Your job contains 1 sequence.
>psy5982
MTDKKKTALGRLKEQLLKLEVQETDKEENKTIALGTSKLNYLDPRISVAWYNLGFDFYNW
SGKTKKVIKVESFNSLPSQAIKRRIDWDLSGLPNTRIANLSG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5982
(102 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|H0YAR3 - symbol:TOP1MT "DNA topoisomerase I, mi... 139 1.4e-09 1
UNIPROTKB|F1NXP4 - symbol:TOP1MT "Uncharacterized protein... 143 6.2e-09 1
ZFIN|ZDB-GENE-060616-217 - symbol:top1l "topoisomerase (D... 141 1.4e-08 1
UNIPROTKB|Q969P6 - symbol:TOP1MT "DNA topoisomerase I, mi... 139 1.7e-08 1
UNIPROTKB|A9Q1D5 - symbol:TOP1MT "DNA topoisomerase I, mi... 139 1.7e-08 1
ZFIN|ZDB-GENE-040624-2 - symbol:top1mt "mitochondrial top... 138 2.2e-08 1
UNIPROTKB|Q90WS1 - symbol:top1beta "Topoisomerase I beta"... 138 3.0e-08 1
UNIPROTKB|P11387 - symbol:TOP1 "DNA topoisomerase 1" spec... 137 3.9e-08 1
UNIPROTKB|Q07050 - symbol:TOP1 "DNA topoisomerase 1" spec... 137 3.9e-08 1
UNIPROTKB|Q7YR26 - symbol:TOP1 "DNA topoisomerase 1" spec... 137 3.9e-08 1
MGI|MGI:98788 - symbol:Top1 "topoisomerase (DNA) I" speci... 137 3.9e-08 1
RGD|621246 - symbol:Top1 "topoisomerase (DNA) I" species:... 137 3.9e-08 1
UNIPROTKB|F1MN93 - symbol:TOP1 "Uncharacterized protein" ... 137 3.9e-08 1
UNIPROTKB|F1SDV7 - symbol:TOP1 "Uncharacterized protein" ... 137 3.9e-08 1
UNIPROTKB|F1PUE0 - symbol:TOP1 "Uncharacterized protein" ... 137 3.9e-08 1
UNIPROTKB|I3LHM3 - symbol:TOP1 "Uncharacterized protein" ... 137 4.3e-08 1
FB|FBgn0004924 - symbol:Top1 "Topoisomerase 1" species:72... 137 5.3e-08 1
UNIPROTKB|F1M1S6 - symbol:F1M1S6 "Uncharacterized protein... 134 8.1e-08 1
UNIPROTKB|Q90WS0 - symbol:top1alpha "Topoisomerase I alph... 134 8.2e-08 1
UNIPROTKB|F1NPT1 - symbol:TOP1 "Uncharacterized protein" ... 133 1.0e-07 1
UNIPROTKB|F1SEV4 - symbol:F1SEV4 "Uncharacterized protein... 129 1.6e-07 1
MGI|MGI:1920210 - symbol:Top1mt "DNA topoisomerase 1, mit... 129 2.0e-07 1
RGD|1303177 - symbol:Top1mt "topoisomerase (DNA) I, mitoc... 129 2.0e-07 1
UNIPROTKB|I3LTP0 - symbol:LOC100628093 "Uncharacterized p... 129 2.0e-07 1
WB|WBGene00006595 - symbol:top-1 species:6239 "Caenorhabd... 126 6.2e-07 1
UNIPROTKB|O17966 - symbol:top-1 "DNA topoisomerase 1" spe... 126 6.2e-07 1
TAIR|locus:4515103458 - symbol:AT4G26701 species:3702 "Ar... 109 2.1e-06 1
DICTYBASE|DDB_G0283205 - symbol:top1 "DNA topoisomerase I... 115 1.1e-05 1
UNIPROTKB|A8IDM1 - symbol:TOP1 "DNA topoisomerase I" spec... 111 1.7e-05 1
UNIPROTKB|Q84ZL5 - symbol:OJ1066_B03.125 "Os08g0154600 pr... 111 2.9e-05 1
TAIR|locus:2173862 - symbol:TOP1BETA "DNA topoisomerase 1... 110 3.7e-05 1
UNIPROTKB|Q24BB2 - symbol:TTHERM_01299650 "Eukaryotic DNA... 103 0.00015 1
UNIPROTKB|Q7RE42 - symbol:PY05226 "Eukaryotic DNA topoiso... 103 0.00020 1
ASPGD|ASPL0000055668 - symbol:top1 species:162425 "Emeric... 102 0.00025 1
UNIPROTKB|Q5BGS7 - symbol:AN0253.2 "Topoisomerase I [Sour... 102 0.00025 1
UNIPROTKB|Q75CB7 - symbol:AGOS_ACL008C "ACL008Cp" species... 101 0.00026 1
SGD|S000005366 - symbol:TOP1 "Topoisomerase I" species:49... 100 0.00035 1
POMBASE|SPBC1703.14c - symbol:top1 "DNA topoisomerase I" ... 100 0.00038 1
UNIPROTKB|Q7S0F7 - symbol:NCU09118 "DNA topoisomerase I" ... 99 0.00053 1
>UNIPROTKB|H0YAR3 [details] [associations]
symbol:TOP1MT "DNA topoisomerase I, mitochondrial"
species:9606 "Homo sapiens" [GO:0003917 "DNA topoisomerase type I
activity" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0006265 "DNA topological change" evidence=IEA]
InterPro:IPR009054 InterPro:IPR011010 InterPro:IPR014727
InterPro:IPR018521 PROSITE:PS00176 GO:GO:0005694 GO:GO:0006265
SUPFAM:SSF56349 EMBL:AC087793 HGNC:HGNC:29787 GO:GO:0003917
Gene3D:1.10.132.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
Ensembl:ENST00000519977 Uniprot:H0YAR3
Length = 111
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 3 DKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L + TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 31 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 78
>UNIPROTKB|F1NXP4 [details] [associations]
symbol:TOP1MT "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003917 "DNA topoisomerase type I activity"
evidence=IEA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006265 "DNA topological change" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA]
InterPro:IPR001631 InterPro:IPR008336 InterPro:IPR009054
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 GO:GO:0005694
GO:GO:0042645 GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918
OMA:PEADGCQ GO:GO:0003917 Gene3D:1.10.10.41 Gene3D:1.10.132.10
Gene3D:2.170.11.10 Gene3D:3.90.15.10 InterPro:IPR025834
Pfam:PF14370 SUPFAM:SSF46596 SUPFAM:SSF56741
GeneTree:ENSGT00390000016347 EMBL:AADN02037381 EMBL:AADN02037382
IPI:IPI00584288 Ensembl:ENSGALT00000026012 Uniprot:F1NXP4
Length = 593
Score = 143 (55.4 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 30/47 (63%), Positives = 31/47 (65%)
Query: 4 KKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
KKK L R TDKEENK IALGTSKLNYLDPRIS+AW
Sbjct: 514 KKKKLLERLKEQLAKLNVQATDKEENKQIALGTSKLNYLDPRISIAW 560
>ZFIN|ZDB-GENE-060616-217 [details] [associations]
symbol:top1l "topoisomerase (DNA) I, like"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003917 "DNA topoisomerase type I activity" evidence=IEA;IBA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006265 "DNA topological
change" evidence=IEA;IBA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0031298 "replication
fork protection complex" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0005730 "nucleolus" evidence=IBA]
[GO:0006338 "chromatin remodeling" evidence=IBA] [GO:0006260 "DNA
replication" evidence=IBA] [GO:0016853 "isomerase activity"
evidence=IEA] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR009054 InterPro:IPR011010 InterPro:IPR013030
InterPro:IPR013034 InterPro:IPR013499 InterPro:IPR013500
InterPro:IPR014711 InterPro:IPR014727 InterPro:IPR018521
Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416 PROSITE:PS00176
SMART:SM00435 ZFIN:ZDB-GENE-060616-217 GO:GO:0007059 GO:GO:0005730
GO:GO:0006260 GO:GO:0006338 GO:GO:0031298 GO:GO:0006265
SUPFAM:SSF56349 GO:GO:0003918 eggNOG:COG3569 HOGENOM:HOG000105469
HOVERGEN:HBG007988 KO:K03163 GO:GO:0003917 Gene3D:1.10.10.41
Gene3D:1.10.132.10 Gene3D:2.170.11.10 Gene3D:3.90.15.10
InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596 SUPFAM:SSF56741
GeneTree:ENSGT00390000016347 OMA:ESVKFYY OrthoDB:EOG4V170F
EMBL:CR548630 EMBL:BC117588 IPI:IPI00860024 RefSeq:NP_001037789.1
UniGene:Dr.67676 SMR:Q1ED17 STRING:Q1ED17
Ensembl:ENSDART00000065949 GeneID:553496 KEGG:dre:553496 CTD:553496
InParanoid:Q1ED17 NextBio:20880241 Uniprot:Q1ED17
Length = 758
Score = 141 (54.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 30/48 (62%), Positives = 32/48 (66%)
Query: 3 DKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+ KK AL R TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 678 EAKKKALQRVEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 725
>UNIPROTKB|Q969P6 [details] [associations]
symbol:TOP1MT "DNA topoisomerase I, mitochondrial"
species:9606 "Homo sapiens" [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003917 "DNA topoisomerase type I activity"
evidence=IBA] [GO:0005730 "nucleolus" evidence=IBA] [GO:0006260
"DNA replication" evidence=IBA] [GO:0006265 "DNA topological
change" evidence=IBA] [GO:0006338 "chromatin remodeling"
evidence=IBA] [GO:0007059 "chromosome segregation" evidence=IBA]
[GO:0031298 "replication fork protection complex" evidence=IBA]
[GO:0042645 "mitochondrial nucleoid" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR009054 InterPro:IPR011010 InterPro:IPR013030
InterPro:IPR013034 InterPro:IPR013499 InterPro:IPR013500
InterPro:IPR014711 InterPro:IPR014727 InterPro:IPR018521
Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416 PROSITE:PS00176
SMART:SM00435 GO:GO:0005524 GO:GO:0005694 GO:GO:0006260
DrugBank:DB01030 GO:GO:0042645 DrugBank:DB00762 GO:GO:0006265
SUPFAM:SSF56349 GO:GO:0003918 EMBL:AF349031 EMBL:AF349018
