BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5982
(102 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242016037|ref|XP_002428645.1| DNA topoisomerase, putative [Pediculus humanus corporis]
gi|212513308|gb|EEB15907.1| DNA topoisomerase, putative [Pediculus humanus corporis]
Length = 961
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 53/66 (80%), Gaps = 4/66 (6%)
Query: 4 KKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYN 59
KKK L RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW YN+ + YN
Sbjct: 882 KKKKQLDRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWCKKYNVPIEKIYN 941
Query: 60 WSGKTK 65
+ + K
Sbjct: 942 KTQRDK 947
>gi|389611807|dbj|BAM19469.1| topoisomerase, partial [Papilio xuthus]
Length = 279
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/49 (87%), Positives = 46/49 (93%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKKTAL RLKEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 198 ADKKKTALERLKEQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 246
>gi|304273979|gb|ADM18427.1| topoisomerase I [Ontholestes murinus]
Length = 241
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D Y
Sbjct: 168 DKKKKQLERLKEQLVKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTHRDK 234
>gi|328723881|ref|XP_001943026.2| PREDICTED: DNA topoisomerase 1-like isoform 1 [Acyrthosiphon pisum]
gi|328723885|ref|XP_003247969.1| PREDICTED: DNA topoisomerase 1-like isoform 3 [Acyrthosiphon pisum]
Length = 747
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K+K AL RLKEQL KLEVQETDKEENKTIALGTSKLNYLDPRISVAW
Sbjct: 667 EKRKKALERLKEQLTKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 714
>gi|328723887|ref|XP_003247970.1| PREDICTED: DNA topoisomerase 1-like isoform 4 [Acyrthosiphon pisum]
Length = 734
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K+K AL RLKEQL KLEVQETDKEENKTIALGTSKLNYLDPRISVAW
Sbjct: 654 EKRKKALERLKEQLTKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 701
>gi|328723883|ref|XP_003247968.1| PREDICTED: DNA topoisomerase 1-like isoform 2 [Acyrthosiphon pisum]
Length = 677
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/48 (89%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K+K AL RLKEQL KLEVQETDKEENKTIALGTSKLNYLDPRISVAW
Sbjct: 597 EKRKKALERLKEQLTKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 644
>gi|381143731|gb|AFF58526.1| topoisomerase I, partial [Bembidion iridescens]
Length = 247
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 55/69 (79%), Gaps = 4/69 (5%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD- 56
+ DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ +
Sbjct: 177 VHDKKKKMLERLKEQLMKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEK 236
Query: 57 FYNWSGKTK 65
YN + + K
Sbjct: 237 IYNKTQRDK 245
>gi|304273999|gb|ADM18437.1| topoisomerase I [Quedius cruentus]
Length = 241
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 46/50 (92%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ DKKK L RLKEQL+KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 166 LFDKKKKMLQRLKEQLVKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 215
>gi|189094063|gb|ACD75859.1| topoisomerase I [Sialis sp. ALW-2008]
Length = 234
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 47/50 (94%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ DKKK AL RL++QL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 177 VHDKKKKALERLRDQLMKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|381143883|gb|AFF58602.1| topoisomerase I, partial [Bembidion trechiforme]
Length = 247
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 55/69 (79%), Gaps = 4/69 (5%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD- 56
+ DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ +
Sbjct: 177 VHDKKKKMLERLKEQLMKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEK 236
Query: 57 FYNWSGKTK 65
YN + + K
Sbjct: 237 IYNKTQRDK 245
>gi|304274009|gb|ADM18442.1| topoisomerase I [Tasgius pedator]
Length = 241
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 4/69 (5%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD- 56
+ DKKK L RL+EQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW Y++ D
Sbjct: 166 LYDKKKKQLERLREQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKYDVPIDK 225
Query: 57 FYNWSGKTK 65
YN + + K
Sbjct: 226 IYNKTQRDK 234
>gi|304273995|gb|ADM18435.1| topoisomerase I [Quediocafus insolitus]
Length = 205
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 52/67 (77%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L R++EQL KLE+QETDK+ENKTIALGTSKLNYLDPRISVAW Y + D Y
Sbjct: 132 DKKKKMLERMREQLAKLEIQETDKDENKTIALGTSKLNYLDPRISVAWCKKYEVPIDKIY 191
Query: 59 NWSGKTK 65
N + + K
Sbjct: 192 NKTQRDK 198
>gi|381143667|gb|AFF58494.1| topoisomerase I, partial [Bembidion concretum]
Length = 244
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLMKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|381143763|gb|AFF58542.1| topoisomerase I, partial [Bembidion melanopodum]
gi|381143831|gb|AFF58576.1| topoisomerase I, partial [Bembidion rugosellum]
Length = 247
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143701|gb|AFF58511.1| topoisomerase I, partial [Bembidion foveolatum]
gi|381143821|gb|AFF58571.1| topoisomerase I, partial [Bembidion opulentum riverinae]
Length = 247
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|378793088|gb|AFC56768.1| topoisomerase I, partial [Nebria gyllenhali]
gi|378793090|gb|AFC56769.1| topoisomerase I, partial [Nebria nivalis]
gi|378793092|gb|AFC56770.1| topoisomerase I, partial [Nebria nivalis]
gi|378793094|gb|AFC56771.1| topoisomerase I, partial [Nebria baicalica]
gi|378793096|gb|AFC56772.1| topoisomerase I, partial [Nebria subdilatata]
gi|378793098|gb|AFC56773.1| topoisomerase I, partial [Nebria gouleti]
gi|378793100|gb|AFC56774.1| topoisomerase I, partial [Nebria gouleti]
Length = 252
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 182 DKKKKTLERLKEQLMKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 229
>gi|304273975|gb|ADM18425.1| topoisomerase I [Ocypus olens]
Length = 241
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RL+EQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW Y++ D Y
Sbjct: 168 DKKKKQLERLREQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKYDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|304273957|gb|ADM18416.1| topoisomerase I [Hadrotes crassus]
Length = 241
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RL+EQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW Y++ D Y
Sbjct: 168 DKKKKQLERLREQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKYDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|189094069|gb|ACD75862.1| topoisomerase I [Laccophilus pictus]
Length = 247
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 55/69 (79%), Gaps = 4/69 (5%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD- 56
+ DKKK +L RLKEQL KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ +
Sbjct: 177 VHDKKKKSLDRLKEQLKKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEK 236
Query: 57 FYNWSGKTK 65
YN + + K
Sbjct: 237 IYNKTQRDK 245
>gi|381143881|gb|AFF58601.1| topoisomerase I, partial [Bembidion transparens]
Length = 272
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 204 DKKKKMLERLKEQLMKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 251
>gi|381143817|gb|AFF58569.1| topoisomerase I, partial [Bembidion recticolle]
Length = 247
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|380714819|gb|AFE02782.1| topoisomerase I, partial [Bembidion coxendix]
Length = 245
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|380714817|gb|AFE02781.1| topoisomerase I, partial [Bembidion confusum]
Length = 246
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|189094101|gb|ACD75878.1| topoisomerase I [Bembidion integrum]
gi|189094103|gb|ACD75879.1| topoisomerase I [Bembidion integrum]
gi|189094113|gb|ACD75884.1| topoisomerase I [Bembidion rufotinctum]
gi|189094115|gb|ACD75885.1| topoisomerase I [Bembidion rufotinctum]
gi|380714831|gb|AFE02788.1| topoisomerase I, partial [Bembidion cheyennense]
Length = 247
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|378793086|gb|AFC56767.1| topoisomerase I, partial [Nebria crassicornis]
Length = 252
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 182 DKKKKTLERLKEQLMKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 229
>gi|381143623|gb|AFF58472.1| topoisomerase I, partial [Bembidion articulatum]
Length = 246
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|189094107|gb|ACD75881.1| topoisomerase I [Bembidion inaequale]
gi|380714815|gb|AFE02780.1| topoisomerase I, partial [Bembidion bowditchii]
gi|381143785|gb|AFF58553.1| topoisomerase I, partial [Bembidion paraenulum]
Length = 247
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|189094099|gb|ACD75877.1| topoisomerase I [Bembidion concolor]
gi|380714813|gb|AFE02779.1| topoisomerase I, partial [Bembidion californicum]
gi|381143775|gb|AFF58548.1| topoisomerase I, partial [Bembidion nigrum]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143607|gb|AFF58464.1| topoisomerase I, partial [Bembidion (Omotaphus) sp. 1 DRM-2012]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143777|gb|AFF58549.1| topoisomerase I, partial [Bembidion niloticum batesi]
Length = 245
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 177 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 236
Query: 59 NWSGKTK 65
N + + K
Sbjct: 237 NKTQRDK 243
>gi|380714835|gb|AFE02790.1| topoisomerase I, partial [Bembidion arenobilis]
Length = 232
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|380714823|gb|AFE02784.1| topoisomerase I, partial [Bembidion lapponicum]
Length = 246
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143741|gb|AFF58531.1| topoisomerase I, partial [Bembidion laterale]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 4/69 (5%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD- 56
+ DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ +
Sbjct: 177 IHDKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEK 236
Query: 57 FYNWSGKTK 65
YN + + K
Sbjct: 237 IYNKTQRDK 245
>gi|380714829|gb|AFE02787.1| topoisomerase I, partial [Bembidion bifossulatum]
Length = 245
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 177 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 236
Query: 59 NWSGKTK 65
N + + K
Sbjct: 237 NKTQRDK 243
>gi|381143837|gb|AFF58579.1| topoisomerase I, partial [Bembidion sciakyi sciakyi]
Length = 226
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 177 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 224
>gi|381143643|gb|AFF58482.1| topoisomerase I, partial [Bembidion carinula]
Length = 246
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 178 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 237
Query: 59 NWSGKTK 65
N + + K
Sbjct: 238 NKTQRDK 244
>gi|381143733|gb|AFF58527.1| topoisomerase I, partial [Bembidion jacksoniense]
Length = 239
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 176 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 223
>gi|381143699|gb|AFF58510.1| topoisomerase I, partial [Bembidion fortestriatum]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|189094083|gb|ACD75869.1| topoisomerase I [Metrius contractus]
Length = 281
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 46/48 (95%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK AL RL++QL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 213 DKKKKALERLRDQLMKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 260
>gi|381143815|gb|AFF58568.1| topoisomerase I, partial [Bembidion rawlinsi]
Length = 241
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|381143619|gb|AFF58470.1| topoisomerase I, partial [Bembidion anthracinum]
Length = 246
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|380714827|gb|AFE02786.1| topoisomerase I, partial [Bembidion americanum]
Length = 227
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 159 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 218
Query: 59 NWSGKTK 65
N + + K
Sbjct: 219 NKTQRDK 225
>gi|380714821|gb|AFE02783.1| topoisomerase I, partial [Bembidion balli]
Length = 245
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|304274007|gb|ADM18441.1| topoisomerase I [Tasgius morsitans]
Length = 241
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RL+EQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW Y++ D Y
Sbjct: 168 DKKKKQLERLREQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKYDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|381143849|gb|AFF58585.1| topoisomerase I, partial [Bembidion semistriatum]
Length = 241
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|381143683|gb|AFF58502.1| topoisomerase I, partial [Bembidion durangoense]
Length = 238
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|381143889|gb|AFF58605.1| topoisomerase I, partial [Bembidion vernale]
Length = 238
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 4/69 (5%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD- 56
+ DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ +
Sbjct: 170 VHDKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEK 229
Query: 57 FYNWSGKTK 65
YN + + K
Sbjct: 230 IYNKTQRDK 238
>gi|381143893|gb|AFF58607.1| topoisomerase I, partial [Bembidion vile]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143839|gb|AFF58580.1| topoisomerase I, partial [Bembidion scintillans]
Length = 245
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 177 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 236
Query: 59 NWSGKTK 65
N + + K
Sbjct: 237 NKTQRDK 243
>gi|381143723|gb|AFF58522.1| topoisomerase I, partial [Bembidion humboldtense]
Length = 260
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 204 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 251
>gi|381143695|gb|AFF58508.1| topoisomerase I, partial [Bembidion festivum]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143635|gb|AFF58478.1| topoisomerase I, partial [Bembidion breve]
Length = 240
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKTLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|380714843|gb|AFE02794.1| topoisomerase I, partial [Bembidion rothfelsi]
Length = 241
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|381143721|gb|AFF58521.1| topoisomerase I, partial [Bembidion horni]
gi|381143771|gb|AFF58546.1| topoisomerase I, partial [Bembidion mundum]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|380714839|gb|AFE02792.1| topoisomerase I, partial [Bembidion honestum]
Length = 239
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|381143625|gb|AFF58473.1| topoisomerase I, partial [Bembidion assimile]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143929|gb|AFF58625.1| topoisomerase I, partial [Sinechostictus elongatus]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 55/69 (79%), Gaps = 4/69 (5%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD- 56
+ DKKK L RLKEQL++LEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ +
Sbjct: 177 IHDKKKKMLERLKEQLIRLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEK 236
Query: 57 FYNWSGKTK 65
YN + + K
Sbjct: 237 IYNKTQRDK 245
>gi|381143851|gb|AFF58586.1| topoisomerase I, partial [Bembidion sexfoveatum]
Length = 260
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 204 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 251
>gi|381143709|gb|AFF58515.1| topoisomerase I, partial [Bembidion geniculatum]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKTLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143713|gb|AFF58517.1| topoisomerase I, partial [Bembidion grandiceps]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143697|gb|AFF58509.1| topoisomerase I, partial [Bembidion flohri]
gi|381143887|gb|AFF58604.1| topoisomerase I, partial [Bembidion varium]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|189094089|gb|ACD75872.1| topoisomerase I [Bembidion transversale]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRHK 245
>gi|381143825|gb|AFF58573.1| topoisomerase I, partial [Bembidion rolandi]
Length = 228
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143649|gb|AFF58485.1| topoisomerase I, partial [Bembidion (Hoquedela) cf. csikii
DRM-2012]
Length = 243
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 178 DKKKKTLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 225
>gi|381143739|gb|AFF58530.1| topoisomerase I, partial [Bembidion laetum]
Length = 246
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 178 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 237
Query: 59 NWSGKTK 65
N + + K
Sbjct: 238 NKTQRDK 244
>gi|381143707|gb|AFF58514.1| topoisomerase I, partial [Bembidion genei illigeri]
Length = 244
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 177 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 236
Query: 59 NWSGKTK 65
N + + K
Sbjct: 237 NKTQRDK 243
>gi|381143621|gb|AFF58471.1| topoisomerase I, partial [Bembidion aratum]
gi|381143681|gb|AFF58501.1| topoisomerase I, partial [Bembidion dorsale]
Length = 247
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|430732231|gb|AGA55516.1| topoisomerase, partial [Carabus concolor]
Length = 205
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK AL RLKEQL++L VQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 155 DKKKKALDRLKEQLVRLNVQETDKDENKSIALGTSKLNYLDPRISVAW 202
>gi|381143799|gb|AFF58560.1| topoisomerase I, partial [Bembidion planum]
Length = 244
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 176 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 235
Query: 59 NWSGKTK 65
N + + K
Sbjct: 236 NKTQRDK 242
>gi|381143687|gb|AFF58504.1| topoisomerase I, partial [Bembidion ephippium]
Length = 244
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|304274003|gb|ADM18439.1| topoisomerase I [Quedius molochinus]
Length = 241
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D Y
Sbjct: 168 DKKKKMLQRLKEQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|381143865|gb|AFF58593.1| topoisomerase I, partial [Bembidion sparsum]
Length = 225
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 164 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 211
>gi|381143663|gb|AFF58492.1| topoisomerase I, partial [Bembidion commotum]
gi|381143743|gb|AFF58532.1| topoisomerase I, partial [Bembidion lenae]
Length = 245
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143705|gb|AFF58513.1| topoisomerase I, partial [Bembidion gebleri turbatum]
Length = 241
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|304274005|gb|ADM18440.1| topoisomerase I [Quedius suturalis]
Length = 241
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D Y
Sbjct: 168 DKKKKMLQRLKEQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|381143651|gb|AFF58486.1| topoisomerase I, partial [Bembidion (Plataphus) cf. curtulatum
DRM-2012]
Length = 238
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|380714841|gb|AFE02793.1| topoisomerase I, partial [Bembidion louisella]
Length = 245
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143841|gb|AFF58581.1| topoisomerase I, partial [Bembidion scitulum]
Length = 247
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|189094109|gb|ACD75882.1| topoisomerase I [Bembidion chalceum]
gi|189094111|gb|ACD75883.1| topoisomerase I [Bembidion chalceum]
Length = 247
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143727|gb|AFF58524.1| topoisomerase I, partial [Bembidion impotens]
Length = 270
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 202 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 261
Query: 59 NWSGKTK 65
N + + K
Sbjct: 262 NKTQRDK 268
>gi|381143693|gb|AFF58507.1| topoisomerase I, partial [Bembidion farrarae]
Length = 263
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 204 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 251
>gi|381143673|gb|AFF58497.1| topoisomerase I, partial [Bembidion contractum]
Length = 236
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 174 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 221
>gi|304273989|gb|ADM18432.1| topoisomerase I [Platydracus cinnamopterus]
Length = 239
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 54/69 (78%), Gaps = 4/69 (5%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD- 56
+ DKKK L RLKEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D
Sbjct: 166 IYDKKKKQLERLKEQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDK 225
Query: 57 FYNWSGKTK 65
YN + + K
Sbjct: 226 IYNKTQRDK 234
>gi|189094073|gb|ACD75864.1| topoisomerase I [Amphizoa lecontei]
Length = 268
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL+KLEVQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 213 DKKKKGLERLKDQLVKLEVQETDKDENKSIALGTSKLNYLDPRISVAW 260
>gi|381143671|gb|AFF58496.1| topoisomerase I, partial [Bembidion constricticolle]
gi|381143675|gb|AFF58498.1| topoisomerase I, partial [Bembidion cupreostriatum]
gi|381143863|gb|AFF58592.1| topoisomerase I, partial [Bembidion (Notaphus) nr. ugartei
DRM-2012]
Length = 247
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143737|gb|AFF58529.1| topoisomerase I, partial [Bembidion kuprianovii]
Length = 245
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|189094093|gb|ACD75874.1| topoisomerase I [Bembidion plagiatum]
gi|381143717|gb|AFF58519.1| topoisomerase I, partial [Bembidion hastii]
gi|381143759|gb|AFF58540.1| topoisomerase I, partial [Bembidion maroccanum]
gi|381143797|gb|AFF58559.1| topoisomerase I, partial [Bembidion planatum]
Length = 247
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143873|gb|AFF58597.1| topoisomerase I, partial [Bembidion tairuense]
Length = 243
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 175 DKKKKTLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 222
>gi|380714833|gb|AFE02789.1| topoisomerase I, partial [Bembidion antiquum]
Length = 245
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143751|gb|AFF58536.1| topoisomerase I, partial [Bembidion lugubre]
gi|381143791|gb|AFF58556.1| topoisomerase I, partial [Bembidion pernotum]
Length = 247
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143835|gb|AFF58578.1| topoisomerase I, partial [Bembidion sarpedon]
Length = 246
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143765|gb|AFF58543.1| topoisomerase I, partial [Bembidion mexicanum]
Length = 246
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143783|gb|AFF58552.1| topoisomerase I, partial [Bembidion octomaculatum]
Length = 247
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|189094095|gb|ACD75875.1| topoisomerase I [Bembidion rapidum]
Length = 247
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLVKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143795|gb|AFF58558.1| topoisomerase I, partial [Bembidion perspicuum]
Length = 241
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 175 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 234
Query: 59 NWSGKTK 65
N + + K
Sbjct: 235 NKTQRDK 241
>gi|304274001|gb|ADM18438.1| topoisomerase I [Quedius picipes]
Length = 241
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D Y
Sbjct: 168 DKKKKMLQRLKEQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|381143769|gb|AFF58545.1| topoisomerase I, partial [Bembidion modestum]
Length = 242
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 174 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 233
Query: 59 NWSGKTK 65
N + + K
Sbjct: 234 NKTQRDK 240
>gi|381143615|gb|AFF58468.1| topoisomerase I, partial [Bembidion affine]
Length = 242
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 174 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 221
>gi|381143931|gb|AFF58626.1| topoisomerase I, partial [Sinechostictus solarii]
Length = 247
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 55/69 (79%), Gaps = 4/69 (5%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD- 56
+ DKKK L RLKEQL++LEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ +
Sbjct: 177 VHDKKKKMLERLKEQLVRLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEK 236
Query: 57 FYNWSGKTK 65
YN + + K
Sbjct: 237 IYNKTQRDK 245
>gi|381143891|gb|AFF58606.1| topoisomerase I, partial [Bembidion versicolor]
Length = 268
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 203 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 250
>gi|381143867|gb|AFF58594.1| topoisomerase I, partial [Bembidion sphaeroderum]
Length = 247
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143789|gb|AFF58555.1| topoisomerase I, partial [Bembidion pedicellatum]
Length = 245
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 177 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 236
Query: 59 NWSGKTK 65
N + + K
Sbjct: 237 NKTQRDK 243
>gi|381143761|gb|AFF58541.1| topoisomerase I, partial [Bembidion mckinleyi carneum]
Length = 232
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 164 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 223
Query: 59 NWSGKTK 65
N + + K
Sbjct: 224 NKTQRDK 230
>gi|381143659|gb|AFF58490.1| topoisomerase I, partial [Bembidion clemens]
gi|381143757|gb|AFF58539.1| topoisomerase I, partial [Bembidion maorinum]
Length = 247
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143813|gb|AFF58567.1| topoisomerase I, partial [Bembidion quadrimaculatum dubitans]
Length = 247
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143715|gb|AFF58518.1| topoisomerase I, partial [Bembidion grapii]
Length = 240
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143631|gb|AFF58476.1| topoisomerase I, partial [Bembidion biguttatum]
Length = 247
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143877|gb|AFF58599.1| topoisomerase I, partial [Bembidion texanum]
Length = 246
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143803|gb|AFF58562.1| topoisomerase I, partial [Bembidion poculare]
Length = 244
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143645|gb|AFF58483.1| topoisomerase I, partial [Bembidion castor]
Length = 230
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143637|gb|AFF58479.1| topoisomerase I, partial [Bembidion decorum subconvexum]
Length = 245
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 177 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 224
>gi|381143603|gb|AFF58462.1| topoisomerase I, partial [Bembidion (Notaphus) sp. 1 DRM-2012]
Length = 239
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 176 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 223
>gi|430732233|gb|AGA55517.1| topoisomerase, partial [Carabus fairmairei]
Length = 205
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK AL RLKEQL++L VQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 155 DKKKKALDRLKEQLVRLNVQETDKDENKSIALGTSKLNYLDPRISVAW 202
>gi|381143897|gb|AFF58609.1| topoisomerase I, partial [Bembidion xanthacrum]
Length = 246
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 178 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 237
Query: 59 NWSGKTK 65
N + + K
Sbjct: 238 NKTQRDK 244
>gi|381143747|gb|AFF58534.1| topoisomerase I, partial [Bembidion liangi]
Length = 245
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143647|gb|AFF58484.1| topoisomerase I, partial [Bembidion (Furcacampa) cf. cognatum
DRM-2012]
Length = 265
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 203 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 250
>gi|381143609|gb|AFF58465.1| topoisomerase I, partial [Bembidion (Zecillenus) sp. 1 DRM-2012]
Length = 271
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 204 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 251
>gi|304273969|gb|ADM18422.1| topoisomerase I [Neobisnius occidentoides]
Length = 239
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RL+EQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D Y
Sbjct: 166 DKKKKMLARLREQLTKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIY 225
Query: 59 NWSGKTK 65
N + + K
Sbjct: 226 NKTQRDK 232
>gi|381143857|gb|AFF58589.1| topoisomerase I, partial [Bembidion solieri]
Length = 245
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 177 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 224
>gi|381143847|gb|AFF58584.1| topoisomerase I, partial [Bembidion semicinctum]
Length = 264
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 203 DKKKKTLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 250
>gi|381143779|gb|AFF58550.1| topoisomerase I, partial [Bembidion nitidum]
Length = 243
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143823|gb|AFF58572.1| topoisomerase I, partial [Bembidion rogersi]
Length = 246
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143807|gb|AFF58564.1| topoisomerase I, partial [Bembidion proprium]
Length = 244
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143595|gb|AFF58458.1| topoisomerase I, partial [Bembidarenas reicheellum]
Length = 243
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 4/65 (6%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L R+K+QL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ D Y
Sbjct: 179 DKKKKQLERMKDQLMKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIDKVY 238
Query: 59 NWSGK 63
N + +
Sbjct: 239 NKTQR 243
>gi|381143801|gb|AFF58561.1| topoisomerase I, partial [Bembidion platynoides]
Length = 242
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143703|gb|AFF58512.1| topoisomerase I, partial [Bembidion frontale]
Length = 262
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 201 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 248
>gi|381143689|gb|AFF58505.1| topoisomerase I, partial [Bembidion errans]
Length = 235
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143661|gb|AFF58491.1| topoisomerase I, partial [Bembidion coloradense]
Length = 235
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 177 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 224
>gi|381143611|gb|AFF58466.1| topoisomerase I, partial [Bembidion actuosum]
Length = 243
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 178 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 225
>gi|189094071|gb|ACD75863.1| topoisomerase I [Copelatus distinctus]
Length = 234
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 46/50 (92%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ DKKK AL RLK+QL KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 177 VHDKKKKALERLKDQLKKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|189094091|gb|ACD75873.1| topoisomerase I [Bembidion umbratum]
Length = 247
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTXRDK 245
>gi|381143843|gb|AFF58582.1| topoisomerase I, partial [Bembidion scopulinum]
Length = 237
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143665|gb|AFF58493.1| topoisomerase I, partial [Bembidion complanulum]
Length = 234
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 175 DKKKKMLERLKEQLMKLEVQETDRDENKXIALGTSKLNYLDPRISVAW 222
>gi|381143773|gb|AFF58547.1| topoisomerase I, partial [Bembidion nigrivestis]
Length = 247
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL++LEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKTLERLKEQLIRLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|378793084|gb|AFC56766.1| topoisomerase I, partial [Nebria brevicollis]
Length = 252
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK +L RLK+QL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 182 DKKKKSLERLKDQLMKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDIPIEKVY 241
Query: 59 NWSGKTK 65
N + + K
Sbjct: 242 NRTQRDK 248
>gi|381143787|gb|AFF58554.1| topoisomerase I, partial [Bembidion parviceps]
Length = 226
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 163 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 210
>gi|189237298|ref|XP_971195.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 936
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 856 DKKKKMLQRLKEQLTKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 903
>gi|270006557|gb|EFA03005.1| hypothetical protein TcasGA2_TC010428 [Tribolium castaneum]
Length = 943
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 863 DKKKKMLQRLKEQLTKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 910
>gi|381143767|gb|AFF58544.1| topoisomerase I, partial [Bembidion mimus]
Length = 234
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 172 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 219
>gi|381143601|gb|AFF58461.1| topoisomerase I, partial [Bembidion (Hypsipezum) sp. 1 DRM-2012]
Length = 246
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143921|gb|AFF58621.1| topoisomerase I, partial [Serranillus sp. DRM-2012]
Length = 220
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 50/60 (83%), Gaps = 4/60 (6%)
Query: 4 KKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYN 59
KKK L R+KEQL+KLEVQETD++ENKTIALGTSKLNYLDPRISVAW YN+ + YN
Sbjct: 159 KKKKMLERMKEQLVKLEVQETDRDENKTIALGTSKLNYLDPRISVAWCKKYNVPIEKIYN 218
>gi|380714837|gb|AFE02791.1| topoisomerase I, partial [Bembidion bellorum]
Length = 243
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKXIALGTSKLNYLDPRISVAW 226
>gi|381143927|gb|AFF58624.1| topoisomerase I, partial [Sinechostictus dahli]
Length = 247
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 46/50 (92%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ DKKK L RLKEQL++LEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 177 VHDKKKKMLERLKEQLVRLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|381143845|gb|AFF58583.1| topoisomerase I, partial [Bembidion sejunctum semiaureum]
Length = 245
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLVKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|304274015|gb|ADM18445.1| topoisomerase I [Velleius dilatatus]
Length = 241
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 55/69 (79%), Gaps = 4/69 (5%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD- 56
+ DKKK L RLK+QL+KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D
Sbjct: 166 LFDKKKKMLQRLKDQLVKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDK 225
Query: 57 FYNWSGKTK 65
YN + + K
Sbjct: 226 IYNKTQRDK 234
>gi|430732229|gb|AGA55515.1| topoisomerase, partial [Carabus irregularis]
Length = 205
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 46/48 (95%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKK+ AL +LK+QL+KLEVQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 155 DKKRKALDKLKDQLVKLEVQETDKDENKSIALGTSKLNYLDPRISVAW 202
>gi|430732221|gb|AGA55511.1| topoisomerase, partial [Carabus deyrollei]
Length = 205
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK AL RLK+QL+KL VQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 155 DKKKKALDRLKDQLVKLNVQETDKDENKSIALGTSKLNYLDPRISVAW 202
>gi|381143793|gb|AFF58557.1| topoisomerase I, partial [Bembidion persimile]
Length = 241
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RL+EQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLREQLIKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|378793108|gb|AFC56778.1| topoisomerase I, partial [Nebria lacustris]
Length = 231
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 182 DKKKKTLERLKDQLMKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 229
>gi|304273955|gb|ADM18415.1| topoisomerase I [Hadropinus fossor]
Length = 241
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RL+EQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D Y
Sbjct: 168 DKKKKQLERLREQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|189094081|gb|ACD75868.1| topoisomerase I [Scaphinotus petersi]
Length = 247
Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLK+QL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKTLERLKDQLMKLEVQETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKAQRDK 245
>gi|381143819|gb|AFF58570.1| topoisomerase I, partial [Bembidion ripicola]
Length = 245
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L R+KEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERMKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|343175107|gb|AEM00018.1| topoisomerase 1B [Spodoptera exigua]
Length = 930
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 45/49 (91%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK AL RL+EQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 849 CDKKKKALERLREQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 897
>gi|381143627|gb|AFF58474.1| topoisomerase I, partial [Bembidion astrabadense]
Length = 244
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RL+EQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 178 DKKKKMLERLREQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 237
Query: 59 NWSGKTK 65
N + + K
Sbjct: 238 NKTQRDK 244
>gi|378793102|gb|AFC56775.1| topoisomerase I, partial [Nebria hudsonica]
gi|378793104|gb|AFC56776.1| topoisomerase I, partial [Nebria lacustris]
gi|378793106|gb|AFC56777.1| topoisomerase I, partial [Nebria lacustris]
gi|378793110|gb|AFC56779.1| topoisomerase I, partial [Nebria lacustris]
gi|378793112|gb|AFC56780.1| topoisomerase I, partial [Nebria lacustris]
gi|378793114|gb|AFC56781.1| topoisomerase I, partial [Nebria lacustris]
gi|378793116|gb|AFC56782.1| topoisomerase I, partial [Nebria lacustris]
gi|378793118|gb|AFC56783.1| topoisomerase I, partial [Nebria lacustris]
gi|378793120|gb|AFC56784.1| topoisomerase I, partial [Nebria lacustris]
gi|378793122|gb|AFC56785.1| topoisomerase I, partial [Nebria lacustris]
gi|378793124|gb|AFC56786.1| topoisomerase I, partial [Nebria lacustris]
gi|378793126|gb|AFC56787.1| topoisomerase I, partial [Nebria lacustris]
gi|378793128|gb|AFC56788.1| topoisomerase I, partial [Nebria bellorum]
gi|378793130|gb|AFC56789.1| topoisomerase I, partial [Nebria bellorum]
gi|378793132|gb|AFC56790.1| topoisomerase I, partial [Nebria bellorum]
Length = 252
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 182 DKKKKTLERLKDQLMKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 229
>gi|381143679|gb|AFF58500.1| topoisomerase I, partial [Bembidion connivens]
Length = 247
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RL+EQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLREQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|304274011|gb|ADM18443.1| topoisomerase I [Thinopinus pictus]
Length = 241
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RL+EQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D Y
Sbjct: 168 DKKKKQLERLREQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|304273919|gb|ADM18397.1| topoisomerase I [Acylophorus sp. SC-2010]
Length = 241
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 54/69 (78%), Gaps = 4/69 (5%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD- 56
+ DKKK L R+KEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D
Sbjct: 166 IYDKKKKQLERMKEQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDK 225
Query: 57 FYNWSGKTK 65
YN + + K
Sbjct: 226 IYNKTQRDK 234
>gi|381143925|gb|AFF58623.1| topoisomerase I, partial [Sinechostictus alesmetana]
Length = 247
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L R+KEQL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKLLERMKEQLVKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|304273983|gb|ADM18429.1| topoisomerase I [Paederus sp. SC-2010]
Length = 241
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 168 DKKKKMLERLKEQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 215
>gi|304273985|gb|ADM18430.1| topoisomerase I [Philonthus splendens]
Length = 241
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RL+EQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D Y
Sbjct: 168 DKKKKMLERLREQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|381143669|gb|AFF58495.1| topoisomerase I, partial [Bembidion connivens]
Length = 269
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RL+EQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 204 DKKKKMLERLREQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 251
>gi|304273947|gb|ADM18411.1| topoisomerase I [Dinothenarus saphyrinus]
Length = 241
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RL+EQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 169 DKKKKQLERLREQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 216
>gi|381143781|gb|AFF58551.1| topoisomerase I, partial [Bembidion obtusum]
Length = 245
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 177 DKKKKMLERLKDQLMKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 224
>gi|357604317|gb|EHJ64132.1| hypothetical protein KGM_04878 [Danaus plexippus]
Length = 873
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 45/49 (91%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK AL RLKEQL KLE+QETD++ENKTIALGTSKLNYLDPRISV+W
Sbjct: 792 CDKKKKALERLKEQLKKLELQETDRDENKTIALGTSKLNYLDPRISVSW 840
>gi|304273945|gb|ADM18410.1| topoisomerase I [Cafius seminitens]
Length = 238
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RL+EQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D Y
Sbjct: 168 DKKKKMLERLREQLTKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|304273981|gb|ADM18428.1| topoisomerase I [Othius punctulatus]
Length = 241
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 168 DKKKKMLERLKDQLCKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 215
>gi|381143735|gb|AFF58528.1| topoisomerase I, partial [Bembidion mimekara]
Length = 247
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLK+QL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKDQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143653|gb|AFF58487.1| topoisomerase I, partial [Bembidion (Philochtemphanes) cf.
