Your job contains 1 sequence.
>psy5978
MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELDVPNLQVIKTLQSLKSKGWVNEQFA
WRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQRPDGGRGADDR
MSYRKGPQGVDKKADVGAGSTEVEFKGYGGFGRGKAPPQ
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5978
(159 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0261593 - symbol:RpS10b "Ribosomal protein S10b" s... 490 8.8e-47 1
UNIPROTKB|Q3T0F4 - symbol:RPS10 "40S ribosomal protein S1... 473 5.6e-45 1
UNIPROTKB|P46783 - symbol:RPS10 "40S ribosomal protein S1... 473 5.6e-45 1
UNIPROTKB|F1RZ28 - symbol:RPS10 "Uncharacterized protein"... 473 5.6e-45 1
MGI|MGI:1914347 - symbol:Rps10 "ribosomal protein S10" sp... 473 5.6e-45 1
RGD|621024 - symbol:Rps10 "ribosomal protein S10" species... 473 5.6e-45 1
UNIPROTKB|E1C4N0 - symbol:RPS10 "Uncharacterized protein"... 467 2.4e-44 1
ZFIN|ZDB-GENE-040426-1481 - symbol:rps10 "ribosomal prote... 459 1.7e-43 1
FB|FBgn0027494 - symbol:RpS10a "Ribosomal protein S10a" s... 456 3.5e-43 1
UNIPROTKB|G5E6M8 - symbol:RPS10 "40S ribosomal protein S1... 448 2.5e-42 1
UNIPROTKB|Q9NQ39 - symbol:RPS10P5 "Putative 40S ribosomal... 423 1.1e-39 1
TAIR|locus:2117497 - symbol:AT4G25740 "AT4G25740" species... 380 4.0e-35 1
TAIR|locus:2149579 - symbol:AT5G52650 species:3702 "Arabi... 356 1.4e-32 1
TAIR|locus:2160452 - symbol:RPS10B "AT5G41520" species:37... 349 7.7e-32 1
WB|WBGene00004479 - symbol:rps-10 species:6239 "Caenorhab... 346 1.6e-31 1
UNIPROTKB|O01869 - symbol:rps-10 "Protein RPS-10" species... 346 1.6e-31 1
POMBASE|SPAC31G5.17c - symbol:rps1001 "40S ribosomal prot... 322 5.6e-29 1
POMBASE|SPBP22H7.08 - symbol:rps1002 "40S ribosomal prote... 318 1.5e-28 1
ASPGD|ASPL0000012467 - symbol:AN3706 species:162425 "Emer... 310 1.0e-27 1
DICTYBASE|DDB_G0286117 - symbol:rps10 "40S ribosomal prot... 304 4.5e-27 1
UNIPROTKB|G4NC88 - symbol:MGG_01113 "40S ribosomal protei... 303 5.7e-27 1
SGD|S000005819 - symbol:RPS10A "Protein component of the ... 291 1.1e-25 1
SGD|S000004843 - symbol:RPS10B "Protein component of the ... 288 2.2e-25 1
GENEDB_PFALCIPARUM|PF07_0080 - symbol:PF07_0080 "40S ribo... 286 3.6e-25 1
UNIPROTKB|Q8IBQ5 - symbol:PF07_0080 "40S ribosomal protei... 286 3.6e-25 1
UNIPROTKB|F1PHS5 - symbol:PLEC "Uncharacterized protein" ... 270 2.3e-21 1
UNIPROTKB|E1BF59 - symbol:LOC786966 "Uncharacterized prot... 264 1.0e-20 1
UNIPROTKB|Q15149 - symbol:PLEC "Plectin" species:9606 "Ho... 264 1.0e-20 1
MGI|MGI:1277961 - symbol:Plec "plectin" species:10090 "Mu... 263 1.3e-20 1
RGD|621649 - symbol:Plec "plectin" species:10116 "Rattus ... 262 1.7e-20 1
UNIPROTKB|Q6S3A0 - symbol:Plec "Plectin" species:10116 "R... 262 1.7e-20 1
UNIPROTKB|D4A323 - symbol:Plec "Plectin" species:10116 "R... 262 1.7e-20 1
>FB|FBgn0261593 [details] [associations]
symbol:RpS10b "Ribosomal protein S10b" species:7227
"Drosophila melanogaster" [GO:0003735 "structural constituent of
ribosome" evidence=ISS;IDA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] [GO:0005840 "ribosome" evidence=IDA]
[GO:0006412 "translation" evidence=IC] [GO:0005875 "microtubule
associated complex" evidence=IDA] GO:GO:0005875 EMBL:AE014298
GO:GO:0005840 GO:GO:0003735 InterPro:IPR005326 Pfam:PF03501
eggNOG:COG5045 KO:K02947 GeneTree:ENSGT00440000034918 OMA:VLIAHDC
EMBL:AY070896 RefSeq:NP_001245758.1 RefSeq:NP_608324.1
RefSeq:NP_728273.1 UniGene:Dm.6225 ProteinModelPortal:Q9VWG3
SMR:Q9VWG3 IntAct:Q9VWG3 MINT:MINT-331234 STRING:Q9VWG3
PaxDb:Q9VWG3 PRIDE:Q9VWG3 EnsemblMetazoa:FBtr0074731
EnsemblMetazoa:FBtr0074732 EnsemblMetazoa:FBtr0308192 GeneID:32953
KEGG:dme:Dmel_CG14206 CTD:32953 FlyBase:FBgn0261593
InParanoid:Q9VWG3 OrthoDB:EOG4RN8RX PhylomeDB:Q9VWG3
GenomeRNAi:32953 NextBio:781222 Bgee:Q9VWG3 GermOnline:CG14206
Uniprot:Q9VWG3
Length = 160
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 99/159 (62%), Positives = 117/159 (73%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELD-VPNLQVIKTLQSLKSKGWVNEQF 59
M MPK +R IYEYLFKEGV+VAKKDFHA KHPEL+ +PNL VIK +QSL S+G V EQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 60 AWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQR-P-DGGRGA 117
AWRHYYWY+TN+GIE+LR L++P EIVPSTLKR AR+ P R P D +
Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120
Query: 118 DDRMSYRKGP--QGVDKKADVGAGSTEVEFKGYGGFGRG 154
+DR +YR+ P GVDKK DVG G+ EVEF+G GFGRG
Sbjct: 121 EDRSAYRRAPGGSGVDKKGDVGPGAGEVEFRG--GFGRG 157
>UNIPROTKB|Q3T0F4 [details] [associations]
symbol:RPS10 "40S ribosomal protein S10" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=ISS] [GO:0005840
"ribosome" evidence=IEA] GO:GO:0005730 GO:GO:0005840
InterPro:IPR005326 Pfam:PF03501 eggNOG:COG5045 HOGENOM:HOG000216624
KO:K02947 GeneTree:ENSGT00440000034918 HOVERGEN:HBG001253
EMBL:BC102416 IPI:IPI00701135 RefSeq:NP_001029888.1 UniGene:Bt.3921
ProteinModelPortal:Q3T0F4 SMR:Q3T0F4 IntAct:Q3T0F4 STRING:Q3T0F4
PRIDE:Q3T0F4 Ensembl:ENSBTAT00000020719 GeneID:540965
KEGG:bta:540965 CTD:6204 InParanoid:Q3T0F4 OrthoDB:EOG47SSFW
NextBio:20878936 ArrayExpress:Q3T0F4 Uniprot:Q3T0F4
Length = 165
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 99/168 (58%), Positives = 123/168 (73%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPEL---DVPNLQVIKTLQSLKSKGWVNE 57
MLMPKKNR IYE LFKEGV+VAKKD H PKHPEL +VPNL V+K +QSLKS+G+V E
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMT-QRPDG-GR 115
QFAWRH+YWY+TN+GI+ LR L++P EIVP+TL+R T + P+ + +RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPR-PKGLEGERPARLTR 119
Query: 116 GADDRMSYRKG--PQGVDKKADVGAGS-TEVEFKGYGGFGRGKA-PPQ 159
G DR +YR+ P G DKKA+ GAGS TE +F+G GFGRG+ PPQ
Sbjct: 120 GEADRDTYRRSAVPPGADKKAEAGAGSATEFQFRG--GFGRGRGQPPQ 165
>UNIPROTKB|P46783 [details] [associations]
symbol:RPS10 "40S ribosomal protein S10" species:9606 "Homo
sapiens" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0006412 "translation" evidence=IC;TAS]
[GO:0005840 "ribosome" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
Reactome:REACT_116125 GO:GO:0005730 EMBL:CH471081 GO:GO:0000184
GO:GO:0006413 GO:GO:0006415 GO:GO:0006414 GO:GO:0022627
Reactome:REACT_1762 GO:GO:0006614 GO:GO:0019083 InterPro:IPR005326
Pfam:PF03501 Orphanet:124 eggNOG:COG5045 KO:K02947
HOVERGEN:HBG001253 CTD:6204 OrthoDB:EOG47SSFW EMBL:U14972
EMBL:AK311797 EMBL:AL157372 EMBL:BC001032 EMBL:BC001955