EMBL:AF349019 EMBL:AF349020 EMBL:AF349021 EMBL:AF349022
EMBL:AF349023 EMBL:AF349024 EMBL:AF349025 EMBL:AF349026
EMBL:AF349027 EMBL:AF349028 EMBL:AF349029 EMBL:AF349030
EMBL:AF349017 EMBL:AK316380 EMBL:AC087793 EMBL:BC044646
EMBL:BC052285 EMBL:BC071914 IPI:IPI00465141 IPI:IPI00984931
RefSeq:NP_001245375.1 RefSeq:NP_001245376.1 RefSeq:NP_443195.1
UniGene:Hs.528574 ProteinModelPortal:Q969P6 SMR:Q969P6
STRING:Q969P6 PhosphoSite:Q969P6 DMDM:20140694 PaxDb:Q969P6
PRIDE:Q969P6 Ensembl:ENST00000329245 Ensembl:ENST00000519148
GeneID:116447 KEGG:hsa:116447 UCSC:uc003yxz.3 CTD:116447
GeneCards:GC08M144391 HGNC:HGNC:29787 HPA:HPA001915 HPA:HPA021542
MIM:606387 neXtProt:NX_Q969P6 PharmGKB:PA134922772 eggNOG:COG3569
HOGENOM:HOG000105469 HOVERGEN:HBG007988 InParanoid:Q969P6 KO:K03163
OMA:PEADGCQ OrthoDB:EOG49S667 PhylomeDB:Q969P6 GenomeRNAi:116447
NextBio:79927 ArrayExpress:Q969P6 Bgee:Q969P6 CleanEx:HS_TOP1MT
Genevestigator:Q969P6 GermOnline:ENSG00000184428 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 Uniprot:Q969P6
Length = 601
Score = 139 (54.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 3 DKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L + TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 521 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 568
>UNIPROTKB|A9Q1D5 [details] [associations]
symbol:TOP1MT "DNA topoisomerase I, mitochondrial"
species:9598 "Pan troglodytes" [GO:0003917 "DNA topoisomerase type
I activity" evidence=IBA] [GO:0006260 "DNA replication"
evidence=IBA] [GO:0006265 "DNA topological change" evidence=IBA]
[GO:0042645 "mitochondrial nucleoid" evidence=IBA] [GO:0005730
"nucleolus" evidence=IBA] [GO:0006338 "chromatin remodeling"
evidence=IBA] [GO:0007059 "chromosome segregation" evidence=IBA]
[GO:0031298 "replication fork protection complex" evidence=IBA]
InterPro:IPR001631 InterPro:IPR008336 InterPro:IPR009054
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 GO:GO:0005524
GO:GO:0005694 GO:GO:0006260 GO:GO:0042645 GO:GO:0006265
SUPFAM:SSF56349 GO:GO:0003918 CTD:116447 eggNOG:COG3569
HOGENOM:HOG000105469 KO:K03163 OrthoDB:EOG49S667 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 EMBL:EF421830 RefSeq:NP_001106268.1
UniGene:Ptr.6282 ProteinModelPortal:A9Q1D5 SMR:A9Q1D5 GeneID:472883
KEGG:ptr:472883 InParanoid:A9Q1D5 NextBio:20849513 Uniprot:A9Q1D5
Length = 601
Score = 139 (54.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 3 DKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+KK+ L + TDKEENK +ALGTSKLNYLDPRIS+AW
Sbjct: 521 EKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAW 568
>ZFIN|ZDB-GENE-040624-2 [details] [associations]
symbol:top1mt "mitochondrial topoisomerase I"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003917 "DNA topoisomerase type I activity" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006265 "DNA topological
change" evidence=IEA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0016853 "isomerase
activity" evidence=IEA] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR009054 InterPro:IPR011010 InterPro:IPR013030
InterPro:IPR013034 InterPro:IPR013499 InterPro:IPR013500
InterPro:IPR014711 InterPro:IPR014727 InterPro:IPR018521
Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416 PROSITE:PS00176
SMART:SM00435 ZFIN:ZDB-GENE-040624-2 GO:GO:0005694 GO:GO:0006265
SUPFAM:SSF56349 GO:GO:0003918 CTD:116447 HOVERGEN:HBG007988
GO:GO:0003917 Gene3D:1.10.10.41 Gene3D:1.10.132.10
Gene3D:2.170.11.10 Gene3D:3.90.15.10 InterPro:IPR025834
Pfam:PF14370 SUPFAM:SSF46596 SUPFAM:SSF56741 HSSP:P11387
eggNOG:NOG317235 EMBL:BC096851 EMBL:AY429655 IPI:IPI00513305
RefSeq:NP_001001838.1 UniGene:Dr.79693 SMR:Q6T721 GeneID:415098
KEGG:dre:415098 NextBio:20818783 Uniprot:Q6T721
Length = 600
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 28/50 (56%), Positives = 34/50 (68%)
Query: 1 MTDKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+ +KK+ A+ R TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 518 LVEKKQKAVQRLCDQLKKLQLQETDREENKVIALGTSKLNYLDPRITVAW 567
>UNIPROTKB|Q90WS1 [details] [associations]
symbol:top1beta "Topoisomerase I beta" species:31033
"Takifugu rubripes" [GO:0003917 "DNA topoisomerase type I activity"
evidence=IBA] [GO:0005730 "nucleolus" evidence=IBA] [GO:0006260
"DNA replication" evidence=IBA] [GO:0006265 "DNA topological
change" evidence=IBA] [GO:0006338 "chromatin remodeling"
evidence=IBA] [GO:0007059 "chromosome segregation" evidence=IBA]
[GO:0031298 "replication fork protection complex" evidence=IBA]
InterPro:IPR001631 InterPro:IPR008336 InterPro:IPR009054
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 GO:GO:0007059
GO:GO:0005730 GO:GO:0006260 GO:GO:0006338 GO:GO:0031298
GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918 eggNOG:COG3569
HOGENOM:HOG000105469 GO:GO:0003917 Gene3D:1.10.10.41
Gene3D:1.10.132.10 Gene3D:2.170.11.10 Gene3D:3.90.15.10
InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596 SUPFAM:SSF56741
HSSP:P11387 OrthoDB:EOG4V170F EMBL:AL035358 RefSeq:XP_003973717.1
ProteinModelPortal:Q90WS1 SMR:Q90WS1 GeneID:101069232
InParanoid:Q90WS1 Uniprot:Q90WS1
Length = 753
Score = 138 (53.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 29/48 (60%), Positives = 32/48 (66%)
Query: 3 DKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+ KK A+ R TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 673 EAKKKAVQRIDDQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAW 720
>UNIPROTKB|P11387 [details] [associations]
symbol:TOP1 "DNA topoisomerase 1" species:9606 "Homo
sapiens" [GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing)
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0043204 "perikaryon"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IBA]
[GO:0006265 "DNA topological change" evidence=IDA;IBA] [GO:0006338
"chromatin remodeling" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0031298 "replication fork protection
complex" evidence=IBA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0012501 "programmed cell death" evidence=NAS] [GO:0016310
"phosphorylation" evidence=NAS] [GO:0042493 "response to drug"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0003917 "DNA
topoisomerase type I activity" evidence=IDA;IMP] [GO:0000228
"nuclear chromosome" evidence=IDA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IDA] InterPro:IPR001631
InterPro:IPR008336 InterPro:IPR009054 InterPro:IPR011010
InterPro:IPR013030 InterPro:IPR013034 InterPro:IPR013499
InterPro:IPR013500 InterPro:IPR014711 InterPro:IPR014727
InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416
PROSITE:PS00176 SMART:SM00435 GO:GO:0005524 EMBL:CH471077
GO:GO:0019048 GO:GO:0007059 GO:GO:0005654 GO:GO:0005730
GO:GO:0042493 GO:GO:0006260 GO:GO:0016310 GO:GO:0043204
Pathway_Interaction_DB:caspase_pathway GO:GO:0003682 GO:GO:0040016
DrugBank:DB01030 GO:GO:0006338 GO:GO:0000932 DrugBank:DB04967
GO:GO:0012501 GO:GO:0031298 DrugBank:DB00762 GO:GO:0006265
SUPFAM:SSF56349 GO:GO:0003918 EMBL:AL022394 eggNOG:COG3569
HOVERGEN:HBG007988 KO:K03163 GO:GO:0003917 Gene3D:1.10.10.41
Gene3D:1.10.132.10 Gene3D:2.170.11.10 Gene3D:3.90.15.10
InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596 SUPFAM:SSF56741
CTD:7150 ChiTaRS:TOP1 EMBL:J03250 EMBL:M60706 EMBL:M60688
EMBL:M60689 EMBL:M60690 EMBL:M60691 EMBL:M60692 EMBL:M60693
EMBL:M60694 EMBL:M60695 EMBL:M60696 EMBL:M60697 EMBL:M60698
EMBL:M60699 EMBL:M60700 EMBL:M60701 EMBL:M60702 EMBL:M60703
EMBL:M60704 EMBL:M60705 EMBL:AK292943 EMBL:AL035652 EMBL:X52601
EMBL:U07804 EMBL:U07806 EMBL:X16479 EMBL:M27913 IPI:IPI00413611
PIR:A30887 RefSeq:NP_003277.1 UniGene:Hs.472737 PDB:1A31 PDB:1A35
PDB:1A36 PDB:1EJ9 PDB:1K4S PDB:1K4T PDB:1LPQ PDB:1NH3 PDB:1R49
PDB:1RR8 PDB:1RRJ PDB:1SC7 PDB:1SEU PDB:1T8I PDB:1TL8 PDBsum:1A31
PDBsum:1A35 PDBsum:1A36 PDBsum:1EJ9 PDBsum:1K4S PDBsum:1K4T
PDBsum:1LPQ PDBsum:1NH3 PDBsum:1R49 PDBsum:1RR8 PDBsum:1RRJ
PDBsum:1SC7 PDBsum:1SEU PDBsum:1T8I PDBsum:1TL8 DisProt:DP00075
ProteinModelPortal:P11387 SMR:P11387 IntAct:P11387 MINT:MINT-94018
STRING:P11387 PhosphoSite:P11387 DMDM:12644118 SWISS-2DPAGE:P11387
