Query psy5985
Match_columns 153
No_of_seqs 157 out of 1165
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 23:38:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5985.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5985hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zxx_A 6-phosphofructokinase; 100.0 1.3E-43 4.3E-48 299.6 14.1 134 1-142 67-259 (319)
2 1pfk_A Phosphofructokinase; tr 100.0 9.9E-44 3.4E-48 300.3 12.7 134 1-142 68-260 (320)
3 3o8l_A 6-phosphofructokinase, 100.0 8.3E-43 2.8E-47 320.8 15.7 142 1-142 466-671 (762)
4 4a3s_A 6-phosphofructokinase; 100.0 1.5E-41 5.2E-46 286.7 12.7 134 1-142 67-259 (319)
5 3opy_A 6-phosphofructo-1-kinas 100.0 8.1E-41 2.8E-45 312.1 14.7 142 1-142 665-874 (989)
6 3o8o_B 6-phosphofructokinase s 100.0 1.2E-40 4.2E-45 306.6 14.7 142 1-142 460-670 (766)
7 3o8o_A 6-phosphofructokinase s 100.0 2.3E-40 7.8E-45 305.2 16.0 142 1-142 460-669 (787)
8 3opy_B 6-phosphofructo-1-kinas 100.0 2.2E-40 7.5E-45 309.1 15.2 142 1-142 638-848 (941)
9 3o8o_B 6-phosphofructokinase s 100.0 9.7E-40 3.3E-44 300.6 14.0 140 1-142 72-298 (766)
10 3hno_A Pyrophosphate-dependent 100.0 7.4E-40 2.5E-44 285.0 10.6 135 1-141 75-308 (419)
11 3opy_B 6-phosphofructo-1-kinas 100.0 4.1E-39 1.4E-43 300.5 13.2 140 1-142 250-476 (941)
12 3o8o_A 6-phosphofructokinase s 100.0 5.8E-39 2E-43 295.9 11.3 139 1-142 73-298 (787)
13 3o8l_A 6-phosphofructokinase, 100.0 5.3E-39 1.8E-43 295.6 9.9 137 1-142 83-308 (762)
14 3opy_A 6-phosphofructo-1-kinas 100.0 2.5E-38 8.6E-43 295.4 14.0 139 1-142 278-503 (989)
15 2hig_A 6-phospho-1-fructokinas 100.0 5.3E-38 1.8E-42 277.3 13.1 136 1-142 168-390 (487)
16 2f48_A Diphosphate--fructose-6 100.0 3.7E-36 1.3E-40 269.2 9.0 104 1-104 141-316 (555)
17 2an1_A Putative kinase; struct 85.5 0.095 3.3E-06 42.1 -1.4 14 24-37 63-76 (292)
18 2i2c_A Probable inorganic poly 85.1 0.25 8.6E-06 39.6 1.0 26 12-37 16-48 (272)
19 1z0s_A Probable inorganic poly 79.6 0.6 2.1E-05 38.1 1.3 25 13-37 42-81 (278)
20 2bon_A Lipid kinase; DAG kinas 78.8 0.73 2.5E-05 37.6 1.6 25 13-37 71-95 (332)
21 2qv7_A Diacylglycerol kinase D 76.3 0.81 2.8E-05 37.3 1.1 25 13-37 69-93 (337)
22 1u0t_A Inorganic polyphosphate 74.4 0.57 2E-05 38.1 -0.3 16 22-37 73-88 (307)
23 2o6l_A UDP-glucuronosyltransfe 72.9 7.5 0.00026 27.4 5.6 54 11-69 38-115 (170)
24 4amg_A Snogd; transferase, pol 71.8 8.3 0.00028 30.7 6.1 54 10-68 254-332 (400)
25 3s40_A Diacylglycerol kinase; 71.2 1.3 4.3E-05 35.7 1.1 25 12-37 52-76 (304)
26 1yt5_A Inorganic polyphosphate 66.9 1.1 3.9E-05 35.4 -0.1 15 23-37 40-54 (258)
27 3pfn_A NAD kinase; structural 64.0 2.4 8.1E-05 35.9 1.4 15 23-37 107-121 (365)
