Query psy5984
Match_columns 512
No_of_seqs 393 out of 2584
Neff 6.5
Searched_HMMs 46136
Date Fri Aug 16 23:36:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5984.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5984hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd00764 Eukaryotic_PFK Phospho 100.0 1.7E-91 3.7E-96 776.8 30.4 472 1-510 214-731 (762)
2 TIGR02478 6PF1K_euk 6-phosphof 100.0 2E-83 4.4E-88 715.8 31.5 474 1-511 211-732 (745)
3 KOG2440|consensus 100.0 1.3E-60 2.7E-65 514.8 18.6 403 1-458 205-665 (666)
4 cd00764 Eukaryotic_PFK Phospho 100.0 3.8E-53 8.3E-58 470.7 15.2 298 193-492 2-588 (762)
5 TIGR02478 6PF1K_euk 6-phosphof 100.0 2.9E-50 6.2E-55 449.7 15.0 296 195-492 1-588 (745)
6 PTZ00287 6-phosphofructokinase 100.0 2.6E-38 5.7E-43 362.6 24.5 168 322-491 836-1038(1419)
7 PTZ00468 phosphofructokinase f 100.0 7.5E-35 1.6E-39 332.2 27.1 417 1-492 299-916 (1328)
8 TIGR02482 PFKA_ATP 6-phosphofr 100.0 1.9E-33 4.2E-38 285.8 12.3 254 196-493 1-300 (301)
9 cd00763 Bacterial_PFK Phosphof 100.0 4.1E-33 8.9E-38 285.5 11.3 257 195-495 1-300 (317)
10 PTZ00286 6-phospho-1-fructokin 100.0 1.7E-32 3.6E-37 292.0 10.7 282 193-510 86-432 (459)
11 COG0205 PfkA 6-phosphofructoki 100.0 3E-32 6.5E-37 280.1 11.5 171 323-493 3-198 (347)
12 PRK03202 6-phosphofructokinase 100.0 4.6E-32 9.9E-37 278.1 12.0 252 195-494 2-300 (320)
13 cd00763 Bacterial_PFK Phosphof 100.0 3.6E-32 7.8E-37 278.5 10.5 170 323-492 1-194 (317)
14 PLN02884 6-phosphofructokinase 100.0 3.8E-32 8.2E-37 286.0 10.4 278 194-510 53-399 (411)
15 TIGR02482 PFKA_ATP 6-phosphofr 100.0 4.4E-32 9.5E-37 275.9 10.3 170 324-493 1-195 (301)
16 PRK14071 6-phosphofructokinase 100.0 1.4E-31 3E-36 278.8 11.6 264 194-495 4-336 (360)
17 PRK03202 6-phosphofructokinase 100.0 2.6E-31 5.6E-36 272.6 10.9 170 323-492 2-195 (320)
18 TIGR02483 PFK_mixed phosphofru 100.0 3.3E-31 7.1E-36 272.4 11.3 169 324-492 1-196 (324)
19 TIGR02483 PFK_mixed phosphofru 100.0 2.4E-31 5.2E-36 273.4 10.3 259 196-493 1-323 (324)
20 PF00365 PFK: Phosphofructokin 100.0 9.8E-32 2.1E-36 271.8 6.7 170 323-492 1-195 (282)
21 cd00363 PFK Phosphofructokinas 100.0 6.6E-31 1.4E-35 272.0 12.3 278 195-510 1-334 (338)
22 PLN02884 6-phosphofructokinase 100.0 7.6E-31 1.7E-35 276.2 11.4 167 323-491 54-252 (411)
23 PRK14071 6-phosphofructokinase 100.0 1.4E-30 3E-35 271.3 12.2 170 323-492 5-210 (360)
24 cd00363 PFK Phosphofructokinas 100.0 8.5E-31 1.9E-35 271.2 9.8 171 323-493 1-201 (338)
25 COG0205 PfkA 6-phosphofructoki 100.0 2E-30 4.4E-35 266.6 12.0 253 194-494 2-313 (347)
26 PF00365 PFK: Phosphofructokin 100.0 4.4E-31 9.6E-36 267.0 7.0 240 195-455 1-282 (282)
27 PRK14072 6-phosphofructokinase 100.0 2.5E-30 5.3E-35 273.9 10.7 168 323-491 4-218 (416)
28 PRK06830 diphosphate--fructose 100.0 5.4E-30 1.2E-34 271.5 11.5 269 193-495 79-415 (443)
29 PLN02564 6-phosphofructokinase 100.0 5.1E-30 1.1E-34 272.7 11.0 168 323-492 88-286 (484)
30 PRK06830 diphosphate--fructose 100.0 7.3E-30 1.6E-34 270.5 10.7 169 323-493 81-283 (443)
31 PTZ00286 6-phospho-1-fructokin 100.0 1.5E-29 3.1E-34 269.6 10.7 168 323-492 88-286 (459)
32 PRK06555 pyrophosphate--fructo 100.0 1.5E-29 3.2E-34 264.5 9.7 170 323-492 4-241 (403)
33 PRK14072 6-phosphofructokinase 99.9 4.1E-27 8.9E-32 249.4 15.9 160 1-176 211-405 (416)
34 PLN02564 6-phosphofructokinase 99.9 1.6E-26 3.4E-31 246.0 17.8 152 1-173 278-456 (484)
35 TIGR02477 PFKA_PPi diphosphate 99.9 1.2E-26 2.7E-31 251.5 9.2 170 323-492 68-272 (539)
36 PRK07085 diphosphate--fructose 99.9 2E-26 4.4E-31 250.2 9.2 169 323-491 71-274 (555)
37 KOG2440|consensus 99.9 8.4E-26 1.8E-30 245.1 12.6 168 324-491 374-571 (666)
38 cd00765 Pyrophosphate_PFK Phos 99.9 3.2E-26 7E-31 247.9 9.2 171 323-493 73-278 (550)
39 PLN02251 pyrophosphate-depende 99.9 1E-25 2.2E-30 244.5 10.1 169 323-491 97-300 (568)
40 PLN03028 pyrophosphate--fructo 99.9 7.8E-26 1.7E-30 247.1 8.9 169 323-491 80-283 (610)
41 PRK06555 pyrophosphate--fructo 99.9 7.2E-25 1.6E-29 229.3 15.3 139 1-157 233-398 (403)
42 PTZ00287 6-phosphofructokinase 99.9 3.1E-25 6.7E-30 255.5 8.9 169 323-491 178-381 (1419)
43 PTZ00468 phosphofructokinase f 99.9 7E-25 1.5E-29 251.0 9.3 169 323-491 103-306 (1328)
44 PRK07085 diphosphate--fructose 99.8 1.2E-20 2.6E-25 205.4 11.4 149 194-343 70-261 (555)
45 TIGR02477 PFKA_PPi diphosphate 99.8 2.4E-19 5.2E-24 194.9 11.6 151 193-344 66-259 (539)
46 PLN03028 pyrophosphate--fructo 99.8 1.8E-18 3.8E-23 189.6 11.6 145 194-339 79-266 (610)
47 cd00765 Pyrophosphate_PFK Phos 99.8 4.1E-18 8.9E-23 185.1 13.0 148 193-341 71-261 (550)
48 PLN02251 pyrophosphate-depende 99.6 7.6E-15 1.7E-19 160.1 13.6 129 1-138 293-504 (568)
49 COG2910 Putative NADH-flavin r 55.9 86 0.0019 30.6 9.0 92 323-424 1-109 (211)
50 TIGR01918 various_sel_PB selen 43.3 71 0.0015 34.7 7.1 26 194-219 125-150 (431)
51 TIGR01917 gly_red_sel_B glycin 41.7 96 0.0021 33.7 7.7 26 194-219 125-150 (431)
52 PF04198 Sugar-bind: Putative 39.5 32 0.0007 34.5 3.7 141 57-214 6-163 (255)
53 PRK00561 ppnK inorganic polyph 31.6 45 0.00098 33.8 3.3 30 401-430 18-52 (259)
54 PRK14075 pnk inorganic polypho 27.5 73 0.0016 32.1 4.0 48 411-458 41-92 (256)
55 PRK04761 ppnK inorganic polyph 25.7 74 0.0016 32.0 3.6 18 413-430 27-44 (246)
56 KOG2336|consensus 25.3 5.6E+02 0.012 26.6 9.6 81 399-479 136-238 (422)
57 COG2390 DeoR Transcriptional r 24.8 2.5E+02 0.0055 29.4 7.5 137 57-207 67-220 (321)
58 cd07995 TPK Thiamine pyrophosp 24.3 2.8E+02 0.0061 26.7 7.3 75 353-427 23-106 (208)
No 1
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=100.00 E-value=1.7e-91 Score=776.84 Aligned_cols=472 Identities=43% Similarity=0.666 Sum_probs=382.7
Q ss_pred CEEEeCCCccC---c-ccccccccCCchhhHHHHHHHcCCCcEEEEEeCCCccCCCCcccHHHHHHHHHHhcCCceeEEe
Q psy5984 1 TWPFQPLWPRK---Q-ILCSPLNGLPKSTGRLACERTAGQRLNIIIVAEGAIDRDGKPITAEKVKEVVVENLKQDTRITV 76 (512)
Q Consensus 1 d~iliPE~p~~---~-~~~~~~~~~~~~~~~i~~~~~~gk~~~iIvVAEG~~d~~g~~i~~~~l~~~i~~~~g~~~R~t~ 76 (512)
|+|||||.|++ . +||+ .+++++++||+++|||||||++|++|+++++++|++.|++++|+|+|+++
T Consensus 214 d~ilIPE~p~~~~~~~~i~~----------~l~~~~~~gk~~~iIVVaEGa~d~~g~~i~~~~l~~~l~~~~g~d~R~t~ 283 (762)
T cd00764 214 DWIFIPERPPEDGWEDQMCR----------RLSEHRSRGKRLNIIIVAEGAIDDQLKPITSEDVKDLVVERLGLDTRVTT 283 (762)
T ss_pred CEEEecCCCCchhHHHHHHH----------HHHHHHhcCCCcEEEEEeCCCccccCCCccHHHHHHHHHHhcCCCeeEee
Confidence 79999999998 3 8888 99999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCCeeEEechHHHHhhcccchHhhhHHHHHHHHHhcC
Q psy5984 77 LGHVQRGGSPSAFDRVLGCRMGAEAVMALMEATPGTEPCVMSLDGNQAVRLPLMECVEKTKAVAKAMADKQWDLAVQLRG 156 (512)
Q Consensus 77 LGh~QRgG~Psa~Dr~la~~~G~~AV~~l~~g~~~~~~~mv~i~~~~i~~vpl~e~~~~~k~v~~~~~~~~~~~a~~l~g 156 (512)
|||+||||+||++||++|++||++||+++++|+++++++||++++|+++++||+++++.+|.|.++|++++|+.|++|||
T Consensus 284 LGh~QRGG~Psa~Dr~la~~~G~~AV~~l~~g~~~~~~~~i~~~~~~i~~~pl~e~v~~~k~v~~~~~~~~~~~a~~lr~ 363 (762)
T cd00764 284 LGHVQRGGTPSAFDRILASLMGVEAVMALLEATPDTPACVVSLNGNKAVRLPLMECVQLTKDVQKAMDEKRFDEAAALRG 363 (762)
T ss_pred cChhhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCEEEEEEHHHHHhhccchhhhhhhhhHHHHHHhcc
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccchHHhhhhhhccCCCCCCcccccCCCCcceEEEEeeCCCCCCchHHHHHHHHhcCCcc---c-eeccccc
Q psy5984 157 RQVFPHPSFARNLETYKMLTRLKPPKSAFDEMGRGLEGYTLAVMHIGAPACGMNAAVRSFCNDNYNTD---F-IYRLYSE 232 (512)
Q Consensus 157 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iai~~~G~~a~GMNaa~ra~~~~~~~~~---~-i~~~~~~ 232 (512)
. +|.+++++|+.++.++++.. |+. +++||||||+||||||||+|+|++|+.+++++ + +++||.|
T Consensus 364 ~------~f~~~~~~~~~~~~~~~~~~--~~~----~~~~IaIltsGG~apGmNaairavv~~a~~~g~~v~gi~~G~~G 431 (762)
T cd00764 364 K------SFDKNWNLYKLLAIELPQPL--PEK----TNLNIAIVNVGAPAAGMNAAVRSAVRYGLAHGHRPYAIYDGFEG 431 (762)
T ss_pred h------hHHHHHHHHHhccccCCccC--Ccc----cccEEEEEecCCCchhHHHHHHHHHHHHHHCCCEEEEEecCHHH
Confidence 9 99999999999999865433 222 57999999999999999999999999887666 3 7888876
Q ss_pred cCCccc--ceeeeecccccccCcccccCcchhHHH-------------------HHHHHHHHhHHHHHHhHhhhhcCCcc
Q psy5984 233 EGKGLF--SARQNVLGHMQQGGSPSPFDRNMGTKQ-------------------AANTAYQAGIQLVEARSDYKEFCIPM 291 (512)
Q Consensus 233 ~~~g~~--~~~~~V~G~~~rGGs~~~~~R~~~~~~-------------------~~~~~~~a~~~L~~a~~~y~~~~ipm 291 (512)
+.++.+ .+|.+|.+|.++|||.++|.|..+... |+++.|.++.+|.+++++||+|+|||
T Consensus 432 L~~~~~~~l~~~~v~~~~~~GGt~LGT~R~~~~~~~~~i~~~l~~~~Id~LivIGGdgs~~~a~~L~~~~~~y~~~~i~v 511 (762)
T cd00764 432 LAKGQIVELGWIDVGGWTGRGGSELGTKRTLPKKDLETIAYNFQKYGIDGLIIVGGFEAYKGLLQLREAREQYEEFCIPM 511 (762)
T ss_pred hcCCCcccCCHHHHHHHHhCCcccccccCCCcHHHHHHHHHHHHHcCCCEEEEECChhHHHHHHHHHHHHhhCCCCCccE
Confidence 654422 479999999999999999999876331 23678999999999999999999999
Q ss_pred cccccccccCCCCceeeccccCccccccccc-----------ceEEEEecCCCcchhhHHHHHHHHHHHHcCC-EEEEEe
Q psy5984 292 VVIPSTISNNVPGTEFSLGCDTALNEITEEG-----------YTLAVMHIGAPACGMNAAVRSFVRNCIYRGD-TVIGIH 359 (512)
Q Consensus 292 v~iPatIsNnvpgte~slG~DTaln~~~~~~-----------~~iaIi~sGg~apG~NAair~~v~~~~~~G~-~v~g~~ 359 (512)
|+||+|||||+||||||+|+|||+|.+++++ .|++|+.+-|-.||.-|...+++. |. -+|-.+
T Consensus 512 VgIPkTIDNDv~gTd~siGfdTAln~~~~~id~i~~tA~s~~~RvfVVEvMGR~~G~LA~~aglA~-----GAd~i~iPE 586 (762)
T cd00764 512 VLIPATVSNNVPGTDFSLGSDTALNALMKYCDRIKQSASGTKRRVFIVETMGGYCGYLATMTGLAV-----GADAAYVFE 586 (762)
T ss_pred EEecccccCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHhhcCCeEEEEEeCCCCccHHHHHHHhhc-----CCCEEEeCC
Confidence 9999999999999999999999999988763 366777776666666665444331 21 222222
Q ss_pred cchh--hhcccceEecChhccccccccCCceeecccCCCCCcHHHHHHHHHHcCCceEEEecCccc---hhhhhhhcCCC
Q psy5984 360 DGVE--GLVAGNVQIMQWSDVTGWVGQGGAMLGTKRTLPEKKLPQIAAKLKELKIQALLIIGGFED---EQGHMQQGGSP 434 (512)
Q Consensus 360 ~G~~--GL~~g~~~~l~~~~v~~~~~~GGsiLgt~R~~p~~~~~~i~~~l~~~~i~~LvviGGf~s---~lGh~QqGG~P 434 (512)
..|. .|. .++..+. +.+.. ...-|..+.............+.+.+.++. + ++|++ .|||+||||.|
T Consensus 587 ~~~~~~~l~-~dv~~l~-~~~~~-~~~~g~~~~~~~~se~~~~~~~~~~~~~~~-~-----~~~~~R~~vLGh~QrGG~P 657 (762)
T cd00764 587 EPFNIRDLQ-ENVEHLT-EKMKT-TIGRGLVLRNEKCNENYTTVFTYELYSEEG-K-----GVFDCRTNVLGHVQQGGAP 657 (762)
T ss_pred CCCCHHHHH-HHHHHHH-HHHHH-HHhcCCeEeeeeeecCCccccHHHHHHHHH-h-----cCCceEecccccccCCCCC
Confidence 2221 110 0000000 00000 011122222211111111222334344332 1 36775 69999999999
Q ss_pred ccccCchhHHHHHHHHHHHHHHHhhhcCCCCceeecCCCcEEEEEeecCceeEeeccchhhhcCcccCCCcccCCC
Q psy5984 435 SPFDRNMGTKQAANTVEWMIDQLKKCTKPDGSVFTDSPETAVLMGVIRRQYCFTPLQTLKKETNFECKSCNGQTSQ 510 (512)
Q Consensus 435 stiDr~lG~~tA~~ai~~l~~~l~~~a~s~~rv~~~~~~~a~vigl~g~~~~~~Pl~~l~~~~d~~~r~~~~~ww~ 510 (512)
+|+||.+|++++++|++++.++++.. ..++++|.+++++|+++|++++++.|+|+.+|++++ |+||+||+|||+
T Consensus 658 s~~DR~latr~g~~Av~~l~~~~~~~-~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~-~~~r~p~~~~w~ 731 (762)
T cd00764 658 SPFDRNFGTKFAVKAMKWIEQKLKEN-YAAGNEFANDPDFNCVNGVKKYAVLFEPVEELKQTT-FEHRIPKEQWWL 731 (762)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhh-hcccccccCCCCceEEEEEeCCEEEEeeHHHHHHhh-hhcCCCcchhhH
Confidence 99999999999999999999999877 445678888899999999999999999999999966 999999999997
No 2
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).
Probab=100.00 E-value=2e-83 Score=715.77 Aligned_cols=474 Identities=42% Similarity=0.601 Sum_probs=380.4
Q ss_pred CEEEeCCCccC---c-ccccccccCCchhhHHHHHHHcCCCcEEEEEeCCCccCCCCcccHHHHHHHHHHhcCCceeEEe
Q psy5984 1 TWPFQPLWPRK---Q-ILCSPLNGLPKSTGRLACERTAGQRLNIIIVAEGAIDRDGKPITAEKVKEVVVENLKQDTRITV 76 (512)
Q Consensus 1 d~iliPE~p~~---~-~~~~~~~~~~~~~~~i~~~~~~gk~~~iIvVAEG~~d~~g~~i~~~~l~~~i~~~~g~~~R~t~ 76 (512)
|+|||||.|++ . ++|+ .+++++.+||+++|||||||++|++|+++.+++|+++|++++|+++|+++
T Consensus 211 d~iliPE~~~~~~~~~~i~~----------~l~~~~~~gk~~~iIvvaEG~~d~~g~~i~~~~l~~~l~~~~g~~~R~~~ 280 (745)
T TIGR02478 211 DYVFIPERPPEEGWEDQLCH----------KLKRNRKAGKRKNIVIVAEGAIDRDLNPITSEDVKDVLVERLGLDTRITV 280 (745)
T ss_pred CEEEecCCCCCchHHHHHHH----------HHHHHHHcCCCcEEEEEeCCcccccCCcccHHHHHHHHHHhcCCceEEee
Confidence 79999999999 4 8888 89898999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCCeeEEechHHHHhhcccchHhhhHHHHHHHHHhcC
Q psy5984 77 LGHVQRGGSPSAFDRVLGCRMGAEAVMALMEATPGTEPCVMSLDGNQAVRLPLMECVEKTKAVAKAMADKQWDLAVQLRG 156 (512)
Q Consensus 77 LGh~QRgG~Psa~Dr~la~~~G~~AV~~l~~g~~~~~~~mv~i~~~~i~~vpl~e~~~~~k~v~~~~~~~~~~~a~~l~g 156 (512)
|||+||||+||++||++|++||.+||+++++|+++++++||++++++++++||+++++++|.||++|.+++|+.|++|||
T Consensus 281 LGh~QRgg~Psa~Dr~la~~~G~~Av~~~~~g~~~~~~~mv~~~~~~~~~~pl~~~~~~~k~v~~~~~~~~~~~a~~~r~ 360 (745)
T TIGR02478 281 LGHVQRGGAPSAYDRILATRQGVEAVLAVLESTPETPSPVISLRGNKIVRKPLVEAVAQTKTVAKAIKEKRFAEAMRLRG 360 (745)
T ss_pred cChhhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCEEEEEeHHHHHhhcCCCCHHHHhccHHHHHHhcC
Confidence 99999999999999999999999999999999987789999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccchHHhhhhhhccCCCCCCcccccCCCCcceEEEEeeCCCCCCchHHHHHHHHhcCCcc---c-eeccccc
Q psy5984 157 RQVFPHPSFARNLETYKMLTRLKPPKSAFDEMGRGLEGYTLAVMHIGAPACGMNAAVRSFCNDNYNTD---F-IYRLYSE 232 (512)
Q Consensus 157 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iai~~~G~~a~GMNaa~ra~~~~~~~~~---~-i~~~~~~ 232 (512)
. +|.+++++|+.++.+.++....+. ..+++||||+|+||||||||+|+|++++.+.+.+ + +++||.|
T Consensus 361 ~------~f~~~~~~~~~~~~~~~~~~~~~~---~~~~~rIaIltsGG~apGmNaair~vv~~a~~~g~~V~Gi~~G~~G 431 (745)
T TIGR02478 361 R------EFVENLATFLFLSIPDQDKKLVPS---KASRLRIAIIHVGAPAGGMNAATRSAVRYAIARGHTVIAIHNGFSG 431 (745)
T ss_pred H------HHHHHHHHHHhhhccCCccccCCC---CCCceEEEEEecCCCchhHHHHHHHHHHHHHhCCCEEEEEecChhh
Confidence 9 999999999999998665543331 2357999999999999999999999999877665 2 7788876
Q ss_pred cCCccc--ceeeeecccccccCcccccCcchhHHH-------------------HHHHHHHHhHHHHHHhHhhhhcCCcc
Q psy5984 233 EGKGLF--SARQNVLGHMQQGGSPSPFDRNMGTKQ-------------------AANTAYQAGIQLVEARSDYKEFCIPM 291 (512)
Q Consensus 233 ~~~g~~--~~~~~V~G~~~rGGs~~~~~R~~~~~~-------------------~~~~~~~a~~~L~~a~~~y~~~~ipm 291 (512)
+.++.+ .+|.+|.+|.++|||.++|.|.++... |++..|.++..|.+.+..||+++||+
T Consensus 432 L~~~~~~~l~~~~v~~~~~~GGt~LgtsR~~~~~~~~~i~~~l~~~~Id~LivIGGdgs~~~a~~L~~~~~~~~~~~i~v 511 (745)
T TIGR02478 432 LARGDVRELTWSDVEGWVGEGGSELGTNRELPGKDLGMIAYYFQKHKIDGLLIIGGFEAFEALLQLEQAREKYPAFRIPM 511 (745)
T ss_pred hccCCeecCCHHHHHHHHhcCCcccccCCCCchhHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHHhhCCCCCccE
Confidence 554432 368899999999999999999875221 12567888899999999999999999
Q ss_pred cccccccccCCCCceeeccccCccccccccc-----------ceEEEEecCCCcchhhHHHHHHHHHHHHcCC-EEEEEe
Q psy5984 292 VVIPSTISNNVPGTEFSLGCDTALNEITEEG-----------YTLAVMHIGAPACGMNAAVRSFVRNCIYRGD-TVIGIH 359 (512)
Q Consensus 292 v~iPatIsNnvpgte~slG~DTaln~~~~~~-----------~~iaIi~sGg~apG~NAair~~v~~~~~~G~-~v~g~~ 359 (512)
|+||+|||||+||||||+|+|||+|.++++. .+++|+.+-|-.||.-|+..++.. |. -+|-.+
T Consensus 512 vgIPkTIDNDi~gtd~t~GfdTA~~~~~~~id~i~~ta~s~~~rv~iVEvMGR~~G~LAl~~alA~-----gad~iliPE 586 (745)
T TIGR02478 512 VVIPATISNNVPGTEYSLGSDTALNEITEYCDNIKQSASASKRRVFVVETMGGYSGYLATMAGLAT-----GADAAYIPE 586 (745)
T ss_pred EEecccccCCCCCCccCCCHHHHHHHHHHHHHHHHHhhHhcCCcEEEEEecCccccHHHHHHHhhc-----CCCEEEeCC
Confidence 9999999999999999999999999987752 256666666666666655444331 21 122222
Q ss_pred cch--hhhcccceEecChhcccccc-ccCCceeecccCCCCCcHHHHHHHHHHcCCceEEEecCccc---hhhhhhhcCC
Q psy5984 360 DGV--EGLVAGNVQIMQWSDVTGWV-GQGGAMLGTKRTLPEKKLPQIAAKLKELKIQALLIIGGFED---EQGHMQQGGS 433 (512)
Q Consensus 360 ~G~--~GL~~g~~~~l~~~~v~~~~-~~GGsiLgt~R~~p~~~~~~i~~~l~~~~i~~LvviGGf~s---~lGh~QqGG~ 433 (512)
..| ..|.+ ++..+... .... ..++.++-++........+.+++.|++... ++|++ .+||+||||.
T Consensus 587 ~~~~~~~l~~-~v~~i~~~--~~~~~~~~~iiv~~Eg~~~~~~~~~l~~~i~~e~~------~~~~~R~~~LG~~QRgg~ 657 (745)
T TIGR02478 587 EGISLKDLQE-DIEHLKEK--FAHGNRAGKLILRNENASKNYTTDFIARIISEEAK------GRFDARTAVLGHMQQGGS 657 (745)
T ss_pred CCCCHHHHHH-HHHHHHHH--HhcCCCCceEEEEeCCCccCCCHHHHHHHHHHHhc------CCCceEeccCCccccCCC
Confidence 211 11110 00000000 0001 123445544433222356778888874311 35654 6999999999
Q ss_pred CccccCchhHHHHHHHHHHHHHHHhhhcCCCCceeecCCCcEEEEEeecCceeEeeccc-hhhhcCcccCCCcccCCCC
Q psy5984 434 PSPFDRNMGTKQAANTVEWMIDQLKKCTKPDGSVFTDSPETAVLMGVIRRQYCFTPLQT-LKKETNFECKSCNGQTSQV 511 (512)
Q Consensus 434 PstiDr~lG~~tA~~ai~~l~~~l~~~a~s~~rv~~~~~~~a~vigl~g~~~~~~Pl~~-l~~~~d~~~r~~~~~ww~~ 511 (512)
|+++||.+|++++.+|++++.+.++.. . ..+..++.+++++|+.+++++++|+++ +.++|||+|||||+|||+.
T Consensus 658 ps~~Dr~~a~~lG~~Av~~~~~~~~~~---~-~~~~~~~~~~~~vg~~~~~~~~~p~~~~~~~~~d~~~r~p~~~~w~~ 732 (745)
T TIGR02478 658 PSPFDRNRATRLAIRAVDFIEEKIKKS---A-DKLGADDTSAVVIGIRGSNVLFTPVKGLLAKETDFEHRRPKNQWWLD 732 (745)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccc---c-cccccCCCccEEEEEECCEEEEEEHHHHHhhccCcccCCCCCchhhh
Confidence 999999999999999999999875532 1 234456789999999999999999998 5689999999999999973
No 3
>KOG2440|consensus
Probab=100.00 E-value=1.3e-60 Score=514.75 Aligned_cols=403 Identities=38% Similarity=0.482 Sum_probs=339.7
Q ss_pred CEEEeCCCccCc--ccccccccCCchhhHHHHHHHcCCCcEEEEEeCCCccCCCCcccHHHHHHHHHHhcCCceeEEeCC
Q psy5984 1 TWPFQPLWPRKQ--ILCSPLNGLPKSTGRLACERTAGQRLNIIIVAEGAIDRDGKPITAEKVKEVVVENLKQDTRITVLG 78 (512)
Q Consensus 1 d~iliPE~p~~~--~~~~~~~~~~~~~~~i~~~~~~gk~~~iIvVAEG~~d~~g~~i~~~~l~~~i~~~~g~~~R~t~LG 78 (512)
|+||+||.|.+. ++|+ .+.+.+++| ..+|||+||+.+.+|++++++++++.+.+++++++|.|+||
T Consensus 205 D~i~~pe~~~~~~~q~~~----------~l~~~r~~G--ln~viVigG~~~~~ga~i~ae~vk~~~~k~lv~g~p~TilG 272 (666)
T KOG2440|consen 205 DTIFIPERPGEDPEQLCE----------ILDSIRKRG--LNIVIVIGGAIDNTGAPIIAEEVKERKLKVLVVGVPKTILG 272 (666)
T ss_pred CEEEecCCCCCCHHHHHH----------HHHHHHhCC--CCEEEEEecccCCCCCcccHHHHHHhhhheeeecceeeecC
Confidence 899999999986 8999 888998886 89999999999999999999999999999999999999999
Q ss_pred ccccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCCeeEEechHHHHhhcccchHhhhHHHHHHHHHhcCCC
Q psy5984 79 HVQRGGSPSAFDRVLGCRMGAEAVMALMEATPGTEPCVMSLDGNQAVRLPLMECVEKTKAVAKAMADKQWDLAVQLRGRQ 158 (512)
Q Consensus 79 h~QRgG~Psa~Dr~la~~~G~~AV~~l~~g~~~~~~~mv~i~~~~i~~vpl~e~~~~~k~v~~~~~~~~~~~a~~l~g~~ 158 (512)
|+||||.|++|||++|++||.+||.++++..+ . ++++++++++|+++++..++.+..++.+++|.++.++|++
T Consensus 273 dvqrgg~p~afDr~ta~~~g~eAI~a~l~~a~---s---~~~g~~~VRlmgr~~~~it~~~tla~~~~d~~l~~elr~~- 345 (666)
T KOG2440|consen 273 DVQRGGVPSAFDRITACEMGQEAINAALEEAE---S---AENGNGIVRLMGRESVHITLEATLASRDKDFCLAPELRGR- 345 (666)
T ss_pred ccccCCcccccchHHHHHHHHHHHHHHHhhch---h---hcccceeEEehhHHHHHHHHHHHHhcCccceeehhhhcch-
Confidence 99999999999999999999999999999887 3 7889999999999999999999999999999999999999
Q ss_pred CCCCccccchHHhhhhhhccCCCCCCcccccCCCCcceEEEEeeCCCCCCchHHHHHHHHhcCCcc---c-eeccccccC
Q psy5984 159 VFPHPSFARNLETYKMLTRLKPPKSAFDEMGRGLEGYTLAVMHIGAPACGMNAAVRSFCNDNYNTD---F-IYRLYSEEG 234 (512)
Q Consensus 159 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iai~~~G~~a~GMNaa~ra~~~~~~~~~---~-i~~~~~~~~ 234 (512)
+|.+++++|+.++..+|+....|.. ..+++||+|+|+|+.|||+|+|++++.+...+ + ++++|.+..
T Consensus 346 -----~f~~~~~~~~~~~~~~~~~~~~p~~----~~~~~~ii~~g~~~~~lnaa~~~~v~~a~~~G~~~~~i~~~~~gl~ 416 (666)
T KOG2440|consen 346 -----KFTLNLNTYKILDVVDPRAEQDPFY----GEIPGAIGLFGAPAAGLNAAGHSVLRYAEGAGQDVIAISNGFEGLA 416 (666)
T ss_pred -----hhhhhhhHHhhhhccccccccCCCC----ceeccceeeechhhhHHHHHHHHHHHHhhhcCceeEeeccchhhhh
Confidence 9999999999999998877666544 23779999999999999999999999877665 3 677776543
Q ss_pred Cccc--ceeeeecccccccCcccccCcchhHH---H-----------------HHHHHHHHhHHHHHHhHhhhhcCCccc
Q psy5984 235 KGLF--SARQNVLGHMQQGGSPSPFDRNMGTK---Q-----------------AANTAYQAGIQLVEARSDYKEFCIPMV 292 (512)
Q Consensus 235 ~g~~--~~~~~V~G~~~rGGs~~~~~R~~~~~---~-----------------~~~~~~~a~~~L~~a~~~y~~~~ipmv 292 (512)
++.. ..|.+|.+|.++||+.++++|.+|+. + +.|++|.+..+|.+++..|+.|++|||
T Consensus 417 ~d~~~~~~~~dv~~w~~~ggs~~gtk~~~~e~~~~~~I~~~~~~r~i~gl~~~ggf~a~~~~~~l~g~~~~yt~f~i~~v 496 (666)
T KOG2440|consen 417 KDALGELIWKDVGLWLSQGGSALGTKRETPEKMDLKYIAPTLMKRKIDGLAIDGGFEALLAQSALHGARAGYTGFDIPMV 496 (666)
T ss_pred hhhhhhhHHHHhhcccccCchhheecccCcccccHHHhHHHHHHhccccceeecchHHHHHHHHHhhhhcCCCCcccceE
Confidence 3322 36999999999999999999987642 1 248999999999999999999999999
Q ss_pred ccccccccCCCCceeeccccCccccccccc-----------ceEEEEecCCCcchhhHHHHHHHHHHHHcCCEEEEEecc
Q psy5984 293 VIPSTISNNVPGTEFSLGCDTALNEITEEG-----------YTLAVMHIGAPACGMNAAVRSFVRNCIYRGDTVIGIHDG 361 (512)
Q Consensus 293 ~iPatIsNnvpgte~slG~DTaln~~~~~~-----------~~iaIi~sGg~apG~NAair~~v~~~~~~G~~v~g~~~G 361 (512)
.+|+|++||+|||+||+|+||++|.+.+.+ .++.+..+.|+.+|+-|.