PaxDb:P11387 PeptideAtlas:P11387 PRIDE:P11387
Ensembl:ENST00000361337 GeneID:7150 KEGG:hsa:7150 UCSC:uc002xjl.3
GeneCards:GC20P039657 H-InvDB:HIX0015818 H-InvDB:HIX0040702
HGNC:HGNC:11986 HPA:CAB009058 HPA:HPA019039 MIM:126420
neXtProt:NX_P11387 PharmGKB:PA353 InParanoid:P11387 OMA:ESVKFYY
OrthoDB:EOG4V170F PhylomeDB:P11387 BindingDB:P11387
ChEMBL:CHEMBL1781 EvolutionaryTrace:P11387 GenomeRNAi:7150
NextBio:27982 PMAP-CutDB:P11387 ArrayExpress:P11387 Bgee:P11387
CleanEx:HS_TOP1 Genevestigator:P11387 GermOnline:ENSG00000198900
Uniprot:P11387
Length = 765
Score = 137 (53.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 28/50 (56%), Positives = 33/50 (66%)
Query: 1 MTDKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ R TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 683 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 732
>UNIPROTKB|Q07050 [details] [associations]
symbol:TOP1 "DNA topoisomerase 1" species:10029 "Cricetulus
griseus" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0003917 "DNA topoisomerase
type I activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0006265 "DNA topological change" evidence=ISS]
[GO:0000228 "nuclear chromosome" evidence=ISS] InterPro:IPR001631
InterPro:IPR008336 InterPro:IPR009054 InterPro:IPR011010
InterPro:IPR013030 InterPro:IPR013034 InterPro:IPR013499
InterPro:IPR013500 InterPro:IPR014711 InterPro:IPR014727
InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416
PROSITE:PS00176 SMART:SM00435 GO:GO:0005524 GO:GO:0005694
GO:GO:0005654 GO:GO:0005730 GO:GO:0003682 GO:GO:0006265
SUPFAM:SSF56349 GO:GO:0003918 HOVERGEN:HBG007988 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 EMBL:Z21624 EMBL:Z21625 PIR:A49546
RefSeq:NP_001230963.1 ProteinModelPortal:Q07050 SMR:Q07050
PRIDE:Q07050 GeneID:100689046 CTD:7150 Uniprot:Q07050
Length = 767
Score = 137 (53.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 28/50 (56%), Positives = 33/50 (66%)
Query: 1 MTDKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ R TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>UNIPROTKB|Q7YR26 [details] [associations]
symbol:TOP1 "DNA topoisomerase 1" species:9534 "Chlorocebus
aethiops" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0003917 "DNA topoisomerase
type I activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0006265 "DNA topological change" evidence=ISS]
[GO:0000228 "nuclear chromosome" evidence=ISS] InterPro:IPR001631
InterPro:IPR008336 InterPro:IPR009054 InterPro:IPR011010
InterPro:IPR013030 InterPro:IPR013034 InterPro:IPR013499
InterPro:IPR013500 InterPro:IPR014711 InterPro:IPR014727
InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416
PROSITE:PS00176 SMART:SM00435 GO:GO:0005524 GO:GO:0005694
GO:GO:0005654 GO:GO:0005730 GO:GO:0003682 GO:GO:0006265
SUPFAM:SSF56349 GO:GO:0003918 HOVERGEN:HBG007988 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 EMBL:AB089321 ProteinModelPortal:Q7YR26 SMR:Q7YR26
PRIDE:Q7YR26 BindingDB:Q7YR26 ChEMBL:CHEMBL5265 Uniprot:Q7YR26
Length = 767
Score = 137 (53.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 28/50 (56%), Positives = 33/50 (66%)
Query: 1 MTDKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ R TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>MGI|MGI:98788 [details] [associations]
symbol:Top1 "topoisomerase (DNA) I" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003682 "chromatin
binding" evidence=ISO] [GO:0003916 "DNA topoisomerase activity"
evidence=IEA] [GO:0003917 "DNA topoisomerase type I activity"
evidence=ISO;IDA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006265 "DNA
topological change" evidence=ISO;IDA] [GO:0006338 "chromatin
remodeling" evidence=IBA] [GO:0007059 "chromosome segregation"
evidence=IBA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0009303 "rRNA transcription" evidence=ISO] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0031298 "replication fork
protection complex" evidence=IBA] [GO:0031490 "chromatin DNA
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0040016 "embryonic cleavage" evidence=IMP]
[GO:0043204 "perikaryon" evidence=IDA] InterPro:IPR001631
InterPro:IPR008336 InterPro:IPR009054 InterPro:IPR011010
InterPro:IPR013030 InterPro:IPR013034 InterPro:IPR013499
InterPro:IPR013500 InterPro:IPR014711 InterPro:IPR014727
InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416
PROSITE:PS00176 SMART:SM00435 MGI:MGI:98788 GO:GO:0005524
GO:GO:0005737 GO:GO:0007059 GO:GO:0005654 GO:GO:0005730
GO:GO:0042493 GO:GO:0006260 GO:GO:0043204 GO:GO:0003682
GO:GO:0040016 GO:GO:0006338 GO:GO:0000932 GO:GO:0031298
GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918 eggNOG:COG3569
HOGENOM:HOG000105469 HOVERGEN:HBG007988 KO:K03163 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 GeneTree:ENSGT00390000016347 CTD:7150 ChiTaRS:TOP1
OMA:ESVKFYY OrthoDB:EOG4V170F EMBL:D10061 EMBL:L20632 EMBL:AL590414
EMBL:AL591673 IPI:IPI00109764 PIR:JU0144 RefSeq:NP_033434.2
UniGene:Mm.217233 ProteinModelPortal:Q04750 SMR:Q04750
MINT:MINT-1868161 STRING:Q04750 PhosphoSite:Q04750 PaxDb:Q04750
PRIDE:Q04750 Ensembl:ENSMUST00000109468 GeneID:21969 KEGG:mmu:21969
UCSC:uc008nqy.1 InParanoid:Q04750 BindingDB:Q04750
ChEMBL:CHEMBL2814 NextBio:301666 PMAP-CutDB:Q04750 Bgee:Q04750
CleanEx:MM_TOP1 Genevestigator:Q04750 GermOnline:ENSMUSG00000070544
Uniprot:Q04750
Length = 767
Score = 137 (53.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 28/50 (56%), Positives = 33/50 (66%)
Query: 1 MTDKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ R TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>RGD|621246 [details] [associations]
symbol:Top1 "topoisomerase (DNA) I" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0001651 "dense fibrillar component" evidence=IDA]
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003682 "chromatin
binding" evidence=ISO] [GO:0003917 "DNA topoisomerase type I
activity" evidence=ISO;IDA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654
"nucleoplasm" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006260
"DNA replication" evidence=ISO;IBA] [GO:0006265 "DNA topological
change" evidence=ISO;IDA] [GO:0006338 "chromatin remodeling"
evidence=IBA] [GO:0007059 "chromosome segregation" evidence=IBA]
[GO:0009266 "response to temperature stimulus" evidence=IEP]
[GO:0009303 "rRNA transcription" evidence=IMP] [GO:0031100 "organ
regeneration" evidence=IEP] [GO:0031298 "replication fork
protection complex" evidence=IBA] [GO:0031490 "chromatin DNA
binding" evidence=IDA] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0033554 "cellular response to stress"
evidence=IEP] [GO:0040016 "embryonic cleavage" evidence=ISO]
[GO:0042493 "response to drug" evidence=ISO] [GO:0043204
"perikaryon" evidence=ISO] [GO:0051591 "response to cAMP"
evidence=IEP] [GO:0071373 "cellular response to luteinizing hormone
stimulus" evidence=IEP] [GO:0000228 "nuclear chromosome"
evidence=ISO] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR009054 InterPro:IPR011010 InterPro:IPR013030
InterPro:IPR013034 InterPro:IPR013499 InterPro:IPR013500
InterPro:IPR014711 InterPro:IPR014727 InterPro:IPR018521
Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416 PROSITE:PS00176
SMART:SM00435 RGD:621246 GO:GO:0005524 GO:GO:0007059 GO:GO:0005654
GO:GO:0005730 GO:GO:0032403 GO:GO:0033554 GO:GO:0071373
GO:GO:0006260 GO:GO:0031100 GO:GO:0006338 GO:GO:0051591
GO:GO:0009303 GO:GO:0031490 GO:GO:0009266 GO:GO:0031298
GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918 eggNOG:COG3569
HOGENOM:HOG000105469 HOVERGEN:HBG007988 KO:K03163 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 CTD:7150 OrthoDB:EOG4V170F EMBL:AF140782
IPI:IPI00204133 RefSeq:NP_072137.1 UniGene:Rn.91572
ProteinModelPortal:Q9WUL0 SMR:Q9WUL0 IntAct:Q9WUL0 STRING:Q9WUL0
PhosphoSite:Q9WUL0 PRIDE:Q9WUL0 Ensembl:ENSRNOT00000034781
GeneID:64550 KEGG:rno:64550 UCSC:RGD:621246 BindingDB:Q9WUL0
ChEMBL:CHEMBL1075164 NextBio:613440 ArrayExpress:Q9WUL0
Genevestigator:Q9WUL0 GermOnline:ENSRNOG00000030310 Uniprot:Q9WUL0