28 2iya_A OLEI, oleandomycin glyc 58.8 17 0.00058 29.4 5.7 54 11-69 271-350 (424)
29 3afo_A NADH kinase POS5; alpha 57.6 1.6 5.5E-05 37.1 -0.8 15 23-37 113-127 (388)
30 2h6r_A Triosephosphate isomera 51.9 17 0.00057 27.9 4.3 54 43-100 65-120 (219)
31 1rrv_A Glycosyltransferase GTF 49.7 45 0.0015 26.8 6.8 53 11-68 254-330 (416)
32 3hbf_A Flavonoid 3-O-glucosylt 46.8 25 0.00086 30.0 5.0 59 10-68 288-373 (454)
33 3flu_A DHDPS, dihydrodipicolin 46.3 1.1E+02 0.0037 24.3 8.9 100 11-115 28-158 (297)
34 2c1x_A UDP-glucose flavonoid 3 46.0 30 0.001 29.0 5.3 58 11-68 287-371 (456)
35 4fzr_A SSFS6; structural genom 45.9 77 0.0026 25.1 7.6 54 10-68 250-328 (398)
36 1iir_A Glycosyltransferase GTF 45.9 30 0.001 27.9 5.2 53 11-68 253-329 (415)
37 3h4t_A Glycosyltransferase GTF 45.0 59 0.002 26.2 6.8 60 9-68 234-312 (404)
38 3l21_A DHDPS, dihydrodipicolin 43.3 1.2E+02 0.0042 24.2 8.4 100 11-115 36-166 (304)
39 3oti_A CALG3; calicheamicin, T 42.5 43 0.0015 26.7 5.5 53 11-68 250-327 (398)
40 2yjn_A ERYCIII, glycosyltransf 42.4 23 0.00078 29.0 3.9 53 11-68 286-363 (441)
41 2yxg_A DHDPS, dihydrodipicolin 41.7 1.3E+02 0.0044 23.7 9.1 100 11-115 21-151 (289)
42 2r8w_A AGR_C_1641P; APC7498, d 41.6 1.4E+02 0.0048 24.2 9.3 100 11-115 55-185 (332)
43 1xky_A Dihydrodipicolinate syn 41.6 1.3E+02 0.0045 23.9 8.7 100 11-115 33-163 (301)
44 2pq6_A UDP-glucuronosyl/UDP-gl 41.5 38 0.0013 28.4 5.3 58 11-68 311-399 (482)
45 4esy_A CBS domain containing m 40.8 53 0.0018 23.0 5.3 32 10-41 34-65 (170)
46 3daq_A DHDPS, dihydrodipicolin 40.6 1.2E+02 0.004 24.0 7.9 100 11-115 23-153 (292)
47 3tak_A DHDPS, dihydrodipicolin 39.6 1.4E+02 0.0047 23.6 8.5 100 11-115 22-152 (291)
48 3fkr_A L-2-keto-3-deoxyarabona 39.2 1.1E+02 0.0039 24.4 7.6 101 11-116 29-162 (309)
49 1cz3_A Dihydrofolate reductase 38.5 28 0.00095 25.1 3.5 24 12-35 81-104 (168)
50 3si9_A DHDPS, dihydrodipicolin 38.2 1.3E+02 0.0045 24.2 7.8 101 11-116 43-174 (315)
51 3dz1_A Dihydrodipicolinate syn 37.2 1.6E+02 0.0054 23.5 8.4 103 11-116 29-160 (313)
52 3apt_A Methylenetetrahydrofola 36.7 24 0.00082 28.7 3.1 32 4-35 79-110 (310)
53 2nq2_C Hypothetical ABC transp 36.4 97 0.0033 23.9 6.6 80 13-99 106-186 (253)
54 3jtw_A Dihydrofolate reductase 36.1 27 0.00093 25.6 3.1 25 11-35 96-120 (178)
55 3b4u_A Dihydrodipicolinate syn 36.1 1.6E+02 0.0055 23.3 9.0 103 11-115 24-158 (294)
56 2iyf_A OLED, oleandomycin glyc 36.0 43 0.0015 26.8 4.6 53 11-68 248-327 (430)
57 3qze_A DHDPS, dihydrodipicolin 35.8 1.5E+02 0.0052 23.8 7.9 100 11-115 44-174 (314)
58 3fst_A 5,10-methylenetetrahydr 35.3 26 0.0009 28.5 3.2 33 4-36 90-122 (304)