T Consensus 497 ~ip~t~snnvpgt~~s~gvdt~~N~~~~~~d~t~Q~a~~T~~~vf~~e~~gg~~gyla~--------------------- 555 (666)
T KOG2440|consen 497 NIPATYSNNVPGTEFSLGVDTALNAWARVCDSTKQSAFGTKRRVFVVETMGGYSGYLAT--------------------- 555 (666)
T ss_pred EeeeeecCCccccccccccchhHhhhhhhhhhccCCcccccceeEEEEecCCCccceec---------------------
Confidence 999999999999999999999999987763 455666655555555443
Q ss_pred hhhhcccceEecCh----------------hccccccccCCceeecccCCCCCcHHHHHHHHHHcCCceEEEecCccc--
Q psy5984 362 VEGLVAGNVQIMQW----------------SDVTGWVGQGGAMLGTKRTLPEKKLPQIAAKLKELKIQALLIIGGFED-- 423 (512)
Q Consensus 362 ~~GL~~g~~~~l~~----------------~~v~~~~~~GGsiLgt~R~~p~~~~~~i~~~l~~~~i~~LvviGGf~s-- 423 (512)
+.||..++...+.+ ..-....+.+|.++++++.........+.+.+.+.++ |-|++
T Consensus 556 ~~~l~~ga~~a~v~e~~~~~~~l~~~~~~~~~k~~~~~~~~l~~r~e~a~~~~~t~~~~~~~~~~~~------~~f~~~~ 629 (666)
T KOG2440|consen 556 MTGLAPGADAAYVPEEGFSIKDLRENAEHLAEKMRYGNPRGLQLRNEGADANYTTLFLENIYSEEGK------GKFQART 629 (666)
T ss_pred cccccccccccccccccccHHHHHHHHHHHHHHhhhcCCCceEEeCCCcchhhhHHHHHHHHhhhcc------cccceee
Confidence 33444443322211 1111234567788888877655567777777776654 55665
Q ss_pred -hhhhhhhcCCCccccCchhHHHHHHHHHHHHHHHh
Q psy5984 424 -EQGHMQQGGSPSPFDRNMGTKQAANTVEWMIDQLK 458 (512)
Q Consensus 424 -~lGh~QqGG~PstiDr~lG~~tA~~ai~~l~~~l~ 458 (512)
.+||+||||.|+||||++|+++|++|+.|+..+++
T Consensus 630 ~~~gh~qqgg~ps~~dr~~~~~m~~~a~~~~~~~~~ 665 (666)
T KOG2440|consen 630 NVLGHIQQGGSPSPFDRNMGTKMAVKAIELITIKLK 665 (666)
T ss_pred ccccceecCCCCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 69999999999999999999999999999987653
No 4
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=100.00 E-value=3.8e-53 Score=470.67 Aligned_cols=298 Identities=33% Similarity=0.523 Sum_probs=256.2
Q ss_pred CcceEEEEeeCCCCCCchHHHHHHHHhcCCcc---c-eeccccccCCc----ccceeeeecccccccCcccccCcchhHH
Q psy5984 193 EGYTLAVMHIGAPACGMNAAVRSFCNDNYNTD---F-IYRLYSEEGKG----LFSARQNVLGHMQQGGSPSPFDRNMGTK 264 (512)
Q Consensus 193 ~~~~iai~~~G~~a~GMNaa~ra~~~~~~~~~---~-i~~~~~~~~~g----~~~~~~~V~G~~~rGGs~~~~~R~~~~~ 264 (512)
+++||||||+||||||||+|+|++|+.+++.+ + +++||.|+.+| ...+|.+|.+|.++|||.++|.|..+..
T Consensus 2 ~~k~IaIltSGGdapGmNaaIravvr~a~~~g~~V~gi~~Gy~GL~~g~~~i~~l~~~~V~~i~~~GGT~LGTsR~~~f~ 81 (762)
T cd00764 2 AGKAIAVLTSGGDAQGMNAAVRAVVRMGIYVGAKVFFVYEGYEGLVKGGDYIKQAEWESVSNWLQEGGTIIGSARCKEFR 81 (762)
T ss_pred CCcEEEEEccCCCchhHhHHHHHHHHHHHHCCCEEEEEecCHHHHhCCCCCceeCCHHHHHHHHhCCCCcccCCCCCccc
Confidence 36899999999999999999999999887766 3 78888876655 2247899999999999999999977622
Q ss_pred --HH----H----------------HHHHHHhHHHH------------------HHhHhhhhcCCcccccccccccCCCC
Q psy5984 265 --QA----A----------------NTAYQAGIQLV------------------EARSDYKEFCIPMVVIPSTISNNVPG 304 (512)
Q Consensus 265 --~~----~----------------~~~~~a~~~L~------------------~a~~~y~~~~ipmv~iPatIsNnvpg 304 (512)
.+ . +..+.++..|. ++++.|+ .+++|+||+|||||+||
T Consensus 82 ~~e~~~~a~~~L~~~~Id~LvvIGGdgSl~gA~~l~~e~~~l~~el~~~g~i~~~~~~~~~--~l~vVGiPkTIDNDl~g 159 (762)
T cd00764 82 EREGRLQAAYNLIQRGITNLCVIGGDGSLTGADLFRSEWPSLLEELVKDGKITEEEVAKYQ--HLNIVGMVGSIDNDFCG 159 (762)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHhhhHHHHHHHhcCcccHHHHhcCC--CceEEEeccceeCCCCC
Confidence 11 1 11222222221 2333443 57899999999999999
Q ss_pred ceeeccccCcccccccc---------------------------------------------------------------
Q psy5984 305 TEFSLGCDTALNEITEE--------------------------------------------------------------- 321 (512)
Q Consensus 305 te~slG~DTaln~~~~~--------------------------------------------------------------- 321 (512)
||+|+|+|||+|.++++
T Consensus 160 TD~TiGfdTAl~~i~eaId~i~~tA~Sh~R~fVVEvMGR~~G~LAl~aglA~gAd~ilIPE~p~~~~~~~~i~~~l~~~~ 239 (762)
T cd00764 160 TDMTIGTDSALHRICEVVDAITTTAQSHQRTFVLEVMGRHCGYLALVSGLATGADWIFIPERPPEDGWEDQMCRRLSEHR 239 (762)
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEECCCCchHHHHHHHhccCCCEEEecCCCCchhHHHHHHHHHHHHH
Confidence 99999999998877665
Q ss_pred --------------------------------------------------------------------------------
Q psy5984 322 -------------------------------------------------------------------------------- 321 (512)
Q Consensus 322 -------------------------------------------------------------------------------- 321 (512)
T Consensus 240 ~~gk~~~iIVVaEGa~d~~g~~i~~~~l~~~l~~~~g~d~R~t~LGh~QRGG~Psa~Dr~la~~~G~~AV~~l~~g~~~~ 319 (762)
T cd00764 240 SRGKRLNIIIVAEGAIDDQLKPITSEDVKDLVVERLGLDTRVTTLGHVQRGGTPSAFDRILASLMGVEAVMALLEATPDT 319 (762)
T ss_pred hcCCCcEEEEEeCCCccccCCCccHHHHHHHHHHhcCCCeeEeecChhhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence
Q ss_pred ---------------------------------------------------------------------cceEEEEecCC
Q psy5984 322 ---------------------------------------------------------------------GYTLAVMHIGA 332 (512)
Q Consensus 322 ---------------------------------------------------------------------~~~iaIi~sGg 332 (512)
.+||+|+++||
T Consensus 320 ~~~~i~~~~~~i~~~pl~e~v~~~k~v~~~~~~~~~~~a~~lr~~~f~~~~~~~~~~~~~~~~~~~~~~~~~IaIltsGG 399 (762)
T cd00764 320 PACVVSLNGNKAVRLPLMECVQLTKDVQKAMDEKRFDEAAALRGKSFDKNWNLYKLLAIELPQPLPEKTNLNIAIVNVGA 399 (762)
T ss_pred CCEEEEEECCEEEEEEHHHHHhhccchhhhhhhhhHHHHHHhcchhHHHHHHHHHhccccCCccCCcccccEEEEEecCC
Confidence 17999999999
Q ss_pred CcchhhHHHHHHHHHHHHcCCEEEEEecchhhhcccceEecChhccccccccCCceeecccCCCCCcHHHHHHHHHHcCC
Q psy5984 333 PACGMNAAVRSFVRNCIYRGDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGAMLGTKRTLPEKKLPQIAAKLKELKI 412 (512)
Q Consensus 333 ~apG~NAair~~v~~~~~~G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGsiLgt~R~~p~~~~~~i~~~l~~~~i 412 (512)
||||||+++|+++++++.+|++|||+++||.||+++++.+|+|.++.+|.++||++|||+|+.|++++++++++|++++|
T Consensus 400 ~apGmNaairavv~~a~~~g~~v~gi~~G~~GL~~~~~~~l~~~~v~~~~~~GGt~LGT~R~~~~~~~~~i~~~l~~~~I 479 (762)
T cd00764 400 PAAGMNAAVRSAVRYGLAHGHRPYAIYDGFEGLAKGQIVELGWIDVGGWTGRGGSELGTKRTLPKKDLETIAYNFQKYGI 479 (762)
T ss_pred CchhHHHHHHHHHHHHHHCCCEEEEEecCHHHhcCCCcccCCHHHHHHHHhCCcccccccCCCcHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999987789999999999999
Q ss_pred ceEEEecCccchhhhhh--h------------cCCCccccCc-------hhHHHHHHHHHHHHHHHhhhcCCC-Cceee-
Q psy5984 413 QALLIIGGFEDEQGHMQ--Q------------GGSPSPFDRN-------MGTKQAANTVEWMIDQLKKCTKPD-GSVFT- 469 (512)
Q Consensus 413 ~~LvviGGf~s~lGh~Q--q------------GG~PstiDr~-------lG~~tA~~ai~~l~~~l~~~a~s~-~rv~~- 469 (512)
|+|++||||||+.+..| + .|+|+||||| +||+||++.+...++++++++.++ +|+|+
T Consensus 480 d~LivIGGdgs~~~a~~L~~~~~~y~~~~i~vVgIPkTIDNDv~gTd~siGfdTAln~~~~~id~i~~tA~s~~~RvfVV 559 (762)
T cd00764 480 DGLIIVGGFEAYKGLLQLREAREQYEEFCIPMVLIPATVSNNVPGTDFSLGSDTALNALMKYCDRIKQSASGTKRRVFIV 559 (762)
T ss_pred CEEEEECChhHHHHHHHHHHHHhhCCCCCccEEEecccccCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHhhcCCeEEEE
Confidence 99999999999977643 1 3899999995 799999999999999999999776 48998
Q ss_pred -----cCCCcEEEEEee-cCceeEeeccc
Q psy5984 470 -----DSPETAVLMGVI-RRQYCFTPLQT 492 (512)
Q Consensus 470 -----~~~~~a~vigl~-g~~~~~~Pl~~ 492 (512)
++||+|.+.|+. |++++|+|...
T Consensus 560 EvMGR~~G~LA~~aglA~GAd~i~iPE~~ 588 (762)
T cd00764 560 ETMGGYCGYLATMTGLAVGADAAYVFEEP 588 (762)
T ss_pred EeCCCCccHHHHHHHhhcCCCEEEeCCCC
Confidence 799999999996 78999999653
No 5
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).
Probab=100.00 E-value=2.9e-50 Score=449.75 Aligned_cols=296 Identities=35% Similarity=0.534 Sum_probs=251.9
Q ss_pred ceEEEEeeCCCCCCchHHHHHHHHhcCCcc---c-eeccccccCCc--c--cceeeeecccccccCcccccCcchhH---
Q psy5984 195 YTLAVMHIGAPACGMNAAVRSFCNDNYNTD---F-IYRLYSEEGKG--L--FSARQNVLGHMQQGGSPSPFDRNMGT--- 263 (512)
Q Consensus 195 ~~iai~~~G~~a~GMNaa~ra~~~~~~~~~---~-i~~~~~~~~~g--~--~~~~~~V~G~~~rGGs~~~~~R~~~~--- 263 (512)
+||||+|+||||||||||+|++|+.+++.+ + +++||.|+..+ . ..+|.+|.+|.++|||.++|.|..+.
T Consensus 1 krIaIltsGGdapGmNaaIravv~~a~~~g~~V~gi~~G~~GL~~~~~~~~~l~~~~v~~i~~~GGt~LGtsR~~~~~~~ 80 (745)
T TIGR02478 1 KRIGVLTSGGDAQGMNAAVRAVVRMAIYVGCRVYAIREGYQGLVDGGDNIEEANWEDVRGILSLGGTIIGTARCKEFRER 80 (745)
T ss_pred CEEEEEecCCCcHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHhcCCCCeEECCHHHHhhHHhCCCceecCCCCCcccCH
Confidence 589999999999999999999999887666 2 78888766544 2 24688999999999999999997652
Q ss_pred ---HHHH----------------HHHHHHhHHHHH------------------HhHhhhhcCCcccccccccccCCCCce
Q psy5984 264 ---KQAA----------------NTAYQAGIQLVE------------------ARSDYKEFCIPMVVIPSTISNNVPGTE 306 (512)
Q Consensus 264 ---~~~~----------------~~~~~a~~~L~~------------------a~~~y~~~~ipmv~iPatIsNnvpgte 306 (512)
.+.. +..+.++..|.+ ++++|+ .+|+|+||+|||||+||||
T Consensus 81 ~~~~~~~~~L~~~~Id~LivIGGdgS~~~a~~l~~e~~~~~~~l~~~~~i~~~~~~~~~--~l~vvGiPkTIDNDl~gTd 158 (745)
T TIGR02478 81 PGRLKAARNLIKRGIDNLVVIGGDGSLTGADLFREEWPSLLEELVDTGKITAEQAEEHR--HLTIVGLVGSIDNDMCGTD 158 (745)
T ss_pred HHHHHHHHHHHHhCCCEEEEECChhHHHHHHHHHHHhHHHHHHHHHccchhHHHHhcCC--CCcEEEEccccccCCCCCc
Confidence 1111 122333333222 223333 5899999999999999999
Q ss_pred eeccccCcccccccc-----------------------------------------------------------------
Q psy5984 307 FSLGCDTALNEITEE----------------------------------------------------------------- 321 (512)
Q Consensus 307 ~slG~DTaln~~~~~----------------------------------------------------------------- 321 (512)
||+|+|||+|.++++
T Consensus 159 ~TiGfdTA~~~i~~aid~i~~ta~Sh~R~fvvEvMGR~~G~LAl~aalA~gad~iliPE~~~~~~~~~~i~~~l~~~~~~ 238 (745)
T TIGR02478 159 MTIGADSALHRICEAIDAISSTAQSHQRAFVVEVMGRHCGYLALMAAIATGADYVFIPERPPEEGWEDQLCHKLKRNRKA 238 (745)
T ss_pred CCCCHHHHHHHHHHHHHHHHhhhhccCCEEEEEEcCccccHHHHHHHhccCCCEEEecCCCCCchHHHHHHHHHHHHHHc
Confidence 999999987765544
Q ss_pred --------------------------------------------------------------------------------
Q psy5984 322 -------------------------------------------------------------------------------- 321 (512)
Q Consensus 322 -------------------------------------------------------------------------------- 321 (512)
T Consensus 239 gk~~~iIvvaEG~~d~~g~~i~~~~l~~~l~~~~g~~~R~~~LGh~QRgg~Psa~Dr~la~~~G~~Av~~~~~g~~~~~~ 318 (745)
T TIGR02478 239 GKRKNIVIVAEGAIDRDLNPITSEDVKDVLVERLGLDTRITVLGHVQRGGAPSAYDRILATRQGVEAVLAVLESTPETPS 318 (745)
T ss_pred CCCcEEEEEeCCcccccCCcccHHHHHHHHHHhcCCceEEeecChhhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence
Q ss_pred ----------------------------------------------------------------------cceEEEEecC
Q psy5984 322 ----------------------------------------------------------------------GYTLAVMHIG 331 (512)
Q Consensus 322 ----------------------------------------------------------------------~~~iaIi~sG 331 (512)
.+||+|+++|
T Consensus 319 ~mv~~~~~~~~~~pl~~~~~~~k~v~~~~~~~~~~~a~~~r~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~rIaIltsG 398 (745)
T TIGR02478 319 PVISLRGNKIVRKPLVEAVAQTKTVAKAIKEKRFAEAMRLRGREFVENLATFLFLSIPDQDKKLVPSKASRLRIAIIHVG 398 (745)
T ss_pred EEEEEECCEEEEEeHHHHHhhcCCCCHHHHhccHHHHHHhcCHHHHHHHHHHHhhhccCCccccCCCCCCceEEEEEecC
Confidence 1679999999
Q ss_pred CCcchhhHHHHHHHHHHHHcCCEEEEEecchhhhcccceEecChhccccccccCCceeecccCCCCCcHHHHHHHHHHcC
Q psy5984 332 APACGMNAAVRSFVRNCIYRGDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGAMLGTKRTLPEKKLPQIAAKLKELK 411 (512)
Q Consensus 332 g~apG~NAair~~v~~~~~~G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGsiLgt~R~~p~~~~~~i~~~l~~~~ 411 (512)
|||||||+++|+++++++.+|++|||+++||.||+++++.+|+|.++.+|.++||++|||+|+.|++++++++++|++++
T Consensus 399 G~apGmNaair~vv~~a~~~g~~V~Gi~~G~~GL~~~~~~~l~~~~v~~~~~~GGt~LgtsR~~~~~~~~~i~~~l~~~~ 478 (745)
T TIGR02478 399 APAGGMNAATRSAVRYAIARGHTVIAIHNGFSGLARGDVRELTWSDVEGWVGEGGSELGTNRELPGKDLGMIAYYFQKHK 478 (745)
T ss_pred CCchhHHHHHHHHHHHHHhCCCEEEEEecChhhhccCCeecCCHHHHHHHHhcCCcccccCCCCchhHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999987667999999999999
Q ss_pred CceEEEecCccchhhhhh--------------hcCCCccccCc-------hhHHHHHHHHHHHHHHHhhhcCCC-Cceee
Q psy5984 412 IQALLIIGGFEDEQGHMQ--------------QGGSPSPFDRN-------MGTKQAANTVEWMIDQLKKCTKPD-GSVFT 469 (512)
Q Consensus 412 i~~LvviGGf~s~lGh~Q--------------qGG~PstiDr~-------lG~~tA~~ai~~l~~~l~~~a~s~-~rv~~ 469 (512)
||+|++||||||+.++.+ -.|+|+||||| +||+||++.+..++++++.++.|+ .|+|+
T Consensus 479 Id~LivIGGdgs~~~a~~L~~~~~~~~~~~i~vvgIPkTIDNDi~gtd~t~GfdTA~~~~~~~id~i~~ta~s~~~rv~i 558 (745)
T TIGR02478 479 IDGLLIIGGFEAFEALLQLEQAREKYPAFRIPMVVIPATISNNVPGTEYSLGSDTALNEITEYCDNIKQSASASKRRVFV 558 (745)
T ss_pred CCEEEEeCChHHHHHHHHHHHHHhhCCCCCccEEEecccccCCCCCCccCCCHHHHHHHHHHHHHHHHHhhHhcCCcEEE
Confidence 999999999999977632 13899999995 799999999999999999998776 68998
Q ss_pred ------cCCCcEEEEEee-cCceeEeeccc
Q psy5984 470 ------DSPETAVLMGVI-RRQYCFTPLQT 492 (512)
Q Consensus 470 ------~~~~~a~vigl~-g~~~~~~Pl~~ 492 (512)
++||+|+..|+. +.+++++|...
T Consensus 559 VEvMGR~~G~LAl~~alA~gad~iliPE~~ 588 (745)
T TIGR02478 559 VETMGGYSGYLATMAGLATGADAAYIPEEG 588 (745)
T ss_pred EEecCccccHHHHHHHhhcCCCEEEeCCCC
Confidence 799999999996 78999999654
No 6
>PTZ00287 6-phosphofructokinase; Provisional
Probab=100.00 E-value=2.6e-38 Score=362.58 Aligned_cols=168 Identities=14% Similarity=0.186 Sum_probs=147.1
Q ss_pred cceEEEEecCCCcchhhHHHHHHHHHHHHc-CCEEEEEecchhhhcccceEecChhccccccccCCcee-ecccCCC---
Q psy5984 322 GYTLAVMHIGAPACGMNAAVRSFVRNCIYR-GDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGAML-GTKRTLP--- 396 (512)
Q Consensus 322 ~~~iaIi~sGg~apG~NAair~~v~~~~~~-G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGsiL-gt~R~~p--- 396 (512)
.+||||++|||+|||||++||++++.+... |+ ++++. ||.||+++++.+|+.+++.++.++||++| ||+|..+
T Consensus 836 ~~rIGVLtSGGdAPG~NnVIrgvv~~a~~~~g~-~~gf~-G~~GLl~~~~i~Lt~~~V~~i~n~GGtiLlgssR~~~f~t 913 (1419)
T PTZ00287 836 EIKIGIVFLSRQAPGAMNVLCGLYRRLKLLKGV-CIAFY-GLYGLLNNKYIIIDDDNIAKHVNQGGLELTGNSPEHSLFD 913 (1419)
T ss_pred CcEEEEECcCCCcHhHHHHHHHHHHHHHHhCCe-EEEEe-CchhhcCCCeEECCHHHHhhHHHcCCeeecCCcCCCCCCC
Confidence 379999999999999999999999998654 66 45554 99999999999999999999999999999 9999754
Q ss_pred CCcHHHHHHHHHHcCCceEEEecCccchhhhh---h----------hcCCCccccCc---------hhHHHHHHHHHHHH
Q psy5984 397 EKKLPQIAAKLKELKIQALLIIGGFEDEQGHM---Q----------QGGSPSPFDRN---------MGTKQAANTVEWMI 454 (512)
Q Consensus 397 ~~~~~~i~~~l~~~~i~~LvviGGf~s~lGh~---Q----------qGG~PstiDr~---------lG~~tA~~ai~~l~ 454 (512)
++..+++.++|++++||+|++|||+||+.++. + -.|+|+||||| +||+||++.+..++
T Consensus 914 ~e~~~ka~~~lk~l~ID~LVvIGGDgS~t~A~~LaE~f~~~gi~i~VIGVPkTIDNDL~~~~tD~TiGFDTAv~~~seaI 993 (1419)
T PTZ00287 914 KENRNKVCETVTNLQLNGLVMPGSNVTITEAALLAEYFLEKKIPTSVVGIPLTGSNNLIHELIETCVGFDSSTKVYASLI 993 (1419)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCchHHHHHHHHHHHHHhcCCCccEEEeCceeeCCCCCCCCcCCCCHHHHHHHHHHHH
Confidence 34699999999999999999999999986652 1 24899999995 69999999999999
Q ss_pred HHHhhhcCCCCc-eee------cCCCcEEEEEee-cCceeEeecc
Q psy5984 455 DQLKKCTKPDGS-VFT------DSPETAVLMGVI-RRQYCFTPLQ 491 (512)
Q Consensus 455 ~~l~~~a~s~~r-v~~------~~~~~a~vigl~-g~~~~~~Pl~ 491 (512)
+++..++.|++| +|+ +++++|..+|++ +.+++++|..
T Consensus 994 ~nL~~dA~S~~ry~~fVEVMGR~aGhLALe~aLatgAniiLIPEe 1038 (1419)
T PTZ00287 994 GNVLTDAVSMPKYWHFIRLMGRSPSHEVLECALQTHPNMVIISEE 1038 (1419)
T ss_pred HHHHHHHHhcCCcEEEEEECCCchHHHHHHHHHhcCCCEEEecCc
Confidence 999999988876 554 688899888996 7899999965
No 7
>PTZ00468 phosphofructokinase family protein; Provisional
Probab=100.00 E-value=7.5e-35 Score=332.17 Aligned_cols=417 Identities=12% Similarity=0.168 Sum_probs=270.2
Q ss_pred CEEEeCCCccCc---------ccccccccCCchhhHHHHHHHcCCCcEEEEEeCCCc-----------------------
Q psy5984 1 TWPFQPLWPRKQ---------ILCSPLNGLPKSTGRLACERTAGQRLNIIIVAEGAI----------------------- 48 (512)
Q Consensus 1 d~iliPE~p~~~---------~~~~~~~~~~~~~~~i~~~~~~gk~~~iIvVAEG~~----------------------- 48 (512)
|+|||||.+++. .+|+ .|.+++++||+++|||||||++
T Consensus 299 niiLIPEe~~~k~~tL~dIvd~Iv~----------~I~kR~~~Gk~ygIIvVsEGliefIpe~~~Li~eln~~l~~~~~g 368 (1328)
T PTZ00468 299 NMILIGEEIKEENRSLMSIVDEIVE----------MILKRDSLGKKHGIVLLPEGLIEFIPEFETLIKELNLILLKTNDR 368 (1328)
T ss_pred CEEEecCcCccchhhhhHHHHHHHH----------HHHHHHHcCCCcEEEEEcCCccccccHHHHHHHHHHHhhccccch
Confidence 789999999984 3344 7888889999999999999997
Q ss_pred ------------------------------cCCCCccc-----HHHHHHHHHHhc--------CCceeEEeCCccccCCC
Q psy5984 49 ------------------------------DRDGKPIT-----AEKVKEVVVENL--------KQDTRITVLGHVQRGGS 85 (512)
Q Consensus 49 ------------------------------d~~g~~i~-----~~~l~~~i~~~~--------g~~~R~t~LGh~QRgG~ 85 (512)
|++|+.-. .+.|++.+++++ .+.++.-.+||.|||+.
T Consensus 369 ~~i~~~Ls~~~~~lf~~lP~~i~~qLl~~rD~hGnvqls~I~tEklLa~lV~~~L~~~~~~~~~f~~k~HflGYE~RCa~ 448 (1328)
T PTZ00468 369 KQIIDSLSQEMKTLFLELPSDVQNQLLLERDPHGNVQVAKIATEELLVHMAKEKLEEVKKDYILDNVKTHYFGYEGRCAL 448 (1328)
T ss_pred hhhhhhcCHHHHHHHHhCcHHHHHHhccccCCCCCEeeccccHHHHHHHHHHHHHHHhhcccccCCceEeecCchhhccC
Confidence 22344211 245555555554 12466669999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCC-------eeEEechHHHHhhcccch----------HhhhHHHH
Q psy5984 86 PSAFDRVLGCRMGAEAVMALMEATPGTEPCVMSLDGN-------QAVRLPLMECVEKTKAVA----------KAMADKQW 148 (512)
Q Consensus 86 Psa~Dr~la~~~G~~AV~~l~~g~~~~~~~mv~i~~~-------~i~~vpl~e~~~~~k~v~----------~~~~~~~~ 148 (512)
||.||..+|+.+|..|++++++|.+ |+|+++++. ++.-+||.++++.++.-. -+++.+.|
T Consensus 449 PS~FD~~yayaLG~~Av~l~~~G~T---GyMatI~nl~~~~~~W~~~~vPL~~mmn~E~r~g~~~pvI~k~~V~l~g~~f 525 (1328)
T PTZ00468 449 PSNFDASYCFALGHTAAALIDNQRS---GYMAVVRKLSLTPEQWEPAGCPLTYMMNIELRKGKSVPVIKKYLVDLKGQSY 525 (1328)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCC---CeEEEEEeCCCCceEEEEccccHHHHhhHHhhCCCccceeeecccCCCcHHH
Confidence 9999999999999999999999998 699999984 456789999987543311 12466777
Q ss_pred HHHHHhcCCCC------CCCc-cccchHHhh--hhhhccCCCCCCcccccCCCCcceEEEEeeCCCCCCchHHHHH-HHH
Q psy5984 149 DLAVQLRGRQV------FPHP-SFARNLETY--KMLTRLKPPKSAFDEMGRGLEGYTLAVMHIGAPACGMNAAVRS-FCN 218 (512)
Q Consensus 149 ~~a~~l~g~~~------~~~~-~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~iai~~~G~~a~GMNaa~ra-~~~ 218 (512)
....+.|..|. ||-| .|.-..... .+.+ +|.. --|-++-+-.= |. ++. .|.
T Consensus 526 ~~~~~~r~~w~~~d~Y~~pGPiQ~~gp~~~~~~~~~~---~~~~--------------~~l~~~~~~~~-~~-~~~~~~~ 586 (1328)
T PTZ00468 526 LAYCQVRSEWKLNDYYRNPGPIQFDGPNSGITNYMIS---PPRV--------------EDLLRMEDRDE-NK-MTHKLCG 586 (1328)
T ss_pred HHHHHHHHHhhhcCcccCCCCeeeccCcccCcceecc---CchH--------------HHHhcCCCCcc-hh-hhccccc
Confidence 77777777654 4433 111000000 0000 0000 00000000000 00 000 111
Q ss_pred hcCCccceeccccccCCcccceeeeecccccccCcccccCcchhHHHH-------------------HHHHHHHhHHHHH
Q psy5984 219 DNYNTDFIYRLYSEEGKGLFSARQNVLGHMQQGGSPSPFDRNMGTKQA-------------------ANTAYQAGIQLVE 279 (512)
Q Consensus 219 ~~~~~~~i~~~~~~~~~g~~~~~~~V~G~~~rGGs~~~~~R~~~~~~~-------------------~~~~~~a~~~L~~ 279 (512)
+.+.. +++.++=.+|...- ........++.+-
T Consensus 587 s~l~~-----------------------------~r~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 637 (1328)
T PTZ00468 587 SELSQ-----------------------------NRCKDDLKIPKILLSTASKFNDDLIISSSCRDLDAYIITKCLPHQT 637 (1328)
T ss_pred chhhh-----------------------------hhhcCCCCCchhhhhhhcccchhhcccCchHHHHHHHHHhhCcHhh
Confidence 11100 11111111111110 0000111111111
Q ss_pred HhHh-----hh--hcCCcccccccccccCCCCceeeccccCcccccccccceEEEEecCCCcchhhHHHHHHHHHHHHcC
Q psy5984 280 ARSD-----YK--EFCIPMVVIPSTISNNVPGTEFSLGCDTALNEITEEGYTLAVMHIGAPACGMNAAVRSFVRNCIYRG 352 (512)
Q Consensus 280 a~~~-----y~--~~~ipmv~iPatIsNnvpgte~slG~DTaln~~~~~~~~iaIi~sGg~apG~NAair~~v~~~~~~G 352 (512)
.|.. |. .|.-|+..|+. -..+. +.....+ .++++||+..||++||+|++|.++...+...|
T Consensus 638 ~~~~~~~~~~~~~~~~~~~~~i~~-----~~~~~------~~~~~~~-~~~~vgIv~~g~~aPG~NnVI~g~~~~~~~~g 705 (1328)
T PTZ00468 638 GRHNSKTLQLREEEYSSPFTEIRE-----SSSSK------SSVGNSL-ACESLGLILSCLSTPGTQNVICGLVNGLPSLK 705 (1328)
T ss_pred hcccCcceEEEeccccCchhhccc-----cccCc------ccccccc-cceeEEEEecCCCCccHHHHHHHHHHHHHhCC
Confidence 1100 00 12223333322 11221 2222112 23899999999999999999999999999877
Q ss_pred CEEEEEecchhhhcccceEec--C----hhccccccccCCceeecc----------cCCCCC------------------
Q psy5984 353 DTVIGIHDGVEGLVAGNVQIM--Q----WSDVTGWVGQGGAMLGTK----------RTLPEK------------------ 398 (512)
Q Consensus 353 ~~v~g~~~G~~GL~~g~~~~l--~----~~~v~~~~~~GGsiLgt~----------R~~p~~------------------ 398 (512)
|+|+++||.||++++...+ + .++++.+.++||++|+++ |+.|..