Length = 767
Score = 137 (53.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 28/50 (56%), Positives = 33/50 (66%)
Query: 1 MTDKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ R TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 685 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 734
>UNIPROTKB|F1MN93 [details] [associations]
symbol:TOP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043204 "perikaryon" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0006265 "DNA topological change" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0003917
"DNA topoisomerase type I activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] InterPro:IPR001631
InterPro:IPR008336 InterPro:IPR009054 InterPro:IPR011010
InterPro:IPR013030 InterPro:IPR013034 InterPro:IPR013499
InterPro:IPR013500 InterPro:IPR014711 InterPro:IPR014727
InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416
PROSITE:PS00176 SMART:SM00435 GO:GO:0005654 GO:GO:0005730
GO:GO:0042493 GO:GO:0006260 GO:GO:0043204 GO:GO:0003682
GO:GO:0040016 GO:GO:0000932 GO:GO:0000228 GO:GO:0006265
SUPFAM:SSF56349 GO:GO:0003918 KO:K03163 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 GeneTree:ENSGT00390000016347 CTD:7150 OMA:ESVKFYY
EMBL:DAAA02036643 EMBL:DAAA02036644 IPI:IPI00701632
RefSeq:NP_001193416.1 UniGene:Bt.39255 PRIDE:F1MN93
Ensembl:ENSBTAT00000010466 GeneID:534799 KEGG:bta:534799
NextBio:20876536 ArrayExpress:F1MN93 Uniprot:F1MN93
Length = 769
Score = 137 (53.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 28/50 (56%), Positives = 33/50 (66%)
Query: 1 MTDKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ R TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 687 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 736
>UNIPROTKB|F1SDV7 [details] [associations]
symbol:TOP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006265 "DNA topological change" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IEA]
[GO:0003917 "DNA topoisomerase type I activity" evidence=IEA]
InterPro:IPR001631 InterPro:IPR008336 InterPro:IPR009054
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 GO:GO:0005694
GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 GeneTree:ENSGT00390000016347 EMBL:CU062531
Ensembl:ENSSSCT00000008047 Uniprot:F1SDV7
Length = 769
Score = 137 (53.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 28/50 (56%), Positives = 33/50 (66%)
Query: 1 MTDKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ R TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 687 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 736
>UNIPROTKB|F1PUE0 [details] [associations]
symbol:TOP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006265 "DNA topological change"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0003918
"DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA] [GO:0003917 "DNA topoisomerase type I activity"
evidence=IEA] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR009054 InterPro:IPR011010 InterPro:IPR013030
InterPro:IPR013034 InterPro:IPR013499 InterPro:IPR013500
InterPro:IPR014711 InterPro:IPR014727 InterPro:IPR018521
Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416 PROSITE:PS00176
SMART:SM00435 GO:GO:0005694 GO:GO:0006265 SUPFAM:SSF56349
GO:GO:0003918 KO:K03163 GO:GO:0003917 Gene3D:1.10.10.41
Gene3D:1.10.132.10 Gene3D:2.170.11.10 Gene3D:3.90.15.10
InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596 SUPFAM:SSF56741
GeneTree:ENSGT00390000016347 CTD:7150 OMA:ESVKFYY EMBL:AAEX03013937
EMBL:AAEX03013938 EMBL:AAEX03013939 RefSeq:XP_534420.3
Ensembl:ENSCAFT00000014397 GeneID:477229 KEGG:cfa:477229
Uniprot:F1PUE0
Length = 770
Score = 137 (53.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 28/50 (56%), Positives = 33/50 (66%)
Query: 1 MTDKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ R TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 688 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 737
>UNIPROTKB|I3LHM3 [details] [associations]
symbol:TOP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043204 "perikaryon" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0006265 "DNA topological change" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0003917
"DNA topoisomerase type I activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] InterPro:IPR001631
InterPro:IPR008336 InterPro:IPR009054 InterPro:IPR011010
InterPro:IPR013030 InterPro:IPR013034 InterPro:IPR013499
InterPro:IPR013500 InterPro:IPR014711 InterPro:IPR014727
InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416
PROSITE:PS00176 SMART:SM00435 GO:GO:0005654 GO:GO:0005730
GO:GO:0042493 GO:GO:0006260 GO:GO:0043204 GO:GO:0003682
GO:GO:0040016 GO:GO:0000932 GO:GO:0000228 GO:GO:0006265
SUPFAM:SSF56349 GO:GO:0003918 GO:GO:0003917 Gene3D:1.10.10.41
Gene3D:1.10.132.10 Gene3D:2.170.11.10 Gene3D:3.90.15.10
InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596 SUPFAM:SSF56741
GeneTree:ENSGT00390000016347 OMA:ESVKFYY EMBL:CU062531
Ensembl:ENSSSCT00000029351 Uniprot:I3LHM3
Length = 820
Score = 137 (53.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 28/50 (56%), Positives = 33/50 (66%)
Query: 1 MTDKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+ + KK A+ R TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 753 VVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 802
>FB|FBgn0004924 [details] [associations]
symbol:Top1 "Topoisomerase 1" species:7227 "Drosophila
melanogaster" [GO:0006265 "DNA topological change" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003917 "DNA topoisomerase
type I activity" evidence=ISS;NAS;IDA] [GO:0005703 "polytene
chromosome puff" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0003916 "DNA topoisomerase activity" evidence=IDA] [GO:0005665
"DNA-directed RNA polymerase II, core complex" evidence=IDA]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0002168
"instar larval development" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009790 "embryo development"
evidence=IMP] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0006468 "protein
phosphorylation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0004672 "protein kinase activity" evidence=IDA]
[GO:0031298 "replication fork protection complex" evidence=IBA]
[GO:0006338 "chromatin remodeling" evidence=IBA] [GO:0006260 "DNA
replication" evidence=IBA] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR009054 InterPro:IPR011010 InterPro:IPR013030
InterPro:IPR013034 InterPro:IPR013499 InterPro:IPR013500
InterPro:IPR014711 InterPro:IPR014727 InterPro:IPR018521
Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416 PROSITE:PS00176
SMART:SM00435 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0007059 GO:GO:0005730 GO:GO:0008283 GO:GO:0006260
EMBL:AE014298 GO:GO:0048477 GO:GO:0006338 GO:GO:0009790
GO:GO:0004672 GO:GO:0005719 GO:GO:0030261 GO:GO:0002168
GO:GO:0005703 GO:GO:0031298 GO:GO:0006265 SUPFAM:SSF56349
GO:GO:0003918 eggNOG:COG3569 KO:K03163 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 CTD:7150 EMBL:M74557 EMBL:U80064 PIR:S35521
RefSeq:NP_001014742.1 RefSeq:NP_511161.2 UniGene:Dm.2912
ProteinModelPortal:P30189 SMR:P30189 IntAct:P30189 MINT:MINT-748832
STRING:P30189 PaxDb:P30189 PRIDE:P30189 GeneID:32458
KEGG:dme:Dmel_CG6146 FlyBase:FBgn0004924 InParanoid:P30189
OrthoDB:EOG4MCVFF ChiTaRS:TOP1 GenomeRNAi:32458 NextBio:778562
Bgee:P30189 GermOnline:CG6146 Uniprot:P30189
Length = 972
Score = 137 (53.3 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 29/48 (60%), Positives = 32/48 (66%)
Query: 3 DKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+KK L R TD++ENKTIALGTSKLNYLDPRISVAW
Sbjct: 892 EKKGKQLERLRDQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAW 939
>UNIPROTKB|F1M1S6 [details] [associations]
symbol:F1M1S6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003917 "DNA topoisomerase type I activity"
evidence=IEA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006265 "DNA topological change" evidence=IEA]
InterPro:IPR001631 InterPro:IPR008336 InterPro:IPR009054