exquisitum DRM-2012]
Length = 228
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKDQLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|304273937|gb|ADM18406.1| topoisomerase I [Atanygnathus sp. SC-2010]
Length = 241
Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL KLE+QETDK+ENKTIALGTSKLNYLDPRI+VAW
Sbjct: 168 DKKKRMLDRLKEQLNKLEIQETDKDENKTIALGTSKLNYLDPRITVAW 215
>gi|304273939|gb|ADM18407.1| topoisomerase I [Atrecus punctiventris]
Length = 200
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L R++EQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 149 DKKKKMLERMREQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 196
>gi|381143869|gb|AFF58595.1| topoisomerase I, partial [Bembidion spinolai]
Length = 244
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 176 DKKKKTLERLKEQLMKLEVMETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 235
Query: 59 NWSGKTK 65
N + + K
Sbjct: 236 NKTQRDK 242
>gi|381143905|gb|AFF58613.1| topoisomerase I, partial [Bembidion disjunctum]
gi|381143907|gb|AFF58614.1| topoisomerase I, partial [Bembidion erasum]
Length = 247
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKDQLVKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143909|gb|AFF58615.1| topoisomerase I, partial [Bembidion osculans]
Length = 247
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKDQLVKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143923|gb|AFF58622.1| topoisomerase I, partial [Sinechostictus (Pseudolimnaeum) sp. 3
DRM-2012]
Length = 247
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L R+KEQL++LEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKLLERMKEQLVRLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|381143641|gb|AFF58481.1| topoisomerase I, partial [Bembidion caoduroi]
Length = 247
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLMKLEVMETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|381143719|gb|AFF58520.1| topoisomerase I, partial [Bembidion hirtipes]
Length = 245
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLMKLEVMETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|381143809|gb|AFF58565.1| topoisomerase I, partial [Bembidion pseudocautum]
Length = 247
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLMKLEVMETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|304273931|gb|ADM18403.1| topoisomerase I [Arrowinus relictus]
Length = 238
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 168 DKKKKMLERLKDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 215
>gi|381143833|gb|AFF58577.1| topoisomerase I, partial [Bembidion salinarium]
Length = 245
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLMKLEVMETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143655|gb|AFF58488.1| topoisomerase I, partial [Bembidion (Andrewesa) cf. incisum
DRM-2012]
Length = 242
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLMKLEVMETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|381143903|gb|AFF58612.1| topoisomerase I, partial [Bembidion castum]
Length = 246
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKDQLVKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|189094075|gb|ACD75865.1| topoisomerase I [Dineutus sublineatus]
Length = 234
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 46/50 (92%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ DKKK L RL++QL++LEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 177 VADKKKKQLDRLRDQLVRLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|381143875|gb|AFF58598.1| topoisomerase I, partial [Bembidion tetracolum]
Length = 247
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRI VAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRIXVAW 226
>gi|381143639|gb|AFF58480.1| topoisomerase I, partial [Bembidion canadianum]
Length = 242
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRI VAW
Sbjct: 176 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRIXVAW 223
>gi|189094097|gb|ACD75876.1| topoisomerase I [Bembidion mandibulare]
Length = 247
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEV ETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKTLERLKEQLMKLEVMETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143629|gb|AFF58475.1| topoisomerase I, partial [Bembidion basicorne]
Length = 237
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRI VAW
Sbjct: 177 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRIXVAW 224
>gi|304274013|gb|ADM18444.1| topoisomerase I [Tympanophorus sp. SC-2010]
Length = 241
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D Y
Sbjct: 168 DKKKKMLERLRDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|381143755|gb|AFF58538.1| topoisomerase I, partial [Bembidion luridicorne]
Length = 243
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEV ETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKTLERLKEQLMKLEVMETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143685|gb|AFF58503.1| topoisomerase I, partial [Bembidion dyschirinum]
gi|381143805|gb|AFF58563.1| topoisomerase I, partial [Bembidion properans]
Length = 246
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEV ETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLMKLEVMETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143861|gb|AFF58591.1| topoisomerase I, partial [Bembidion (Nothonepha) nr. lonae
DRM-2012]
Length = 239
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 175 DKKKKMLERLKEQLIKLEVMETDRDENKSIALGTSKLNYLDPRISVAW 222
>gi|381143749|gb|AFF58535.1| topoisomerase I, partial [Bembidion lonae]
Length = 236
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 171 DKKKKMLERLKEQLIKLEVMETDRDENKSIALGTSKLNYLDPRISVAW 218
>gi|381143753|gb|AFF58537.1| topoisomerase I, partial [Bembidion lunulatum]
Length = 243
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 175 DKKKKMXERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 222
>gi|304273967|gb|ADM18421.1| topoisomerase I [Nausicotus spectabilis]
Length = 241
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D Y
Sbjct: 168 DKKKKQLERLRDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|381143691|gb|AFF58506.1| topoisomerase I, partial [Bembidion escherichi]
Length = 246
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK+IALGTSKLNYLDP ISVAW
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKSIALGTSKLNYLDPXISVAW 226
>gi|381143895|gb|AFF58608.1| topoisomerase I, partial [Bembidion wickhami]
Length = 247
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK +L RLKEQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKSLERLKEQLIKLEVLETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|304273963|gb|ADM18419.1| topoisomerase I [Indoquedius sp. SC-2010]
Length = 241
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D Y
Sbjct: 168 DKKKKQLERLRDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|381143933|gb|AFF58627.1| topoisomerase I, partial [Sloaneana lamingtonensis]
Length = 247
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL++LEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKDQLVRLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|328786781|ref|XP_396203.4| PREDICTED: DNA topoisomerase 1 isoform 2 [Apis mellifera]
Length = 1026
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KKK AL RLKEQL KLEVQ TDKEENK IALGTSKLNYLDPRI+VAW
Sbjct: 946 EKKKKALDRLKEQLTKLEVQATDKEENKEIALGTSKLNYLDPRITVAW 993
>gi|381143745|gb|AFF58533.1| topoisomerase I, partial [Bembidion levigatum]
Length = 247
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEV ETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVMETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143855|gb|AFF58588.1| topoisomerase I, partial [Bembidion siticum]
Length = 244
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK ALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 177 DKKKKMLERLKEQLIKLEVQETDRDENKAXALGTSKLNYLDPRISVAWCKKYDVPIEKIY 236
Query: 59 NWSGKTK 65
N + + K
Sbjct: 237 NKTQRDK 243
>gi|381143585|gb|AFF58453.1| topoisomerase I, partial [Amerizus wingatei]
Length = 238
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RL++QL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 178 DKKKKMLERLRDQLVKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 225
>gi|328786783|ref|XP_003250839.1| PREDICTED: DNA topoisomerase 1 isoform 1 [Apis mellifera]
Length = 1022
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KKK AL RLKEQL KLEVQ TDKEENK IALGTSKLNYLDPRI+VAW
Sbjct: 942 EKKKKALDRLKEQLTKLEVQATDKEENKEIALGTSKLNYLDPRITVAW 989
>gi|381143583|gb|AFF58452.1| topoisomerase I, partial [Amerizus spectabilis]
Length = 245
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RL++QL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 178 DKKKKMLERLRDQLVKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 225
>gi|381143885|gb|AFF58603.1| topoisomerase I, partial [Bembidion variegatum]
Length = 246
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEV ETD++ENK IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVMETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|304273933|gb|ADM18404.1| topoisomerase I [Astenus sp. SC-2010]
Length = 241
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 45/48 (93%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KKK L RL+EQL+KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 168 EKKKKMLERLREQLVKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 215
>gi|381143599|gb|AFF58460.1| topoisomerase I, partial [Bembidion (Hoquedela) sp. 1 DRM-2012]
Length = 205
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDP ISVAW
Sbjct: 156 DKKKKTLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPXISVAW 203
>gi|156543660|ref|XP_001605104.1| PREDICTED: DNA topoisomerase 1-like [Nasonia vitripennis]
Length = 1019
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +KKK L RLKEQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 937 LYEKKKKQLDRLKEQLMKLEVQATDREENKEIALGTSKLNYLDPRISVAW 986
>gi|380027021|ref|XP_003697235.1| PREDICTED: DNA topoisomerase 1-like [Apis florea]
Length = 1024
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KKK AL RLKEQL KLEVQ TDKEENK IALGTSKLNYLDPRI+VAW
Sbjct: 944 EKKKKALDRLKEQLTKLEVQATDKEENKEIALGTSKLNYLDPRITVAW 991
>gi|381143827|gb|AFF58574.1| topoisomerase I, partial [Bembidion ruficolle]
Length = 228
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/48 (85%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQLLKLEV ETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKMLERLKEQLLKLEVLETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143657|gb|AFF58489.1| topoisomerase I, partial [Bembidion chilense]
Length = 247
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKTLERLKEQLMKLEVLETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|381143859|gb|AFF58590.1| topoisomerase I, partial [Bembidion (Antiperyphanes) nr. chilense
DRM-2012]
Length = 244
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKTLERLKEQLMKLEVLETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|304273965|gb|ADM18420.1| topoisomerase I [Naddia sp. SC-2010]
Length = 241
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLK+QL KLE+QETD++ENKTI+LGTSKLNYLDPRISVAW +++ D Y
Sbjct: 168 DKKKKMLERLKDQLAKLEIQETDRDENKTISLGTSKLNYLDPRISVAWCKKFDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|304273941|gb|ADM18408.1| topoisomerase I [Belonuchus mimeticus]
Length = 241
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 45/50 (90%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ DKKK L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 166 IYDKKKKMLERLRDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 215
>gi|304273973|gb|ADM18424.1| topoisomerase I [Nudobius pugetanus]
Length = 239
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 168 DKKKKQLERLRDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 215
>gi|381143879|gb|AFF58600.1| topoisomerase I, partial [Bembidion tigrinum]
Length = 246
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDP ISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPXISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143729|gb|AFF58525.1| topoisomerase I, partial [Bembidion interventor]
Length = 235
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEV ETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 167 DKKKKMLERLKEQLIKLEVMETDRDENKAIALGTSKLNYLDPRISVAW 214
>gi|381143617|gb|AFF58469.1| topoisomerase I, partial [Bembidion anchonoderum]
Length = 202
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDP ISVAW
Sbjct: 154 DKKKKMLERLKEQLIKLEVQETDRDENKAIALGTSKLNYLDPXISVAW 201
>gi|189094105|gb|ACD75880.1| topoisomerase I [Bembidion inaequale]
Length = 247
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVLETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|380714825|gb|AFE02785.1| topoisomerase I, partial [Bembidion levettei]
Length = 246
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVLETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|381143613|gb|AFF58467.1| topoisomerase I, partial [Bembidion aenulum]
Length = 247
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLKEQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKMLERLKEQLIKLEVLETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|304273935|gb|ADM18405.1| topoisomerase I [Atanygnathus acuminatus]
Length = 241
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 53/69 (76%), Gaps = 4/69 (5%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD- 56
+ +KKK L RLK+QL KLE+QETDK+ENKTIALGTSKLNYLDPRISVAW Y + D
Sbjct: 166 LYEKKKKMLERLKDQLNKLEIQETDKDENKTIALGTSKLNYLDPRISVAWCKKYGVPIDK 225
Query: 57 FYNWSGKTK 65
YN + + K
Sbjct: 226 IYNKTQRDK 234
>gi|304273929|gb|ADM18402.1| topoisomerase I [Tolmerinus sp. SC-2010]
Length = 241
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L R+++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 168 DKKKKQLERMRDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 215
>gi|381143677|gb|AFF58499.1| topoisomerase I, partial [Bembidion dentellum]
Length = 271
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 204 DKKKKTLERLKDQLMKLEVMETDRDENKSIALGTSKLNYLDPRISVAW 251
>gi|304273993|gb|ADM18434.1| topoisomerase I [Platyprosopus sp. SC-2010]
Length = 241
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
D+KK L RLK+QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 168 DRKKKMLERLKDQLSKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 215
>gi|381143829|gb|AFF58575.1| topoisomerase I, partial [Bembidion rufoplagiatum]
Length = 241
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEV ETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 179 DKKKKTLERLKEQLMKLEVLETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|157167753|ref|XP_001655613.1| DNA topoisomerase type I [Aedes aegypti]
gi|108882028|gb|EAT46253.1| AAEL002551-PA [Aedes aegypti]
Length = 966
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKK+ L RL+EQL KLE+QETDK+ENKTIALGTSKLNYLDPRISVAW
Sbjct: 886 DKKQKQLERLREQLNKLELQETDKDENKTIALGTSKLNYLDPRISVAW 933
>gi|189094067|gb|ACD75861.1| topoisomerase I [Chauliognathus opacus]
Length = 247
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L RLKEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 179 EKKRKLLERLKEQLTKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 226
>gi|347971189|ref|XP_309629.5| AGAP004078-PA [Anopheles gambiae str. PEST]
gi|333466628|gb|EAA05377.5| AGAP004078-PA [Anopheles gambiae str. PEST]
Length = 1088
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKK L RLKEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 1008 DKKSKQLERLKEQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 1055
>gi|381143605|gb|AFF58463.1| topoisomerase I, partial [Bembidion (Nothocys) sp. 1 DRM-2012]
Length = 241
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 177 DKKKKTLERLKDQLMKLEVLETDRDENKSIALGTSKLNYLDPRISVAW 224
>gi|381143725|gb|AFF58523.1| topoisomerase I, partial [Bembidion immaturum]
Length = 247
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RLK+QL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW Y++ + Y
Sbjct: 179 DKKKKTLERLKDQLMKLEVLETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIY 238
Query: 59 NWSGKTK 65
N + + K
Sbjct: 239 NKTQRDK 245
>gi|307182085|gb|EFN69463.1| DNA topoisomerase 1 [Camponotus floridanus]
Length = 1038
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 42/48 (87%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KKK L RLKEQL KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 958 EKKKKQLERLKEQLTKLEVQATDREENKEIALGTSKLNYLDPRISVAW 1005
>gi|189094065|gb|ACD75860.1| topoisomerase I [Prolixocupes lobiceps]
Length = 229
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RL+EQL+KLEV ETD++ENK+IALGTSKLNYLDPRI+VAW
Sbjct: 161 DKKKKHLERLREQLVKLEVAETDRDENKSIALGTSKLNYLDPRITVAW 208
>gi|304273997|gb|ADM18436.1| topoisomerase I [Quedius antipodus]
Length = 241
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/61 (68%), Positives = 49/61 (80%), Gaps = 4/61 (6%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKT 64
L RL+EQL KLE+QETDK+ENKTIALGTSKLNYLDPRISVAW Y++ D YN + +
Sbjct: 174 LDRLREQLAKLEIQETDKDENKTIALGTSKLNYLDPRISVAWCKKYDVPIDKIYNKTQRD 233
Query: 65 K 65
K
Sbjct: 234 K 234
>gi|348519252|ref|XP_003447145.1| PREDICTED: DNA topoisomerase 1-like [Oreochromis niloticus]
Length = 713
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ ++KK A+ R +EQLLKLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 631 LVERKKAAVKRCEEQLLKLEVQATDREENKQIALGTSKLNYLDPRISVAW 680
>gi|347971191|ref|XP_003436707.1| AGAP004078-PB [Anopheles gambiae str. PEST]
gi|333466629|gb|EGK96321.1| AGAP004078-PB [Anopheles gambiae str. PEST]
Length = 581
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKK L RLKEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 501 DKKSKQLERLKEQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 548
>gi|307205971|gb|EFN84097.1| DNA topoisomerase 1 [Harpegnathos saltator]
Length = 1033
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 42/48 (87%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KKK L RLKEQL KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 953 EKKKKQLERLKEQLTKLEVQATDREENKEIALGTSKLNYLDPRISVAW 1000
>gi|304273923|gb|ADM18399.1| topoisomerase I [Amblyopinus emarginatus]
Length = 241
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 49/61 (80%), Gaps = 4/61 (6%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKT 64
L R++EQL KLE+QETDK+ENKTIALGTSKLNYLDPRISVAW Y++ D YN + +
Sbjct: 174 LDRMREQLAKLEIQETDKDENKTIALGTSKLNYLDPRISVAWCKKYDVPIDKIYNKTQRD 233
Query: 65 K 65
K
Sbjct: 234 K 234
>gi|170035478|ref|XP_001845596.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877508|gb|EDS40891.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 962
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 44/48 (91%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKK+ L RLK+QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 882 DKKQKQLERLKDQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 929
>gi|291226061|ref|XP_002733015.1| PREDICTED: DNA topoisomerase I-like [Saccoglossus kowalevskii]
Length = 843
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++KK L RL+EQL+KLEVQ TDKEENK IALGTSKLNYLDPRISVAW
Sbjct: 763 ERKKKQLERLEEQLMKLEVQATDKEENKDIALGTSKLNYLDPRISVAW 810
>gi|304273987|gb|ADM18431.1| topoisomerase I [Hesperopalpus sp. SC-2010]
Length = 241
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L R ++QL KLE+QETD++ENKTI+LGTSKLNYLDPRISVAW +++ D Y
Sbjct: 168 DKKKKLLERFRDQLAKLEIQETDRDENKTISLGTSKLNYLDPRISVAWCKKFDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|432102732|gb|ELK30211.1| DNA topoisomerase 1 [Myotis davidii]
Length = 751
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 669 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 718
>gi|417404462|gb|JAA48983.1| Putative dna topoisomerase i [Desmodus rotundus]
Length = 766
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 684 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 733
>gi|194763437|ref|XP_001963839.1| GF21232 [Drosophila ananassae]
gi|190618764|gb|EDV34288.1| GF21232 [Drosophila ananassae]
Length = 990
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/50 (80%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ DKK L RLKEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 908 LADKKGKQLERLKEQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 957
>gi|198470017|ref|XP_002134477.1| GA24044 [Drosophila pseudoobscura pseudoobscura]
gi|198147142|gb|EDY73104.1| GA24044 [Drosophila pseudoobscura pseudoobscura]
Length = 1054
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 43/49 (87%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKK L RLK+QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 973 ADKKGKQLERLKDQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 1021
>gi|431894391|gb|ELK04191.1| DNA topoisomerase 1 [Pteropus alecto]
Length = 749
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 667 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 716
>gi|345325267|ref|XP_001509816.2| PREDICTED: DNA topoisomerase 1 [Ornithorhynchus anatinus]
Length = 794
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 712 VVETKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 761
>gi|147900774|ref|NP_001084031.1| DNA topoisomerase 1 [Xenopus laevis]
gi|1174739|sp|P41512.1|TOP1_XENLA RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I
gi|214834|gb|AAB36608.1| DNA topoisomerase I [Xenopus laevis]
Length = 829
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ R++EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 739 LVESKKKAVQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 788
>gi|395505408|ref|XP_003757034.1| PREDICTED: DNA topoisomerase 1 [Sarcophilus harrisii]
Length = 1055
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 973 VVETKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 1022
>gi|410953858|ref|XP_003983587.1| PREDICTED: DNA topoisomerase 1 [Felis catus]
Length = 1370
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 1288 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 1337
>gi|350404638|ref|XP_003487171.1| PREDICTED: DNA topoisomerase 1-like [Bombus impatiens]
Length = 1028
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/43 (88%), Positives = 39/43 (90%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
AL RLKEQL KLEVQ TDKEENK IALGTSKLNYLDPRI+VAW
Sbjct: 953 ALDRLKEQLTKLEVQATDKEENKEIALGTSKLNYLDPRITVAW 995
>gi|74183500|dbj|BAE36613.1| unnamed protein product [Mus musculus]
Length = 144
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 62 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 111
>gi|47221872|emb|CAF98884.1| unnamed protein product [Tetraodon nigroviridis]
Length = 622
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 4 KKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK A+ R +EQLLKLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 543 RKKMAVKRCEEQLLKLEVQATDREENKQIALGTSKLNYLDPRISVAW 589
>gi|301606601|ref|XP_002932918.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Xenopus
(Silurana) tropicalis]
Length = 850
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ R++EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 729 LVESKKKAVQRVEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 778
>gi|304273991|gb|ADM18433.1| topoisomerase I [Platydracus sp. SC-2010]
Length = 241
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 4/61 (6%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKT 64
L R+KEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D YN + +
Sbjct: 174 LQRMKEQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIYNKTQRD 233
Query: 65 K 65
K
Sbjct: 234 K 234
>gi|12654247|gb|AAH00943.1| Unknown (protein for IMAGE:3448011), partial [Homo sapiens]
Length = 176
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 94 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 143
>gi|41056366|emb|CAA34500.2| topoisomerase I [Homo sapiens]
Length = 225
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 143 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 192
>gi|348510309|ref|XP_003442688.1| PREDICTED: DNA topoisomerase 1-like [Oreochromis niloticus]
Length = 754
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 42/46 (91%)
Query: 5 KKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
KK A+ R++EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 676 KKKAVQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 721
>gi|426242035|ref|XP_004014884.1| PREDICTED: DNA topoisomerase 1 [Ovis aries]
Length = 851
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 769 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 818
>gi|223460080|gb|AAI36298.1| Topoisomerase (DNA) I [Homo sapiens]
Length = 765
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 683 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 732
>gi|473581|gb|AAB60379.1| DNA topoisomerase I, partial [Homo sapiens]
Length = 761
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 679 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 728
>gi|388452708|ref|NP_001253441.1| DNA topoisomerase 1 [Macaca mulatta]
gi|380816072|gb|AFE79910.1| DNA topoisomerase 1 [Macaca mulatta]
gi|383421209|gb|AFH33818.1| DNA topoisomerase 1 [Macaca mulatta]
gi|384949142|gb|AFI38176.1| DNA topoisomerase 1 [Macaca mulatta]
Length = 767
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>gi|345842372|ref|NP_001230963.1| DNA topoisomerase 1 [Cricetulus griseus]
gi|586107|sp|Q07050.1|TOP1_CRIGR RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I
gi|297077|emb|CAA79747.1| DNA topoisomerase I [Cricetulus griseus]
Length = 767
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>gi|339806|gb|AAA61207.1| topoisomerase I [Homo sapiens]
Length = 765
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 683 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 732
>gi|403290675|ref|XP_003936435.1| PREDICTED: DNA topoisomerase 1 [Saimiri boliviensis boliviensis]
Length = 767
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>gi|387539764|gb|AFJ70509.1| DNA topoisomerase 1 [Macaca mulatta]
Length = 767
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>gi|332209058|ref|XP_003253628.1| PREDICTED: DNA topoisomerase 1 [Nomascus leucogenys]
Length = 767
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>gi|296200465|ref|XP_002747610.1| PREDICTED: DNA topoisomerase 1 [Callithrix jacchus]
Length = 767
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>gi|345790055|ref|XP_534420.3| PREDICTED: DNA topoisomerase 1 [Canis lupus familiaris]
Length = 770
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 688 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 737
>gi|297079|emb|CAA79748.1| DNA topoisomerase I [Cricetulus griseus]
Length = 767
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>gi|449486172|ref|XP_002190040.2| PREDICTED: DNA topoisomerase 1 [Taeniopygia guttata]
Length = 766
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 42/46 (91%)
Query: 5 KKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
KK A+ R++EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 688 KKKAVQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 733
>gi|444729226|gb|ELW69653.1| DNA topoisomerase 1 [Tupaia chinensis]
Length = 730
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 648 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 697
>gi|38503303|sp|Q7YR26.1|TOP1_CERAE RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I
gi|32400376|dbj|BAC78678.1| topoisomerase I [Chlorocebus aethiops]
Length = 767
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>gi|11225260|ref|NP_003277.1| DNA topoisomerase 1 [Homo sapiens]
gi|114682024|ref|XP_514649.2| PREDICTED: DNA topoisomerase 1 [Pan troglodytes]
gi|397511150|ref|XP_003825942.1| PREDICTED: DNA topoisomerase 1 [Pan paniscus]
gi|426391693|ref|XP_004062202.1| PREDICTED: DNA topoisomerase 1 [Gorilla gorilla gorilla]
gi|12644118|sp|P11387.2|TOP1_HUMAN RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I
gi|339804|gb|AAA61206.1| topoisomerase I [Homo sapiens]
gi|119596400|gb|EAW75994.1| topoisomerase (DNA) I, isoform CRA_a [Homo sapiens]
gi|119596401|gb|EAW75995.1| topoisomerase (DNA) I, isoform CRA_a [Homo sapiens]
gi|158259347|dbj|BAF85632.1| unnamed protein product [Homo sapiens]
gi|410223172|gb|JAA08805.1| topoisomerase (DNA) I [Pan troglodytes]
gi|410249722|gb|JAA12828.1| topoisomerase (DNA) I [Pan troglodytes]
gi|410302634|gb|JAA29917.1| topoisomerase (DNA) I [Pan troglodytes]
gi|410337127|gb|JAA37510.1| topoisomerase (DNA) I [Pan troglodytes]
Length = 765
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 683 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 732
>gi|449284003|gb|EMC90586.1| DNA topoisomerase 1, partial [Columba livia]
Length = 747
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 42/46 (91%)
Query: 5 KKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
KK A+ R++EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 669 KKKAVQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 714
>gi|317418978|emb|CBN81016.1| DNA topoisomerase 1 [Dicentrarchus labrax]
Length = 755
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 42/46 (91%)
Query: 5 KKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
KK A+ R++EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 677 KKKAVQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 722
>gi|195396943|ref|XP_002057088.1| GJ16891 [Drosophila virilis]
gi|194146855|gb|EDW62574.1| GJ16891 [Drosophila virilis]
Length = 1045
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ DKK L RLK+QL KLE+QETD++ENKTIALGTSKLNYLDPRI+VAW
Sbjct: 963 IADKKGKILERLKDQLKKLELQETDRDENKTIALGTSKLNYLDPRITVAW 1012
>gi|440910957|gb|ELR60692.1| DNA topoisomerase 1, partial [Bos grunniens mutus]
Length = 750
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 668 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 717
>gi|297707097|ref|XP_002830355.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1 [Pongo abelii]
Length = 768
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 686 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 735
>gi|291409626|ref|XP_002721120.1| PREDICTED: DNA topoisomerase I [Oryctolagus cuniculus]
Length = 762
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 680 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 729
>gi|402882519|ref|XP_003904787.1| PREDICTED: DNA topoisomerase 1 [Papio anubis]
Length = 767
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>gi|119596402|gb|EAW75996.1| topoisomerase (DNA) I, isoform CRA_b [Homo sapiens]
Length = 768
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 686 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 735
>gi|12018294|ref|NP_072137.1| DNA topoisomerase 1 [Rattus norvegicus]
gi|51316560|sp|Q9WUL0.1|TOP1_RAT RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I
gi|4809197|gb|AAD30137.1|AF140782_1 DNA topoisomerase I [Rattus norvegicus]
gi|149043044|gb|EDL96618.1| topoisomerase (DNA) I [Rattus norvegicus]
Length = 767
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>gi|330417918|ref|NP_001193416.1| DNA topoisomerase 1 [Bos taurus]
gi|296480941|tpg|DAA23056.1| TPA: topoisomerase (DNA) I [Bos taurus]
Length = 769
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 687 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 736
>gi|112734855|ref|NP_033434.2| DNA topoisomerase 1 [Mus musculus]
gi|158518540|sp|Q04750.2|TOP1_MOUSE RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I
gi|123235350|emb|CAM20297.1| topoisomerase (DNA) I [Mus musculus]
gi|123239880|emb|CAM25349.1| topoisomerase (DNA) I [Mus musculus]
gi|148674342|gb|EDL06289.1| topoisomerase (DNA) I [Mus musculus]
gi|162319568|gb|AAI56380.1| Topoisomerase (DNA) I [synthetic construct]
gi|225000592|gb|AAI72687.1| Topoisomerase (DNA) I [synthetic construct]
Length = 767
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>gi|220618|dbj|BAA00950.1| DNA topoisomerase I [Mus musculus]
Length = 767
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>gi|351715322|gb|EHB18241.1| DNA topoisomerase 1, partial [Heterocephalus glaber]
Length = 749
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 667 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 716
>gi|338719276|ref|XP_001500244.3| PREDICTED: DNA topoisomerase 1-like [Equus caballus]
Length = 732
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 650 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 699
>gi|432864217|ref|XP_004070231.1| PREDICTED: DNA topoisomerase 1-like [Oryzias latipes]
Length = 597
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 43/50 (86%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ ++KK A+ R +E LLK+EVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 515 LVERKKAAVKRCEEHLLKMEVQATDREENKQIALGTSKLNYLDPRISVAW 564
>gi|339808|gb|AAA61208.1| DNA topoisomerase I (EC 5.99.1.2), partial [Homo sapiens]
Length = 109
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 27 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 76
>gi|322800615|gb|EFZ21584.1| hypothetical protein SINV_04104 [Solenopsis invicta]
Length = 1025
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL KLEVQ TD+EENK IAL TSKLNYLDPRISVAW
Sbjct: 945 DKKKKQLERLKDQLTKLEVQATDREENKEIALSTSKLNYLDPRISVAW 992
>gi|195448226|ref|XP_002071565.1| GK25865 [Drosophila willistoni]
gi|194167650|gb|EDW82551.1| GK25865 [Drosophila willistoni]
Length = 997
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKK L RLKEQL KLE+QETD++ENKTIAL TSKLNYLDPRISVAW
Sbjct: 916 ADKKGKQLERLKEQLKKLELQETDRDENKTIALSTSKLNYLDPRISVAW 964
>gi|309523|gb|AAA40466.1| DNA topoisomerase I [Mus musculus]
Length = 766
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 684 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 733
>gi|355563133|gb|EHH19695.1| DNA topoisomerase 1 [Macaca mulatta]
gi|355784486|gb|EHH65337.1| DNA topoisomerase 1 [Macaca fascicularis]
Length = 786
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 704 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 753
>gi|350594934|ref|XP_003134489.3| PREDICTED: DNA topoisomerase 1 [Sus scrofa]
Length = 809
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 727 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 776
>gi|344279640|ref|XP_003411595.1| PREDICTED: DNA topoisomerase 1-like [Loxodonta africana]
Length = 1085
Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/50 (76%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 1003 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 1052
>gi|2897591|emb|CAA50293.1| topoisomerase I [Mus musculus]
Length = 115
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 33 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 82
>gi|57639320|gb|AAW55580.1| TOP1 [Macaca fascicularis]
Length = 560
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 478 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 527
>gi|355725604|gb|AES08609.1| topoisomerase I [Mustela putorius furo]
Length = 699
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 618 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 667
>gi|344236993|gb|EGV93096.1| DNA topoisomerase 1 [Cricetulus griseus]
Length = 715
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 633 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 682
>gi|304273959|gb|ADM18417.1| topoisomerase I [Hesperus sp. SC-2010]
Length = 241
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
DKKK L RL++QL KLE+QETD++ENKTIALGTSKLNYLD RISVAW +++ D Y
Sbjct: 168 DKKKKMLERLRDQLAKLEIQETDRDENKTIALGTSKLNYLDLRISVAWCKKFDVPIDKIY 227
Query: 59 NWSGKTK 65
N + + K
Sbjct: 228 NKTQRDK 234
>gi|260784949|ref|XP_002587526.1| hypothetical protein BRAFLDRAFT_237079 [Branchiostoma floridae]
gi|229272674|gb|EEN43537.1| hypothetical protein BRAFLDRAFT_237079 [Branchiostoma floridae]
Length = 299
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 43/49 (87%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVA 49
M ++KK + RL+EQL+KLEVQ TDKEENK IALGTSKLNYLDPRISVA
Sbjct: 229 MLERKKKQMERLEEQLMKLEVQATDKEENKEIALGTSKLNYLDPRISVA 277
>gi|281352816|gb|EFB28400.1| hypothetical protein PANDA_006987 [Ailuropoda melanoleuca]