T Consensus 706 --vig~~~G~~~L~~~~~~~v~l~~~~~~~~~~~~~n~GG~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~~~~ 783 (1328)
T PTZ00468 706 --QLIVFKSLSDFYEGKALKVDLTSEGSLEFFENSLNSGGCIFPNGVEIKMNVSEKKYSNTTLKANDNQEFTNSSCVLSC 783 (1328)
T ss_pred --cEEEEechhHHhcCCceEEecccchhHHHHHHHHhcCCeeeeccccccccccccccCccccccccchhcccccccccc
Confidence 9999999999999986654 3 468899999999999998 765521
Q ss_pred ----cHHHHHHHHHHcCCceEEEecCccchhhhhh------------------hcCCCccccCc---------hhHHHHH
Q psy5984 399 ----KLPQIAAKLKELKIQALLIIGGFEDEQGHMQ------------------QGGSPSPFDRN---------MGTKQAA 447 (512)
Q Consensus 399 ----~~~~i~~~l~~~~i~~LvviGGf~s~lGh~Q------------------qGG~PstiDr~---------lG~~tA~ 447 (512)
..+.+.+.|++++||+|++|||++|+.++.+ -.|+|+||||| +||+||+
T Consensus 784 ~~~~~~~~v~~~L~~~~Id~LVvIGGDgS~t~A~~Lae~~~~~~~~~~~~gi~VIgVPkTIDNDl~~~~te~TiGFDTA~ 863 (1328)
T PTZ00468 784 KGLVSNDFLSQLLSFFNMRAIAIVGNSEAATFGASLSEQLICMSLNGMKSEIPVVFVPVCLENSISHQMIETCIGFDSVT 863 (1328)
T ss_pred ccchhHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHhhhccccccCCCcEEEeCccccCCCCCCCccccccHHhHH
Confidence 3477999999999999999999999766421 13899999995 7999999
Q ss_pred HHHHHHH-HHHhhhcCCCCceee------cCCCcEEEEEee-cCceeEeeccc
Q psy5984 448 NTVEWMI-DQLKKCTKPDGSVFT------DSPETAVLMGVI-RRQYCFTPLQT 492 (512)
Q Consensus 448 ~ai~~l~-~~l~~~a~s~~rv~~------~~~~~a~vigl~-g~~~~~~Pl~~ 492 (512)
+.+..++ +.++.++.+|.|+|+ +++++|..+|++ +.+++++|..-
T Consensus 864 ~~~se~Ign~l~Dtass~kr~~fVevMGR~ag~LAL~~gLatganivlIpEe~ 916 (1328)
T PTZ00468 864 KSISTLVGNLLTDSASATKYWYFMKMIGDKTSNVALEVGIQTHPNLVVIPERY 916 (1328)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEECCcChHHHHHHHHHhhCCCEEEecCcc
Confidence 9999999 767777788888876 678888888996 68999999763
No 8
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=100.00 E-value=1.9e-33 Score=285.83 Aligned_cols=254 Identities=26% Similarity=0.401 Sum_probs=168.0
Q ss_pred eEEEEeeCCCCCCchHHHHHHHHhcCCccc----eeccccccCCccc--ceeeeecccccccCcccccCcchhHH--HHH
Q psy5984 196 TLAVMHIGAPACGMNAAVRSFCNDNYNTDF----IYRLYSEEGKGLF--SARQNVLGHMQQGGSPSPFDRNMGTK--QAA 267 (512)
Q Consensus 196 ~iai~~~G~~a~GMNaa~ra~~~~~~~~~~----i~~~~~~~~~g~~--~~~~~V~G~~~rGGs~~~~~R~~~~~--~~~ 267 (512)
||||+++||||||||+|+|++++...+.++ +++||.++.++.+ .+|.+|.+|.++|||.++|.|..+.. ...
T Consensus 1 rIaIltsGG~apG~Na~i~~vv~~a~~~g~~v~G~~~G~~GL~~~~~~~l~~~~v~~~~~~gGt~LgtsR~~~~~~~~~~ 80 (301)
T TIGR02482 1 KIGILTSGGDAPGMNAAIRAVVRTAIYHGFEVYGIRRGYKGLINGEIKPLESKNVSGIIHRGGTILGTARCPEFKTEEGR 80 (301)
T ss_pred CEEEEccCCCcHHHHHHHHHHHHHHHHCCCEEEEEecCHHHhcCCCeEeCCHHHHhhHHhCCCceeccCCCCccCCHHHH
Confidence 799999999999999999999988665552 6778765543322 36789999999999999999976532 111
Q ss_pred HHHHHHh--------------HHHHHHhHhhhhcCCcccccccccccCCCCceeeccccCccccccccc----------c
Q psy5984 268 NTAYQAG--------------IQLVEARSDYKEFCIPMVVIPSTISNNVPGTEFSLGCDTALNEITEEG----------Y 323 (512)
Q Consensus 268 ~~~~~a~--------------~~L~~a~~~y~~~~ipmv~iPatIsNnvpgte~slG~DTaln~~~~~~----------~ 323 (512)
..+++.+ --+..+...+++++||+|+||+|||||+|+||+|+|+|||+|.++++. .
T Consensus 81 ~~~~~~l~~~~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPkTIDNDl~~td~s~GfdTA~~~~~~~i~~i~~ta~s~~ 160 (301)
T TIGR02482 81 QKAVENLKKLGIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPGTIDNDIPGTDYTIGFDTALNTIIDAVDKIRDTATSHE 160 (301)
T ss_pred HHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHhhCCCEEeecccccCCCcCcccCcChhHHHHHHHHHHHHHHHHhhcCC
Confidence 1111111 113344444455799999999999999999999999999999987762 3
Q ss_pred eEEEEecCCCcchhhHHHHHHHHHHHHcCCEEEEEecchhhhcccceEec------Chhcc----ccccc--cC-Cceee
Q psy5984 324 TLAVMHIGAPACGMNAAVRSFVRNCIYRGDTVIGIHDGVEGLVAGNVQIM------QWSDV----TGWVG--QG-GAMLG 390 (512)
Q Consensus 324 ~iaIi~sGg~apG~NAair~~v~~~~~~G~~v~g~~~G~~GL~~g~~~~l------~~~~v----~~~~~--~G-GsiLg 390 (512)
|+.|++.-|-.+|.-|+..+ |+.+....| +.+++ ..... .+ +.++-
T Consensus 161 rv~ivEvMGR~~G~lAl~~~---------------------la~gad~iliPE~~~~~~~l~~~i~~r~~~g~~~~iIvv 219 (301)
T TIGR02482 161 RAFVIEVMGRHAGDLALYSG---------------------IATGAEIIIIPEFDYDIDELIQRLKEQHEAGKKHSIIIV 219 (301)
T ss_pred CEEEEEeCCCCHHHHHHHHH---------------------HHcCCCEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEE
Confidence 55555555555555554333 333322111 11111 00000 11 12222
Q ss_pred cccCCCCCcHHHHHHHHHHc-CCceEEEecCccchhhhhhhcCCCccccCchhHHHHHHHHHHHHHHHhhhcCCCCceee
Q psy5984 391 TKRTLPEKKLPQIAAKLKEL-KIQALLIIGGFEDEQGHMQQGGSPSPFDRNMGTKQAANTVEWMIDQLKKCTKPDGSVFT 469 (512)
Q Consensus 391 t~R~~p~~~~~~i~~~l~~~-~i~~LvviGGf~s~lGh~QqGG~PstiDr~lG~~tA~~ai~~l~~~l~~~a~s~~rv~~ 469 (512)
++-... .....+++.|++. +++.-+ +.+||+||||.|+++||.+|++++.+|++.+.+
T Consensus 220 aEG~~~-~~~~~l~~~l~~~~g~~~r~------~~lG~~qRgg~ps~~Dr~~a~~lG~~Av~~~~~-------------- 278 (301)
T TIGR02482 220 AEGNIV-GSAKEVAKKIEEATGIETRV------TVLGHTQRGGSPTAFDRVLASRLGAKAVELLLE-------------- 278 (301)
T ss_pred eCCCcC-CcHHHHHHHHHHhcCCeeEE------eecChhhcCCCCCHHHHHHHHHHHHHHHHHHHc--------------
Confidence 222000 1123445555443 222111 349999999999999999999999999998876
Q ss_pred cCCCcEEEEEeecCceeEeeccch
Q psy5984 470 DSPETAVLMGVIRRQYCFTPLQTL 493 (512)
Q Consensus 470 ~~~~~a~vigl~g~~~~~~Pl~~l 493 (512)
+.+.+++++++.++.++|++|+
T Consensus 279 --g~~~~mv~~~~~~~~~~p~~~~ 300 (301)
T TIGR02482 279 --GKGGVMIGIQNNKIVTHPIEEA 300 (301)
T ss_pred --CCCCEEEEEECCEEEEeeHHHh
Confidence 3567899999999999999875
No 9
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=100.00 E-value=4.1e-33 Score=285.49 Aligned_cols=257 Identities=25% Similarity=0.361 Sum_probs=170.7
Q ss_pred ceEEEEeeCCCCCCchHHHHHHHHhcCCcc----ceeccccccCCcc--cceeeeecccccccCcccccCcchhHH--HH
Q psy5984 195 YTLAVMHIGAPACGMNAAVRSFCNDNYNTD----FIYRLYSEEGKGL--FSARQNVLGHMQQGGSPSPFDRNMGTK--QA 266 (512)
Q Consensus 195 ~~iai~~~G~~a~GMNaa~ra~~~~~~~~~----~i~~~~~~~~~g~--~~~~~~V~G~~~rGGs~~~~~R~~~~~--~~ 266 (512)
+||||+|+||||||||+++|++++...+.+ .+++||.++.++. ..+|.+|.+|.++|||.+++.|..+.. ..
T Consensus 1 ~~IaIltsGG~apGmNa~i~~vv~~a~~~g~~v~G~~~G~~GL~~~~~~~l~~~~v~~~~~~gGt~LgtsR~~~~~~~~~ 80 (317)
T cd00763 1 KRIGVLTSGGDAPGMNAAIRGVVRSAIAEGLEVYGIRDGYAGLIAGDIVPLDRYSVSDIINRGGTFLGSARFPEFKDEEG 80 (317)
T ss_pred CEEEEEccCCCcHHHHHHHHHHHHHHHHCCCEEEEEecCHHHhcCCCeEeCCHHHhhhHHhCCCeeeccCCCCccCCHHH
Confidence 589999999999999999999999876655 2777886554332 236789999999999999999975422 22
Q ss_pred HHHHHHHhH--------------HHHHHhHhhhhcCCcccccccccccCCCCceeeccccCccccccccc----------
Q psy5984 267 ANTAYQAGI--------------QLVEARSDYKEFCIPMVVIPSTISNNVPGTEFSLGCDTALNEITEEG---------- 322 (512)
Q Consensus 267 ~~~~~~a~~--------------~L~~a~~~y~~~~ipmv~iPatIsNnvpgte~slG~DTaln~~~~~~---------- 322 (512)
...+++.+. -+..|.. ..++.+|+|+||+|||||+||||||+|+|||+|.++++.
T Consensus 81 ~~~~~~~l~~~~Id~Li~IGGdgs~~~a~~-L~e~~i~vigiPkTIDNDi~gtd~t~Gf~TA~~~~~~~i~~i~~ta~s~ 159 (317)
T cd00763 81 QAKAIEQLKKHGIDALVVIGGDGSYMGAMR-LTEHGFPCVGLPGTIDNDIPGTDYTIGFDTALNTVVEAIDRIRDTSSSH 159 (317)
T ss_pred HHHHHHHHHHcCCCEEEEECCchHHHHHHH-HHHcCCCEEEecccccCCCCCCccCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 222222111 1222222 222479999999999999999999999999999977652
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHcCCE-EEEEecchhhhcccceEecChhcc----ccccc--cC-CceeecccC
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYRGDT-VIGIHDGVEGLVAGNVQIMQWSDV----TGWVG--QG-GAMLGTKRT 394 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~G~~-v~g~~~G~~GL~~g~~~~l~~~~v----~~~~~--~G-GsiLgt~R~ 394 (512)
.|+.|++.-|-.+|.-|+..++.. |.. ++-.+.. ++.+++ ..... .+ +.++-++..
T Consensus 160 ~rv~ivEvMGR~~G~LA~~~ala~-----ga~~iliPE~~-----------~~~~~~~~~i~~~~~~g~~~~vivvaEG~ 223 (317)
T cd00763 160 QRISVVEVMGRHCGDIALAAGIAG-----GAEFIVIPEAE-----------FDREEVANRIKAGIERGKKHAIVVVAEGV 223 (317)
T ss_pred CCEEEEEeCCCChHHHHHHHHHHc-----CCCEEEeCCCC-----------CCHHHHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 356666666666666554433331 111 1111111 111111 11000 11 122322222
Q ss_pred CCCCcHHHHHHHHHHcCCceEEEecCcc---chhhhhhhcCCCccccCchhHHHHHHHHHHHHHHHhhhcCCCCceeecC
Q psy5984 395 LPEKKLPQIAAKLKELKIQALLIIGGFE---DEQGHMQQGGSPSPFDRNMGTKQAANTVEWMIDQLKKCTKPDGSVFTDS 471 (512)
Q Consensus 395 ~p~~~~~~i~~~l~~~~i~~LvviGGf~---s~lGh~QqGG~PstiDr~lG~~tA~~ai~~l~~~l~~~a~s~~rv~~~~ 471 (512)
. +.+.+++.|++.- |++ +.+||+||||.|+++||.+|++++.+|++.+.+
T Consensus 224 ~---~~~~l~~~l~~~~--------g~~~r~~~lG~~qRgg~p~~~Dr~~a~~lg~~Av~~~~~---------------- 276 (317)
T cd00763 224 Y---DVDELAKEIEEAT--------GFETRATVLGHIQRGGSPTAFDRILASRMGAYAVELLLA---------------- 276 (317)
T ss_pred C---CHHHHHHHHHHHh--------CCCcceeccchhhcCCCCChhhHHHHHHHHHHHHHHHHc----------------
Confidence 1 2344555555431 233 359999999999999999999999999999876
Q ss_pred CCcEEEEEeecCceeEeeccchhh
Q psy5984 472 PETAVLMGVIRRQYCFTPLQTLKK 495 (512)
Q Consensus 472 ~~~a~vigl~g~~~~~~Pl~~l~~ 495 (512)
+.+.+++++.+.++.++|++++.+
T Consensus 277 g~~~~mv~~~~~~~~~~pl~~~~~ 300 (317)
T cd00763 277 GKGGLAVGIQNEQLVHHDIIDAIE 300 (317)
T ss_pred CCCCeEEEEECCEEEEecHHHHhh
Confidence 356899999999999999988865
No 10
>PTZ00286 6-phospho-1-fructokinase; Provisional
Probab=99.97 E-value=1.7e-32 Score=292.00 Aligned_cols=282 Identities=17% Similarity=0.194 Sum_probs=188.0
Q ss_pred CcceEEEEeeCCCCCCchHHHHHHHHhcCCc-----cc-eeccccccCCc--ccceeeeecccccccCcccccCcchhHH
Q psy5984 193 EGYTLAVMHIGAPACGMNAAVRSFCNDNYNT-----DF-IYRLYSEEGKG--LFSARQNVLGHMQQGGSPSPFDRNMGTK 264 (512)
Q Consensus 193 ~~~~iai~~~G~~a~GMNaa~ra~~~~~~~~-----~~-i~~~~~~~~~g--~~~~~~~V~G~~~rGGs~~~~~R~~~~~ 264 (512)
+.+||||||+||||||||+++|++|+...+. -+ +++||.|+.++ +..+|..|.+|.++|||.++|.|.....
T Consensus 86 ~~~~iaIvT~GG~~PGlN~vIr~iv~~~~~~~~v~~V~Gi~~Gy~GL~~~~~i~Lt~~~V~~i~~~GGTiLGTSR~~~~~ 165 (459)
T PTZ00286 86 KEVKAGIVTCGGLCPGLNVVIRELVMNLINNYGVKTIYGAKYGYKGLYKEDWIKLDPKDVKTIHRLGGTILGSSRGGFDP 165 (459)
T ss_pred cccEEEEECCCCCChHHHHHHHHHHHHHHHhcCCcEEEEEecCHHHhcCCCeEECCHHHhhhHHhCCCceeccCCChhhH
Confidence 4689999999999999999999999887633 12 77788765433 2247889999999999999999965322
Q ss_pred HH-----------------HHHHHHHhHHHHHHhHhhhhcCCcccccccccccCCCCceeeccccCccccccccc-----
Q psy5984 265 QA-----------------ANTAYQAGIQLVEARSDYKEFCIPMVVIPSTISNNVPGTEFSLGCDTALNEITEEG----- 322 (512)
Q Consensus 265 ~~-----------------~~~~~~a~~~L~~a~~~y~~~~ipmv~iPatIsNnvpgte~slG~DTaln~~~~~~----- 322 (512)
.. ++..+.++..|.+...++ .++||+|+||+|||||+|+||+|+|+|||+|.++++.
T Consensus 166 ~~iv~~L~~~~I~~L~vIGGdgT~~~A~~L~ee~~~~-g~~I~VIGIPKTIDNDI~~td~S~GFdTAv~~~~~aI~~~~~ 244 (459)
T PTZ00286 166 KVMVDTLIRHGINILFTLGGDGTHRGALAIYKELRRR-KLNISVVGIPKTIDNDIPIIDESFGFQTAVEEAQNAIRAAYV 244 (459)
T ss_pred HHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHHh-CCCceEEEeccccCCCCCCcccCcCchHHHHHHHHHHHHHHH
Confidence 21 133455666676665545 4789999999999999999999999999999877662
Q ss_pred ------ceEEEEecCCCcchhhHHHHHHHHHHHHcCC-EEEEEecch--hhhcccceEecChhcccc-ccccCC-ceeec
Q psy5984 323 ------YTLAVMHIGAPACGMNAAVRSFVRNCIYRGD-TVIGIHDGV--EGLVAGNVQIMQWSDVTG-WVGQGG-AMLGT 391 (512)
Q Consensus 323 ------~~iaIi~sGg~apG~NAair~~v~~~~~~G~-~v~g~~~G~--~GL~~g~~~~l~~~~v~~-~~~~GG-siLgt 391 (512)
.+++|++.-|--+|.-|+..+++.. +. -+|--+.-| .+|++- +.. +...+- .++-+
T Consensus 245 eA~S~~~~v~iVEvMGR~sG~LAl~aaLA~~----~ad~vlIPE~~f~l~~ll~~---------l~~r~~~~~~~VIVVa 311 (459)
T PTZ00286 245 EAKSAKNGVGIVKLMGRDSGFIALHASVASA----DVNVCLIPEFDIPLEGVLEY---------IEQRLQKKGHCVIVVA 311 (459)
T ss_pred HHHHhcCcEEEEEecCcchhHHHHHHhhhhc----CCCEEEeCCCCCCHHHHHHH---------HHHHHhcCCcEEEEEe
Confidence 2466666666666666654443310 11 122222111 122110 000 000110 11111
Q ss_pred ccC--------------CC--C--Cc-----HHHHHHHHHHcCCceEEEecCccchhhhhhhcCCCccccCchhHHHHHH
Q psy5984 392 KRT--------------LP--E--KK-----LPQIAAKLKELKIQALLIIGGFEDEQGHMQQGGSPSPFDRNMGTKQAAN 448 (512)
Q Consensus 392 ~R~--------------~p--~--~~-----~~~i~~~l~~~~i~~LvviGGf~s~lGh~QqGG~PstiDr~lG~~tA~~ 448 (512)
+-. .. . .+ -+.|.+.|++.+... -+ --..+||+|+||.|+++||.+++++|.+
T Consensus 312 EGa~~~~~~~~~~~~~D~~Gn~~l~dig~~L~~~I~~~~~~~~~~~--~~--r~~~~gy~qRg~~psa~Dr~~a~~lG~~ 387 (459)
T PTZ00286 312 EGAGQSLKDADLDLGTDASGNKKLWDIGVYLKDEITKYLKKKKPEH--TV--KYIDPSYMIRAVPANAADAKFCTQLAQN 387 (459)
T ss_pred cCCccccccccccccccccCCcccccHHHHHHHHHHHHHhhccCce--EE--EEecCCccccCCCCCHHHHHHHHHHHHH
Confidence 110 00 0 01 133334444333210 00 0124999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCceeecCCCcEEEEEeecCceeEeeccchhhhcCcccCC-CcccCCC
Q psy5984 449 TVEWMIDQLKKCTKPDGSVFTDSPETAVLMGVIRRQYCFTPLQTLKKETNFECKS-CNGQTSQ 510 (512)
Q Consensus 449 ai~~l~~~l~~~a~s~~rv~~~~~~~a~vigl~g~~~~~~Pl~~l~~~~d~~~r~-~~~~ww~ 510 (512)
|+..+.. +.+.+++|+.+.+++++|++++ .+++++|. |+.+||+
T Consensus 388 AV~~~~~----------------G~tg~~Vg~~~~~~~~vPl~~v--~~~~~~~v~~~~~~w~ 432 (459)
T PTZ00286 388 AVHGAMA----------------GFTGFIIGHVHNNYVMIPIKEM--SGNYRRRVNPEGRLWQ 432 (459)
T ss_pred HHHHHHC----------------CCCCEEEEEECCEEEEEeHHHH--hCCCccccCcchHHHH
Confidence 9998864 3678999999999999999988 77899986 9999996
No 11
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3e-32 Score=280.06 Aligned_cols=171 Identities=30% Similarity=0.488 Sum_probs=158.4
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHcCCEEEEEecchhhhcccceEecChhccccccccCCceeecccCCC---CCc
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYRGDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGAMLGTKRTLP---EKK 399 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGsiLgt~R~~p---~~~ 399 (512)
+||+|++||||||||||++|+++|.++..|++|||+++||.||+.|+++.++++++..+.++||++|||+|..+ ++.
T Consensus 3 kkIaIlTSGGdaPGmNa~Iravvr~a~~~g~eV~Gi~~Gy~GL~~~~i~~l~~~~v~~~~~~GGT~lgssR~~~~~~~e~ 82 (347)
T COG0205 3 KKIAILTSGGDAPGMNAVIRAVVRTAIKEGLEVFGIYNGYLGLLEGDIKPLTREDVDDLINRGGTFLGSARFPEFKTEEG 82 (347)
T ss_pred ceEEEEccCCCCccHHHHHHHHHHHHHHcCCEEEEEecchhhhcCCcceeccccchhHHHhcCCeEEeeCCCCCcccHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999875 345
Q ss_pred HHHHHHHHHHcCCceEEEecCccchhhhh---hhc-----CCCccccCc-------hhHHHHHHHHHHHHHHHhhhcCCC
Q psy5984 400 LPQIAAKLKELKIQALLIIGGFEDEQGHM---QQG-----GSPSPFDRN-------MGTKQAANTVEWMIDQLKKCTKPD 464 (512)
Q Consensus 400 ~~~i~~~l~~~~i~~LvviGGf~s~lGh~---QqG-----G~PstiDr~-------lG~~tA~~ai~~l~~~l~~~a~s~ 464 (512)
.++++++|++++||+|++||||||+.|+. +.+ |+|+||||| +||+||++.+..++++++.++.||
T Consensus 83 ~~~~~~~l~~~gId~LvvIGGDgS~~gA~~Lae~~~i~vVGvPkTIDNDi~~td~tiGfdTA~~~~~eaid~l~dtassh 162 (347)
T COG0205 83 RKVAAENLKKLGIDALVVIGGDGSYTGAALLAEEGGIPVVGVPKTIDNDISGTDFTIGFDTALETAVEAIDNLRDTASSH 162 (347)
T ss_pred HHHHHHHHHHcCCCEEEEECCCChHHHHHHHHHhcCCcEEecCCCccCCCcccccCccHHHHHHHHHHHHHHHHHHHhCc
Confidence 88999999999999999999999998873 333 899999996 799999999999999999999999
Q ss_pred Cceee------cCCCcEEEEEee-cCceeEeeccch
Q psy5984 465 GSVFT------DSPETAVLMGVI-RRQYCFTPLQTL 493 (512)
Q Consensus 465 ~rv~~------~~~~~a~vigl~-g~~~~~~Pl~~l 493 (512)
.|+|+ +++|+|...|++ +.+++++|....
T Consensus 163 ~r~~iveVMGR~aG~lAl~aglA~~a~~ilipE~~~ 198 (347)
T COG0205 163 ERIFIVEVMGRHAGWLALAAGLATGADIILIPEEPA 198 (347)
T ss_pred CCEEEEEecCcChhHHHHHHHHhcCCCEEEecCccc
Confidence 99998 799999999997 689999996543
No 12
>PRK03202 6-phosphofructokinase; Provisional
Probab=99.97 E-value=4.6e-32 Score=278.09 Aligned_cols=252 Identities=23% Similarity=0.375 Sum_probs=170.7
Q ss_pred ceEEEEeeCCCCCCchHHHHHHHHhcCCcc---c-eeccccccCCccc--ceeeeecccccccCcccccCcchhHH--HH
Q psy5984 195 YTLAVMHIGAPACGMNAAVRSFCNDNYNTD---F-IYRLYSEEGKGLF--SARQNVLGHMQQGGSPSPFDRNMGTK--QA 266 (512)
Q Consensus 195 ~~iai~~~G~~a~GMNaa~ra~~~~~~~~~---~-i~~~~~~~~~g~~--~~~~~V~G~~~rGGs~~~~~R~~~~~--~~ 266 (512)
+||||+++||||||||+|+|++++.....+ + +++||.++.++.+ .+|.+|.+|.+.|||.+++.|..+.. ..
T Consensus 2 k~i~Il~sGG~apG~Na~i~~~~~~~~~~g~~v~g~~~G~~GL~~~~~~~l~~~~v~~~~~~gGs~LgtsR~~~~~~~~~ 81 (320)
T PRK03202 2 KRIGVLTSGGDAPGMNAAIRAVVRTAISEGLEVYGIYDGYAGLLEGDIVKLDLKSVSDIINRGGTILGSARFPEFKDEEG 81 (320)
T ss_pred cEEEEECCCCCcHHHHHHHHHHHHHHHHCCCeEEEEecChhhhcCCCEEECCHHHHhhHHhCCCcccccCCCCCcCCHHH
Confidence 699999999999999999999998865554 2 7778865544322 36889999999999999999976532 11
Q ss_pred H--------------------HHHHHHhHHHHHHhHhhhhcCCcccccccccccCCCCceeeccccCccccccccc----
Q psy5984 267 A--------------------NTAYQAGIQLVEARSDYKEFCIPMVVIPSTISNNVPGTEFSLGCDTALNEITEEG---- 322 (512)
Q Consensus 267 ~--------------------~~~~~a~~~L~~a~~~y~~~~ipmv~iPatIsNnvpgte~slG~DTaln~~~~~~---- 322 (512)
. +..+.++..|. ++++|+|+||+|||||+||||+|+|+|||+|.++++.
T Consensus 82 ~~~~~~~l~~~~Id~Li~IGGd~s~~~a~~L~-------e~~i~vigiPkTIDNDl~gtd~s~Gf~TA~~~~~~~i~~l~ 154 (320)
T PRK03202 82 RAKAIENLKKLGIDALVVIGGDGSYMGAKRLT-------EHGIPVIGLPGTIDNDIAGTDYTIGFDTALNTAVEAIDRLR 154 (320)
T ss_pred HHHHHHHHHHcCCCEEEEeCChHHHHHHHHHH-------hcCCcEEEecccccCCCCCCccCcCHHHHHHHHHHHHHHHH
Confidence 1 22333333443 3589999999999999999999999999999987762
Q ss_pred ------ceEEEEecCCCcchhhHHHHHHHHHHHHcCCEEEEE-ecchhhhcccceEecChhccc----ccc---ccCCce
Q psy5984 323 ------YTLAVMHIGAPACGMNAAVRSFVRNCIYRGDTVIGI-HDGVEGLVAGNVQIMQWSDVT----GWV---GQGGAM 388 (512)
Q Consensus 323 ------~~iaIi~sGg~apG~NAair~~v~~~~~~G~~v~g~-~~G~~GL~~g~~~~l~~~~v~----~~~---~~GGsi 388 (512)
.|+.|++.-|-.||.-|+..++. .|..+.-+ +. +++.+++. ... ..-+.+
T Consensus 155 ~~a~s~~rv~iVEvMGR~~G~LAl~~ala-----~~a~~iliPE~-----------~~~~~~l~~~i~~r~~~g~~~~vi 218 (320)
T PRK03202 155 DTASSHERVFIVEVMGRHAGDLALHAGIA-----GGAEVILIPEV-----------PFDIEELCAKIKKGRERGKKHAII 218 (320)
T ss_pred HHHhccCCEEEEEECCCChHHHHHHHHHh-----cCCCEEEeCCC-----------CCCHHHHHHHHHHHHHhcCCcEEE
Confidence 35555555555555555433322 12111111 11 11111110 000 112234
Q ss_pred eecccCCCCCcHHHHHHHHHHc-CCceEEEecCccchhhhhhhcCCCccccCchhHHHHHHHHHHHHHHHhhhcCCCCce
Q psy5984 389 LGTKRTLPEKKLPQIAAKLKEL-KIQALLIIGGFEDEQGHMQQGGSPSPFDRNMGTKQAANTVEWMIDQLKKCTKPDGSV 467 (512)
Q Consensus 389 Lgt~R~~p~~~~~~i~~~l~~~-~i~~LvviGGf~s~lGh~QqGG~PstiDr~lG~~tA~~ai~~l~~~l~~~a~s~~rv 467 (512)
+-++... ..+.+++.|++. +++. -.+.+||+||||.|+++||.+|++++.+|++.+.+
T Consensus 219 vvsEg~~---~~~~l~~~i~~~~~~~~------r~~~lG~~qRgg~ps~~Dr~~a~~lG~~Av~~~~~------------ 277 (320)
T PRK03202 219 VVAEGVM---PAEELAKEIEERTGLET------RVTVLGHIQRGGSPTAFDRVLASRMGAHAVELLLE------------ 277 (320)
T ss_pred EEeCCCC---CHHHHHHHHHHHhCCce------EEcccchhhcCCCCCHHHHHHHHHHHHHHHHHHHc------------
Confidence 4333332 133455555543 1111 11359999999999999999999999999999876
Q ss_pred eecCCCcEEEEEeecCceeEeeccchh
Q psy5984 468 FTDSPETAVLMGVIRRQYCFTPLQTLK 494 (512)
Q Consensus 468 ~~~~~~~a~vigl~g~~~~~~Pl~~l~ 494 (512)
+.+.+++++.+.++.++|++++.
T Consensus 278 ----g~~~~~v~~~~~~~~~vpl~~v~ 300 (320)
T PRK03202 278 ----GKGGRMVGIQNNKIVHVPIEEAV 300 (320)
T ss_pred ----CCCCeEEEEECCEEEEEeHHHHH
Confidence 35789999999999999999887
No 13
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=99.97 E-value=3.6e-32 Score=278.54 Aligned_cols=170 Identities=31% Similarity=0.484 Sum_probs=156.7
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHcCCEEEEEecchhhhcccceEecChhccccccccCCceeecccCCC---CCc
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYRGDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGAMLGTKRTLP---EKK 399 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGsiLgt~R~~p---~~~ 399 (512)
+||+|+++||||||||+++|++++.+..+|++|||+++||.||+++++.+|+|.++.+|.++||++|||+|+.+ ++.
T Consensus 1 ~~IaIltsGG~apGmNa~i~~vv~~a~~~g~~v~G~~~G~~GL~~~~~~~l~~~~v~~~~~~gGt~LgtsR~~~~~~~~~ 80 (317)
T cd00763 1 KRIGVLTSGGDAPGMNAAIRGVVRSAIAEGLEVYGIRDGYAGLIAGDIVPLDRYSVSDIINRGGTFLGSARFPEFKDEEG 80 (317)
T ss_pred CEEEEEccCCCcHHHHHHHHHHHHHHHHCCCEEEEEecCHHHhcCCCeEeCCHHHhhhHHhCCCeeeccCCCCccCCHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999865 235
Q ss_pred HHHHHHHHHHcCCceEEEecCccchhhhhh-------hcCCCccccCc-------hhHHHHHHHHHHHHHHHhhhcCCCC
Q psy5984 400 LPQIAAKLKELKIQALLIIGGFEDEQGHMQ-------QGGSPSPFDRN-------MGTKQAANTVEWMIDQLKKCTKPDG 465 (512)
Q Consensus 400 ~~~i~~~l~~~~i~~LvviGGf~s~lGh~Q-------qGG~PstiDr~-------lG~~tA~~ai~~l~~~l~~~a~s~~ 465 (512)
+++++++|++++||+|++||||||+.+..+ -.|+|+||||| +||+||++.+...++.++.++.+|.