EMBL:BC005012 EMBL:BC070235 EMBL:BC071946 EMBL:BC073799
EMBL:AB007151 IPI:IPI00008438 PIR:S55918 RefSeq:NP_001005.1
RefSeq:NP_001190174.1 RefSeq:NP_001191020.1 UniGene:Hs.406620
UniGene:Hs.645317 ProteinModelPortal:P46783 SMR:P46783
IntAct:P46783 MINT:MINT-5001020 STRING:P46783 PhosphoSite:P46783
DMDM:1173177 PaxDb:P46783 PRIDE:P46783 DNASU:6204
Ensembl:ENST00000326199 GeneID:6204 KEGG:hsa:6204 UCSC:uc003ojm.3
GeneCards:GC06M034514 H-InvDB:HIX0201612 HGNC:HGNC:10383 MIM:603632
MIM:613308 neXtProt:NX_P46783 PharmGKB:PA34779 PhylomeDB:P46783
GenomeRNAi:6204 NextBio:24095 ArrayExpress:P46783 Bgee:P46783
CleanEx:HS_RPS10 Genevestigator:P46783 GermOnline:ENSG00000124614
Uniprot:P46783
Length = 165
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 99/168 (58%), Positives = 123/168 (73%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPEL---DVPNLQVIKTLQSLKSKGWVNE 57
MLMPKKNR IYE LFKEGV+VAKKD H PKHPEL +VPNL V+K +QSLKS+G+V E
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMT-QRPDG-GR 115
QFAWRH+YWY+TN+GI+ LR L++P EIVP+TL+R T + P+ + +RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPR-PKGLEGERPARLTR 119
Query: 116 GADDRMSYRKG--PQGVDKKADVGAGS-TEVEFKGYGGFGRGKA-PPQ 159
G DR +YR+ P G DKKA+ GAGS TE +F+G GFGRG+ PPQ
Sbjct: 120 GEADRDTYRRSAVPPGADKKAEAGAGSATEFQFRG--GFGRGRGQPPQ 165
>UNIPROTKB|F1RZ28 [details] [associations]
symbol:RPS10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] GO:GO:0005730
GO:GO:0022627 InterPro:IPR005326 Pfam:PF03501 KO:K02947
GeneTree:ENSGT00440000034918 OMA:VLIAHDC CTD:6204 EMBL:CU468519
RefSeq:NP_001231035.1 UniGene:Ssc.23186 Ensembl:ENSSSCT00000001703
GeneID:100155444 KEGG:ssc:100155444 Uniprot:F1RZ28
Length = 165
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 99/168 (58%), Positives = 123/168 (73%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPEL---DVPNLQVIKTLQSLKSKGWVNE 57
MLMPKKNR IYE LFKEGV+VAKKD H PKHPEL +VPNL V+K +QSLKS+G+V E
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMT-QRPDG-GR 115
QFAWRH+YWY+TN+GI+ LR L++P EIVP+TL+R T + P+ + +RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPR-PKGLEGERPARFTR 119
Query: 116 GADDRMSYRKG--PQGVDKKADVGAGS-TEVEFKGYGGFGRGKA-PPQ 159
G DR +YR+ P G DKKA+ GAGS TE +F+G GFGRG+ PPQ
Sbjct: 120 GEADRDTYRRSAVPPGADKKAEAGAGSATEFQFRG--GFGRGRGQPPQ 165
>MGI|MGI:1914347 [details] [associations]
symbol:Rps10 "ribosomal protein S10" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] MGI:MGI:1914347 GO:GO:0005730 GO:GO:0005840
InterPro:IPR005326 Pfam:PF03501 eggNOG:COG5045 HOGENOM:HOG000216624
KO:K02947 OMA:VLIAHDC HOVERGEN:HBG001253 CTD:6204 OrthoDB:EOG47SSFW
EMBL:AK008797 EMBL:AK011065 EMBL:AK002558 EMBL:BC003853
EMBL:BC019725 IPI:IPI00112448 PIR:H59404 RefSeq:NP_080239.1
UniGene:Mm.383217 UniGene:Mm.490323 ProteinModelPortal:P63325
SMR:P63325 IntAct:P63325 STRING:P63325 PhosphoSite:P63325
PaxDb:P63325 PRIDE:P63325 Ensembl:ENSMUST00000114881
Ensembl:ENSMUST00000114882 Ensembl:ENSMUST00000178774 GeneID:67097
KEGG:mmu:67097 InParanoid:P63325 NextBio:323566 Bgee:P63325
CleanEx:MM_RPS10 Genevestigator:P63325 Uniprot:P63325
Length = 165
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 98/167 (58%), Positives = 120/167 (71%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPEL---DVPNLQVIKTLQSLKSKGWVNE 57
MLMPKKNR IYE LFKEGV+VAKKD H PKHPEL +VPNL V+K +QSLKS+G+V E
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQRPDG-GRG 116
QFAWRH+YWY+TN+GI+ LR L++P EIVP+TL+R T + +RP RG
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPRPKGPEGERPARFTRG 120
Query: 117 ADDRMSYRKG--PQGVDKKADVGAGS-TEVEFKGYGGFGRGKA-PPQ 159
DR +YR+ P G DKKA+ GAGS TE +F+G GFGRG+ PPQ
Sbjct: 121 EADRDTYRRSAVPPGADKKAEAGAGSATEFQFRG--GFGRGRGQPPQ 165
>RGD|621024 [details] [associations]
symbol:Rps10 "ribosomal protein S10" species:10116 "Rattus
norvegicus" [GO:0000028 "ribosomal small subunit assembly"
evidence=IMP] [GO:0003735 "structural constituent of ribosome"
evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISO;IDA] RGD:621024
GO:GO:0005730 GO:GO:0003735 GO:GO:0000028 GO:GO:0022627
InterPro:IPR005326 Pfam:PF03501 UniGene:Rn.3359 eggNOG:COG5045
HOGENOM:HOG000216624 KO:K02947 GeneTree:ENSGT00440000034918
HOVERGEN:HBG001253 CTD:6204 EMBL:X13549 EMBL:BC058141
IPI:IPI00191142 PIR:S01881 RefSeq:NP_001020228.2 RefSeq:NP_112371.1
RefSeq:XP_002729669.1 RefSeq:XP_003754221.1 UniGene:Rn.163379
ProteinModelPortal:P63326 SMR:P63326 IntAct:P63326 STRING:P63326
PhosphoSite:P63326 PRIDE:P63326 Ensembl:ENSRNOT00000033907
GeneID:100363439 GeneID:502176 GeneID:81773 KEGG:rno:100363439
KEGG:rno:502176 KEGG:rno:81773 UCSC:RGD:621024 CTD:100363439
InParanoid:P63326 NextBio:615593 ArrayExpress:P63326
Genevestigator:P63326 GermOnline:ENSRNOG00000030106 Uniprot:P63326
Length = 165
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 98/167 (58%), Positives = 120/167 (71%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPEL---DVPNLQVIKTLQSLKSKGWVNE 57
MLMPKKNR IYE LFKEGV+VAKKD H PKHPEL +VPNL V+K +QSLKS+G+V E
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQRPDG-GRG 116
QFAWRH+YWY+TN+GI+ LR L++P EIVP+TL+R T + +RP RG
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPRPKGPEGERPARFTRG 120
Query: 117 ADDRMSYRKG--PQGVDKKADVGAGS-TEVEFKGYGGFGRGKA-PPQ 159
DR +YR+ P G DKKA+ GAGS TE +F+G GFGRG+ PPQ
Sbjct: 121 EADRDTYRRSAVPPGADKKAEAGAGSATEFQFRG--GFGRGRGQPPQ 165
>UNIPROTKB|E1C4N0 [details] [associations]
symbol:RPS10 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA] GO:GO:0005730
GO:GO:0022627 InterPro:IPR005326 Pfam:PF03501
GeneTree:ENSGT00440000034918 OMA:VLIAHDC EMBL:AADN02045045
EMBL:AADN02045044 IPI:IPI00584482 PRIDE:E1C4N0
Ensembl:ENSGALT00000004446 NextBio:20822894 Uniprot:E1C4N0
Length = 165
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 97/167 (58%), Positives = 122/167 (73%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPEL---DVPNLQVIKTLQSLKSKGWVNE 57
MLMPKKNR IYE LFKEGV+VAKKD H PKHPEL +VPNL V+K +QSLKS+G+V E
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELVDKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMT-QRPDG-GR 115
QFAWRH+YWY+TN+GI+ LR L++P EIVP+TL+R T + P+ + +RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPR-PKGLEGERPARLTR 119
Query: 116 GADDRMSYRKG--PQGVDKKADVGAGS-TEVEFKGYGGFGRGKAPPQ 159
G DR +YR+ P G DKKA+ GAG+ TE +F+G G GRG+ PPQ