Length = 560
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 478 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 527
>gi|327281208|ref|XP_003225341.1| PREDICTED: DNA topoisomerase 1-like [Anolis carolinensis]
Length = 795
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 43/49 (87%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ KK A+ R++EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 714 VESKKKAVQRVEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 762
>gi|195132412|ref|XP_002010637.1| GI21653 [Drosophila mojavensis]
gi|193907425|gb|EDW06292.1| GI21653 [Drosophila mojavensis]
Length = 1043
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 43/49 (87%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKK L RLK+QL KLE+QETD++ENKTIALGTSKLNYLDPRI+VAW
Sbjct: 962 ADKKGKQLERLKDQLKKLELQETDRDENKTIALGTSKLNYLDPRITVAW 1010
>gi|304274019|gb|ADM18447.1| topoisomerase I [Xenopygus analis]
Length = 241
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 4/61 (6%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKT 64
L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW Y++ D YN + +
Sbjct: 174 LERLRDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKYDVPIDKIYNKTQRD 233
Query: 65 K 65
K
Sbjct: 234 K 234
>gi|37927501|gb|AAP69819.1| topoisomerase I [Bos taurus]
Length = 67
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 13 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 62
>gi|304273927|gb|ADM18401.1| topoisomerase I [Anchocerus sp. SC-2010]
Length = 241
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 4/61 (6%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKT 64
L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW Y++ D YN + +
Sbjct: 174 LERLRDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKYDVPIDKIYNKTQRD 233
Query: 65 K 65
K
Sbjct: 234 K 234
>gi|405964124|gb|EKC29641.1| DNA topoisomerase 1 [Crassostrea gigas]
Length = 938
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 41/47 (87%)
Query: 4 KKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K+KT RL+EQL KLEVQ TDKEENK IALGTSKLNYLDPRISVAW
Sbjct: 859 KRKTQQQRLEEQLTKLEVQATDKEENKEIALGTSKLNYLDPRISVAW 905
>gi|348564020|ref|XP_003467804.1| PREDICTED: DNA topoisomerase 1-like [Cavia porcellus]
Length = 760
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK +ALGTSKLNYLDPRI+VAW
Sbjct: 678 VVESKKKAVQRLEEQLMKLEVQATDREENKQVALGTSKLNYLDPRITVAW 727
>gi|304273971|gb|ADM18423.1| topoisomerase I [Nordus fungicola]
Length = 241
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 4/61 (6%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKT 64
L R+++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW Y++ D YN + +
Sbjct: 174 LERMRDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKYDVPIDKIYNKTQRD 233
Query: 65 K 65
K
Sbjct: 234 K 234
>gi|194894661|ref|XP_001978102.1| GG17874 [Drosophila erecta]
gi|190649751|gb|EDV47029.1| GG17874 [Drosophila erecta]
Length = 969
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK L RLK+QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 889 EKKGKQLERLKDQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 936
>gi|432859495|ref|XP_004069135.1| PREDICTED: DNA topoisomerase 1-like [Oryzias latipes]
Length = 750
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 42/46 (91%)
Query: 5 KKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K+ A+ R++EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 672 KRKAVQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 717
>gi|195045561|ref|XP_001991997.1| GH24453 [Drosophila grimshawi]
gi|193892838|gb|EDV91704.1| GH24453 [Drosophila grimshawi]
Length = 1063
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 42/49 (85%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKK L RLK+QL KLE+QETD++ENKTIAL TSKLNYLDPRISVAW
Sbjct: 982 ADKKAKQLERLKDQLKKLELQETDRDENKTIALSTSKLNYLDPRISVAW 1030
>gi|195478784|ref|XP_002100651.1| GE17178 [Drosophila yakuba]
gi|194188175|gb|EDX01759.1| GE17178 [Drosophila yakuba]
Length = 580
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK L RLK+QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 500 EKKGKQLERLKDQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 547
>gi|195356202|ref|XP_002044569.1| GM19769 [Drosophila sechellia]
gi|194132200|gb|EDW53822.1| GM19769 [Drosophila sechellia]
Length = 970
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 890 EKKGKQLDRLRDQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 937
>gi|195163872|ref|XP_002022773.1| GL14571 [Drosophila persimilis]
gi|194104796|gb|EDW26839.1| GL14571 [Drosophila persimilis]
Length = 1042
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/48 (81%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKK L RLK+QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 962 DKKGKQLERLKDQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 1009
>gi|443706334|gb|ELU02442.1| hypothetical protein CAPTEDRAFT_173543 [Capitella teleta]
Length = 757
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 42/49 (85%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KKK AL R +E L KLEVQ+TDK+ENK IALGTSKLNYLDPRISVAW
Sbjct: 676 VEKKKKALDRAQEMLHKLEVQQTDKDENKEIALGTSKLNYLDPRISVAW 724
>gi|340720974|ref|XP_003398903.1| PREDICTED: DNA topoisomerase 1-like [Bombus terrestris]
Length = 1027
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/42 (88%), Positives = 38/42 (90%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L RLKEQL KLEVQ TDKEENK IALGTSKLNYLDPRI+VAW
Sbjct: 953 LDRLKEQLTKLEVQATDKEENKEIALGTSKLNYLDPRITVAW 994
>gi|304273953|gb|ADM18414.1| topoisomerase I [Gastrisus sp. SC-2010]
Length = 241
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 4/61 (6%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKT 64
L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D YN + +
Sbjct: 174 LERLRDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIYNKTQRD 233
Query: 65 K 65
K
Sbjct: 234 K 234
>gi|386764449|ref|NP_001245679.1| topoisomerase 1, isoform D [Drosophila melanogaster]
gi|383293405|gb|AFH07393.1| topoisomerase 1, isoform D [Drosophila melanogaster]
Length = 970
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 890 EKKGKQLERLRDQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 937
>gi|24642136|ref|NP_511161.2| topoisomerase 1, isoform A [Drosophila melanogaster]
gi|62473712|ref|NP_001014742.1| topoisomerase 1, isoform C [Drosophila melanogaster]
gi|7293054|gb|AAF48440.1| topoisomerase 1, isoform A [Drosophila melanogaster]
gi|61677900|gb|AAX52496.1| topoisomerase 1, isoform C [Drosophila melanogaster]
gi|71834182|gb|AAZ41763.1| RE58921p [Drosophila melanogaster]
Length = 974
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 894 EKKGKQLERLRDQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 941
>gi|157838061|pdb|1A35|A Chain A, Human Topoisomerase IDNA COMPLEX
gi|157838062|pdb|1A36|A Chain A, Topoisomerase IDNA COMPLEX
Length = 591
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLN+LDPRI+VAW
Sbjct: 509 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNFLDPRITVAW 558
>gi|267147|sp|P30189.1|TOP1_DROME RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I
gi|158643|gb|AAA28951.1| topoisomerase I [Drosophila melanogaster]
gi|1772834|gb|AAC24158.1| DNA topoisomerase I [Drosophila melanogaster]
Length = 972
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 892 EKKGKQLERLRDQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 939
>gi|47227318|emb|CAF96867.1| unnamed protein product [Tetraodon nigroviridis]
Length = 806
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ KK A+ R+++QL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 725 VESKKKAVQRIEDQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 773
>gi|312374595|gb|EFR22117.1| hypothetical protein AND_15747 [Anopheles darlingi]
Length = 529
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 42/48 (87%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKK L RLKEQL KLE+QETD++ENKTIALGTSKLNYLDPRISVA
Sbjct: 475 DKKTKQLERLKEQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAC 522
>gi|40889577|pdb|1R49|A Chain A, Human Topoisomerase I (Topo70) Double Mutant K532rY723F
Length = 592
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLN+LDPRI+VAW
Sbjct: 510 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNFLDPRITVAW 559
>gi|292626781|ref|XP_002666448.1| PREDICTED: DNA topoisomerase 1 [Danio rerio]
Length = 748
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 41/46 (89%)
Query: 5 KKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
KK A+ R+ EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISV+W
Sbjct: 670 KKKAVQRISEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVSW 715
>gi|348503053|ref|XP_003439081.1| PREDICTED: DNA topoisomerase 1-like isoform 2 [Oreochromis
niloticus]
Length = 769
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 5 KKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K+ A+ R++EQL+KL+VQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 691 KRKAVQRIEEQLMKLQVQATDREENKQIALGTSKLNYLDPRISVAW 736
>gi|9954905|pdb|1EJ9|A Chain A, Crystal Structure Of Human Topoisomerase I Dna Complex
Length = 563
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLN+LDPRI+VAW
Sbjct: 481 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNFLDPRITVAW 530
>gi|348503051|ref|XP_003439080.1| PREDICTED: DNA topoisomerase 1-like isoform 1 [Oreochromis
niloticus]
Length = 759
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 5 KKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K+ A+ R++EQL+KL+VQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 681 KRKAVQRIEEQLMKLQVQATDREENKQIALGTSKLNYLDPRISVAW 726
>gi|15723144|emb|CAA23015.1| topoisomerase I alpha [Takifugu rubripes]
Length = 767
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 5 KKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K+ A+ R++EQL+KL+VQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 689 KRKAVQRIEEQLMKLQVQATDREENKQIALGTSKLNYLDPRISVAW 734
>gi|23200355|pdb|1LPQ|A Chain A, Human Dna Topoisomerase I (70 Kda) In Non-Covalent Complex
With A 22 Base Pair Dna Duplex Containing An 8-Oxog
Lesion
Length = 564
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLN+LDPRI+VAW
Sbjct: 482 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNFLDPRITVAW 531
>gi|304274017|gb|ADM18446.1| topoisomerase I [Xanthopygus sp. SC-2010]
Length = 241
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 4/61 (6%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKT 64
L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D YN + +
Sbjct: 174 LERLRDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIYNKTQRD 233
Query: 65 K 65
K
Sbjct: 234 K 234
>gi|304273925|gb|ADM18400.1| topoisomerase I [Anaquedius vernix]
Length = 241
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/42 (83%), Positives = 40/42 (95%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 174 LERLRDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 215
>gi|47211672|emb|CAF91446.1| unnamed protein product [Tetraodon nigroviridis]
Length = 783
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 5 KKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K+ A+ R++EQL+KL+VQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 705 KRKAVQRIEEQLMKLQVQATDREENKQIALGTSKLNYLDPRISVAW 750
>gi|24642138|ref|NP_727841.1| topoisomerase 1, isoform B [Drosophila melanogaster]
gi|22833158|gb|AAN09660.1| topoisomerase 1, isoform B [Drosophila melanogaster]
Length = 581
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 501 EKKGKQLERLRDQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 548
>gi|198414178|ref|XP_002124723.1| PREDICTED: similar to DNA topoisomerase I, partial [Ciona
intestinalis]
Length = 482
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 41/46 (89%)
Query: 5 KKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
KK + RL+EQL+KLEVQ TDKEENK IALGTSKLNYLDPRI+VAW
Sbjct: 404 KKKKVERLQEQLIKLEVQATDKEENKEIALGTSKLNYLDPRITVAW 449
>gi|473583|gb|AAB60380.1| DNA topoisomerase I, partial [Homo sapiens]
Length = 761
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKL+YLDPRI+VAW
Sbjct: 679 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLSYLDPRITVAW 728
>gi|255982630|gb|ACU45746.1| AT12251p [Drosophila melanogaster]
Length = 581
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 43/48 (89%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK L RL++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 501 EKKGKQLERLRDQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 548
>gi|304273951|gb|ADM18413.1| topoisomerase I [Elecatopselaphus sp. SC-2010]
Length = 241
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 49/61 (80%), Gaps = 4/61 (6%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKT 64
L R+++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D YN + +
Sbjct: 174 LERMRDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIYNKTQRD 233
Query: 65 K 65
K
Sbjct: 234 K 234
>gi|301766206|ref|XP_002918524.1| PREDICTED: DNA topoisomerase 1-like [Ailuropoda melanoleuca]
Length = 882
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 800 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 849
>gi|304273977|gb|ADM18426.1| topoisomerase I [Oligotergus sp. SC-2010]
Length = 241
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 49/61 (80%), Gaps = 4/61 (6%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKT 64
L R+++QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D YN + +
Sbjct: 174 LERMRDQLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIYNKTQRD 233
Query: 65 K 65
K
Sbjct: 234 K 234
>gi|381143853|gb|AFF58587.1| topoisomerase I, partial [Bembidion simplex]
Length = 233
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 40/48 (83%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLKEQL+KLEVQETD++ENK ALGTSKLNYLDP I V W
Sbjct: 179 DKKKKMLERLKEQLMKLEVQETDRDENKAXALGTSKLNYLDPXIXVXW 226
>gi|45384130|ref|NP_990441.1| DNA topoisomerase 1 [Gallus gallus]
gi|1786132|dbj|BAA19101.1| DNA topoisomerase I [Gallus gallus]
Length = 766
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 41/46 (89%)
Query: 5 KKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
KK A+ R++EQL+KLEVQ TD+EENK IAL TSKLNYLDPRISVAW
Sbjct: 688 KKKAVQRIEEQLMKLEVQATDREENKQIALSTSKLNYLDPRISVAW 733
>gi|156368098|ref|XP_001627533.1| predicted protein [Nematostella vectensis]
gi|156214446|gb|EDO35433.1| predicted protein [Nematostella vectensis]
Length = 502
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KKK + RL+EQL KLEV TDKEENK IALGTSKLNYLDPRI+VAW
Sbjct: 421 VEKKKAQVQRLEEQLFKLEVTATDKEENKEIALGTSKLNYLDPRITVAW 469
>gi|326931793|ref|XP_003212009.1| PREDICTED: DNA topoisomerase 1-like [Meleagris gallopavo]
Length = 758
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 42/49 (85%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ KK A+ R++EQL+KLEVQ TD+EENK IAL TSKLNYLDPRISVAW
Sbjct: 677 VESKKKAVQRIEEQLMKLEVQATDREENKQIALSTSKLNYLDPRISVAW 725
>gi|381143811|gb|AFF58566.1| topoisomerase I, partial [Bembidion punctulatum]
Length = 243
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK L RLK+QL KLE+ ETD++ENK IALGTSKLNYLDP ISVAW
Sbjct: 179 DKKKKMLERLKDQLTKLEILETDRDENKAIALGTSKLNYLDPXISVAW 226
>gi|395829416|ref|XP_003787855.1| PREDICTED: DNA topoisomerase 1 [Otolemur garnettii]
Length = 1006
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 43/50 (86%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEV TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 924 VVESKKKAVQRLEEQLMKLEVLATDREENKQIALGTSKLNYLDPRITVAW 973
>gi|332030376|gb|EGI70083.1| DNA topoisomerase 1 [Acromyrmex echinatior]
Length = 1016
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 40/48 (83%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KKK L R K+QL KLEVQ TD+EENK IAL TSKLNYLDPRISVAW
Sbjct: 936 EKKKKQLERFKDQLTKLEVQATDREENKEIALSTSKLNYLDPRISVAW 983
>gi|304273921|gb|ADM18398.1| topoisomerase I [Algon sp. SC-2010]
Length = 241
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 49/61 (80%), Gaps = 4/61 (6%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKT 64
L RL++QL KLE+QETD++ENKTI+LGTSKLNYLDPRISVAW +++ D YN + +
Sbjct: 174 LERLRDQLAKLEIQETDRDENKTISLGTSKLNYLDPRISVAWCKKFDVPIDKIYNKTQRD 233
Query: 65 K 65
K
Sbjct: 234 K 234
>gi|49227597|ref|NP_001001838.1| DNA topoisomerase I, mitochondrial precursor [Danio rerio]
gi|40841767|gb|AAR92364.1| mitochondrial topoisomerase I [Danio rerio]
gi|67678162|gb|AAH96851.1| Mitochondrial topoisomerase I [Danio rerio]
Length = 600
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 44/50 (88%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +KK+ A+ RL +QL KL++QETD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 518 LVEKKQKAVQRLCDQLKKLQLQETDREENKVIALGTSKLNYLDPRITVAW 567
>gi|332811202|ref|XP_003308650.1| PREDICTED: DNA topoisomerase 1-like [Pan troglodytes]
Length = 211
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 43/50 (86%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDP+I+V W
Sbjct: 129 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPKITVPW 178
>gi|113195566|ref|NP_001037789.1| topoisomerase (DNA) I, like [Danio rerio]
gi|108742084|gb|AAI17589.1| Topoisomerase (DNA) I, like [Danio rerio]
Length = 758
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/42 (83%), Positives = 39/42 (92%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L R++EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 684 LQRVEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 725
>gi|27065157|pdb|1K4S|A Chain A, Human Dna Topoisomerase I In Covalent Complex With A 22
Base Pair Dna Duplex
gi|27065161|pdb|1K4T|A Chain A, Human Dna Topoisomerase I (70 Kda) In Complex With The
Poison Topotecan And Covalent Complex With A 22 Base
Pair Dna Duplex
gi|66360101|pdb|1SC7|A Chain A, Human Dna Topoisomerase I (70 Kda) In Complex With The
Indenoisoquinoline Mj-Ii-38 And Covalent Complex With A
22 Base Pair Dna Duplex
gi|67463659|pdb|1T8I|A Chain A, Human Dna Topoisomerase I (70 Kda) In Complex With The
Poison Camptothecin And Covalent Complex With A 22 Base
Pair Dna Duplex
gi|71041604|pdb|1TL8|A Chain A, Human Dna Topoisomerase I (70 Kda) In Complex With The
Indenoisoquinoline Ai-Iii-52 And Covalent Complex With A
22 Base Pair Dna Duplex
Length = 592
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 43/50 (86%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLN LDPRI+VAW
Sbjct: 510 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNXLDPRITVAW 559
>gi|157838059|pdb|1A31|A Chain A, Human Reconstituted Dna Topoisomerase I In Covalent
Complex With A 22 Base Pair Dna Duplex
Length = 591
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 43/50 (86%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLN LDPRI+VAW
Sbjct: 509 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNXLDPRITVAW 558
>gi|432865646|ref|XP_004070544.1| PREDICTED: DNA topoisomerase 1-like [Oryzias latipes]
Length = 765
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 42/46 (91%)
Query: 5 KKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K+ A+ R++EQL+KL++Q TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 687 KRKAVQRIEEQLMKLQMQATDREENKQIALGTSKLNYLDPRISVAW 732
>gi|50513398|pdb|1RR8|C Chain C, Structural Mechanisms Of Camptothecin Resistance By
Mutations In Human Topoisomerase I
Length = 565
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 43/50 (86%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLN LDPRI+VAW
Sbjct: 483 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNXLDPRITVAW 532
>gi|28948850|pdb|1NH3|A Chain A, Human Topoisomerase I Ara-C Complex
Length = 563
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 43/50 (86%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLN LDPRI+VAW
Sbjct: 481 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNXLDPRITVAW 530
>gi|334311332|ref|XP_001381657.2| PREDICTED: DNA topoisomerase 1-like [Monodelphis domestica]
Length = 924
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 852 RLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 891
>gi|304273943|gb|ADM18409.1| topoisomerase I [Bolitogyrus sp. SC-2010]
Length = 241
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 48/61 (78%), Gaps = 4/61 (6%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKT 64
L RL++ L KLE+QETD++ENKTIALGTSKLNYLDPRISVAW +++ D YN + +
Sbjct: 174 LERLRDXLAKLEIQETDRDENKTIALGTSKLNYLDPRISVAWCKKFDVPIDKIYNKTQRD 233
Query: 65 K 65
K
Sbjct: 234 K 234
>gi|297683810|ref|XP_002819561.1| PREDICTED: DNA topoisomerase I, mitochondrial-like [Pongo abelii]
Length = 313
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 233 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 280
>gi|381143633|gb|AFF58477.1| topoisomerase I, partial [Bembidion bimaculatum]
Length = 218
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 39/43 (90%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPR 45
DKKK L RLKEQL+KLEVQETD++ENK IALGTSKLNYLDPR
Sbjct: 176 DKKKKMLERLKEQLMKLEVQETDRDENKAIALGTSKLNYLDPR 218
>gi|241709640|ref|XP_002413389.1| DNA topoisomerase type I, putative [Ixodes scapularis]
gi|215507203|gb|EEC16697.1| DNA topoisomerase type I, putative [Ixodes scapularis]
Length = 250
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 43/50 (86%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ ++KK + +L++Q+ KLEVQ TDKEENK IALGTSKLNYLDPRISVAW
Sbjct: 200 LLERKKKRMQQLEDQMKKLEVQATDKEENKQIALGTSKLNYLDPRISVAW 249
>gi|321463231|gb|EFX74248.1| hypothetical protein DAPPUDRAFT_109061 [Daphnia pulex]
Length = 543
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 38/40 (95%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+LKEQL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 471 KLKEQLMKLEVQATDREENKEIALGTSKLNYLDPRISVAW 510
>gi|397508523|ref|XP_003824702.1| PREDICTED: DNA topoisomerase 1-like [Pan paniscus]
Length = 211
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 42/50 (84%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD EENK IALGTSKLNYLDP+I+V W
Sbjct: 129 VVESKKKAVQRLEEQLMKLEVQATDPEENKQIALGTSKLNYLDPKITVPW 178
>gi|304273961|gb|ADM18418.1| topoisomerase I [Holisus sp. SC-2010]
Length = 231
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 40/48 (83%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KKK L RL +QL KLE+QETD++ENK IALGTSKLNYLDPRI AW
Sbjct: 168 EKKKKMLQRLHDQLNKLEIQETDRDENKAIALGTSKLNYLDPRIXXAW 215
>gi|442749081|gb|JAA66700.1| Putative dna topoisomerase i [Ixodes ricinus]
Length = 306
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 43/50 (86%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ ++KK + +L++Q+ KLEVQ TDKEENK IALGTSKLNYLDPRISVAW
Sbjct: 224 LLERKKKRMQQLEDQMKKLEVQATDKEENKQIALGTSKLNYLDPRISVAW 273
>gi|194381908|dbj|BAG64323.1| unnamed protein product [Homo sapiens]
Length = 477
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 316 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 363
>gi|147906312|ref|NP_001089537.1| topoisomerase (DNA) I, gene 2 [Xenopus laevis]
gi|66910831|gb|AAH97824.1| MGC115546 protein [Xenopus laevis]
Length = 503
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ R +EQL+++EVQ TD+EENK IAL TSKLNYLDPRISVAW
Sbjct: 421 VVESKKRAVQRTEEQLMRMEVQATDREENKQIALSTSKLNYLDPRISVAW 470
>gi|327278452|ref|XP_003223976.1| PREDICTED: DNA topoisomerase I, mitochondrial-like, partial [Anolis
carolinensis]
Length = 560
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KKK + +++EQL KL++Q TDKEENK IALGTSKLNYLDPRISVAW
Sbjct: 480 EKKKQRIEKIEEQLAKLDMQATDKEENKQIALGTSKLNYLDPRISVAW 527
>gi|66360105|pdb|1SEU|A Chain A, Human Dna Topoisomerase I (70 Kda) In Complex With The
Indolocarbazole Sa315f And Covalent Complex With A 22
Base Pair Dna Duplex
Length = 592
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 43/50 (86%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKL+ LDPRI+VAW
Sbjct: 510 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLSXLDPRITVAW 559
>gi|427788599|gb|JAA59751.1| Putative dna topoisomerase i [Rhipicephalus pulchellus]
Length = 967
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%), Gaps = 4/69 (5%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD- 56
+ ++KK L +L++Q+ KLEVQ DKEENK IALGTSKLNYLDPRISVAW +N+ D
Sbjct: 885 LLERKKKRLQQLEDQMKKLEVQAMDKEENKQIALGTSKLNYLDPRISVAWCKKWNVPIDK 944
Query: 57 FYNWSGKTK 65
YN + + K
Sbjct: 945 IYNKTQRDK 953
>gi|50513401|pdb|1RRJ|A Chain A, Structural Mechanisms Of Camptothecin Resistance By
Mutations In Human Topoisomerase I
Length = 565
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 43/50 (86%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKL+ LDPRI+VAW
Sbjct: 483 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLSXLDPRITVAW 532
>gi|349603771|gb|AEP99515.1| DNA topoisomerase 1-like protein, partial [Equus caballus]
Length = 75
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/42 (80%), Positives = 39/42 (92%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 1 VQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 42
>gi|20072751|gb|AAH27453.1| TOP1MT protein, partial [Homo sapiens]
Length = 101
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 21 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 68
>gi|194379456|dbj|BAG63694.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 423 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 470
>gi|386642871|ref|NP_001245375.1| DNA topoisomerase I, mitochondrial isoform 2 [Homo sapiens]
gi|386642873|ref|NP_001245376.1| DNA topoisomerase I, mitochondrial isoform 2 [Homo sapiens]
Length = 503
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 423 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 470
>gi|119602670|gb|EAW82264.1| topoisomerase (DNA) I, mitochondrial, isoform CRA_e [Homo sapiens]
Length = 540
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 460 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 507
>gi|189094079|gb|ACD75867.1| topoisomerase I [Calosoma scrutator]
Length = 281
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 37/37 (100%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+QL+KLEVQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 224 DQLVKLEVQETDKDENKSIALGTSKLNYLDPRISVAW 260
>gi|391327312|ref|XP_003738147.1| PREDICTED: DNA topoisomerase 1-like [Metaseiulus occidentalis]
Length = 1011
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 40/49 (81%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DKK+ L L++QL +L VQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 930 ADKKQKRLHALEDQLKRLHVQATDREENKQIALGTSKLNYLDPRISVAW 978
>gi|426360896|ref|XP_004047664.1| PREDICTED: DNA topoisomerase I, mitochondrial isoform 1 [Gorilla
gorilla gorilla]
Length = 601
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 521 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 568
>gi|163838768|ref|NP_001106268.1| DNA topoisomerase I, mitochondrial [Pan troglodytes]
gi|259533973|sp|A9Q1D5.1|TOP1M_PANTR RecName: Full=DNA topoisomerase I, mitochondrial; Short=TOP1mt;
Flags: Precursor
gi|145309115|gb|ABP57788.1| mitochondrial topoisomerase I [Pan troglodytes]
gi|410218816|gb|JAA06627.1| topoisomerase (DNA) I, mitochondrial [Pan troglodytes]
gi|410252832|gb|JAA14383.1| topoisomerase (DNA) I, mitochondrial [Pan troglodytes]
Length = 601
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 521 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 568
>gi|16418461|ref|NP_443195.1| DNA topoisomerase I, mitochondrial isoform 1 precursor [Homo
sapiens]
gi|20140694|sp|Q969P6.1|TOP1M_HUMAN RecName: Full=DNA topoisomerase I, mitochondrial; Short=TOP1mt;
Flags: Precursor
gi|15705401|gb|AAL05624.1|AF349017_1 topoisomerase I [Homo sapiens]
gi|15919359|gb|AAL10791.1| topoisomerase I [Homo sapiens]
gi|311346982|gb|ADP90416.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311346984|gb|ADP90417.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311346986|gb|ADP90418.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311346990|gb|ADP90420.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347000|gb|ADP90425.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347002|gb|ADP90426.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347004|gb|ADP90427.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347006|gb|ADP90428.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347008|gb|ADP90429.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347010|gb|ADP90430.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347016|gb|ADP90433.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347018|gb|ADP90434.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347020|gb|ADP90435.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347022|gb|ADP90436.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347024|gb|ADP90437.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347028|gb|ADP90439.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347030|gb|ADP90440.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347034|gb|ADP90442.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347036|gb|ADP90443.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347038|gb|ADP90444.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347040|gb|ADP90445.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347042|gb|ADP90446.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347046|gb|ADP90448.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347052|gb|ADP90451.1| mitochondrial DNA topoisomerase I [Homo sapiens]
Length = 601
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 521 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 568
>gi|30411085|gb|AAH52285.1| Topoisomerase (DNA) I, mitochondrial [Homo sapiens]
gi|48734759|gb|AAH71914.1| Topoisomerase (DNA) I, mitochondrial [Homo sapiens]
gi|311346978|gb|ADP90414.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311346992|gb|ADP90421.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311346994|gb|ADP90422.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311346996|gb|ADP90423.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347032|gb|ADP90441.1| mitochondrial DNA topoisomerase I [Homo sapiens]
Length = 601
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 521 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 568
>gi|410920491|ref|XP_003973717.1| PREDICTED: DNA topoisomerase 1-like [Takifugu rubripes]
gi|15723146|emb|CAA23016.1| topoisomerase I beta [Takifugu rubripes]
Length = 753
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 37/40 (92%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
R+ +QL+KLEVQ TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 681 RIDDQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 720
>gi|27881700|gb|AAH44646.1| TOP1MT protein [Homo sapiens]
Length = 602
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 522 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 569
>gi|430732223|gb|AGA55512.1| topoisomerase, partial [Carabus melancholicus]
Length = 205
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/36 (91%), Positives = 36/36 (100%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL+KLEVQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 167 QLVKLEVQETDKDENKSIALGTSKLNYLDPRISVAW 202
>gi|426360898|ref|XP_004047665.1| PREDICTED: DNA topoisomerase I, mitochondrial isoform 2 [Gorilla
gorilla gorilla]
Length = 503
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 423 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 470
>gi|397497408|ref|XP_003819503.1| PREDICTED: DNA topoisomerase I, mitochondrial isoform 1 [Pan
paniscus]
gi|397497410|ref|XP_003819504.1| PREDICTED: DNA topoisomerase I, mitochondrial isoform 2 [Pan
paniscus]
gi|397497412|ref|XP_003819505.1| PREDICTED: DNA topoisomerase I, mitochondrial isoform 3 [Pan
paniscus]
Length = 503
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 423 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 470
>gi|307574648|ref|NP_001182621.1| topoisomerase (DNA) I, gene 2 [Xenopus (Silurana) tropicalis]
Length = 775
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK + R +EQL+++EVQ TD+EENK IAL TSKLNYLDPRISVAW
Sbjct: 693 VVESKKRGVQRAEEQLMRMEVQATDREENKQIALSTSKLNYLDPRISVAW 742
>gi|115898767|ref|XP_801858.2| PREDICTED: DNA topoisomerase 1-like isoform 3, partial
[Strongylocentrotus purpuratus]
Length = 440
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 40/48 (83%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK + RL EQL KLE++ TDKEENK IALGTSKLNYLDPRISVAW
Sbjct: 360 EKKAKQVERLVEQLAKLEMKATDKEENKEIALGTSKLNYLDPRISVAW 407
>gi|221046148|dbj|BAH14751.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 423 EKKRWLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 470
>gi|221045214|dbj|BAH14284.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 423 EKKRWLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 470
>gi|332263525|ref|XP_003280802.1| PREDICTED: DNA topoisomerase I, mitochondrial isoform 2 [Nomascus
leucogenys]
Length = 503
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 423 EKKRRLLEKLQEQLAGLSVQATDKEENKQVALGTSKLNYLDPRISIAW 470
>gi|311346980|gb|ADP90415.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311346988|gb|ADP90419.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311346998|gb|ADP90424.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347012|gb|ADP90431.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347014|gb|ADP90432.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347026|gb|ADP90438.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347044|gb|ADP90447.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347048|gb|ADP90449.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347050|gb|ADP90450.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347054|gb|ADP90452.1| mitochondrial DNA topoisomerase I [Homo sapiens]
gi|311347056|gb|ADP90453.1| mitochondrial DNA topoisomerase I [Homo sapiens]
Length = 601
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL +L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 521 EKKRWLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 568
>gi|381143581|gb|AFF58451.1| topoisomerase I, partial [Amerizus (Tiruka) sp. DRM-2012]
Length = 239
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 37/37 (100%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+QL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 188 DQLVKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 224
>gi|339254408|ref|XP_003372427.1| DNA topoisomerase 1 [Trichinella spiralis]
gi|316967142|gb|EFV51618.1| DNA topoisomerase 1 [Trichinella spiralis]
Length = 560
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++KK L R +EQLLKL+V+ TDKEENK IAL TSKLNYLDPRISVAW
Sbjct: 480 EQKKKNLHRSEEQLLKLKVRATDKEENKEIALSTSKLNYLDPRISVAW 527
>gi|381143937|gb|AFF58629.1| topoisomerase I, partial [Typhlocharis armatus]
Length = 245
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 37/37 (100%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+QL+KLEVQETD++ENKTI+LGTSKLNYLDPRISVAW
Sbjct: 190 DQLVKLEVQETDRDENKTISLGTSKLNYLDPRISVAW 226
>gi|340378353|ref|XP_003387692.1| PREDICTED: DNA topoisomerase 1-like [Amphimedon queenslandica]
Length = 712
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/42 (80%), Positives = 38/42 (90%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L +L+EQL KLE+Q TDKEENK IALGTSKLNYLDPRISV+W
Sbjct: 638 LPKLEEQLKKLEIQATDKEENKEIALGTSKLNYLDPRISVSW 679
>gi|340378351|ref|XP_003387691.1| PREDICTED: hypothetical protein LOC100640755 [Amphimedon
queenslandica]
Length = 1559
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/42 (80%), Positives = 38/42 (90%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L +L+EQL KLE+Q TDKEENK IALGTSKLNYLDPRISV+W
Sbjct: 1485 LPKLEEQLKKLEIQATDKEENKEIALGTSKLNYLDPRISVSW 1526
>gi|383847196|ref|XP_003699241.1| PREDICTED: DNA topoisomerase 1-like [Megachile rotundata]
Length = 1033
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/37 (91%), Positives = 34/37 (91%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
EQL KLEVQ TDKEENK IALGTSKLNYLDPRISVAW
Sbjct: 964 EQLTKLEVQATDKEENKEIALGTSKLNYLDPRISVAW 1000