T Consensus 81 ~~~~~~~l~~~~Id~Li~IGGdgs~~~a~~L~e~~i~vigiPkTIDNDi~gtd~t~Gf~TA~~~~~~~i~~i~~ta~s~~ 160 (317)
T cd00763 81 QAKAIEQLKKHGIDALVVIGGDGSYMGAMRLTEHGFPCVGLPGTIDNDIPGTDYTIGFDTALNTVVEAIDRIRDTSSSHQ 160 (317)
T ss_pred HHHHHHHHHHcCCCEEEEECCchHHHHHHHHHHcCCCEEEecccccCCCCCCccCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 899999999999999999999999977642 24999999995 7999999999999999999999999
Q ss_pred ceee------cCCCcEEEEEee-cCceeEeeccc
Q psy5984 466 SVFT------DSPETAVLMGVI-RRQYCFTPLQT 492 (512)
Q Consensus 466 rv~~------~~~~~a~vigl~-g~~~~~~Pl~~ 492 (512)
|+|+ ++||+|...++. +.+++++|...
T Consensus 161 rv~ivEvMGR~~G~LA~~~ala~ga~~iliPE~~ 194 (317)
T cd00763 161 RISVVEVMGRHCGDIALAAGIAGGAEFIVIPEAE 194 (317)
T ss_pred CEEEEEeCCCChHHHHHHHHHHcCCCEEEeCCCC
Confidence 9998 789999999986 78999999653
No 14
>PLN02884 6-phosphofructokinase
Probab=99.97 E-value=3.8e-32 Score=286.04 Aligned_cols=278 Identities=15% Similarity=0.148 Sum_probs=179.9
Q ss_pred cceEEEEeeCCCCCCchHHHHHHHHhcCCcc----c-eeccccccCCccc----ceeeeecccccccCcccccCcchhHH
Q psy5984 194 GYTLAVMHIGAPACGMNAAVRSFCNDNYNTD----F-IYRLYSEEGKGLF----SARQNVLGHMQQGGSPSPFDRNMGTK 264 (512)
Q Consensus 194 ~~~iai~~~G~~a~GMNaa~ra~~~~~~~~~----~-i~~~~~~~~~g~~----~~~~~V~G~~~rGGs~~~~~R~~~~~ 264 (512)
.+||||||+||||||||+|||++|+.....+ + +++||.|+.++-+ .+|.+|.+|.++|||.+++.|..+..
T Consensus 53 ~~rIaIltsGGdaPGmNa~Iravv~~a~~~g~~~V~Gi~~G~~GL~~~~~~~~~l~~~~v~~i~~~GGt~LGtsR~~~~~ 132 (411)
T PLN02884 53 EVKAAIVTCGGLCPGLNDVIRQIVFTLEIYGVKNIVGIPFGYRGFFEKGLSEMPLSRKVVQNIHLSGGSLLGVSRGGAKT 132 (411)
T ss_pred ceEEEEEcCCCCCccHhHHHHHHHHHHHHcCCcEEEEEccCHHHHhCCCceeeecCHHHHHHHHhCCCceeccCCCCccH
Confidence 5999999999999999999999998854333 2 7788876654431 24778999999999999999977654
Q ss_pred HHH-----------------HHHHHHhHHHHHHhHhhhhcCCcccccccccccCCCCceeeccccCccccccccc-----
Q psy5984 265 QAA-----------------NTAYQAGIQLVEARSDYKEFCIPMVVIPSTISNNVPGTEFSLGCDTALNEITEEG----- 322 (512)
Q Consensus 265 ~~~-----------------~~~~~a~~~L~~a~~~y~~~~ipmv~iPatIsNnvpgte~slG~DTaln~~~~~~----- 322 (512)
+-. +..+.++..|.+.- .+..++||+|+||+|||||+|+||||+|+|||+|.++++.
T Consensus 133 ~~i~~~L~~~~Id~LivIGGdgS~~~a~~L~~~~-~~~g~~i~vIGIPkTIDNDi~~tD~TiGFdTAv~~~~~ai~~l~~ 211 (411)
T PLN02884 133 SDIVDSIEARGINMLFVLGGNGTHAGANAIHNEC-RKRKMKVSVVGVPKTIDNDILLMDKTFGFDTAVEEAQRAINSAYI 211 (411)
T ss_pred HHHHHHHHHcCCCEEEEECCchHHHHHHHHHHHH-HHcCCCceEEeccccccCCCcCcccCCCHHHHHHHHHHHHHHHHH
Confidence 322 22344445555431 1234679999999999999999999999999999977762
Q ss_pred ------ceEEEEecCCCcchhhHHHHHHHHHHHHcC-CE-EEEEecchh-----hhcccceEecChhcccc-ccccCCce
Q psy5984 323 ------YTLAVMHIGAPACGMNAAVRSFVRNCIYRG-DT-VIGIHDGVE-----GLVAGNVQIMQWSDVTG-WVGQGGAM 388 (512)
Q Consensus 323 ------~~iaIi~sGg~apG~NAair~~v~~~~~~G-~~-v~g~~~G~~-----GL~~g~~~~l~~~~v~~-~~~~GGsi 388 (512)
.++.|++.-|-.+|.-|+..+++ .| .. +|-.+.-|. ++++ .+.. +..++-++
T Consensus 212 tA~s~~~rv~iVEvMGR~aG~LAl~aalA-----~g~ad~ilIPE~~f~~~~~~~~~~---------~i~~~~~~k~~~i 277 (411)
T PLN02884 212 EAHSAYHGIGLVKLMGRSSGFIAMHASLA-----SGQVDICLIPEVPFTLDGPNGVLR---------HLEHLIETKGSAV 277 (411)
T ss_pred hhhccCCcEEEEEeCCCCHHHHHHHHHHh-----cCCCCEEEeCCCCCCcccHHHHHH---------HHHHHHhcCCcEE
Confidence 34666666666666655443332 12 11 111111111 1111 0110 01111111
Q ss_pred -eecccC---CCC-------------CcH-HHHHHHHHHc----CC--ceEEEecCccchhhhhhhcCCCccccCchhHH
Q psy5984 389 -LGTKRT---LPE-------------KKL-PQIAAKLKEL----KI--QALLIIGGFEDEQGHMQQGGSPSPFDRNMGTK 444 (512)
Q Consensus 389 -Lgt~R~---~p~-------------~~~-~~i~~~l~~~----~i--~~LvviGGf~s~lGh~QqGG~PstiDr~lG~~ 444 (512)
+-++-. ..+ ... +.+++.|+++ +. +.-+ ..+||+|+||.|++.||.++++
T Consensus 278 IVVAEG~g~~~~~~~~~~Da~G~~~l~~~~~~La~~i~~~~~~~g~~~~~r~------~~lGy~qRgg~p~a~Dr~la~~ 351 (411)
T PLN02884 278 VCVAEGAGQDLLQKTNATDASGNPVLGDIGVHLQQEIKKHFKDIGVPADVKY------IDPTYMIRACRANASDAILCTV 351 (411)
T ss_pred EEEecccccccccccccccccCCcccCcHHHHHHHHHHHHhhccCCCceEEE------ccCCccccCCCCCHHHHHHHHH
Confidence 111110 000 012 2455555543 22 1111 2599999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCceeecCCCcEEEEEeecCceeEeeccchhhhcCcccCCCcccCCC
Q psy5984 445 QAANTVEWMIDQLKKCTKPDGSVFTDSPETAVLMGVIRRQYCFTPLQTLKKETNFECKSCNGQTSQ 510 (512)
Q Consensus 445 tA~~ai~~l~~~l~~~a~s~~rv~~~~~~~a~vigl~g~~~~~~Pl~~l~~~~d~~~r~~~~~ww~ 510 (512)
++..|++.+.+ +.+.+++++.+.++.++|++++.... +.=.|+..||+
T Consensus 352 lG~~AV~~~~~----------------G~sg~mV~l~~~~~~~vpl~~v~~~~--k~vd~~~~~~~ 399 (411)
T PLN02884 352 LGQNAVHGAFA----------------GFSGITVGICNTHYVYLPIPEVIAYP--RRVDPNSRMWH 399 (411)
T ss_pred HHHHHHHHHHc----------------CCCCeEEEEECCEEEEEeHHHHhcCC--CCCCCCcHHHH
Confidence 99999998876 36789999999999999999887432 22234566775
No 15
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=99.97 E-value=4.4e-32 Score=275.88 Aligned_cols=170 Identities=29% Similarity=0.497 Sum_probs=156.3
Q ss_pred eEEEEecCCCcchhhHHHHHHHHHHHHcCCEEEEEecchhhhcccceEecChhccccccccCCceeecccCCCC---CcH
Q psy5984 324 TLAVMHIGAPACGMNAAVRSFVRNCIYRGDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGAMLGTKRTLPE---KKL 400 (512)
Q Consensus 324 ~iaIi~sGg~apG~NAair~~v~~~~~~G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGsiLgt~R~~p~---~~~ 400 (512)
||||+++||||||||+++|++++.+..+|++|||+++||.||+++++..|+|.++.+|.++||++|||+|+.+. +.+
T Consensus 1 rIaIltsGG~apG~Na~i~~vv~~a~~~g~~v~G~~~G~~GL~~~~~~~l~~~~v~~~~~~gGt~LgtsR~~~~~~~~~~ 80 (301)
T TIGR02482 1 KIGILTSGGDAPGMNAAIRAVVRTAIYHGFEVYGIRRGYKGLINGEIKPLESKNVSGIIHRGGTILGTARCPEFKTEEGR 80 (301)
T ss_pred CEEEEccCCCcHHHHHHHHHHHHHHHHCCCEEEEEecCHHHhcCCCeEeCCHHHHhhHHhCCCceeccCCCCccCCHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999998763 358
Q ss_pred HHHHHHHHHcCCceEEEecCccchhhhhh--------hcCCCccccCc-------hhHHHHHHHHHHHHHHHhhhcCCCC
Q psy5984 401 PQIAAKLKELKIQALLIIGGFEDEQGHMQ--------QGGSPSPFDRN-------MGTKQAANTVEWMIDQLKKCTKPDG 465 (512)
Q Consensus 401 ~~i~~~l~~~~i~~LvviGGf~s~lGh~Q--------qGG~PstiDr~-------lG~~tA~~ai~~l~~~l~~~a~s~~ 465 (512)
++++++|++++||+|++||||+|+.+..+ -.|+|+||||| +||+||++.+...+++++.++.||+
T Consensus 81 ~~~~~~l~~~~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPkTIDNDl~~td~s~GfdTA~~~~~~~i~~i~~ta~s~~ 160 (301)
T TIGR02482 81 QKAVENLKKLGIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPGTIDNDIPGTDYTIGFDTALNTIIDAVDKIRDTATSHE 160 (301)
T ss_pred HHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHhhCCCEEeecccccCCCcCcccCcChhHHHHHHHHHHHHHHHHhhcCC
Confidence 89999999999999999999999877532 24999999995 7999999999999999999899999
Q ss_pred ceee------cCCCcEEEEEee-cCceeEeeccch
Q psy5984 466 SVFT------DSPETAVLMGVI-RRQYCFTPLQTL 493 (512)
Q Consensus 466 rv~~------~~~~~a~vigl~-g~~~~~~Pl~~l 493 (512)
|+|+ ++||+|...++. +.+++++|....
T Consensus 161 rv~ivEvMGR~~G~lAl~~~la~gad~iliPE~~~ 195 (301)
T TIGR02482 161 RAFVIEVMGRHAGDLALYSGIATGAEIIIIPEFDY 195 (301)
T ss_pred CEEEEEeCCCCHHHHHHHHHHHcCCCEEEECCCCC
Confidence 9998 789999999996 689999996543
No 16
>PRK14071 6-phosphofructokinase; Provisional
Probab=99.97 E-value=1.4e-31 Score=278.77 Aligned_cols=264 Identities=19% Similarity=0.202 Sum_probs=170.5
Q ss_pred cceEEEEeeCCCCCCchHHHHHHHHhcCCc-c---c-eeccccccCCc--cc--ceeeeecccccccCcccccCcc-hhH
Q psy5984 194 GYTLAVMHIGAPACGMNAAVRSFCNDNYNT-D---F-IYRLYSEEGKG--LF--SARQNVLGHMQQGGSPSPFDRN-MGT 263 (512)
Q Consensus 194 ~~~iai~~~G~~a~GMNaa~ra~~~~~~~~-~---~-i~~~~~~~~~g--~~--~~~~~V~G~~~rGGs~~~~~R~-~~~ 263 (512)
.+||||+|+||||||||+|+|++++...+. + + +++||.|+.++ .+ .+|.+|.+|.++|||.++|.|. .+.
T Consensus 4 ~~~I~IltsGG~apGmNa~i~~vv~~a~~~~g~~v~G~~~G~~GL~~~~~~~~~l~~~~v~~~~~~GGt~LgtsR~~~~~ 83 (360)
T PRK14071 4 KKRIGILTSGGDCAGLNAVIRAVVHRARGTYGWEVIGIRDATQGLMARPPQYIELDLDQVDDLLRMGGTILGTTNKGDPF 83 (360)
T ss_pred CCEEEEECCCCCchhHHHHHHHHHHHHHhcCCCEEEEEecChHHHhcCCCCeEECCHHHHhhHHhCCCceeccCCCCCcc
Confidence 579999999999999999999999887654 4 2 77888765544 21 3578899999999999999852 221
Q ss_pred H---------HHHHHHHHHhH--------------HHHHHhHhhhhcCCcccccccccccCCCCceeeccccCccccccc
Q psy5984 264 K---------QAANTAYQAGI--------------QLVEARSDYKEFCIPMVVIPSTISNNVPGTEFSLGCDTALNEITE 320 (512)
Q Consensus 264 ~---------~~~~~~~~a~~--------------~L~~a~~~y~~~~ipmv~iPatIsNnvpgte~slG~DTaln~~~~ 320 (512)
. .....+++.+. -+..+.+..+.+.||+|+||+|||||+|+||+|+|+|||+|.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~~~~~i~vIgiPkTIDNDl~~td~t~Gf~TA~~~~~~ 163 (360)
T PRK14071 84 AFPMPDGSLRDRSQEIIDGYHSLGLDALIGIGGDGSLAILRRLAQQGGINLVGIPKTIDNDVGATEVSIGFDTAVNIATE 163 (360)
T ss_pred ccccccccchHHHHHHHHHHHHcCCCEEEEECChhHHHHHHHHHHhcCCcEEEecccccCCCcCcccCcChhHHHHHHHH
Confidence 1 11111111110 022222222235899999999999999999999999999999776
Q ss_pred cc----------ceEEEEecCCCcchhhHHHHHHHHHHHHcCCE-EEEEecchhhhcccceEecChhcc----ccccc--
Q psy5984 321 EG----------YTLAVMHIGAPACGMNAAVRSFVRNCIYRGDT-VIGIHDGVEGLVAGNVQIMQWSDV----TGWVG-- 383 (512)
Q Consensus 321 ~~----------~~iaIi~sGg~apG~NAair~~v~~~~~~G~~-v~g~~~G~~GL~~g~~~~l~~~~v----~~~~~-- 383 (512)
+. .|+.|++.-|--||.-|+..++. .|.. +|-.+.. ++.+.+ .....
T Consensus 164 ~id~i~~ta~s~~rv~ivEvMGR~~G~LAl~~~la-----~ga~~iliPE~~-----------~~~~~l~~~i~~~~~~~ 227 (360)
T PRK14071 164 ALDRLHFTAASHNRVMILEVMGRDAGHIALAAGIA-----GGADVILIPEIP-----------YTLENVCKKIRERQEEG 227 (360)
T ss_pred HHHHHHhhhcccCCEEEEEECCCCccHHHHHhHhh-----cCCCEEEECCCC-----------CCHHHHHHHHHHHHHcC
Confidence 53 35666666666666665443332 1211 1111111 111111 11001
Q ss_pred cC-CceeecccCCCC----------------Cc-HHHHHHHHHHc-CCceEEEecCccchhhhhhhcCCCccccCchhHH
Q psy5984 384 QG-GAMLGTKRTLPE----------------KK-LPQIAAKLKEL-KIQALLIIGGFEDEQGHMQQGGSPSPFDRNMGTK 444 (512)
Q Consensus 384 ~G-GsiLgt~R~~p~----------------~~-~~~i~~~l~~~-~i~~LvviGGf~s~lGh~QqGG~PstiDr~lG~~ 444 (512)
.+ +.++-++-...+ .. -+.+++.|++. +++.- -+.+||+||||.|+++||.+|++
T Consensus 228 ~~~~iivvsEG~~~~~g~~~~~~d~~g~~~~~~~~~~l~~~i~~~~g~~~r------~~~lG~~qRgg~ps~~Dr~~a~~ 301 (360)
T PRK14071 228 KNFCLVVVSEAVRTEEGEQVTKTQALGEDRYGGIGQYLAEQIAERTGAETR------VTVLGHIQRGGIPSPRDRLLASA 301 (360)
T ss_pred CCeEEEEEcCCCcccccccccccccccccccCcHHHHHHHHHHHhcCCCee------EEecChhhcCCCCChHHHHHHHH
Confidence 11 122222221100 01 23356666543 22211 13599999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCceeecCCCcEEEEEeecCceeEeeccchhh
Q psy5984 445 QAANTVEWMIDQLKKCTKPDGSVFTDSPETAVLMGVIRRQYCFTPLQTLKK 495 (512)
Q Consensus 445 tA~~ai~~l~~~l~~~a~s~~rv~~~~~~~a~vigl~g~~~~~~Pl~~l~~ 495 (512)
++.+|++.+.+ +.+.+++++.+.++.++|++++..
T Consensus 302 lG~~Av~~~~~----------------G~t~~mv~~~~~~~~~vpl~~v~~ 336 (360)
T PRK14071 302 FGVAAVDLIAQ----------------GKFDRMVAWQNRQVVSVPIAEAIA 336 (360)
T ss_pred HHHHHHHHHHc----------------CCCCEEEEEECCEEEEEeHHHHhc
Confidence 99999999876 356789999999999999998875
No 17
>PRK03202 6-phosphofructokinase; Provisional
Probab=99.97 E-value=2.6e-31 Score=272.55 Aligned_cols=170 Identities=31% Similarity=0.465 Sum_probs=157.5
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHcCCEEEEEecchhhhcccceEecChhccccccccCCceeecccCCCC---Cc
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYRGDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGAMLGTKRTLPE---KK 399 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGsiLgt~R~~p~---~~ 399 (512)
+||+|+++||||||||++++++++.+..+|++|||+++||.||+++++.+|+|+++.+|.++||++|||+|+.+. +.
T Consensus 2 k~i~Il~sGG~apG~Na~i~~~~~~~~~~g~~v~g~~~G~~GL~~~~~~~l~~~~v~~~~~~gGs~LgtsR~~~~~~~~~ 81 (320)
T PRK03202 2 KRIGVLTSGGDAPGMNAAIRAVVRTAISEGLEVYGIYDGYAGLLEGDIVKLDLKSVSDIINRGGTILGSARFPEFKDEEG 81 (320)
T ss_pred cEEEEECCCCCcHHHHHHHHHHHHHHHHCCCeEEEEecChhhhcCCCEEECCHHHHhhHHhCCCcccccCCCCCcCCHHH
Confidence 689999999999999999999999999999999999999999999999999999999999999999999998763 35
Q ss_pred HHHHHHHHHHcCCceEEEecCccchhhhhh-------hcCCCccccCc-------hhHHHHHHHHHHHHHHHhhhcCCCC
Q psy5984 400 LPQIAAKLKELKIQALLIIGGFEDEQGHMQ-------QGGSPSPFDRN-------MGTKQAANTVEWMIDQLKKCTKPDG 465 (512)
Q Consensus 400 ~~~i~~~l~~~~i~~LvviGGf~s~lGh~Q-------qGG~PstiDr~-------lG~~tA~~ai~~l~~~l~~~a~s~~ 465 (512)
+++++++|++++||+|++||||+|+.+..+ -.|+|+||||| +||+||++.+...+++++.++.||+
T Consensus 82 ~~~~~~~l~~~~Id~Li~IGGd~s~~~a~~L~e~~i~vigiPkTIDNDl~gtd~s~Gf~TA~~~~~~~i~~l~~~a~s~~ 161 (320)
T PRK03202 82 RAKAIENLKKLGIDALVVIGGDGSYMGAKRLTEHGIPVIGLPGTIDNDIAGTDYTIGFDTALNTAVEAIDRLRDTASSHE 161 (320)
T ss_pred HHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHhcCCcEEEecccccCCCCCCccCcCHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999977632 34999999995 7999999999999999999999999
Q ss_pred ceee------cCCCcEEEEEee-cCceeEeeccc
Q psy5984 466 SVFT------DSPETAVLMGVI-RRQYCFTPLQT 492 (512)
Q Consensus 466 rv~~------~~~~~a~vigl~-g~~~~~~Pl~~ 492 (512)
|+|+ ++||+|...+++ +.+++++|...
T Consensus 162 rv~iVEvMGR~~G~LAl~~ala~~a~~iliPE~~ 195 (320)
T PRK03202 162 RVFIVEVMGRHAGDLALHAGIAGGAEVILIPEVP 195 (320)
T ss_pred CEEEEEECCCChHHHHHHHHHhcCCCEEEeCCCC
Confidence 9998 789999999996 78999999653
No 18
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=99.97 E-value=3.3e-31 Score=272.38 Aligned_cols=169 Identities=30% Similarity=0.440 Sum_probs=155.2
Q ss_pred eEEEEecCCCcchhhHHHHHHHHHHH-HcCCEEEEEecchhhhcccceEec-ChhccccccccCCceeecccCCCC----
Q psy5984 324 TLAVMHIGAPACGMNAAVRSFVRNCI-YRGDTVIGIHDGVEGLVAGNVQIM-QWSDVTGWVGQGGAMLGTKRTLPE---- 397 (512)
Q Consensus 324 ~iaIi~sGg~apG~NAair~~v~~~~-~~G~~v~g~~~G~~GL~~g~~~~l-~~~~v~~~~~~GGsiLgt~R~~p~---- 397 (512)
||||+++||||||||+++|++++.++ .+|++|||+++||.||+++++.++ +|+++.+|.++||++|||+|+.+.
T Consensus 1 ~IgIltsGG~apGmN~~i~~~v~~a~~~~g~~v~g~~~G~~GL~~~~~~~l~~~~~v~~~~~~GGt~LgtsR~~~~~~~~ 80 (324)
T TIGR02483 1 RIGVLTGGGDCPGLNAVIRGVVRRAIAEYGWEVIGIRDGWRGLLEGDTVPLLDLEDVRGILPRGGTILGSSRTNPFKYEE 80 (324)
T ss_pred CEEEECCCCCcHHHHHHHHHHHHHHHHcCCceEEEEccCHHHhCCCCeEecCCHHHHHHHHhCCCccccCCCCCccccCH
Confidence 68999999999999999999999998 569999999999999999999999 999999999999999999999873
Q ss_pred CcHHHHHHHHHHcCCceEEEecCccchhhhhh---h----cCCCccccCc-------hhHHHHHHHHHHHHHHHhhhcCC
Q psy5984 398 KKLPQIAAKLKELKIQALLIIGGFEDEQGHMQ---Q----GGSPSPFDRN-------MGTKQAANTVEWMIDQLKKCTKP 463 (512)
Q Consensus 398 ~~~~~i~~~l~~~~i~~LvviGGf~s~lGh~Q---q----GG~PstiDr~-------lG~~tA~~ai~~l~~~l~~~a~s 463 (512)
+.+++++++|++++||+|++||||+|+.+..+ + .|+|+||||| +||+||++.+..+++.++.++.|
T Consensus 81 ~~~~~~~~~l~~~~Id~LivIGGdgS~~~a~~L~~~gi~vigiPkTIDNDl~gtd~tiGfdTA~~~~~~~i~~i~~ta~S 160 (324)
T TIGR02483 81 DGDDKIVANLKELGLDALIAIGGDGTLGIARRLADKGLPVVGVPKTIDNDLEATDYTFGFDTAVEIATEALDRLHTTAES 160 (324)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCchHHHHHHHHHhcCCCEEeeccccCCCCcCCccCcCHHHHHHHHHHHHHHHHHHHhh
Confidence 35899999999999999999999999977632 2 4899999995 79999999999999999999999
Q ss_pred CCceee------cCCCcEEEEEee-cCceeEeeccc
Q psy5984 464 DGSVFT------DSPETAVLMGVI-RRQYCFTPLQT 492 (512)
Q Consensus 464 ~~rv~~------~~~~~a~vigl~-g~~~~~~Pl~~ 492 (512)
|+|+|+ +++|+|+..++. +.+++++|...
T Consensus 161 ~~r~~ivEvMGR~~G~LAl~~ala~~a~~iliPE~~ 196 (324)
T TIGR02483 161 HHRVMVVEVMGRHAGWIALHSGIAGGADVILIPEIP 196 (324)
T ss_pred cCCEEEEEEcCCChhHHHHHHHhccCCCEEEecCCC
Confidence 999998 789999999996 68999999653
No 19
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=99.97 E-value=2.4e-31 Score=273.36 Aligned_cols=259 Identities=21% Similarity=0.260 Sum_probs=168.9
Q ss_pred eEEEEeeCCCCCCchHHHHHHHHhcC-Ccc---c-eeccccccCCcc--cc-eeeeecccccccCcccccCcchhHH---
Q psy5984 196 TLAVMHIGAPACGMNAAVRSFCNDNY-NTD---F-IYRLYSEEGKGL--FS-ARQNVLGHMQQGGSPSPFDRNMGTK--- 264 (512)
Q Consensus 196 ~iai~~~G~~a~GMNaa~ra~~~~~~-~~~---~-i~~~~~~~~~g~--~~-~~~~V~G~~~rGGs~~~~~R~~~~~--- 264 (512)
||||||+|+||||||+|+|++++... +.+ + +++||.++.++. .. +|.+|.+|.++|||.+++.|..+..
T Consensus 1 ~IgIltsGG~apGmN~~i~~~v~~a~~~~g~~v~g~~~G~~GL~~~~~~~l~~~~~v~~~~~~GGt~LgtsR~~~~~~~~ 80 (324)
T TIGR02483 1 RIGVLTGGGDCPGLNAVIRGVVRRAIAEYGWEVIGIRDGWRGLLEGDTVPLLDLEDVRGILPRGGTILGSSRTNPFKYEE 80 (324)
T ss_pred CEEEECCCCCcHHHHHHHHHHHHHHHHcCCceEEEEccCHHHhCCCCeEecCCHHHHHHHHhCCCccccCCCCCccccCH
Confidence 69999999999999999999998765 323 3 778887665442 23 6889999999999999999976532
Q ss_pred HHHHHHHHHhHH--------------HHHHhHhhhhcCCcccccccccccCCCCceeeccccCccccccccc--------
Q psy5984 265 QAANTAYQAGIQ--------------LVEARSDYKEFCIPMVVIPSTISNNVPGTEFSLGCDTALNEITEEG-------- 322 (512)
Q Consensus 265 ~~~~~~~~a~~~--------------L~~a~~~y~~~~ipmv~iPatIsNnvpgte~slG~DTaln~~~~~~-------- 322 (512)
.....+++.+.. +..+... .+.++|+|+||+|||||+||||+|+|+|||+|.+++..
T Consensus 81 ~~~~~~~~~l~~~~Id~LivIGGdgS~~~a~~L-~~~gi~vigiPkTIDNDl~gtd~tiGfdTA~~~~~~~i~~i~~ta~ 159 (324)
T TIGR02483 81 DGDDKIVANLKELGLDALIAIGGDGTLGIARRL-ADKGLPVVGVPKTIDNDLEATDYTFGFDTAVEIATEALDRLHTTAE 159 (324)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCchHHHHHHHH-HhcCCCEEeeccccCCCCcCCccCcCHHHHHHHHHHHHHHHHHHHh
Confidence 222222222211 2222222 22479999999999999999999999999999876652
Q ss_pred --ceEEEEecCCCcchhhHHHHHHHHHHHHcCCEEE-EEecchhhhcccceEecChhcc----ccccc--c-CCceeecc
Q psy5984 323 --YTLAVMHIGAPACGMNAAVRSFVRNCIYRGDTVI-GIHDGVEGLVAGNVQIMQWSDV----TGWVG--Q-GGAMLGTK 392 (512)
Q Consensus 323 --~~iaIi~sGg~apG~NAair~~v~~~~~~G~~v~-g~~~G~~GL~~g~~~~l~~~~v----~~~~~--~-GGsiLgt~ 392 (512)
.|+.|++.-|-.||.-|+..++. .|..+. -.+.. ++++++ ..... . -+.++-++
T Consensus 160 S~~r~~ivEvMGR~~G~LAl~~ala-----~~a~~iliPE~~-----------~~~~~l~~~v~~~~~~g~~~~vvvvsE 223 (324)
T TIGR02483 160 SHHRVMVVEVMGRHAGWIALHSGIA-----GGADVILIPEIP-----------FDIDSVCEKVRERFARGKRFAIVVVAE 223 (324)
T ss_pred hcCCEEEEEEcCCChhHHHHHHHhc-----cCCCEEEecCCC-----------CCHHHHHHHHHHHHHhCCCceEEEEec
Confidence 35666666666666655443332 122211 11111 122211 11111 1 12233322
Q ss_pred cCCCC-------------------Cc-HHHHHHHHHHc-CCceEEEecCccchhhhhhhcCCCccccCchhHHHHHHHHH
Q psy5984 393 RTLPE-------------------KK-LPQIAAKLKEL-KIQALLIIGGFEDEQGHMQQGGSPSPFDRNMGTKQAANTVE 451 (512)
Q Consensus 393 R~~p~-------------------~~-~~~i~~~l~~~-~i~~LvviGGf~s~lGh~QqGG~PstiDr~lG~~tA~~ai~ 451 (512)
-.... .. -+.+++.+++. +++ -..+.+||+||||.|+++||.+|++++.+|++
T Consensus 224 G~~~~~~~~~~~~~~~d~~gh~~~~~~~~~l~~~i~~~~g~~------~r~~~lG~~qRgg~ps~~Dr~~a~~lG~~Av~ 297 (324)
T TIGR02483 224 GAKPKGGEMVVQEGVKDAFGHVRLGGIGNWLAEEIERRTGIE------TRATVLGHLQRGGSPSAFDRVLATRFGVAAVD 297 (324)
T ss_pred CccccccchhccccccccccCcccCcHHHHHHHHHHHhcCCc------ceECCcChhhcCCCCCHHHHHHHHHHHHHHHH
Confidence 21100 01 22355555543 221 11246999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCceeecCCCcEEEEEeecCceeEeeccch
Q psy5984 452 WMIDQLKKCTKPDGSVFTDSPETAVLMGVIRRQYCFTPLQTL 493 (512)
Q Consensus 452 ~l~~~l~~~a~s~~rv~~~~~~~a~vigl~g~~~~~~Pl~~l 493 (512)
.+.+ +.+.+++++.+.+++++|++++
T Consensus 298 ~~~~----------------g~~~~mv~~~~~~~~~~p~~~~ 323 (324)
T TIGR02483 298 LVHE----------------GQFGHMVALRGTDIVYVPIAEA 323 (324)
T ss_pred HHHc----------------CCCCeEEEEECCEEEEeeHHHh
Confidence 8876 3567899999999999999875
No 20
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes []. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6- bisphosphate, a key regulatory step in the glycolytic pathway [, ]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains []). PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (alpha/beta) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6- bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react []. Deficiency in PFK leads to glycogenosis type VII (Tauri's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise []. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [].; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005945 6-phosphofructokinase complex; PDB: 3O8O_E 3OPY_H 1PFK_A 2PFK_D 1MTO_F 3U39_C 6PFK_A 4PFK_A 3PFK_A 3HNO_B ....
Probab=99.97 E-value=9.8e-32 Score=271.77 Aligned_cols=170 Identities=34% Similarity=0.549 Sum_probs=154.3
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHcCCEEEEEecchhhhcccceEecChhccccccccCCceeecccCCCC---Cc
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYRGDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGAMLGTKRTLPE---KK 399 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGsiLgt~R~~p~---~~ 399 (512)
|||+|+++||||||||++++++++++..+|++|||+++||.||+++++.+|+|+++.+|.++||++|||+|+.+. +.
