYL-LPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCG 140
Query: 61 LPDTPPLD-RRRTKRFTLDGRKWDHTDLTWRV 91
+PD P L RRR KR+ L G+KW +T+ +
Sbjct: 141 VPDHPHLSRRRRNKRYALTGQKWRQKHITYSI 172
>sp|Q99PW6|MMP24_RAT Matrix metalloproteinase-24 OS=Rattus norvegicus GN=Mmp24 PE=2 SV=1
Length = 618
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 6 QSYLANFGYL---EASSNSEIANLRTKEQV-TEARFGNIPVTGIVDDATLALMKKPRCGL 61
Q++L ++GYL E+ +++ + + V T +F IPVTG++D T+ MKKPRCG+
Sbjct: 55 QNWLKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCGV 114
Query: 62 PDTPPLD-RRRTKRFTLDGRKWDHTDLTWRV 91
PD P L RRR KR+ L G+KW +T+ +
Sbjct: 115 PDHPHLSRRRRNKRYALTGQKWRQKHITYSI 145
>sp|Q9R0S2|MMP24_MOUSE Matrix metalloproteinase-24 OS=Mus musculus GN=Mmp24 PE=1 SV=2
Length = 618
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 6 QSYLANFGYL---EASSNSEIANLRTKEQV-TEARFGNIPVTGIVDDATLALMKKPRCGL 61
Q++L ++GYL E+ +++ + + V T +F IPVTG++D T+ MKKPRCG+
Sbjct: 55 QNWLKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKPRCGV 114
Query: 62 PDTPPLD-RRRTKRFTLDGRKWDHTDLTWRV 91
PD P L RRR KR+ L G+KW +T+ +
Sbjct: 115 PDHPHLSRRRRNKRYALTGQKWRQKHITYSI 145
>sp|P51511|MMP15_HUMAN Matrix metalloproteinase-15 OS=Homo sapiens GN=MMP15 PE=1 SV=1
Length = 669
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 11/103 (10%)
Query: 6 QSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCG 60
+++L +GYL S ++ +R+ + + A RF IPVTG++D+ T MK+PRCG
Sbjct: 54 ENWLRLYGYLPQPSR-HMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRCG 112
Query: 61 LPDTPPLD-----RRRTKRFTLDGRKWDHTDLTWRVLSRVDSL 98
+PD + RRR KR+ L GRKW++ LT+ + + + L
Sbjct: 113 VPDQFGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYTEKL 155
>sp|Q9NPA2|MMP25_HUMAN Matrix metalloproteinase-25 OS=Homo sapiens GN=MMP25 PE=1 SV=1
Length = 562
Score = 67.0 bits (162), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 8 YLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCGLP 62
+L +GYL ++ A L++ E++ +A RF +P TG +D T+A M+KPRC LP
Sbjct: 35 WLTRYGYLPPPHPAQ-AQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLP 93
Query: 63 D---TPPLDRRRTKRFTLDGRKWDHTDLTWRVLS 93
D L RRR +R+ L G W LTWRV S
Sbjct: 94 DVLGVAGLVRRR-RRYALSGSVWKKRTLTWRVRS 126
>sp|O54732|MMP15_MOUSE Matrix metalloproteinase-15 OS=Mus musculus GN=Mmp15 PE=2 SV=1
Length = 657
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 11/103 (10%)
Query: 6 QSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCG 60
+++L +GYL S ++ +R+ + + A F IPVTG++D+ T MK+PRCG
Sbjct: 50 ENWLRLYGYLPQPSR-HMSTMRSAQILASALAEMQSFYGIPVTGVLDEETKTWMKRPRCG 108
Query: 61 LPDTPPLD-----RRRTKRFTLDGRKWDHTDLTWRVLSRVDSL 98
+PD + RRR KR+TL G+ W++ LT+ + + + L
Sbjct: 109 VPDQFGVHVKANLRRRRKRYTLTGKAWNNYHLTFSIQNYTEKL 151
>sp|P51512|MMP16_HUMAN Matrix metalloproteinase-16 OS=Homo sapiens GN=MMP16 PE=1 SV=2
Length = 607