59 3d0c_A Dihydrodipicolinate syn 35.2 1.2E+02 0.0041 24.4 7.1 98 11-115 33-158 (314)
60 2qai_A V-type ATP synthase sub 35.2 51 0.0017 23.0 4.3 39 59-101 18-57 (111)
61 3na8_A Putative dihydrodipicol 34.9 1.2E+02 0.0043 24.3 7.2 101 11-116 45-176 (315)
62 2pcj_A ABC transporter, lipopr 34.3 88 0.003 23.5 5.9 49 50-99 148-197 (224)
63 2gd9_A Hypothetical protein YY 34.2 33 0.0011 25.0 3.4 24 12-35 106-129 (189)
64 2v9d_A YAGE; dihydrodipicolini 34.1 1.8E+02 0.0061 23.7 8.1 100 11-115 52-182 (343)
65 3otg_A CALG1; calicheamicin, T 34.1 61 0.0021 25.6 5.1 54 11-69 258-337 (412)
66 3ia7_A CALG4; glycosysltransfe 33.7 59 0.002 25.4 5.0 57 12-68 248-325 (402)
67 3szu_A ISPH, 4-hydroxy-3-methy 32.7 34 0.0012 28.5 3.5 26 11-37 213-238 (328)
68 2ojp_A DHDPS, dihydrodipicolin 32.4 1.8E+02 0.0063 22.8 8.1 100 11-115 22-152 (292)
69 2yz2_A Putative ABC transporte 32.4 1E+02 0.0034 23.9 6.1 79 13-100 114-196 (266)
70 2rfg_A Dihydrodipicolinate syn 32.3 1.4E+02 0.0047 23.7 7.0 100 11-115 21-151 (297)
71 3dnf_A ISPH, LYTB, 4-hydroxy-3 32.1 35 0.0012 28.1 3.4 26 11-37 197-222 (297)
72 2vch_A Hydroquinone glucosyltr 32.1 69 0.0023 27.0 5.4 67 2-68 275-385 (480)
73 1ji0_A ABC transporter; ATP bi 31.6 1E+02 0.0035 23.4 5.9 49 49-99 146-196 (240)
74 3rsc_A CALG2; TDP, enediyne, s 31.2 84 0.0029 24.9 5.5 53 11-68 263-341 (415)
75 2olj_A Amino acid ABC transpor 30.9 1.1E+02 0.0038 23.8 6.1 49 50-99 167-216 (263)
76 3nqr_A Magnesium and cobalt ef 30.7 1.1E+02 0.0036 20.0 5.3 32 10-41 84-115 (127)
77 1f2t_B RAD50 ABC-ATPase; DNA d 30.6 1.2E+02 0.0041 21.5 5.8 44 55-99 76-120 (148)
78 3kpb_A Uncharacterized protein 30.4 1E+02 0.0035 19.6 5.1 32 10-41 78-109 (122)
79 3tif_A Uncharacterized ABC tra 30.3 75 0.0026 24.1 4.9 50 50-99 153-203 (235)
80 1g6h_A High-affinity branched- 30.1 1.2E+02 0.004 23.3 6.1 78 13-99 131-210 (257)
81 3fio_A A cystathionine beta-sy 29.5 86 0.0029 18.1 4.9 31 10-41 8-38 (70)
82 3i7m_A XAA-Pro dipeptidase; st 29.1 44 0.0015 22.9 3.1 20 13-32 6-25 (140)
83 1o5k_A DHDPS, dihydrodipicolin 29.1 1.9E+02 0.0065 23.0 7.4 100 11-115 33-163 (306)
84 1vpl_A ABC transporter, ATP-bi 28.7 1.3E+02 0.0045 23.2 6.2 49 50-99 154-203 (256)
85 2h4a_A YRAM (HI1655); perplasm 28.6 39 0.0013 27.1 3.1 59 12-70 109-185 (325)
86 3usb_A Inosine-5'-monophosphat 28.5 2.8E+02 0.0097 23.8 9.6 76 10-85 192-293 (511)
87 3gfo_A Cobalt import ATP-bindi 28.1 88 0.003 24.6 5.1 22 50-71 151-172 (275)
88 3bfj_A 1,3-propanediol oxidore 28.0 36 0.0012 28.0 2.9 25 10-34 78-102 (387)
89 2vc6_A MOSA, dihydrodipicolina 28.0 1.5E+02 0.005 23.4 6.4 101 11-116 21-152 (292)