T Consensus 1 KrI~Il~sGG~apG~Na~i~~~v~~a~~~g~~v~g~~~G~~GL~~~~~~~l~~~~v~~~~~~gGt~lgtsR~~~~~~~~~ 80 (282)
T PF00365_consen 1 KRIAILTSGGDAPGMNAAIRGVVRYAIRRGWEVYGIRNGFEGLLNGDIIELTWEDVRGIINQGGTILGTSRFKPFKDPEG 80 (282)
T ss_dssp EEEEEEEESS--TTHHHHHHHHHHHHHHTTSEEEEETTHHHHHHHCTEEEECGGGGTTGGGSSSSTTTBBBSSGGGSHHH
T ss_pred CeEEEEecCCCchhhhHHHHHHHHHHHhcCCEEEEEEccCccceeeeEEeecccCccccccCCCcEeCcccCccccchhh
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999763 24
Q ss_pred HHHHHHHHHHcCCceEEEecCccchhhhh--h------hcCCCccccCc-------hhHHHHHHHHHHHHHHHhhhcCCC
Q psy5984 400 LPQIAAKLKELKIQALLIIGGFEDEQGHM--Q------QGGSPSPFDRN-------MGTKQAANTVEWMIDQLKKCTKPD 464 (512)
Q Consensus 400 ~~~i~~~l~~~~i~~LvviGGf~s~lGh~--Q------qGG~PstiDr~-------lG~~tA~~ai~~l~~~l~~~a~s~ 464 (512)
.++++++|++++||+|++|||+||+.+.. + -.|+|+||||| +||+||++.+..++++++.++.|+
T Consensus 81 ~~~~~~~l~~~~Id~Li~IGG~gs~~~a~~L~~~~~i~vigiPkTIDNDi~gtd~siGf~TA~~~~~~~i~~i~~~a~s~ 160 (282)
T PF00365_consen 81 RKKIVENLKKLGIDALIVIGGDGSMKGAHKLSEEFGIPVIGIPKTIDNDIPGTDYSIGFDTAVNYIAEAIDNIKTTARSH 160 (282)
T ss_dssp HHHHHHHHHHTTESEEEEEESHHHHHHHHHHHHHHHSEEEEEEEETTSSCTTSSS-BTHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhhHHHHHHHhCCCEEEEecCCCHHHHHHHHHhcCceEEEEEeccccCCcCCCCCCcccCchhHHHHHHHHHHHHhhccc
Confidence 67899999999999999999999987753 2 25999999996 799999999999999999999899
Q ss_pred Cceee------cCCCcEEEEEee-cCceeEeeccc
Q psy5984 465 GSVFT------DSPETAVLMGVI-RRQYCFTPLQT 492 (512)
Q Consensus 465 ~rv~~------~~~~~a~vigl~-g~~~~~~Pl~~ 492 (512)
+|+|+ ++||+|...++. +.+++++|...
T Consensus 161 ~rv~ivEvmGr~~G~LAl~~ala~~a~~ilipE~~ 195 (282)
T PF00365_consen 161 NRVFIVEVMGRNAGWLALAAALATGADLILIPEEP 195 (282)
T ss_dssp TEEEEEEESSTTSTHHHHHHHHHHTSSEEEBTTSH
T ss_pred CCceEEEeCCCCcCHHHHHHHhccCCCEEEEeccc
Confidence 99998 799999999996 78999999654
No 21
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=99.97 E-value=6.6e-31 Score=272.01 Aligned_cols=278 Identities=23% Similarity=0.359 Sum_probs=185.7
Q ss_pred ceEEEEeeCCCCCCchHHHHHHHHhcCCcc---c-eeccccccCCcc--cceeeeecccccccCcccccCcchh--HHHH
Q psy5984 195 YTLAVMHIGAPACGMNAAVRSFCNDNYNTD---F-IYRLYSEEGKGL--FSARQNVLGHMQQGGSPSPFDRNMG--TKQA 266 (512)
Q Consensus 195 ~~iai~~~G~~a~GMNaa~ra~~~~~~~~~---~-i~~~~~~~~~g~--~~~~~~V~G~~~rGGs~~~~~R~~~--~~~~ 266 (512)
+||||+++||||||||+++|++++.....+ + +++||.|+..+. ..+|.+|.+|.+.|||.++|.|..+ +...
T Consensus 1 ~ri~Il~sGG~apG~N~~i~~~v~~~~~~g~~v~G~~~G~~GL~~~~~~~l~~~~v~~~~~~gGs~LgtsR~~~~~~~~~ 80 (338)
T cd00363 1 KKIGVLTSGGDAPGMNAAIRGVVRSAIAEGLEVYGIYEGYAGLVEGDIKELDWESVSDIINRGGTIIGSARCKEFRTEEG 80 (338)
T ss_pred CeEEEEccCCCchhHHHHHHHHHHHHHHCCCEEEEEecChHHhCCCCeEeCCHHHhcchhhCCCeecccCCCCccCCHHH
Confidence 589999999999999999999998866554 2 677776544332 2367889999999999999999665 2221
Q ss_pred H--------------------HHHHHHhHHHHHH-hHhhhhcCCcccccccccccCCCCceeeccccCcccccccc----
Q psy5984 267 A--------------------NTAYQAGIQLVEA-RSDYKEFCIPMVVIPSTISNNVPGTEFSLGCDTALNEITEE---- 321 (512)
Q Consensus 267 ~--------------------~~~~~a~~~L~~a-~~~y~~~~ipmv~iPatIsNnvpgte~slG~DTaln~~~~~---- 321 (512)
. ...+.++..|.+. +++++ .||+++||+|||||+|+||+|+|+|||+|.++++
T Consensus 81 ~~~~~~~l~~~~I~~Lv~IGGd~s~~~a~~L~e~~~~~~~--~i~vigiPkTIDNDl~~td~s~Gf~TA~~~~~~~i~~l 158 (338)
T cd00363 81 RAKAAENLKKHGIDALVVIGGDGSYTGADLLTEEWPSKYQ--GFNVIGLPGTIDNDIKGTDYTIGFDTALKTIVEAIDRI 158 (338)
T ss_pred HHHHHHHHHHhCCCEEEEeCCHHHHHHHHHHHHHHHhcCC--CccEEEeeecccCCCcCcccCcCHHHHHHHHHHHHHHH
Confidence 1 2344455556554 44443 6999999999999999999999999999987765
Q ss_pred ------cceEEEEecCCCcchhhHHHHHHHHHHHHcCCEE-EEEecchhhhcccceEecChhcccc-cc--ccCCceeec
Q psy5984 322 ------GYTLAVMHIGAPACGMNAAVRSFVRNCIYRGDTV-IGIHDGVEGLVAGNVQIMQWSDVTG-WV--GQGGAMLGT 391 (512)
Q Consensus 322 ------~~~iaIi~sGg~apG~NAair~~v~~~~~~G~~v-~g~~~G~~GL~~g~~~~l~~~~v~~-~~--~~GGsiLgt 391 (512)
..++.|++.-|-.+|.-|+..++.. +..+ +-.+.-+. ..+...+ -+.+.. .. ..-+.++-+
T Consensus 159 ~~~a~s~~rv~ivEvMGR~~G~Lal~~ala~-----~ad~iliPE~~~~---~~~~~~~-~~~i~~r~~~~~~~~vivvs 229 (338)
T cd00363 159 RDTASSHQRTFVVEVMGRHCGDIALEAGLAT-----GADIIFIPEEPAA---DEWEEEM-VDVIKKRRERGKRHGIVIVA 229 (338)
T ss_pred HHhcccCCCEEEEEECCcCHHHHHHHHHHHh-----CCCEEEeCCCCCC---CCCHHHH-HHHHHHHHHhcCCeEEEEEe
Confidence 2578888888877777776544432 2222 22222111 0000000 000100 00 111233433
Q ss_pred ccCC---C-CCcHHHHHHHHHHcCCceEEEecCcc---chhhhhhhcCCCccccCchhHHHHHHHHHHHHHHHhhhcCCC
Q psy5984 392 KRTL---P-EKKLPQIAAKLKELKIQALLIIGGFE---DEQGHMQQGGSPSPFDRNMGTKQAANTVEWMIDQLKKCTKPD 464 (512)
Q Consensus 392 ~R~~---p-~~~~~~i~~~l~~~~i~~LvviGGf~---s~lGh~QqGG~PstiDr~lG~~tA~~ai~~l~~~l~~~a~s~ 464 (512)
+-.. + ....+.+++.+++.- |++ ..+||+||||.|+++||.+|++++..|++.+.+.
T Consensus 230 EG~~~~~~~~~~~~~l~~~i~~~~--------~~~~r~~~lGy~qRg~~ps~~D~~~a~~lG~~Av~~~~~g-------- 293 (338)
T cd00363 230 EGAIDFIPKPITEKLLAKLVEERL--------GFDTRATVLGHVQRGGTPTAFDRILASRLGAEAVELLLEG-------- 293 (338)
T ss_pred CCCccccccCchHHHHHHHHHHHc--------CCceEEeecCccccCCCCChhhHHHHHHHHHHHHHHHHcC--------
Confidence 3221 1 112345666666541 333 3599999999999999999999999999988763
Q ss_pred CceeecCCCcEEEEEeecC---ceeEeeccchhhhcCcccCC---CcccCCC
Q psy5984 465 GSVFTDSPETAVLMGVIRR---QYCFTPLQTLKKETNFECKS---CNGQTSQ 510 (512)
Q Consensus 465 ~rv~~~~~~~a~vigl~g~---~~~~~Pl~~l~~~~d~~~r~---~~~~ww~ 510 (512)
.+..++++.+. ++.++|++++.+ .++|. ++..||+
T Consensus 294 --------~tg~mv~~~~~~~~~~~~vpl~~~~~---~~~~~~~~~~~~~~~ 334 (338)
T cd00363 294 --------TGGTPVGIQNLNENQVVRHPLTEAVN---MTKRVGVDLEGRPFK 334 (338)
T ss_pred --------CCCcEEEEECCccCEEEEecHHHHHh---hhcccccCCChHHHH
Confidence 45678888887 999999887754 34443 7788885
No 22
>PLN02884 6-phosphofructokinase
Probab=99.97 E-value=7.6e-31 Score=276.19 Aligned_cols=167 Identities=20% Similarity=0.279 Sum_probs=152.2
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHcCC-EEEEEecchhhhcccc--eEecChhccccccccCCceeecccCCCCCc
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYRGD-TVIGIHDGVEGLVAGN--VQIMQWSDVTGWVGQGGAMLGTKRTLPEKK 399 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~G~-~v~g~~~G~~GL~~g~--~~~l~~~~v~~~~~~GGsiLgt~R~~p~~~ 399 (512)
+||||+++||+|||||++||++++.+..+|+ +|||+++||.||++++ ...|++++|.+|.++||++|||+|+.+ .
T Consensus 54 ~rIaIltsGGdaPGmNa~Iravv~~a~~~g~~~V~Gi~~G~~GL~~~~~~~~~l~~~~v~~i~~~GGt~LGtsR~~~--~ 131 (411)
T PLN02884 54 VKAAIVTCGGLCPGLNDVIRQIVFTLEIYGVKNIVGIPFGYRGFFEKGLSEMPLSRKVVQNIHLSGGSLLGVSRGGA--K 131 (411)
T ss_pred eEEEEEcCCCCCccHhHHHHHHHHHHHHcCCcEEEEEccCHHHHhCCCceeeecCHHHHHHHHhCCCceeccCCCCc--c
Confidence 7999999999999999999999999998998 8999999999999998 456789999999999999999999986 5
Q ss_pred HHHHHHHHHHcCCceEEEecCccchhhhhh-------h------cCCCccccCc-------hhHHHHHHHHHHHHHHHhh
Q psy5984 400 LPQIAAKLKELKIQALLIIGGFEDEQGHMQ-------Q------GGSPSPFDRN-------MGTKQAANTVEWMIDQLKK 459 (512)
Q Consensus 400 ~~~i~~~l~~~~i~~LvviGGf~s~lGh~Q-------q------GG~PstiDr~-------lG~~tA~~ai~~l~~~l~~ 459 (512)
+++++++|++++|++|++||||||+.++.+ + .|+|+||||| +||+||++.+...+++++.
T Consensus 132 ~~~i~~~L~~~~Id~LivIGGdgS~~~a~~L~~~~~~~g~~i~vIGIPkTIDNDi~~tD~TiGFdTAv~~~~~ai~~l~~ 211 (411)
T PLN02884 132 TSDIVDSIEARGINMLFVLGGNGTHAGANAIHNECRKRKMKVSVVGVPKTIDNDILLMDKTFGFDTAVEEAQRAINSAYI 211 (411)
T ss_pred HHHHHHHHHHcCCCEEEEECCchHHHHHHHHHHHHHHcCCCceEEeccccccCCCcCcccCCCHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999877531 2 3899999995 7999999999999999999
Q ss_pred hcCC-CCceee------cCCCcEEEEEeec--CceeEeecc
Q psy5984 460 CTKP-DGSVFT------DSPETAVLMGVIR--RQYCFTPLQ 491 (512)
Q Consensus 460 ~a~s-~~rv~~------~~~~~a~vigl~g--~~~~~~Pl~ 491 (512)
++.| +.|+|+ ++||+|...++.+ .+++++|..
T Consensus 212 tA~s~~~rv~iVEvMGR~aG~LAl~aalA~g~ad~ilIPE~ 252 (411)
T PLN02884 212 EAHSAYHGIGLVKLMGRSSGFIAMHASLASGQVDICLIPEV 252 (411)
T ss_pred hhhccCCcEEEEEeCCCCHHHHHHHHHHhcCCCCEEEeCCC
Confidence 9866 678888 7899999999974 699999965
No 23
>PRK14071 6-phosphofructokinase; Provisional
Probab=99.97 E-value=1.4e-30 Score=271.30 Aligned_cols=170 Identities=26% Similarity=0.378 Sum_probs=153.8
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHc-CCEEEEEecchhhhccc--ceEecChhccccccccCCceeecccC-CC--
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYR-GDTVIGIHDGVEGLVAG--NVQIMQWSDVTGWVGQGGAMLGTKRT-LP-- 396 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~-G~~v~g~~~G~~GL~~g--~~~~l~~~~v~~~~~~GGsiLgt~R~-~p-- 396 (512)
+||+|+++||||||||+++|++++.++.+ |++|||+++||.||+++ ++.+|+|+++.+|.++||++|||+|. .|
T Consensus 5 ~~I~IltsGG~apGmNa~i~~vv~~a~~~~g~~v~G~~~G~~GL~~~~~~~~~l~~~~v~~~~~~GGt~LgtsR~~~~~~ 84 (360)
T PRK14071 5 KRIGILTSGGDCAGLNAVIRAVVHRARGTYGWEVIGIRDATQGLMARPPQYIELDLDQVDDLLRMGGTILGTTNKGDPFA 84 (360)
T ss_pred CEEEEECCCCCchhHHHHHHHHHHHHHhcCCCEEEEEecChHHHhcCCCCeEECCHHHHhhHHhCCCceeccCCCCCccc
Confidence 79999999999999999999999999985 99999999999999999 89999999999999999999999973 22
Q ss_pred --------CCcHHHHHHHHHHcCCceEEEecCccchhhhh---hh-----cCCCccccCc-------hhHHHHHHHHHHH
Q psy5984 397 --------EKKLPQIAAKLKELKIQALLIIGGFEDEQGHM---QQ-----GGSPSPFDRN-------MGTKQAANTVEWM 453 (512)
Q Consensus 397 --------~~~~~~i~~~l~~~~i~~LvviGGf~s~lGh~---Qq-----GG~PstiDr~-------lG~~tA~~ai~~l 453 (512)
++.+++++++|++++||+|++||||||+.+.. |. .|+|+||||| +||+||++.+...
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~~~Id~Li~IGGdgS~~~a~~L~~~~~i~vIgiPkTIDNDl~~td~t~Gf~TA~~~~~~~ 164 (360)
T PRK14071 85 FPMPDGSLRDRSQEIIDGYHSLGLDALIGIGGDGSLAILRRLAQQGGINLVGIPKTIDNDVGATEVSIGFDTAVNIATEA 164 (360)
T ss_pred cccccccchHHHHHHHHHHHHcCCCEEEEECChhHHHHHHHHHHhcCCcEEEecccccCCCcCcccCcChhHHHHHHHHH
Confidence 12468999999999999999999999986653 22 4899999995 7999999999999
Q ss_pred HHHHhhhcCCCCceee------cCCCcEEEEEee-cCceeEeeccc
Q psy5984 454 IDQLKKCTKPDGSVFT------DSPETAVLMGVI-RRQYCFTPLQT 492 (512)
Q Consensus 454 ~~~l~~~a~s~~rv~~------~~~~~a~vigl~-g~~~~~~Pl~~ 492 (512)
+++++.++.||+|+|+ ++||+|...++. +.+++++|...
T Consensus 165 id~i~~ta~s~~rv~ivEvMGR~~G~LAl~~~la~ga~~iliPE~~ 210 (360)
T PRK14071 165 LDRLHFTAASHNRVMILEVMGRDAGHIALAAGIAGGADVILIPEIP 210 (360)
T ss_pred HHHHHhhhcccCCEEEEEECCCCccHHHHHhHhhcCCCEEEECCCC
Confidence 9999999999999998 799999999996 78999999653
No 24
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=99.97 E-value=8.5e-31 Score=271.18 Aligned_cols=171 Identities=30% Similarity=0.498 Sum_probs=157.0
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHcCCEEEEEecchhhhcccceEecChhccccccccCCceeecccCCC---CCc
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYRGDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGAMLGTKRTLP---EKK 399 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGsiLgt~R~~p---~~~ 399 (512)
+||+|+++||||||||+++|++++.+..+|++|||+++||.||+++++.+|+|+++.+|.++||++|||+|+.+ ++.
T Consensus 1 ~ri~Il~sGG~apG~N~~i~~~v~~~~~~g~~v~G~~~G~~GL~~~~~~~l~~~~v~~~~~~gGs~LgtsR~~~~~~~~~ 80 (338)
T cd00363 1 KKIGVLTSGGDAPGMNAAIRGVVRSAIAEGLEVYGIYEGYAGLVEGDIKELDWESVSDIINRGGTIIGSARCKEFRTEEG 80 (338)
T ss_pred CeEEEEccCCCchhHHHHHHHHHHHHHHCCCEEEEEecChHHhCCCCeEeCCHHHhcchhhCCCeecccCCCCccCCHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999886 235
Q ss_pred HHHHHHHHHHcCCceEEEecCccchhhhhh-------------hcCCCccccCc-------hhHHHHHHHHHHHHHHHhh
Q psy5984 400 LPQIAAKLKELKIQALLIIGGFEDEQGHMQ-------------QGGSPSPFDRN-------MGTKQAANTVEWMIDQLKK 459 (512)
Q Consensus 400 ~~~i~~~l~~~~i~~LvviGGf~s~lGh~Q-------------qGG~PstiDr~-------lG~~tA~~ai~~l~~~l~~ 459 (512)
+++++++|++++||+|++|||++|+.+..+ ..|+|+||||| +||+||++.+..++++++.
T Consensus 81 ~~~~~~~l~~~~I~~Lv~IGGd~s~~~a~~L~e~~~~~~~~i~vigiPkTIDNDl~~td~s~Gf~TA~~~~~~~i~~l~~ 160 (338)
T cd00363 81 RAKAAENLKKHGIDALVVIGGDGSYTGADLLTEEWPSKYQGFNVIGLPGTIDNDIKGTDYTIGFDTALKTIVEAIDRIRD 160 (338)
T ss_pred HHHHHHHHHHhCCCEEEEeCCHHHHHHHHHHHHHHHhcCCCccEEEeeecccCCCcCcccCcCHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999877531 23899999995 7999999999999999999
Q ss_pred hcCCCCceee------cCCCcEEEEEee-cCceeEeeccch
Q psy5984 460 CTKPDGSVFT------DSPETAVLMGVI-RRQYCFTPLQTL 493 (512)
Q Consensus 460 ~a~s~~rv~~------~~~~~a~vigl~-g~~~~~~Pl~~l 493 (512)
++.||+|+|+ ++||+|+..++. +.+++++|....
T Consensus 161 ~a~s~~rv~ivEvMGR~~G~Lal~~ala~~ad~iliPE~~~ 201 (338)
T cd00363 161 TASSHQRTFVVEVMGRHCGDIALEAGLATGADIIFIPEEPA 201 (338)
T ss_pred hcccCCCEEEEEECCcCHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 9999999998 789999999996 689999997644
No 25
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2e-30 Score=266.57 Aligned_cols=253 Identities=29% Similarity=0.422 Sum_probs=171.8
Q ss_pred cceEEEEeeCCCCCCchHHHHHHHHhcCCcc---c-eeccccccCCcc--cceeeeecccccccCcccccCcchhHHH--
Q psy5984 194 GYTLAVMHIGAPACGMNAAVRSFCNDNYNTD---F-IYRLYSEEGKGL--FSARQNVLGHMQQGGSPSPFDRNMGTKQ-- 265 (512)
Q Consensus 194 ~~~iai~~~G~~a~GMNaa~ra~~~~~~~~~---~-i~~~~~~~~~g~--~~~~~~V~G~~~rGGs~~~~~R~~~~~~-- 265 (512)
.+|||||++||||||||+|+|++||.....+ + +++||.|+-.+. ..+|.+|..|.++|||.+++.|......
T Consensus 2 ~kkIaIlTSGGdaPGmNa~Iravvr~a~~~g~eV~Gi~~Gy~GL~~~~i~~l~~~~v~~~~~~GGT~lgssR~~~~~~~e 81 (347)
T COG0205 2 MKKIAILTSGGDAPGMNAVIRAVVRTAIKEGLEVFGIYNGYLGLLEGDIKPLTREDVDDLINRGGTFLGSARFPEFKTEE 81 (347)
T ss_pred CceEEEEccCCCCccHHHHHHHHHHHHHHcCCEEEEEecchhhhcCCcceeccccchhHHHhcCCeEEeeCCCCCcccHH
Confidence 4799999999999999999999999877777 2 788887665443 3478899999999999999998764332
Q ss_pred HHHHHHHHh----H----------HHHHHhHhhhhcCCcccccccccccCCCCceeeccccCcccccccccceEEEEecC
Q psy5984 266 AANTAYQAG----I----------QLVEARSDYKEFCIPMVVIPSTISNNVPGTEFSLGCDTALNEITEEGYTLAVMHIG 331 (512)
Q Consensus 266 ~~~~~~~a~----~----------~L~~a~~~y~~~~ipmv~iPatIsNnvpgte~slG~DTaln~~~~~~~~iaIi~sG 331 (512)
+...+.+.+ + -++.|....+++.+|+|+||.|||||+++||+|+|+|||+|+.+++..++
T Consensus 82 ~~~~~~~~l~~~gId~LvvIGGDgS~~gA~~Lae~~~i~vVGvPkTIDNDi~~td~tiGfdTA~~~~~eaid~l------ 155 (347)
T COG0205 82 GRKVAAENLKKLGIDALVVIGGDGSYTGAALLAEEGGIPVVGVPKTIDNDISGTDFTIGFDTALETAVEAIDNL------ 155 (347)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCChHHHHHHHHHhcCCcEEecCCCccCCCcccccCccHHHHHHHHHHHHHHH------
Confidence 222222221 1 15566666777779999999999999999999999999999998874222
Q ss_pred CCcchhhHHHHHHHHHHHH-cC---CEEEEEecchh----hhcccceEecChhccccccccCCceeecccCCCCCcHHHH
Q psy5984 332 APACGMNAAVRSFVRNCIY-RG---DTVIGIHDGVE----GLVAGNVQIMQWSDVTGWVGQGGAMLGTKRTLPEKKLPQI 403 (512)
Q Consensus 332 g~apG~NAair~~v~~~~~-~G---~~v~g~~~G~~----GL~~g~~~~l~~~~v~~~~~~GGsiLgt~R~~p~~~~~~i 403 (512)
+ ..+.. .. .+|+|.++|+. ||+.+....+.++....+ .-++....+
T Consensus 156 ----------~---dtassh~r~~iveVMGR~aG~lAl~aglA~~a~~ilipE~~~~~-------------~i~~~~~~i 209 (347)
T COG0205 156 ----------R---DTASSHERIFIVEVMGRHAGWLALAAGLATGADIILIPEEPADL-------------IIEELIAEI 209 (347)
T ss_pred ----------H---HHHhCcCCEEEEEecCcChhHHHHHHHHhcCCCEEEecCccccc-------------hHHHHHHHH
Confidence 1 11111 11 37888888875 444443322211111100 000001111
Q ss_pred HHHHH-HcCCceEEEe--c----------------------C-cc---chhhhhhhcCCCccccCchhHHHHHHHHHHHH
Q psy5984 404 AAKLK-ELKIQALLII--G----------------------G-FE---DEQGHMQQGGSPSPFDRNMGTKQAANTVEWMI 454 (512)
Q Consensus 404 ~~~l~-~~~i~~Lvvi--G----------------------G-f~---s~lGh~QqGG~PstiDr~lG~~tA~~ai~~l~ 454 (512)
....+ +.+.+.++++ | + ++ +.+||+|+||.|++|||.++++++++|+..+.
T Consensus 210 ~~~~~~~gk~~~iIvvaEG~~~~~~~~~~~~~~~i~~~~~~~~~~~r~t~LGhiqRgg~p~~fDr~~a~~lG~~AV~~l~ 289 (347)
T COG0205 210 KAKREARGKKHAIIVVAEGAIDQIGENGAELLAAIEELLALGDFETRVTVLGHIQRGGTPSAFDRVLASRLGAAAVDLLL 289 (347)
T ss_pred HHHHHHhCCCceEEEEccccccccccchhhHHHHHHHHhhhcccceEEEeccccccCCCCchHHHHHHHHHHHHHHHHHH
Confidence 11111 1112222222 0 0 23 25999999999999999999999999999987
Q ss_pred HHHhhhcCCCCceeecCCCcEEEEEeecCceeEeeccchh
Q psy5984 455 DQLKKCTKPDGSVFTDSPETAVLMGVIRRQYCFTPLQTLK 494 (512)
Q Consensus 455 ~~l~~~a~s~~rv~~~~~~~a~vigl~g~~~~~~Pl~~l~ 494 (512)
+. ....++++.+.++++.|+.+-.
T Consensus 290 ~g----------------~~~~~v~i~~~~~v~~~~~~~~ 313 (347)
T COG0205 290 EG----------------KTGYMVGIRNNKIVHVPIDEAV 313 (347)
T ss_pred cC----------------CCCceEEEeCCeeEeehhHhhh
Confidence 73 3467899999999999987543
No 26
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes []. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6- bisphosphate, a key regulatory step in the glycolytic pathway [, ]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains []). PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (alpha/beta) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6- bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react []. Deficiency in PFK leads to glycogenosis type VII (Tauri's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise []. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [].; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005945 6-phosphofructokinase complex; PDB: 3O8O_E 3OPY_H 1PFK_A 2PFK_D 1MTO_F 3U39_C 6PFK_A 4PFK_A 3PFK_A 3HNO_B ....
Probab=99.97 E-value=4.4e-31 Score=267.01 Aligned_cols=240 Identities=27% Similarity=0.389 Sum_probs=151.5
Q ss_pred ceEEEEeeCCCCCCchHHHHHHHHhcCCccc----eeccccccCCccc--ceeeeecccccccCcccccCcchhHH--HH
Q psy5984 195 YTLAVMHIGAPACGMNAAVRSFCNDNYNTDF----IYRLYSEEGKGLF--SARQNVLGHMQQGGSPSPFDRNMGTK--QA 266 (512)
Q Consensus 195 ~~iai~~~G~~a~GMNaa~ra~~~~~~~~~~----i~~~~~~~~~g~~--~~~~~V~G~~~rGGs~~~~~R~~~~~--~~ 266 (512)
|||||+|+||||||||+++|++++.....++ +++||.+..++.+ .+|.+|.+|.+.|||.+++.|..+.. ..
T Consensus 1 KrI~Il~sGG~apG~Na~i~~~v~~a~~~g~~v~g~~~G~~GL~~~~~~~l~~~~v~~~~~~gGt~lgtsR~~~~~~~~~ 80 (282)
T PF00365_consen 1 KRIAILTSGGDAPGMNAAIRGVVRYAIRRGWEVYGIRNGFEGLLNGDIIELTWEDVRGIINQGGTILGTSRFKPFKDPEG 80 (282)
T ss_dssp EEEEEEEESS--TTHHHHHHHHHHHHHHTTSEEEEETTHHHHHHHCTEEEECGGGGTTGGGSSSSTTTBBBSSGGGSHHH
T ss_pred CeEEEEecCCCchhhhHHHHHHHHHHHhcCCEEEEEEccCccceeeeEEeecccCccccccCCCcEeCcccCccccchhh
Confidence 6999999999999999999999987666553 6677754433322 36889999999999999999975432 11
Q ss_pred HHHHHHHh--------------HHHHHHhHhhhhcCCcccccccccccCCCCceeeccccCccccccccc----------
Q psy5984 267 ANTAYQAG--------------IQLVEARSDYKEFCIPMVVIPSTISNNVPGTEFSLGCDTALNEITEEG---------- 322 (512)
Q Consensus 267 ~~~~~~a~--------------~~L~~a~~~y~~~~ipmv~iPatIsNnvpgte~slG~DTaln~~~~~~---------- 322 (512)
...+++.+ --+..+.....++.+|+++||+|||||+||||||+|+|||+|.++++.
T Consensus 81 ~~~~~~~l~~~~Id~Li~IGG~gs~~~a~~L~~~~~i~vigiPkTIDNDi~gtd~siGf~TA~~~~~~~i~~i~~~a~s~ 160 (282)
T PF00365_consen 81 RKKIVENLKKLGIDALIVIGGDGSMKGAHKLSEEFGIPVIGIPKTIDNDIPGTDYSIGFDTAVNYIAEAIDNIKTTARSH 160 (282)
T ss_dssp HHHHHHHHHHTTESEEEEEESHHHHHHHHHHHHHHHSEEEEEEEETTSSCTTSSS-BTHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhhHHHHHHHhCCCEEEEecCCCHHHHHHHHHhcCceEEEEEeccccCCcCCCCCCcccCchhHHHHHHHHHHHHhhccc
Confidence 11111111 013333333334569999999999999999999999999999977652
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHcCCEEEEE-ecch--hhhcccceEecChhcccccccc---CCceeecccCCC
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYRGDTVIGI-HDGV--EGLVAGNVQIMQWSDVTGWVGQ---GGAMLGTKRTLP 396 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~G~~v~g~-~~G~--~GL~~g~~~~l~~~~v~~~~~~---GGsiLgt~R~~p 396 (512)
.++.|++.-|-.||.-|+..++.. +..+.-+ +..+ ..++ +.+.....+ .+.++-++....
T Consensus 161 ~rv~ivEvmGr~~G~LAl~~ala~-----~a~~ilipE~~~~~~~~~---------~~i~~~~~~~k~~~iVvvsEG~~~ 226 (282)
T PF00365_consen 161 NRVFIVEVMGRNAGWLALAAALAT-----GADLILIPEEPFDLDELL---------DDIKKRYERGKRYGIVVVSEGAKD 226 (282)
T ss_dssp TEEEEEEESSTTSTHHHHHHHHHH-----TSSEEEBTTSHHHHHHHH---------HHHHHHHHTTSSEEEEEEETTSBS
T ss_pred CCceEEEeCCCCcCHHHHHHHhcc-----CCCEEEEeccccchHHHH---------HHhhhhhcccCceEEEEecccccc
Confidence 577788887777777776555432 1111111 1000 0000 011111111 134555555443
Q ss_pred CCc-HHHHHHHHHHcCCceEEEecCccc---hhhhhhhcCCCccccCchhHHHHHHHHHHHHH
Q psy5984 397 EKK-LPQIAAKLKELKIQALLIIGGFED---EQGHMQQGGSPSPFDRNMGTKQAANTVEWMID 455 (512)
Q Consensus 397 ~~~-~~~i~~~l~~~~i~~LvviGGf~s---~lGh~QqGG~PstiDr~lG~~tA~~ai~~l~~ 455 (512)
... ..+..+.+.+.+. |+++ .+||+||||.|+++||.+|++++.+|++.+++
T Consensus 227 ~~~i~~~~~~~~~~~~~-------~~~~r~~~lGh~Qrgg~P~~~DR~la~~~g~~Av~~i~e 282 (282)
T PF00365_consen 227 GQPISSEFIKELLEEGL-------GFDVRVTILGHLQRGGTPSAFDRILATRFGIKAVEAILE 282 (282)
T ss_dssp SHBHHHHHHHHHHHHTT-------TSEEEEEE-GGGGGTSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccccc-------ccceeecccchhhcCCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 111 2233333333321 3442 59999999999999999999999999998864
No 27
>PRK14072 6-phosphofructokinase; Provisional
Probab=99.96 E-value=2.5e-30 Score=273.86 Aligned_cols=168 Identities=15% Similarity=0.198 Sum_probs=150.8
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHcC--CEEEEEecchhhhcccceEecChhcccc---ccccCCceeecccCCC-
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYRG--DTVIGIHDGVEGLVAGNVQIMQWSDVTG---WVGQGGAMLGTKRTLP- 396 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~G--~~v~g~~~G~~GL~~g~~~~l~~~~v~~---~~~~GGsiLgt~R~~p- 396 (512)
+||+|+|||||||||||++|++++.++.+| ++|||+++||.||+++++.+|+..++.+ +.++||++|||+|+.+
T Consensus 4 k~i~IltsGGdapGmNaaIr~vv~~a~~~g~~~~V~G~~~G~~GLl~~~~~~l~~~~~~~i~~i~~~gGt~LgssR~~~~ 83 (416)
T PRK14072 4 GNALYAQSGGPTAVINASAAGVIEEARKHKKIGKVYGARNGIIGILDEDLIDLSKESDEALAALAHTPSGALGSCRYKLK 83 (416)
T ss_pred ceEEEEccCCchHHHHHHHHHHHHHHHHhCCceEEEEEecChHHhcCCCeeeCChhhHhHHHHHhcCCCeEeccCCCCCc
Confidence 799999999999999999999999999999 9999999999999999999998766666 8999999999999875
Q ss_pred -----CCcHHHHHHHHHHcCCceEEEecCccchhhhh---h----h------cCCCccccCc-------hhHHHHHHHHH
Q psy5984 397 -----EKKLPQIAAKLKELKIQALLIIGGFEDEQGHM---Q----Q------GGSPSPFDRN-------MGTKQAANTVE 451 (512)
Q Consensus 397 -----~~~~~~i~~~l~~~~i~~LvviGGf~s~lGh~---Q----q------GG~PstiDr~-------lG~~tA~~ai~ 451 (512)
++..+++.++|++++|++|++|||+||+.++. + . .|+|+||||| +||+||++.+.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~Id~LivIGGdgS~~~a~~L~e~~~~~g~~i~vIgIPkTIDNDl~gtD~t~GF~TA~~~i~ 163 (416)
T PRK14072 84 SLEEDRAEYERLLEVFKAHDIGYFFYNGGNDSMDTALKVSQLAKKMGYPIRCIGIPKTIDNDLPGTDHCPGFGSAAKYIA 163 (416)
T ss_pred ccccChHHHHHHHHHHHHcCCCEEEEECChHHHHHHHHHHHHHHHhCCCceEEEeeecccCCCCCCCCCCChHHHHHHHH
Confidence 23589999999999999999999999986652 1 2 3899999996 69999999999
Q ss_pred HHHHHH----hhhcCCCCceee------cCCCcEEEEEee------cCceeEeecc
Q psy5984 452 WMIDQL----KKCTKPDGSVFT------DSPETAVLMGVI------RRQYCFTPLQ 491 (512)
Q Consensus 452 ~l~~~l----~~~a~s~~rv~~------~~~~~a~vigl~------g~~~~~~Pl~ 491 (512)
..++++ +.++.+| |+|+ ++||+|...|+. +.+++++|..