Score = 60.5 bits (145), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 5 LQSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRC 59
++ +L +GYL ++ ++ LR+ E + A +F I +TG VD T+ MKKPRC
Sbjct: 43 VEVWLQKYGYL-PPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
Query: 60 GLPDTPPLDRR---RTKRFTLDGRKWDHTDLTWRV 91
G+PD + R KR+ L G+KW H +T+ +
Sbjct: 102 GVPDQTRGSSKFHIRRKRYALTGQKWQHKHITYSI 136
>sp|Q9WTR0|MMP16_MOUSE Matrix metalloproteinase-16 OS=Mus musculus GN=Mmp16 PE=2 SV=3
Length = 607
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 5 LQSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRC 59
++ +L +GYL ++ ++ LR+ E + A +F I +TG VD T+ MKKPRC
Sbjct: 43 VEVWLQKYGYL-PPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
Query: 60 GLPDTPPLDRR---RTKRFTLDGRKWDHTDLTWRV 91
G+PD + R KR+ L G+KW H +T+ +
Sbjct: 102 GVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSI 136
>sp|O35548|MMP16_RAT Matrix metalloproteinase-16 OS=Rattus norvegicus GN=Mmp16 PE=2 SV=1
Length = 607
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 5 LQSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRC 59
++ +L +GYL ++ ++ LR+ E + A +F I +TG VD T+ MKKPRC
Sbjct: 43 VEVWLQKYGYL-PPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRC 101
Query: 60 GLPDTPPLDRR---RTKRFTLDGRKWDHTDLTWRV 91
G+PD + R KR+ L G+KW H +T+ +
Sbjct: 102 GVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSI 136
>sp|Q3U435|MMP25_MOUSE Matrix metalloproteinase-25 OS=Mus musculus GN=Mmp25 PE=2 SV=1
Length = 615
Score = 60.1 bits (144), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 8 YLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCGLP 62
+L +GYL + A +++ E++ +A RF +P TG +D T+ M+KPRC LP
Sbjct: 90 WLTRYGYLPPADPVH-AQMQSLEKLQDAIKVMQRFAGLPETGQMDPMTIKTMRKPRCSLP 148
Query: 63 D---TPPLDRRRTKRFTLDGRKWDHTDLTWRVLS 93
D L RRR +R++L G W LTW + S
Sbjct: 149 DVLGAAGLVRRR-RRYSLSGSVWKKRTLTWSIRS 181
>sp|Q10739|MMP14_RAT Matrix metalloproteinase-14 OS=Rattus norvegicus GN=Mmp14 PE=2 SV=2
Length = 582
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 6 QSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCG 60
+++L +GYL + R+ + ++ A RF + VTG D T+ M++PRCG
Sbjct: 36 EAWLQQYGYL-PPGDLRTHTQRSPQSLSAAIAAMQRFYGLQVTGKADSDTMKAMRRPRCG 94
Query: 61 LPD---TPPLDRRRTKRFTLDGRKWDHTDLTW 89
+PD T R KR+ + G KW H ++T+
Sbjct: 95 VPDKFGTEIKANVRRKRYAIQGLKWQHNEITF 126
>sp|P53690|MMP14_MOUSE Matrix metalloproteinase-14 OS=Mus musculus GN=Mmp14 PE=2 SV=3
Length = 582
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 QSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCG 60
+++L +GYL + R+ + ++ A +F + VTG D AT+ M++PRCG
Sbjct: 36 EAWLQQYGYL-PPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADLATMMAMRRPRCG 94
Query: 61 LPD---TPPLDRRRTKRFTLDGRKWDHTDLTW 89
+PD T R KR+ + G KW H ++T+
Sbjct: 95 VPDKFGTEIKANVRRKRYAIQGLKWQHNEITF 126
>sp|Q99542|MMP19_HUMAN Matrix metalloproteinase-19 OS=Homo sapiens GN=MMP19 PE=1 SV=1