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 GO:GO:0005694
GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 IPI:IPI00361978 Ensembl:ENSRNOT00000016719
Uniprot:F1M1S6
Length = 760
Score = 134 (52.2 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 28/46 (60%), Positives = 31/46 (67%)
Query: 5 KKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
KK A+ R TD+EENK IALGTSKLNYLDPRI+VAW
Sbjct: 682 KKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAW 727
>UNIPROTKB|Q90WS0 [details] [associations]
symbol:top1alpha "Topoisomerase I alpha" species:31033
"Takifugu rubripes" [GO:0003917 "DNA topoisomerase type I activity"
evidence=IBA] [GO:0005730 "nucleolus" evidence=IBA] [GO:0006260
"DNA replication" evidence=IBA] [GO:0006265 "DNA topological
change" evidence=IBA] [GO:0006338 "chromatin remodeling"
evidence=IBA] [GO:0007059 "chromosome segregation" evidence=IBA]
[GO:0031298 "replication fork protection complex" evidence=IBA]
InterPro:IPR001631 InterPro:IPR008336 InterPro:IPR009054
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 GO:GO:0007059
GO:GO:0005730 GO:GO:0006260 GO:GO:0006338 GO:GO:0031298
GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918 eggNOG:COG3569
HOGENOM:HOG000105469 GO:GO:0003917 Gene3D:1.10.10.41
Gene3D:1.10.132.10 Gene3D:2.170.11.10 Gene3D:3.90.15.10
InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596 SUPFAM:SSF56741
HSSP:P11387 EMBL:AL035357 ProteinModelPortal:Q90WS0 SMR:Q90WS0
OrthoDB:EOG48GW2T Uniprot:Q90WS0
Length = 767
Score = 134 (52.2 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 28/46 (60%), Positives = 31/46 (67%)
Query: 5 KKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
K+ A+ R TD+EENK IALGTSKLNYLDPRISVAW
Sbjct: 689 KRKAVQRIEEQLMKLQVQATDREENKQIALGTSKLNYLDPRISVAW 734
>UNIPROTKB|F1NPT1 [details] [associations]
symbol:TOP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing)
activity" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003917 "DNA topoisomerase type I activity" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006265 "DNA topological change" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
InterPro:IPR001631 InterPro:IPR008336 InterPro:IPR009054
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 GO:GO:0005654
GO:GO:0005730 GO:GO:0042493 GO:GO:0006260 GO:GO:0043204
GO:GO:0003682 GO:GO:0000932 GO:GO:0000228 GO:GO:0006265
SUPFAM:SSF56349 GO:GO:0003918 GO:GO:0003917 Gene3D:1.10.10.41
Gene3D:1.10.132.10 Gene3D:2.170.11.10 Gene3D:3.90.15.10
InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596 SUPFAM:SSF56741
GeneTree:ENSGT00390000016347 OMA:ESVKFYY EMBL:AADN02019362
IPI:IPI00596648 Ensembl:ENSGALT00000005832 ArrayExpress:F1NPT1
Uniprot:F1NPT1
Length = 747
Score = 133 (51.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 28/48 (58%), Positives = 31/48 (64%)
Query: 3 DKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+ KK A+ R TD+EENK IAL TSKLNYLDPRISVAW
Sbjct: 667 ESKKKAVQRIEEQLMKLEVQATDREENKQIALSTSKLNYLDPRISVAW 714
>UNIPROTKB|F1SEV4 [details] [associations]
symbol:F1SEV4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006265 "DNA topological change" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IEA]
[GO:0003917 "DNA topoisomerase type I activity" evidence=IEA]
InterPro:IPR001631 InterPro:IPR008336 InterPro:IPR009054
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 GO:GO:0005694
GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 GeneTree:ENSGT00390000016347 EMBL:FP085504
Ensembl:ENSSSCT00000007623 Uniprot:F1SEV4
Length = 522
Score = 129 (50.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 3 DKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+K++ L + TDKEE K +ALGTSKLNYLDPRIS+AW
Sbjct: 442 EKRRRRLEKLEEQLVRLGTQATDKEEGKQVALGTSKLNYLDPRISIAW 489
>MGI|MGI:1920210 [details] [associations]
symbol:Top1mt "DNA topoisomerase 1, mitochondrial"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003916
"DNA topoisomerase activity" evidence=IEA] [GO:0003917 "DNA
topoisomerase type I activity" evidence=IBA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IBA] [GO:0006265 "DNA topological change" evidence=IBA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO;IBA] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR009054 InterPro:IPR011010 InterPro:IPR013030
InterPro:IPR013034 InterPro:IPR013499 InterPro:IPR013500
InterPro:IPR014711 InterPro:IPR014727 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 MGI:MGI:1920210
GO:GO:0005524 GO:GO:0005694 GO:GO:0006260 EMBL:CH466545
GO:GO:0042645 GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918
CTD:116447 eggNOG:COG3569 HOGENOM:HOG000105469 KO:K03163
OMA:PEADGCQ OrthoDB:EOG49S667 GO:GO:0003917 Gene3D:1.10.10.41
Gene3D:1.10.132.10 Gene3D:2.170.11.10 Gene3D:3.90.15.10
InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596 SUPFAM:SSF56741
EMBL:AF362952 EMBL:AK147119 EMBL:BC138582 EMBL:BC138583
IPI:IPI00454114 RefSeq:NP_082680.1 UniGene:Mm.182401 HSSP:P11387
ProteinModelPortal:Q8R4U6 SMR:Q8R4U6 PhosphoSite:Q8R4U6
PaxDb:Q8R4U6 PRIDE:Q8R4U6 Ensembl:ENSMUST00000000958 GeneID:72960
KEGG:mmu:72960 UCSC:uc007whb.1 GeneTree:ENSGT00390000016347
InParanoid:Q8R4U6 NextBio:337229 Bgee:Q8R4U6 Genevestigator:Q8R4U6
Uniprot:Q8R4U6
Length = 593
Score = 129 (50.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 23/27 (85%), Positives = 26/27 (96%)
Query: 24 TDKEENKTIALGTSKLNYLDPRISVAW 50
TDKEENK +ALGT+KLNYLDPRIS+AW
Sbjct: 534 TDKEENKQVALGTAKLNYLDPRISIAW 560
>RGD|1303177 [details] [associations]
symbol:Top1mt "topoisomerase (DNA) I, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0003917 "DNA topoisomerase
type I activity" evidence=IBA] [GO:0003918 "DNA topoisomerase type
II (ATP-hydrolyzing) activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IBA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0006260 "DNA
replication" evidence=IBA] [GO:0006265 "DNA topological change"
evidence=IBA] [GO:0006338 "chromatin remodeling" evidence=IBA]
[GO:0007059 "chromosome segregation" evidence=IBA] [GO:0031298
"replication fork protection complex" evidence=IBA] [GO:0042645
"mitochondrial nucleoid" evidence=ISO;IBA] InterPro:IPR001631
InterPro:IPR008336 InterPro:IPR009054 InterPro:IPR011010
InterPro:IPR013030 InterPro:IPR013034 InterPro:IPR013499
InterPro:IPR013500 InterPro:IPR014711 InterPro:IPR014727
Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416 PROSITE:PS00176
SMART:SM00435 RGD:1303177 GO:GO:0005524 GO:GO:0005694 GO:GO:0006260
GO:GO:0042645 GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918
CTD:116447 eggNOG:COG3569 HOGENOM:HOG000105469 KO:K03163
OMA:PEADGCQ OrthoDB:EOG49S667 GO:GO:0003917 Gene3D:1.10.10.41
Gene3D:1.10.132.10 Gene3D:2.170.11.10 Gene3D:3.90.15.10
InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596 SUPFAM:SSF56741
HSSP:P11387 GeneTree:ENSGT00390000016347 EMBL:BK001786
IPI:IPI00366432 RefSeq:NP_001002798.1 UniGene:Rn.31307
ProteinModelPortal:Q6IM78 SMR:Q6IM78 PRIDE:Q6IM78
Ensembl:ENSRNOT00000009965 GeneID:300029 KEGG:rno:300029
UCSC:RGD:1303177 InParanoid:Q6IM78 NextBio:646149
Genevestigator:Q6IM78 Uniprot:Q6IM78
Length = 593
Score = 129 (50.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 23/27 (85%), Positives = 26/27 (96%)
Query: 24 TDKEENKTIALGTSKLNYLDPRISVAW 50
TDKEENK +ALGT+KLNYLDPRIS+AW
Sbjct: 534 TDKEENKQVALGTAKLNYLDPRISIAW 560
>UNIPROTKB|I3LTP0 [details] [associations]
symbol:LOC100628093 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006265 "DNA topological change" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0003918 "DNA
topoisomerase type II (ATP-hydrolyzing) activity" evidence=IEA]
[GO:0003917 "DNA topoisomerase type I activity" evidence=IEA]
InterPro:IPR001631 InterPro:IPR008336 InterPro:IPR009054
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 GO:GO:0005694
GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 GeneTree:ENSGT00390000016347 EMBL:CU655901
Ensembl:ENSSSCT00000029650 OMA:VVINCSX Uniprot:I3LTP0
Length = 605
Score = 129 (50.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 25/48 (52%), Positives = 31/48 (64%)