90 1thf_D HISF protein; thermophI 27.9 1.9E+02 0.0065 21.6 6.9 60 11-70 30-106 (253)
91 1b0u_A Histidine permease; ABC 27.6 1.2E+02 0.0041 23.4 5.8 48 50-99 161-210 (262)
92 3i8n_A Uncharacterized protein 27.6 1.1E+02 0.0039 20.0 5.0 32 10-41 87-118 (130)
93 3ooo_A Proline dipeptidase; st 27.5 49 0.0017 22.4 3.1 20 13-32 5-24 (132)
94 2ixe_A Antigen peptide transpo 27.3 99 0.0034 24.1 5.2 50 50-99 164-214 (271)
95 3pn9_A Proline dipeptidase; st 27.3 45 0.0015 22.6 2.9 22 11-32 5-26 (138)
96 3o5v_A X-Pro dipeptidase; crea 27.2 49 0.0017 22.4 3.1 19 13-31 5-23 (132)
97 2p6p_A Glycosyl transferase; X 27.2 57 0.0019 25.7 3.8 53 11-68 231-307 (384)
98 3g40_A Na-K-CL cotransporter; 27.2 2.6E+02 0.0088 22.9 8.2 74 13-100 68-146 (294)
99 3ky8_A Putative riboflavin bio 27.0 43 0.0015 25.2 2.9 24 11-34 113-136 (197)
100 2nuw_A 2-keto-3-deoxygluconate 27.0 2.3E+02 0.0078 22.2 8.9 73 11-84 20-119 (288)
101 1rrm_A Lactaldehyde reductase; 27.0 36 0.0012 27.9 2.7 24 10-33 74-97 (386)
102 1w0m_A TIM, triosephosphate is 26.9 1E+02 0.0036 23.9 5.2 54 44-101 69-124 (226)
103 4gqw_A CBS domain-containing p 26.8 1.3E+02 0.0045 19.8 5.3 31 10-40 101-131 (152)
104 1vlj_A NADH-dependent butanol 26.7 39 0.0013 28.1 2.9 25 10-34 87-111 (407)
105 3iv7_A Alcohol dehydrogenase I 26.3 41 0.0014 27.8 2.9 26 10-35 74-99 (364)
106 3il0_A Aminopeptidase P; XAA-P 26.2 49 0.0017 22.2 2.9 23 11-33 6-28 (131)
107 3ox4_A Alcohol dehydrogenase 2 25.8 39 0.0013 28.0 2.7 25 10-34 74-98 (383)
108 1oj7_A Hypothetical oxidoreduc 25.6 39 0.0013 28.1 2.7 24 10-33 92-115 (408)
109 2xdq_B Light-independent proto 25.5 2.2E+02 0.0074 24.3 7.5 63 11-75 183-254 (511)
110 1jq5_A Glycerol dehydrogenase; 25.5 43 0.0015 27.3 2.9 24 11-34 73-96 (370)
111 2ef7_A Hypothetical protein ST 25.2 1.4E+02 0.0048 19.4 5.1 32 10-41 83-114 (133)
112 3hl0_A Maleylacetate reductase 25.2 44 0.0015 27.4 2.9 25 10-34 73-97 (353)
113 3jzd_A Iron-containing alcohol 24.9 41 0.0014 27.7 2.7 26 10-35 75-100 (358)
114 1ka9_F Imidazole glycerol phos 24.8 1.6E+02 0.0055 22.0 5.9 61 11-71 31-108 (252)
115 3hkx_A Amidase; alpha-beta-BET 24.6 1.5E+02 0.0051 22.9 5.8 13 57-69 50-62 (283)
116 2wkj_A N-acetylneuraminate lya 24.6 2.6E+02 0.009 22.1 9.0 102 11-115 32-163 (303)
117 3hf7_A Uncharacterized CBS-dom 24.5 1.4E+02 0.0049 19.6 5.1 32 10-41 85-116 (130)
118 3lqn_A CBS domain protein; csg 24.4 1.4E+02 0.0048 19.8 5.1 32 10-41 33-64 (150)
119 3ghd_A A cystathionine beta-sy 24.4 1.1E+02 0.0039 18.7 4.2 30 10-40 8-37 (70)
120 3lv9_A Putative transporter; C 24.4 1.4E+02 0.0049 19.9 5.1 32 10-41 103-134 (148)