Length = 508
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 8 YLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCGLP 62
YL+ +GYL+ E +N E +TEA +PV+G +DDAT A M++PRCGL
Sbjct: 31 YLSQYGYLQKPL--EGSNNFKPEDITEALRAFQEASELPVSGQLDDATRARMRQPRCGLE 88
Query: 63 DTPPLDRRRTKRFTLDGRKWDHTDLTWRVLSRVDSL 98
D P + ++T ++ L GR W LT+R+L+ +L
Sbjct: 89 D--PFN-QKTLKYLLLGR-WRKKHLTFRILNLPSTL 120
>sp|Q95220|MMP14_RABIT Matrix metalloproteinase-14 OS=Oryctolagus cuniculus GN=MMP14 PE=2
SV=2
Length = 582
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 QSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCG 60
+++L +GYL + R+ + ++ A RF + VTG D T+ M++PRCG
Sbjct: 36 EAWLQQYGYL-PPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADTDTMKAMRRPRCG 94
Query: 61 LPDTPPLDRR---RTKRFTLDGRKWDHTDLTW 89
+PD + + R KR+ + G KW H ++T+
Sbjct: 95 VPDKFGAEIKANVRRKRYAIQGLKWQHNEITF 126
>sp|Q9XT90|MMP14_PIG Matrix metalloproteinase-14 OS=Sus scrofa GN=MMP14 PE=2 SV=1
Length = 580
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 QSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCG 60
+++L +GYL + R+ + ++ A RF + VTG D T+ M++PRCG
Sbjct: 34 EAWLQQYGYL-PPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCG 92
Query: 61 LPDTPPLDRR---RTKRFTLDGRKWDHTDLTW 89
+PD + + R KR+ + G KW H ++T+
Sbjct: 93 VPDKFGAEIKANVRRKRYAIQGLKWQHNEITF 124
>sp|O88766|MMP8_RAT Neutrophil collagenase OS=Rattus norvegicus GN=Mmp8 PE=2 SV=1
Length = 466
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 1 MKTILQSYLANFGYLEASSNSEIANLR-TKEQVTE-ARFGNIPVTGIVDDATLALMKKPR 58
MKT ++YL F +L ++ N E++ E RF +P TG D AT+ +M+KPR
Sbjct: 33 MKTA-ENYLRKFYHLPSNQFRSARNATMIAEKLKEMQRFFGLPETGKPDAATIEIMEKPR 91
Query: 59 CGLPDTPPLDRRRTKRFTLDGRKWDHTDLTWRVLSRVDSL 98
CG+PD+ T KW HT+LT+R+++ +
Sbjct: 92 CGVPDSGDF------LLTPGSPKWTHTNLTYRIINHTPQM 125
>sp|Q9H239|MMP28_HUMAN Matrix metalloproteinase-28 OS=Homo sapiens GN=MMP28 PE=2 SV=2
Length = 520
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 25/109 (22%)
Query: 6 QSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCG 60
+++L +GYL N ++ T + ++A +PV+G++D ATL M +PRCG
Sbjct: 37 EAFLEKYGYL----NEQVPKAPTSTRFSDAIRAFQWVSQLPVSGVLDRATLRQMTRPRCG 92
Query: 61 LPDTPPL----------------DRRRTKRFTLDGRKWDHTDLTWRVLS 93
+ DT RR KRF G KW L++R+++
Sbjct: 93 VTDTNSYAAWAERISDLFARHRTKMRRKKRFAKQGNKWYKQHLSYRLVN 141
>sp|Q8K3F2|MMP21_MOUSE Matrix metalloproteinase-21 OS=Mus musculus GN=Mmp21 PE=2 SV=1
Length = 568
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 45/164 (27%)
Query: 6 QSYLANFGYLEASSNSEIANLRTKEQVTEA--RF---GNIPVTGIVDDATLALMKKPRCG 60
QS+L +G+ E S E A + + +A RF +P +G +D TLA M KPRCG
Sbjct: 54 QSFLLKYGWSEIPSPKESAGVPVGFTLAQAVRRFQKANRLPASGELDSPTLAAMNKPRCG 113
Query: 61 LPD----------TPPL--------DRRRTKRF------TLDGRKWDHTD---------- 86
+PD TPP R R KRF DG++ D +D