>gi|381143587|gb|AFF58454.1| topoisomerase I, partial [Asaphidion alaskanum]
Length = 243
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 45/56 (80%), Gaps = 4/56 (7%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKTK 65
+QL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW Y++ + YN + + K
Sbjct: 187 DQLVKLEVQETDRDENKAIALGTSKLNYLDPRISVAWCKKYDVPIEKIYNKTQRDK 242
>gi|313219335|emb|CBY16450.1| unnamed protein product [Oikopleura dioica]
Length = 325
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ KKK L RL++QL+KL+ +TD+EENK IALGTSKLNYLDPRI++ W
Sbjct: 244 SSKKKQQLARLEDQLIKLKCAKTDREENKEIALGTSKLNYLDPRITIGW 292
>gi|381143871|gb|AFF58596.1| topoisomerase I, partial [Bembidion stillaguamish]
Length = 247
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 35/36 (97%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 191 QLMKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143911|gb|AFF58616.1| topoisomerase I, partial [Merizodus nr. catapileanus DRM-2012]
Length = 245
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 36/36 (100%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 191 QLVKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 226
>gi|332263523|ref|XP_003280801.1| PREDICTED: DNA topoisomerase I, mitochondrial isoform 1 [Nomascus
leucogenys]
Length = 601
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 34/48 (70%), Positives = 40/48 (83%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL L VQ TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 521 EKKRRLLEKLQEQLAGLSVQATDKEENKQVALGTSKLNYLDPRISIAW 568
>gi|326676003|ref|XP_002665372.2| PREDICTED: DNA topoisomerase 1 [Danio rerio]
Length = 735
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 36/40 (90%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
R +EQLLK+EVQ TD+EENK IAL TSKLNYLDPRISVAW
Sbjct: 663 RCEEQLLKMEVQATDREENKQIALSTSKLNYLDPRISVAW 702
>gi|189094077|gb|ACD75866.1| topoisomerase I [Macrogyrus oblongus]
Length = 263
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 36/36 (100%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
Q+++LEVQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 225 QMIRLEVQETDKDENKSIALGTSKLNYLDPRISVAW 260
>gi|189094087|gb|ACD75871.1| topoisomerase I [Asaphidion yukonense]
Length = 247
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 35/36 (97%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL+KLEVQETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 191 QLIKLEVQETDRDENKAIALGTSKLNYLDPRISVAW 226
>gi|381143915|gb|AFF58618.1| topoisomerase I, partial [Oopterus helmsi]
Length = 228
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 36/36 (100%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL+KLEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 181 QLVKLEVQETDRDENKSIALGTSKLNYLDPRISVAW 216
>gi|189094085|gb|ACD75870.1| topoisomerase I [Sirdenus grayii]
Length = 247
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/36 (91%), Positives = 35/36 (97%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL KLEVQETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 191 QLKKLEVQETDRDENKTIALGTSKLNYLDPRISVAW 226
>gi|345313087|ref|XP_001519186.2| PREDICTED: DNA topoisomerase I, mitochondrial-like, partial
[Ornithorhynchus anatinus]
Length = 1043
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 36/39 (92%)
Query: 12 LKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++EQL+KL VQ TDKEENK IALGTSKLNYLDPRISVAW
Sbjct: 972 IEEQLMKLSVQATDKEENKQIALGTSKLNYLDPRISVAW 1010
>gi|381143935|gb|AFF58628.1| topoisomerase I, partial [Thalassotrechus barbarae]
Length = 237
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 44/55 (80%), Gaps = 4/55 (7%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKTK 65
QL KLEVQETD++ENKTIALGTSKLNYLDPRISVAW Y++ + YN + + K
Sbjct: 181 QLKKLEVQETDRDENKTIALGTSKLNYLDPRISVAWCKKYDVPIEKIYNKTQRDK 235
>gi|430732227|gb|AGA55514.1| topoisomerase, partial [Carabus rugosus]
Length = 185
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+QL+KL VQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 146 DQLVKLNVQETDKDENKSIALGTSKLNYLDPRISVAW 182
>gi|430732219|gb|AGA55510.1| topoisomerase, partial [Carabus rutilans]
gi|430732225|gb|AGA55513.1| topoisomerase, partial [Carabus rugosus]
Length = 205
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+QL+KL VQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 166 DQLVKLNVQETDKDENKSIALGTSKLNYLDPRISVAW 202
>gi|381143917|gb|AFF58619.1| topoisomerase I, partial [Phrypeus rickseckeri]
Length = 218
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 36/36 (100%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL++LEVQETD++ENK+IALGTSKLNYLDPRISVAW
Sbjct: 181 QLVRLEVQETDRDENKSIALGTSKLNYLDPRISVAW 216
>gi|304273949|gb|ADM18412.1| topoisomerase I [Diochus sp. SC-2010]
Length = 241
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 35/36 (97%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL KLE+QETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 180 QLNKLEIQETDRDENKTIALGTSKLNYLDPRISVAW 215
>gi|381143899|gb|AFF58610.1| topoisomerase I, partial [Diplochaetus planatus]
Length = 245
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 44/55 (80%), Gaps = 4/55 (7%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKTK 65
QL +LEVQETD++ENKTIALGTSKLNYLDPRISVAW Y++ + YN + + K
Sbjct: 190 QLKRLEVQETDRDENKTIALGTSKLNYLDPRISVAWCKKYDVPIEKIYNKTQRDK 244
>gi|430732211|gb|AGA55506.1| topoisomerase, partial [Carabus problematicus]
Length = 204
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 37/38 (97%)
Query: 13 KEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++QL++L VQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 164 RDQLVRLNVQETDKDENKSIALGTSKLNYLDPRISVAW 201
>gi|430732193|gb|AGA55497.1| topoisomerase, partial [Carabus lusitanicus brevis]
Length = 204
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 37/38 (97%)
Query: 13 KEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++QL++L VQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 165 RDQLVRLNVQETDKDENKSIALGTSKLNYLDPRISVAW 202
>gi|430732175|gb|AGA55488.1| topoisomerase, partial [Carabus lusitanicus helluo]
gi|430732179|gb|AGA55490.1| topoisomerase, partial [Carabus macrocephalus macrocephalus]
gi|430732187|gb|AGA55494.1| topoisomerase, partial [Carabus lusitanicus lusitanicus]
gi|430732195|gb|AGA55498.1| topoisomerase, partial [Carabus macrocephalus barcelecoanus]
gi|430732205|gb|AGA55503.1| topoisomerase, partial [Carabus dufouri baguenai]
Length = 205
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 37/38 (97%)
Query: 13 KEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++QL++L VQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 165 RDQLVRLNVQETDKDENKSIALGTSKLNYLDPRISVAW 202
>gi|430732191|gb|AGA55496.1| topoisomerase, partial [Carabus riffensis]
Length = 205
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 37/38 (97%)
Query: 13 KEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++QL++L VQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 165 RDQLVRLNVQETDKDENKSIALGTSKLNYLDPRISVAW 202
>gi|430732171|gb|AGA55486.1| topoisomerase, partial [Carabus ghiliani]
gi|430732197|gb|AGA55499.1| topoisomerase, partial [Carabus guadarramus]
gi|430732199|gb|AGA55500.1| topoisomerase, partial [Carabus guadarramus]
gi|430732201|gb|AGA55501.1| topoisomerase, partial [Carabus guadarramus]
Length = 205
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 37/38 (97%)
Query: 13 KEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++QL++L VQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 165 RDQLVRLNVQETDKDENKSIALGTSKLNYLDPRISVAW 202
>gi|381143919|gb|AFF58620.1| topoisomerase I, partial [Pogonus chalceus]
Length = 236
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 35/36 (97%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL +LEVQETD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 184 QLKRLEVQETDRDENKTIALGTSKLNYLDPRISVAW 219
>gi|381143597|gb|AFF58459.1| topoisomerase I, partial [Bembidarenas setiventre]
Length = 243
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 45/56 (80%), Gaps = 4/56 (7%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKTK 65
EQL+KLEV ETD++ENK+IALGTSKLNYLDPRISVAW Y++ + YN + + K
Sbjct: 188 EQLVKLEVLETDRDENKSIALGTSKLNYLDPRISVAWCKKYDVPIEKIYNKTQRDK 243
>gi|430732217|gb|AGA55509.1| topoisomerase, partial [Carabus monilis]
Length = 205
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 35/36 (97%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL+KL VQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 167 QLVKLNVQETDKDENKSIALGTSKLNYLDPRISVAW 202
>gi|312087220|ref|XP_003145386.1| DNA topoisomerase I [Loa loa]
gi|307759451|gb|EFO18685.1| DNA topoisomerase I [Loa loa]
Length = 701
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ R+KEQL KL++Q TDK+ENK IAL TSKLNYLDPRISVAW
Sbjct: 627 VDRIKEQLRKLKIQRTDKDENKQIALSTSKLNYLDPRISVAW 668
>gi|170590069|ref|XP_001899795.1| DNA topoisomerase I [Brugia malayi]
gi|158592714|gb|EDP31311.1| DNA topoisomerase I, putative [Brugia malayi]
Length = 751
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ R+KEQL KL++Q TDK+ENK IAL TSKLNYLDPRISVAW
Sbjct: 677 VDRVKEQLRKLKIQRTDKDENKQIALSTSKLNYLDPRISVAW 718
>gi|253740233|gb|ACT34665.1| topoisomerase family protein, partial [Caenorhabditis brenneri]
Length = 159
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + RLKEQL KL++ TDK+ENK IALGTSKLNYLDPRI+VAW
Sbjct: 76 EKAQKKYDRLKEQLKKLKIARTDKDENKQIALGTSKLNYLDPRITVAW 123
>gi|335286080|ref|XP_003355015.1| PREDICTED: DNA topoisomerase I, mitochondrial-like [Sus scrofa]
Length = 1114
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K++ L +L+EQL++L Q TDKEE K +ALGTSKLNYLDPRIS+AW
Sbjct: 1034 EKRRRRLEKLEEQLVRLGTQATDKEEGKQVALGTSKLNYLDPRISIAW 1081
>gi|430732215|gb|AGA55508.1| topoisomerase, partial [Carabus nemoralis]
Length = 205
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 35/36 (97%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL++L VQETDK+ENK+IALGTSKLNYLDPRISVAW
Sbjct: 167 QLVRLNVQETDKDENKSIALGTSKLNYLDPRISVAW 202
>gi|402587841|gb|EJW81775.1| DNA topoisomerase 1 [Wuchereria bancrofti]
Length = 691
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ R+KEQL KL++Q TDK+ENK IAL TSKLNYLDPRISVAW
Sbjct: 617 VDRVKEQLRKLKIQRTDKDENKQIALSTSKLNYLDPRISVAW 658
>gi|381143589|gb|AFF58455.1| topoisomerase I, partial [Asaphidion cf. griseum DRM-2012]
Length = 213
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 34/36 (94%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL+KLEV ETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 176 QLMKLEVMETDRDENKAIALGTSKLNYLDPRISVAW 211
>gi|381143591|gb|AFF58456.1| topoisomerase I, partial [Asaphidion curtum]
Length = 245
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 34/36 (94%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL+KLEV ETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 189 QLMKLEVMETDRDENKAIALGTSKLNYLDPRISVAW 224
>gi|341902465|gb|EGT58400.1| CBN-TOP-1 protein [Caenorhabditis brenneri]
Length = 738
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + RLKEQL KL++ TDK+ENK IALGTSKLNYLDPRI+VAW
Sbjct: 655 EKAQKKYDRLKEQLKKLKIARTDKDENKQIALGTSKLNYLDPRITVAW 702
>gi|194215159|ref|XP_001496421.2| PREDICTED: DNA topoisomerase I, mitochondrial-like [Equus caballus]
Length = 655
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/48 (66%), Positives = 41/48 (85%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K++ L +L+EQL++L Q TDKEE+K +ALGTSKLNYLDPRISVAW
Sbjct: 575 EKRERLLEKLEEQLMRLSTQATDKEESKQVALGTSKLNYLDPRISVAW 622
>gi|355698261|gb|EHH28809.1| DNA topoisomerase I, mitochondrial [Macaca mulatta]
Length = 625
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL L VQ TDKEENK +AL TSKLNYLDPRIS+AW
Sbjct: 545 EKKRRLLEKLQEQLAWLSVQATDKEENKQVALSTSKLNYLDPRISIAW 592
>gi|395860138|ref|XP_003802372.1| PREDICTED: DNA topoisomerase I, mitochondrial, partial [Otolemur
garnettii]
Length = 572
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ +L +L+EQL +L Q T +EENK +ALGTSKLNYLDPRIS+AW
Sbjct: 492 EKKRRSLEKLQEQLARLSAQATAREENKQVALGTSKLNYLDPRISIAW 539
>gi|320168823|gb|EFW45722.1| DNA topoisomerase I [Capsaspora owczarzaki ATCC 30864]
Length = 821
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 51/67 (76%), Gaps = 4/67 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
+KKK A+ RLK ++ L +Q+TDK+ENKTIAL T+KLNYLDPRI+VAW Y++ + Y
Sbjct: 742 EKKKAAVERLKARVDSLVIQKTDKDENKTIALSTAKLNYLDPRITVAWCKRYDVPVEKIY 801
Query: 59 NWSGKTK 65
N + ++K
Sbjct: 802 NKTQRSK 808
>gi|402879309|ref|XP_003903288.1| PREDICTED: DNA topoisomerase I, mitochondrial isoform 2 [Papio
anubis]
Length = 614
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL L VQ TDKEENK +AL TSKLNYLDPRIS+AW
Sbjct: 534 EKKRRLLEKLQEQLAWLSVQATDKEENKQVALSTSKLNYLDPRISIAW 581
>gi|355765874|gb|EHH62465.1| DNA topoisomerase I, mitochondrial, partial [Macaca fascicularis]
Length = 570
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL L VQ TDKEENK +AL TSKLNYLDPRIS+AW
Sbjct: 490 EKKRRLLEKLQEQLAWLSVQATDKEENKQVALSTSKLNYLDPRISIAW 537
>gi|71989170|ref|NP_001021578.1| Protein TOP-1, isoform b [Caenorhabditis elegans]
gi|3878631|emb|CAB07639.1| Protein TOP-1, isoform b [Caenorhabditis elegans]
Length = 734
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + RLKEQL KL++ TDK+ENK IALGTSKLNY+DPRI+VAW
Sbjct: 651 EKAQKKYDRLKEQLKKLKISRTDKDENKQIALGTSKLNYIDPRITVAW 698
>gi|380794735|gb|AFE69243.1| DNA topoisomerase I, mitochondrial, partial [Macaca mulatta]
Length = 576
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL L VQ TDKEENK +AL TSKLNYLDPRIS+AW
Sbjct: 496 EKKRRLLEKLQEQLAWLSVQATDKEENKQVALSTSKLNYLDPRISIAW 543
>gi|17508321|ref|NP_493337.1| Protein TOP-1, isoform a [Caenorhabditis elegans]
gi|74957937|sp|O17966.1|TOP1_CAEEL RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I; Short=topoI
gi|3878632|emb|CAB07640.1| Protein TOP-1, isoform a [Caenorhabditis elegans]
Length = 806
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + RLKEQL KL++ TDK+ENK IALGTSKLNY+DPRI+VAW
Sbjct: 723 EKAQKKYDRLKEQLKKLKISRTDKDENKQIALGTSKLNYIDPRITVAW 770
>gi|1934847|emb|CAA65537.1| DNA topoisomerase [Caenorhabditis elegans]
Length = 806
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + RLKEQL KL++ TDK+ENK IALGTSKLNY+DPRI+VAW
Sbjct: 723 EKAQKKYDRLKEQLKKLKISRTDKDENKQIALGTSKLNYIDPRITVAW 770
>gi|402879307|ref|XP_003903287.1| PREDICTED: DNA topoisomerase I, mitochondrial isoform 1 [Papio
anubis]
Length = 600
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL L VQ TDKEENK +AL TSKLNYLDPRIS+AW
Sbjct: 520 EKKRRLLEKLQEQLAWLSVQATDKEENKQVALSTSKLNYLDPRISIAW 567
>gi|324501452|gb|ADY40648.1| DNA topoisomerase 1 [Ascaris suum]
Length = 723
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
R+KEQL +L++Q TDK+ENK IAL TSKLNYLDPRISVAW
Sbjct: 651 RIKEQLKRLKIQRTDKDENKQIALSTSKLNYLDPRISVAW 690
>gi|324500963|gb|ADY40435.1| DNA topoisomerase 1 [Ascaris suum]
Length = 723
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
R+KEQL +L++Q TDK+ENK IAL TSKLNYLDPRISVAW
Sbjct: 651 RIKEQLKRLKIQRTDKDENKQIALSTSKLNYLDPRISVAW 690
>gi|350582870|ref|XP_003125998.3| PREDICTED: DNA topoisomerase I, mitochondrial [Sus scrofa]
Length = 542
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K++ L +L+EQL++L Q TDKEE K +ALGTSKLNYLDPRIS+AW
Sbjct: 462 EKRRRRLEKLEEQLVRLGTQATDKEEGKQVALGTSKLNYLDPRISIAW 509
>gi|381143593|gb|AFF58457.1| topoisomerase I, partial [Asaphidion rossii]
Length = 260
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 34/36 (94%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL+KLEV ETD++ENK IALGTSKLNYLDPRISVAW
Sbjct: 218 QLVKLEVLETDRDENKAIALGTSKLNYLDPRISVAW 253
>gi|334326486|ref|XP_003340766.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase I,
mitochondrial-like [Monodelphis domestica]
Length = 683
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 34/38 (89%)
Query: 13 KEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+EQL++L Q TDKEENK +ALGTSKLNYLDPRISVAW
Sbjct: 613 EEQLMRLHTQATDKEENKQVALGTSKLNYLDPRISVAW 650
>gi|381143711|gb|AFF58516.1| topoisomerase I, partial [Bembidion gordoni]
Length = 236
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 33/36 (91%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL+KLEVQETD++ENK IALGTSKLNYLDP I VAW
Sbjct: 191 QLMKLEVQETDRDENKAIALGTSKLNYLDPXIXVAW 226
>gi|326918186|ref|XP_003205372.1| PREDICTED: DNA topoisomerase I, mitochondrial-like, partial
[Meleagris gallopavo]
Length = 521
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 33/36 (91%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL+KL VQ TDKEENK IALGTSKLNYLDPRIS+AW
Sbjct: 453 QLVKLNVQATDKEENKQIALGTSKLNYLDPRISIAW 488
>gi|348555915|ref|XP_003463768.1| PREDICTED: DNA topoisomerase I, mitochondrial-like [Cavia
porcellus]
Length = 596
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL L Q DKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 516 EKKQRLLQKLEEQLGHLSTQAIDKEENKHVALGTSKLNYLDPRISIAW 563
>gi|449281112|gb|EMC88275.1| DNA topoisomerase I, mitochondrial [Columba livia]
Length = 593
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 32/36 (88%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL KL VQ TDKEENK IALGTSKLNYLDPRIS+AW
Sbjct: 525 QLAKLNVQATDKEENKQIALGTSKLNYLDPRISIAW 560
>gi|47604922|ref|NP_001001300.1| DNA topoisomerase I, mitochondrial [Gallus gallus]
gi|40841765|gb|AAR92363.1| mitochondrial topoisomerase I [Gallus gallus]
Length = 593
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 32/36 (88%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL KL VQ TDKEENK IALGTSKLNYLDPRIS+AW
Sbjct: 525 QLAKLNVQATDKEENKQIALGTSKLNYLDPRISIAW 560
>gi|12851114|dbj|BAB28946.1| unnamed protein product [Mus musculus]
Length = 295
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 4 KKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K+ L +L+EQL +L + TDKEENK +ALGT+KLNYLDPRIS+AW
Sbjct: 216 QKQRRLLKLEEQLARLCAKATDKEENKQVALGTAKLNYLDPRISIAW 262
>gi|354496758|ref|XP_003510492.1| PREDICTED: DNA topoisomerase I, mitochondrial-like [Cricetulus
griseus]
gi|344255602|gb|EGW11706.1| DNA topoisomerase I, mitochondrial [Cricetulus griseus]
Length = 454
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 4 KKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K+ L +L+EQL +L + TDKEENK +ALGT+KLNYLDPRIS+AW
Sbjct: 375 RKQQRLLKLEEQLARLHKKATDKEENKQVALGTAKLNYLDPRISIAW 421
>gi|395512779|ref|XP_003760611.1| PREDICTED: DNA topoisomerase I, mitochondrial [Sarcophilus
harrisii]
Length = 834
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
EQL++L Q TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 765 EQLMRLCTQATDKEENKQVALGTSKLNYLDPRISIAW 801
>gi|351698448|gb|EHB01367.1| DNA topoisomerase I, mitochondrial [Heterocephalus glaber]
Length = 716
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L +L+EQL+ L + DKEENK +ALG SKLNYLDPRIS AW
Sbjct: 402 EKKQRLLRKLEEQLVHLSTRAIDKEENKQVALGASKLNYLDPRISTAW 449
>gi|358339245|dbj|GAA28973.2| DNA topoisomerase I [Clonorchis sinensis]
Length = 711
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 38/48 (79%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K L KEQL KL++Q TD++ENK IAL TSKLNYLDPRI+VAW
Sbjct: 604 EKLKKRLSVAKEQLAKLQLQATDRDENKEIALSTSKLNYLDPRITVAW 651
>gi|381143913|gb|AFF58617.1| topoisomerase I, partial [Ocys quinquestriatus]
Length = 217
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNY 41
DKKK +L RLK+QL+KLEVQETD++ENK IALGTSKLNY
Sbjct: 179 DKKKKSLERLKDQLMKLEVQETDRDENKAIALGTSKLNY 217
>gi|219518625|gb|AAI45337.1| Top1mt protein [Mus musculus]
Length = 592
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 4 KKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K+ L +L+EQL +L + TDKEENK +ALGT+KLNYLDPRIS+AW
Sbjct: 513 QKQRRLLKLEEQLARLCAKATDKEENKQVALGTAKLNYLDPRISIAW 559
>gi|50657345|ref|NP_082680.1| DNA topoisomerase I, mitochondrial [Mus musculus]
gi|81871438|sp|Q8R4U6.1|TOP1M_MOUSE RecName: Full=DNA topoisomerase I, mitochondrial; Short=TOP1mt;
Flags: Precursor
gi|19880190|gb|AAM00270.1|AF362952_1 DNA topoisomerase I [Mus musculus]
gi|74151135|dbj|BAE27691.1| unnamed protein product [Mus musculus]
gi|148697536|gb|EDL29483.1| DNA topoisomerase 1, mitochondrial [Mus musculus]
gi|187951989|gb|AAI38583.1| DNA topoisomerase 1, mitochondrial [Mus musculus]
gi|187953975|gb|AAI38584.1| DNA topoisomerase 1, mitochondrial [Mus musculus]
Length = 593
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 4 KKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K+ L +L+EQL +L + TDKEENK +ALGT+KLNYLDPRIS+AW
Sbjct: 514 QKQRRLLKLEEQLARLCAKATDKEENKQVALGTAKLNYLDPRISIAW 560
>gi|167527420|ref|XP_001748042.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773460|gb|EDQ87099.1| predicted protein [Monosiga brevicollis MX1]
Length = 2575
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/48 (64%), Positives = 37/48 (77%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
D K + RL+E+L K ++ + DKEENK IAL TSKLNYLDPRISVAW
Sbjct: 2334 DVLKRKVDRLEERLHKKQIAKVDKEENKCIALSTSKLNYLDPRISVAW 2381
>gi|50657355|ref|NP_001002798.1| DNA topoisomerase I, mitochondrial [Rattus norvegicus]
gi|81872302|sp|Q6IM78.1|TOP1M_RAT RecName: Full=DNA topoisomerase I, mitochondrial; Short=TOP1mt;
Flags: Precursor
gi|47131152|tpg|DAA02296.1| TPA_exp: mitochondrial DNA topoisomerase I [Rattus norvegicus]
gi|149066185|gb|EDM16058.1| DNA topoisomerase I, mitochondrial [Rattus norvegicus]
Length = 593
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 39/47 (82%)
Query: 4 KKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K+ L +L+EQL +L + TDKEENK +ALGT+KLNYLDPRIS+AW
Sbjct: 514 QKQQRLLKLEEQLARLCTKATDKEENKQVALGTAKLNYLDPRISIAW 560
>gi|256076899|ref|XP_002574746.1| DNA topoisomerase type I [Schistosoma mansoni]
gi|360044088|emb|CCD81635.1| putative dna topoisomerase type I [Schistosoma mansoni]
Length = 652
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 37/48 (77%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K L KE L KL++Q TD++ENK IAL TSKLNYLDPRISVAW
Sbjct: 605 EKLKKRLASAKEALSKLQLQATDRDENKEIALSTSKLNYLDPRISVAW 652
>gi|76163016|gb|ABA40876.1| SJCHGC07606 protein [Schistosoma japonicum]
Length = 58
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 37/48 (77%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K L KE L KL++Q TD++ENK IAL TSKLNYLDPRISVAW
Sbjct: 11 EKLKKRLASAKEALSKLQLQATDRDENKEIALSTSKLNYLDPRISVAW 58
>gi|5163186|gb|AAD40575.1|AF103749_1 topoisomerase I [Canis lupus familiaris]
Length = 43
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 37/43 (86%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLD 43
+ + KK A+ RL+EQL+KLEVQ TD+EENK IALGTSKLNYLD
Sbjct: 1 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLD 43
>gi|449495298|ref|XP_002187114.2| PREDICTED: DNA topoisomerase I, mitochondrial [Taeniopygia guttata]
Length = 548
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 32/36 (88%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
QL K+ +Q TDKEENK IALGTSKLNYLDPRI+VAW
Sbjct: 480 QLAKMNIQATDKEENKQIALGTSKLNYLDPRITVAW 515
>gi|119596403|gb|EAW75997.1| topoisomerase (DNA) I, isoform CRA_c [Homo sapiens]
Length = 715
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/33 (87%), Positives = 31/33 (93%)
Query: 18 KLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
KLEVQ TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 650 KLEVQATDREENKQIALGTSKLNYLDPRITVAW 682
>gi|326432616|gb|EGD78186.1| DNA binding/DNA topoisomerase type I [Salpingoeca sp. ATCC 50818]
Length = 791
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 36/45 (80%)
Query: 6 KTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K L RL+ +L K E+ + DKEENKTIAL TSKLNYLDPRISVAW
Sbjct: 714 KRKLERLELRLKKKEIAKIDKEENKTIALSTSKLNYLDPRISVAW 758
>gi|384495064|gb|EIE85555.1| hypothetical protein RO3G_10265 [Rhizopus delemar RA 99-880]
Length = 767
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%), Gaps = 3/51 (5%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD 56
+ ++ E++ ++ Q TD+EENK IALGTSKLNY+DPRISV W YN+ +
Sbjct: 694 IEKMDERIAAIKTQTTDREENKQIALGTSKLNYIDPRISVTWCKKYNVPLE 744
>gi|303270975|ref|XP_003054849.1| DNA topoisomerase I [Micromonas pusilla CCMP1545]
gi|226462823|gb|EEH60101.1| DNA topoisomerase I [Micromonas pusilla CCMP1545]
Length = 685
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K+ + +KE+L KLE+Q KE+ KT++LGTSK+NYLDPRI++AW
Sbjct: 606 EKNKSKISTMKERLAKLELQMKMKEDLKTVSLGTSKINYLDPRITIAW 653
>gi|196011882|ref|XP_002115804.1| hypothetical protein TRIADDRAFT_30199 [Trichoplax adhaerens]
gi|190581580|gb|EDV21656.1| hypothetical protein TRIADDRAFT_30199, partial [Trichoplax
adhaerens]
Length = 560
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 12 LKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L QL KL + ETDK ENK +AL TSKLNY+DPRISVAW
Sbjct: 489 LNRQLHKLNLTETDKVENKEVALSTSKLNYMDPRISVAW 527
>gi|424513433|emb|CCO66055.1| DNA topoisomerase I [Bathycoccus prasinos]
Length = 850
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DK L LKE++ KL++Q KE KT++LGTSK+NYLDPRI++AW
Sbjct: 757 DKNHKKLPSLKERIQKLKLQMETKESLKTVSLGTSKINYLDPRITIAW 804
>gi|66811030|ref|XP_639222.1| DNA topoisomerase I [Dictyostelium discoideum AX4]
gi|74854702|sp|Q54RC3.1|TOP1_DICDI RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I
gi|60467826|gb|EAL65841.1| DNA topoisomerase I [Dictyostelium discoideum AX4]
Length = 893
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 6 KTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K + + +EQ+ K E+ +T K+E KT+ALGTSK+NYLDPRI+VAW
Sbjct: 818 KEKIAKYEEQIKKQEILKTGKDELKTVALGTSKINYLDPRITVAW 862
>gi|350638054|gb|EHA26410.1| hypothetical protein ASPNIDRAFT_206081 [Aspergillus niger ATCC
1015]
Length = 884
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 56/90 (62%), Gaps = 15/90 (16%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWSG 62
DK + A+ +L++++ +E+Q DKEENK +ALGTSK+NY+DPR++V ++ FD
Sbjct: 804 DKIEAAITKLEQRIETMELQAQDKEENKEVALGTSKINYIDPRLTVV-FSKKFD------ 856
Query: 63 KTKKVIKVESFNSLPSQAIKRRIDWDLSGL 92
+ +E F S++++ + +W + +
Sbjct: 857 -----VPIEKFF---SKSLREKFEWAIKSV 878
>gi|145229165|ref|XP_001388891.1| DNA topoisomerase 1 [Aspergillus niger CBS 513.88]
gi|134054991|emb|CAK36999.1| unnamed protein product [Aspergillus niger]
Length = 884
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 56/90 (62%), Gaps = 15/90 (16%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWSG 62
DK + A+ +L++++ +E+Q DKEENK +ALGTSK+NY+DPR++V ++ FD
Sbjct: 804 DKIEAAITKLEQRIETMELQAQDKEENKEVALGTSKINYIDPRLTVV-FSKKFD------ 856
Query: 63 KTKKVIKVESFNSLPSQAIKRRIDWDLSGL 92
+ +E F S++++ + +W + +
Sbjct: 857 -----VPIEKFF---SKSLREKFEWAIKSV 878
>gi|358372024|dbj|GAA88629.1| topoisomerase I [Aspergillus kawachii IFO 4308]
Length = 889
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 56/90 (62%), Gaps = 15/90 (16%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWSG 62
DK + A+ +L++++ +E+Q DKEENK +ALGTSK+NY+DPR++V ++ FD
Sbjct: 809 DKLEAAITKLEQRIETMELQAQDKEENKEVALGTSKINYIDPRLTVV-FSKKFD------ 861
Query: 63 KTKKVIKVESFNSLPSQAIKRRIDWDLSGL 92
+ +E F S++++ + +W + +
Sbjct: 862 -----VPIEKFF---SKSLREKFEWAIKSV 883
>gi|430732173|gb|AGA55487.1| topoisomerase, partial [Carabus dufouri]
Length = 196
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 31/32 (96%)
Query: 13 KEQLLKLEVQETDKEENKTIALGTSKLNYLDP 44
++QL++L VQETDK+ENK+IALGTSKLNYLDP
Sbjct: 165 RDQLVRLNVQETDKDENKSIALGTSKLNYLDP 196
>gi|268561720|ref|XP_002646512.1| C. briggsae CBR-TOP-1 protein [Caenorhabditis briggsae]
Length = 730
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 28/30 (93%)
Query: 21 VQETDKEENKTIALGTSKLNYLDPRISVAW 50
+Q TDK+ENK IALGTSKLNY+DPRI+VAW
Sbjct: 665 IQRTDKDENKQIALGTSKLNYIDPRITVAW 694
>gi|328865609|gb|EGG13995.1| DNA topoisomerase I [Dictyostelium fasciculatum]
Length = 881
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DK + + L+EQ+ K E+ +T K+E T+ALGTSK+NYLDPRI+ AW
Sbjct: 803 DKLELKIASLEEQIKKQELTKTGKDETSTVALGTSKINYLDPRITAAW 850
>gi|307104172|gb|EFN52427.1| hypothetical protein CHLNCDRAFT_36846 [Chlorella variabilis]
Length = 532
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 34/42 (80%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L + + QLLK+E+ KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 459 LEKKQAQLLKMEITAKSKEDLKTVALGTSKINYLDPRITVAW 500
>gi|116181974|ref|XP_001220836.1| hypothetical protein CHGG_01615 [Chaetomium globosum CBS 148.51]
gi|88185912|gb|EAQ93380.1| hypothetical protein CHGG_01615 [Chaetomium globosum CBS 148.51]
Length = 907
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 7 TALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYN 52
TA+ +L E++ LE+Q D+E NK +ALGTSK+NY+DPR++V + N
Sbjct: 829 TAVEKLDERIRTLEMQSADREGNKEVALGTSKINYIDPRLTVVFSN 874
>gi|367018778|ref|XP_003658674.1| hypothetical protein MYCTH_2294738 [Myceliophthora thermophila ATCC
42464]
gi|347005941|gb|AEO53429.1| hypothetical protein MYCTH_2294738 [Myceliophthora thermophila ATCC
42464]
Length = 882
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 7 TALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYN 52
A+ +L E++ LE+Q D+E NK +ALGTSK+NY+DPR++VA+ N
Sbjct: 804 AAVEKLNERIRTLELQSADREGNKEVALGTSKINYIDPRLTVAFSN 849
>gi|255070017|ref|XP_002507090.1| DNA topoisomerase I [Micromonas sp. RCC299]
gi|226522365|gb|ACO68348.1| DNA topoisomerase I [Micromonas sp. RCC299]
Length = 635
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
D K + LKE+L KLE+Q K+E K+++LGTSK+NY+DPRI++AW
Sbjct: 556 DTNKAKIRTLKERLSKLELQMKMKDELKSVSLGTSKINYMDPRITIAW 603
>gi|323449565|gb|EGB05452.1| hypothetical protein AURANDRAFT_70313 [Aureococcus anophagefferens]
Length = 658
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
E++ KLE+ +KEENK ++LGTSK NYLDPRISVAW
Sbjct: 607 EKIKKLEIDLRNKEENKEVSLGTSKANYLDPRISVAW 643
>gi|426236003|ref|XP_004011964.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase I, mitochondrial
[Ovis aries]
Length = 601
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 2/40 (5%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+L+EQLL+ V DKEE+K +ALGTSKLNYLDPR+ V W
Sbjct: 531 KLEEQLLR--VSMXDKEESKQVALGTSKLNYLDPRVGVTW 568
>gi|323448323|gb|EGB04223.1| hypothetical protein AURANDRAFT_70404 [Aureococcus anophagefferens]
Length = 651
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
E++ KLE+ +KEENK ++LGTSK NYLDPRISVAW
Sbjct: 575 EKIKKLEIDLRNKEENKEVSLGTSKANYLDPRISVAW 611
>gi|119497075|ref|XP_001265305.1| topoisomerase I [Neosartorya fischeri NRRL 181]
gi|119413467|gb|EAW23408.1| topoisomerase I [Neosartorya fischeri NRRL 181]
Length = 886
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 39/48 (81%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + A+ +L++++ +E+Q DKEENK +ALGTSK+NY+DPR++V +
Sbjct: 806 EKLEAAITKLEQRIETMELQAQDKEENKEVALGTSKINYIDPRLTVVF 853
>gi|449546699|gb|EMD37668.1| hypothetical protein CERSUDRAFT_114313 [Ceriporiopsis subvermispora
B]
Length = 895
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
TDK + A+ +L E++ ++Q D+E K +ALGTSK+NYLDPRI+ AW
Sbjct: 815 TDKIEDAIEKLDEKIKVFKLQMEDREAGKEVALGTSKINYLDPRITAAW 863
>gi|330842997|ref|XP_003293452.1| hypothetical protein DICPUDRAFT_50979 [Dictyostelium purpureum]
gi|325076220|gb|EGC30025.1| hypothetical protein DICPUDRAFT_50979 [Dictyostelium purpureum]
Length = 757
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 37/42 (88%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + ++Q+ KLE+Q+T K+E KT+ALGTSK+NYLDPRI+V++
Sbjct: 685 IDKYEKQIKKLEIQKTTKDELKTVALGTSKINYLDPRITVSF 726
>gi|395325235|gb|EJF57661.1| hypothetical protein DICSQDRAFT_68959 [Dichomitus squalens LYAD-421
SS1]
Length = 803
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 38/49 (77%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
T+K + A+ +L+E++ ++Q D+E K +ALGTSK+NYLDPRI+V+W
Sbjct: 723 TEKIEDAIEKLEERIKTFKLQMEDREAGKEVALGTSKINYLDPRITVSW 771
>gi|340924245|gb|EGS19148.1| topoisomerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 896
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYN 52
+K + A+ +L E++ LE+Q D+E NK +ALGTSK+NY+DPR++V + N
Sbjct: 814 EKLEAAIVKLDERIKTLELQSADREGNKEVALGTSKINYIDPRLTVVFSN 863
>gi|70990502|ref|XP_750100.1| topoisomerase I [Aspergillus fumigatus Af293]
gi|66847732|gb|EAL88062.1| topoisomerase I [Aspergillus fumigatus Af293]
gi|159130581|gb|EDP55694.1| topoisomerase I [Aspergillus fumigatus A1163]
Length = 998
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 39/49 (79%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + A+ +L++++ +E+Q DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 917 VEKLEAAITKLEQRIETMELQAQDKEDNKEVALGTSKINYIDPRLTVVF 965
>gi|159490590|ref|XP_001703256.1| DNA topoisomerase I [Chlamydomonas reinhardtii]
gi|158280180|gb|EDP05938.1| DNA topoisomerase I [Chlamydomonas reinhardtii]
Length = 586
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 35/44 (79%)
Query: 7 TALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + + K+ + K+E+Q KE+ KT+ALGTSK+NY+DPRI+VAW
Sbjct: 511 SKIDKKKQAIAKVELQARSKEDLKTVALGTSKINYMDPRITVAW 554
>gi|145352995|ref|XP_001420818.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581053|gb|ABO99111.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 491
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 5 KKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K L LKE+ KL +Q KEE KT++LGTSK+NYLDPRI+++W
Sbjct: 402 QKKKLAALKERQSKLAIQMNMKEELKTVSLGTSKINYLDPRITLSW 447
>gi|281202242|gb|EFA76447.1| DNA topoisomerase I [Polysphondylium pallidum PN500]
Length = 874
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 1 MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ DK+K + KEQ+ K E+ T K+E T+ALGTSK+NYLDPRI+ AW
Sbjct: 797 LEDKRK----KFKEQIKKQELLRTGKDETSTVALGTSKINYLDPRITSAW 842
>gi|409045205|gb|EKM54686.1| hypothetical protein PHACADRAFT_96904 [Phanerochaete carnosa
HHB-10118-sp]
Length = 865
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
T+K + A+ +L E++ ++Q D+E K +ALGTSK+NYLDPRI+ AW
Sbjct: 785 TEKIEEAIQKLDEKIKTFKLQMEDREAGKEVALGTSKINYLDPRITAAW 833
>gi|357145005|ref|XP_003573489.1| PREDICTED: DNA topoisomerase 1-like [Brachypodium distachyon]
Length = 900
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 36/42 (85%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +++ ++ K+E+++ KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 827 ISQIETKIEKMEMEKKTKEDLKTVALGTSKINYLDPRITVAW 868
>gi|430732177|gb|AGA55489.1| topoisomerase, partial [Carabus dufouri]
Length = 195
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 30/31 (96%)
Query: 13 KEQLLKLEVQETDKEENKTIALGTSKLNYLD 43
++QL++L VQETDK+ENK+IALGTSKLNYLD
Sbjct: 165 RDQLVRLNVQETDKDENKSIALGTSKLNYLD 195
>gi|238483363|ref|XP_002372920.1| topoisomerase I [Aspergillus flavus NRRL3357]
gi|220700970|gb|EED57308.1| topoisomerase I [Aspergillus flavus NRRL3357]
Length = 881
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 39/48 (81%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + A+ +L++++ +E+Q DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 801 EKLENAIQKLEQRIETMELQAQDKEDNKEVALGTSKINYIDPRLTVVF 848
>gi|169766616|ref|XP_001817779.1| DNA topoisomerase 1 [Aspergillus oryzae RIB40]
gi|83765634|dbj|BAE55777.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391864823|gb|EIT74117.1| DNA topoisomerase I [Aspergillus oryzae 3.042]
Length = 881
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 39/48 (81%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + A+ +L++++ +E+Q DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 801 EKLENAIQKLEQRIETMELQAQDKEDNKEVALGTSKINYIDPRLTVVF 848
>gi|121703081|ref|XP_001269805.1| topoisomerase I [Aspergillus clavatus NRRL 1]
gi|119397948|gb|EAW08379.1| topoisomerase I [Aspergillus clavatus NRRL 1]
Length = 886
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 37/45 (82%)
Query: 6 KTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ A+ +L++++ +E+Q DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 809 EAAITKLEQRIETMELQAQDKEDNKEVALGTSKINYIDPRLTVVF 853
>gi|409080633|gb|EKM80993.1| hypothetical protein AGABI1DRAFT_119530 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 845
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
T+K + L +L E++ ++Q D++E K IALGTSK+NYLDPRI+ AW
Sbjct: 765 TEKIEEMLDKLTERVKAHKLQMIDRDETKEIALGTSKINYLDPRITAAW 813
>gi|426197547|gb|EKV47474.1| hypothetical protein AGABI2DRAFT_185414 [Agaricus bisporus var.