Sbjct: 120 GEADRDTYRRSAVPPGADKKAEAGAGAATEFQFRGGFGHGRGQ-PPQ 165
>ZFIN|ZDB-GENE-040426-1481 [details] [associations]
symbol:rps10 "ribosomal protein S10" species:7955
"Danio rerio" [GO:0005840 "ribosome" evidence=IEA]
ZFIN:ZDB-GENE-040426-1481 GO:GO:0005840 InterPro:IPR005326
Pfam:PF03501 eggNOG:COG5045 HOGENOM:HOG000216624 KO:K02947
GeneTree:ENSGT00440000034918 OMA:VLIAHDC HOVERGEN:HBG001253
CTD:6204 OrthoDB:EOG47SSFW EMBL:CU694224 EMBL:BC055098
EMBL:BC067658 IPI:IPI00489853 RefSeq:NP_957440.1 UniGene:Dr.75584
STRING:Q7T1J9 Ensembl:ENSDART00000045901 GeneID:394121
KEGG:dre:394121 NextBio:20815074 Uniprot:Q7T1J9
Length = 166
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 97/168 (57%), Positives = 120/168 (71%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPEL---DVPNLQVIKTLQSLKSKGWVNE 57
MLMPKKNR IYE LFKEGV+VAKKD H KHPEL +VPNL V+K +QSLKS G+V E
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHLAKHPELADKNVPNLHVMKAMQSLKSCGYVKE 60
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMT-QRPDG-GR 115
QFAWRH+YWY+TN+GI+ LR L++P EIVP+TL+RQ R A P+ + +RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRPETARPRPKGLEGERPARLAR 120
Query: 116 GADDRMSYRKGPQ--GVDKKADVGAGS-TEVEFKGYGGFGRGKAP-PQ 159
G DR +YR+ G DKKA+ GAG+ TE +F+G GFGRG+ PQ
Sbjct: 121 GEGDRDAYRRSAAQPGADKKAEAGAGAATEFQFRG--GFGRGRGQQPQ 166
>FB|FBgn0027494 [details] [associations]
symbol:RpS10a "Ribosomal protein S10a" species:7227
"Drosophila melanogaster" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=ISS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0006412 "translation" evidence=IC] [GO:0022008 "neurogenesis"
evidence=IMP] EMBL:AE014297 GO:GO:0022008 GO:GO:0005840
InterPro:IPR005326 Pfam:PF03501 eggNOG:COG5045 KO:K02947
EMBL:AF145693 RefSeq:NP_651576.1 ProteinModelPortal:Q9VB14
SMR:Q9VB14 STRING:Q9VB14 PaxDb:Q9VB14 PRIDE:Q9VB14
EnsemblMetazoa:FBtr0085194 GeneID:43321 KEGG:dme:Dmel_CG12275
CTD:43321 FlyBase:FBgn0027494 GeneTree:ENSGT00440000034918
InParanoid:Q9VB14 OMA:FRVISIY OrthoDB:EOG4H70V0 PhylomeDB:Q9VB14
GenomeRNAi:43321 NextBio:833335 Bgee:Q9VB14 GermOnline:CG12275
Uniprot:Q9VB14
Length = 163
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 96/161 (59%), Positives = 116/161 (72%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELD-VPNLQVIKTLQSLKSKGWVNEQF 59
M +PK NR IYEYLFKEGVLVAKKD KH ELD +PNLQVIK +QSL S+GWV EQF
Sbjct: 1 MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQF 60
Query: 60 AWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQRPDGGRGA-- 117
AWRH+YW +TN+GIE+LR L++P EIVPSTL + R+ +A + PR P GG G
Sbjct: 61 AWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRS-NAVR-PRGGPGGPGGGFGGAS 118
Query: 118 ---DDRMSYRKGP--QGVDKKADVGAGSTEVEFKGYGGFGR 153
DDR +YR+GP G+DKK DVGAG+ VE++G GFGR
Sbjct: 119 KTDDDRSNYRRGPGAYGMDKKGDVGAGTGRVEYRG--GFGR 157
>UNIPROTKB|G5E6M8 [details] [associations]
symbol:RPS10 "40S ribosomal protein S10" species:9913 "Bos
taurus" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] GO:GO:0005730
GO:GO:0022627 InterPro:IPR005326 Pfam:PF03501
GeneTree:ENSGT00440000034918 OMA:VLIAHDC EMBL:DAAA02054924
Ensembl:ENSBTAT00000064864 Uniprot:G5E6M8
Length = 181
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 100/180 (55%), Positives = 124/180 (68%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPEL---DVPNLQVIKTLQSLKSKGWVNE 57
MLMPKKNR IYE LFKEGV+VAKKD H PKHPEL +VPNL V+K +QSLKS+G+V E
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMT-QRPDG-GR 115
QFAWRH+YWY+TN+GI+ LR L++P EIVP+TL+R T + P+ + +RP R
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETGRPR-PKGLEGERPARLTR 119
Query: 116 GADDRMSYRKG--PQ------------GVDKKADVGAGS-TEVEFKGYGGFGRGKA-PPQ 159
G DR +YR+ PQ G DKKA+ GAGS TE +F+G GFGRG+ PPQ
Sbjct: 120 GEADRDTYRRSAVPQVVICDIKARYKTGADKKAEAGAGSATEFQFRG--GFGRGRGQPPQ 177
>UNIPROTKB|Q9NQ39 [details] [associations]
symbol:RPS10P5 "Putative 40S ribosomal protein S10-like"
species:9606 "Homo sapiens" [GO:0005840 "ribosome" evidence=IEA]
GO:GO:0005840 EMBL:AL118502 InterPro:IPR005326 Pfam:PF03501
eggNOG:COG5045 IPI:IPI00025842 ProteinModelPortal:Q9NQ39 SMR:Q9NQ39
IntAct:Q9NQ39 STRING:Q9NQ39 DMDM:74752896 PaxDb:Q9NQ39 PRIDE:Q9NQ39
GeneCards:GC20M000820 HGNC:HGNC:15795 neXtProt:NX_Q9NQ39
HOVERGEN:HBG001253 InParanoid:Q9NQ39 PhylomeDB:Q9NQ39
Genevestigator:Q9NQ39 Uniprot:Q9NQ39
Length = 176
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 97/177 (54%), Positives = 118/177 (66%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPEL---DVPNLQVIKTLQSLKSKGWVNE 57
MLMPKKNR I+E LFKEGV+VAKKD H PKHPEL +VPNL V+K +QSLKS+G V E
Sbjct: 1 MLMPKKNRIAIHELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGCVKE 60
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDAS-KVPRQMTQRP----- 111
QFAWRH+YWY+TN+G + LR L++P EIVP+TL A+ R T RP
Sbjct: 61 QFAWRHFYWYLTNEGSQYLRDYLHLPPEIVPATLHLPPEIVPATLHRSRPETGRPRPKGL 120
Query: 112 DGGRGAD------DRMSYRKG--PQGVDKKADVGAGS-TEVEFKGYGGFGRGKAPPQ 159
+G R A DR +YR+ P G DKKA+ GAGS TE +F+G G GRG+ PPQ
Sbjct: 121 EGKRPARLTRREADRDTYRRCSVPPGADKKAEAGAGSATEFQFRGRCGRGRGQ-PPQ 176
>TAIR|locus:2117497 [details] [associations]
symbol:AT4G25740 "AT4G25740" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS;IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 EMBL:AL161563 EMBL:AL049480
GO:GO:0022627 InterPro:IPR005326 Pfam:PF03501 EMBL:AY035172
EMBL:AY113926 IPI:IPI00517911 PIR:T04228 RefSeq:NP_194304.1
UniGene:At.22650 UniGene:At.28644 ProteinModelPortal:Q9SW09
SMR:Q9SW09 IntAct:Q9SW09 STRING:Q9SW09 PaxDb:Q9SW09 PRIDE:Q9SW09
EnsemblPlants:AT4G25740.1 GeneID:828679 KEGG:ath:AT4G25740
GeneFarm:433 TAIR:At4g25740 eggNOG:COG5045 HOGENOM:HOG000216624
InParanoid:Q9SW09 KO:K02947 OMA:WALLIRI PhylomeDB:Q9SW09
ProtClustDB:CLSN2916079 Genevestigator:Q9SW09 Uniprot:Q9SW09
Length = 177
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 84/163 (51%), Positives = 104/163 (63%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELDVPNLQVIKTLQSLKSKGWVNEQFA 60
M++ + NR I +YLFKEGV AKKDF+ PKHP +DVPNLQVIK +QS KSK +V E FA
Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60
Query: 61 WRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQA----RTTDASKVPRQM-TQRPDGGR 115
W HYYW++TN+GIE LR LN+P ++VP+TLK+ A R RQ R DG R
Sbjct: 61 WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDR 120