Query: 3 DKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+K++ L + TDKEE K +ALGTSKLNYLDPRIS+AW
Sbjct: 525 EKRRRRLEKLEEQLVRLGTQATDKEEGKQVALGTSKLNYLDPRISIAW 572
>WB|WBGene00006595 [details] [associations]
symbol:top-1 species:6239 "Caenorhabditis elegans"
[GO:0003917 "DNA topoisomerase type I activity" evidence=IEA;IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006265 "DNA topological change" evidence=IEA]
[GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0008406
"gonad development" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031616 "spindle pole centrosome"
evidence=IDA] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR009054 InterPro:IPR011010 InterPro:IPR013030
InterPro:IPR013034 InterPro:IPR013499 InterPro:IPR013500
InterPro:IPR014711 InterPro:IPR014727 InterPro:IPR018521
Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416 PROSITE:PS00176
SMART:SM00435 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0005730 GO:GO:0008406 GO:GO:0002119 GO:GO:0006260
GO:GO:0018996 GO:GO:0010171 GO:GO:0040011 GO:GO:0048477
GO:GO:0006338 GO:GO:0045132 GO:GO:0031616 GO:GO:0031298
GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918 eggNOG:COG3569
HOGENOM:HOG000105469 KO:K03163 GO:GO:0003917 Gene3D:1.10.10.41
Gene3D:1.10.132.10 Gene3D:2.170.11.10 Gene3D:3.90.15.10
InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596 SUPFAM:SSF56741
HSSP:P11387 GeneTree:ENSGT00390000016347 EMBL:X96762 EMBL:Z93385
PIR:S65469 PIR:T23647 PIR:T23648 RefSeq:NP_001021578.1
RefSeq:NP_493337.1 ProteinModelPortal:O17966 SMR:O17966
STRING:O17966 PaxDb:O17966 PRIDE:O17966 EnsemblMetazoa:M01E5.5a
GeneID:266847 KEGG:cel:CELE_M01E5.5 UCSC:M01E5.5b CTD:266847
WormBase:M01E5.5a WormBase:M01E5.5b InParanoid:O17966 OMA:DESEYST
NextBio:953260 Uniprot:O17966
Length = 806
Score = 126 (49.4 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 23/27 (85%), Positives = 26/27 (96%)
Query: 24 TDKEENKTIALGTSKLNYLDPRISVAW 50
TDK+ENK IALGTSKLNY+DPRI+VAW
Sbjct: 744 TDKDENKQIALGTSKLNYIDPRITVAW 770
>UNIPROTKB|O17966 [details] [associations]
symbol:top-1 "DNA topoisomerase 1" species:6239
"Caenorhabditis elegans" [GO:0031298 "replication fork protection
complex" evidence=IBA] [GO:0006338 "chromatin remodeling"
evidence=IBA] [GO:0006265 "DNA topological change" evidence=IBA]
[GO:0006260 "DNA replication" evidence=IBA] InterPro:IPR001631
InterPro:IPR008336 InterPro:IPR009054 InterPro:IPR011010
InterPro:IPR013030 InterPro:IPR013034 InterPro:IPR013499
InterPro:IPR013500 InterPro:IPR014711 InterPro:IPR014727
InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416
PROSITE:PS00176 SMART:SM00435 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0005730 GO:GO:0008406 GO:GO:0002119
GO:GO:0006260 GO:GO:0018996 GO:GO:0010171 GO:GO:0040011
GO:GO:0048477 GO:GO:0006338 GO:GO:0045132 GO:GO:0031616
GO:GO:0031298 GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918
eggNOG:COG3569 HOGENOM:HOG000105469 KO:K03163 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 HSSP:P11387 GeneTree:ENSGT00390000016347
EMBL:X96762 EMBL:Z93385 PIR:S65469 PIR:T23647 PIR:T23648
RefSeq:NP_001021578.1 RefSeq:NP_493337.1 ProteinModelPortal:O17966
SMR:O17966 STRING:O17966 PaxDb:O17966 PRIDE:O17966
EnsemblMetazoa:M01E5.5a GeneID:266847 KEGG:cel:CELE_M01E5.5
UCSC:M01E5.5b CTD:266847 WormBase:M01E5.5a WormBase:M01E5.5b
InParanoid:O17966 OMA:DESEYST NextBio:953260 Uniprot:O17966
Length = 806
Score = 126 (49.4 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 23/27 (85%), Positives = 26/27 (96%)
Query: 24 TDKEENKTIALGTSKLNYLDPRISVAW 50
TDK+ENK IALGTSKLNY+DPRI+VAW
Sbjct: 744 TDKDENKQIALGTSKLNYIDPRITVAW 770
>TAIR|locus:4515103458 [details] [associations]
symbol:AT4G26701 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003917 "DNA
topoisomerase type I activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005694 "chromosome" evidence=IEA] [GO:0006265
"DNA topological change" evidence=IEA] InterPro:IPR011010
InterPro:IPR014727 InterPro:IPR018521 PROSITE:PS00176 GO:GO:0005694
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161565 GO:GO:0006265
UniGene:At.10511 UniGene:At.73283 SUPFAM:SSF56349 GO:GO:0003917
Gene3D:1.10.132.10 InterPro:IPR025834 Pfam:PF14370 IPI:IPI00892122
RefSeq:NP_001119063.1 ProteinModelPortal:B3H4K2 SMR:B3H4K2
EnsemblPlants:AT4G26701.1 GeneID:6241184 KEGG:ath:AT4G26701
TAIR:At4g26701 eggNOG:NOG317235 HOGENOM:HOG000064570 OMA:HEAPIEK
PhylomeDB:B3H4K2 ProtClustDB:CLSN2925574 Genevestigator:B3H4K2
Uniprot:B3H4K2
Length = 69
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 19/25 (76%), Positives = 24/25 (96%)
Query: 26 KEENKTIALGTSKLNYLDPRISVAW 50
KE+ KT+ALGTSK+NY+DPRI+VAW
Sbjct: 13 KEDLKTVALGTSKINYMDPRITVAW 37
>DICTYBASE|DDB_G0283205 [details] [associations]
symbol:top1 "DNA topoisomerase I" species:44689
"Dictyostelium discoideum" [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0003917 "DNA
topoisomerase type I activity" evidence=IEA;ISS;IBA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006265 "DNA topological change"
evidence=IEA;ISS;IBA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006260 "DNA
replication" evidence=ISS;IBA] [GO:0031298 "replication fork
protection complex" evidence=IBA] [GO:0007059 "chromosome
segregation" evidence=IBA] [GO:0006338 "chromatin remodeling"
evidence=IBA] [GO:0005730 "nucleolus" evidence=IBA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003916 "DNA topoisomerase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001631
InterPro:IPR008336 InterPro:IPR011010 InterPro:IPR013030
InterPro:IPR013034 InterPro:IPR013499 InterPro:IPR013500
InterPro:IPR014711 InterPro:IPR014727 InterPro:IPR018521
Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416 PROSITE:PS00176
SMART:SM00435 dictyBase:DDB_G0283205 GO:GO:0005524 GO:GO:0007059
GO:GO:0005730 GenomeReviews:CM000153_GR GO:GO:0006260 GO:GO:0006338
EMBL:AAFI02000051 GO:GO:0031298 GO:GO:0006265 SUPFAM:SSF56349
GO:GO:0003918 eggNOG:COG3569 KO:K03163 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF56741
HSSP:P11387 RefSeq:XP_639222.1 ProteinModelPortal:Q54RC3 SMR:Q54RC3
STRING:Q54RC3 EnsemblProtists:DDB0234191 GeneID:8623995
KEGG:ddi:DDB_G0283205 OMA:EHQAFLV Uniprot:Q54RC3
Length = 893
Score = 115 (45.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 21/27 (77%), Positives = 25/27 (92%)
Query: 24 TDKEENKTIALGTSKLNYLDPRISVAW 50
T K+E KT+ALGTSK+NYLDPRI+VAW
Sbjct: 836 TGKDELKTVALGTSKINYLDPRITVAW 862
>UNIPROTKB|A8IDM1 [details] [associations]
symbol:TOP1 "DNA topoisomerase I" species:3055
"Chlamydomonas reinhardtii" [GO:0003917 "DNA topoisomerase type I
activity" evidence=IBA] [GO:0005730 "nucleolus" evidence=IBA]
[GO:0006260 "DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0006338 "chromatin
remodeling" evidence=IBA] [GO:0007059 "chromosome segregation"
evidence=IBA] [GO:0031298 "replication fork protection complex"
evidence=IBA] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 GO:GO:0007059
GO:GO:0005730 GO:GO:0006260 GO:GO:0006338 GO:GO:0031298
GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918 eggNOG:COG3569
KO:K03163 GO:GO:0003917 Gene3D:1.10.10.41 Gene3D:1.10.132.10
Gene3D:2.170.11.10 Gene3D:3.90.15.10 InterPro:IPR025834
Pfam:PF14370 SUPFAM:SSF56741 EMBL:DS496116 RefSeq:XP_001703256.1
STRING:A8IDM1 EnsemblPlants:EDP05938 GeneID:5728813
KEGG:cre:CHLREDRAFT_114171 ProtClustDB:CLSN2686978
BioCyc:CHLAMY:CHLREDRAFT_114171-MONOMER Uniprot:A8IDM1
Length = 586
Score = 111 (44.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 3 DKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
DKKK A+ + KE+ KT+ALGTSK+NY+DPRI+VAW
Sbjct: 514 DKKKQAIAKVELQARS-------KEDLKTVALGTSKINYMDPRITVAW 554
>UNIPROTKB|Q84ZL5 [details] [associations]
symbol:OJ1066_B03.125 "Os08g0154600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0003917 "DNA topoisomerase type I
activity" evidence=IBA] [GO:0005730 "nucleolus" evidence=IBA]
[GO:0006260 "DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0006338 "chromatin