Sbjct: 114 VPDTRLPPRAALPTPPALLTSLGLRPRARQKRFLQMLFPKPDGQQEDASDTGASRAFSKK 173
Query: 87 -LTWRVL-----SRVDSLIMKLLLRSVGNIVNSVNSSDFTQNKT 124
LTWR++ S++ + + R + + V DF +++T
Sbjct: 174 TLTWRLVGDAYSSQLSGDEQRYIFRLAFRMWSEVTPLDFREDRT 217
>sp|P50281|MMP14_HUMAN Matrix metalloproteinase-14 OS=Homo sapiens GN=MMP14 PE=1 SV=3
Length = 582
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 QSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCG 60
+++L +GYL + R+ + ++ A +F + VTG D T+ M++PRCG
Sbjct: 36 EAWLQQYGYL-PPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCG 94
Query: 61 LPDTPPLDRR---RTKRFTLDGRKWDHTDLTW 89
+PD + + R KR+ + G KW H ++T+
Sbjct: 95 VPDKFGAEIKANVRRKRYAIQGLKWQHNEITF 126
>sp|Q5RES1|MMP14_PONAB Matrix metalloproteinase-14 OS=Pongo abelii GN=MMP14 PE=2 SV=1
Length = 582
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 6 QSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCG 60
+++L +GYL + R+ + ++ A +F + VTG D T+ M++PRCG
Sbjct: 36 EAWLQQYGYL-PPGDLRTHTQRSPQSLSAAIAAMQKFYGLRVTGKADADTMKAMRRPRCG 94
Query: 61 LPDTPPLDRR---RTKRFTLDGRKWDHTDLTW 89
+PD + + R KR+ + G KW H ++T+
Sbjct: 95 VPDKFGAEIKANVRRKRYAIQGLKWQHNEITF 126
>sp|Q9GLE4|MMP14_BOVIN Matrix metalloproteinase-14 OS=Bos taurus GN=MMP14 PE=2 SV=1
Length = 582
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 6 QSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCG 60
+++L GYL + R+ + ++ A RF + VTG D T+ M++PRCG
Sbjct: 35 EAWLQQHGYL-PPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCG 93
Query: 61 LPDTPPLDRR---RTKRFTLDGRKWDHTDLTW 89
+PD + + R KR+ + G KW H ++T+
Sbjct: 94 VPDKFGAEIKANVRRKRYAIQGLKWQHNEITF 125
>sp|P41245|MMP9_MOUSE Matrix metalloproteinase-9 OS=Mus musculus GN=Mmp9 PE=2 SV=2
Length = 730
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 4 ILQSYLANFGYLEASSN-SEIANLRTKEQVTEARFGNIPVTGIVDDATLALMKKPRCGLP 62
+ ++YL +GY A+ E +LR + + + ++P TG +D TL ++ PRCG+P
Sbjct: 45 LAEAYLYRYGYTRAAQMMGEKQSLRPALLMLQKQL-SLPQTGELDSQTLKAIRTPRCGVP 103
Query: 63 DTPPLDRRRTKRF-TLDGRKWDHTDLTWRVLSRVDSL 98
D RF T G KWDH ++T+ + + + L
Sbjct: 104 D--------VGRFQTFKGLKWDHHNITYWIQNYSEDL 132
>sp|Q9JHI0|MMP19_MOUSE Matrix metalloproteinase-19 OS=Mus musculus GN=Mmp19 PE=2 SV=1
Length = 527
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 2 KTILQSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKK 56
K + YL +GYL+ E A+ E +TEA +P++G +DDAT A MK+
Sbjct: 26 KEAVLDYLLQYGYLQKPL--EGADDFRLEDITEALRTFQEASGLPISGQMDDATRARMKQ 83
Query: 57 PRCGLPDTPPLDRRRTKRFTLDGRKWDHTDLTWRVLSRVDSL 98
PRCGL D P +++ K L W +LT+R+ + +L
Sbjct: 84 PRCGLED--PFNQKSLKYLLLG--HWRKKNLTFRIFNVPSTL 121
>sp|O70138|MMP8_MOUSE Neutrophil collagenase OS=Mus musculus GN=Mmp8 PE=2 SV=2
Length = 465
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 15 LEASSNSEIANLRTKEQVTEARFGNIPVTGIVDDATLALMKKPRCGLPDTPPLDRRRTKR 74
+S N+ + + KE RF ++ TG +D AT+ +M+ PRCG+PD+