121 3rpz_A ADP/ATP-dependent NAD(P 24.4 57 0.002 26.0 3.3 40 22-69 27-68 (279)
122 3qfe_A Putative dihydrodipicol 24.1 2.8E+02 0.0095 22.2 8.2 101 11-116 32-166 (318)
123 3jtf_A Magnesium and cobalt ef 24.1 1.4E+02 0.0046 19.6 4.9 32 10-41 84-115 (129)
124 3u7q_A Nitrogenase molybdenum- 24.1 1.7E+02 0.0058 25.1 6.5 56 11-67 233-298 (492)
125 1yav_A Hypothetical protein BS 24.0 1.4E+02 0.0049 20.2 5.1 32 10-41 32-63 (159)
126 1vdr_A DHFR, dihydrofolate red 23.8 59 0.002 23.3 3.0 24 12-35 81-104 (162)
127 3h5d_A DHDPS, dihydrodipicolin 23.8 2.8E+02 0.0095 22.1 8.7 101 10-115 27-159 (311)
128 2d2e_A SUFC protein; ABC-ATPas 23.8 1.3E+02 0.0044 23.0 5.2 54 45-99 146-200 (250)
129 2r91_A 2-keto-3-deoxy-(6-phosp 23.7 2.6E+02 0.009 21.8 8.9 73 11-84 19-118 (286)
130 3fhm_A Uncharacterized protein 23.5 1.4E+02 0.0049 20.4 5.1 32 10-41 43-74 (165)
131 2emq_A Hypothetical conserved 23.5 1.6E+02 0.0056 19.6 5.3 32 10-41 29-60 (157)
132 3ovk_A Aminopeptidase P, XAA-P 23.4 58 0.002 22.2 2.9 21 12-32 11-31 (132)
133 2zay_A Response regulator rece 23.3 1.6E+02 0.0055 19.1 5.5 33 53-87 97-129 (147)
134 2nyc_A Nuclear protein SNF4; b 23.2 1.6E+02 0.0053 19.2 5.0 32 10-41 99-130 (144)
135 3oco_A Hemolysin-like protein 23.0 1.4E+02 0.0048 20.2 4.9 32 10-41 101-132 (153)
136 3cpr_A Dihydrodipicolinate syn 22.8 2.9E+02 0.0098 21.9 8.9 100 11-115 37-167 (304)
137 1hg3_A Triosephosphate isomera 22.7 1E+02 0.0035 23.9 4.5 53 44-100 72-126 (225)
138 2yzi_A Hypothetical protein PH 22.5 1.7E+02 0.0057 19.1 5.1 32 10-41 23-54 (138)
139 2uv4_A 5'-AMP-activated protei 22.4 1.6E+02 0.0054 19.8 5.0 32 10-41 109-140 (152)
140 1w3i_A EDA, 2-keto-3-deoxy glu 22.2 2.9E+02 0.0098 21.7 9.0 73 11-84 20-119 (293)
141 2o3a_A UPF0106 protein AF_0751 22.1 1.6E+02 0.0055 22.4 5.2 33 51-86 20-55 (178)
142 2xw7_A Dihydrofolate reductase 21.9 72 0.0025 23.0 3.2 25 11-35 94-119 (178)
143 3k2v_A Putative D-arabinose 5- 21.9 1.6E+02 0.0056 19.7 5.0 32 10-41 46-77 (149)
144 4g1u_C Hemin import ATP-bindin 21.9 1.6E+02 0.0053 22.9 5.4 52 12-70 118-175 (266)
145 2ehh_A DHDPS, dihydrodipicolin 21.5 3E+02 0.01 21.6 8.7 100 11-115 21-151 (294)
146 1h5y_A HISF; histidine biosynt 21.5 2.3E+02 0.0078 20.7 6.1 58 11-69 33-108 (253)
147 1zgz_A Torcad operon transcrip 21.5 1.6E+02 0.0054 18.4 5.8 32 53-86 88-119 (122)
148 3clh_A 3-dehydroquinate syntha 21.4 58 0.002 26.4 2.9 25 11-35 69-96 (343)
149 2xij_A Methylmalonyl-COA mutas 21.4 2.4E+02 0.0083 26.0 7.2 58 12-84 671-729 (762)
150 3d31_A Sulfate/molybdate ABC t 20.8 1.7E+02 0.0059 23.9 5.7 24 50-73 135-158 (348)