remodeling" evidence=IBA] [GO:0007059 "chromosome segregation"
evidence=IBA] [GO:0031298 "replication fork protection complex"
evidence=IBA] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 GO:GO:0007059
GO:GO:0005730 GO:GO:0016020 GO:GO:0006260 GO:GO:0009793
GO:GO:0006338 GO:GO:0009965 EMBL:AP008214 GO:GO:0048645
GO:GO:0009933 GO:GO:0019827 GO:GO:0010075 EMBL:CM000145
GO:GO:0031298 GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918
GO:GO:0048439 eggNOG:COG3569 KO:K03163 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF56741
HSSP:P11387 ProtClustDB:CLSN2686978 EMBL:AP003940
RefSeq:NP_001061015.1 UniGene:Os.21861
EnsemblPlants:LOC_Os08g05840.1 GeneID:4344685 KEGG:osa:4344685
Uniprot:Q84ZL5
Length = 916
Score = 111 (44.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 20/25 (80%), Positives = 24/25 (96%)
Query: 26 KEENKTIALGTSKLNYLDPRISVAW 50
KE+ KT+ALGTSK+NYLDPRI+VAW
Sbjct: 860 KEDLKTVALGTSKINYLDPRITVAW 884
>TAIR|locus:2173862 [details] [associations]
symbol:TOP1BETA "DNA topoisomerase 1 beta" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003917 "DNA topoisomerase type I activity"
evidence=IEA;ISS;IBA] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005694 "chromosome" evidence=IEA] [GO:0006265
"DNA topological change" evidence=IEA;IC;IBA] [GO:0031490
"chromatin DNA binding" evidence=IBA] [GO:0016020 "membrane"
evidence=IDA] [GO:0001676 "long-chain fatty acid metabolic process"
evidence=RCA] [GO:0002213 "defense response to insect"
evidence=RCA] [GO:0006633 "fatty acid biosynthetic process"
evidence=RCA] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 EMBL:CP002688
GO:GO:0005694 GO:GO:0016020 GO:GO:0031490 GO:GO:0006265
EMBL:AB015479 SUPFAM:SSF56349 GO:GO:0003918 HOGENOM:HOG000105469
KO:K03163 GO:GO:0003917 Gene3D:1.10.10.41 Gene3D:1.10.132.10
Gene3D:2.170.11.10 Gene3D:3.90.15.10 InterPro:IPR025834
Pfam:PF14370 SUPFAM:SSF56741 HSSP:P11387 OMA:LGKNHII
ProtClustDB:CLSN2686978 EMBL:AK226832 IPI:IPI00524700
RefSeq:NP_200342.1 UniGene:At.6889 ProteinModelPortal:Q9FJ79
SMR:Q9FJ79 STRING:Q9FJ79 PRIDE:Q9FJ79 EnsemblPlants:AT5G55310.1
GeneID:835624 KEGG:ath:AT5G55310 TAIR:At5g55310 InParanoid:Q9FJ79
PhylomeDB:Q9FJ79 Genevestigator:Q9FJ79 Uniprot:Q9FJ79
Length = 917
Score = 110 (43.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 19/25 (76%), Positives = 24/25 (96%)
Query: 26 KEENKTIALGTSKLNYLDPRISVAW 50
KE+ KT+ALGTSK+NY+DPRI+VAW
Sbjct: 855 KEDMKTVALGTSKINYMDPRITVAW 879
>UNIPROTKB|Q24BB2 [details] [associations]
symbol:TTHERM_01299650 "Eukaryotic DNA topoisomerase I,
catalytic core family protein" species:312017 "Tetrahymena
thermophila SB210" [GO:0003917 "DNA topoisomerase type I activity"
evidence=IBA] [GO:0005730 "nucleolus" evidence=IBA] [GO:0006260
"DNA replication" evidence=IBA] [GO:0006265 "DNA topological
change" evidence=IBA] [GO:0006338 "chromatin remodeling"
evidence=IBA] [GO:0007059 "chromosome segregation" evidence=IBA]
[GO:0031298 "replication fork protection complex" evidence=IBA]
InterPro:IPR001631 InterPro:IPR008336 InterPro:IPR011010
InterPro:IPR013030 InterPro:IPR013034 InterPro:IPR013499
InterPro:IPR013500 InterPro:IPR014711 InterPro:IPR014727
Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416 SMART:SM00435
GO:GO:0007059 GO:GO:0005730 GO:GO:0006260 GO:GO:0006338
GO:GO:0031298 GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918 KO:K03163
GO:GO:0003917 Gene3D:1.10.10.41 Gene3D:1.10.132.10
Gene3D:2.170.11.10 Gene3D:3.90.15.10 InterPro:IPR025834
Pfam:PF14370 SUPFAM:SSF56741 EMBL:GG662422 RefSeq:XP_001025304.1
UniGene:Tth.28266 ProteinModelPortal:Q24BB2 SMR:Q24BB2
EnsemblProtists:EAS05059 GeneID:7824310 KEGG:tet:TTHERM_01299650
ProtClustDB:CLSZ2499870 Uniprot:Q24BB2
Length = 713
Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
Identities = 20/25 (80%), Positives = 21/25 (84%)
Query: 26 KEENKTIALGTSKLNYLDPRISVAW 50
KE+NK IALGTSK NY DPRISV W
Sbjct: 657 KEKNKEIALGTSKTNYNDPRISVVW 681
>UNIPROTKB|Q7RE42 [details] [associations]
symbol:PY05226 "Eukaryotic DNA topoisomerase I, DNA
binding, putative" species:73239 "Plasmodium yoelii yoelii"
[GO:0003917 "DNA topoisomerase type I activity" evidence=IBA]
[GO:0005730 "nucleolus" evidence=IBA] [GO:0006260 "DNA replication"
evidence=IBA] [GO:0006265 "DNA topological change" evidence=IBA]
[GO:0006338 "chromatin remodeling" evidence=IBA] [GO:0007059
"chromosome segregation" evidence=IBA] [GO:0031298 "replication
fork protection complex" evidence=IBA] InterPro:IPR001631
InterPro:IPR008336 InterPro:IPR011010 InterPro:IPR013030
InterPro:IPR013034 InterPro:IPR013499 InterPro:IPR013500
InterPro:IPR014711 InterPro:IPR014727 InterPro:IPR018521
Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416 PROSITE:PS00176
SMART:SM00435 GO:GO:0007059 GO:GO:0005730 GO:GO:0006260
GO:GO:0006338 GO:GO:0031298 GO:GO:0006265 SUPFAM:SSF56349
GO:GO:0003918 eggNOG:COG3569 KO:K03163 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF56741
HSSP:P11387 EMBL:AABL01001646 RefSeq:XP_725660.1
ProteinModelPortal:Q7RE42 SMR:Q7RE42 STRING:Q7RE42 GeneID:3790999
KEGG:pyo:PY05226 EuPathDB:PlasmoDB:PY05226 Uniprot:Q7RE42
Length = 886
Score = 103 (41.3 bits), Expect = 0.00020, P = 0.00020
Identities = 18/25 (72%), Positives = 25/25 (100%)
Query: 26 KEENKTIALGTSKLNYLDPRISVAW 50
+++NKTIALGTSK+NY+DPRI+VA+
Sbjct: 830 RDDNKTIALGTSKINYMDPRITVAF 854
>ASPGD|ASPL0000055668 [details] [associations]
symbol:top1 species:162425 "Emericella nidulans"
[GO:0003917 "DNA topoisomerase type I activity" evidence=IDA]
[GO:0006265 "DNA topological change" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0031298 "replication fork protection
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006268 "DNA unwinding involved in replication" evidence=IEA]
[GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006271 "DNA strand elongation involved in DNA
replication" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000019 "regulation of mitotic recombination"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0042790 "transcription of nuclear large rRNA
transcript from RNA polymerase I promoter" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] InterPro:IPR001631
InterPro:IPR008336 InterPro:IPR011010 InterPro:IPR013030
InterPro:IPR013034 InterPro:IPR013499 InterPro:IPR013500
InterPro:IPR014711 InterPro:IPR014727 InterPro:IPR018521
Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416 PROSITE:PS00176
SMART:SM00435 GO:GO:0007059 GO:GO:0005730 EMBL:BN001308
GO:GO:0006260 GO:GO:0006338 GO:GO:0031298 EMBL:AACD01000005
GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918 HOGENOM:HOG000105469
KO:K03163 GO:GO:0003917 Gene3D:1.10.10.41 Gene3D:1.10.132.10
Gene3D:2.170.11.10 Gene3D:3.90.15.10 InterPro:IPR025834
Pfam:PF14370 SUPFAM:SSF56741 OrthoDB:EOG4BK8C3 RefSeq:XP_657857.1
ProteinModelPortal:Q5BGS7 SMR:Q5BGS7 STRING:Q5BGS7
EnsemblFungi:CADANIAT00002471 GeneID:2876031 KEGG:ani:AN0253.2
OMA:QGQVKYI Uniprot:Q5BGS7
Length = 871
Score = 102 (41.0 bits), Expect = 0.00025, P = 0.00025
Identities = 17/26 (65%), Positives = 24/26 (92%)
Query: 25 DKEENKTIALGTSKLNYLDPRISVAW 50
DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 813 DKEDNKEVALGTSKINYIDPRLTVVF 838
>UNIPROTKB|Q5BGS7 [details] [associations]
symbol:AN0253.2 "Topoisomerase I
[Source:UniProtKB/TrEMBL;Acc:Q875K2]" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0003917 "DNA topoisomerase type I activity"
evidence=IBA] [GO:0005730 "nucleolus" evidence=IBA] [GO:0006260
"DNA replication" evidence=IBA] [GO:0006265 "DNA topological
change" evidence=IBA] [GO:0006338 "chromatin remodeling"
evidence=IBA] [GO:0007059 "chromosome segregation" evidence=IBA]
[GO:0031298 "replication fork protection complex" evidence=IBA]
InterPro:IPR001631 InterPro:IPR008336 InterPro:IPR011010
InterPro:IPR013030 InterPro:IPR013034 InterPro:IPR013499
InterPro:IPR013500 InterPro:IPR014711 InterPro:IPR014727
InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416
PROSITE:PS00176 SMART:SM00435 GO:GO:0007059 GO:GO:0005730
EMBL:BN001308 GO:GO:0006260 GO:GO:0006338 GO:GO:0031298