bisporus H97]
Length = 845
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
T+K + L +L E++ ++Q D++E K IALGTSK+NYLDPRI+ AW
Sbjct: 765 TEKIEEMLDKLTERVKAHKLQMIDRDETKEIALGTSKINYLDPRITAAW 813
>gi|258565969|ref|XP_002583729.1| DNA topoisomerase I [Uncinocarpus reesii 1704]
gi|237907430|gb|EEP81831.1| DNA topoisomerase I [Uncinocarpus reesii 1704]
Length = 889
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 15/84 (17%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWSGKTKKVI 68
L +L +++ + +Q DKEENK +ALGTSK+NY+DPR++V ++ FD +
Sbjct: 815 LAKLDQRIETMSLQAQDKEENKEVALGTSKINYIDPRLTVV-FSKKFD-----------V 862
Query: 69 KVESFNSLPSQAIKRRIDWDLSGL 92
+E F S+ ++ + DW + +
Sbjct: 863 PIEKFF---SKTLREKFDWAIKSV 883
>gi|308810078|ref|XP_003082348.1| putative DNA topoisomerase I (ISS) [Ostreococcus tauri]
gi|116060816|emb|CAL57294.1| putative DNA topoisomerase I (ISS) [Ostreococcus tauri]
Length = 783
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L LKE+ KL +Q KEE KT++LGTSK+NYLDPRI+++W
Sbjct: 686 LTALKERAAKLAIQMEMKEELKTVSLGTSKINYLDPRITLSW 727
>gi|326516458|dbj|BAJ92384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 72
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 35/42 (83%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +++ ++ K+E+ + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 19 ISQIETKIEKMEMDKKTKEDLKTVALGTSKINYLDPRITVAW 60
>gi|195433288|ref|XP_002064647.1| GK23720 [Drosophila willistoni]
gi|194160732|gb|EDW75633.1| GK23720 [Drosophila willistoni]
Length = 638
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 27/29 (93%)
Query: 22 QETDKEENKTIALGTSKLNYLDPRISVAW 50
+ET++EENK +AL TSKLNY+DPRISVAW
Sbjct: 566 EETNREENKCVALTTSKLNYIDPRISVAW 594
>gi|164424928|ref|XP_958033.2| DNA topoisomerase I [Neurospora crassa OR74A]
gi|157070718|gb|EAA28797.2| DNA topoisomerase I [Neurospora crassa OR74A]
Length = 874
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + AL +L +++ LE+Q D+E NK +ALGTSK+NY+DPR++V +
Sbjct: 792 EKLEAALEKLDQRIKNLELQSADREGNKEVALGTSKINYIDPRLTVVF 839
>gi|443923367|gb|ELU42619.1| topoisomerase I [Rhizoctonia solani AG-1 IA]
Length = 925
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
A+ +L E++ + + DKEE K +ALGTSK+NYLDPRI+ AW
Sbjct: 851 AITKLDEKIKMFKFKMQDKEEGKEVALGTSKINYLDPRITAAW 893
>gi|393217865|gb|EJD03354.1| hypothetical protein FOMMEDRAFT_20466 [Fomitiporia mediterranea
MF3/22]
Length = 824
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + A+ +L E++ ++Q D+EE K +ALGTSK+NYLDPRI+ AW
Sbjct: 745 EKIEEAIEKLTERIKTHKLQMVDREEGKEVALGTSKINYLDPRITQAW 792
>gi|67515943|ref|XP_657857.1| hypothetical protein AN0253.2 [Aspergillus nidulans FGSC A4]
gi|40746970|gb|EAA66126.1| hypothetical protein AN0253.2 [Aspergillus nidulans FGSC A4]
gi|259489529|tpe|CBF89874.1| TPA: Topoisomerase I [Source:UniProtKB/TrEMBL;Acc:Q875K2]
[Aspergillus nidulans FGSC A4]
Length = 871
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 39/49 (79%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + ++ +L++++ +E+Q DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 790 VEKLEASITKLQQRIENMELQAQDKEDNKEVALGTSKINYIDPRLTVVF 838
>gi|27752875|gb|AAO19447.1| topoisomerase I [Emericella nidulans]
Length = 871
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 39/49 (79%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + ++ +L++++ +E+Q DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 790 VEKLEASITKLQQRIENMELQAQDKEDNKEVALGTSKINYIDPRLTVVF 838
>gi|326490327|dbj|BAJ84827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 946
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 35/42 (83%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +++ ++ K+E+ + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 873 ISQIETKIEKMEMDKKTKEDLKTVALGTSKINYLDPRITVAW 914
>gi|2245428|gb|AAC39319.1| topoisomerase I [Emericella nidulans]
Length = 871
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 39/49 (79%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + ++ +L++++ +E+Q DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 790 VEKLEASITKLQQRIENMELQAQDKEDNKEVALGTSKINYIDPRLTVVF 838
>gi|343957943|emb|CBY93680.1| putative top1 protein, partial [Glomus diaphanum]
Length = 357
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD 56
+K + + ++ E++ + + + +KEENKT ALGTSK+NY+DPRIS AW Y++ D
Sbjct: 278 EKVEAQIEKVNERIKVVNLTKVEKEENKTTALGTSKINYIDPRISAAWCYKYDVPID 334
>gi|299751938|ref|XP_001830595.2| topoisomerase I [Coprinopsis cinerea okayama7#130]
gi|298409603|gb|EAU91226.2| topoisomerase I [Coprinopsis cinerea okayama7#130]
Length = 853
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
T+K + + +L +++ ++Q D++E K +ALGTSK+NYLDPRI+VAW
Sbjct: 773 TEKLEEMIEKLDDRIKTFKLQMIDRDEGKEVALGTSKINYLDPRITVAW 821
>gi|380090637|emb|CCC11632.1| putative TOP1 protein [Sordaria macrospora k-hell]
Length = 919
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + AL +L +++ LE+Q D+E NK +ALGTSK+NY+DPR++V +
Sbjct: 837 EKLEAALVKLDQRIKNLELQSADREGNKEVALGTSKINYIDPRLTVVF 884
>gi|336261184|ref|XP_003345383.1| TOP1 protein [Sordaria macrospora k-hell]
Length = 912
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + AL +L +++ LE+Q D+E NK +ALGTSK+NY+DPR++V +
Sbjct: 830 EKLEAALVKLDQRIKNLELQSADREGNKEVALGTSKINYIDPRLTVVF 877
>gi|384250287|gb|EIE23767.1| DNA topoisomerase I [Coccomyxa subellipsoidea C-169]
Length = 554
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%)
Query: 13 KEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNL 53
++ L KLE+ KE+ KT+ALGTSK+NYLDPRI+VAW L
Sbjct: 485 RDALKKLELNAKVKEDLKTVALGTSKINYLDPRITVAWCKL 525
>gi|365984679|ref|XP_003669172.1| hypothetical protein NDAI_0C02690 [Naumovozyma dairenensis CBS 421]
gi|343767940|emb|CCD23929.1| hypothetical protein NDAI_0C02690 [Naumovozyma dairenensis CBS 421]
Length = 780
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD 56
+K K + +L++++L +Q DKEEN ++LGTSKLNY+DPR++VA+ YN+ +
Sbjct: 699 VEKIKAQIEKLEQRILTATIQLKDKEENSEVSLGTSKLNYIDPRLNVAFCKKYNVPIE 756
>gi|402081270|gb|EJT76415.1| DNA topoisomerase 1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 929
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 35/44 (79%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYN 52
+ +++E++ LE+Q D++ NK +ALGTSK+NY+DPR++V + N
Sbjct: 853 IEKIEERIRNLEIQAADRDGNKEVALGTSKINYIDPRLTVVFCN 896
>gi|336464234|gb|EGO52474.1| DNA topoisomerase I [Neurospora tetrasperma FGSC 2508]
Length = 870
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + AL +L +++ LE+Q D+E NK +ALGTSK+NY+DPR++V +
Sbjct: 787 VEKLEAALLKLDQRIQTLELQSADREGNKEVALGTSKINYIDPRLTVVF 835
>gi|115474837|ref|NP_001061015.1| Os08g0154600 [Oryza sativa Japonica Group]
gi|27817923|dbj|BAC55688.1| putative DNA topoisomerase I [Oryza sativa Japonica Group]
gi|113622984|dbj|BAF22929.1| Os08g0154600 [Oryza sativa Japonica Group]
gi|222639933|gb|EEE68065.1| hypothetical protein OsJ_26075 [Oryza sativa Japonica Group]
Length = 916
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 35/42 (83%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +++ ++ K+E+ + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 843 ISQIETKIEKMEMDKKIKEDLKTVALGTSKINYLDPRITVAW 884
>gi|125560180|gb|EAZ05628.1| hypothetical protein OsI_27847 [Oryza sativa Indica Group]
Length = 916
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 35/42 (83%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +++ ++ K+E+ + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 843 ISQIETKIEKMEMDKKIKEDLKTVALGTSKINYLDPRITVAW 884
>gi|350296318|gb|EGZ77295.1| DNA topoisomerase I [Neurospora tetrasperma FGSC 2509]
Length = 870
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + AL +L +++ LE+Q D+E NK +ALGTSK+NY+DPR++V +
Sbjct: 787 VEKLEAALLKLDQRIKTLELQSADREGNKEVALGTSKINYIDPRLTVVF 835
>gi|187369229|dbj|BAG31375.1| topoisomerase I [Ophiorrhiza japonica]
Length = 927
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ ++ ++ K+E + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 854 MAQINAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAW 895
>gi|297803422|ref|XP_002869595.1| hypothetical protein ARALYDRAFT_329014 [Arabidopsis lyrata subsp.
lyrata]
gi|297315431|gb|EFH45854.1| hypothetical protein ARALYDRAFT_329014 [Arabidopsis lyrata subsp.
lyrata]
Length = 785
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 34/43 (79%), Gaps = 3/43 (6%)
Query: 11 RLKEQLLKLEVQETD---KEENKTIALGTSKLNYLDPRISVAW 50
++ +Q +K+E E D KE+ KT+ALGTSK+NY+DPRI+VAW
Sbjct: 711 KIAQQKMKIEKMEGDMQTKEDLKTVALGTSKINYMDPRITVAW 753
>gi|397642179|gb|EJK75068.1| hypothetical protein THAOC_03220 [Thalassiosira oceanica]
Length = 455
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+++ K+EV K++NK ++LGTSKLNY+DPRISVAW
Sbjct: 379 DKIKKMEVNIKHKDDNKEVSLGTSKLNYMDPRISVAW 415
>gi|224009518|ref|XP_002293717.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970389|gb|EED88726.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 536
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
E++ K+E+ K++NK ++LGTSKLNY+DPRISVAW
Sbjct: 460 EKIKKMELNIKHKDDNKEVSLGTSKLNYMDPRISVAW 496
>gi|392594024|gb|EIW83349.1| hypothetical protein CONPUDRAFT_164310 [Coniophora puteana
RWD-64-598 SS2]
Length = 828
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + A+ +L E++ ++Q D+E K +ALGTSK+NYLDPRI+ AW
Sbjct: 749 EKLEEAVQKLGEKIKTFKLQMDDREAGKEVALGTSKINYLDPRITAAW 796
>gi|392594020|gb|EIW83345.1| hypothetical protein CONPUDRAFT_52328 [Coniophora puteana
RWD-64-598 SS2]
Length = 795
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + A+ +L E++ ++Q D+E K +ALGTSK+NYLDPRI+ AW
Sbjct: 716 EKLEEAVQKLGEKIKTFKLQMDDREAGKEVALGTSKINYLDPRITAAW 763
>gi|334188421|ref|NP_001190544.1| DNA topoisomerase 1 [Arabidopsis thaliana]
gi|332009231|gb|AED96614.1| DNA topoisomerase 1 [Arabidopsis thaliana]
Length = 564
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Query: 11 RLKEQLLKLEVQETD---KEENKTIALGTSKLNYLDPRISVAW 50
++ +Q K+E E D KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 487 KIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDPRITVAW 529
>gi|115388445|ref|XP_001211728.1| DNA topoisomerase I [Aspergillus terreus NIH2624]
gi|114195812|gb|EAU37512.1| DNA topoisomerase I [Aspergillus terreus NIH2624]
Length = 872
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 35/42 (83%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +L++++ +E+Q DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 798 IQKLEQRIETMELQAQDKEDNKEVALGTSKINYIDPRLTVVF 839
>gi|297796403|ref|XP_002866086.1| TOP1BETA [Arabidopsis lyrata subsp. lyrata]
gi|297311921|gb|EFH42345.1| TOP1BETA [Arabidopsis lyrata subsp. lyrata]
Length = 922
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Query: 11 RLKEQLLKLEVQETD---KEENKTIALGTSKLNYLDPRISVAW 50
++ +Q K+E E D KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 843 KIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDPRITVAW 885
>gi|328769879|gb|EGF79922.1| hypothetical protein BATDEDRAFT_16830 [Batrachochytrium
dendrobatidis JAM81]
Length = 824
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 28/35 (80%), Gaps = 3/35 (8%)
Query: 25 DKEENKTIALGTSKLNYLDPRISVAW---YNLGFD 56
DK+ENKT ALGTSK+NY+DPRIS AW +N+ D
Sbjct: 767 DKDENKTTALGTSKINYIDPRISAAWCHKHNVPLD 801
>gi|325188249|emb|CCA22788.1| DNA topoisomerase putative [Albugo laibachii Nc14]
Length = 748
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 4 KKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
KK+T + K L + +Q DK +NK +ALGTSK+NY+DPRISVAW
Sbjct: 672 KKRTEAWKKKMNTLAIRLQ--DKSDNKQVALGTSKINYMDPRISVAW 716
>gi|15240492|ref|NP_200341.1| DNA topoisomerase 1 [Arabidopsis thaliana]
gi|267146|sp|P30181.1|TOP1_ARATH RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I
gi|16558|emb|CAA40763.1| topoisomerase I [Arabidopsis thaliana]
gi|9758162|dbj|BAB08547.1| DNA topoisomerase I [Arabidopsis thaliana]
gi|332009229|gb|AED96612.1| DNA topoisomerase 1 [Arabidopsis thaliana]
gi|445137|prf||1908437A topoisomerase I
Length = 916
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Query: 11 RLKEQLLKLEVQETD---KEENKTIALGTSKLNYLDPRISVAW 50
++ +Q K+E E D KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 839 KIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDPRITVAW 881
>gi|392569488|gb|EIW62661.1| hypothetical protein TRAVEDRAFT_114324 [Trametes versicolor
FP-101664 SS1]
Length = 799
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
A+ +L E++ ++Q D+E K +AL TSK+NYLDPRI+VAW
Sbjct: 725 AIDKLDEKIKAFKLQMEDREAGKEVALSTSKINYLDPRITVAW 767
>gi|256355115|ref|NP_001157806.1| topoisomerase I [Zea mays]
gi|240065169|gb|ACS44671.1| DNA topoisomerase I [Zea mays]
Length = 904
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 34/42 (80%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ L+ ++ K+E+ + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 831 VATLEGKIEKMEMDKRIKEDLKTVALGTSKINYLDPRITVAW 872
>gi|320170030|gb|EFW46929.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 727
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 41/53 (77%), Gaps = 4/53 (7%)
Query: 2 TDKKKTAL----GRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
T KK +AL + ++++++LEV++ KE+++ ++L TSK+NY+DPRISVAW
Sbjct: 630 TTKKYSALVERKKKAEDRIVQLEVKQETKEDSRALSLNTSKVNYIDPRISVAW 682
>gi|440804820|gb|ELR25686.1| eukaryotic dna topoisomerase, putative [Acanthamoeba castellanii
str. Neff]
Length = 782
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 6 KTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K A+ +L E++ +V+ K+E KTIALGTSK+NY+DPRI+ AW
Sbjct: 720 KKAIQKLDERIKNRKVEIEQKDELKTIALGTSKINYMDPRITAAW 764
>gi|334188419|ref|NP_001190543.1| DNA topoisomerase 1 [Arabidopsis thaliana]
gi|332009230|gb|AED96613.1| DNA topoisomerase 1 [Arabidopsis thaliana]
Length = 933
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Query: 11 RLKEQLLKLEVQETD---KEENKTIALGTSKLNYLDPRISVAW 50
++ +Q K+E E D KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 839 KIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDPRITVAW 881
>gi|50305025|ref|XP_452470.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641603|emb|CAH01321.1| KLLA0C06116p [Kluyveromyces lactis]
Length = 785
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K + +L++++ +Q DKE+N T+ALGTSK+NY+DPR+SVA+
Sbjct: 705 EKLKQNVEKLEKRITNCSLQLKDKEDNSTVALGTSKINYIDPRLSVAF 752
>gi|225465097|ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera]
gi|296082698|emb|CBI21703.3| unnamed protein product [Vitis vinifera]
Length = 857
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + ++ K+E + KE+ KT+ALGTSK+NYLDPRISVAW
Sbjct: 784 IAQTNAKIEKMERDKDTKEDLKTVALGTSKINYLDPRISVAW 825
>gi|413921287|gb|AFW61219.1| DNA topoisomerase I [Zea mays]
Length = 602
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 34/42 (80%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ L+ ++ K+E+ + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 529 VATLEGKIEKMEMDKRIKEDLKTVALGTSKINYLDPRITVAW 570
>gi|219884043|gb|ACL52396.1| unknown [Zea mays]
Length = 574
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 34/42 (80%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ L+ ++ K+E+ + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 501 VATLEGKIEKMEMDKRIKEDLKTVALGTSKINYLDPRITVAW 542
>gi|62321045|dbj|BAD94115.1| DNA topoisomerase I [Arabidopsis thaliana]
Length = 270
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Query: 11 RLKEQLLKLEVQETD---KEENKTIALGTSKLNYLDPRISVAW 50
++ +Q K+E E D KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 193 KIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDPRITVAW 235
>gi|403411987|emb|CCL98687.1| predicted protein [Fibroporia radiculosa]
Length = 893
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + A+ +L +++ ++Q D+E K +ALGTSK+NYLDPRI+ AW
Sbjct: 813 AEKIEEAIEKLDDKMKTFKLQMEDREAGKEVALGTSKINYLDPRITAAW 861
>gi|62320878|dbj|BAD93853.1| DNA topoisomerase I [Arabidopsis thaliana]
Length = 396
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Query: 11 RLKEQLLKLEVQETD---KEENKTIALGTSKLNYLDPRISVAW 50
++ +Q K+E E D KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 319 KIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDPRITVAW 361
>gi|389624723|ref|XP_003710015.1| DNA topoisomerase 1 [Magnaporthe oryzae 70-15]
gi|351649544|gb|EHA57403.1| DNA topoisomerase 1 [Magnaporthe oryzae 70-15]
gi|440474837|gb|ELQ43557.1| DNA topoisomerase 1 [Magnaporthe oryzae Y34]
gi|440480416|gb|ELQ61078.1| DNA topoisomerase 1 [Magnaporthe oryzae P131]
Length = 906
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 33/42 (78%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYN 52
+L E++ +E+Q D++ NK +ALGTSK+NY+DPR++V + N
Sbjct: 832 KLDERIRTMELQAADRDGNKEVALGTSKINYIDPRLTVVFCN 873
>gi|224116648|ref|XP_002317355.1| predicted protein [Populus trichocarpa]
gi|222860420|gb|EEE97967.1| predicted protein [Populus trichocarpa]
Length = 860
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+++ K+E+ KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 792 QKIEKMELSMKTKEDLKTVALGTSKINYLDPRITVAW 828
>gi|224061073|ref|XP_002300344.1| predicted protein [Populus trichocarpa]
gi|222847602|gb|EEE85149.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+++ K+E+ KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 809 QKIEKMEMAMKTKEDLKTVALGTSKINYLDPRITVAW 845
>gi|156085707|ref|XP_001610263.1| DNA topoisomerase [Babesia bovis]
gi|154797515|gb|EDO06695.1| DNA topoisomerase [Babesia bovis]
Length = 701
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%), Gaps = 4/47 (8%)
Query: 4 KKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K +TA+ R K +K+ + K++NKT+ALGTSK+NY+DPRI+VA+
Sbjct: 627 KLETAMKRSKVHAIKMRI----KDDNKTVALGTSKINYMDPRITVAF 669
>gi|255576254|ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus communis]
gi|223531500|gb|EEF33331.1| DNA topoisomerase type I, putative [Ricinus communis]
Length = 891
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+++ K+E+ KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 823 QRIEKMELNMKTKEDLKTVALGTSKINYLDPRITVAW 859
>gi|336384149|gb|EGO25297.1| DNA topoisomerase I [Serpula lacrymans var. lacrymans S7.9]
Length = 888
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +L E++ ++Q D+E K +ALGTSK+NYLDPRI+ AW
Sbjct: 815 IQKLDEKMKTFKLQMDDREAGKEVALGTSKINYLDPRITAAW 856
>gi|20258815|gb|AAM14018.1| putative DNA topoisomerase I [Arabidopsis thaliana]
Length = 514
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Query: 11 RLKEQLLKLEVQETD---KEENKTIALGTSKLNYLDPRISVAW 50
++ +Q K+E E D KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 437 KIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDPRITVAW 479
>gi|301118855|ref|XP_002907155.1| DNA topoisomerase, putative [Phytophthora infestans T30-4]
gi|262105667|gb|EEY63719.1| DNA topoisomerase, putative [Phytophthora infestans T30-4]
Length = 717
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 13 KEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K+++ L ++ DK +NK +ALGTSKLNY+DPRI+VAW
Sbjct: 648 KKKIKALSLRLQDKTDNKEVALGTSKLNYMDPRITVAW 685
>gi|209876474|ref|XP_002139679.1| DNA topoisomerase I [Cryptosporidium muris RN66]
gi|209555285|gb|EEA05330.1| DNA topoisomerase I, putative [Cryptosporidium muris RN66]
Length = 660
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 4/61 (6%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKT 64
L +K +L LE++ K++NKT++L TSKLNY+DPRISVA+ Y L D +N S +T
Sbjct: 587 LDSIKTKLSNLELKIKIKDDNKTVSLNTSKLNYMDPRISVAFCKKYELPIDKVFNRSLRT 646
Query: 65 K 65
K
Sbjct: 647 K 647
>gi|336371393|gb|EGN99732.1| hypothetical protein SERLA73DRAFT_106466 [Serpula lacrymans var.