T Consensus 164 ~ai~~l~~D~~~ta~s~-Rv~iVEvMGR~aG~LAl~a~lA~~~~~~gad~iliPE~ 218 (416)
T PRK14072 164 TSVLEAALDVAAMANTS-KVFILEVMGRHAGWLAAAAALAKQNPDDAPHLIYLPER 218 (416)
T ss_pred HHHHHHHHHHHhcccCc-eEEEEEEeCcchhHHHHHHhhccccCCCCccEEEccCC
Confidence 999998 7777778 9998 799999999998 5799999954
No 28
>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=99.96 E-value=5.4e-30 Score=271.52 Aligned_cols=269 Identities=16% Similarity=0.158 Sum_probs=175.9
Q ss_pred CcceEEEEeeCCCCCCchHHHHHHHHhcCCc-c----c-eeccccccCC---c--ccceeeeecccccccCcccccCcch
Q psy5984 193 EGYTLAVMHIGAPACGMNAAVRSFCNDNYNT-D----F-IYRLYSEEGK---G--LFSARQNVLGHMQQGGSPSPFDRNM 261 (512)
Q Consensus 193 ~~~~iai~~~G~~a~GMNaa~ra~~~~~~~~-~----~-i~~~~~~~~~---g--~~~~~~~V~G~~~rGGs~~~~~R~~ 261 (512)
+.+||||+|+||||||||+++|++|+...+. + + +++||.|..+ + +..+|.+|.+|.++|||.++|.|..
T Consensus 79 ~~~riaIvtsGG~~PGmN~vIr~iv~~a~~~~gv~~V~Gi~~Gy~GL~~~~~~~~~~Lt~~~v~~i~~~GGTiLGTsR~~ 158 (443)
T PRK06830 79 SKVKAAIVTCGGLCPGLNDVIRAIVLELHHHYGVRRILGIRYGYQGLIPRYGHDPVELTPEVVADIHEFGGTILGSSRGP 158 (443)
T ss_pred cccEEEEECCCCCchHHHHHHHHHHHHHHHhCCCeEEEEEccCHHHHhhccCCCEEECCHHHHhhHHhCCCccccCCCCc
Confidence 3699999999999999999999999887654 2 2 6677765432 2 2247889999999999999999965
Q ss_pred hHHHH-----------------HHHHHHHhHHHHHHhHhhhhcCCcccccccccccCCCCceeeccccCccccccccc--
Q psy5984 262 GTKQA-----------------ANTAYQAGIQLVEARSDYKEFCIPMVVIPSTISNNVPGTEFSLGCDTALNEITEEG-- 322 (512)
Q Consensus 262 ~~~~~-----------------~~~~~~a~~~L~~a~~~y~~~~ipmv~iPatIsNnvpgte~slG~DTaln~~~~~~-- 322 (512)
..... ++..+.++..|.+..+++ .++||+|+||+|||||+|+||+|+|+|||+|.++++.
T Consensus 159 ~~~~~iv~~L~~~~I~~L~vIGGdgT~~gA~~l~ee~~~~-g~~I~VIGIPKTIDNDi~~td~S~GFdTAv~~a~~aI~~ 237 (443)
T PRK06830 159 QDPEEIVDTLERMNINILFVIGGDGTLRGASAIAEEIERR-GLKISVIGIPKTIDNDINFIQKSFGFETAVEKATEAIRC 237 (443)
T ss_pred hhHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHHh-CCCceEEEeccccCCCCcCcccCCCHHHHHHHHHHHHHH
Confidence 43221 134556667777765555 5789999999999999999999999999999977652
Q ss_pred ---------ceEEEEecCCCcchhhHHHHHHHHHHHHcCCEEE-EEe-----cchhhhcccceEecChhcccc-ccccCC
Q psy5984 323 ---------YTLAVMHIGAPACGMNAAVRSFVRNCIYRGDTVI-GIH-----DGVEGLVAGNVQIMQWSDVTG-WVGQGG 386 (512)
Q Consensus 323 ---------~~iaIi~sGg~apG~NAair~~v~~~~~~G~~v~-g~~-----~G~~GL~~g~~~~l~~~~v~~-~~~~GG 386 (512)
.+++|++.-|-.+|.-|+..+++. .+..+. -.+ +|..+|++- +.. +..++-
T Consensus 238 ~~~eA~s~~~rv~iVEvMGR~sG~lA~~aaLA~----~~ad~ilIPE~~f~l~~~~~ll~~---------l~~r~~~~~~ 304 (443)
T PRK06830 238 AHVEANGAPNGIGLVKLMGRHSGFIAAYAALAS----KDVNFVLIPEVPFDLEGPNGLLAA---------LEKRLAERGH 304 (443)
T ss_pred HHHHHHHhCCcEEEEEECCCcccHHHHHHHHhc----CCCCEEEecCCCCCchhHHHHHHH---------HHHHHHhCCc
Confidence 356666666666666665444331 011111 111 111122210 000 001111
Q ss_pred c-eeecc------------cCCC----CCc-HHHHHHHHHHc----CCceEEEecCccchhhhhhhcCCCccccCchhHH
Q psy5984 387 A-MLGTK------------RTLP----EKK-LPQIAAKLKEL----KIQALLIIGGFEDEQGHMQQGGSPSPFDRNMGTK 444 (512)
Q Consensus 387 s-iLgt~------------R~~p----~~~-~~~i~~~l~~~----~i~~LvviGGf~s~lGh~QqGG~PstiDr~lG~~ 444 (512)
. ++-++ +... -.+ -+.+++.++++ ++.. - ---.-+||+|+||.|+++||.++++
T Consensus 305 ~VIVVAEGag~~l~~~~~~~Da~gn~~l~~ig~~L~~~i~~~~~~~~~~~--~--~r~~~pgy~qRg~~psa~Dr~~a~~ 380 (443)
T PRK06830 305 AVIVVAEGAGQELFDDTGETDASGNPKLGDIGLFLKDRIKEYFKARGIPI--N--LKYIDPSYIIRSVPANANDSVYCGF 380 (443)
T ss_pred eEEEEecCcccccccccccccccCCcccccHHHHHHHHHHHHhcccCCce--E--EEEccCCccccCCCCCHHHHHHHHH
Confidence 1 11111 0000 011 12244444442 1110 0 0012499999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCceeecCCCcEEEEEeecCceeEeeccchhh
Q psy5984 445 QAANTVEWMIDQLKKCTKPDGSVFTDSPETAVLMGVIRRQYCFTPLQTLKK 495 (512)
Q Consensus 445 tA~~ai~~l~~~l~~~a~s~~rv~~~~~~~a~vigl~g~~~~~~Pl~~l~~ 495 (512)
+|.+|+..+.. +.+.+++|+.+.+++++|++++..
T Consensus 381 lG~~AV~~~~~----------------G~tg~~Vg~~~~~~~~vPl~~v~~ 415 (443)
T PRK06830 381 LGQNAVHAAMA----------------GKTGMVVGRWNNRFVHLPIDLAVS 415 (443)
T ss_pred HHHHHHHHHHC----------------CCCCEEEEEECCEEEEEeHHHHhc
Confidence 99999976653 467899999999999999998874
No 29
>PLN02564 6-phosphofructokinase
Probab=99.96 E-value=5.1e-30 Score=272.68 Aligned_cols=168 Identities=21% Similarity=0.335 Sum_probs=152.2
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHH-cC-CEEEEEecchhhhcccceEecChhccccccccCCceeecccCCCCCcH
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIY-RG-DTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGAMLGTKRTLPEKKL 400 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~-~G-~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGsiLgt~R~~p~~~~ 400 (512)
.||||+++||+|||||++||++|+.+.. +| .+|||+++||.||+++++.+|+|+++.+|.++||++|||+|..+ +.
T Consensus 88 ~riaIlTsGGd~PGmNavIRavv~~l~~~yg~~~V~Gi~~Gy~GL~~~~~i~Lt~~~V~~i~~~GGTiLGTsR~~~--~~ 165 (484)
T PLN02564 88 VRACIVTCGGLCPGLNTVIREIVCGLSYMYGVTRILGIDGGYRGFYSRNTIPLTPKVVNDIHKRGGTILGTSRGGH--DT 165 (484)
T ss_pred eEEEEECCCCCCccHhHHHHHHHHHHHHhCCCeEEEEEccChHHhCCCCeEeCCHHHhhcHhhCCCceeccCCCcc--hH
Confidence 7999999999999999999999997654 35 69999999999999999999999999999999999999999864 68
Q ss_pred HHHHHHHHHcCCceEEEecCccchhhhhh-------h------cCCCccccCc-------hhHHHHHHHHHHHHHHHhhh
Q psy5984 401 PQIAAKLKELKIQALLIIGGFEDEQGHMQ-------Q------GGSPSPFDRN-------MGTKQAANTVEWMIDQLKKC 460 (512)
Q Consensus 401 ~~i~~~l~~~~i~~LvviGGf~s~lGh~Q-------q------GG~PstiDr~-------lG~~tA~~ai~~l~~~l~~~ 460 (512)
++++++|++++|++|++||||||+.|+.+ + .|+|+||||| +||+||++.+...+++++.+
T Consensus 166 ~~iv~~L~~~~Id~LivIGGDGS~~gA~~L~e~~~~~g~~i~VIGIPKTIDNDI~~tD~T~GFdTAv~~~~~aI~~i~~t 245 (484)
T PLN02564 166 SKIVDSIQDRGINQVYIIGGDGTQKGASVIYEEIRRRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVE 245 (484)
T ss_pred HHHHHHHHHhCCCEEEEECCchHHHHHHHHHHHHHHcCCCceEEEecccccCCCcCcccCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987631 2 4899999995 79999999999999999999
Q ss_pred cCCCC-ceee------cCCCcEEEEEeec--CceeEeeccc
Q psy5984 461 TKPDG-SVFT------DSPETAVLMGVIR--RQYCFTPLQT 492 (512)
Q Consensus 461 a~s~~-rv~~------~~~~~a~vigl~g--~~~~~~Pl~~ 492 (512)
|.|+. |+|+ ++||+|+..+|.+ .+++++|...
T Consensus 246 A~S~~~rv~iVEvMGR~aG~LAl~aaLA~~gad~iLIPE~p 286 (484)
T PLN02564 246 AESVENGIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESP 286 (484)
T ss_pred HHhcCCCEEEEEECCCCHHHHHHHHHHhhCCCCEEEeCCCC
Confidence 98875 9987 7899999999964 7999999653
No 30
>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=99.96 E-value=7.3e-30 Score=270.48 Aligned_cols=169 Identities=21% Similarity=0.301 Sum_probs=153.2
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHc-C-CEEEEEecchhhhcc---cceEecChhccccccccCCceeecccCCCC
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYR-G-DTVIGIHDGVEGLVA---GNVQIMQWSDVTGWVGQGGAMLGTKRTLPE 397 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~-G-~~v~g~~~G~~GL~~---g~~~~l~~~~v~~~~~~GGsiLgt~R~~p~ 397 (512)
.|++|+++||+|||||++||++|+.+... | ++|||+++||.||+. +++.+|+|+++.+|..+|||+|||+|..
T Consensus 81 ~riaIvtsGG~~PGmN~vIr~iv~~a~~~~gv~~V~Gi~~Gy~GL~~~~~~~~~~Lt~~~v~~i~~~GGTiLGTsR~~-- 158 (443)
T PRK06830 81 VKAAIVTCGGLCPGLNDVIRAIVLELHHHYGVRRILGIRYGYQGLIPRYGHDPVELTPEVVADIHEFGGTILGSSRGP-- 158 (443)
T ss_pred cEEEEECCCCCchHHHHHHHHHHHHHHHhCCCeEEEEEccCHHHHhhccCCCEEECCHHHHhhHHhCCCccccCCCCc--
Confidence 79999999999999999999999999864 5 799999999999998 8999999999999999999999999975
Q ss_pred CcHHHHHHHHHHcCCceEEEecCccchhhhhh-------h------cCCCccccCc-------hhHHHHHHHHHHHHHHH
Q psy5984 398 KKLPQIAAKLKELKIQALLIIGGFEDEQGHMQ-------Q------GGSPSPFDRN-------MGTKQAANTVEWMIDQL 457 (512)
Q Consensus 398 ~~~~~i~~~l~~~~i~~LvviGGf~s~lGh~Q-------q------GG~PstiDr~-------lG~~tA~~ai~~l~~~l 457 (512)
.+.++++++|++++|++|++||||||+.|+.+ + .|+||||||| +||+||++.+...++.+
T Consensus 159 ~~~~~iv~~L~~~~I~~L~vIGGdgT~~gA~~l~ee~~~~g~~I~VIGIPKTIDNDi~~td~S~GFdTAv~~a~~aI~~~ 238 (443)
T PRK06830 159 QDPEEIVDTLERMNINILFVIGGDGTLRGASAIAEEIERRGLKISVIGIPKTIDNDINFIQKSFGFETAVEKATEAIRCA 238 (443)
T ss_pred hhHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHHhCCCceEEEeccccCCCCcCcccCCCHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999987632 2 3899999995 79999999999999999
Q ss_pred hhhcCCC-Cceee------cCCCcEEEEEee--cCceeEeeccch
Q psy5984 458 KKCTKPD-GSVFT------DSPETAVLMGVI--RRQYCFTPLQTL 493 (512)
Q Consensus 458 ~~~a~s~-~rv~~------~~~~~a~vigl~--g~~~~~~Pl~~l 493 (512)
+.+|.|+ +|+|+ ++|++|+..++. +.+++++|....
T Consensus 239 ~~eA~s~~~rv~iVEvMGR~sG~lA~~aaLA~~~ad~ilIPE~~f 283 (443)
T PRK06830 239 HVEANGAPNGIGLVKLMGRHSGFIAAYAALASKDVNFVLIPEVPF 283 (443)
T ss_pred HHHHHHhCCcEEEEEECCCcccHHHHHHHHhcCCCCEEEecCCCC
Confidence 9999886 68887 799999999996 479999996543
No 31
>PTZ00286 6-phospho-1-fructokinase; Provisional
Probab=99.96 E-value=1.5e-29 Score=269.57 Aligned_cols=168 Identities=24% Similarity=0.303 Sum_probs=153.4
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHH-cC-CEEEEEecchhhhcccceEecChhccccccccCCceeecccCCCCCcH
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIY-RG-DTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGAMLGTKRTLPEKKL 400 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~-~G-~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGsiLgt~R~~p~~~~ 400 (512)
.||||+++||+|||||++||++|+.+.. ++ .+|||+++||.||+++++.+|+|+++.+|.++||++|||+|.. .+.
T Consensus 88 ~~iaIvT~GG~~PGlN~vIr~iv~~~~~~~~v~~V~Gi~~Gy~GL~~~~~i~Lt~~~V~~i~~~GGTiLGTSR~~--~~~ 165 (459)
T PTZ00286 88 VKAGIVTCGGLCPGLNVVIRELVMNLINNYGVKTIYGAKYGYKGLYKEDWIKLDPKDVKTIHRLGGTILGSSRGG--FDP 165 (459)
T ss_pred cEEEEECCCCCChHHHHHHHHHHHHHHHhcCCcEEEEEecCHHHhcCCCeEECCHHHhhhHHhCCCceeccCCCh--hhH
Confidence 7999999999999999999999999984 34 7999999999999999999999999999999999999999986 479
Q ss_pred HHHHHHHHHcCCceEEEecCccchhhhhh-------h------cCCCccccCc-------hhHHHHHHHHHHHHHHHhhh
Q psy5984 401 PQIAAKLKELKIQALLIIGGFEDEQGHMQ-------Q------GGSPSPFDRN-------MGTKQAANTVEWMIDQLKKC 460 (512)
Q Consensus 401 ~~i~~~l~~~~i~~LvviGGf~s~lGh~Q-------q------GG~PstiDr~-------lG~~tA~~ai~~l~~~l~~~ 460 (512)
++++++|++++|++|++||||||+.|+.+ + .|+||||||| +||+||++.+...++.++.+
T Consensus 166 ~~iv~~L~~~~I~~L~vIGGdgT~~~A~~L~ee~~~~g~~I~VIGIPKTIDNDI~~td~S~GFdTAv~~~~~aI~~~~~e 245 (459)
T PTZ00286 166 KVMVDTLIRHGINILFTLGGDGTHRGALAIYKELRRRKLNISVVGIPKTIDNDIPIIDESFGFQTAVEEAQNAIRAAYVE 245 (459)
T ss_pred HHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHHhCCCceEEEeccccCCCCCCcccCcCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987632 2 3899999995 79999999999999999999
Q ss_pred cCCCC-ceee------cCCCcEEEEEeec--CceeEeeccc
Q psy5984 461 TKPDG-SVFT------DSPETAVLMGVIR--RQYCFTPLQT 492 (512)
Q Consensus 461 a~s~~-rv~~------~~~~~a~vigl~g--~~~~~~Pl~~ 492 (512)
|.|++ ++|+ ++|++|+..++.+ .+++++|...
T Consensus 246 A~S~~~~v~iVEvMGR~sG~LAl~aaLA~~~ad~vlIPE~~ 286 (459)
T PTZ00286 246 AKSAKNGVGIVKLMGRDSGFIALHASVASADVNVCLIPEFD 286 (459)
T ss_pred HHHhcCcEEEEEecCcchhHHHHHHhhhhcCCCEEEeCCCC
Confidence 98886 7887 7999999999974 7999999754
No 32
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated
Probab=99.96 E-value=1.5e-29 Score=264.47 Aligned_cols=170 Identities=18% Similarity=0.218 Sum_probs=147.9
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHH--cCCEEEEEecchhhhcccceEecChh--cc-ccccccCCceeecccCCC-
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIY--RGDTVIGIHDGVEGLVAGNVQIMQWS--DV-TGWVGQGGAMLGTKRTLP- 396 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~--~G~~v~g~~~G~~GL~~g~~~~l~~~--~v-~~~~~~GGsiLgt~R~~p- 396 (512)
+||+|++|||||||||+++|++++.+.. .+++|||+++||.||+++++.+|+.. ++ ..+.++||++|||+|+.+
T Consensus 4 k~i~IltsGGdapGmNaaI~~vv~~a~~~~~~~~V~G~~~G~~GL~~~~~~~l~~~~~~~~~~i~~~GGt~LGtsR~~~~ 83 (403)
T PRK06555 4 KKVALLTAGGLAPCLSSAVGGLIERYTEIAPEVEIIAYRSGYQGLLLGDSIEITPAVRANAGLLHRYGGSPIGNSRVKLT 83 (403)
T ss_pred CEEEEECCCCCchhHHHHHHHHHHHHHhhcCCcEEEEEecCHHHhcCCCceeCChhHhhhhhHHHhCCCceeccCCCCcc
Confidence 6999999999999999999999998865 78999999999999999999999865 44 458999999999999876
Q ss_pred --------------CCcHHHHHHHHHHcCCceEEEecCccchhhhhh-------h------cCCCccccCc-------hh
Q psy5984 397 --------------EKKLPQIAAKLKELKIQALLIIGGFEDEQGHMQ-------Q------GGSPSPFDRN-------MG 442 (512)
Q Consensus 397 --------------~~~~~~i~~~l~~~~i~~LvviGGf~s~lGh~Q-------q------GG~PstiDr~-------lG 442 (512)
++.+++++++|++++||+|++||||||+.++.+ . .|+|+||||| +|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~~Id~Li~IGGdgS~~~a~~L~~~~~~~g~~i~vvgIPkTIDNDl~~td~t~G 163 (403)
T PRK06555 84 NVADCVKRGLVKEGENPLKVAAERLAADGVDILHTIGGDDTNTTAADLAAYLAENGYDLTVVGLPKTIDNDVVPIRQSLG 163 (403)
T ss_pred ccchhccccccccchHHHHHHHHHHHHcCCCEEEEECChhHHHHHHHHHHHHHHhCCCceEEEeeeeeeCCCCCccCCcC
Confidence 224789999999999999999999999866522 2 3899999995 79
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCceee-------cCCCcEEEEEee---------------------cCceeEeeccc
Q psy5984 443 TKQAANTVEWMIDQLKKCTKPDGSVFT-------DSPETAVLMGVI---------------------RRQYCFTPLQT 492 (512)
Q Consensus 443 ~~tA~~ai~~l~~~l~~~a~s~~rv~~-------~~~~~a~vigl~---------------------g~~~~~~Pl~~ 492 (512)
|+||++.+...+++++.++.||+|+|+ ++||+|+..++. +.+++++|...
T Consensus 164 f~TA~~~~~~ai~~l~~ta~s~~r~~~vvEvMGR~aG~LAl~aalA~~~~~~~~~~~~~~~~~~~~~gad~ilIPE~~ 241 (403)
T PRK06555 164 AWTAAEQGARFFDNVINEHSANPRMLIIHEVMGRNCGWLTAATARAYREWLDRQEYVPGFGLSAERWDIHAVYLPEMA 241 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCEEEEEEccCCchHHHHHHHHHhhccccccccccccccccccCCCCcEEEccCCC
Confidence 999999999999999999988877654 789998877776 56899999653
No 33
>PRK14072 6-phosphofructokinase; Provisional
Probab=99.95 E-value=4.1e-27 Score=249.36 Aligned_cols=160 Identities=19% Similarity=0.256 Sum_probs=141.7
Q ss_pred CEEEeCCCccCc-ccccccccCCchhhHHHHHHHcCCCcEEEEEeCCCccCCCCcc-----------------cHHHHHH
Q psy5984 1 TWPFQPLWPRKQ-ILCSPLNGLPKSTGRLACERTAGQRLNIIIVAEGAIDRDGKPI-----------------TAEKVKE 62 (512)
Q Consensus 1 d~iliPE~p~~~-~~~~~~~~~~~~~~~i~~~~~~gk~~~iIvVAEG~~d~~g~~i-----------------~~~~l~~ 62 (512)
|+|||||.|++. ++++ +|++.+++ |+++|||||||+.+.+|+++ .+++|++
T Consensus 211 d~iliPE~~~~~~~~~~----------~i~~~~~~-~~~~ivvVaEG~~~~~g~~i~e~~~~~D~~gh~~l~g~~~~La~ 279 (416)
T PRK14072 211 HLIYLPERPFDEEKFLA----------DVRAIVKR-YGYCVVVVSEGIRDADGKFIAEAGLAEDAFGHAQLGGVAPVLAN 279 (416)
T ss_pred cEEEccCCCCCHHHHHH----------HHHHHHHh-CCCeEEEEecCcccccccchhccccccCCCCCcccccHHHHHHH
Confidence 789999999998 8999 89888876 99999999999986655543 2677999
Q ss_pred HHHHhcCCceeEEeCCccccCCC--CCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCC-------eeEEechHHHH
Q psy5984 63 VVVENLKQDTRITVLGHVQRGGS--PSAFDRVLGCRMGAEAVMALMEATPGTEPCVMSLDGN-------QAVRLPLMECV 133 (512)
Q Consensus 63 ~i~~~~g~~~R~t~LGh~QRgG~--Psa~Dr~la~~~G~~AV~~l~~g~~~~~~~mv~i~~~-------~i~~vpl~e~~ 133 (512)
+|++++|+++|+++|||+||||+ ||++||++|++||..||+++++|++ ++||+++++ ++..+||++++
T Consensus 280 ~i~~~~g~~~R~~~LG~~QRgg~~~ps~~Dr~~a~~lG~~AV~~~~~G~~---g~mv~l~~~~~~~y~~~~~~vpl~~v~ 356 (416)
T PRK14072 280 LIKEKLGKKVHWAVLDYLQRAARHIASKTDVEEAYAVGKAAVEYALAGKN---GVMPAIRRTSDDPYKWKIGLVPLSKVA 356 (416)
T ss_pred HHHHHhCCeEEEEeCChhhhCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC---CceEEEEcCCCCcceeEEEcccHHHHH
Confidence 99999999999999999999999 9999999999999999999999998 699999998 99999999999
Q ss_pred hhcccchHhh--------hHHHHHHHHHhcCCCCCCCccccchHHhhhhhh
Q psy5984 134 EKTKAVAKAM--------ADKQWDLAVQLRGRQVFPHPSFARNLETYKMLT 176 (512)
Q Consensus 134 ~~~k~v~~~~--------~~~~~~~a~~l~g~~~~~~~~f~~~~~~~~~~~ 176 (512)
+++|.+|++| .+...+.+..|.+.+..| .|.+.+..|..+.
T Consensus 357 ~~~k~v~~~~i~~~~~~v~~~~~~y~~pli~ge~~~--~~~~~lp~~~~~~ 405 (416)
T PRK14072 357 NKEKKMPPEFINEDGNGITEAFRRYLRPLIQGEPYP--PYKNGLPDYVRLK 405 (416)
T ss_pred hhcCcCCHHHHhcCCCCcCHHHHHHHHHHhCCCCCC--cccCCCcchhhhc
Confidence 9889999875 455668899999765555 8999888886653
No 34
>PLN02564 6-phosphofructokinase
Probab=99.94 E-value=1.6e-26 Score=246.04 Aligned_cols=152 Identities=18% Similarity=0.202 Sum_probs=136.3
Q ss_pred CEEEeCCCccCc----ccccccccCCchhhHHHHHHHcCCCcEEEEEeCCC--------------ccCCCCccc---HHH
Q psy5984 1 TWPFQPLWPRKQ----ILCSPLNGLPKSTGRLACERTAGQRLNIIIVAEGA--------------IDRDGKPIT---AEK 59 (512)
Q Consensus 1 d~iliPE~p~~~----~~~~~~~~~~~~~~~i~~~~~~gk~~~iIvVAEG~--------------~d~~g~~i~---~~~ 59 (512)
|+|||||.|++. ++++ .|++++++ ++++|||||||+ +|+.|++.. +++
T Consensus 278 d~iLIPE~pf~le~~~~ll~----------~i~~rl~~-~~~~VIVVAEGagq~~~~~~~~~~~~~Da~Gn~~l~dig~~ 346 (484)
T PLN02564 278 DCCLIPESPFYLEGKGGLFE----------FIEKRLKE-NGHMVIVVAEGAGQDLIAESMESSDLQDASGNKLLLDVGLW 346 (484)
T ss_pred CEEEeCCCCCCcchHHHHHH----------HHHHHHhc-cCCEEEEEeCCCccchhhhhhcccccccccCCcccCcHHHH
Confidence 799999999996 4777 88888877 799999999998 466777653 678
Q ss_pred HHHHHHHhc------CCceeEEeCCccccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCCeeEEechHHHH
Q psy5984 60 VKEVVVENL------KQDTRITVLGHVQRGGSPSAFDRVLGCRMGAEAVMALMEATPGTEPCVMSLDGNQAVRLPLMECV 133 (512)
Q Consensus 60 l~~~i~~~~------g~~~R~t~LGh~QRgG~Psa~Dr~la~~~G~~AV~~l~~g~~~~~~~mv~i~~~~i~~vpl~e~~ 133 (512)
|+++|++++ ++++|+++|||+||||+|+|+||++|++||..||+++++|++ ++||++.+++++++||++++
T Consensus 347 La~~I~~~~~~~~~~~~~~r~i~lgy~qRgg~p~a~Dri~a~~lG~~AV~~~~aG~t---g~mVg~~~~~~~~vPi~~~~ 423 (484)
T PLN02564 347 LSQKIKDHFTKVKKMPINLKYIDPTYMIRAIPSNASDNVYCTLLAHSAVHGAMAGYT---GFTVGPVNGRHAYIPFYRIT 423 (484)
T ss_pred HHHHHHHHhhhcccCCceEEEecCCchhcCCCCcHHHHHHHHHHHHHHHHHHHcCCC---CEEEEEECCEEEEEEHHHHh
Confidence 999998877 689999999999999999999999999999999999999998 79999999999999999999
Q ss_pred hhcccchHhhhHHHHHHHHHhcCCCCCCCccccchHHhhh
Q psy5984 134 EKTKAVAKAMADKQWDLAVQLRGRQVFPHPSFARNLETYK 173 (512)
Q Consensus 134 ~~~k~v~~~~~~~~~~~a~~l~g~~~~~~~~f~~~~~~~~ 173 (512)
..+|+|+ ++.+.|..++.+.|+ |+|.++-+.-.
T Consensus 424 ~~~~~v~--~~~~~w~~~l~~t~q-----p~f~~~~~~~~ 456 (484)
T PLN02564 424 EKQNKVV--ITDRMWARLLSSTNQ-----PSFLSPKDVLE 456 (484)
T ss_pred ccCCccC--CChHHHHHHHHHcCC-----CCccCchhhhh
Confidence 9999996 579999999999999 58988766654
No 35
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase. Diphosphate--fructose-6-phosphate 1-phosphotransferase catalyzes the addition of phosphate from diphosphate (PPi) to fructose 6-phosphate to give fructose 1,6-bisphosphate (EC 2.7.1.90). The enzyme is also known as pyrophosphate-dependent phosphofructokinase. The usage of PPi-dependent enzymes in glycolysis presumably frees up ATP for other processes. TIGR02482 represents the ATP-dependent 6-phosphofructokinase enzyme contained within Pfam pfam00365: Phosphofructokinase. This model hits primarily bacterial, plant alpha, and plant beta sequences.