EMBL:AACD01000005 GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918
HOGENOM:HOG000105469 KO:K03163 GO:GO:0003917 Gene3D:1.10.10.41
Gene3D:1.10.132.10 Gene3D:2.170.11.10 Gene3D:3.90.15.10
InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF56741 OrthoDB:EOG4BK8C3
RefSeq:XP_657857.1 ProteinModelPortal:Q5BGS7 SMR:Q5BGS7
STRING:Q5BGS7 EnsemblFungi:CADANIAT00002471 GeneID:2876031
KEGG:ani:AN0253.2 OMA:QGQVKYI Uniprot:Q5BGS7
Length = 871
Score = 102 (41.0 bits), Expect = 0.00025, P = 0.00025
Identities = 17/26 (65%), Positives = 24/26 (92%)
Query: 25 DKEENKTIALGTSKLNYLDPRISVAW 50
DKE+NK +ALGTSK+NY+DPR++V +
Sbjct: 813 DKEDNKEVALGTSKINYIDPRLTVVF 838
>UNIPROTKB|Q75CB7 [details] [associations]
symbol:AGOS_ACL008C "ACL008Cp" species:284811 "Ashbya
gossypii ATCC 10895" [GO:0003917 "DNA topoisomerase type I
activity" evidence=IBA] [GO:0005730 "nucleolus" evidence=IBA]
[GO:0006260 "DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0006338 "chromatin
remodeling" evidence=IBA] [GO:0007059 "chromosome segregation"
evidence=IBA] [GO:0031298 "replication fork protection complex"
evidence=IBA] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 GO:GO:0007059
GO:GO:0005730 GO:GO:0006260 GO:GO:0006338 GO:GO:0031298
EMBL:AE016816 GenomeReviews:AE016816_GR GO:GO:0006265
SUPFAM:SSF56349 GO:GO:0003918 HOGENOM:HOG000105469 KO:K03163
GO:GO:0003917 Gene3D:1.10.10.41 Gene3D:1.10.132.10
Gene3D:2.170.11.10 Gene3D:3.90.15.10 InterPro:IPR025834
Pfam:PF14370 SUPFAM:SSF56741 OrthoDB:EOG4BK8C3 RefSeq:NP_983396.2
STRING:Q75CB7 EnsemblFungi:AAS51220 GeneID:4619521
KEGG:ago:AGOS_ACL008C Uniprot:Q75CB7
Length = 732
Score = 101 (40.6 bits), Expect = 0.00026, P = 0.00026
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 3 DKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW 50
+K K + + DKE+N T+AL TSK++Y+DPR+SVA+
Sbjct: 652 EKLKAQIDKLEQRIRTTSIQMKDKEDNSTVALSTSKISYIDPRLSVAF 699
>SGD|S000005366 [details] [associations]
symbol:TOP1 "Topoisomerase I" species:4932 "Saccharomyces
cerevisiae" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003917
"DNA topoisomerase type I activity" evidence=IEA;IMP;IDA]
[GO:0003918 "DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006265
"DNA topological change" evidence=IEA;IMP;IDA] [GO:0031490
"chromatin DNA binding" evidence=IBA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003916 "DNA topoisomerase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;IPI] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0000183 "chromatin silencing at
rDNA" evidence=IMP] [GO:0000019 "regulation of mitotic
recombination" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IGI;IMP] [GO:0007097 "nuclear migration"
evidence=IGI;IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IMP] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0031298 "replication fork
protection complex" evidence=IDA] [GO:0006271 "DNA strand
elongation involved in DNA replication" evidence=IMP] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919
PRINTS:PR00416 PROSITE:PS00176 SMART:SM00435 SGD:S000005366
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 EMBL:BK006948
GO:GO:0006357 GO:GO:0006333 GO:GO:0000183 GO:GO:0006368
GO:GO:0007076 GO:GO:0031490 GO:GO:0007097 GO:GO:0006271
GO:GO:0031298 GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918
GO:GO:0000019 eggNOG:COG3569 HOGENOM:HOG000105469 KO:K03163
GO:GO:0003917 Gene3D:1.10.10.41 Gene3D:1.10.132.10
Gene3D:2.170.11.10 Gene3D:3.90.15.10 InterPro:IPR025834
Pfam:PF14370 SUPFAM:SSF56741 GeneTree:ENSGT00390000016347
OrthoDB:EOG4BK8C3 EMBL:K03077 EMBL:Z74748 PIR:A23161
RefSeq:NP_014637.1 PDB:1OIS PDBsum:1OIS ProteinModelPortal:P04786
SMR:P04786 DIP:DIP-1705N IntAct:P04786 MINT:MINT-386768
STRING:P04786 PaxDb:P04786 PeptideAtlas:P04786 EnsemblFungi:YOL006C
GeneID:854156 KEGG:sce:YOL006C CYGD:YOL006c OMA:HIDNIRT
ChEMBL:CHEMBL5948 EvolutionaryTrace:P04786 NextBio:975920
Genevestigator:P04786 GermOnline:YOL006C Uniprot:P04786
Length = 769
Score = 100 (40.3 bits), Expect = 0.00035, P = 0.00035
Identities = 17/26 (65%), Positives = 23/26 (88%)
Query: 25 DKEENKTIALGTSKLNYLDPRISVAW 50
DKEEN ++LGTSK+NY+DPR+SV +
Sbjct: 711 DKEENSQVSLGTSKINYIDPRLSVVF 736
>POMBASE|SPBC1703.14c [details] [associations]
symbol:top1 "DNA topoisomerase I" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003917
"DNA topoisomerase type I activity" evidence=ISO;IMP] [GO:0003918
"DNA topoisomerase type II (ATP-hydrolyzing) activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006265 "DNA topological
change" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IGI] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0007076 "mitotic chromosome condensation"
evidence=ISO] [GO:0042790 "transcription of nuclear large rRNA
transcript from RNA polymerase I promoter" evidence=IGI]
InterPro:IPR001631 InterPro:IPR008336 InterPro:IPR011010
InterPro:IPR013030 InterPro:IPR013034 InterPro:IPR013499
InterPro:IPR013500 InterPro:IPR014711 InterPro:IPR014727
InterPro:IPR018521 Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416
PROSITE:PS00176 SMART:SM00435 PomBase:SPBC1703.14c GO:GO:0005829
GO:GO:0005524 GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0000790 GO:GO:0006333 GO:GO:0007076 GO:GO:0042790
GO:GO:0006265 SUPFAM:SSF56349 GO:GO:0003918 eggNOG:COG3569
HOGENOM:HOG000105469 KO:K03163 GO:GO:0003917 Gene3D:1.10.10.41
Gene3D:1.10.132.10 Gene3D:2.170.11.10 Gene3D:3.90.15.10
InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF56741 EMBL:X06201
PIR:S03329 PIR:T50327 RefSeq:NP_596209.1 ProteinModelPortal:P07799
SMR:P07799 STRING:P07799 EnsemblFungi:SPBC1703.14c.1 GeneID:2540032
KEGG:spo:SPBC1703.14c OMA:EQVGNFR OrthoDB:EOG4BK8C3
NextBio:20801174 Uniprot:P07799
Length = 814
Score = 100 (40.3 bits), Expect = 0.00038, P = 0.00038
Identities = 17/26 (65%), Positives = 24/26 (92%)
Query: 25 DKEENKTIALGTSKLNYLDPRISVAW 50
DK+ENKT ALGTSK+NY+DPR++ ++
Sbjct: 757 DKDENKTTALGTSKINYIDPRLTYSF 782
>UNIPROTKB|Q7S0F7 [details] [associations]
symbol:NCU09118 "DNA topoisomerase I" species:367110
"Neurospora crassa OR74A" [GO:0003917 "DNA topoisomerase type I
activity" evidence=IBA] [GO:0005730 "nucleolus" evidence=IBA]
[GO:0006260 "DNA replication" evidence=IBA] [GO:0006265 "DNA
topological change" evidence=IBA] [GO:0006338 "chromatin
remodeling" evidence=IBA] [GO:0007059 "chromosome segregation"
evidence=IBA] [GO:0031298 "replication fork protection complex"
evidence=IBA] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR011010 InterPro:IPR013030 InterPro:IPR013034
InterPro:IPR013499 InterPro:IPR013500 InterPro:IPR014711
InterPro:IPR014727 Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416
SMART:SM00435 GO:GO:0007059 GO:GO:0005730 GO:GO:0006260
GO:GO:0006338 GO:GO:0031298 GO:GO:0006265 SUPFAM:SSF56349
GO:GO:0003918 eggNOG:COG3569 HOGENOM:HOG000105469 KO:K03163
GO:GO:0003917 Gene3D:1.10.10.41 Gene3D:1.10.132.10
Gene3D:2.170.11.10 Gene3D:3.90.15.10 InterPro:IPR025834
Pfam:PF14370 SUPFAM:SSF56741 OrthoDB:EOG4BK8C3 EMBL:AABX02000029
RefSeq:XP_958033.2 UniGene:Ncr.25536 ProteinModelPortal:Q7S0F7
SMR:Q7S0F7 STRING:Q7S0F7 EnsemblFungi:EFNCRT00000006491
GeneID:3874180 KEGG:ncr:NCU09118 OMA:LGKNHII Uniprot:Q7S0F7
Length = 874
Score = 99 (39.9 bits), Expect = 0.00053, P = 0.00053
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 3 DKKKTALGRXXXXXXXXXXXXTDKEENKTIALGTSKLNYLDPRISVAW---YNLGFD-FY 58
+K + AL + D+E NK +ALGTSK+NY+DPR++V + +N+ + F+
Sbjct: 792 EKLEAALEKLDQRIKNLELQSADREGNKEVALGTSKINYIDPRLTVVFSAKFNVPIEKFF 851
Query: 59 NWSGKTKKVIKVES 72
+ + + K +ES
Sbjct: 852 SKTLREKFKWAIES 865
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 102 90 0.00091 102 3 11 23 0.39 30
29 0.39 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 528 (56 KB)
Total size of DFA: 110 KB (2074 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:05
No. of threads or processors used: 24
Search cpu time: 8.48u 0.08s 8.56t Elapsed: 00:00:17
Total cpu time: 8.49u 0.08s 8.57t Elapsed: 00:00:22
Start: Thu Aug 15 14:04:56 2013 End: Thu Aug 15 14:05:18 2013