Sbjct: 50 FRSSRNATMVAEKLKEM---QRFFSLAETGKLDAATMGIMEMPRCGVPDSGDF------L 100
Query: 75 FTLDGRKWDHTDLTWRVLSRVDSL 98
T KW HT+LT+R+++ L
Sbjct: 101 LTPGSPKWTHTNLTYRIINHTPQL 124
>sp|Q9XSZ5|MMP1_HORSE Interstitial collagenase OS=Equus caballus GN=MMP1 PE=2 SV=1
Length = 469
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 4 ILQSYLANFGYLEASSNSEIANLRTKEQVTE-----ARFGNIPVTGIVDDATLALMKKPR 58
++Q YL N+ Y S +I R + V E F + VTG D TL +MK+PR
Sbjct: 33 MVQKYLENY-YNLKSDGEQIEKQRHRSPVVEKLKQMQEFFGLKVTGKPDAETLNVMKQPR 91
Query: 59 CGLPDTPPLDRRRTKRFTLDGRKWDHTDLTWRV 91
CG+PD T +W++T LT+R+
Sbjct: 92 CGVPDVAEF------VLTEGNPRWENTHLTYRI 118
>sp|Q9EPL5|MMP1A_MOUSE Interstitial collagenase A OS=Mus musculus GN=Mmp1a PE=2 SV=1
Length = 464
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 55/143 (38%), Gaps = 37/143 (25%)
Query: 8 YLANFGYLEASSNSEIANLRTKEQVTE------ARFGNIPVTGIVDDATLALMKKPRCGL 61
YL N Y N + N+ KE + E FG + VTG D TL MKKPRCG+
Sbjct: 35 YLEN--YYNLGKNMQAKNVNGKEMMAEKLRQMQQLFG-LKVTGNSDPETLRAMKKPRCGV 91
Query: 62 PDTPPLDRRRTKRFTLDGRKWDHTDLTW----------------------RVLSRVDSLI 99
PD P T + +W T LT+ RV S V L
Sbjct: 92 PDVAPY------AITHNNPRWTKTHLTYSILNYTPYLPKAVVEDAIARAFRVWSDVTPLT 145
Query: 100 MKLLLRSVGNIVNSVNSSDFTQN 122
+ + G+IV S + D N
Sbjct: 146 FQRVFEEEGDIVLSFHRGDHGDN 168
>sp|P52176|MMP9_BOVIN Matrix metalloproteinase-9 OS=Bos taurus GN=MMP9 PE=2 SV=1
Length = 712
Score = 47.4 bits (111), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 2 KTILQSYLANFGYLEASSNSEIANLRTKEQVTEARFGNIPVTGIVDDATLALMKKPRCGL 61
+ + + YL +GY + SE + + R ++P TG +D TL M+ PRCG+
Sbjct: 42 RQLAEEYLYRYGYTPGAELSEDGQSLQRALLRFQRRLSLPETGELDSTTLNAMRAPRCGV 101
Query: 62 PDTPPLDRRRTKRF-TLDGR-KWDHTDLTWRVLSRVDSL 98
PD RF T +G KW H ++T+ + + + L
Sbjct: 102 PD--------VGRFQTFEGELKWHHHNITYWIQNYSEDL 132
>sp|Q9H306|MMP27_HUMAN Matrix metalloproteinase-27 OS=Homo sapiens GN=MMP27 PE=2 SV=2
Length = 513
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 4 ILQSYLANFGYLEASSNSEIAN-----LRTKEQVTEARFGNIPVTGIVDDATLALMKKPR 58
+ Q+YL F LE N + + + K + +A FG + VTG +D TL +MK PR
Sbjct: 32 LAQAYLNQFYSLEIEGNHLVQSKNRSLIDDKIREMQAFFG-LTVTGKLDSNTLEIMKTPR 90
Query: 59 CGLPDTPPLDRRRTKRFTLDGRKWDHTDLTWRVLS 93
CG+PD +TL G W +LT+R+++
Sbjct: 91 CGVPDVGQYG------YTLPG--WRKYNLTYRIIN 117
>sp|P28053|MMP1_BOVIN Interstitial collagenase OS=Bos taurus GN=MMP1 PE=1 SV=1
Length = 469
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 22/105 (20%)
Query: 5 LQSYLANFGYLEASSNSEIANLRTKEQVTE-----ARFGNIPVTGIVDDATLALMKKPRC 59
++ YL N+ Y S+ ++ R +TE +F + VTG D TL +MK+PRC
Sbjct: 34 VKKYLENY-YNLNSNGKKVERQRNGGLITEKLKQMQKFFGLRVTGKPDAETLNVMKQPRC 92
Query: 60 GLPDTPPLDRRRTKRFTLDGRK--WDHTDLTWRV------LSRVD 96
G+PD P F L K W++T+LT+R+ LSR D
Sbjct: 93 GVPDVAP--------FVLTPGKSCWENTNLTYRIENYTPDLSRAD 129
>sp|P22757|HE_PARLI Hatching enzyme OS=Paracentrotus lividus PE=1 SV=1
Length = 587