Query: 116 GA-DDRMSYRKGPQGVDKKADVGAGSTEVEFKGYGG---FGRG 154
DR YR GP+G D+K A + F+G GG FGRG
Sbjct: 121 PRFGDRDGYRGGPRGGDEKGGAPA-DFQPSFQGGGGRPGFGRG 162
>TAIR|locus:2149579 [details] [associations]
symbol:AT5G52650 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0016020 EMBL:AB025606
GO:GO:0022627 InterPro:IPR005326 Pfam:PF03501 UniGene:At.28644
eggNOG:COG5045 HOGENOM:HOG000216624 KO:K02947
ProtClustDB:CLSN2916079 EMBL:AY065217 EMBL:AY088678 EMBL:AY122932
IPI:IPI00526318 RefSeq:NP_200077.1 ProteinModelPortal:Q9LTF2
SMR:Q9LTF2 IntAct:Q9LTF2 STRING:Q9LTF2 PaxDb:Q9LTF2 PRIDE:Q9LTF2
EnsemblPlants:AT5G52650.1 GeneID:835342 KEGG:ath:AT5G52650
GeneFarm:432 TAIR:At5g52650 InParanoid:Q9LTF2 OMA:HGDIDTK
PhylomeDB:Q9LTF2 Genevestigator:Q9LTF2 GermOnline:AT5G52650
Uniprot:Q9LTF2
Length = 179
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 79/164 (48%), Positives = 102/164 (62%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELDVPNLQVIKTLQSLKSKGWVNEQFA 60
M++ + NR I +YLFKEGV AKKDF+ KHP +DVPNLQVIK +QS KSK +V E FA
Sbjct: 1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60
Query: 61 WRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQA----RTTDASKVPRQMTQRPDGGRG 116
W HYYW++TN+GIE LR LN+P ++VP+TLK+ A R R R +GG
Sbjct: 61 WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRGPRHEGGDR 120
Query: 117 A--DDRMSYRKGPQ-GVDKKADVGAGSTEVE--FKGYG-GFGRG 154
DR YR GP+ G + + G + + F+G G GFGRG
Sbjct: 121 PRFGDRDGYRAGPRAGGEFGGEKGGAPADYQPSFQGSGRGFGRG 164
>TAIR|locus:2160452 [details] [associations]
symbol:RPS10B "AT5G41520" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS;IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0010252 "auxin homeostasis"
evidence=IGI] [GO:0090506 "axillary shoot meristem initiation"
evidence=IGI] [GO:2000032 "regulation of secondary shoot formation"
evidence=IGI] EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0009507 EMBL:AB005233 GO:GO:0090506 GO:GO:2000032
GO:GO:0022627 GO:GO:0010252 InterPro:IPR005326 Pfam:PF03501
eggNOG:COG5045 HOGENOM:HOG000216624 KO:K02947 EMBL:AY037240
EMBL:AF375440 EMBL:AY060539 IPI:IPI00516966 RefSeq:NP_198967.1
UniGene:At.67807 UniGene:At.8336 ProteinModelPortal:Q9FFS8
SMR:Q9FFS8 IntAct:Q9FFS8 STRING:Q9FFS8 PaxDb:Q9FFS8 PRIDE:Q9FFS8
EnsemblPlants:AT5G41520.1 GeneID:834154 KEGG:ath:AT5G41520
GeneFarm:431 TAIR:At5g41520 InParanoid:Q9FFS8 OMA:ILYLREY
PhylomeDB:Q9FFS8 ProtClustDB:CLSN2914905 Genevestigator:Q9FFS8
GermOnline:AT5G41520 Uniprot:Q9FFS8
Length = 180
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 79/167 (47%), Positives = 102/167 (61%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELD-VPNLQVIKTLQSLKSKGWVNEQF 59
M++ + NR I +YLFKEGVL AKKDF+ P+HP ++ VPNLQVIK +QS KSK +V E F
Sbjct: 1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60
Query: 60 AWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTD-----ASKVPRQMTQRPDGG 114
AW HYYW++TN+GI+ LR LN+P EIVP+TLK+Q + PR R DG
Sbjct: 61 AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGGGGDRPRG-PPRGDGE 119
Query: 115 RGADDRMSYRKGPQGVDKKADVGAGSTEVE--FKGYGG-----FGRG 154
R DR YR GP+ + D + + F+G G FGRG
Sbjct: 120 RRFGDRDGYRGGPKSGGEYGDKAGAPADYQPGFRGGAGGARQGFGRG 166
>WB|WBGene00004479 [details] [associations]
symbol:rps-10 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0006915 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0000003 InterPro:IPR005326
Pfam:PF03501 EMBL:FO080863 eggNOG:COG5045 HOGENOM:HOG000216624
KO:K02947 OMA:ILYLREY GeneTree:ENSGT00440000034918 PIR:T30925
RefSeq:NP_491398.1 ProteinModelPortal:O01869 SMR:O01869
DIP:DIP-25833N IntAct:O01869 MINT:MINT-1039592 STRING:O01869
PaxDb:O01869 EnsemblMetazoa:D1007.6.1 EnsemblMetazoa:D1007.6.2
GeneID:172061 KEGG:cel:CELE_D1007.6 UCSC:D1007.6.2 CTD:172061
WormBase:D1007.6 InParanoid:O01869 NextBio:873855 Uniprot:O01869
Length = 149
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 78/161 (48%), Positives = 102/161 (63%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELD-VPNLQVIKTLQSLKSKGWVNEQF 59
M +PK + +IYEYLF EGV VAKKDF+A HP ++ V NL+VIKTL+SL S+ V EQF
Sbjct: 1 MFIPKSHTKLIYEYLFNEGVTVAKKDFNAKTHPNIEGVSNLEVIKTLKSLASRELVKEQF 60
Query: 60 AWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQRPDGGRGAD- 118
AWRHYYWY+T+ GI LR L +P EIVP+T+K + R +VP + + P +G
Sbjct: 61 AWRHYYWYLTDAGILYLREYLALPAEIVPATIKTKPREI---RVPHE-DRAPRAAQGEKG 116
Query: 119 DRMSYRKGPQGVDKKADVGAGSTEVEFKGYGGFGRGKAPPQ 159
DR +YR +K + G G V ++ GFGRG PPQ
Sbjct: 117 DREAYR-----TEKVTEAGPGGAPV-YRA--GFGRGAPPPQ 149
>UNIPROTKB|O01869 [details] [associations]
symbol:rps-10 "Protein RPS-10" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0006915 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0000003 InterPro:IPR005326
Pfam:PF03501 EMBL:FO080863 eggNOG:COG5045 HOGENOM:HOG000216624
KO:K02947 OMA:ILYLREY GeneTree:ENSGT00440000034918 PIR:T30925
RefSeq:NP_491398.1 ProteinModelPortal:O01869 SMR:O01869
DIP:DIP-25833N IntAct:O01869 MINT:MINT-1039592 STRING:O01869
PaxDb:O01869 EnsemblMetazoa:D1007.6.1 EnsemblMetazoa:D1007.6.2
GeneID:172061 KEGG:cel:CELE_D1007.6 UCSC:D1007.6.2 CTD:172061
WormBase:D1007.6 InParanoid:O01869 NextBio:873855 Uniprot:O01869
Length = 149
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 78/161 (48%), Positives = 102/161 (63%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELD-VPNLQVIKTLQSLKSKGWVNEQF 59
M +PK + +IYEYLF EGV VAKKDF+A HP ++ V NL+VIKTL+SL S+ V EQF
Sbjct: 1 MFIPKSHTKLIYEYLFNEGVTVAKKDFNAKTHPNIEGVSNLEVIKTLKSLASRELVKEQF 60
Query: 60 AWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQRPDGGRGAD- 118
AWRHYYWY+T+ GI LR L +P EIVP+T+K + R +VP + + P +G
Sbjct: 61 AWRHYYWYLTDAGILYLREYLALPAEIVPATIKTKPREI---RVPHE-DRAPRAAQGEKG 116
Query: 119 DRMSYRKGPQGVDKKADVGAGSTEVEFKGYGGFGRGKAPPQ 159
DR +YR +K + G G V ++ GFGRG PPQ
Sbjct: 117 DREAYR-----TEKVTEAGPGGAPV-YRA--GFGRGAPPPQ 149
>POMBASE|SPAC31G5.17c [details] [associations]
symbol:rps1001 "40S ribosomal protein S10 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000054 "ribosomal
subunit export from nucleus" evidence=ISO] [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] PomBase:SPAC31G5.17c
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181
GO:GO:0022627 GO:GO:0000054 InterPro:IPR005326 Pfam:PF03501
eggNOG:COG5045 HOGENOM:HOG000216624 KO:K02947 PIR:T38634