lacrymans S7.3]
Length = 883
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +L E++ ++Q D+E K +ALGTSK+NYLDPRI+ AW
Sbjct: 792 IQKLDEKMKTFKLQMDDREAGKEVALGTSKINYLDPRITAAW 833
>gi|334683313|dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
Length = 920
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + ++ K+E + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 853 IAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAW 894
>gi|334683321|dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
Length = 920
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + ++ K+E + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 853 IAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAW 894
>gi|348690366|gb|EGZ30180.1| hypothetical protein PHYSODRAFT_358817 [Phytophthora sojae]
Length = 751
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 13 KEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K+++ L ++ DK +NK +ALGTSKLNY+DPRI+VAW
Sbjct: 682 KKKIKALSLRLQDKTDNKEVALGTSKLNYMDPRITVAW 719
>gi|4165154|gb|AAD08711.1| topoisomerase I [Nicotiana tabacum]
gi|14626487|gb|AAK69776.1| topoisomerase I [Nicotiana tabacum]
Length = 852
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 19 LEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+E Q KEE KT+ALGTSK+NYLDPRI+VAW
Sbjct: 814 IEKQIETKEELKTVALGTSKINYLDPRITVAW 845
>gi|255935477|ref|XP_002558765.1| Pc13g03270 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583385|emb|CAP91396.1| Pc13g03270 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 864
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 37/49 (75%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + ++ ++ +++ + VQ DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 783 VEKLENSINKIDQRVETMSVQAQDKEDNKEVALGTSKINYIDPRLTVVF 831
>gi|242078207|ref|XP_002443872.1| hypothetical protein SORBIDRAFT_07g003610 [Sorghum bicolor]
gi|241940222|gb|EES13367.1| hypothetical protein SORBIDRAFT_07g003610 [Sorghum bicolor]
Length = 921
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 38/47 (80%), Gaps = 2/47 (4%)
Query: 4 KKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+KK A+ ++ ++ K+E+ + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 845 EKKIAM--VEGKIDKMEMDKKIKEDLKTVALGTSKINYLDPRITVAW 889
>gi|390602536|gb|EIN11929.1| hypothetical protein PUNSTDRAFT_62929 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 780
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
A+ +L E++ ++Q D++ K +ALGTSK+NYLDPRI+ AW
Sbjct: 706 AIDKLTERITTTKLQMDDRDAGKEVALGTSKINYLDPRITAAW 748
>gi|334683317|dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ K+E + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 858 KIEKMERDKETKEDLKTVALGTSKINYLDPRITVAW 893
>gi|187369233|dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + ++ K+E + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 837 IAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAW 878
>gi|147853091|emb|CAN81282.1| hypothetical protein VITISV_037391 [Vitis vinifera]
Length = 1449
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 28/33 (84%)
Query: 18 KLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K+E + KE+ KT+ALGTSK+NYLDPRISVAW
Sbjct: 1385 KMERDKDTKEDLKTVALGTSKINYLDPRISVAW 1417
>gi|320033421|gb|EFW15369.1| DNA topoisomerase 1 [Coccidioides posadasii str. Silveira]
Length = 905
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 33/42 (78%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L +L +++ + +Q DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 831 LAKLDQRIDTMSLQAQDKEDNKEVALGTSKINYIDPRLTVVF 872
>gi|171687333|ref|XP_001908607.1| hypothetical protein [Podospora anserina S mat+]
gi|170943628|emb|CAP69280.1| unnamed protein product [Podospora anserina S mat+]
Length = 904
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 36/48 (75%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + A+ + +++ LE+Q D+E NK +ALGTSK+NY+DPR++V +
Sbjct: 822 EKLEAAVSKFDDRIKTLELQCADREGNKEVALGTSKINYIDPRLTVVF 869
>gi|119189549|ref|XP_001245381.1| hypothetical protein CIMG_04822 [Coccidioides immitis RS]
gi|392868286|gb|EAS34053.2| topoisomerase I [Coccidioides immitis RS]
Length = 905
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 33/42 (78%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L +L +++ + +Q DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 831 LAKLDQRIDTMSLQAQDKEDNKEVALGTSKINYIDPRLTVVF 872
>gi|303322999|ref|XP_003071491.1| DNA topoisomerase I, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240111193|gb|EER29346.1| DNA topoisomerase I, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 905
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 33/42 (78%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L +L +++ + +Q DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 831 LAKLDQRIDTMSLQAQDKEDNKEVALGTSKINYIDPRLTVVF 872
>gi|388579204|gb|EIM19531.1| putative DNA topoisomerase [Wallemia sebi CBS 633.66]
Length = 767
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 35/44 (79%)
Query: 7 TALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
T++ +++++L V ++K+E K ++LGTSK+NY+DPRI+VAW
Sbjct: 692 TSMQKIEDRLEAFRVNASNKDEIKDVSLGTSKINYIDPRITVAW 735
>gi|2642493|gb|AAC14193.1| DNA topoisomerase I [Physarum polycephalum]
Length = 1015
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWY-NLGFDF 57
+K K A+ R+ + K +++T+K+E K++AL TSK+NY+DPRI+ AW +G D
Sbjct: 936 EKCKAAIERVDTSINKWNIKKTEKDELKSVALTTSKINYIDPRITAAWAKRVGLDI 991
>gi|302680196|ref|XP_003029780.1| hypothetical protein SCHCODRAFT_58495 [Schizophyllum commune H4-8]
gi|300103470|gb|EFI94877.1| hypothetical protein SCHCODRAFT_58495 [Schizophyllum commune H4-8]
Length = 810
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNL 53
+K K + +L +++ + ++Q TDK+ K IALGTSK+NYLDPRI+ +W +
Sbjct: 731 EKIKDNIEKLDQRIKQTKLQITDKDAGKEIALGTSKINYLDPRITASWAKI 781
>gi|346324469|gb|EGX94066.1| topoisomerase I [Cordyceps militaris CM01]
Length = 900
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 35/44 (79%)
Query: 7 TALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
TA+ +L +++ LE+Q D++ NK +ALGTSK+NY+DPR++V +
Sbjct: 822 TAVEKLDDRVKVLELQAEDRDGNKEVALGTSKINYIDPRLTVVF 865
>gi|322707004|gb|EFY98583.1| topoisomerase I [Metarhizium anisopliae ARSEF 23]
Length = 907
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DK A+ +L E++ LE Q D++ NK +ALGTSK+NY+DPR++V +
Sbjct: 825 DKYLKAIEKLDERVKVLETQAEDRDGNKEVALGTSKINYIDPRLTVVF 872
>gi|5326994|emb|CAB46363.1| DNA topoisomerase I [Daucus carota]
Length = 909
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ K+E + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 842 KIEKMERDKETKEDLKTVALGTSKINYLDPRITVAW 877
>gi|225446979|ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
Length = 883
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 29/36 (80%), Gaps = 3/36 (8%)
Query: 18 KLEVQETD---KEENKTIALGTSKLNYLDPRISVAW 50
K+E E D KE+ KT+ALGTSK+NYLDPRISVAW
Sbjct: 816 KIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAW 851
>gi|14285799|sp|P93119.1|TOP1_DAUCA RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I
gi|1800221|gb|AAB41401.1| topoisomerase I [Daucus carota]
Length = 790
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ K+E + KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 723 KIEKMERDKETKEDLKTVALGTSKINYLDPRITVAW 758
>gi|405122155|gb|AFR96922.1| topoisomerase I [Cryptococcus neoformans var. grubii H99]
Length = 886
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 33/42 (78%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ R+ E++ +VQ D+++ K +ALGTSK+NY+DPR++VAW
Sbjct: 812 IARIDERIATAKVQLQDRDKLKDVALGTSKINYIDPRLTVAW 853
>gi|297739132|emb|CBI28783.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 29/36 (80%), Gaps = 3/36 (8%)
Query: 18 KLEVQETD---KEENKTIALGTSKLNYLDPRISVAW 50
K+E E D KE+ KT+ALGTSK+NYLDPRISVAW
Sbjct: 657 KIEKMERDMKTKEDLKTVALGTSKINYLDPRISVAW 692
>gi|322701021|gb|EFY92772.1| topoisomerase I [Metarhizium acridum CQMa 102]
Length = 909
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DK A+ +L E++ LE Q D++ NK +ALGTSK+NY+DPR++V +
Sbjct: 827 DKYLKAIEKLDERVKILETQAEDRDGNKEVALGTSKINYIDPRLTVVF 874
>gi|3172248|gb|AAC18442.1| topoisomerase I [Cryptococcus neoformans var. grubii]
Length = 844
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 33/42 (78%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ R+ E++ +VQ D+++ K +ALGTSK+NY+DPR++VAW
Sbjct: 770 IARIDERIATAKVQLQDRDKLKDVALGTSKINYIDPRLTVAW 811
>gi|58271538|ref|XP_572925.1| topoisomerase I [Cryptococcus neoformans var. neoformans JEC21]
gi|134115128|ref|XP_773862.1| hypothetical protein CNBH3140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256490|gb|EAL19215.1| hypothetical protein CNBH3140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229184|gb|AAW45618.1| topoisomerase I [Cryptococcus neoformans var. neoformans JEC21]
Length = 881
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 33/42 (78%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ R+ E++ +VQ D+++ K +ALGTSK+NY+DPR++VAW
Sbjct: 807 VARIDERIATAKVQLQDRDKLKDVALGTSKINYIDPRLTVAW 848
>gi|237638746|gb|ACR07927.1| topoisomerase I [Fusarium culmorum]
Length = 909
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DK A+ + E++ LE+Q D++ NK +ALGTSK+NY+DPR++V +
Sbjct: 827 DKFLKAVDKFDERIKTLELQAQDRDGNKEVALGTSKINYIDPRLTVVF 874
>gi|242803152|ref|XP_002484116.1| topoisomerase I [Talaromyces stipitatus ATCC 10500]
gi|218717461|gb|EED16882.1| topoisomerase I [Talaromyces stipitatus ATCC 10500]
Length = 864
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 17/85 (20%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWSGKTKKV- 67
+ +L++++ + +Q DKE NK +ALGTSK+NY+DPR++V + TKK
Sbjct: 790 VAKLEQRIETMSLQAEDKENNKEVALGTSKINYIDPRLTVVF-------------TKKFN 836
Query: 68 IKVESFNSLPSQAIKRRIDWDLSGL 92
+ +E F S+ ++ + DW + +
Sbjct: 837 VPIEKFF---SKTLREKFDWAIKSV 858
>gi|317447685|emb|CBK00914.1| topoisomerase 1 [Fusarium solani]
Length = 480
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DK A+ +L E++ LE Q D++ NK +ALGTSK+NY+DPR++V +
Sbjct: 415 VDKFIKAIEKLDERVKVLETQAEDRDGNKEVALGTSKINYIDPRLTVVF 463
>gi|302916741|ref|XP_003052181.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733120|gb|EEU46468.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 919
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
A+ +L E++ LE Q D++ NK +ALGTSK+NY+DPR++V +
Sbjct: 842 AIEKLDERVKVLETQAEDRDGNKEVALGTSKINYIDPRLTVVF 884
>gi|46124993|ref|XP_387050.1| hypothetical protein FG06874.1 [Gibberella zeae PH-1]
Length = 910
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DK A+ + E++ LE+Q D++ NK +ALGTSK+NY+DPR++V +
Sbjct: 828 DKFLKAVDKFDERIKTLELQAQDRDGNKEVALGTSKINYIDPRLTVVF 875
>gi|187369231|dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
Length = 894
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+G+ ++ K+E + KE KTIALGTSK++YLDPRI+VAW
Sbjct: 821 IGQTNAKIEKMERDKETKEGLKTIALGTSKISYLDPRITVAW 862
>gi|408388293|gb|EKJ67979.1| hypothetical protein FPSE_11790 [Fusarium pseudograminearum CS3096]
Length = 906
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DK A+ + E++ LE+Q D++ NK +ALGTSK+NY+DPR++V +
Sbjct: 824 DKFLKAVDKFDERIKTLELQAQDRDGNKEVALGTSKINYIDPRLTVVF 871
>gi|357162496|ref|XP_003579431.1| PREDICTED: DNA topoisomerase 1-like [Brachypodium distachyon]
Length = 807
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 21 VQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + + EE+KT+ALGTSK+NYLDPRI+VAW
Sbjct: 746 ITKNNTEESKTVALGTSKINYLDPRITVAW 775
>gi|425766626|gb|EKV05229.1| Topoisomerase I [Penicillium digitatum Pd1]
gi|425775277|gb|EKV13555.1| Topoisomerase I [Penicillium digitatum PHI26]
Length = 876
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 34/43 (79%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ ++ +++ + VQ DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 801 SITKIDQRVETMSVQAQDKEDNKEVALGTSKINYIDPRLTVVF 843
>gi|452001558|gb|EMD94017.1| hypothetical protein COCHEDRAFT_1222620 [Cochliobolus
heterostrophus C5]
Length = 903
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 15/84 (17%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWSGKTKKVI 68
+ +L +++ +++Q DKE NK +ALGTSK+NY+DPR++V ++ FD +
Sbjct: 829 IDKLHQRIENMKIQMEDKEGNKEVALGTSKINYIDPRLTVV-FSKKFD-----------V 876
Query: 69 KVESFNSLPSQAIKRRIDWDLSGL 92
+E F S+ ++ + DW + +
Sbjct: 877 PIERFF---SKTLREKFDWAIKSV 897
>gi|451849741|gb|EMD63044.1| hypothetical protein COCSADRAFT_336991 [Cochliobolus sativus
ND90Pr]
Length = 903
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 15/84 (17%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWSGKTKKVI 68
+ +L +++ +++Q DKE NK +ALGTSK+NY+DPR++V ++ FD +
Sbjct: 829 IDKLHQRIENMKIQMEDKEGNKEVALGTSKINYIDPRLTVV-FSKKFD-----------V 876
Query: 69 KVESFNSLPSQAIKRRIDWDLSGL 92
+E F S+ ++ + DW + +
Sbjct: 877 PIERFF---SKTLREKFDWAIKSV 897
>gi|410081714|ref|XP_003958436.1| hypothetical protein KAFR_0G02700 [Kazachstania africana CBS 2517]
gi|372465024|emb|CCF59301.1| hypothetical protein KAFR_0G02700 [Kazachstania africana CBS 2517]
Length = 754
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD 56
+K KT + +L++++ +Q DKEEN ++LGTSK+NY+DPR+SV + YN+ +
Sbjct: 673 VEKIKTQIEKLEQRIQISSIQLKDKEENSEVSLGTSKVNYIDPRLSVVFCKKYNVPIE 730
>gi|342890160|gb|EGU89024.1| hypothetical protein FOXB_00436 [Fusarium oxysporum Fo5176]
Length = 921
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFD 56
A+ + E++ LE+Q D++ NK +ALGTSK+NY+DPR++V ++ FD
Sbjct: 844 AVDKFDERIKTLELQAQDRDGNKEVALGTSKINYIDPRLTVV-FSKKFD 891
>gi|219121233|ref|XP_002185844.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582693|gb|ACI65314.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 594
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 30/36 (83%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ K+E+ K++NK ++LGTSK+NY+DPRISVAW
Sbjct: 519 KISKMEMDLKHKDDNKEVSLGTSKINYMDPRISVAW 554
>gi|186513885|ref|NP_001119063.1| DNA binding;DNA topoisomerase type Is [Arabidopsis thaliana]
gi|332659842|gb|AEE85242.1| DNA binding;DNA topoisomerase type Is [Arabidopsis thaliana]
Length = 69
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 30/37 (81%), Gaps = 3/37 (8%)
Query: 17 LKLEVQETD---KEENKTIALGTSKLNYLDPRISVAW 50
+K+E E D KE+ KT+ALGTSK+NY+DPRI+VAW
Sbjct: 1 MKIEKMERDMQTKEDLKTVALGTSKINYMDPRITVAW 37
>gi|401410206|ref|XP_003884551.1| hypothetical protein NCLIV_049500 [Neospora caninum Liverpool]
gi|325118969|emb|CBZ54521.1| hypothetical protein NCLIV_049500 [Neospora caninum Liverpool]
Length = 898
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 34/42 (80%), Gaps = 4/42 (9%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L R + LLK+++ K++NKT+ALGTSK+NY+DPRI+VA+
Sbjct: 829 LKRRADHLLKIKL----KDDNKTVALGTSKINYMDPRITVAF 866
>gi|84995602|ref|XP_952523.1| DNA topoisomerase i [Theileria annulata strain Ankara]
gi|65302684|emb|CAI74791.1| DNA topoisomerase i, putative [Theileria annulata]
Length = 999
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 6 KTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K L LK++ ++ T K+ NKT+ALGTSK+NY+DPRI+VA+
Sbjct: 923 KNKLATLKKKQKDHNIKMTIKDSNKTVALGTSKINYMDPRITVAF 967
>gi|22091413|gb|AAL87337.2| putative DNA topoisomerase I [Arabidopsis thaliana]
Length = 232
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%), Gaps = 3/36 (8%)
Query: 18 KLEVQETD---KEENKTIALGTSKLNYLDPRISVAW 50
K+E E D KE+ KT+ALGTSK+NY+DPRI+VAW
Sbjct: 159 KIEKMERDMQTKEDMKTVALGTSKINYMDPRITVAW 194
>gi|15240493|ref|NP_200342.1| DNA topoisomerase 1 beta [Arabidopsis thaliana]
gi|9758163|dbj|BAB08548.1| DNA topoisomerase I [Arabidopsis thaliana]
gi|110741973|dbj|BAE98926.1| DNA topoisomerase I like protein [Arabidopsis thaliana]
gi|332009232|gb|AED96615.1| DNA topoisomerase 1 beta [Arabidopsis thaliana]
Length = 917
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 29/36 (80%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ K+E KE+ KT+ALGTSK+NY+DPRI+VAW
Sbjct: 844 KIEKMERDMQTKEDMKTVALGTSKINYMDPRITVAW 879
>gi|297796405|ref|XP_002866087.1| TOP1alpha [Arabidopsis lyrata subsp. lyrata]
gi|297311922|gb|EFH42346.1| TOP1alpha [Arabidopsis lyrata subsp. lyrata]
Length = 911
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 29/36 (80%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ K+E KE+ KT+ALGTSK+NY+DPRI+VAW
Sbjct: 838 KIEKMERDMQTKEDMKTVALGTSKINYMDPRITVAW 873
>gi|294896326|ref|XP_002775501.1| DNA topoisomerase I, putative [Perkinsus marinus ATCC 50983]
gi|239881724|gb|EER07317.1| DNA topoisomerase I, putative [Perkinsus marinus ATCC 50983]
Length = 647
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Query: 11 RLKEQLLKLE---VQETDKEENKTIALGTSKLNYLDPRISVAW 50
++K Q L E +Q DKE+NKT++L TSK+NY+DPRISVA+
Sbjct: 573 KIKSQKLAAERTKIQIADKEDNKTVSLTTSKINYMDPRISVAF 615
>gi|406698572|gb|EKD01807.1| succinate dehydrogenase flavoprotein subunit precursor
[Trichosporon asahii var. asahii CBS 8904]
Length = 1549
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 34/43 (79%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
A+ +L +++ +VQ D+++ K +ALGTSK+NY+DPR++VAW
Sbjct: 795 AISKLDDRIATAKVQLGDRDKLKDVALGTSKINYIDPRLTVAW 837
>gi|212539988|ref|XP_002150149.1| topoisomerase I [Talaromyces marneffei ATCC 18224]
gi|212539990|ref|XP_002150150.1| topoisomerase I [Talaromyces marneffei ATCC 18224]
gi|210067448|gb|EEA21540.1| topoisomerase I [Talaromyces marneffei ATCC 18224]
gi|210067449|gb|EEA21541.1| topoisomerase I [Talaromyces marneffei ATCC 18224]
Length = 860
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 17/83 (20%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWSGKTKKV-IK 69
+L++++ + +Q DKE NK +ALGTSK+NY+DPR++V + TKK +
Sbjct: 788 KLEQRIENMSLQAEDKENNKEVALGTSKINYIDPRLTVVF-------------TKKFNVP 834
Query: 70 VESFNSLPSQAIKRRIDWDLSGL 92
+E F S+ ++ + DW + +
Sbjct: 835 IEKFF---SKTLREKFDWAIKSV 854
>gi|406866162|gb|EKD19202.1| eukaryotic DNA topoisomerase I [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 897
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 36/49 (73%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + A+ +L +++ + +Q D+E NK +ALGTSK+NY+DPR++V +
Sbjct: 813 VEKYEAAIKKLDDRITTMRLQAEDREGNKEVALGTSKINYIDPRLTVIF 861
>gi|302306949|ref|NP_983396.2| ACL008Cp [Ashbya gossypii ATCC 10895]
gi|299788764|gb|AAS51220.2| ACL008Cp [Ashbya gossypii ATCC 10895]
gi|374106602|gb|AEY95511.1| FACL008Cp [Ashbya gossypii FDAG1]
Length = 732
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 36/49 (73%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K + +L++++ +Q DKE+N T+AL TSK++Y+DPR+SVA+
Sbjct: 651 VEKLKAQIDKLEQRIRTTSIQMKDKEDNSTVALSTSKISYIDPRLSVAF 699
>gi|357467031|ref|XP_003603800.1| DNA topoisomerase I [Medicago truncatula]
gi|355492848|gb|AES74051.1| DNA topoisomerase I [Medicago truncatula]
Length = 921
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ K++ KE+ KT+ALGTSK+NYLDPRISVAW
Sbjct: 847 KIEKMQRDMHTKEDLKTVALGTSKINYLDPRISVAW 882
>gi|19113001|ref|NP_596209.1| DNA topoisomerase I [Schizosaccharomyces pombe 972h-]
gi|13432252|sp|P07799.2|TOP1_SCHPO RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I
gi|6723928|emb|CAB66458.1| DNA topoisomerase I [Schizosaccharomyces pombe]
Length = 814
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L +L E++ + Q DK+ENKT ALGTSK+NY+DPR++ ++
Sbjct: 741 LNKLNERINVMRTQMIDKDENKTTALGTSKINYIDPRLTYSF 782
>gi|401886620|gb|EJT50647.1| topoisomerase I [Trichosporon asahii var. asahii CBS 2479]
Length = 870
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 34/43 (79%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
A+ +L +++ +VQ D+++ K +ALGTSK+NY+DPR++VAW
Sbjct: 795 AISKLDDRIATAKVQLGDRDKLKDVALGTSKINYIDPRLTVAW 837
>gi|5119|emb|CAA29559.1| topoisomerase I [Schizosaccharomyces pombe]
Length = 812
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L +L E++ + Q DK+ENKT ALGTSK+NY+DPR++ ++
Sbjct: 739 LNKLNERINVMRTQMIDKDENKTTALGTSKINYIDPRLTYSF 780
>gi|225677787|gb|EEH16071.1| DNA topoisomerase [Paracoccidioides brasiliensis Pb03]
Length = 905
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 7/53 (13%)
Query: 5 KKTALGRLKEQLLKL-------EVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K + +L+ QLLKL +Q DKE NK +ALGTSK+NY+DPR++V +
Sbjct: 820 KGVTVEKLENQLLKLGQRIENMSLQAEDKENNKEVALGTSKINYIDPRLTVVF 872
>gi|449463731|ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
gi|449503189|ref|XP_004161878.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
Length = 889
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ K+E KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 822 KIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAW 857
>gi|295663479|ref|XP_002792292.1| DNA topoisomerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278962|gb|EEH34528.1| DNA topoisomerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 900
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 7/53 (13%)
Query: 5 KKTALGRLKEQLLKL-------EVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K + +L+ QLLKL +Q DKE NK +ALGTSK+NY+DPR++V +
Sbjct: 815 KGVTVEKLENQLLKLGQRIENMSLQAEDKENNKEVALGTSKINYIDPRLTVVF 867
>gi|302415000|ref|XP_003005332.1| DNA topoisomerase [Verticillium albo-atrum VaMs.102]
gi|261356401|gb|EEY18829.1| DNA topoisomerase [Verticillium albo-atrum VaMs.102]
Length = 891
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 32/40 (80%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+++E+ LE+Q D++ NK +ALGTSKLNY+DPR++V +
Sbjct: 818 KIEERAKNLELQAQDRDGNKEVALGTSKLNYIDPRLTVVF 857
>gi|346979589|gb|EGY23041.1| DNA topoisomerase [Verticillium dahliae VdLs.17]
Length = 909
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 32/40 (80%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+++E+ LE+Q D++ NK +ALGTSKLNY+DPR++V +
Sbjct: 836 KIEERAKNLELQAQDRDGNKEVALGTSKLNYIDPRLTVVF 875
>gi|240279786|gb|EER43291.1| topoisomerase I [Ajellomyces capsulatus H143]
gi|325092918|gb|EGC46228.1| topoisomerase I [Ajellomyces capsulatus H88]
Length = 909
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 7/53 (13%)
Query: 5 KKTALGRLKEQLLKLE-------VQETDKEENKTIALGTSKLNYLDPRISVAW 50
K + +L+ QLLKL +Q DKE NK +ALGTSK+NY+DPR++V +
Sbjct: 824 KGITIEKLENQLLKLSQRIENMSLQAEDKENNKEVALGTSKINYIDPRLTVVF 876
>gi|225562965|gb|EEH11244.1| topoisomerase I [Ajellomyces capsulatus G186AR]
Length = 909
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 7/53 (13%)
Query: 5 KKTALGRLKEQLLKLE-------VQETDKEENKTIALGTSKLNYLDPRISVAW 50
K + +L+ QLLKL +Q DKE NK +ALGTSK+NY+DPR++V +
Sbjct: 824 KGITIEKLENQLLKLSQRIENMSLQAEDKENNKEVALGTSKINYIDPRLTVVF 876
>gi|296421046|ref|XP_002840077.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636289|emb|CAZ84268.1| unnamed protein product [Tuber melanosporum]
Length = 938
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 37/48 (77%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + + +++E++ K E + +E+NKT+ALGTSK+NY+DPR++V +
Sbjct: 858 EKLEAQIQKMEERIKKQETEAQVREDNKTVALGTSKINYIDPRLTVMF 905
>gi|226287479|gb|EEH42992.1| DNA topoisomerase [Paracoccidioides brasiliensis Pb18]
Length = 825
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 7/53 (13%)
Query: 5 KKTALGRLKEQLLKL-------EVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K + +L+ QLLKL +Q DKE NK +ALGTSK+NY+DPR++V +
Sbjct: 740 KGVTVEKLENQLLKLGQRIENMSLQAEDKENNKEVALGTSKINYIDPRLTVVF 792
>gi|173004|gb|AAA35162.1| topoisomerase I [Saccharomyces cerevisiae]
Length = 769
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K + +L++++ +Q DKEEN ++LGTSK+NY+DPR+SV +
Sbjct: 688 VEKIKAQVEKLEQRIQTSSIQLKDKEENSQVSLGTSKINYIDPRLSVVF 736
>gi|402224180|gb|EJU04243.1| topoisomerase I [Dacryopinax sp. DJM-731 SS1]
Length = 846
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++K + A+ +L E++ Q TD+EE K ++L TSK NY+DPRI AW
Sbjct: 766 SEKIEEAIEKLDERIKNFRYQMTDREEGKEVSLTTSKTNYIDPRIIAAW 814
>gi|300121797|emb|CBK22371.2| unnamed protein product [Blastocystis hominis]
Length = 575
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 29/40 (72%), Gaps = 4/40 (10%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
RL + LKL D E NK +ALGTSK+NY+DPRI+VAW
Sbjct: 508 RLADGELKLR----DMESNKLVALGTSKINYMDPRITVAW 543
>gi|256273990|gb|EEU08906.1| Top1p [Saccharomyces cerevisiae JAY291]
Length = 745
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K + +L++++ +Q DKEEN ++LGTSK+NY+DPR+SV +
Sbjct: 664 VEKIKAQVEKLEQRIQTSSIQLKDKEENSQVSLGTSKINYIDPRLSVVF 712
>gi|190407336|gb|EDV10603.1| DNA topoisomerase I [Saccharomyces cerevisiae RM11-1a]
gi|259149480|emb|CAY86284.1| Top1p [Saccharomyces cerevisiae EC1118]
Length = 769
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K + +L++++ +Q DKEEN ++LGTSK+NY+DPR+SV +
Sbjct: 688 VEKIKAQVEKLEQRIQTSSIQLKDKEENSQVSLGTSKINYIDPRLSVVF 736
>gi|349581160|dbj|GAA26318.1| K7_Top1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 769
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K + +L++++ +Q DKEEN ++LGTSK+NY+DPR+SV +
Sbjct: 688 VEKIKAQVEKLEQRIQTSSIQLKDKEENSQVSLGTSKINYIDPRLSVVF 736
>gi|221483488|gb|EEE21807.1| DNA topoisomerase I, putative [Toxoplasma gondii GT1]
Length = 953
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 34/42 (80%), Gaps = 4/42 (9%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L R + LLK+++ K++NKT+ALGTSK+NY+DPRI+VA+
Sbjct: 884 LKRRADHLLKIKL----KDDNKTVALGTSKINYMDPRITVAF 921
>gi|6324568|ref|NP_014637.1| DNA topoisomerase 1 [Saccharomyces cerevisiae S288c]
gi|135993|sp|P04786.2|TOP1_YEAST RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I; AltName: Full=Maintenance of killer protein 1
gi|1419771|emb|CAA99005.1| TOP1 [Saccharomyces cerevisiae]
gi|151945624|gb|EDN63865.1| topoisomerase I [Saccharomyces cerevisiae YJM789]
gi|207341303|gb|EDZ69397.1| YOL006Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|285814884|tpg|DAA10777.1| TPA: DNA topoisomerase 1 [Saccharomyces cerevisiae S288c]
gi|365763239|gb|EHN04769.1| Top1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296327|gb|EIW07429.1| Top1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 769
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K + +L++++ +Q DKEEN ++LGTSK+NY+DPR+SV +
Sbjct: 688 VEKIKAQVEKLEQRIQTSSIQLKDKEENSQVSLGTSKINYIDPRLSVVF 736
>gi|403215856|emb|CCK70354.1| hypothetical protein KNAG_0E00860 [Kazachstania naganishii CBS
8797]
Length = 762
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + + +L+E++ VQ DKEEN ++LGTSK+NY+DPR+SV +
Sbjct: 681 VEKLQKQVQKLEERIKTATVQLRDKEENSEVSLGTSKINYIDPRLSVVF 729
>gi|221507958|gb|EEE33545.1| DNA topoisomerase I, putative [Toxoplasma gondii VEG]
Length = 953
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 34/42 (80%), Gaps = 4/42 (9%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L R + LLK+++ K++NKT+ALGTSK+NY+DPRI+VA+
Sbjct: 884 LKRRADHLLKIKL----KDDNKTVALGTSKINYMDPRITVAF 921
>gi|237839157|ref|XP_002368876.1| DNA topoisomerase I, putative [Toxoplasma gondii ME49]
gi|211966540|gb|EEB01736.1| DNA topoisomerase I, putative [Toxoplasma gondii ME49]
Length = 953
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 34/42 (80%), Gaps = 4/42 (9%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L R + LLK+++ K++NKT+ALGTSK+NY+DPRI+VA+
Sbjct: 884 LKRRADHLLKIKL----KDDNKTVALGTSKINYMDPRITVAF 921
>gi|320590738|gb|EFX03181.1| topoisomerase 1 [Grosmannia clavigera kw1407]
Length = 832
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 35/48 (72%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + A ++ E++ +E+Q DK+ NK +AL TSK+NY+DPR++V +
Sbjct: 750 EKLEAAAQKIDERIHNMELQAADKDGNKEVALSTSKINYIDPRLTVVF 797
>gi|169603291|ref|XP_001795067.1| hypothetical protein SNOG_04654 [Phaeosphaeria nodorum SN15]
gi|160706367|gb|EAT88414.2| hypothetical protein SNOG_04654 [Phaeosphaeria nodorum SN15]
Length = 887
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 15/84 (17%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWSGKTKKVI 68
+ ++ +++ + +Q DKE NK +ALGTSK+NY+DPR++V ++ FD +
Sbjct: 813 IDKINQRIENMRIQMEDKEGNKEVALGTSKINYIDPRLTVV-FSKKFD-----------V 860
Query: 69 KVESFNSLPSQAIKRRIDWDLSGL 92
+E F S+ ++ + DW + +
Sbjct: 861 PIEKFF---SKTLREKFDWAIKSV 881
>gi|401623691|gb|EJS41781.1| top1p [Saccharomyces arboricola H-6]
Length = 776
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K + +L++++ +Q DKEEN ++LGTSK+NY+DPR+SV +
Sbjct: 695 VEKIKAQVEKLEQRIQTSSIQLKDKEENSQVSLGTSKINYIDPRLSVVF 743
>gi|327355506|gb|EGE84363.1| DNA topoisomerase I [Ajellomyces dermatitidis ATCC 18188]
Length = 1048
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 7/53 (13%)
Query: 5 KKTALGRLKEQLLKLE-------VQETDKEENKTIALGTSKLNYLDPRISVAW 50
K + +L+ QLLKL +Q D+E NK +ALGTSK+NY+DPR++V +
Sbjct: 963 KGVTIEKLENQLLKLSQRIENMSLQAEDRENNKEVALGTSKINYIDPRLTVVF 1015
>gi|452980030|gb|EME79792.1| hypothetical protein MYCFIDRAFT_87962 [Pseudocercospora fijiensis
CIRAD86]
Length = 881
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 15/84 (17%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWSGKTKKVI 68
+ +L ++ +E+Q D++ NK +ALGTSK+NY+DPR++V ++ FD +
Sbjct: 807 IEKLDARIATMEMQAEDRDNNKEVALGTSKINYIDPRLTVV-FSKKFD-----------V 854
Query: 69 KVESFNSLPSQAIKRRIDWDLSGL 92
+E F S+ ++ + DW + +
Sbjct: 855 PIERFF---SKTLREKFDWAIKSV 875
>gi|358391412|gb|EHK40816.1| hypothetical protein TRIATDRAFT_301595 [Trichoderma atroviride IMI
206040]
Length = 912
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 35/48 (72%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DK +A+ ++ E++ LE Q D++ NK +AL TSK+NY+DPR++V +
Sbjct: 830 DKYLSAIEKIDERIRVLETQAEDRDGNKEVALSTSKINYIDPRLTVVF 877
>gi|429327307|gb|AFZ79067.1| DNA topoisomerase type I, putative [Babesia equi]
Length = 807