151 3uhj_A Probable glycerol dehyd 20.7 56 0.0019 27.2 2.7 25 10-34 92-116 (387)
152 3gby_A Uncharacterized protein 20.6 1.6E+02 0.0056 19.0 4.7 31 10-41 21-51 (128)
153 3m5v_A DHDPS, dihydrodipicolin 20.5 3.2E+02 0.011 21.5 8.8 101 11-116 28-160 (301)
154 2o16_A Acetoin utilization pro 20.3 1.8E+02 0.0063 19.8 5.1 32 10-41 21-52 (160)
155 2ff7_A Alpha-hemolysin translo 20.3 2.6E+02 0.0088 21.2 6.3 48 50-99 153-201 (247)
156 3vsj_A 2-amino-5-chlorophenol 20.3 47 0.0016 26.0 2.0 36 63-99 15-50 (271)
157 2ghi_A Transport protein; mult 20.0 2.2E+02 0.0074 21.9 5.9 49 49-99 162-211 (260)
No 1
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=100.00 E-value=1.3e-43 Score=299.59 Aligned_cols=134 Identities=27% Similarity=0.357 Sum_probs=123.4
Q ss_pred CeecCCCCC---CCcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------------------------
Q psy5985 1 MLGTKRTLP---EKKLPQIAAKLKELKIQALLIIGGFEVS---------------------------------------- 37 (153)
Q Consensus 1 iLgTsR~~~---~e~~~~~~~~L~~~~Id~LvvIGGdgs~---------------------------------------- 37 (153)
+|||||+++ ++++++++++|++++||+||+||||||+
T Consensus 67 ~LGssR~~~~~~~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~i~vvgiPkTIDNDl~~td~t~GfdTA~~~~ 146 (319)
T 1zxx_A 67 FLYSARYPEFAEEEGQLAGIEQLKKHGIDAVVVIGGDGSYHGALQLTRHGFNSIGLPGTIDNDIPYTDATIGYDTACMTA 146 (319)
T ss_dssp TTCCCCCGGGTSHHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHTTCCEEEEEEETTCCCTTCSCCEEHHHHHHHH
T ss_pred ccccCCCCccCCHHHHHHHHHHHHHhCCCEEEEECCchHHHHHHHHHHhCCCEEEEeecccCCCCCCcCCCCHHHHHHHH
Confidence 699999987 4579999999999999999999999998
Q ss_pred ----------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCC
Q psy5985 38 ----------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSIKDLQQDLYHMASKMAEGVQRGLILRNEK 101 (153)
Q Consensus 38 ----------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG 101 (153)
+||||||||+|||||++||||+|||+|||||.||+++++++.++ +++++++++++|+||||
T Consensus 147 ~~aid~i~~ta~s~~rv~iVEvMGR~aG~lAl~a~lA~ga~~iliPE~~~~~~~i~~~i~---~~~~~gk~~~iIvvaEG 223 (319)
T 1zxx_A 147 MDAIDKIRDTASSHHRVFIVNVMGRNCGDIAMRVGVACGADAIVIPERPYDVEEIANRLK---QAQESGKDHGLVVVAEG 223 (319)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCTTCCHHHHHHHHHTTCSEEECTTSCCCHHHHHHHHH---HHHHTTCCCEEEEEETT
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHH---HHHHcCCCcEEEEEeCC
Confidence 99999999999999999999999999999999999999998865 46777899999999999
Q ss_pred CCCCcChHHHHHHHHhhcCCCceeeeeeCCccccCCCCCcc
Q psy5985 102 CNDNYNTDFIYRLYSEEGKGLFSARQNVLAKHDSAYEEEGM 142 (153)
Q Consensus 102 ~~~~~~~~~l~~~~~~e~~~~~~~R~~vLGh~QR~~~p~~~ 142 (153)
+.. ++.+++++++ ++++++|+++|||+|||+.||+.