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 4 ILQSYLANFGYLEASSNSEIANLRTKEQVTE-ARFGNIPVTGIVDDATLALMKKPRCGLP 62
IL+++L FGY S ANL + + G I TGI+D T L+ PRCG+P
Sbjct: 103 ILKAHLEKFGYTPPGSTFGEANLNYTSAILDFQEHGGINQTGILDADTAELLSTPRCGVP 162
Query: 63 DTPPL 67
D P
Sbjct: 163 DVLPF 167
>sp|Q9EPL6|MMP1B_MOUSE Interstitial collagenase B OS=Mus musculus GN=Mmp1b PE=2 SV=1
Length = 463
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 1 MKTILQSYLANFGYLEASSNSEIANLRTKEQVTE-----ARFGNIPVTGIVDDATLALMK 55
+KT+ + YL N Y N + N+ KE + E + + VTG D TL MK
Sbjct: 29 VKTVWK-YLEN--YYNLGKNMQAKNVNGKEVMAEKLRQMQQLFGLKVTGNSDPETLRAMK 85
Query: 56 KPRCGLPDTPPLDRRRTKRFTLDGRKWDHTDLTWRVLS 93
KPRCG+PD P T + +W T LT+ +L+
Sbjct: 86 KPRCGVPDVAPY------AITHNNPRWTKTHLTYSILN 117
>sp|P22894|MMP8_HUMAN Neutrophil collagenase OS=Homo sapiens GN=MMP8 PE=1 SV=1
Length = 467
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 5 LQSYLANFGYLEA----SSNSEIANLRTKEQVTEARFGNIPVTGIVDDATLALMKKPRCG 60
+Q YL F L + S+ N+ ++ RF + VTG ++ TL +MKKPRCG
Sbjct: 33 VQDYLEKFYQLPSNQYQSTRKNGTNVIVEKLKEMQRFFGLNVTGKPNEETLDMMKKPRCG 92
Query: 61 LPDTPPLDRRRTKRFTLDGRKWDHTDLTWRVLSRVDSLIMKLLLRSV 107
+PD+ T KW+ T+LT+R+ + L + R++
Sbjct: 93 VPDSGGF------MLTPGNPKWERTNLTYRIRNYTPQLSEAEVERAI 133
>sp|P50282|MMP9_RAT Matrix metalloproteinase-9 OS=Rattus norvegicus GN=Mmp9 PE=2 SV=1
Length = 708
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 4 ILQSYLANFGYLEASSN-SEIANLRTKEQVTEARFGNIPVTGIVDDATLALMKKPRCGLP 62
+ + YL +GY A+ E +LR + + + ++P TG +D TL ++ PRCG+P
Sbjct: 45 LAEDYLYRYGYTRAAQMMGEKQSLRPALLMLQKQL-SLPQTGELDSETLKAIRSPRCGVP 103
Query: 63 DTPPLDRRRTKRFTLDGR-KWDHTDLTWRVLSRVDSL 98
D K T DG KW H ++T+ + S + L
Sbjct: 104 DV-------GKFQTFDGDLKWHHHNITYWIQSYTEDL 133
>sp|O62806|MMP13_RABIT Collagenase 3 OS=Oryctolagus cuniculus GN=MMP13 PE=2 SV=1
Length = 471
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 37 FGNIPVTGIVDDATLALMKKPRCGLPDTPPLDRRRTKRFTLDGRKWDHTDLTWRVLSRVD 96
F + VTG +DD TLA+MK+PRCG+PD + TL KW T+LT+R+++
Sbjct: 74 FFGLEVTGKLDDNTLAIMKQPRCGVPD---VGEYNVFPRTL---KWSQTNLTYRIVNYTP 127
Query: 97 SL 98
L
Sbjct: 128 DL 129
>sp|O93470|MMP21_XENLA Matrix metalloproteinase-21 OS=Xenopus laevis GN=mmp21 PE=2 SV=1
Length = 604
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 22 EIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPRCGLPDT 64
E+A Q +A + N+PVTG +DDAT+ M KPRCG+PD
Sbjct: 93 EVAEPTKSPQFIDALKKFQKLNNLPVTGTLDDATINAMNKPRCGVPDN 140
>sp|Q11005|MMP11_XENLA Stromelysin-3 OS=Xenopus laevis GN=mmp11 PE=1 SV=1
Length = 477
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 5/41 (12%)
Query: 57 PRCGLPDTP-PLD----RRRTKRFTLDGRKWDHTDLTWRVL 92
PRCG+PD P P D R R KRF L G +WD T+LT++++
Sbjct: 63 PRCGVPDIPAPPDSSSGRNRQKRFVLSGGRWDKTNLTYKII 103
>sp|P91953|HE_HEMPU 50 kDa hatching enzyme OS=Hemicentrotus pulcherrimus PE=1 SV=1
Length = 591