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%), Gaps = 4/45 (8%)
Query: 6 KTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+T R K+ +K+ + K+ NKT+ALGTSK+NY+DPRI+VA+
Sbjct: 735 QTVKKRQKDHSIKMRI----KDSNKTVALGTSKINYMDPRITVAF 775
>gi|302788430|ref|XP_002975984.1| hypothetical protein SELMODRAFT_151078 [Selaginella moellendorffii]
gi|300156260|gb|EFJ22889.1| hypothetical protein SELMODRAFT_151078 [Selaginella moellendorffii]
Length = 525
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L + ++ K+ + + KE+ KT+ALGTSK+NY+DPRI+VAW
Sbjct: 441 LAQTDARIAKMTLDLSVKEDLKTVALGTSKINYMDPRITVAW 482
>gi|323335697|gb|EGA76980.1| Top1p [Saccharomyces cerevisiae Vin13]
Length = 533
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K + +L++++ +Q DKEEN ++LGTSK+NY+DPR+SV +
Sbjct: 452 VEKIKAQVEKLEQRIQTSSIQLKDKEENSQVSLGTSKINYIDPRLSVVF 500
>gi|321262248|ref|XP_003195843.1| topoisomerase I [Cryptococcus gattii WM276]
gi|317462317|gb|ADV24056.1| topoisomerase I [Cryptococcus gattii WM276]
Length = 885
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 33/42 (78%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ ++ E++ +VQ D+++ K +ALGTSK+NY+DPR++VAW
Sbjct: 811 ISKIDERIATAKVQLQDRDKLKDVALGTSKINYIDPRLTVAW 852
>gi|452824469|gb|EME31472.1| DNA topoisomerase I [Galdieria sulphuraria]
Length = 780
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 34/44 (77%)
Query: 7 TALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + + ++++ K+ + + KEE K +ALGTSK+NYLDPRI+VAW
Sbjct: 705 SQIEKAEQRVEKIRLDMSMKEELKNVALGTSKINYLDPRITVAW 748
>gi|440639738|gb|ELR09657.1| hypothetical protein GMDG_04148 [Geomyces destructans 20631-21]
Length = 901
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 36/48 (75%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + A+ ++ +++ + +Q D+E NK +ALGTSK+NY+DPR++V +
Sbjct: 820 EKLQAAVEKIDQRITTMNLQAEDREGNKEVALGTSKINYIDPRLTVVF 867
>gi|302770158|ref|XP_002968498.1| hypothetical protein SELMODRAFT_145504 [Selaginella moellendorffii]
gi|300164142|gb|EFJ30752.1| hypothetical protein SELMODRAFT_145504 [Selaginella moellendorffii]
Length = 525
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L + ++ K+ + + KE+ KT+ALGTSK+NY+DPRI+VAW
Sbjct: 441 LAQTDARIAKMTLDLSVKEDLKTVALGTSKINYMDPRITVAW 482
>gi|261188450|ref|XP_002620640.1| DNA topoisomerase I [Ajellomyces dermatitidis SLH14081]
gi|239593240|gb|EEQ75821.1| DNA topoisomerase I [Ajellomyces dermatitidis SLH14081]
gi|239609381|gb|EEQ86368.1| DNA topoisomerase I [Ajellomyces dermatitidis ER-3]
Length = 911
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 7/53 (13%)
Query: 5 KKTALGRLKEQLLKLE-------VQETDKEENKTIALGTSKLNYLDPRISVAW 50
K + +L+ QLLKL +Q D+E NK +ALGTSK+NY+DPR++V +
Sbjct: 826 KGVTIEKLENQLLKLSQRIENMSLQAEDRENNKEVALGTSKINYIDPRLTVVF 878
>gi|3170997|gb|AAC18301.1| DNA topoisomerase I [Pneumocystis carinii]
Length = 763
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ ++ E++ +++ DK +NKT ALGTSK+NY+DPR++ AW
Sbjct: 690 IKKINERIHQMKALMIDKAQNKTTALGTSKINYIDPRLTYAW 731
>gi|302794059|ref|XP_002978794.1| hypothetical protein SELMODRAFT_152781 [Selaginella moellendorffii]
gi|300153603|gb|EFJ20241.1| hypothetical protein SELMODRAFT_152781 [Selaginella moellendorffii]
Length = 533
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 30/36 (83%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ K+E+ K++ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 466 KIQKMELDMKVKDDLKTVALGTSKINYLDPRITVAW 501
>gi|302794067|ref|XP_002978798.1| hypothetical protein SELMODRAFT_109207 [Selaginella moellendorffii]
gi|300153607|gb|EFJ20245.1| hypothetical protein SELMODRAFT_109207 [Selaginella moellendorffii]
Length = 597
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 30/36 (83%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ K+E+ K++ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 536 KIQKMELDMKVKDDLKTVALGTSKINYLDPRITVAW 571
>gi|344233086|gb|EGV64959.1| hypothetical protein CANTEDRAFT_121194 [Candida tenuis ATCC 10573]
Length = 748
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 37/49 (75%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K+ + ++++++L + Q DKE+N ++LGTSK+NY+DPR++V +
Sbjct: 667 VEKLKSQVEQIEQRILNTQFQLKDKEDNSEVSLGTSKMNYIDPRLTVVF 715
>gi|302805913|ref|XP_002984707.1| hypothetical protein SELMODRAFT_156783 [Selaginella moellendorffii]
gi|300147689|gb|EFJ14352.1| hypothetical protein SELMODRAFT_156783 [Selaginella moellendorffii]
Length = 579
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 30/36 (83%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ K+E+ K++ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 512 KIQKMELDMKVKDDLKTVALGTSKINYLDPRITVAW 547
>gi|50286731|ref|XP_445795.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525101|emb|CAG58714.1| unnamed protein product [Candida glabrata]
Length = 717
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 35/49 (71%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + A+ RL +++ +VQ D+E N ++LGTSK+NY+DPR+SV +
Sbjct: 636 VEKLEKAIERLDQRISTSQVQLQDREANSEVSLGTSKINYIDPRLSVVF 684
>gi|50291575|ref|XP_448220.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527531|emb|CAG61171.1| unnamed protein product [Candida glabrata]
Length = 744
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 10/59 (16%)
Query: 8 ALGRLKEQLLKLE-------VQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD 56
++ +L++Q+ KLE +Q DKEEN ++LGTSK+NY+DPR+SV + YN+ +
Sbjct: 662 SVEKLEKQVEKLEERIKTSSIQLKDKEENSQVSLGTSKINYIDPRLSVVFCKKYNVPIE 720
>gi|66363066|ref|XP_628499.1| eukaryotic DNA topoisomerase I [Cryptosporidium parvum Iowa II]
gi|46229815|gb|EAK90633.1| eukaryotic DNA topoisomerase I [Cryptosporidium parvum Iowa II]
Length = 653
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%), Gaps = 4/44 (9%)
Query: 26 KEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKTK 65
K++NKT+AL TSK+NY+DPRISVA+ Y+L D +N S +TK
Sbjct: 597 KDDNKTVALNTSKINYMDPRISVAFCKKYDLPIDKIFNRSLRTK 640
>gi|403353776|gb|EJY76433.1| Eukaryotic DNA topoisomerase I, catalytic core family protein
[Oxytricha trifallax]
Length = 617
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 6 KTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K + + +EQ + + T KE+NK ALGTSK+NY+DPRI+++W
Sbjct: 541 KIQIEKAREQYEQQLSRVTKKEQNKNYALGTSKINYMDPRITISW 585
>gi|357467017|ref|XP_003603793.1| DNA topoisomerase I [Medicago truncatula]
gi|355492841|gb|AES74044.1| DNA topoisomerase I [Medicago truncatula]
Length = 1009
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 29/36 (80%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ K++ KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 941 KIEKMQRDMHTKEDLKTVALGTSKINYLDPRITVAW 976
>gi|68071095|ref|XP_677461.1| topoisomerase I [Plasmodium berghei strain ANKA]
gi|56497590|emb|CAH96938.1| topoisomerase I, putative [Plasmodium berghei]
Length = 805
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 28/32 (87%)
Query: 19 LEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
LE Q +++NKTIALGTSK+NY+DPRI+VA+
Sbjct: 768 LENQMKVRDDNKTIALGTSKINYMDPRITVAF 799
>gi|389740120|gb|EIM81312.1| hypothetical protein STEHIDRAFT_67037 [Stereum hirsutum FP-91666
SS1]
Length = 794
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +L E++ ++Q D+E K +AL TSK+NYLDPRI+ AW
Sbjct: 721 ISKLDERMKTFKLQMLDREAGKEVALTTSKINYLDPRITAAW 762
>gi|82594992|ref|XP_725660.1| eukaryotic DNA topoisomerase I [Plasmodium yoelii yoelii 17XNL]
gi|23480748|gb|EAA17225.1| Eukaryotic DNA topoisomerase I, DNA binding, putative [Plasmodium
yoelii yoelii]
Length = 886
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 28/32 (87%)
Query: 19 LEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
LE Q +++NKTIALGTSK+NY+DPRI+VA+
Sbjct: 823 LENQMKVRDDNKTIALGTSKINYMDPRITVAF 854
>gi|378733270|gb|EHY59729.1| DNA topoisomerase I [Exophiala dermatitidis NIH/UT8656]
Length = 902
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + ++ + VQ DKE NK +ALGTSK+NY+DPR++V +
Sbjct: 828 IKKFDARIATMSVQAEDKENNKEVALGTSKINYIDPRLTVVF 869
>gi|358057102|dbj|GAA97009.1| hypothetical protein E5Q_03683 [Mixia osmundae IAM 14324]
Length = 863
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 7 TALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ +L E++ +Q D+EE K ++L TSK+NY+DPR+SV W
Sbjct: 788 ASIAKLTERIEAQRMQALDREEGKEVSLTTSKINYIDPRLSVVW 831
>gi|67623925|ref|XP_668245.1| DNA topoisomerase I [Cryptosporidium hominis TU502]
gi|54659457|gb|EAL38033.1| DNA topoisomerase I [Cryptosporidium hominis]
Length = 641
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%), Gaps = 4/44 (9%)
Query: 26 KEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FYNWSGKTK 65
K++NKT+AL TSK+NY+DPRISVA+ Y+L D +N S +TK
Sbjct: 585 KDDNKTVALNTSKINYMDPRISVAFCKKYDLPIDKIFNRSLRTK 628
>gi|71744850|ref|XP_827055.1| DNA topoisomerase type IB small subunit [Trypanosoma brucei
TREU927]
gi|70831220|gb|EAN76725.1| DNA topoisomerase type IB small subunit [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 273
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 33/44 (75%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYN 52
+G+ +++L +E K++NKT++LGTSK+NY+DPRI +W N
Sbjct: 201 IGKHEKRLKDVENMLKMKQDNKTVSLGTSKVNYIDPRIVCSWAN 244
>gi|392578649|gb|EIW71777.1| hypothetical protein TREMEDRAFT_43061 [Tremella mesenterica DSM
1558]
Length = 859
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 33/43 (76%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
A+ R+ E++ ++Q D+++ K +AL TSK+NY+DPR++VAW
Sbjct: 784 AITRMDERIATAKIQMGDRDKLKDVALSTSKINYIDPRLTVAW 826
>gi|32264966|gb|AAP78905.1| type IB DNA topoisomerase small subunit [Trypanosoma brucei]
gi|261331302|emb|CBH14292.1| DNA topoisomerase type IB small subunit,putative [Trypanosoma
brucei gambiense DAL972]
Length = 273
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 33/44 (75%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYN 52
+G+ +++L +E K++NKT++LGTSK+NY+DPRI +W N
Sbjct: 201 IGKHEKRLKDVENMLKMKQDNKTVSLGTSKVNYIDPRIVCSWAN 244
>gi|118384307|ref|XP_001025304.1| Eukaryotic DNA topoisomerase I, catalytic core family protein
[Tetrahymena thermophila]
gi|89307071|gb|EAS05059.1| Eukaryotic DNA topoisomerase I, catalytic core family protein
[Tetrahymena thermophila SB210]
Length = 713
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + A+ ++K+++ + + ++ KE+NK IALGTSK NY DPRISV W
Sbjct: 634 EKIQEAIEKIKKKIDEEQNKKQSKEKNKEIALGTSKTNYNDPRISVVW 681
>gi|403221778|dbj|BAM39910.1| DNA topoisomerase I [Theileria orientalis strain Shintoku]
Length = 1028
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
D K L LK++ ++ K+ NKT+ALGTSK+NY+DPRI+VA+
Sbjct: 949 DAAKNKLATLKKKQKDHTIKMRIKDSNKTVALGTSKINYMDPRITVAF 996
>gi|296811446|ref|XP_002846061.1| DNA topoisomerase 1 [Arthroderma otae CBS 113480]
gi|238843449|gb|EEQ33111.1| DNA topoisomerase 1 [Arthroderma otae CBS 113480]
Length = 896
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ ++ +++ + +Q DKE NK +ALGTSKLNY+DPR++V +
Sbjct: 822 ISKIDQRIENMLLQAEDKENNKEVALGTSKLNYIDPRLTVVF 863
>gi|326481179|gb|EGE05189.1| topoisomerase I [Trichophyton equinum CBS 127.97]
Length = 892
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ ++ +++ + +Q DKE NK +ALGTSKLNY+DPR++V +
Sbjct: 818 ISKIDQRIENMLLQAEDKENNKEVALGTSKLNYIDPRLTVVF 859
>gi|315044233|ref|XP_003171492.1| DNA topoisomerase 1 [Arthroderma gypseum CBS 118893]
gi|311343835|gb|EFR03038.1| DNA topoisomerase 1 [Arthroderma gypseum CBS 118893]
Length = 895
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ ++ +++ + +Q DKE NK +ALGTSKLNY+DPR++V +
Sbjct: 821 ISKIDQRIENMLLQAEDKENNKEVALGTSKLNYIDPRLTVVF 862
>gi|302661284|ref|XP_003022311.1| hypothetical protein TRV_03522 [Trichophyton verrucosum HKI 0517]
gi|291186251|gb|EFE41693.1| hypothetical protein TRV_03522 [Trichophyton verrucosum HKI 0517]
Length = 919
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ ++ +++ + +Q DKE NK +ALGTSKLNY+DPR++V +
Sbjct: 845 ISKIDQRIENMLLQAEDKENNKEVALGTSKLNYIDPRLTVVF 886
>gi|327296986|ref|XP_003233187.1| topoisomerase I [Trichophyton rubrum CBS 118892]
gi|326464493|gb|EGD89946.1| topoisomerase I [Trichophyton rubrum CBS 118892]
Length = 892
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ ++ +++ + +Q DKE NK +ALGTSKLNY+DPR++V +
Sbjct: 818 ISKIDQRIENMLLQAEDKENNKEVALGTSKLNYIDPRLTVVF 859
>gi|398398109|ref|XP_003852512.1| DNA topoisomerase 1 [Zymoseptoria tritici IPO323]
gi|339472393|gb|EGP87488.1| hypothetical protein MYCGRDRAFT_100306 [Zymoseptoria tritici
IPO323]
Length = 868
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DK + L +L ++ + +Q D++ NK +ALGTSK+NY+DPR++V +
Sbjct: 788 DKYEKDLEKLDARIATMRLQAEDRDNNKEVALGTSKINYIDPRLTVVF 835
>gi|255712819|ref|XP_002552692.1| KLTH0C10890p [Lachancea thermotolerans]
gi|238934071|emb|CAR22254.1| KLTH0C10890p [Lachancea thermotolerans CBS 6340]
Length = 756
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K + +L +++ +Q DKE+N +ALGTSK+NY+DPR+SV +
Sbjct: 675 AEKLKMQIEKLDQRIETATIQLKDKEDNSQVALGTSKINYIDPRLSVVF 723
>gi|452841954|gb|EME43890.1| hypothetical protein DOTSEDRAFT_71635 [Dothistroma septosporum
NZE10]
Length = 902
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 15/84 (17%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWSGKTKKVI 68
L +L ++ ++ Q D++ NK +ALGTSK+NY+DPR++V ++ FD +
Sbjct: 828 LEKLDTRIATMQTQAEDRDNNKEVALGTSKINYIDPRLTVV-FSKKFD-----------V 875
Query: 69 KVESFNSLPSQAIKRRIDWDLSGL 92
+E F S+ ++ + DW + +
Sbjct: 876 PIERFF---SKTLREKFDWAIKSV 896
>gi|71030242|ref|XP_764763.1| DNA topoisomerase I [Theileria parva strain Muguga]
gi|68351719|gb|EAN32480.1| DNA topoisomerase I, putative [Theileria parva]
Length = 1003
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
LK++ ++ T K+ NKT+ALGTSK+NY+DPRI+VA+
Sbjct: 929 CFAPLKKKQKDHAIKMTIKDSNKTVALGTSKINYMDPRITVAF 971
>gi|168041703|ref|XP_001773330.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675372|gb|EDQ61868.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 632
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ K+++ K+ + K++ KT+ALGTSK+NY+DPRI+VAW
Sbjct: 559 IAATKQKIDKMRLDMRVKDDLKTVALGTSKINYMDPRITVAW 600
>gi|453085697|gb|EMF13740.1| topoisomerase I [Mycosphaerella populorum SO2202]
Length = 898
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 15/84 (17%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWSGKTKKVI 68
+ +L ++ L+ Q D++ NK +ALGTSK+NY+DPR++V ++ FD +
Sbjct: 824 IEKLDTRIATLQTQAEDRDNNKEVALGTSKINYIDPRLTVV-FSKKFD-----------V 871
Query: 69 KVESFNSLPSQAIKRRIDWDLSGL 92
+E F S+ ++ + DW + +
Sbjct: 872 PIERFF---SKTLREKFDWAIKSV 892
>gi|449298971|gb|EMC94985.1| hypothetical protein BAUCODRAFT_34984 [Baudoinia compniacensis UAMH
10762]
Length = 903
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 52/91 (57%), Gaps = 15/91 (16%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWS 61
+K + A+ +L+ ++ +V+ D+E NK +ALGTSK+NY+DPR++V ++ FD
Sbjct: 822 VEKLEAAVEKLEGRIANEKVKGEDRENNKEVALGTSKINYIDPRLTVV-FSKKFD----- 875
Query: 62 GKTKKVIKVESFNSLPSQAIKRRIDWDLSGL 92
+ +E F S+ ++ + DW + +
Sbjct: 876 ------VPIERFF---SKTLREKFDWAIKSV 897
>gi|254579975|ref|XP_002495973.1| ZYRO0C07458p [Zygosaccharomyces rouxii]
gi|238938864|emb|CAR27040.1| ZYRO0C07458p [Zygosaccharomyces rouxii]
Length = 843
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 7/50 (14%)
Query: 8 ALGRLKEQLLKLE-------VQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ +L++Q+ KL+ +Q DKEEN ++LGTSK+NY+DPR+SV +
Sbjct: 761 SIEKLEKQIEKLDQRIETSSIQLRDKEENSQVSLGTSKINYIDPRLSVVF 810
>gi|50551651|ref|XP_503300.1| YALI0D26103p [Yarrowia lipolytica]
gi|49649168|emb|CAG81506.1| YALI0D26103p [Yarrowia lipolytica CLIB122]
Length = 760
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%), Gaps = 7/52 (13%)
Query: 6 KTALGRLKEQLLKLEVQET-------DKEENKTIALGTSKLNYLDPRISVAW 50
K + +L+ Q+ KLE + T DKE+N ++ALGTSK+NY+DPR++V +
Sbjct: 676 KGTVEKLRAQVEKLETRVTTMRMQLKDKEDNSSVALGTSKMNYIDPRLTVKF 727
>gi|358377736|gb|EHK15419.1| hypothetical protein TRIVIDRAFT_37938 [Trichoderma virens Gv29-8]
Length = 914
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 7 TALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
A+ +L E++ E Q D++ NK +AL TSK+NY+DPR++V +
Sbjct: 836 AAIDKLDERIRVFETQAEDRDGNKEVALSTSKINYIDPRLTVVF 879
>gi|396471361|ref|XP_003838854.1| similar to DNA topoisomerase 1 [Leptosphaeria maculans JN3]
gi|312215423|emb|CBX95375.1| similar to DNA topoisomerase 1 [Leptosphaeria maculans JN3]
Length = 1025
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 32/40 (80%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ +++ +++Q DKE NK +ALGTSK+NY+DPR++V +
Sbjct: 953 KIMQRIETMKIQMEDKEGNKEVALGTSKINYIDPRLTVVF 992
>gi|156844437|ref|XP_001645281.1| hypothetical protein Kpol_1037p19 [Vanderwaltozyma polyspora DSM
70294]
gi|156115941|gb|EDO17423.1| hypothetical protein Kpol_1037p19 [Vanderwaltozyma polyspora DSM
70294]
Length = 799
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +L++++ +Q DKEEN ++LGTSK+NY+DPR+SV +
Sbjct: 725 IEKLEQRIQTSSIQLKDKEENSQVSLGTSKINYIDPRLSVVF 766
>gi|389584228|dbj|GAB66961.1| topoisomerase I [Plasmodium cynomolgi strain B]
Length = 975
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 29/33 (87%)
Query: 18 KLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+L+ Q +++NKTIALGTSK+NY+DPRI+VA+
Sbjct: 910 QLKHQMKVRDDNKTIALGTSKINYMDPRITVAF 942
>gi|221057147|ref|XP_002259711.1| topoisomerase I [Plasmodium knowlesi strain H]
gi|193809783|emb|CAQ40487.1| topoisomerase I, putative [Plasmodium knowlesi strain H]
Length = 924
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 29/33 (87%)
Query: 18 KLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+L+ Q +++NKTIALGTSK+NY+DPRI+VA+
Sbjct: 860 QLKHQMKVRDDNKTIALGTSKINYMDPRITVAF 892
>gi|156094480|ref|XP_001613277.1| topoisomerase I [Plasmodium vivax Sal-1]
gi|148802151|gb|EDL43550.1| topoisomerase I, putative [Plasmodium vivax]
Length = 931
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 29/33 (87%)
Query: 18 KLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+L+ Q +++NKTIALGTSK+NY+DPRI+VA+
Sbjct: 867 QLKHQMKVRDDNKTIALGTSKINYMDPRITVAF 899
>gi|363750300|ref|XP_003645367.1| hypothetical protein Ecym_3036 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889001|gb|AET38550.1| Hypothetical protein Ecym_3036 [Eremothecium cymbalariae
DBVPG#7215]
Length = 660
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD 56
+K K + +L++++ +Q DKE+N T+AL TSK++Y+DPR+SV + YN+ +
Sbjct: 579 VEKLKAQVEKLEQRIATSSIQLKDKEDNSTVALSTSKISYIDPRLSVVFCKKYNVPLE 636
>gi|407844249|gb|EKG01874.1| hypothetical protein TCSYLVIO_007117 [Trypanosoma cruzi]
Length = 263
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNL 53
AL R +E+L + E K++NK ++LGTSK+NY+DPRI +W YN+
Sbjct: 190 ALQRYEERLNREENMIRIKDDNKAVSLGTSKVNYIDPRIVCSWAKEYNV 238
>gi|340056113|emb|CCC50442.1| putative DNA topoisomerase type IB small subunit (PMID:12810956)
[Trypanosoma vivax Y486]
Length = 277
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 6 KTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ A+ R +E+L + E K++NKT++LGTSK+NY+DPRI +W
Sbjct: 202 EAAVRRYEERLNREENMIRIKDDNKTVSLGTSKINYIDPRIVCSW 246
>gi|330921713|ref|XP_003299539.1| hypothetical protein PTT_10547 [Pyrenophora teres f. teres 0-1]
gi|311326764|gb|EFQ92378.1| hypothetical protein PTT_10547 [Pyrenophora teres f. teres 0-1]
Length = 905
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 32/40 (80%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ +++ +++Q DKE NK +ALGTSK+NY+DPR++V +
Sbjct: 833 KIVQRIENMKIQMEDKEGNKEVALGTSKINYIDPRLTVVF 872
>gi|189203219|ref|XP_001937945.1| DNA topoisomerase 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187985044|gb|EDU50532.1| DNA topoisomerase 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 905
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 32/40 (80%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ +++ +++Q DKE NK +ALGTSK+NY+DPR++V +
Sbjct: 833 KIVQRIENMKIQMEDKEGNKEVALGTSKINYIDPRLTVVF 872
>gi|55793347|gb|AAV65714.1| type IB topoisomerase small subunit [Trypanosoma cruzi]
Length = 271
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNL 53
AL R +E+L + E K++NK ++LGTSK+NY+DPRI +W YN+
Sbjct: 198 ALQRYEERLNREENMIRIKDDNKAVSLGTSKVNYIDPRIVCSWAKEYNV 246
>gi|154309521|ref|XP_001554094.1| hypothetical protein BC1G_07231 [Botryotinia fuckeliana B05.10]
Length = 912
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DK + + ++ E++ + ++ D+E NK +ALGTSK+NY+DPR++V +
Sbjct: 829 VDKFEANITKIDERIANMLLKREDREGNKEVALGTSKINYIDPRLTVVF 877
>gi|407402955|gb|EKF29331.1| hypothetical protein MOQ_006892 [Trypanosoma cruzi marinkellei]
Length = 267
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNL 53
AL R +E+L + E K++NK ++LGTSK+NY+DPRI +W YN+
Sbjct: 194 ALQRYEERLNREENMIRIKDDNKAVSLGTSKVNYIDPRIVCSWAKEYNV 242
>gi|347838289|emb|CCD52861.1| similar to DNA topoisomerase I [Botryotinia fuckeliana]
Length = 896
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
DK + + ++ E++ + ++ D+E NK +ALGTSK+NY+DPR++V +
Sbjct: 813 VDKFEANITKIDERIANMLLKREDREGNKEVALGTSKINYIDPRLTVVF 861
>gi|71661924|ref|XP_817976.1| DNA topoisomerase type IB small subunit [Trypanosoma cruzi strain
CL Brener]
gi|70883200|gb|EAN96125.1| DNA topoisomerase type IB small subunit, putative [Trypanosoma
cruzi]
Length = 272
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNL 53
AL R +E+L + E K++NK ++LGTSK+NY+DPRI +W YN+
Sbjct: 199 ALQRYEERLNREENMIRIKDDNKAVSLGTSKVNYIDPRIVCSWAKEYNV 247
>gi|124506131|ref|XP_001351663.1| topoisomerase I [Plasmodium falciparum 3D7]
gi|790482|emb|CAA58716.1| topoisomerase I [Plasmodium falciparum]
gi|23504591|emb|CAD51470.1| topoisomerase I [Plasmodium falciparum 3D7]
Length = 839
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 25/25 (100%)
Query: 26 KEENKTIALGTSKLNYLDPRISVAW 50
+++NKTIALGTSK+NY+DPRI+VA+
Sbjct: 783 RDDNKTIALGTSKINYMDPRITVAF 807
>gi|399217729|emb|CCF74616.1| unnamed protein product [Babesia microti strain RI]
Length = 706
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 33/39 (84%)
Query: 12 LKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K+ + KL+++ ++NKT+ALGTSK+NY+DPRI++A+
Sbjct: 652 IKKNISKLKLKIKIHDDNKTVALGTSKINYMDPRITIAF 690
>gi|393245001|gb|EJD52512.1| hypothetical protein AURDEDRAFT_111181 [Auricularia delicata
TFB-10046 SS5]
Length = 908
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
D + A+ ++ ++ + ++ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 828 ADALENAIEKMDAKIKAFRITMNVRDTTKTVALGTSKINYLDPRITVAW 876
>gi|302805168|ref|XP_002984335.1| hypothetical protein SELMODRAFT_120288 [Selaginella
moellendorffii]
gi|300147723|gb|EFJ14385.1| hypothetical protein SELMODRAFT_120288 [Selaginella
moellendorffii]
Length = 68
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 17 LKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
LK+ + + KE+ KT+ALGTSK+NY+DP I+VAW
Sbjct: 1 LKMTLDLSVKEDLKTVALGTSKINYMDPPITVAW 34
>gi|302773463|ref|XP_002970149.1| hypothetical protein SELMODRAFT_410935 [Selaginella moellendorffii]
gi|300162660|gb|EFJ29273.1| hypothetical protein SELMODRAFT_410935 [Selaginella moellendorffii]
Length = 163
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 17/102 (16%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWS 61
T++ + L + ++ K+ + + KE+ KT+ALGTSK+ Y+DPRI+VAW
Sbjct: 72 TEQLEKKLAQTDARIAKMTLDLSVKEDLKTVALGTSKIKYMDPRITVAWCK--------- 122
Query: 62 GKTKKVIKVES-FNSLPSQAIKRRIDWDLSGLPNTRIANLSG 102
+ I +E FN +++ + W ++ PN R G
Sbjct: 123 ---RHEIPIEKVFN----KSLLAKFPWAMNVEPNFRFCEADG 157
>gi|2501243|sp|Q00313.1|TOP1_CANAL RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I
gi|1465731|gb|AAC49381.1| topoisomerase type I [Candida albicans]
Length = 778
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFD 56
+K K + L+ ++L + +Q DKE+N ++LGTSK+NY+DPR+ + ++ FD
Sbjct: 697 VEKLKQQIETLENRILNVSIQLKDKEDNSEVSLGTSKMNYIDPRL-IVMFSKKFD 750
>gi|429858314|gb|ELA33139.1| topoisomerase i [Colletotrichum gloeosporioides Nara gc5]
Length = 879
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ ++ E++ LE+Q D++ NK +AL TSK+NY+DPR++V +
Sbjct: 804 VKKIDERIKALELQAADRDGNKEVALSTSKINYIDPRLTVVF 845
>gi|68483489|ref|XP_714305.1| likely DNA topoisomerase I [Candida albicans SC5314]
gi|46435860|gb|EAK95233.1| likely DNA topoisomerase I [Candida albicans SC5314]
Length = 780
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFD 56
+K K + L+ ++L + +Q DKE+N ++LGTSK+NY+DPR+ + ++ FD
Sbjct: 699 VEKLKQQIETLENKILNVSIQLKDKEDNSEVSLGTSKMNYIDPRL-IVMFSKKFD 752
>gi|1762119|gb|AAB39507.1| topoisomerase I [Candida albicans]
Length = 780
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFD 56
+K K + L+ ++L + +Q DKE+N ++LGTSK+NY+DPR+ + ++ FD
Sbjct: 699 VEKLKQQIETLENKILNVSIQLKDKEDNSEVSLGTSKMNYIDPRL-IVMFSKKFD 752
>gi|68484053|ref|XP_714029.1| likely DNA topoisomerase I [Candida albicans SC5314]
gi|46435553|gb|EAK94932.1| likely DNA topoisomerase I [Candida albicans SC5314]
Length = 780
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFD 56
+K K + L+ ++L + +Q DKE+N ++LGTSK+NY+DPR+ + ++ FD
Sbjct: 699 VEKLKQQIETLENKILNVSIQLKDKEDNSEVSLGTSKMNYIDPRL-IVMFSKKFD 752
>gi|367017033|ref|XP_003683015.1| hypothetical protein TDEL_0G04370 [Torulaspora delbrueckii]
gi|359750678|emb|CCE93804.1| hypothetical protein TDEL_0G04370 [Torulaspora delbrueckii]
Length = 760
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +L +++ +Q DKEEN ++LGTSK+NY+DPR+SV +
Sbjct: 686 IEKLDQRIQNSAIQLRDKEENSQVSLGTSKINYIDPRLSVVF 727
>gi|260947406|ref|XP_002618000.1| hypothetical protein CLUG_01459 [Clavispora lusitaniae ATCC 42720]
gi|238847872|gb|EEQ37336.1| hypothetical protein CLUG_01459 [Clavispora lusitaniae ATCC 42720]
Length = 764
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K + +++ ++L Q DKE+N ++LGTSKLNY+DPR++V +
Sbjct: 683 VEKLKVQIEKIENRILNTNFQLKDKEDNSEVSLGTSKLNYIDPRLTVMF 731
>gi|241956336|ref|XP_002420888.1| DNA topoisomerase, putative [Candida dubliniensis CD36]
gi|223644231|emb|CAX41041.1| DNA topoisomerase, putative [Candida dubliniensis CD36]
Length = 777
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K + L+ ++L + Q DKE+N ++LGTSK+NY+DPR++V +
Sbjct: 696 VEKLKQQIETLENRILNVSFQLKDKEDNSEVSLGTSKMNYIDPRLTVMF 744
>gi|367005136|ref|XP_003687300.1| hypothetical protein TPHA_0J00430 [Tetrapisispora phaffii CBS 4417]
gi|357525604|emb|CCE64866.1| hypothetical protein TPHA_0J00430 [Tetrapisispora phaffii CBS 4417]
Length = 787
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + L +LK ++ +Q D+EEN ++LGTSK+NY+DPR+SV +
Sbjct: 706 VEKIEKQLEKLKLRIETSSIQLKDREENSQVSLGTSKINYIDPRLSVVF 754
>gi|451927077|gb|AGF84955.1| topoisomerase 1b [Moumouvirus goulette]
Length = 542
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Query: 4 KKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD 56
K + + RL+ + KL+ + K E K I+LGTSK+NY+DPRI+VA+ +NL D
Sbjct: 464 KNQQTIERLENNVKKLKSKRALKTELKNISLGTSKINYIDPRITVAFMKRHNLPID 519
>gi|317447687|emb|CBK00915.1| topoisomerase 1 [Albonectria rigidiuscula]
Length = 482
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
A +L +++ L+ Q D++ NK +ALGTSK+NY+DPR++V +
Sbjct: 423 AXEKLDDRIKTLKTQAEDRDGNKEVALGTSKINYIDPRLTVVF 465
>gi|190347829|gb|EDK40177.2| hypothetical protein PGUG_04275 [Meyerozyma guilliermondii ATCC
6260]
Length = 754
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 7/54 (12%)
Query: 4 KKKTALGRLKEQLLKLE-------VQETDKEENKTIALGTSKLNYLDPRISVAW 50
K T + +LK Q+ KL+ Q DKE+N ++LGTSKLNY+DPR++V +
Sbjct: 668 KSTTTVEKLKAQVEKLDGRIVNTTFQLQDKEDNSEVSLGTSKLNYIDPRLTVMF 721
>gi|407929552|gb|EKG22369.1| DNA topoisomerase I [Macrophomina phaseolina MS6]
Length = 854
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 36/48 (75%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K ++ + +L++++ +Q DK+ NK +ALGTSK+NY+DPR++V +
Sbjct: 774 EKLESKVEQLQQRIETATIQMEDKDNNKEVALGTSKINYIDPRLTVVF 821
>gi|168041204|ref|XP_001773082.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675629|gb|EDQ62122.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 502
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 30/37 (81%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+++ K+ + K++ KT+ALGTSK+NY+DPRI+VAW
Sbjct: 434 QKIDKMRLDMRVKDDLKTVALGTSKINYMDPRITVAW 470
>gi|146415152|ref|XP_001483546.1| hypothetical protein PGUG_04275 [Meyerozyma guilliermondii ATCC
6260]
Length = 754
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 7/54 (12%)
Query: 4 KKKTALGRLKEQLLKLE-------VQETDKEENKTIALGTSKLNYLDPRISVAW 50
K T + +LK Q+ KL+ Q DKE+N ++LGTSKLNY+DPR++V +
Sbjct: 668 KSTTTVEKLKAQVEKLDGRIVNTTFQLQDKEDNSEVSLGTSKLNYIDPRLTVMF 721
>gi|361069015|gb|AEW08819.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
Length = 54
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 21/21 (100%)
Query: 30 KTIALGTSKLNYLDPRISVAW 50
KT+ALGTSK+NYLDPRISVAW
Sbjct: 2 KTVALGTSKINYLDPRISVAW 22
>gi|361069013|gb|AEW08818.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159616|gb|AFG62270.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159618|gb|AFG62271.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159620|gb|AFG62272.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159622|gb|AFG62273.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159624|gb|AFG62274.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159626|gb|AFG62275.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159628|gb|AFG62276.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159630|gb|AFG62277.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159632|gb|AFG62278.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159634|gb|AFG62279.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159636|gb|AFG62280.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159638|gb|AFG62281.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159640|gb|AFG62282.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159642|gb|AFG62283.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159644|gb|AFG62284.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159646|gb|AFG62285.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159648|gb|AFG62286.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