Probab=99.93 E-value=1.2e-26 Score=251.46 Aligned_cols=170 Identities=18% Similarity=0.276 Sum_probs=149.8
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHc--CCEEEEEecchhhhcccceEecChhccccccccCCc-eeecccCCC--C
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYR--GDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGA-MLGTKRTLP--E 397 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~--G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGs-iLgt~R~~p--~ 397 (512)
+||||++|||||||||++++++++.+... +++|||+++||.||+++++.+|+++++.+|.++||+ +|||+|+.. +
T Consensus 68 ~rIgIl~sGG~aPG~N~vI~gv~~~~~~~~~~~~v~G~~~G~~GLl~~~~~~Lt~~~v~~~~~~GG~~~LGssR~k~~~~ 147 (539)
T TIGR02477 68 LKIGVILSGGQAPGGHNVISGLFDALKKLNPNSKLYGFIGGPLGLLDNNYVELTKELIDTYRNTGGFDIIGSGRTKIETE 147 (539)
T ss_pred eEEEEECCCCCChHHHHHHHHHHHHHHHhCCCcEEEEEecChHHhcCCCeEeCCHHHHhHHHhCCCchhhcCCCCCCCCH
Confidence 79999999999999999999999887754 899999999999999999999999999999999996 999999875 3
Q ss_pred CcHHHHHHHHHHcCCceEEEecCccchhhhhh-------h------cCCCccccCc---------hhHHHHHHHHHHHHH
Q psy5984 398 KKLPQIAAKLKELKIQALLIIGGFEDEQGHMQ-------Q------GGSPSPFDRN---------MGTKQAANTVEWMID 455 (512)
Q Consensus 398 ~~~~~i~~~l~~~~i~~LvviGGf~s~lGh~Q-------q------GG~PstiDr~---------lG~~tA~~ai~~l~~ 455 (512)
+.+++++++|++++|++|++|||+||+.++.+ . .|+|+||||| +||+||++.+..+++
T Consensus 148 e~~~~~~~~l~~~~Id~LviIGGdgS~~~A~~Lae~~~~~g~~i~VIGIPkTIDNDl~~~~td~s~GFdTA~~~~~~~I~ 227 (539)
T TIGR02477 148 EQFAKALTTAKKLKLDGLVIIGGDDSNTNAALLAEYFAKHGLKTQVIGVPKTIDGDLKNQFIETSFGFDTACKIYSELIG 227 (539)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHhcCCCceEEEEeeeecCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 46999999999999999999999999866521 2 4899999995 699999999999999
Q ss_pred HHhhhc-CCCCceee------cCCCcEEEEEee-cCceeEeeccc
Q psy5984 456 QLKKCT-KPDGSVFT------DSPETAVLMGVI-RRQYCFTPLQT 492 (512)
Q Consensus 456 ~l~~~a-~s~~rv~~------~~~~~a~vigl~-g~~~~~~Pl~~ 492 (512)
++..++ .+++++|+ +++|+|+.++++ +.+++++|..-
T Consensus 228 ~i~~Da~s~~~~~~~VevMGR~aG~LAl~~aLat~~~iilIpE~~ 272 (539)
T TIGR02477 228 NICRDALSAKKYWHFIRLMGRSASHIALECALQTHPNVCIIGEEV 272 (539)
T ss_pred HHHHHHHhcCCcEEEEEECCCCcHHHHHHHHHhcCCCEEEecCcc
Confidence 995554 55567766 688999888886 68999999653
No 36
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=99.93 E-value=2e-26 Score=250.22 Aligned_cols=169 Identities=20% Similarity=0.309 Sum_probs=149.3
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHH--HHcCCEEEEEecchhhhcccceEecChhccccccccCCc-eeecccCCC--C
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNC--IYRGDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGA-MLGTKRTLP--E 397 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~--~~~G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGs-iLgt~R~~p--~ 397 (512)
+||+|++|||||||||++++++++.. ...+++|||+++||.||+++++.+|+++++.+|.++||+ +|||+|+.+ +
T Consensus 71 ~~IgIl~sGG~aPG~N~vI~gv~~~~~~~~~~~~v~G~~~G~~GLl~~~~~~Lt~~~v~~~~~~GG~~~LGssR~k~~~~ 150 (555)
T PRK07085 71 LKVGVILSGGQAPGGHNVIAGLFDGLKKLNPDSKLFGFIGGPLGLLNGKYIEITEEVIDEYRNTGGFDMIGSGRTKIETE 150 (555)
T ss_pred eEEEEECCCCCChHHHHHHHHHHHHHHHhcCCCEEEEEecChHHhcCCCeEECCHHHHhHHHhCCChhhhcCCCCCCCCH
Confidence 79999999999999999999998744 457899999999999999999999999999999999998 999999875 3
Q ss_pred CcHHHHHHHHHHcCCceEEEecCccchhhhhh-------------hcCCCccccCc---------hhHHHHHHHHHHHHH
Q psy5984 398 KKLPQIAAKLKELKIQALLIIGGFEDEQGHMQ-------------QGGSPSPFDRN---------MGTKQAANTVEWMID 455 (512)
Q Consensus 398 ~~~~~i~~~l~~~~i~~LvviGGf~s~lGh~Q-------------qGG~PstiDr~---------lG~~tA~~ai~~l~~ 455 (512)
+.++++.++|++++|++|++|||+||+.++.+ -.|+|+||||| +||+||++.+..+++
T Consensus 151 e~~~~i~~~l~~~~Id~LviIGGd~S~~~A~~Lae~~~~~~~~i~VIGIPkTIDNDl~~~~id~s~GFdTA~~~~~~~I~ 230 (555)
T PRK07085 151 EQKEACLETVKKLKLDGLVIIGGDDSNTNAAILAEYFAKHGCKTQVIGVPKTIDGDLKNEFIETSFGFDTATKTYSEMIG 230 (555)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHHhCCCccEEEEeeeecCCCCCCcccccCCHHHHHHHHHHHHH
Confidence 46999999999999999999999999866521 24899999995 799999999999999
Q ss_pred HHhhhc-CCCCceee------cCCCcEEEEEee-cCceeEeecc
Q psy5984 456 QLKKCT-KPDGSVFT------DSPETAVLMGVI-RRQYCFTPLQ 491 (512)
Q Consensus 456 ~l~~~a-~s~~rv~~------~~~~~a~vigl~-g~~~~~~Pl~ 491 (512)
++..++ .+++++|+ +++|+|...+++ +.+++++|..
T Consensus 231 ~i~~Da~s~~~~~~~VevMGR~aG~LAl~~aLat~~~iilIpE~ 274 (555)
T PRK07085 231 NISRDALSAKKYWHFIKLMGRSASHIALECALQTHPNICLISEE 274 (555)
T ss_pred HHHHHHHhcCCcEEEEEECCCChHHHHHHHHHhcCCCEEEecCc
Confidence 996655 44567776 688999888886 6899999975
No 37
>KOG2440|consensus
Probab=99.93 E-value=8.4e-26 Score=245.09 Aligned_cols=168 Identities=35% Similarity=0.526 Sum_probs=150.2
Q ss_pred eEEEEecCCCcchhhHHHHHHHHHHHHcCCEEEEEecchhhhcccceEecChhccccccccCCceeecccCCCCC-cHHH
Q psy5984 324 TLAVMHIGAPACGMNAAVRSFVRNCIYRGDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGAMLGTKRTLPEK-KLPQ 402 (512)
Q Consensus 324 ~iaIi~sGg~apG~NAair~~v~~~~~~G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGsiLgt~R~~p~~-~~~~ 402 (512)
+++++..|.++.|||+++++++++++..|+++|++.+|++||+.++..++.|.||..|..+||+.++|+|..|++ +++.
T Consensus 374 ~~~ii~~g~~~~~lnaa~~~~v~~a~~~G~~~~~i~~~~~gl~~d~~~~~~~~dv~~w~~~ggs~~gtk~~~~e~~~~~~ 453 (666)
T KOG2440|consen 374 PGAIGLFGAPAAGLNAAGHSVLRYAEGAGQDVIAISNGFEGLAKDALGELIWKDVGLWLSQGGSALGTKRETPEKMDLKY 453 (666)
T ss_pred ccceeeechhhhHHHHHHHHHHHHhhhcCceeEeeccchhhhhhhhhhhhHHHHhhcccccCchhheecccCcccccHHH
Confidence 389999999999999999999999999999999999999999999999999999999999999999999998854 8999
Q ss_pred HHHHHHHcCCceEEEecCccchhhhhh-hc-------------CCCccccC-------chhHHHHHHHHHHHHHHHhhhc
Q psy5984 403 IAAKLKELKIQALLIIGGFEDEQGHMQ-QG-------------GSPSPFDR-------NMGTKQAANTVEWMIDQLKKCT 461 (512)
Q Consensus 403 i~~~l~~~~i~~LvviGGf~s~lGh~Q-qG-------------G~PstiDr-------~lG~~tA~~ai~~l~~~l~~~a 461 (512)
|...|.++++++++++|||++++++.| +| -+|.|+-| +.|.+|+.+++...++..++++
T Consensus 454 I~~~~~~r~i~gl~~~ggf~a~~~~~~l~g~~~~yt~f~i~~v~ip~t~snnvpgt~~s~gvdt~~N~~~~~~d~t~Q~a 533 (666)
T KOG2440|consen 454 IAPTLMKRKIDGLAIDGGFEALLAQSALHGARAGYTGFDIPMVNIPATYSNNVPGTEFSLGVDTALNAWARVCDSTKQSA 533 (666)
T ss_pred hHHHHHHhccccceeecchHHHHHHHHHhhhhcCCCCcccceEEeeeeecCCccccccccccchhHhhhhhhhhhccCCc
Confidence 999999999999999999999988765 21 25777755 4799999999999999999987
Q ss_pred -CCCCceee------cCCCcEEEEEee-cCceeEeecc
Q psy5984 462 -KPDGSVFT------DSPETAVLMGVI-RRQYCFTPLQ 491 (512)
Q Consensus 462 -~s~~rv~~------~~~~~a~vigl~-g~~~~~~Pl~ 491 (512)
.+..++|+ +++++|.+.|++ +.+..++|+.
T Consensus 534 ~~T~~~vf~~e~~gg~~gyla~~~~l~~ga~~a~v~e~ 571 (666)
T KOG2440|consen 534 FGTKRRVFVVETMGGYSGYLATMTGLAPGADAAYVPEE 571 (666)
T ss_pred ccccceeEEEEecCCCccceeccccccccccccccccc
Confidence 56788998 478888888885 7888888853
No 38
>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include pyrophosphate-dependent phosphofructokinases. These are found in bacteria as well as plants. These may be dimeric nonallosteric enzymes as in bacteria or allosteric heterotetramers as in plants.
Probab=99.93 E-value=3.2e-26 Score=247.87 Aligned_cols=171 Identities=18% Similarity=0.285 Sum_probs=150.2
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHc--CCEEEEEecchhhhcccceEecChhccccccccCCc-eeecccCCC--C
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYR--GDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGA-MLGTKRTLP--E 397 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~--G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGs-iLgt~R~~p--~ 397 (512)
+||+|++|||||||||++++++++.+... +++|||+++||.||+++++.+|+++++.+|.++||+ +|||+|+.. +
T Consensus 73 ~~IgIl~SGG~aPGiNnvI~gv~~~~~~~~~~~~v~G~~~G~~GLl~~~~i~Lt~~~v~~~~~~GGsd~LGs~R~k~~~~ 152 (550)
T cd00765 73 LKIGIVLSGGQAPGGHNVISGLFDYLKERAKGSTLYGFKGGPAGILKCDYIELNAEYIQPYRNTGGFDMICSGRTKIETE 152 (550)
T ss_pred CEEEEECCCCCcHhHHHHHHHHHHHHHHhcCCcEEEEEccCHHHhcCCCeEECCHHHHhHHHhCCChhhhcCcCCCCCCH
Confidence 79999999999999999999999988754 899999999999999999999999999999999999 999999875 3
Q ss_pred CcHHHHHHHHHHcCCceEEEecCccchhhhhh-------h------cCCCccccCc---------hhHHHHHHHHHHHHH
Q psy5984 398 KKLPQIAAKLKELKIQALLIIGGFEDEQGHMQ-------Q------GGSPSPFDRN---------MGTKQAANTVEWMID 455 (512)
Q Consensus 398 ~~~~~i~~~l~~~~i~~LvviGGf~s~lGh~Q-------q------GG~PstiDr~---------lG~~tA~~ai~~l~~ 455 (512)
+.++++.+.|++++|++|++|||+||+.++.+ + .|+|+||||| +||+||++.+..+++
T Consensus 153 e~~~~i~~~l~~~~Id~LviIGGddS~~~A~~Lae~~~~~g~~i~VIGVPKTIDNDl~~t~id~s~GFdTA~k~~a~~I~ 232 (550)
T cd00765 153 DQFKQAEETAKKLDLDALVVIGGDDSNTNAALLAENFRSKGLKTRVIGVPKTIDGDLKNKEIETSFGFDTATKIYSELIG 232 (550)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHhcCCCceEEEEeeeecCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 46899999999999999999999999865421 2 3899999995 699999999999999
Q ss_pred HHhhhc-CCCCceee------cCCCcEEEEEee-cCceeEeeccch
Q psy5984 456 QLKKCT-KPDGSVFT------DSPETAVLMGVI-RRQYCFTPLQTL 493 (512)
Q Consensus 456 ~l~~~a-~s~~rv~~------~~~~~a~vigl~-g~~~~~~Pl~~l 493 (512)
++..++ .++.++++ +++|+|+..+++ +.+++++|..-.
T Consensus 233 ni~~Da~s~~~~~~~VEvMGR~aG~LAl~~aLat~p~lilIpE~~~ 278 (550)
T cd00765 233 NVMRDARSTGKYWHFVKLMGRSASHIALECALKTHPNICIISEEVS 278 (550)
T ss_pred HHHHHHHHcCCcEEEEEeCCCchHHHHHHHHHhcCCCEEEecCccc
Confidence 999655 45566654 688999888886 789999997643
No 39
>PLN02251 pyrophosphate-dependent phosphofructokinase
Probab=99.92 E-value=1e-25 Score=244.46 Aligned_cols=169 Identities=16% Similarity=0.257 Sum_probs=150.7
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHc--CCEEEEEecchhhhcccceEecChhccccccccCCc-eeecccCCC--C
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYR--GDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGA-MLGTKRTLP--E 397 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~--G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGs-iLgt~R~~p--~ 397 (512)
+||||++|||+|||||++|+++++.+... +.+|||+++||.||+++++.+|+.+++..|.++||+ +|||+|+.. +
T Consensus 97 ~~IGIv~sGG~APG~nnvI~Gv~~~a~~~~~~~~vyG~~~G~~GLl~~~~v~Lt~~~v~~~~n~GG~dlLGS~R~k~~~~ 176 (568)
T PLN02251 97 LKIGVVLSGGQAPGGHNVISGIFDYLQEHAKGSVLYGFKGGPAGIMKCKYVELTAEFIYPYRNQGGFDMICSGRDKIETP 176 (568)
T ss_pred ceEEEECcCCCchhHHHHHHHHHHHHHHhCCCCEEEEEccChHHhcCCCeEECCHHHhhhhhhCCCceEecccCCCcCCH
Confidence 79999999999999999999999998764 899999999999999999999999999999999999 899999853 3
Q ss_pred CcHHHHHHHHHHcCCceEEEecCccchhhhh-------------hhcCCCccccCc---------hhHHHHHHHHHHHHH
Q psy5984 398 KKLPQIAAKLKELKIQALLIIGGFEDEQGHM-------------QQGGSPSPFDRN---------MGTKQAANTVEWMID 455 (512)
Q Consensus 398 ~~~~~i~~~l~~~~i~~LvviGGf~s~lGh~-------------QqGG~PstiDr~---------lG~~tA~~ai~~l~~ 455 (512)
+.++++.++|++++|++|++|||+||+.++. +-.|+|+||||| +||+||++.+..+++
T Consensus 177 e~~~~~~~~l~~l~Id~LViIGGddS~~~A~~Lae~~~~~g~~i~VIGVPKTIDNDL~~td~e~s~GFdTA~k~~a~~I~ 256 (568)
T PLN02251 177 EQFKQAEETATKLDLDGLVVIGGDDSNTNACLLAEYFRAKNLKTRVIGCPKTIDGDLKSKEVPTSFGFDTACKIYSEMIG 256 (568)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHhcCCCeeEEEeCceEeCCCCCCcCCCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999986542 124899999995 699999999999999
Q ss_pred HHhhhcCCCCcee--e-----cCCCcEEEEEee-cCceeEeecc
Q psy5984 456 QLKKCTKPDGSVF--T-----DSPETAVLMGVI-RRQYCFTPLQ 491 (512)
Q Consensus 456 ~l~~~a~s~~rv~--~-----~~~~~a~vigl~-g~~~~~~Pl~ 491 (512)
++..++.|++|+| + +++|+|+.++++ +.+++++|.+
T Consensus 257 ni~~da~S~~k~~~~VevMGR~aG~LAL~~aLat~pniilIpEe 300 (568)
T PLN02251 257 NVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEE 300 (568)
T ss_pred HHHHHHHhhCCEEEEEEeCCCchHHHHHHHHHhhCCCEEEecCc
Confidence 9999998887543 3 688888888886 6899999965
No 40
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=99.92 E-value=7.8e-26 Score=247.14 Aligned_cols=169 Identities=17% Similarity=0.252 Sum_probs=149.7
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHc--CCEEEEEecchhhhcccceEecChhccccccccCCc-eeecccCCC--C
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYR--GDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGA-MLGTKRTLP--E 397 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~--G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGs-iLgt~R~~p--~ 397 (512)
+||||+++||+|||||++|+++++.+... +++|||+++||.||+++++.+|+++++.+|.++||+ +|||+|... +
T Consensus 80 ~rIgIv~sGG~APG~nnvI~Gvv~~~~~~~~~~~V~G~~~G~~GLl~~~~v~Lt~~~v~~~~n~GG~~iLGSsR~~l~~~ 159 (610)
T PLN03028 80 VRVGVVFCGRQSPGGHNVIWGLHDALKAHNPNSVLLGFLGGTEGLFAQKTLEITDDVLSTYKNQGGYDLLGRTKDQIRTT 159 (610)
T ss_pred cEEEEEccCCCCccHHHHHHHHHHHHHHhCCCcEEEEEccCHHHhcCCCeEECCHHHHHHHHhcCCchhccCcCCCcCCH
Confidence 79999999999999999999999988765 689999999999999999999999999999999998 899999653 3
Q ss_pred CcHHHHHHHHHHcCCceEEEecCccchhhhhh-------h------cCCCccccCc---------hhHHHHHHHHHHHHH
Q psy5984 398 KKLPQIAAKLKELKIQALLIIGGFEDEQGHMQ-------Q------GGSPSPFDRN---------MGTKQAANTVEWMID 455 (512)
Q Consensus 398 ~~~~~i~~~l~~~~i~~LvviGGf~s~lGh~Q-------q------GG~PstiDr~---------lG~~tA~~ai~~l~~ 455 (512)
+.++++.++|++++||+|++|||+||+.++.+ + .|+|+||||| +||+||++.+..+++
T Consensus 160 e~~~~i~e~l~~l~Id~LvvIGGddS~~~A~~Lae~~~~~~~~i~VIGIPKTIDNDL~~~~td~s~GFdTA~k~~ae~I~ 239 (610)
T PLN03028 160 EQVNAALAACEALKLDGLVIIGGVTSNTDAAQLAETFAEAKCKTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLIS 239 (610)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHHcCCCceEEEeceeeeCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 46899999999999999999999999866421 2 3999999995 699999999999999
Q ss_pred HHhhhcCCC-Cceee------cCCCcEEEEEee-cCceeEeecc
Q psy5984 456 QLKKCTKPD-GSVFT------DSPETAVLMGVI-RRQYCFTPLQ 491 (512)
Q Consensus 456 ~l~~~a~s~-~rv~~------~~~~~a~vigl~-g~~~~~~Pl~ 491 (512)
++..++.|+ .++|+ +++|+|+.++++ +.+++++|.+
T Consensus 240 ni~~dA~S~~~~~~~VevMGR~aG~LAl~~aLat~pniilI~EE 283 (610)
T PLN03028 240 NVCTDALSAEKYYYFIRLMGRKASHVALECALQSHPNMVILGEE 283 (610)
T ss_pred HHHHHHHhhCCeEEEEEeCCcchHHHHHHHHHhcCCCEEEecCc
Confidence 999999776 57765 688888888886 6788888753
No 41
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated
Probab=99.92 E-value=7.2e-25 Score=229.33 Aligned_cols=139 Identities=17% Similarity=0.066 Sum_probs=122.4
Q ss_pred CEEEeCCCccCc-ccccccccCCchhhHHHHHHHcCCCcEEEEEeCCCcc-----------------CCCCcc-----cH
Q psy5984 1 TWPFQPLWPRKQ-ILCSPLNGLPKSTGRLACERTAGQRLNIIIVAEGAID-----------------RDGKPI-----TA 57 (512)
Q Consensus 1 d~iliPE~p~~~-~~~~~~~~~~~~~~~i~~~~~~gk~~~iIvVAEG~~d-----------------~~g~~i-----~~ 57 (512)
|+|||||.|++. ++++ +|++.+++ |+++|||||||+.+ +.|+.. .+
T Consensus 233 d~ilIPE~~~~~e~~~~----------~ik~~~~~-k~~~iIvVaEG~~~~~~~~~~~~~g~~~~~Da~G~~~l~~~~~g 301 (403)
T PRK06555 233 HAVYLPEMAFDLEAEAE----------RLKAVMDE-VGNVNIFLSEGAGLDAIVAEMEAAGEEVKRDAFGHVKLDTINPG 301 (403)
T ss_pred cEEEccCCCCCHHHHHH----------HHHHHHHh-CCCEEEEEeCCCCcccchhhhhhccCccccccccceecCCCcHH
Confidence 789999999998 8888 89888877 99999999999953 233321 26
Q ss_pred HHHHHHHHHhcCCc-eeEEeCCccccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEE---eCCeeEEechHHHH
Q psy5984 58 EKVKEVVVENLKQD-TRITVLGHVQRGGSPSAFDRVLGCRMGAEAVMALMEATPGTEPCVMSL---DGNQAVRLPLMECV 133 (512)
Q Consensus 58 ~~l~~~i~~~~g~~-~R~t~LGh~QRgG~Psa~Dr~la~~~G~~AV~~l~~g~~~~~~~mv~i---~~~~i~~vpl~e~~ 133 (512)
++|+++|+++++.+ +|+++|||+||||+||++||++|++||..||+++++|++ + ||++ ++|+++.+||++++
T Consensus 302 ~~la~~i~~~~g~e~~r~~~lGy~qRgg~psa~Dr~la~~lG~~AV~~~~~G~s---g-~v~~~~~~~g~~~~vp~~~~~ 377 (403)
T PRK06555 302 AWFAKQFAELLGAEKVMVQKSGYFARSAPANAEDLRLIKSMVDLAVECALRGVS---G-VIGHDEEQGGKLRAIEFPRIK 377 (403)
T ss_pred HHHHHHHHHHhCCCceEEecCChhhcCCCCCHHHHHHHHHHHHHHHHHHHCCCC---C-eEEEEeeeCCEEEEEEHHHHh
Confidence 78999999999996 999999999999999999999999999999999999998 5 6788 89999999999988
Q ss_pred hhcccchHhhhHHHHHHHHHhcCC
Q psy5984 134 EKTKAVAKAMADKQWDLAVQLRGR 157 (512)
Q Consensus 134 ~~~k~v~~~~~~~~~~~a~~l~g~ 157 (512)
.+ |++++ +.++|...+...|+
T Consensus 378 ~~-k~~~~--~~~~~~~~~~~~~q 398 (403)
T PRK06555 378 GG-KAFDT--STPWFTELLDEIGQ 398 (403)
T ss_pred cC-CCCCC--CHHHHHHHHHhhCC
Confidence 74 77764 57799999999998
No 42
>PTZ00287 6-phosphofructokinase; Provisional
Probab=99.91 E-value=3.1e-25 Score=255.51 Aligned_cols=169 Identities=21% Similarity=0.263 Sum_probs=149.0
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHc--CCEEEEEecchhhhcccceEecChhccccccccCCc-eeecccCCC--C
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYR--GDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGA-MLGTKRTLP--E 397 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~--G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGs-iLgt~R~~p--~ 397 (512)
+||||+++||||||||++++++++.+... |++|||+++||.||+++++.+|+|.++.+|.++||+ +|||+|... +
T Consensus 178 ~rIgIl~SGGpAPGmNavI~Gvv~~a~~~~~g~~VyG~~~G~~GLl~~~~veLt~~~V~~~~n~GGs~iLGSgR~k~~~~ 257 (1419)
T PTZ00287 178 LKIGIILSGGPAPGGHNVISGIYDYAKRYNEQSQVIGFLGGIDGLYSKNYVTITDSLMNRFRNLGGFNMLWSGRGKVRNK 257 (1419)
T ss_pred eEEEEEccCCCcHhHHHHHHHHHHHHHHhCCCCEEEEEccChHHhcCCCeEECCHHHHhhHHhCCChhHhhCCCCCCCCH
Confidence 79999999999999999999999998754 899999999999999999999999999999999997 799999764 3
Q ss_pred CcHHHHHHHHHHcCCceEEEecCccchhhhhh-------------hcCCCccccCc---------hhHHHHHHHHHHHHH
Q psy5984 398 KKLPQIAAKLKELKIQALLIIGGFEDEQGHMQ-------------QGGSPSPFDRN---------MGTKQAANTVEWMID 455 (512)
Q Consensus 398 ~~~~~i~~~l~~~~i~~LvviGGf~s~lGh~Q-------------qGG~PstiDr~---------lG~~tA~~ai~~l~~ 455 (512)
++++++++.|++++||+|++||||||+.++.+ -.|+|+||||| +||+||++.+..+++
T Consensus 258 e~~~ki~e~lkkl~Id~LViIGGddS~~~A~~Lae~~~~~gi~i~VIGIPKTIDNDL~~~gTD~S~GFDTA~n~iae~I~ 337 (1419)
T PTZ00287 258 DDLIAIENIVAKLKLNGLVIIGGDGSNSNAALISEYFAERQIPISIIGIPKTIDGDLKSEAIEISFGFDTATKTYSEVIG 337 (1419)
T ss_pred HHHHHHHHHHHHcCCCEEEEECChhHHHHHHHHHHHHHhcCCCeeEEEEeeeecCCCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 56999999999999999999999999866532 14899999996 689999999999999
Q ss_pred HHhhhc-CCCCceee------cCCCcEEEEEee-cCceeEeecc
Q psy5984 456 QLKKCT-KPDGSVFT------DSPETAVLMGVI-RRQYCFTPLQ 491 (512)
Q Consensus 456 ~l~~~a-~s~~rv~~------~~~~~a~vigl~-g~~~~~~Pl~ 491 (512)
++...+ .+++++|+ ++||+|+..|++ +.+++++|..
T Consensus 338 ni~~D~~Ss~~~~~VVEVMGR~AG~LAl~~aLAtgAdlilIPEe 381 (1419)
T PTZ00287 338 NLCTDVKTGHNVYHVVRVMGRSASHVVLECALQTRPNIVLIGEE 381 (1419)
T ss_pred HHHHHHHHhCCeEEEEEECCCcchHHHHHHHHhcCCCEEEecCc
Confidence 997754 44556544 789999999996 7899999974
No 43
>PTZ00468 phosphofructokinase family protein; Provisional
Probab=99.91 E-value=7e-25 Score=251.03 Aligned_cols=169 Identities=18% Similarity=0.304 Sum_probs=151.1
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHH--HcCCEEEEEecchhhhcccceEecChhccccccccCCc-eeecccCCC--C
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCI--YRGDTVIGIHDGVEGLVAGNVQIMQWSDVTGWVGQGGA-MLGTKRTLP--E 397 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~--~~G~~v~g~~~G~~GL~~g~~~~l~~~~v~~~~~~GGs-iLgt~R~~p--~ 397 (512)
+||||+++||+|||||++|+++++.+. ..+.+|||+++||.||+++++.+|++.++.+|.++||+ +|||+|... +
T Consensus 103 krIGILtSGGdAPG~NnvI~gv~~~l~~~~~~~~VyGf~~G~~GLl~~~~ieLt~~~V~~i~n~GGt~iLGS~R~kl~~e 182 (1328)
T PTZ00468 103 RRIGVVLSGGQASGGHNVIAGLMSYIKLCNQSSQLFGFLGGPEGVYSERYRELTEDDINGILNQGGFNIICSGRHKIETE 182 (1328)
T ss_pred CEEEEECcCCCchhHHHHHHHHHHHHHHhcCCCEEEEEccChHHhcCCCeEeCCHHHHHHHHhCCCcccccCcCCCCCCH
Confidence 799999999999999999999998865 56789999999999999999999999999999999997 999999764 3
Q ss_pred CcHHHHHHHHHHcCCceEEEecCccchhhhhh-------h------cCCCccccCc---------hhHHHHHHHHHHHHH
Q psy5984 398 KKLPQIAAKLKELKIQALLIIGGFEDEQGHMQ-------Q------GGSPSPFDRN---------MGTKQAANTVEWMID 455 (512)
Q Consensus 398 ~~~~~i~~~l~~~~i~~LvviGGf~s~lGh~Q-------q------GG~PstiDr~---------lG~~tA~~ai~~l~~ 455 (512)
+.++++.+.|++++||+|++|||+||+.++.+ . .|+|+||||| +||+||++.+..+++
T Consensus 183 e~~~~~le~lkkl~Id~LVvIGGDgS~t~A~~LaEy~~~~g~~I~VIGIPKTIDNDL~g~~tD~S~GFdTA~k~iae~I~ 262 (1328)
T PTZ00468 183 EQMRASLEICEKLKLHGLVVIGGDDSNTNAAVLAEYFKRNSSSTVVVGCPKTIDGDLKNEVIETSFGYDTAVKTYSEQIG 262 (1328)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCchHHHHHHHHHHHHHhcCCCeeEEEEeEEEcCCCCCCcCCCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999866521 2 3899999995 699999999999999
Q ss_pred HHhhhcCC-CCceee------cCCCcEEEEEee-cCceeEeecc
Q psy5984 456 QLKKCTKP-DGSVFT------DSPETAVLMGVI-RRQYCFTPLQ 491 (512)
Q Consensus 456 ~l~~~a~s-~~rv~~------~~~~~a~vigl~-g~~~~~~Pl~ 491 (512)
++..++.+ +.|+|+ +++|+|..+|++ +.+++++|..
T Consensus 263 nl~~~A~S~~~rv~~VEVMGR~AGhLAL~~ALAtganiiLIPEe 306 (1328)
T PTZ00468 263 SIMDAIKTEGYGYYFVRLMGRSASHITLECGLQTRANMILIGEE 306 (1328)
T ss_pred HHHHHhhhcCCeEEEEEeCCcchHHHHHHHHHhcCCCEEEecCc
Confidence 99999865 678887 689999888886 7899999964
No 44
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=99.83 E-value=1.2e-20 Score=205.41 Aligned_cols=149 Identities=17% Similarity=0.121 Sum_probs=109.1
Q ss_pred cceEEEEeeCCCCCCchHHHHHHHH--hcCCcc---c-eeccccccCCcc--cceeeeecccccccCc-ccccCcchh-H
Q psy5984 194 GYTLAVMHIGAPACGMNAAVRSFCN--DNYNTD---F-IYRLYSEEGKGL--FSARQNVLGHMQQGGS-PSPFDRNMG-T 263 (512)
Q Consensus 194 ~~~iai~~~G~~a~GMNaa~ra~~~--~~~~~~---~-i~~~~~~~~~g~--~~~~~~V~G~~~rGGs-~~~~~R~~~-~ 263 (512)
.+||||+++||||||||++++++++ ...+.+ + +++||.|..++. ..+|..|.+|.+.||+ .+++.|... +
T Consensus 70 ~~~IgIl~sGG~aPG~N~vI~gv~~~~~~~~~~~~v~G~~~G~~GLl~~~~~~Lt~~~v~~~~~~GG~~~LGssR~k~~~ 149 (555)
T PRK07085 70 PLKVGVILSGGQAPGGHNVIAGLFDGLKKLNPDSKLFGFIGGPLGLLNGKYIEITEEVIDEYRNTGGFDMIGSGRTKIET 149 (555)
T ss_pred ceEEEEECCCCCChHHHHHHHHHHHHHHHhcCCCEEEEEecChHHhcCCCeEECCHHHHhHHHhCCChhhhcCCCCCCCC
Confidence 5899999999999999999999875 333333 2 677776554332 2367789999999998 899999643 2
Q ss_pred HHHH--------------------HHHHHHhHHHHHHhHhhhhcCCcccccccccccCCCCc--eeeccccCcccccccc
Q psy5984 264 KQAA--------------------NTAYQAGIQLVEARSDYKEFCIPMVVIPSTISNNVPGT--EFSLGCDTALNEITEE 321 (512)
Q Consensus 264 ~~~~--------------------~~~~~a~~~L~~a~~~y~~~~ipmv~iPatIsNnvpgt--e~slG~DTaln~~~~~ 321 (512)
.... ...+..+..|.+...+. ..+|++|+||+|||||+++| |+|+|+|||+|.+.+.
T Consensus 150 ~e~~~~i~~~l~~~~Id~LviIGGd~S~~~A~~Lae~~~~~-~~~i~VIGIPkTIDNDl~~~~id~s~GFdTA~~~~~~~ 228 (555)
T PRK07085 150 EEQKEACLETVKKLKLDGLVIIGGDDSNTNAAILAEYFAKH-GCKTQVIGVPKTIDGDLKNEFIETSFGFDTATKTYSEM 228 (555)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHHh-CCCccEEEEeeeecCCCCCCcccccCCHHHHHHHHHHH
Confidence 2211 22333444555543322 25899999999999999977 9999999998876554
Q ss_pred -----------cceEEEEecCCCcchhhHHHHH
Q psy5984 322 -----------GYTLAVMHIGAPACGMNAAVRS 343 (512)
Q Consensus 322 -----------~~~iaIi~sGg~apG~NAair~ 343 (512)
.+++.+++.-|-.+|--|.-.+
T Consensus 229 I~~i~~Da~s~~~~~~~VevMGR~aG~LAl~~a 261 (555)
T PRK07085 229 IGNISRDALSAKKYWHFIKLMGRSASHIALECA 261 (555)
T ss_pred HHHHHHHHHhcCCcEEEEEECCCChHHHHHHHH
Confidence 2578999998888888776544
No 45
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase. Diphosphate--fructose-6-phosphate 1-phosphotransferase catalyzes the addition of phosphate from diphosphate (PPi) to fructose 6-phosphate to give fructose 1,6-bisphosphate (EC 2.7.1.90). The enzyme is also known as pyrophosphate-dependent phosphofructokinase. The usage of PPi-dependent enzymes in glycolysis presumably frees up ATP for other processes. TIGR02482 represents the ATP-dependent 6-phosphofructokinase enzyme contained within Pfam pfam00365: Phosphofructokinase. This model hits primarily bacterial, plant alpha, and plant beta sequences.