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 5 LQSYLANFGYLEASSNSEIANLRTKEQVTE-ARFGNIPVTGIVDDATLALMKKPRCGLPD 63
L++ L FGY+ S AN+ + E + G I TGI+D T AL+ PRCG+PD
Sbjct: 107 LKANLEQFGYVPLGSTFGEANINYTSAILEYQQNGGINQTGILDAETAALLDTPRCGVPD 166
Query: 64 TPP 66
P
Sbjct: 167 ILP 169
>sp|Q9GKE1|MMP27_TUPBE Matrix metalloproteinase-27 OS=Tupaia belangeri GN=MMP27 PE=2 SV=1
Length = 512
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 26/115 (22%)
Query: 4 ILQSYLANFGYLE-------ASSNSEIANLRTKEQVTEARFGNIPVTGIVDDATLALMKK 56
+ Q+YL F LE S N + + + +E +A FG + VTG +D TL +MK
Sbjct: 32 LAQAYLNQFYSLEIEGSHLVQSKNGSLLDGKIREM--QAFFG-LTVTGTLDSNTLEIMKT 88
Query: 57 PRCGLPDTPPLDRRRTKRFTLDGRKWDHTDLTWRVL--------SRVDSLIMKLL 103
PRCG+PD +TL G W +LT+R++ + VD I K L
Sbjct: 89 PRCGVPDV------GQYGYTLPG--WRKYNLTYRIMNYTPDMARADVDEAIQKAL 135
>sp|P21692|MMP1_PIG Interstitial collagenase OS=Sus scrofa GN=MMP1 PE=1 SV=2
Length = 469
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 4 ILQSYLANFGYLEASSNSEIANLRTKEQVTE-----ARFGNIPVTGIVDDATLALMKKPR 58
I+Q YL N+ Y S + R V E +F + VTG D TL +MK+PR
Sbjct: 33 IVQKYLKNY-YNLNSDGVPVEKKRNSGLVVEKLKQMQQFFGLKVTGKPDAETLNVMKQPR 91
Query: 59 CGLPDTPPLDRRRTKRFTLDGRKWDHTDLTWRVLSRVDSLIMKLLLRSV 107
CG+PD T +W++T LT+R+ + L + + R++
Sbjct: 92 CGVPDVAEF------VLTPGNPRWENTHLTYRIENYTPDLSREDVDRAI 134
>sp|P09237|MMP7_HUMAN Matrilysin OS=Homo sapiens GN=MMP7 PE=1 SV=1
Length = 267
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 20/108 (18%)
Query: 6 QSYLANFGYLEASSNSEIANLRTKEQVTEARFGNIPVTGIVDDATLALMKKPRCGLPDTP 65
Q YL F YL S +L K + + FG +P+TG+++ + +M+KPRCG+PD
Sbjct: 36 QDYLKRF-YLYDSETKNANSLEAKLKEMQKFFG-LPITGMLNSRVIEIMQKPRCGVPD-- 91
Query: 66 PLDRRRTKRFTL--DGRKWDHTDLTWRVLSR--------VDSLIMKLL 103
++L + KW +T+R++S VD L+ K L
Sbjct: 92 ------VAEYSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRLVSKAL 133
>sp|P24347|MMP11_HUMAN Stromelysin-3 OS=Homo sapiens GN=MMP11 PE=1 SV=3
Length = 488
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 6/43 (13%)
Query: 54 MKKPRCGLPDTPPLD----RRRTKRFTLDGRKWDHTDLTWRVL 92
++ PRCG+PD P D R R KRF L G +W+ TDLT+R+L
Sbjct: 75 LRPPRCGVPD--PSDGLSARNRQKRFVLSGGRWEKTDLTYRIL 115
>sp|Q6Y4Q5|MMP3_CANFA Stromelysin-1 OS=Canis familiaris GN=MMP3 PE=2 SV=1
Length = 478
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 4 ILQSYLANFGYLEASSNSEIANLRTKEQVTEA-----RFGNIPVTGIVDDATLALMKKPR 58
+ Q YL N+ Y R V E +F + VTG VD TLA+M++PR
Sbjct: 33 LTQQYLENY-YNLGKDVKPFVRRRNSGPVVEKIREMQKFLGLEVTGKVDSDTLAMMRRPR 91
Query: 59 CGLPDTPPLDRRRTKRFTLDG-RKWDHTDLTWRVLS--------RVDSLIMKLL 103
CG+PD T G KW T LT+R+++ VDS I K L
Sbjct: 92 CGVPDVGDFT-------TFPGMPKWRKTHLTYRIMNYTPDLPRDAVDSAIEKAL 138
>sp|O18733|MMP9_CANFA Matrix metalloproteinase-9 OS=Canis familiaris GN=MMP9 PE=2 SV=2
Length = 704
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 2 KTILQSYLANFGYLEASSNSEIANLRTKEQVTEARFGNIPVTGIVDDATLALMKKPRCGL 61
K + + YL +GY + + S ++ R +P TG +D TL M+ PRCG+