gi|383159650|gb|AFG62287.1| Pinus taeda anonymous locus CL1794Contig1_03 genomic sequence
Length = 54
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 21/21 (100%)
Query: 30 KTIALGTSKLNYLDPRISVAW 50
KT+ALGTSK+NYLDPRISVAW
Sbjct: 2 KTVALGTSKINYLDPRISVAW 22
>gi|340520224|gb|EGR50461.1| predicted protein [Trichoderma reesei QM6a]
Length = 914
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 7 TALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ ++ E++ LE Q D++ NK +AL TSK+NY+DPR++V +
Sbjct: 836 ASIDKIDERIRILETQAEDRDGNKEVALSTSKINYIDPRLTVVF 879
>gi|400602504|gb|EJP70106.1| topoisomerase I [Beauveria bassiana ARSEF 2860]
Length = 901
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 26/32 (81%)
Query: 19 LEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
LE Q D++ NK +ALGTSK+NY+DPR++V +
Sbjct: 835 LETQAEDRDGNKEVALGTSKINYIDPRLTVVF 866
>gi|149236013|ref|XP_001523884.1| DNA topoisomerase I [Lodderomyces elongisporus NRRL YB-4239]
gi|146452260|gb|EDK46516.1| DNA topoisomerase I [Lodderomyces elongisporus NRRL YB-4239]
Length = 849
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 35/49 (71%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K KT + ++ +++ +Q DKE+N ++LGTSK+NY+DPR++V +
Sbjct: 768 VEKLKTQVENMENRIVSTTLQLKDKEDNSEVSLGTSKMNYIDPRLTVMF 816
>gi|2330649|emb|CAA74890.1| topoisomerase I [Pisum sativum]
Length = 892
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/21 (85%), Positives = 21/21 (100%)
Query: 30 KTIALGTSKLNYLDPRISVAW 50
KT+ALGTSK+NYLDPRI+VAW
Sbjct: 835 KTVALGTSKINYLDPRITVAW 855
>gi|398009743|ref|XP_003858070.1| DNA topoisomerase type IB small subunit [Leishmania donovani]
gi|322496275|emb|CBZ31346.1| DNA topoisomerase type IB small subunit [Leishmania donovani]
Length = 262
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
AL R +E+L + E K++NK ++LGTSK+NY+DPRI +W
Sbjct: 189 ALERYRERLNREESIIRIKDDNKAVSLGTSKINYIDPRIICSW 231
>gi|361131992|gb|EHL03607.1| putative DNA topoisomerase 1 [Glarea lozoyensis 74030]
Length = 906
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
Q+ + +Q D+E NK +ALGTSK+NY+DPR++V +
Sbjct: 836 QISNMMLQAEDREGNKEVALGTSKINYIDPRLTVVF 871
>gi|444320461|ref|XP_004180887.1| hypothetical protein TBLA_0E03140 [Tetrapisispora blattae CBS 6284]
gi|387513930|emb|CCH61368.1| hypothetical protein TBLA_0E03140 [Tetrapisispora blattae CBS 6284]
Length = 879
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 7/50 (14%)
Query: 8 ALGRLKEQLLKLE-------VQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +L+ Q+ K E VQ DKE+N ++LGTSKLNY+DPR++V +
Sbjct: 797 TVEKLRAQIEKFENRIQTRSVQLKDKEDNSQVSLGTSKLNYIDPRLTVVF 846
>gi|430814640|emb|CCJ28154.1| unnamed protein product [Pneumocystis jirovecii]
Length = 870
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 4/46 (8%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYL----DPRISVAW 50
+ ++ E++ ++ DK+ENKT ALGTSK+NY+ DPR++ AW
Sbjct: 793 IEKINERIRNMKAMMIDKDENKTTALGTSKINYMFLYSDPRLTYAW 838
>gi|34365062|emb|CAE45727.1| DNA topoisomerase I subunit B [Leishmania panamensis]
Length = 269
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
AL R +E+L + E K++NK ++LGTSK+NY+DPRI +W
Sbjct: 196 ALVRYRERLNREENVIRIKDDNKAVSLGTSKINYIDPRIVCSW 238
>gi|154331758|ref|XP_001561696.1| DNA topoisomerase type IB small subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059016|emb|CAM41488.1| DNA topoisomerase type IB small subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 269
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
AL R +E+L + E K++NK ++LGTSK+NY+DPRI +W
Sbjct: 196 ALVRYRERLNREENVIRIKDDNKAVSLGTSKINYIDPRIVCSW 238
>gi|408403066|ref|YP_006861049.1| DNA topoisomerase IB [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408363662|gb|AFU57392.1| DNA topoisomerase IB [Candidatus Nitrososphaera gargensis Ga9.2]
Length = 549
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYN 52
RLKE+L K+EVQ ++E + LGTS NY+DPR+ AW N
Sbjct: 470 RLKERLEKIEVQLKLQQETRDYNLGTSLRNYIDPRVMKAWLN 511
>gi|156045655|ref|XP_001589383.1| hypothetical protein SS1G_10018 [Sclerotinia sclerotiorum 1980]
gi|154694411|gb|EDN94149.1| hypothetical protein SS1G_10018 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 911
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 32/42 (76%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ ++ E++ + ++ D+E NK +ALGTSK+NY+DPR++V +
Sbjct: 835 ITKIDERIANMLLKREDREGNKEVALGTSKINYIDPRLTVVF 876
>gi|300521520|gb|ADK25971.1| topoisomerase IB [Candidatus Nitrososphaera gargensis]
Length = 558
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYN 52
RLKE+L K+EVQ ++E + LGTS NY+DPR+ AW N
Sbjct: 479 RLKERLEKIEVQLKLQQETRDYNLGTSLRNYIDPRVMKAWLN 520
>gi|145530640|ref|XP_001451092.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418736|emb|CAK83695.1| unnamed protein product [Paramecium tetraurelia]
Length = 596
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 22/25 (88%)
Query: 26 KEENKTIALGTSKLNYLDPRISVAW 50
KEENK IALGTSK NY DPRISVA+
Sbjct: 540 KEENKEIALGTSKTNYNDPRISVAF 564
>gi|366992774|ref|XP_003676152.1| hypothetical protein NCAS_0D02090 [Naumovozyma castellii CBS 4309]
gi|342302018|emb|CCC69790.1| hypothetical protein NCAS_0D02090 [Naumovozyma castellii CBS 4309]
Length = 753
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + + RL ++ +Q DKEEN ++LGTSK+NY+DPR++V +
Sbjct: 672 VEKIEKQIERLDNRIQTNSIQLKDKEENSQVSLGTSKINYIDPRLTVVF 720
>gi|294658456|ref|XP_460799.2| DEHA2F09988p [Debaryomyces hansenii CBS767]
gi|202953144|emb|CAG89140.2| DEHA2F09988p [Debaryomyces hansenii CBS767]
Length = 789
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 3 DKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K+ + L ++L Q DKE+N ++LGTSK+NY+DPR++V +
Sbjct: 709 EKLKSQVDTLTNRILNTTFQLKDKEDNSEVSLGTSKMNYIDPRLTVMF 756
>gi|17528932|gb|AAL38667.1| DNA topoisomerase I-like protein [Leishmania donovani]
gi|158957561|gb|ABW86320.1| small subunit of topoisomerase IB TOP1S [Leishmania donovani]
Length = 262
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
AL R +E+L + E K++NK ++LGTSK+NY+DPRI +W
Sbjct: 189 ALERYRERLNREENIIRIKDDNKAVSLGTSKINYIDPRIICSW 231
>gi|76363611|ref|XP_888517.1| DNA topoisomerase type IB small subunit [Leishmania major strain
Friedlin]
gi|15027093|emb|CAC44914.1| DNA topoisomerase type IB small subunit [Leishmania major strain
Friedlin]
gi|68164749|gb|AAY87403.1| topoisomerase I subunit B [Leishmania major]
Length = 262
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
AL R +E+L + E K++NK ++LGTSK+NY+DPRI +W
Sbjct: 189 ALERYRERLNREENIIRIKDDNKAVSLGTSKINYIDPRIICSW 231
>gi|146076124|ref|XP_001462844.1| DNA topoisomerase type IB small subunit [Leishmania infantum JPCM5]
gi|134066925|emb|CAM65030.1| DNA topoisomerase type IB small subunit [Leishmania infantum JPCM5]
Length = 262
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
AL R +E+L + E K++NK ++LGTSK+NY+DPRI +W
Sbjct: 189 ALERYRERLNREENIIRIKDDNKAVSLGTSKINYIDPRIICSW 231
>gi|343477090|emb|CCD11997.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 238
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 6 KTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ L R +++L + E K++NKT++LGTSK+NY+DPRI +W
Sbjct: 163 EATLKRYEDRLNREENMIRIKDDNKTVSLGTSKVNYIDPRIVCSW 207
>gi|440911948|gb|ELR61565.1| DNA topoisomerase I, mitochondrial [Bos grunniens mutus]
Length = 1021
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 18 KLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ Q TDK+E+K +ALGTS+L LDPRI V W
Sbjct: 931 RVSTQATDKKESKQVALGTSELICLDPRIGVTW 963
>gi|401414556|ref|XP_003871775.1| DNA topoisomerase type IB small subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487995|emb|CBZ23240.1| DNA topoisomerase type IB small subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 262
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
AL R +E+L + E K++NK ++LGTSK+NY+DPRI +W
Sbjct: 189 ALVRYRERLNREENIIRIKDDNKAVSLGTSKINYIDPRIICSW 231
>gi|428170450|gb|EKX39375.1| DNA topoisomerase I [Guillardia theta CCMP2712]
Length = 701
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 6 KTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
K + L+E++ K E Q+ K + +AL TSK+NYLDPRI+VAW
Sbjct: 623 KKKIANLEERISKQETQKQIKLKLAGVALSTSKVNYLDPRITVAW 667
>gi|449017694|dbj|BAM81096.1| DNA topoisomerase [Cyanidioschyzon merolae strain 10D]
Length = 706
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 8 ALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + +E++ +LE ++ T++L TSK+NYLDPRI+VAW
Sbjct: 617 GIAQTQEKIRRLEADLKTRDSLATVSLSTSKINYLDPRITVAW 659
>gi|310790996|gb|EFQ26529.1| eukaryotic DNA topoisomerase I [Glomerella graminicola M1.001]
Length = 907
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 7/50 (14%)
Query: 8 ALGRLKEQLLK-------LEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ +L EQ+ K LE+Q D++ NK +AL TSK+NY+DPR++V +
Sbjct: 824 SIEKLDEQVKKFDDRVKTLELQAADRDGNKEVALSTSKINYIDPRLTVVF 873
>gi|380495631|emb|CCF32247.1| eukaryotic DNA topoisomerase I [Colletotrichum higginsianum]
Length = 918
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 7/50 (14%)
Query: 8 ALGRLKEQLLK-------LEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ +L EQ+ K LE+Q D++ NK +AL TSK+NY+DPR++V +
Sbjct: 835 SVEKLDEQVKKFDDRVKTLELQAADRDGNKEVALSTSKINYIDPRLTVVF 884
>gi|406606704|emb|CCH41928.1| DNA topoisomerase I [Wickerhamomyces ciferrii]
Length = 773
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 34/49 (69%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K + + +L++++ +Q DKE+N ++L TSK+NY+DPR+SV +
Sbjct: 692 VEKLEAQVEKLEQRITNTSIQMKDKEDNSEVSLSTSKINYIDPRLSVVF 740
>gi|334683319|dbj|BAK32961.1| topoisomerase I [Ophiorrhiza ridleyana]
Length = 926
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + ++ K+E + KE+ K +AL TSK++YLDPRI+VAW
Sbjct: 853 IAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAW 894
>gi|187369227|dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
Length = 926
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + ++ K+E + KE+ K +AL TSK++YLDPRI+VAW
Sbjct: 853 IAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAW 894
>gi|334683309|dbj|BAK32956.1| topoisomerase I [Ophiorrhiza fucosa]
Length = 926
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + ++ K+E + KE+ K +AL TSK++YLDPRI+VAW
Sbjct: 853 IAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAW 894
>gi|187369225|dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
Length = 926
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + ++ K+E + KE+ K +AL TSK++YLDPRI+VAW
Sbjct: 853 IAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAW 894
>gi|334683323|dbj|BAK32963.1| topoisomerase I [Ophiorrhiza sp. 35]
Length = 920
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + ++ K+E + KE+ K +AL TSK++YLDPRI+VAW
Sbjct: 853 IAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAW 894
>gi|334683311|dbj|BAK32957.1| topoisomerase I [Ophiorrhiza harrisiana]
Length = 920
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + ++ K+E + KE+ K +AL TSK++YLDPRI+VAW
Sbjct: 853 IAQTNAKIEKMERDKKTKEDLKAVALSTSKISYLDPRITVAW 894
>gi|403169465|ref|XP_003328910.2| hypothetical protein PGTG_10211 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167970|gb|EFP84491.2| hypothetical protein PGTG_10211 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 973
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+G +++L + + D++E K +LGTSK NY+DPR+S AW
Sbjct: 900 IGNFDKEILIAKSLQKDRDEGKETSLGTSKTNYIDPRLSFAW 941
>gi|255727468|ref|XP_002548660.1| DNA topoisomerase I [Candida tropicalis MYA-3404]
gi|240134584|gb|EER34139.1| DNA topoisomerase I [Candida tropicalis MYA-3404]
Length = 777
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K K + L+ ++L Q DKE+N ++LGTSK+NY+DPR++V +
Sbjct: 696 VEKLKGQIETLENRILTTSFQLKDKEDNSEVSLGTSKMNYIDPRLTVMF 744
>gi|448534130|ref|XP_003870756.1| Top1 DNA topoisomerase I [Candida orthopsilosis Co 90-125]
gi|380355111|emb|CCG24628.1| Top1 DNA topoisomerase I [Candida orthopsilosis]
Length = 805
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 30/39 (76%)
Query: 12 LKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
L+ +++ +Q DKE+N ++LGTSK+NY+DPR++V +
Sbjct: 734 LENRIVATSLQLKDKEDNSEVSLGTSKMNYIDPRLTVMF 772
>gi|353239886|emb|CCA71779.1| probable TOP1-DNA topoisomerase I [Piriformospora indica DSM 11827]
Length = 905
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 11/50 (22%)
Query: 14 EQLLKL-----------EVQETDKEENKTIALGTSKLNYLDPRISVAWYN 52
EQL+K+ +++++DKE KTI+L TSK+NYLDPRI+ A+ +
Sbjct: 826 EQLVKMIEKQSDIISKNKLKQSDKESLKTISLTTSKINYLDPRITAAYCD 875
>gi|430732209|gb|AGA55505.1| topoisomerase, partial [Carabus problematicus]
Length = 180
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 25/26 (96%)
Query: 13 KEQLLKLEVQETDKEENKTIALGTSK 38
++QL++L VQETDK+ENK+IALGTSK
Sbjct: 155 RDQLVRLNVQETDKDENKSIALGTSK 180
>gi|344299987|gb|EGW30327.1| hypothetical protein SPAPADRAFT_142998 [Spathaspora passalidarum
NRRL Y-27907]
Length = 781
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 7/54 (12%)
Query: 4 KKKTALGRLKEQLLKLE-------VQETDKEENKTIALGTSKLNYLDPRISVAW 50
K + +LK+Q+ +E +Q DKE+N ++LGTSK+NY+DPR++V +
Sbjct: 695 KSNMTVEKLKQQVETIEARYVTTSLQLKDKEDNSEVSLGTSKMNYIDPRLTVMF 748
>gi|213402109|ref|XP_002171827.1| DNA topoisomerase I [Schizosaccharomyces japonicus yFS275]
gi|211999874|gb|EEB05534.1| DNA topoisomerase I [Schizosaccharomyces japonicus yFS275]
Length = 654
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 23/25 (92%)
Query: 25 DKEENKTIALGTSKLNYLDPRISVA 49
DK+ENKT ALGTSK+NY+DPR++ +
Sbjct: 597 DKDENKTTALGTSKINYIDPRLTFS 621
>gi|358415316|ref|XP_003583073.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase I, mitochondrial
[Bos taurus]
gi|359072172|ref|XP_003586922.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase I, mitochondrial
[Bos taurus]
Length = 725
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 18 KLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
++ Q TDKE +K +ALGTS+L LDPRI V W
Sbjct: 661 RVSTQATDKEGSKQVALGTSELICLDPRIGVTW 693
>gi|150865726|ref|XP_001385059.2| DNA topoisomerase I [Scheffersomyces stipitis CBS 6054]
gi|149386982|gb|ABN67030.2| DNA topoisomerase I [Scheffersomyces stipitis CBS 6054]
Length = 780
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 7/54 (12%)
Query: 4 KKKTALGRLKEQLLKLE-------VQETDKEENKTIALGTSKLNYLDPRISVAW 50
KK + +L++Q+ +E +Q DKE+N ++LGTSK+NY+DPR++V +
Sbjct: 694 KKNLTVEKLQQQVEVIENRIVTTTLQLKDKEDNSEVSLGTSKMNYIDPRLTVMF 747
>gi|164660612|ref|XP_001731429.1| hypothetical protein MGL_1612 [Malassezia globosa CBS 7966]
gi|159105329|gb|EDP44215.1| hypothetical protein MGL_1612 [Malassezia globosa CBS 7966]
Length = 877
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
E + K E + +K ++LGTSK+NY+DPRI+VAW
Sbjct: 741 EAIKKQEAELLNKNNTSDVSLGTSKMNYIDPRITVAW 777
>gi|328858386|gb|EGG07499.1| hypothetical protein MELLADRAFT_116253 [Melampsora larici-populina
98AG31]
Length = 937
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 25 DKEENKTIALGTSKLNYLDPRISVAW 50
DK+E K +LGTSK+NY+DPR++ AW
Sbjct: 880 DKDEGKETSLGTSKMNYIDPRLTYAW 905
>gi|320582441|gb|EFW96658.1| DNA topoisomerase, putative [Ogataea parapolymorpha DL-1]
Length = 761
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 7/49 (14%)
Query: 9 LGRLKEQLLKLE-------VQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ +L++Q+ K+E +Q DKE+N +AL TSK+NY+DPR++V +
Sbjct: 680 VEKLQQQVEKIETRIKNTSLQLKDKEDNSQVALNTSKINYIDPRLTVMF 728
>gi|354543170|emb|CCE39888.1| hypothetical protein CPAR2_603070 [Candida parapsilosis]
Length = 821
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 15 QLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+++ +Q DKE+N ++LGTSK+NY+DPR++V +
Sbjct: 753 RIVATSLQLKDKEDNSEVSLGTSKMNYIDPRLTVMF 788
>gi|413953606|gb|AFW86255.1| putative NAC domain transcription factor superfamily protein,
partial [Zea mays]
Length = 181
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 19 LEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+E+ + KE+ K +ALGTSK+NY D RI+VAW
Sbjct: 1 MEMNKKIKEDLKAVALGTSKVNYFDSRITVAW 32
>gi|448089584|ref|XP_004196847.1| Piso0_004073 [Millerozyma farinosa CBS 7064]
gi|448093884|ref|XP_004197878.1| Piso0_004073 [Millerozyma farinosa CBS 7064]
gi|359378269|emb|CCE84528.1| Piso0_004073 [Millerozyma farinosa CBS 7064]
gi|359379300|emb|CCE83497.1| Piso0_004073 [Millerozyma farinosa CBS 7064]
Length = 774
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Query: 4 KKKTALGRLKEQLLKLE-------VQETDKEENKTIALGTSKLNYLDPRISVAW 50
KK + +LK Q+ LE Q DKE+N ++L TSK+NY+DPR++V +
Sbjct: 688 KKSATVEKLKTQVETLENRITNTTFQLKDKEDNSEVSLSTSKINYIDPRLTVVF 741
>gi|291001795|ref|XP_002683464.1| predicted protein [Naegleria gruberi]
gi|284097093|gb|EFC50720.1| predicted protein [Naegleria gruberi]
Length = 568
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 12 LKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+K+++ L+ ++ K ENKT++L TS+ NY DPRI++AW
Sbjct: 498 IKKKIDDLKQEKKMKIENKTVSLTTSRTNYCDPRITIAW 536
>gi|254570697|ref|XP_002492458.1| Topoisomerase I [Komagataella pastoris GS115]
gi|238032256|emb|CAY70271.1| Topoisomerase I [Komagataella pastoris GS115]
Length = 763
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 25 DKEENKTIALGTSKLNYLDPRISVAW 50
DKE+N +ALGTSKLNY+DPR++ +
Sbjct: 705 DKEDNSQVALGTSKLNYIDPRLTAMF 730
>gi|88192408|pdb|2B9S|B Chain B, Crystal Structure Of Heterodimeric L. Donovani
Topoisomerase I-Vanadate-Dna Complex
Length = 62
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 22/25 (88%)
Query: 26 KEENKTIALGTSKLNYLDPRISVAW 50
K++NK ++LGTSK+NY+DPRI +W
Sbjct: 7 KDDNKAVSLGTSKINYIDPRIICSW 31
>gi|328353528|emb|CCA39926.1| DNA topoisomerase I [Komagataella pastoris CBS 7435]
Length = 625
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 25 DKEENKTIALGTSKLNYLDPRISVAW 50
DKE+N +ALGTSKLNY+DPR++ +
Sbjct: 567 DKEDNSQVALGTSKLNYIDPRLTAMF 592
>gi|343428751|emb|CBQ72296.1| DNA topoisomerase I [Sporisorium reilianum SRZ2]
Length = 1033
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
E + K E + +K +AL TSKLNY+DPRI++AW
Sbjct: 807 EMIRKQEAELVNKNNTSDVALSTSKLNYIDPRITLAW 843
>gi|430732183|gb|AGA55492.1| topoisomerase, partial [Carabus problematicus]
Length = 189
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 24/25 (96%)
Query: 13 KEQLLKLEVQETDKEENKTIALGTS 37
++QL++L VQETDK+ENK+IALGTS
Sbjct: 165 RDQLVRLNVQETDKDENKSIALGTS 189
>gi|430732181|gb|AGA55491.1| topoisomerase, partial [Carabus macrocephalus cantabricus]
Length = 179
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 24/25 (96%)
Query: 13 KEQLLKLEVQETDKEENKTIALGTS 37
++QL++L VQETDK+ENK+IALGTS
Sbjct: 155 RDQLVRLNVQETDKDENKSIALGTS 179
>gi|71022035|ref|XP_761248.1| DNA topoisomerase I [Ustilago maydis 521]
gi|119370536|sp|P41511.2|TOP1_USTMA RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
I
gi|46097742|gb|EAK82975.1| TOP1_USTMA DNA topoisomerase I [Ustilago maydis 521]
Length = 1019
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
E + K E + +K +AL TSKLNY+DPRI++AW
Sbjct: 795 EMIKKQEAELVNKNNTSDVALSTSKLNYIDPRITLAW 831
>gi|474909|gb|AAC37415.1| topoisomerase I [Ustilago maydis]
Length = 1019
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
E + K E + +K +AL TSKLNY+DPRI++AW
Sbjct: 795 EMIKKQEAELVNKNNTSDVALSTSKLNYIDPRITLAW 831
>gi|388856767|emb|CCF49554.1| probable DNA topoisomerase I [Ustilago hordei]
Length = 1037
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
E + K E + +K +AL TSKLNY+DPRI++AW
Sbjct: 812 EMIKKQEAELVNKNNTSDVALSTSKLNYIDPRITLAW 848
>gi|334683315|dbj|BAK32959.1| topoisomerase I [Ophiorrhiza plumbea]
Length = 920
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + ++ K+E + KE+ K +AL TSK++YL PRI+VAW
Sbjct: 853 IAQTNAKIEKMEGDKKTKEDLKAVALSTSKISYLGPRITVAW 894
>gi|430732213|gb|AGA55507.1| topoisomerase, partial [Carabus amplipennis]
Length = 188
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 23/24 (95%)
Query: 13 KEQLLKLEVQETDKEENKTIALGT 36
++QL++L VQETDK+ENK+IALGT
Sbjct: 165 RDQLVRLNVQETDKDENKSIALGT 188
>gi|345566634|gb|EGX49576.1| hypothetical protein AOL_s00078g65 [Arthrobotrys oligospora ATCC
24927]
Length = 915
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 7/53 (13%)
Query: 5 KKTALGRLKEQLLKL----EVQET---DKEENKTIALGTSKLNYLDPRISVAW 50
K ++ + +EQ+ KL +V+ + DKE ++LGTSK+NY+DPR+SV +
Sbjct: 830 KSPSVEKFEEQITKLDDKIQVKTSMMKDKENTSEVSLGTSKINYIDPRLSVVF 882
>gi|430732203|gb|AGA55502.1| topoisomerase, partial [Carabus lusitanicus latus]
Length = 175
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 23/24 (95%)
Query: 13 KEQLLKLEVQETDKEENKTIALGT 36
++QL++L VQETDK+ENK+IALGT
Sbjct: 152 RDQLVRLNVQETDKDENKSIALGT 175
>gi|441432691|ref|YP_007354733.1| DNA topoisomerase 1b [Acanthamoeba polyphaga moumouvirus]
gi|440383771|gb|AGC02297.1| DNA topoisomerase 1b [Acanthamoeba polyphaga moumouvirus]
Length = 542
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 28 ENKTIALGTSKLNYLDPRISVAW---YNLGFD 56
E K I+LGTSK+NY+DPRI+VA+ +NL D
Sbjct: 488 ELKNISLGTSKINYIDPRITVAFMKRHNLPID 519
>gi|430732189|gb|AGA55495.1| topoisomerase, partial [Carabus riffensis]
Length = 174
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 23/24 (95%)
Query: 13 KEQLLKLEVQETDKEENKTIALGT 36
++QL++L VQETDK+ENK+IALGT
Sbjct: 151 RDQLVRLNVQETDKDENKSIALGT 174
>gi|443893770|dbj|GAC71226.1| DNA topoisomerase I [Pseudozyma antarctica T-34]
Length = 1050
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ + K E + +K +AL TSKLNY+DPRI++AW
Sbjct: 817 DMIRKQEAELVNKNNASDVALSTSKLNYIDPRITLAW 853
>gi|363540711|ref|YP_004894910.1| mg859 gene product [Megavirus chiliensis]
gi|448825862|ref|YP_007418793.1| DNA topoisomerase 1b [Megavirus lba]
gi|350611876|gb|AEQ33320.1| DNA topoisomerase 1b [Megavirus chiliensis]
gi|425701804|gb|AFX92966.1| DNA topoisomerase 1b [Megavirus courdo11]
gi|444237047|gb|AGD92817.1| DNA topoisomerase 1b [Megavirus lba]
Length = 543
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 25/32 (78%), Gaps = 3/32 (9%)
Query: 28 ENKTIALGTSKLNYLDPRISVAW---YNLGFD 56
E K I+LGTSK+NY+DPRI+VA+ +NL D
Sbjct: 489 ELKNISLGTSKINYIDPRITVAFMKKHNLPVD 520
>gi|297300214|ref|XP_002805556.1| PREDICTED: DNA topoisomerase I, mitochondrial-like [Macaca mulatta]
Length = 574
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 16/19 (84%), Positives = 18/19 (94%)
Query: 32 IALGTSKLNYLDPRISVAW 50
+AL TSKLNYLDPRIS+AW
Sbjct: 523 VALSTSKLNYLDPRISIAW 541
>gi|298711983|emb|CBJ32924.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1123
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 28/36 (77%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRI 46
R +++ KL++ D+++NK ++L TSK+NY+DPR+
Sbjct: 903 RWGDKIKKLQIVIRDRDDNKEVSLSTSKINYMDPRV 938
>gi|407465318|ref|YP_006776200.1| 2-alkenal reductase [Candidatus Nitrosopumilus sp. AR2]
gi|407048506|gb|AFS83258.1| 2-alkenal reductase [Candidatus Nitrosopumilus sp. AR2]
Length = 555
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 10 GRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ KE+L KLE+Q E+ K +GTS NY+DPR+ AW
Sbjct: 479 SKHKERLEKLELQIDLSEKTKDYNIGTSLRNYIDPRVFKAW 519
>gi|401414644|ref|XP_003871819.1| putative huntingtin interacting protein (HIP) [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488039|emb|CBZ23284.1| putative huntingtin interacting protein (HIP) [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1058
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 7 TALGRLKEQLLKLEVQETDKEEN-KTIALGTSKLNYLDPRISVAWYNLGFDFYNWSGKTK 65
T L + L +V+ ++ E + LG+ + D I W NL +F+ WS T+
Sbjct: 804 TQLHAIARNLTLYDVEHSEDESSLYCFTLGSRVYSLFDNGI---WANLR-EFFGWSSLTQ 859
Query: 66 KVIKVESFNSLPSQAIKRRIDWDLSG 91
KV +V N Q +K W L+G
Sbjct: 860 KVYRVPQINPYLQQVVKDHQRWQLTG 885
>gi|398009829|ref|XP_003858113.1| huntingtin interacting protein (HIP), putative [Leishmania
donovani]
gi|322496318|emb|CBZ31389.1| huntingtin interacting protein (HIP), putative [Leishmania
donovani]
Length = 1067
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 7 TALGRLKEQLLKLEVQETDKEEN-KTIALGTSKLNYLDPRISVAWYNLGFDFYNWSGKTK 65
T L + L +V+ ++ E + LG+ + D I W NL +F+ WS T+
Sbjct: 802 TQLHAIARNLTFYDVEHSEDESSLYCFTLGSRVYSLFDNGI---WANLR-EFFGWSSLTQ 857
Query: 66 KVIKVESFNSLPSQAIKRRIDWDLSG 91
KV +V N Q +K W L+G
Sbjct: 858 KVYRVPQINPYLQQVVKDHQRWQLTG 883
>gi|146076286|ref|XP_001462889.1| putative huntingtin interacting protein (HIP) [Leishmania infantum
JPCM5]
gi|134066970|emb|CAM65075.1| putative huntingtin interacting protein (HIP) [Leishmania infantum
JPCM5]
Length = 1067
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 7 TALGRLKEQLLKLEVQETDKEEN-KTIALGTSKLNYLDPRISVAWYNLGFDFYNWSGKTK 65
T L + L +V+ ++ E + LG+ + D I W NL +F+ WS T+
Sbjct: 802 TQLHAIARNLTFYDVEHSEDESSLYCFTLGSRVYSLFDNGI---WANLR-EFFGWSSLTQ 857
Query: 66 KVIKVESFNSLPSQAIKRRIDWDLSG 91
KV +V N Q +K W L+G
Sbjct: 858 KVYRVPQINPYLQQVVKDHQRWQLTG 883
>gi|76363703|ref|XP_888588.1| putative huntingtin interacting protein (HIP) [Leishmania major
strain Friedlin]
gi|12311887|emb|CAC22703.1| putative huntingtin interacting protein (HIP) [Leishmania major
strain Friedlin]
Length = 1070
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 7 TALGRLKEQLLKLEVQETDKEEN-KTIALGTSKLNYLDPRISVAWYNLGFDFYNWSGKTK 65
T L + L +V+ ++ E + LG+ + D I W NL +F+ WS T+
Sbjct: 803 TQLHAIARNLTFYDVEHSEDESSLYCFTLGSRVYSLFDNGI---WANLR-EFFGWSSLTQ 858
Query: 66 KVIKVESFNSLPSQAIKRRIDWDLSG 91
KV +V N Q +K W L+G
Sbjct: 859 KVYRVPQINPYLQQVVKDHQRWQLTG 884
>gi|262089250|gb|ACY24472.1| DNA topoisomerase IB [uncultured crenarchaeote 29d5]
Length = 570
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 6 KTALGRLK--EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
KT L +LK +++ KLE Q ++E + LGTS NY+DPR+ +W
Sbjct: 483 KTELQKLKKEQRIEKLEFQIRLQQETRDYNLGTSLRNYIDPRVFKSW 529
>gi|329765703|ref|ZP_08257272.1| 2-alkenal reductase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137769|gb|EGG42036.1| 2-alkenal reductase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 555
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ KE++ KL++Q E+ K LGTS NY+DPRI AW
Sbjct: 480 KHKERVEKLQLQIDLSEKTKDYNLGTSLRNYIDPRIFKAW 519
>gi|310831141|ref|YP_003969784.1| putative DNA topoisomerase IB [Cafeteria roenbergensis virus
BV-PW1]
gi|309386325|gb|ADO67185.1| putative DNA topoisomerase IB [Cafeteria roenbergensis virus
BV-PW1]
Length = 534
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 26 KEENKTIALGTSKLNYLDPRISVAW---YNLGFD 56
K + K ++LGTSK NY+DPRI V++ +NL D
Sbjct: 478 KTKMKNVSLGTSKTNYIDPRIIVSFAKRFNLSLD 511
>gi|393794779|ref|ZP_10378143.1| 2-alkenal reductase, partial [Candidatus Nitrosoarchaeum limnia
BG20]
Length = 404
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 11 RLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
+ KE++ KL++Q E+ K LGTS NY+DPRI AW
Sbjct: 329 KHKERVEKLQLQIDLSEKTKDYNLGTSLRNYIDPRIFKAW 368
>gi|167044902|gb|ABZ09569.1| putative eukaryotic DNA topoisomerase I, catalytic core [uncultured
marine crenarchaeote HF4000_APKG8D22]
Length = 563
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
E++ KLE+Q E+ + LGTS NY+DPRI AW
Sbjct: 490 ERIEKLELQINLTEKTRDYNLGTSLRNYIDPRIFKAW 526
>gi|167042738|gb|ABZ07458.1| putative eukaryotic DNA topoisomerase I, catalytic core [uncultured
marine crenarchaeote HF4000_ANIW133O4]
Length = 563
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAW 50
E++ KLE+Q E+ + LGTS NY+DPRI AW
Sbjct: 490 ERIEKLELQINLTEKTRDYNLGTSLRNYIDPRIFKAW 526
>gi|350403384|ref|XP_003486787.1| PREDICTED: putative gustatory receptor 43a-like [Bombus impatiens]
Length = 439
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query: 9 LGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNWSGKTK 65
+ +L E K+ V T K TI L L YL W+N DFY+WS K K
Sbjct: 126 INKLIEVDKKIGVSSTKKARRFTICLTICSLVYL-------WFNSSLDFYSWSRKAK 175
>gi|340345362|ref|ZP_08668494.1| 2-alkenal reductase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520503|gb|EGP94226.1| 2-alkenal reductase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 555
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 14 EQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYN 52
E+ KL++Q E+ K LGTS NY+DPRI AW N
Sbjct: 483 ERAEKLQLQIDLSEKTKDYNLGTSLRNYIDPRIFKAWTN 521
>gi|340506252|gb|EGR32433.1| hypothetical protein IMG5_083110 [Ichthyophthirius multifiliis]
Length = 675
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%)
Query: 2 TDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISV 48
DK + AL ++++++ + + ++ +KE+NK IALGTSK NY DPRISV
Sbjct: 595 ADKTQEALEKIRKKINEEKNKKDNKEKNKEIALGTSKTNYNDPRISV 641
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.131 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,563,501,231
Number of Sequences: 23463169
Number of extensions: 57389437
Number of successful extensions: 113619
Number of sequences better than 100.0: 819
Number of HSP's better than 100.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 112801
Number of HSP's gapped (non-prelim): 828
length of query: 102
length of database: 8,064,228,071
effective HSP length: 71
effective length of query: 31
effective length of database: 6,398,343,072
effective search space: 198348635232
effective search space used: 198348635232
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)