Probab=99.79 E-value=2.4e-19 Score=194.86 Aligned_cols=151 Identities=15% Similarity=0.102 Sum_probs=106.6
Q ss_pred CcceEEEEeeCCCCCCchHHHHHHHHhcCC--cc---c-eeccccccCCccc--ceeeeecccccccCc-ccccCcchh-
Q psy5984 193 EGYTLAVMHIGAPACGMNAAVRSFCNDNYN--TD---F-IYRLYSEEGKGLF--SARQNVLGHMQQGGS-PSPFDRNMG- 262 (512)
Q Consensus 193 ~~~~iai~~~G~~a~GMNaa~ra~~~~~~~--~~---~-i~~~~~~~~~g~~--~~~~~V~G~~~rGGs-~~~~~R~~~- 262 (512)
+++||||+++||||||||++++++++.... .+ + +++||.|..++.+ .++..|.+|.+.||+ .+++.|...
T Consensus 66 ~~~rIgIl~sGG~aPG~N~vI~gv~~~~~~~~~~~~v~G~~~G~~GLl~~~~~~Lt~~~v~~~~~~GG~~~LGssR~k~~ 145 (539)
T TIGR02477 66 QPLKIGVILSGGQAPGGHNVISGLFDALKKLNPNSKLYGFIGGPLGLLDNNYVELTKELIDTYRNTGGFDIIGSGRTKIE 145 (539)
T ss_pred cceEEEEECCCCCChHHHHHHHHHHHHHHHhCCCcEEEEEecChHHhcCCCeEeCCHHHHhHHHhCCCchhhcCCCCCCC
Confidence 468999999999999999999998765332 22 2 6777765443322 356789999999997 799988642
Q ss_pred HHHHHHHH--------------------HHHhHHHHHHhHhhhhcCCcccccccccccCCCC--ceeeccccCccccccc
Q psy5984 263 TKQAANTA--------------------YQAGIQLVEARSDYKEFCIPMVVIPSTISNNVPG--TEFSLGCDTALNEITE 320 (512)
Q Consensus 263 ~~~~~~~~--------------------~~a~~~L~~a~~~y~~~~ipmv~iPatIsNnvpg--te~slG~DTaln~~~~ 320 (512)
+......+ +..+..|.+...+ ..+.|++|+||+|||||+++ ||+|+|+|||+|.+.+
T Consensus 146 ~~e~~~~~~~~l~~~~Id~LviIGGdgS~~~A~~Lae~~~~-~g~~i~VIGIPkTIDNDl~~~~td~s~GFdTA~~~~~~ 224 (539)
T TIGR02477 146 TEEQFAKALTTAKKLKLDGLVIIGGDDSNTNAALLAEYFAK-HGLKTQVIGVPKTIDGDLKNQFIETSFGFDTACKIYSE 224 (539)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHh-cCCCceEEEEeeeecCCCCCCCCCCCcCHHHHHHHHHH
Confidence 22222212 2223334332111 12469999999999999995 9999999999887665
Q ss_pred c-----------cceEEEEecCCCcchhhHHHHHH
Q psy5984 321 E-----------GYTLAVMHIGAPACGMNAAVRSF 344 (512)
Q Consensus 321 ~-----------~~~iaIi~sGg~apG~NAair~~ 344 (512)
. .+++.+++.-|-.+|--|+-.++
T Consensus 225 ~I~~i~~Da~s~~~~~~~VevMGR~aG~LAl~~aL 259 (539)
T TIGR02477 225 LIGNICRDALSAKKYWHFIRLMGRSASHIALECAL 259 (539)
T ss_pred HHHHHHHHHHhcCCcEEEEEECCCCcHHHHHHHHH
Confidence 5 25688899888888877764443
No 46
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=99.76 E-value=1.8e-18 Score=189.62 Aligned_cols=145 Identities=14% Similarity=0.062 Sum_probs=96.9
Q ss_pred cceEEEEeeCCCCCCchHHHHHHHHhcCCc--c----ceeccccccCCcc--cceeeeecccccccCc-ccccCcc-hhH
Q psy5984 194 GYTLAVMHIGAPACGMNAAVRSFCNDNYNT--D----FIYRLYSEEGKGL--FSARQNVLGHMQQGGS-PSPFDRN-MGT 263 (512)
Q Consensus 194 ~~~iai~~~G~~a~GMNaa~ra~~~~~~~~--~----~i~~~~~~~~~g~--~~~~~~V~G~~~rGGs-~~~~~R~-~~~ 263 (512)
.+|||||++||||||||++++++++..... + .+++||.|...+. ..++..|.+|.+.||+ .+++.|. +.+
T Consensus 79 ~~rIgIv~sGG~APG~nnvI~Gvv~~~~~~~~~~~V~G~~~G~~GLl~~~~v~Lt~~~v~~~~n~GG~~iLGSsR~~l~~ 158 (610)
T PLN03028 79 AVRVGVVFCGRQSPGGHNVIWGLHDALKAHNPNSVLLGFLGGTEGLFAQKTLEITDDVLSTYKNQGGYDLLGRTKDQIRT 158 (610)
T ss_pred ccEEEEEccCCCCccHHHHHHHHHHHHHHhCCCcEEEEEccCHHHhcCCCeEECCHHHHHHHHhcCCchhccCcCCCcCC
Confidence 589999999999999999999988764332 2 2666775443332 1356779999999999 5787773 222
Q ss_pred HHHHHHH--------------------HHHhHHHHHHhHhhhhcCCcccccccccccCCC--CceeeccccCcccccccc
Q psy5984 264 KQAANTA--------------------YQAGIQLVEARSDYKEFCIPMVVIPSTISNNVP--GTEFSLGCDTALNEITEE 321 (512)
Q Consensus 264 ~~~~~~~--------------------~~a~~~L~~a~~~y~~~~ipmv~iPatIsNnvp--gte~slG~DTaln~~~~~ 321 (512)
......+ +..+..|.+...+.. .+|++|+||+|||||++ +||+|+|+|||.|.+.+.
T Consensus 159 ~e~~~~i~e~l~~l~Id~LvvIGGddS~~~A~~Lae~~~~~~-~~i~VIGIPKTIDNDL~~~~td~s~GFdTA~k~~ae~ 237 (610)
T PLN03028 159 TEQVNAALAACEALKLDGLVIIGGVTSNTDAAQLAETFAEAK-CKTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQL 237 (610)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHHcC-CCceEEEeceeeeCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 2222222 222333443322111 27999999999999998 799999999999987665
Q ss_pred c-----------ceEEEEecCCCcchhhH
Q psy5984 322 G-----------YTLAVMHIGAPACGMNA 339 (512)
Q Consensus 322 ~-----------~~iaIi~sGg~apG~NA 339 (512)
. +++.+++.-|-.+|--|
T Consensus 238 I~ni~~dA~S~~~~~~~VevMGR~aG~LA 266 (610)
T PLN03028 238 ISNVCTDALSAEKYYYFIRLMGRKASHVA 266 (610)
T ss_pred HHHHHHHHHhhCCeEEEEEeCCcchHHHH
Confidence 2 34555555554444443
No 47
>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include pyrophosphate-dependent phosphofructokinases. These are found in bacteria as well as plants. These may be dimeric nonallosteric enzymes as in bacteria or allosteric heterotetramers as in plants.
Probab=99.75 E-value=4.1e-18 Score=185.06 Aligned_cols=148 Identities=16% Similarity=0.084 Sum_probs=103.4
Q ss_pred CcceEEEEeeCCCCCCchHHHHHHHHhcCC--cc---c-eeccccccCCcc--cceeeeecccccccCc-ccccCcchh-
Q psy5984 193 EGYTLAVMHIGAPACGMNAAVRSFCNDNYN--TD---F-IYRLYSEEGKGL--FSARQNVLGHMQQGGS-PSPFDRNMG- 262 (512)
Q Consensus 193 ~~~~iai~~~G~~a~GMNaa~ra~~~~~~~--~~---~-i~~~~~~~~~g~--~~~~~~V~G~~~rGGs-~~~~~R~~~- 262 (512)
..+||||+++||||||||++++++++.... .+ + +++||.|..++. ..++.+|.+|.+.||+ .+++.|.-.
T Consensus 71 ~~~~IgIl~SGG~aPGiNnvI~gv~~~~~~~~~~~~v~G~~~G~~GLl~~~~i~Lt~~~v~~~~~~GGsd~LGs~R~k~~ 150 (550)
T cd00765 71 PKLKIGIVLSGGQAPGGHNVISGLFDYLKERAKGSTLYGFKGGPAGILKCDYIELNAEYIQPYRNTGGFDMICSGRTKIE 150 (550)
T ss_pred CCCEEEEECCCCCcHhHHHHHHHHHHHHHHhcCCcEEEEEccCHHHhcCCCeEECCHHHHhHHHhCCChhhhcCcCCCCC
Confidence 358999999999999999999998865432 22 2 667776543332 2356789999999999 789988532
Q ss_pred HHHHH---HH-----------------HHHHhHHHHHHhHhhhhcCCcccccccccccCCCCc--eeeccccCccccccc
Q psy5984 263 TKQAA---NT-----------------AYQAGIQLVEARSDYKEFCIPMVVIPSTISNNVPGT--EFSLGCDTALNEITE 320 (512)
Q Consensus 263 ~~~~~---~~-----------------~~~a~~~L~~a~~~y~~~~ipmv~iPatIsNnvpgt--e~slG~DTaln~~~~ 320 (512)
+.... .+ .+..+..|.+...+ ...+|++|+||+|||||+++| |+|+|+|||+|.+.+
T Consensus 151 ~~e~~~~i~~~l~~~~Id~LviIGGddS~~~A~~Lae~~~~-~g~~i~VIGVPKTIDNDl~~t~id~s~GFdTA~k~~a~ 229 (550)
T cd00765 151 TEDQFKQAEETAKKLDLDALVVIGGDDSNTNAALLAENFRS-KGLKTRVIGVPKTIDGDLKNKEIETSFGFDTATKIYSE 229 (550)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHh-cCCCceEEEEeeeecCCCCCCCCCCCcCHHHHHHHHHH
Confidence 11111 11 22233334432211 124699999999999999996 999999999887665
Q ss_pred c-----------cceEEEEecCCCcchhhHHH
Q psy5984 321 E-----------GYTLAVMHIGAPACGMNAAV 341 (512)
Q Consensus 321 ~-----------~~~iaIi~sGg~apG~NAai 341 (512)
. .++..|++.-|-.+|--|+-
T Consensus 230 ~I~ni~~Da~s~~~~~~~VEvMGR~aG~LAl~ 261 (550)
T cd00765 230 LIGNVMRDARSTGKYWHFVKLMGRSASHIALE 261 (550)
T ss_pred HHHHHHHHHHHcCCcEEEEEeCCCchHHHHHH
Confidence 5 24666888888888877664
No 48
>PLN02251 pyrophosphate-dependent phosphofructokinase
Probab=99.59 E-value=7.6e-15 Score=160.06 Aligned_cols=129 Identities=16% Similarity=0.168 Sum_probs=101.5
Q ss_pred CEEEeCCCccCc-----ccccccccCCchhhHHHHHHHcCCCcEEEEEeCCC----------------------------
Q psy5984 1 TWPFQPLWPRKQ-----ILCSPLNGLPKSTGRLACERTAGQRLNIIIVAEGA---------------------------- 47 (512)
Q Consensus 1 d~iliPE~p~~~-----~~~~~~~~~~~~~~~i~~~~~~gk~~~iIvVAEG~---------------------------- 47 (512)
|+|||||.+++. ++++.+. +.|.+++.+||+++||||+||+
T Consensus 293 niilIpEe~~~~~~~L~~I~~~I~------~~I~~R~~~gk~~gvIlVsEGlie~ipe~~~li~el~~~l~~~~~~~~~~ 366 (568)
T PLN02251 293 NITIIGEEVAAKKLTLKNVTDYIV------DVICKRAELGYNYGVILIPEGLIDFIPEVQHLIAELNEILAHDVVDEEGH 366 (568)
T ss_pred CEEEecCccccccCCHHHHHHHHH------HHHHHHHHcCCCcEEEEEeCCchhhCchHHHHHHHHHHHhhhcccccchh
Confidence 689999997663 2233111 1788888899999999999999
Q ss_pred ---------------------------ccCCCCcc-----cHHHHHHHHHHhcCC-----------ceeEEeCCccccCC
Q psy5984 48 ---------------------------IDRDGKPI-----TAEKVKEVVVENLKQ-----------DTRITVLGHVQRGG 84 (512)
Q Consensus 48 ---------------------------~d~~g~~i-----~~~~l~~~i~~~~g~-----------~~R~t~LGh~QRgG 84 (512)
+|.+|++- +.+.|++.++++++. .+|...+||.|||+
T Consensus 367 ~~~~ls~~~~~lf~~lP~~i~~qll~~rD~~G~~qls~Iete~lL~~lV~~~L~~rk~~~~~~~~f~~~~h~~GYe~Rca 446 (568)
T PLN02251 367 WKKKLKPQSLQLFDFLPHAIQEQLMLERDPHGNVQVAKIETEKMLIQMVETELEKRKQEGSYKGHFKGQSHFFGYEGRCG 446 (568)
T ss_pred hhhhCCHHHHHHHHhCcHHHHHHhccccCCCCCeeecccHHHHHHHHHHHHHHhhhccccccccccceeEEecCchhhcc
Confidence 24455532 245566666665543 68889999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCC-------eeEEechHHHHhhccc
Q psy5984 85 SPSAFDRVLGCRMGAEAVMALMEATPGTEPCVMSLDGN-------QAVRLPLMECVEKTKA 138 (512)
Q Consensus 85 ~Psa~Dr~la~~~G~~AV~~l~~g~~~~~~~mv~i~~~-------~i~~vpl~e~~~~~k~ 138 (512)
.||.||..+|+.+|..|++++++|.+ |+|+++++- ++.-+||..+++.+|.
T Consensus 447 ~PS~fD~~yay~LG~~A~~li~~G~t---GyM~~I~nl~~~~~~w~~~~vpl~~~mn~e~~ 504 (568)
T PLN02251 447 LPTNFDATYCYALGYGAGALLHSGKT---GLISSVGNLAAPVEEWTVGGTALTSLMDVERR 504 (568)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHcCCC---CEEEEEEcCCCCcceeEEcCccHHHHhhhhhh
Confidence 99999999999999999999999998 699999983 5567899999886654
No 49
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=55.88 E-value=86 Score=30.55 Aligned_cols=92 Identities=20% Similarity=0.334 Sum_probs=56.6
Q ss_pred ceEEEEecCCCcchhhHHHHHHHHHHHHcCCEEEEEecch------hhh--cccceEecCh--hccccccccCCceeecc
Q psy5984 323 YTLAVMHIGAPACGMNAAVRSFVRNCIYRGDTVIGIHDGV------EGL--VAGNVQIMQW--SDVTGWVGQGGAMLGTK 392 (512)
Q Consensus 323 ~~iaIi~sGg~apG~NAair~~v~~~~~~G~~v~g~~~G~------~GL--~~g~~~~l~~--~~v~~~~~~GGsiLgt~ 392 (512)
++|||+-..| .+=.-+..++..+||+|-++-.-- .|+ ...|+.+++. +++.+.. .++-.-
T Consensus 1 mKIaiIgAsG------~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~D----aVIsA~ 70 (211)
T COG2910 1 MKIAIIGASG------KAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHD----AVISAF 70 (211)
T ss_pred CeEEEEecCc------hhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCc----eEEEec
Confidence 4789998887 344667788999999999875432 222 2344444444 4443321 011111
Q ss_pred cCC-CC------CcHHHHHHHHHHcCCceEEEecCccch
Q psy5984 393 RTL-PE------KKLPQIAAKLKELKIQALLIIGGFEDE 424 (512)
Q Consensus 393 R~~-p~------~~~~~i~~~l~~~~i~~LvviGGf~s~ 424 (512)
+.. +. +..+.+.+.++.-+...|+++||-+|.
T Consensus 71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL 109 (211)
T COG2910 71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGSL 109 (211)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccce
Confidence 111 11 235667788888789999999999985
No 50
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=43.27 E-value=71 Score=34.65 Aligned_cols=26 Identities=23% Similarity=0.281 Sum_probs=21.7
Q ss_pred cceEEEEeeCCCCCCchHHHHHHHHh
Q psy5984 194 GYTLAVMHIGAPACGMNAAVRSFCND 219 (512)
Q Consensus 194 ~~~iai~~~G~~a~GMNaa~ra~~~~ 219 (512)
+..+-|+..+--|.|||.|+.+.+..
T Consensus 125 k~~vyIv~t~~sa~gmr~al~~ma~l 150 (431)
T TIGR01918 125 KKDVYVMITGDSAAGMRKDLPAMAKF 150 (431)
T ss_pred hhCcEEEECCcchhhHHHHHHHHHHH
Confidence 35788999999999999999986543
No 51
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=41.70 E-value=96 Score=33.70 Aligned_cols=26 Identities=19% Similarity=0.233 Sum_probs=22.0
Q ss_pred cceEEEEeeCCCCCCchHHHHHHHHh
Q psy5984 194 GYTLAVMHIGAPACGMNAAVRSFCND 219 (512)
Q Consensus 194 ~~~iai~~~G~~a~GMNaa~ra~~~~ 219 (512)
+.++-|+..+--|.|||.|+.+.+..
T Consensus 125 k~~vyIv~t~~sa~gmr~al~~ma~l 150 (431)
T TIGR01917 125 KKEVYVIPTADSAAGMRKALPALAKF 150 (431)
T ss_pred hhCcEEEECCCchhhHHHHHHHHHHH
Confidence 45789999999999999999986543
No 52
>PF04198 Sugar-bind: Putative sugar-binding domain; InterPro: IPR007324 This probable domain is found in bacterial transcriptional regulators such as DeoR and SorC. One of these proteins, Q8U7I7 from SWISSPROT, has an N-terminal helix-turn-helix IPR000792 from INTERPRO that binds to DNA. This domain is probably the ligand regulator binding region. SorC is regulated by sorbose and other members of this family are likely to be regulated by other sugar substrates.; GO: 0030246 carbohydrate binding; PDB: 3KV1_A 3EFB_C 2W48_A 3BXH_A 3BXE_A 2OKG_A 3BXF_A 3BXG_A 2R5F_A 2O0M_A ....
Probab=39.49 E-value=32 Score=34.50 Aligned_cols=141 Identities=19% Similarity=0.233 Sum_probs=78.2
Q ss_pred HHHHHHHHHHhcCCceeEEeCCccccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCC--------------
Q psy5984 57 AEKVKEVVVENLKQDTRITVLGHVQRGGSPSAFDRVLGCRMGAEAVMALMEATPGTEPCVMSLDGN-------------- 122 (512)
Q Consensus 57 ~~~l~~~i~~~~g~~~R~t~LGh~QRgG~Psa~Dr~la~~~G~~AV~~l~~g~~~~~~~mv~i~~~-------------- 122 (512)
..+|.+.|++++|++-=.++++.- .. ...-..+|..|.+.+.+--.. +..||+..|
T Consensus 6 ~~~Le~~L~~~fgLk~~~Vv~~~~------~~--~~~~~~l~~~aA~~L~~~l~~--~~~iGv~wG~Tl~~~~~~l~~~~ 75 (255)
T PF04198_consen 6 NSELEEELKEKFGLKEVIVVPSPS------DD--EDILESLGEAAAEYLSELLKD--GDVIGVGWGRTLYAVANHLPPKS 75 (255)
T ss_dssp HHHHHHHHHHHHTSSEEEEESSST------TT--HHHHHHHHHHHHHHHHHH--T--TEEEEE-TSHHHHHHHHTS--SS
T ss_pred HHHHHHHHHHHhCCCEEEEecCCC------Ch--HHHHHHHHHHHHHHHHHhCCC--CCEEEEcchHHHHHHHHhcCccC
Confidence 458899999999986544454322 11 444667888998888775442 678999876
Q ss_pred --eeEEechHHHHhhcccchHhhhHHHHHHHHHhcCCC-CCCCccccchHHhhhhhhccCCCCCCcccccCCCCcceEEE
Q psy5984 123 --QAVRLPLMECVEKTKAVAKAMADKQWDLAVQLRGRQ-VFPHPSFARNLETYKMLTRLKPPKSAFDEMGRGLEGYTLAV 199 (512)
Q Consensus 123 --~i~~vpl~e~~~~~k~v~~~~~~~~~~~a~~l~g~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iai 199 (512)
.+..+||.=.+....... ...--...|..+-|.. .+|.|-|.++.+....+-.-..-...... .++..|||
T Consensus 76 ~~~~~vV~l~Gg~~~~~~~~--~~~i~~~lA~~~g~~~~~l~aP~~~~s~~~~~~l~~~~~i~~~l~~----~~~~dial 149 (255)
T PF04198_consen 76 LPNVTVVPLIGGVGNSNSYQ--ANEIARRLAEKLGGKYYFLPAPAFVDSPELRDALLAEPSIREVLDL----ARKADIAL 149 (255)
T ss_dssp SSCEEEEESBSBTTTSSGGS--HHHHHHHHHHHHTSEEE---SBSB-SSHHHHHHHHTSHHHHHHHHH----HCT-SEEE
T ss_pred CCCcEEEECCCCCCCCCCcC--HHHHHHHHHHHhCCcEEEEeCCccCCCHHHHHHHHhChHHHHHHHH----HHhCCEEE
Confidence 344455544443321111 1122234455555543 37888998888887665432111111111 14689999
Q ss_pred EeeCCCCCCchHHHH
Q psy5984 200 MHIGAPACGMNAAVR 214 (512)
Q Consensus 200 ~~~G~~a~GMNaa~r 214 (512)
+-+|.+.+ ++...+
T Consensus 150 ~giG~~~~-~~~~~~ 163 (255)
T PF04198_consen 150 VGIGSPSS-DSTLYR 163 (255)
T ss_dssp EEEEEHHH-HHHHCH
T ss_pred EecCCCCC-cchHHH
Confidence 99999988 555444
No 53
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=31.60 E-value=45 Score=33.80 Aligned_cols=30 Identities=20% Similarity=0.238 Sum_probs=21.4
Q ss_pred HHHHHHHHHcCC-----ceEEEecCccchhhhhhh
Q psy5984 401 PQIAAKLKELKI-----QALLIIGGFEDEQGHMQQ 430 (512)
Q Consensus 401 ~~i~~~l~~~~i-----~~LvviGGf~s~lGh~Qq 430 (512)
+++.+.++..++ |.++++||||++|...+.
T Consensus 18 ~~l~~~~~~~~~~~~~~D~vi~iGGDGT~L~a~~~ 52 (259)
T PRK00561 18 PKLKKVLKKKLAVEDGADYLFVLGGDGFFVSTAAN 52 (259)
T ss_pred HHHHHHHhhCCCccCCCCEEEEECCcHHHHHHHHH
Confidence 344445544444 899999999999987654
No 54
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=27.48 E-value=73 Score=32.09 Aligned_cols=48 Identities=17% Similarity=0.378 Sum_probs=28.3
Q ss_pred CCceEEEecCccchhhhhhhcCCCc-cc-cCchhHHHHHH--HHHHHHHHHh
Q psy5984 411 KIQALLIIGGFEDEQGHMQQGGSPS-PF-DRNMGTKQAAN--TVEWMIDQLK 458 (512)
Q Consensus 411 ~i~~LvviGGf~s~lGh~QqGG~Ps-ti-Dr~lG~~tA~~--ai~~l~~~l~ 458 (512)
+.|.++++||||++|...++-++|= .| --.+||-+... .+..+++++.
T Consensus 41 ~~d~vi~iGGDGT~L~a~~~~~~Pilgin~G~lGfl~~~~~~~~~~~l~~~~ 92 (256)
T PRK14075 41 TADLIIVVGGDGTVLKAAKKVGTPLVGFKAGRLGFLSSYTLEEIDRFLEDLK 92 (256)
T ss_pred CCCEEEEECCcHHHHHHHHHcCCCEEEEeCCCCccccccCHHHHHHHHHHHH
Confidence 4588999999999988877553330 01 11356655433 3344444443
No 55
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=25.71 E-value=74 Score=31.99 Aligned_cols=18 Identities=11% Similarity=0.217 Sum_probs=15.7
Q ss_pred ceEEEecCccchhhhhhh
Q psy5984 413 QALLIIGGFEDEQGHMQQ 430 (512)
Q Consensus 413 ~~LvviGGf~s~lGh~Qq 430 (512)
|.++++||||++|...++
T Consensus 27 Dlvi~iGGDGTlL~a~~~ 44 (246)
T PRK04761 27 DVIVALGGDGFMLQTLHR 44 (246)
T ss_pred CEEEEECCCHHHHHHHHH
Confidence 999999999999887654
No 56
>KOG2336|consensus
Probab=25.25 E-value=5.6e+02 Score=26.64 Aligned_cols=81 Identities=19% Similarity=0.250 Sum_probs=47.8
Q ss_pred cHHHHHHHHHHcCCceEEE--------ecCccchhhhhhhcCC-C-ccccC------chhHHHHHHHHHHHHHHH-----
Q psy5984 399 KLPQIAAKLKELKIQALLI--------IGGFEDEQGHMQQGGS-P-SPFDR------NMGTKQAANTVEWMIDQL----- 457 (512)
Q Consensus 399 ~~~~i~~~l~~~~i~~Lvv--------iGGf~s~lGh~QqGG~-P-stiDr------~lG~~tA~~ai~~l~~~l----- 457 (512)
..+.....|.+-+-|.++- +-+|+++...+.+|+. | +|+|- +|-+|+|++..-.-+.+.
T Consensus 136 Kv~AA~~TL~~iNPDV~iE~hn~NITTvenFd~F~~~is~g~~~~gkpvDLVLSCVDNfEARMavN~ACNE~~q~WmESG 215 (422)
T KOG2336|consen 136 KVDAAVQTLAEINPDVVIEVHNYNITTVENFDTFTDRISNGSLCPGKPVDLVLSCVDNFEARMAVNQACNELNQTWMESG 215 (422)
T ss_pred HHHHHHHHHHhcCCCeEEEEeecceeeehhHHHHHHHhhcCCCCCCCcceEEeeehhhHHHHHHHHHHHHHhhhHHHHcc
Confidence 3566667777666554432 3688888888887753 2 44665 367788877544333333
Q ss_pred -hhhcCCCCceeecCCCcEEEEE
Q psy5984 458 -KKCTKPDGSVFTDSPETAVLMG 479 (512)
Q Consensus 458 -~~~a~s~~rv~~~~~~~a~vig 479 (512)
.+.|.|..--|+.-|++||+++
T Consensus 216 VSEnAVSGHIQ~i~PGetACFAC 238 (422)
T KOG2336|consen 216 VSENAVSGHIQLIVPGETACFAC 238 (422)
T ss_pred CccccccceeEEecCCccceecc
Confidence 3333333344666677777654
No 57
>COG2390 DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
Probab=24.78 E-value=2.5e+02 Score=29.38 Aligned_cols=137 Identities=19% Similarity=0.175 Sum_probs=78.5
Q ss_pred HHHHHHHHHHhcCCceeEEeCCccccCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCC--------------
Q psy5984 57 AEKVKEVVVENLKQDTRITVLGHVQRGGSPSAFDRVLGCRMGAEAVMALMEATPGTEPCVMSLDGN-------------- 122 (512)
Q Consensus 57 ~~~l~~~i~~~~g~~~R~t~LGh~QRgG~Psa~Dr~la~~~G~~AV~~l~~g~~~~~~~mv~i~~~-------------- 122 (512)
.-+|.+.|++++|++==.++++.-. ..|..+ .++|..|.+.+.+--.. +-+||+-.|
T Consensus 67 ~~~Le~~L~~~fgL~~a~VVp~~~~------~~~~~~-~~lg~aaA~~l~~~l~~--gdvigV~wGrTv~a~~~~l~~~~ 137 (321)
T COG2390 67 CLELEQQLKERFGLKEAIVVPSDSD------ADDSIL-RRLGRAAAQYLESLLKP--GDVIGVGWGRTLSAVVDNLPPAP 137 (321)
T ss_pred hHHHHHHHHHhcCCCeEEEEcCCCC------CchHHH-HHHHHHHHHHHHHhCCC--CCEEEEeccHHHHHHHHhcCcCc
Confidence 4579999999999986677776211 122222 22888888888775542 568888876
Q ss_pred --eeEEechHHHHhhcccchHhhhHHHHHHHHHhcCCC-CCCCccccchHHhhhhhhccCCCCCCcccccCCCCcceEEE
Q psy5984 123 --QAVRLPLMECVEKTKAVAKAMADKQWDLAVQLRGRQ-VFPHPSFARNLETYKMLTRLKPPKSAFDEMGRGLEGYTLAV 199 (512)
Q Consensus 123 --~i~~vpl~e~~~~~k~v~~~~~~~~~~~a~~l~g~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iai 199 (512)
++..|||.=-+.. ....-.-..--+..|.++.|.- ++|-|-|.++-+.=..+..-..-..... ..+...+||
T Consensus 138 ~~~~~vV~l~GG~~~-~~~~~~~~~~~~~~A~k~~~~~~~l~aP~~~~s~e~r~~l~~e~~v~~vl~----~~~~ad~al 212 (321)
T COG2390 138 LRDVKVVQLTGGVGH-ADGSYNANTIALRLAEKLGAESYLLPAPLVASSPELREALLQEPSVREVLD----LARSADLAL 212 (321)
T ss_pred cCCeEEEECCCCCCC-CccccCHHHHHHHHHHHhCCcEEeeecCccCCCHHHHHHHHhCcHHHHHHH----HHHhCCEEE
Confidence 2333444333331 0111112334566677777763 3777888887766555542210011111 124678999
Q ss_pred EeeCCCCC
Q psy5984 200 MHIGAPAC 207 (512)
Q Consensus 200 ~~~G~~a~ 207 (512)
+-+|.+.+
T Consensus 213 vGIG~~~~ 220 (321)
T COG2390 213 VGIGSLSA 220 (321)
T ss_pred EecCCCcc
Confidence 99998764
No 58
>cd07995 TPK Thiamine pyrophosphokinase. Thiamine pyrophosphokinase (TPK, EC:2.7.6.2, also spelled thiamin pyrophosphokinase) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamine) to form the coenzyme thiamine pyrophosphate (TPP). TPP is required for central metabolic functions, and thiamine deficiency is associated with potentially fatal human diseases. The structure of thiamine pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis.
Probab=24.32 E-value=2.8e+02 Score=26.69 Aligned_cols=75 Identities=13% Similarity=0.184 Sum_probs=45.8
Q ss_pred CEEEEEecchhhhc---------ccceEecChhccccccccCCceeecccCCCCCcHHHHHHHHHHcCCceEEEecCccc
Q psy5984 353 DTVIGIHDGVEGLV---------AGNVQIMQWSDVTGWVGQGGAMLGTKRTLPEKKLPQIAAKLKELKIQALLIIGGFED 423 (512)
Q Consensus 353 ~~v~g~~~G~~GL~---------~g~~~~l~~~~v~~~~~~GGsiLgt~R~~p~~~~~~i~~~l~~~~i~~LvviGGf~s 423 (512)
..++++-.|..=|. -||+..++.+..+.+...+-.+......+...+++...+.+.+.+.+-++++|+.|.
T Consensus 23 ~~~i~aDgGa~~l~~~gi~Pd~iiGDfDSi~~~~~~~~~~~~~~~~~~p~~KD~TD~e~Al~~~~~~~~~~i~i~Ga~Gg 102 (208)
T cd07995 23 DLIIAADGGANHLLDLGIVPDLIIGDFDSISPEVLEYYKSKGVEIIHFPDEKDFTDFEKALKLALERGADEIVILGATGG 102 (208)
T ss_pred CEEEEEChHHHHHHHcCCCCCEEEecCcCCCHHHHHHHHhcCCeEEECCCCCCCCHHHHHHHHHHHcCCCEEEEEccCCC
Confidence 34566666654333 355555555544444444333442222222346888888888888889999999998
Q ss_pred hhhh
Q psy5984 424 EQGH 427 (512)
Q Consensus 424 ~lGh 427 (512)
.+-|
T Consensus 103 R~DH 106 (208)
T cd07995 103 RLDH 106 (208)
T ss_pred cHHH
Confidence 7777
Done!