RefSeq:NP_594018.1 STRING:O14112 PRIDE:O14112
EnsemblFungi:SPAC31G5.17c.1 GeneID:2542561 KEGG:spo:SPAC31G5.17c
OMA:VLIAHDC OrthoDB:EOG43JGFC NextBio:20803612 Uniprot:O14112
Length = 144
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 72/153 (47%), Positives = 97/153 (63%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELDVPNLQVIKTLQSLKSKGWVNEQFA 60
ML+PK+NR I++ LF +GVLVAKKDF+ PKHPE+ VPNLQVIK QSL S+G++ ++
Sbjct: 1 MLIPKENRKAIHQALFSQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYN 60
Query: 61 WRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQRPDGGRGADDR 120
W +Y+ +TN+G+E LR L++P E+VP+T KRQ R T PR RP+ A
Sbjct: 61 WGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVRPT----APR--AGRPEPRERASAD 114
Query: 121 MSYRKGPQGVDKKADVGAGSTEVEFKGYGGFGR 153
YR+ +KK D GA + GGFGR
Sbjct: 115 AGYRRA----EKK-DEGAAPSGFAPSFRGGFGR 142
>POMBASE|SPBP22H7.08 [details] [associations]
symbol:rps1002 "40S ribosomal protein S10 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000054 "ribosomal
subunit export from nucleus" evidence=ISO] [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] PomBase:SPBP22H7.08
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
EMBL:AB004535 GO:GO:0022627 GO:GO:0000054 InterPro:IPR005326
Pfam:PF03501 HOGENOM:HOG000216624 KO:K02947 OMA:HGDIDTK
OrthoDB:EOG43JGFC RefSeq:NP_595605.1 IntAct:O13614 STRING:O13614
PRIDE:O13614 EnsemblFungi:SPBP22H7.08.1 GeneID:3361259
KEGG:spo:SPBP22H7.08 NextBio:20811357 Uniprot:O13614
Length = 147
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 72/154 (46%), Positives = 97/154 (62%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELDVPNLQVIKTLQSLKSKGWVNEQFA 60
ML+PK+NR I++ LF++GVLVAKKDF+ PKHPE+ VPNLQVIK QSL S+G++ ++
Sbjct: 1 MLIPKENRKAIHQALFQQGVLVAKKDFNLPKHPEVGVPNLQVIKACQSLDSRGYLKTRYN 60
Query: 61 WRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQRPDGGRGADDR 120
W +Y+ +TN+G+E LR L++P E+VP+T KRQ R PR P A D
Sbjct: 61 WGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVRPA----APRAGRPEPRERSSAADA 116
Query: 121 MSYRKGPQGVDKKADVGA-GSTEVEFKGYGGFGR 153
YR+ +KK D A G F+G GFGR
Sbjct: 117 -GYRRA----EKKDDGAAPGGFAPSFRG--GFGR 143
>ASPGD|ASPL0000012467 [details] [associations]
symbol:AN3706 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0006407 "rRNA export from
nucleus" evidence=IEA] GO:GO:0005840 EMBL:BN001302
InterPro:IPR005326 Pfam:PF03501 OMA:HGDIDTK
EnsemblFungi:CADANIAT00005021 Uniprot:C8V7K1
Length = 153
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 69/161 (42%), Positives = 101/161 (62%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELDVPNLQVIKTLQSLKSKGWVNEQFA 60
ML+PK++R I+EYLF+EGVLVAKKDF+ PKH ++D NL VIK +QSL S+G+V QF+
Sbjct: 1 MLIPKEDRKKIHEYLFREGVLVAKKDFNLPKHGDIDTKNLYVIKAMQSLNSRGYVKTQFS 60
Query: 61 WRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQRPDGGRGADDR 120
W++YY+ +T +G++ LR L++P E+VP+T +Q R S P P G G ++R
Sbjct: 61 WQYYYYTLTPEGLDYLREWLHLPAEVVPATHIKQQR----SHAP------PRGMMGGEER 110
Query: 121 MSYRKGP-QGVDKKADVGAGSTEVEFKGY--GGFGRGKAPP 158
+ P +G ++ + G EF GG GRG+ P
Sbjct: 111 ERRPRPPREGGYRRREEGKEGAPGEFAPSFRGGIGRGRGAP 151
>DICTYBASE|DDB_G0286117 [details] [associations]
symbol:rps10 "40S ribosomal protein S10"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0000822 "inositol hexakisphosphate
binding" evidence=IDA] [GO:0006412 "translation" evidence=ISS]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0286117
GO:GO:0005615 GenomeReviews:CM000153_GR GO:GO:0006412 GO:GO:0005840
EMBL:AAFI02000085 GO:GO:0000822 InterPro:IPR005326 Pfam:PF03501
eggNOG:COG5045 KO:K02947 EMBL:AF049896 EMBL:AF095643
RefSeq:XP_637859.1 STRING:O77082 PRIDE:O77082
EnsemblProtists:DDB0191166 GeneID:8625456 KEGG:ddi:DDB_G0286117
OMA:IYRYLFQ ProtClustDB:PTZ00034 Uniprot:O77082
Length = 154
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 61/146 (41%), Positives = 94/146 (64%)
Query: 2 LMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELD-VPNLQVIKTLQSLKSKGWVNEQFA 60
L+P +N+ IY YLF+EGVLVA KDFH KHP+++ V NL V++ L+S KS+ +V E F
Sbjct: 3 LIPTENKLAIYRYLFQEGVLVAPKDFHLAKHPQIETVSNLDVLQILRSFKSRKFVTETFN 62
Query: 61 WRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQRPDGGRGADDR 120
W++YYW +T +GI+ LR L +P+ +VP+T+K+QA + ++ + T+R G D
Sbjct: 63 WQYYYWVLTEEGIKYLRTYLQVPESVVPATMKKQA-SRPSTYTRSEETKRT--GASGDFD 119
Query: 121 MSYRKGP--QGVDKKADVGAGSTEVE 144
S+ +G QG D++ +G G E
Sbjct: 120 PSFNRGDRRQGGDRRGGMGRGQYRTE 145
>UNIPROTKB|G4NC88 [details] [associations]
symbol:MGG_01113 "40S ribosomal protein S10-A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS] [GO:0043581
"mycelium development" evidence=IEP] EMBL:CM001235 GO:GO:0006412
GO:GO:0003735 GO:GO:0043581 GO:GO:0022627 InterPro:IPR005326
Pfam:PF03501 KO:K02947 RefSeq:XP_003717821.1
EnsemblFungi:MGG_01113T0 GeneID:2674131 KEGG:mgr:MGG_01113
Uniprot:G4NC88
Length = 170
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 77/174 (44%), Positives = 108/174 (62%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPEL-DVPNLQVIKTLQSLKSKGWVNEQF 59
MLMPK +R I+EYLF+EGVLVA KD++ +HP++ +V NL VIK QSL S+G + +F
Sbjct: 1 MLMPKADRKAIHEYLFREGVLVAAKDYNLAEHPDIPNVKNLFVIKACQSLNSRGLIKTRF 60
Query: 60 AWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMT-------QRPD 112
+W++YY+ +T +G++ LR L++P EIVP+T +Q R+ PR M +RP
Sbjct: 61 SWQYYYYTLTPEGLDYLREWLHLPAEIVPATHIKQQRS---HAPPRGMMGGEGERERRPF 117
Query: 113 G-GRGAD-----DRMS-YRKGPQGVDKKADVGA-GSTEVEFKGYGGFGRGKAPP 158
G GRG D DR YR+ G K+ GA G + +F+G G GRG APP
Sbjct: 118 GRGRGGDRGDRGDREGGYRRRDAGEGKEG--GAPGEFQPQFRGGFGRGRGGAPP 169
>SGD|S000005819 [details] [associations]
symbol:RPS10A "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0006407 "rRNA
export from nucleus" evidence=IGI] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=NAS] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=NAS] [GO:0002181 "cytoplasmic
translation" evidence=NAS] SGD:S000005819 EMBL:BK006948
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003735 GO:GO:0002181
GO:GO:0022627 PDB:3U5C PDB:3U5G PDBsum:3U5C PDBsum:3U5G
GO:GO:0006407 InterPro:IPR005326 Pfam:PF03501 eggNOG:COG5045
HOGENOM:HOG000216624 KO:K02947 GeneTree:ENSGT00440000034918
OrthoDB:EOG43JGFC EMBL:Z75201 PIR:S67197 RefSeq:NP_014936.1
ProteinModelPortal:Q08745 SMR:Q08745 IntAct:Q08745
MINT:MINT-2786873 STRING:Q08745 PaxDb:Q08745 EnsemblFungi:YOR293W