Sbjct: 42 KQLAEEYLFRYGYTQVAELSNDKQSLSRGLRLLQRRLALPETGELDKTTLEAMRAPRCGV 101
Query: 62 PDTPPLDRRRTKRFTLDGR-KWDHTDLTWRVLSRVDSL 98
PD K T +G KW H D+T+ + + + L
Sbjct: 102 PDL-------GKFQTFEGDLKWHHNDITYWIQNYSEDL 132
>sp|Q499S5|MMP11_RAT Stromelysin-3 OS=Rattus norvegicus GN=Mmp11 PE=1 SV=1
Length = 491
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 58 RCGLPDTPPL--DRRRTKRFTLDGRKWDHTDLTWRVLSRVDSLIMKLLLRSVGN---IVN 112
RCG+PD P + R R KRF L G +W+ TDLT+R+L L+ + + ++V + +
Sbjct: 83 RCGVPDPPDVLNARNRQKRFVLSGGRWEKTDLTYRILRFPWQLVREQVRQTVAEALRVWS 142
Query: 113 SVNSSDFTQ 121
V FT+
Sbjct: 143 EVTPLTFTE 151
>sp|P09238|MMP10_HUMAN Stromelysin-2 OS=Homo sapiens GN=MMP10 PE=1 SV=1
Length = 476
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 19/114 (16%)
Query: 2 KTILQSYLANFGYLEASSNS---EIANLRTKEQVTEARFGNIPVTGIVDDATLALMKKPR 58
K + Q YL + LE + +NL K+ +F + VTG +D TL +M+KPR
Sbjct: 31 KDLAQQYLEKYYNLEKDVKQFRRKDSNLIVKKIQGMQKFLGLEVTGKLDTDTLEVMRKPR 90
Query: 59 CGLPDTPPLDRRRTKRFTLDGR-KWDHTDLTWRVLS--------RVDSLIMKLL 103
CG+PD + G KW T LT+R+++ VDS I K L
Sbjct: 91 CGVPDVGHFS-------SFPGMPKWRKTHLTYRIVNYTPDLPRDAVDSAIEKAL 137
>sp|Q02853|MMP11_MOUSE Stromelysin-3 OS=Mus musculus GN=Mmp11 PE=1 SV=2
Length = 492
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 58 RCGLPDTPPL--DRRRTKRFTLDGRKWDHTDLTWRVLSRVDSLIMKLLLRSVG---NIVN 112
RCG+PD P + R R KRF L G +W+ TDLT+R+L L+ + + ++V + +
Sbjct: 83 RCGVPDLPDVLNARNRQKRFVLSGGRWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWS 142
Query: 113 SVNSSDFTQ 121
V FT+
Sbjct: 143 EVTPLTFTE 151
>sp|P50757|MMP2_RABIT 72 kDa type IV collagenase OS=Oryctolagus cuniculus GN=MMP2 PE=2
SV=1
Length = 662
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 36 RFGNIPVTGIVDDATLALMKKPRCGLPDTPPLDRRRTKRFTLDGRKWDHTDLTWRVLSRV 95
+F +P TG +D +T+ M+KPRCG PD + F KWD +T+R++
Sbjct: 79 KFFGLPQTGELDQSTIETMRKPRCGNPDVANYN------FFPRKPKWDKNQITYRIIGYT 132
Query: 96 DSL 98
L
Sbjct: 133 PDL 135
>sp|Q9GLE5|MMP2_BOVIN 72 kDa type IV collagenase OS=Bos taurus GN=MMP2 PE=2 SV=1
Length = 661
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 36 RFGNIPVTGIVDDATLALMKKPRCGLPDTPPLDRRRTKRFTLDGRKWDHTDLTWRVLSRV 95
+F +P TG +D +T+ M+KPRCG PD + F KWD +T+R++
Sbjct: 80 KFFGLPQTGELDQSTIETMRKPRCGNPDVANYN------FFPRKPKWDKNQITYRIIGYT 133
Query: 96 DSL 98
L
Sbjct: 134 PDL 136
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,990,509
Number of Sequences: 539616
Number of extensions: 1977779
Number of successful extensions: 4556
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 4435
Number of HSP's gapped (non-prelim): 91
length of query: 169
length of database: 191,569,459
effective HSP length: 109
effective length of query: 60
effective length of database: 132,751,315
effective search space: 7965078900
effective search space used: 7965078900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)