GeneID:854468 KEGG:sce:YOR293W CYGD:YOR293w OMA:CHEGHAV
NextBio:976759 Genevestigator:Q08745 GermOnline:YOR293W
Uniprot:Q08745
Length = 105
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 54/98 (55%), Positives = 74/98 (75%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELDVPNLQVIKTLQSLKSKGWVNEQFA 60
MLMPK++R I++YLF+EGV+VAKKDF+ KH E+D NL VIK LQSL SKG+V QF+
Sbjct: 1 MLMPKEDRNKIHQYLFQEGVVVAKKDFNQAKHEEIDTKNLYVIKALQSLTSKGYVKTQFS 60
Query: 61 WRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTT 98
W++YY+ +T +G+E LR LN+P+ IVP T ++ T
Sbjct: 61 WQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQERNPT 98
>SGD|S000004843 [details] [associations]
symbol:RPS10B "Protein component of the small (40S) ribosomal
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=NAS] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=NAS] [GO:0005840 "ribosome" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=NAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IGI] SGD:S000004843 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:BK006946 GO:GO:0003735 GO:GO:0002181
EMBL:Z49939 GO:GO:0022627 GO:GO:0006407 InterPro:IPR005326
Pfam:PF03501 HOGENOM:HOG000216624 KO:K02947
GeneTree:ENSGT00440000034918 OrthoDB:EOG43JGFC PIR:S57597
RefSeq:NP_013957.1 ProteinModelPortal:P46784 SMR:P46784
IntAct:P46784 MINT:MINT-2788813 STRING:P46784 EnsemblFungi:YMR230W
GeneID:855270 KEGG:sce:YMR230W CYGD:YMR230w OMA:HLFQEGV
NextBio:978882 Genevestigator:P46784 GermOnline:YMR230W
Uniprot:P46784
Length = 105
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 53/90 (58%), Positives = 70/90 (77%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELDVPNLQVIKTLQSLKSKGWVNEQFA 60
MLMPK+ R I++YLF+EGV+VAKKDF+ KH E+D NL VIK LQSL SKG+V QF+
Sbjct: 1 MLMPKQERNKIHQYLFQEGVVVAKKDFNQAKHEEIDTKNLYVIKALQSLTSKGYVKTQFS 60
Query: 61 WRHYYWYITNDGIEKLRGVLNIPDEIVPST 90
W++YY+ +T +G+E LR LN+P+ IVP T
Sbjct: 61 WQYYYYTLTEEGVEYLREYLNLPEHIVPGT 90
>GENEDB_PFALCIPARUM|PF07_0080 [details] [associations]
symbol:PF07_0080 "40S ribosomal protein S10,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] GO:GO:0006412 GO:GO:0003735
EMBL:AL844506 GO:GO:0022627 InterPro:IPR005326 Pfam:PF03501
HOGENOM:HOG000216624 KO:K02947 OMA:HLFQEGV ProtClustDB:PTZ00034
RefSeq:XP_001349098.1 ProteinModelPortal:Q8IBQ5 IntAct:Q8IBQ5
MINT:MINT-1603011 EnsemblProtists:PF07_0080:mRNA GeneID:2655124
KEGG:pfa:PF07_0080 EuPathDB:PlasmoDB:PF3D7_0719700 Uniprot:Q8IBQ5
Length = 137
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 56/124 (45%), Positives = 85/124 (68%)
Query: 3 MPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELDVPNLQVIKTLQSLKSKGWVNEQFAWR 62
+PK+N+ +IYEYLFKEGV+V +KD P+HP L+VPNL ++ TL+SLKS+ +V E++ W+
Sbjct: 14 IPKQNKKLIYEYLFKEGVIVVEKDAKIPRHPHLNVPNLHIMMTLKSLKSRNYVEEKYNWK 73
Query: 63 HYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQ--RPDGGRG-ADD 119
H Y+ + N+GIE LR L++P I P+TL ++ A K+ +++ R GRG A D
Sbjct: 74 HQYFILNNEGIEYLREFLHLPPSIFPATLSKKT-VNRAPKMDEDISRDVRQPMGRGRAFD 132
Query: 120 RMSY 123
R +
Sbjct: 133 RRPF 136
>UNIPROTKB|Q8IBQ5 [details] [associations]
symbol:PF07_0080 "40S ribosomal protein S10, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS] GO:GO:0006412 GO:GO:0003735 EMBL:AL844506
GO:GO:0022627 InterPro:IPR005326 Pfam:PF03501 HOGENOM:HOG000216624
KO:K02947 OMA:HLFQEGV ProtClustDB:PTZ00034 RefSeq:XP_001349098.1
ProteinModelPortal:Q8IBQ5 IntAct:Q8IBQ5 MINT:MINT-1603011
EnsemblProtists:PF07_0080:mRNA GeneID:2655124 KEGG:pfa:PF07_0080
EuPathDB:PlasmoDB:PF3D7_0719700 Uniprot:Q8IBQ5
Length = 137
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 56/124 (45%), Positives = 85/124 (68%)
Query: 3 MPKKNRYIIYEYLFKEGVLVAKKDFHAPKHPELDVPNLQVIKTLQSLKSKGWVNEQFAWR 62
+PK+N+ +IYEYLFKEGV+V +KD P+HP L+VPNL ++ TL+SLKS+ +V E++ W+
Sbjct: 14 IPKQNKKLIYEYLFKEGVIVVEKDAKIPRHPHLNVPNLHIMMTLKSLKSRNYVEEKYNWK 73
Query: 63 HYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQ--RPDGGRG-ADD 119
H Y+ + N+GIE LR L++P I P+TL ++ A K+ +++ R GRG A D
Sbjct: 74 HQYFILNNEGIEYLREFLHLPPSIFPATLSKKT-VNRAPKMDEDISRDVRQPMGRGRAFD 132
Query: 120 RMSY 123
R +
Sbjct: 133 RRPF 136
>UNIPROTKB|F1PHS5 [details] [associations]
symbol:PLEC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0043292 "contractile fiber" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0031581 "hemidesmosome
assembly" evidence=IEA] [GO:0030506 "ankyrin binding" evidence=IEA]
[GO:0030056 "hemidesmosome" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR001101 InterPro:IPR001589 InterPro:IPR001715
Pfam:PF00307 Pfam:PF00681 PROSITE:PS00019 PROSITE:PS00020
PROSITE:PS50021 SMART:SM00033 SMART:SM00250 GO:GO:0005925
GO:GO:0042383 GO:GO:0045111 GO:GO:0043292 Gene3D:1.10.418.10
InterPro:IPR018159 SMART:SM00150 SUPFAM:SSF47576 GO:GO:0030056
GO:GO:0031581 GeneTree:ENSGT00700000104432 OMA:AWRYLYG
InterPro:IPR005326 Pfam:PF03501 EMBL:AAEX03008942 EMBL:AAEX03008943
Ensembl:ENSCAFT00000002240 Uniprot:F1PHS5
Length = 4691
Score = 270 (100.1 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 57/119 (47%), Positives = 79/119 (66%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPK--HPELD-VPNLQVIKTLQSLKSKGWVNE 57
MLMP+ +YE LF+EGV+VAKKD P+ HP + V NLQV++ + SL+++G V E
Sbjct: 5 MLMPRDQLRAVYEVLFREGVMVAKKD-RRPRSLHPHVPGVTNLQVMRAMASLRARGLVRE 63
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTT----DASKVPR-QMTQRP 111
FAWRH+YWY+TN+GI LR L++P EIVP++L+R R A ++P Q Q P
Sbjct: 64 TFAWRHFYWYLTNEGIAHLRQYLHLPPEIVPASLQRVRRPVAMVMPARRIPHVQSVQGP 122
>UNIPROTKB|E1BF59 [details] [associations]
symbol:LOC786966 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0043292 "contractile fiber" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0031581 "hemidesmosome
assembly" evidence=IEA] [GO:0030506 "ankyrin binding" evidence=IEA]
[GO:0030056 "hemidesmosome" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR001101 InterPro:IPR001589 InterPro:IPR001715
Pfam:PF00307 Pfam:PF00681 PROSITE:PS00019 PROSITE:PS00020
PROSITE:PS50021 SMART:SM00033 SMART:SM00250 GO:GO:0005925
GO:GO:0042383 GO:GO:0045111 GO:GO:0043292 Gene3D:1.10.418.10
InterPro:IPR018159 SMART:SM00150 SUPFAM:SSF47576 GO:GO:0030056
GO:GO:0031581 GeneTree:ENSGT00700000104432 OMA:AWRYLYG
InterPro:IPR005326 Pfam:PF03501 EMBL:DAAA02037456 EMBL:DAAA02037457
EMBL:DAAA02037458 EMBL:DAAA02037459 EMBL:DAAA02037460
IPI:IPI00685232 Ensembl:ENSBTAT00000015828 Uniprot:E1BF59
Length = 4644
Score = 264 (98.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 56/119 (47%), Positives = 77/119 (64%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPK--HPELD-VPNLQVIKTLQSLKSKGWVNE 57
M MP IYE LF+EGV+VAKKD P+ HP + V NLQV++ + SL+++G V E
Sbjct: 5 MFMPLDQLRAIYEVLFREGVMVAKKD-RRPRSLHPHVPGVTNLQVMRAMASLRARGLVRE 63
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQRPDGGRG 116
FAWRH+YWY+TN+GI LR L++P EIVP++L+R R A +P + T +G
Sbjct: 64 TFAWRHFYWYLTNEGIAHLRQYLHLPPEIVPASLQRVRRPV-AMVMPARRTPHVQAVQG 121
>UNIPROTKB|Q15149 [details] [associations]
symbol:PLEC "Plectin" species:9606 "Homo sapiens"
[GO:0003779 "actin binding" evidence=IEA] [GO:0042383 "sarcolemma"
evidence=IDA] [GO:0008307 "structural constituent of muscle"
evidence=IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030056 "hemidesmosome" evidence=IDA] [GO:0031581
"hemidesmosome assembly" evidence=IDA;TAS] [GO:0005886 "plasma
membrane" evidence=NAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006921 "cellular
component disassembly involved in execution phase of apoptosis"
evidence=TAS] [GO:0034329 "cell junction assembly" evidence=TAS]
[GO:0030506 "ankyrin binding" evidence=IPI] [GO:0016528
"sarcoplasm" evidence=ISS] [GO:0043034 "costamere" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] Reactome:REACT_578 InterPro:IPR001101
InterPro:IPR001589 InterPro:IPR001715 Pfam:PF00307 Pfam:PF00681
PROSITE:PS00019 PROSITE:PS00020 PROSITE:PS50021 SMART:SM00033
SMART:SM00250 Reactome:REACT_118779 GO:GO:0005829 GO:GO:0005925
GO:GO:0042383 GO:GO:0045111 Reactome:REACT_111155 GO:GO:0043034
eggNOG:COG5069 Gene3D:1.10.418.10 InterPro:IPR018159 SMART:SM00150
SUPFAM:SSF47576 GO:GO:0008307 GO:GO:0006921 GO:GO:0030056
GO:GO:0031581 GO:GO:0016528 EMBL:AC109322 PDB:3F7P PDBsum:3F7P
HOVERGEN:HBG053616 EMBL:Z54367 EMBL:U53204 EMBL:U63610 EMBL:U63609
EMBL:X97053 EMBL:AY480044 EMBL:AY480045 EMBL:AY480046 EMBL:AY480047
EMBL:AY480048 EMBL:AY480049 EMBL:AY480050 EMBL:AY480051
IPI:IPI00014898 IPI:IPI00186711 IPI:IPI00398002 IPI:IPI00398775
IPI:IPI00398776 IPI:IPI00398777 IPI:IPI00398778 IPI:IPI00398779
IPI:IPI00420096 PIR:C59404 PIR:G02520 RefSeq:NP_000436.2
RefSeq:NP_958780.1 RefSeq:NP_958781.1 RefSeq:NP_958782.1
RefSeq:NP_958783.1 RefSeq:NP_958784.1 RefSeq:NP_958785.1
RefSeq:NP_958786.1 UniGene:Hs.434248 PDB:1MB8 PDB:2ODU PDB:2ODV
PDB:3PDY PDB:3PE0 PDBsum:1MB8 PDBsum:2ODU PDBsum:2ODV PDBsum:3PDY
PDBsum:3PE0 ProteinModelPortal:Q15149 SMR:Q15149 IntAct:Q15149
MINT:MINT-257064 STRING:Q15149 PhosphoSite:Q15149 DMDM:209572726
PaxDb:Q15149 PRIDE:Q15149 Ensembl:ENST00000322810
Ensembl:ENST00000345136 Ensembl:ENST00000354589
Ensembl:ENST00000354958 Ensembl:ENST00000356346
Ensembl:ENST00000357649 Ensembl:ENST00000398774
Ensembl:ENST00000436759 Ensembl:ENST00000527096
Ensembl:ENST00000561589 Ensembl:ENST00000561919
Ensembl:ENST00000564962 Ensembl:ENST00000565080
Ensembl:ENST00000565268 Ensembl:ENST00000565557
Ensembl:ENST00000567302 Ensembl:ENST00000568193
Ensembl:ENST00000568204 GeneID:5339 KEGG:hsa:5339 UCSC:uc003zab.1
UCSC:uc003zac.1 UCSC:uc003zad.2 UCSC:uc003zae.1 UCSC:uc003zaf.1
UCSC:uc003zag.1 UCSC:uc003zah.2 UCSC:uc003zaj.2 CTD:5339
GeneCards:GC08M144989 H-InvDB:HIX0168901 HGNC:HGNC:9069
HPA:CAB003847 HPA:HPA025967 HPA:HPA029906 MIM:131950 MIM:226670
MIM:601282 MIM:612138 MIM:613723 neXtProt:NX_Q15149 Orphanet:254361
Orphanet:257 Orphanet:158684 Orphanet:79401 PharmGKB:PA33399
InParanoid:Q15149 KO:K10388 OMA:AWRYLYG BindingDB:Q15149
ChEMBL:CHEMBL1293240 ChiTaRS:PLEC EvolutionaryTrace:Q15149
GenomeRNAi:5339 NextBio:20680 ArrayExpress:Q15149 Bgee:Q15149
CleanEx:HS_PLEC1 Genevestigator:Q15149 GermOnline:ENSG00000178209
InterPro:IPR005326 Pfam:PF03501 Uniprot:Q15149
Length = 4684
Score = 264 (98.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 56/119 (47%), Positives = 78/119 (65%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPK--HPELD-VPNLQVIKTLQSLKSKGWVNE 57
MLMP+ IYE LF+EGV+VAKKD P+ HP + V NLQV++ + SL+++G V E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKD-RRPRSLHPHVPGVTNLQVMRAMASLRARGLVRE 63
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVPRQMTQRPDGGRG 116
FAW H+YWY+TN+GI LR L++P EIVP++L+R R A +P + T +G
Sbjct: 64 TFAWCHFYWYLTNEGIAHLRQYLHLPPEIVPASLQRVRRPV-AMVMPARRTPHVQAVQG 121
>MGI|MGI:1277961 [details] [associations]
symbol:Plec "plectin" species:10090 "Mus musculus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005200 "structural
constituent of cytoskeleton" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007584 "response to
nutrient" evidence=ISO] [GO:0008092 "cytoskeletal protein binding"
evidence=ISO] [GO:0008307 "structural constituent of muscle"
evidence=ISO] [GO:0009925 "basal plasma membrane" evidence=ISO]
[GO:0016324 "apical plasma membrane" evidence=ISO] [GO:0016528
"sarcoplasm" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030056 "hemidesmosome" evidence=ISO] [GO:0030506
"ankyrin binding" evidence=ISO] [GO:0031581 "hemidesmosome
assembly" evidence=ISO] [GO:0042383 "sarcolemma" evidence=ISO]
[GO:0043292 "contractile fiber" evidence=IDA] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO] InterPro:IPR001101 InterPro:IPR001589
InterPro:IPR001715 Pfam:PF00307 Pfam:PF00681 PROSITE:PS00019
PROSITE:PS00020 PROSITE:PS50021 SMART:SM00033 SMART:SM00250
MGI:MGI:1277961 GO:GO:0005856 GO:GO:0042383 GO:GO:0043292
eggNOG:COG5069 Gene3D:1.10.418.10 InterPro:IPR018159 SMART:SM00150
SUPFAM:SSF47576 GO:GO:0030056 GO:GO:0031581
GeneTree:ENSGT00700000104432 HOVERGEN:HBG053616 CTD:5339 KO:K10388
InterPro:IPR005326 Pfam:PF03501 EMBL:AY480033 EMBL:AY480038
EMBL:AY480043 EMBL:AF188006 EMBL:AF188007 EMBL:AF188008
EMBL:AF188009 EMBL:AF188010 EMBL:AF188011 EMBL:AF188012
EMBL:AF188013 EMBL:AF188014 EMBL:AF188015 EMBL:AF188016
EMBL:AF188017 EMBL:AF188018 EMBL:AF188019 EMBL:AF188020
EMBL:AF188021 EMBL:AF188022 EMBL:AF188023 EMBL:AK017743
IPI:IPI00229509 IPI:IPI00400214 IPI:IPI00421267 IPI:IPI00421268
IPI:IPI00421271 IPI:IPI00468273 IPI:IPI00626385 IPI:IPI00944107
IPI:IPI01008141 IPI:IPI01008579 PIR:D59404 RefSeq:NP_001157012.1
RefSeq:NP_001157014.1 RefSeq:NP_001157021.1 RefSeq:NP_001157675.1
RefSeq:NP_035247.2 RefSeq:NP_958791.2 RefSeq:NP_958796.2
UniGene:Mm.234912 PDB:1SH5 PDB:1SH6 PDBsum:1SH5 PDBsum:1SH6
ProteinModelPortal:Q9QXS1 SMR:Q9QXS1 IntAct:Q9QXS1 STRING:Q9QXS1
PhosphoSite:Q9QXS1 PaxDb:Q9QXS1 PRIDE:Q9QXS1
Ensembl:ENSMUST00000165453 Ensembl:ENSMUST00000167754
Ensembl:ENSMUST00000170728 Ensembl:ENSMUST00000170915
Ensembl:ENSMUST00000171634 GeneID:18810 KEGG:mmu:18810
UCSC:uc007wir.2 UCSC:uc007wiw.2 UCSC:uc007wjb.2 UCSC:uc007wjc.2
UCSC:uc007wjd.2 UCSC:uc011zuq.1 InParanoid:Q9QXS1 OrthoDB:EOG4SN1MR
EvolutionaryTrace:Q9QXS1 NextBio:295126 Bgee:Q9QXS1
CleanEx:MM_PLEC1 Genevestigator:Q9QXS1
GermOnline:ENSMUSG00000022565 Uniprot:Q9QXS1
Length = 4691
Score = 263 (97.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 55/107 (51%), Positives = 74/107 (69%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPK--HPELD-VPNLQVIKTLQSLKSKGWVNE 57
MLMP IYE LF+EGV+VAKKD P+ HP + V NLQV++ + SLK++G V E
Sbjct: 5 MLMPLDRLRAIYEVLFREGVMVAKKD-RRPRSLHPHVPGVTNLQVMRAMASLKARGLVRE 63
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQARTTDASKVP 104
FAW H+YWY+TN+GI+ LR L++P EIVP++L+R R A +P
Sbjct: 64 TFAWCHFYWYLTNEGIDHLRQYLHLPPEIVPASLQRVRRPV-AMVIP 109
>RGD|621649 [details] [associations]
symbol:Plec "plectin" species:10116 "Rattus norvegicus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005200 "structural
constituent of cytoskeleton" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005925
"focal adhesion" evidence=ISO] [GO:0007565 "female pregnancy"
evidence=IEP] [GO:0007584 "response to nutrient" evidence=IDA]
[GO:0008092 "cytoskeletal protein binding" evidence=IDA]
[GO:0008307 "structural constituent of muscle" evidence=ISO]
[GO:0009925 "basal plasma membrane" evidence=IDA] [GO:0016324
"apical plasma membrane" evidence=IDA] [GO:0016528 "sarcoplasm"
evidence=IDA] [GO:0030056 "hemidesmosome" evidence=ISO;ISS]
[GO:0030506 "ankyrin binding" evidence=ISO;IPI] [GO:0030855
"epithelial cell differentiation" evidence=IEP] [GO:0031581
"hemidesmosome assembly" evidence=ISO;ISS] [GO:0042383 "sarcolemma"
evidence=ISO;IDA] [GO:0043034 "costamere" evidence=TAS] [GO:0043292
"contractile fiber" evidence=ISO] [GO:0045111 "intermediate
filament cytoskeleton" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=IDA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] InterPro:IPR001101 InterPro:IPR001589
InterPro:IPR001715 Pfam:PF00307 Pfam:PF00681 PROSITE:PS00019
PROSITE:PS00020 PROSITE:PS50021 SMART:SM00033 SMART:SM00250
RGD:621649 GO:GO:0048471 GO:GO:0005856 GO:GO:0008092 GO:GO:0005200
GO:GO:0016324 GO:GO:0007584 GO:GO:0007565 GO:GO:0042383
GO:GO:0043034 eggNOG:COG5069 Gene3D:1.10.418.10 InterPro:IPR018159
SMART:SM00150 SUPFAM:SSF47576 GO:GO:0009925 GO:GO:0030056
GO:GO:0047485 GO:GO:0030855 GO:GO:0031581 GO:GO:0016528
HOVERGEN:HBG053616 InterPro:IPR005326 Pfam:PF03501 EMBL:X59601
EMBL:U96274 EMBL:U96275 EMBL:U96276 IPI:IPI00230793 IPI:IPI00230794
IPI:IPI00400546 IPI:IPI00454444 PIR:A39638 UniGene:Rn.1085
ProteinModelPortal:P30427 SMR:P30427 IntAct:P30427 STRING:P30427
PhosphoSite:P30427 PRIDE:P30427 UCSC:RGD:621649 ArrayExpress:P30427
Genevestigator:P30427 GermOnline:ENSRNOG00000023781 Uniprot:P30427
Length = 4687
Score = 262 (97.3 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 53/99 (53%), Positives = 71/99 (71%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPK--HPELD-VPNLQVIKTLQSLKSKGWVNE 57
MLMP IYE LF+EGV+VAKKD P+ HP + V NLQV++ + SLK++G V E
Sbjct: 5 MLMPLDQLRAIYEVLFREGVMVAKKD-RRPRSLHPHVPGVTNLQVMRAMTSLKARGLVRE 63
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQAR 96
FAW H+YWY+TN+GI+ LR L++P EIVP++L+R R
Sbjct: 64 TFAWCHFYWYLTNEGIDHLRQYLHLPPEIVPASLQRVRR 102
>UNIPROTKB|Q6S3A0 [details] [associations]
symbol:Plec "Plectin" species:10116 "Rattus norvegicus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] InterPro:IPR001101 InterPro:IPR001589
InterPro:IPR001715 Pfam:PF00307 Pfam:PF00681 PROSITE:PS00019
PROSITE:PS00020 PROSITE:PS50021 SMART:SM00033 SMART:SM00250
RGD:621649 GO:GO:0005856 Gene3D:1.10.418.10 InterPro:IPR018159
SMART:SM00150 SUPFAM:SSF47576 HSSP:Q01082 HOVERGEN:HBG053616
InterPro:IPR005326 Pfam:PF03501 UniGene:Rn.1085
HOGENOM:HOG000290167 EMBL:AY480027 IPI:IPI00209000 SMR:Q6S3A0
STRING:Q6S3A0 Ensembl:ENSRNOT00000047323 InParanoid:Q6S3A0
Genevestigator:Q6S3A0 Uniprot:Q6S3A0
Length = 4688
Score = 262 (97.3 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 53/99 (53%), Positives = 71/99 (71%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPK--HPELD-VPNLQVIKTLQSLKSKGWVNE 57
MLMP IYE LF+EGV+VAKKD P+ HP + V NLQV++ + SLK++G V E
Sbjct: 5 MLMPLDQLRAIYEVLFREGVMVAKKD-RRPRSLHPHVPGVTNLQVMRAMTSLKARGLVRE 63
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQAR 96
FAW H+YWY+TN+GI+ LR L++P EIVP++L+R R
Sbjct: 64 TFAWCHFYWYLTNEGIDHLRQYLHLPPEIVPASLQRVRR 102
>UNIPROTKB|D4A323 [details] [associations]
symbol:Plec "Plectin" species:10116 "Rattus norvegicus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] InterPro:IPR001101 InterPro:IPR001589
InterPro:IPR001715 Pfam:PF00307 Pfam:PF00681 PROSITE:PS00019
PROSITE:PS00020 PROSITE:PS50021 SMART:SM00033 SMART:SM00250
RGD:621649 GO:GO:0005925 GO:GO:0042383 GO:GO:0045111 GO:GO:0043292
Gene3D:1.10.418.10 InterPro:IPR018159 SMART:SM00150 SUPFAM:SSF47576
GO:GO:0030056 GO:GO:0031581 InterPro:IPR005326 Pfam:PF03501
IPI:IPI00944227 ProteinModelPortal:D4A323
Ensembl:ENSRNOT00000045149 ArrayExpress:D4A323 Uniprot:D4A323
Length = 4692
Score = 262 (97.3 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 53/99 (53%), Positives = 71/99 (71%)
Query: 1 MLMPKKNRYIIYEYLFKEGVLVAKKDFHAPK--HPELD-VPNLQVIKTLQSLKSKGWVNE 57
MLMP IYE LF+EGV+VAKKD P+ HP + V NLQV++ + SLK++G V E
Sbjct: 5 MLMPLDQLRAIYEVLFREGVMVAKKD-RRPRSLHPHVPGVTNLQVMRAMTSLKARGLVRE 63
Query: 58 QFAWRHYYWYITNDGIEKLRGVLNIPDEIVPSTLKRQAR 96
FAW H+YWY+TN+GI+ LR L++P EIVP++L+R R
Sbjct: 64 TFAWCHFYWYLTNEGIDHLRQYLHLPPEIVPASLQRVRR 102
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.137 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 159 159 0.00091 106 3 11 22 0.41 32
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 561 (60 KB)
Total size of DFA: 150 KB (2092 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.85u 0.12s 15.97t Elapsed: 00:00:01
Total cpu time: 15.86u 0.12s 15.98t Elapsed: 00:00:01
Start: Thu Aug 15 13:59:22 2013 End: Thu Aug 15 13:59:23 2013