T Consensus 224 ~~~---~~~l~~~i~~--~~~~~~r~~~lGh~qRgg~ps~~ 259 (319)
T 1zxx_A 224 VMT---ADQFMAELKK--YGDFDVRANVLGHMQRGGTPTVS 259 (319)
T ss_dssp TCC---HHHHHHHHHH--SSCCCEEEEECGGGGGCSCCCHH
T ss_pred cCh---HHHHHHHHHH--hhCceEEEecCCccccCCCCCHH
Confidence 954 6889998876 47899999999999999999974
No 2
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=100.00 E-value=9.9e-44 Score=300.32 Aligned_cols=134 Identities=26% Similarity=0.363 Sum_probs=123.5
Q ss_pred CeecCCCCC---CCcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------------------------
Q psy5985 1 MLGTKRTLP---EKKLPQIAAKLKELKIQALLIIGGFEVS---------------------------------------- 37 (153)
Q Consensus 1 iLgTsR~~~---~e~~~~~~~~L~~~~Id~LvvIGGdgs~---------------------------------------- 37 (153)
+|||||+++ ++.+++++++|++++||+||+||||||+
T Consensus 68 ~LGssR~~~~~~~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~i~vvgiPkTIDNDl~~td~t~GfdTA~~~~ 147 (320)
T 1pfk_A 68 FLGSARFPEFRDENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFPCIGLPGTIDNDIKGTDYTIGFFTALSTV 147 (320)
T ss_dssp TTCCCCCGGGGSHHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHTTCCEEEEEBCTTCCCTTCSCCBTHHHHHHHH
T ss_pred eeccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEECCCchHHHHHHHHhhCCCEEEEeccccCCCCCCcCCCCHHHHHHHH
Confidence 699999986 4579999999999999999999999998
Q ss_pred ----------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCC
Q psy5985 38 ----------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSIKDLQQDLYHMASKMAEGVQRGLILRNEK 101 (153)
Q Consensus 38 ----------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG 101 (153)
+||||||||+|||||++||||+|||+|||||.||+++++++.+++ ++++++++++|+||||
T Consensus 148 ~~aid~i~~ta~s~~rv~iVEvMGR~aG~lAl~a~lA~ga~~iliPE~~~~~~~i~~~i~~---~~~~gk~~~iIvvaEG 224 (320)
T 1pfk_A 148 VEAIDRLRDTSSSHQRISVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKA---GIAKGKKHAIVAITEH 224 (320)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECCTTCCHHHHHHHHHTTCSEEECTTSCCCHHHHHHHHHH---HHHTTCSCEEEEEESS
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCcCHHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHH---HHHcCCCcEEEEEeCC
Confidence 999999999999999999999999999999999999999988654 6778899999999999
Q ss_pred CCCCcChHHHHHHHHhhcCCCceeeeeeCCccccCCCCCcc
Q psy5985 102 CNDNYNTDFIYRLYSEEGKGLFSARQNVLAKHDSAYEEEGM 142 (153)
Q Consensus 102 ~~~~~~~~~l~~~~~~e~~~~~~~R~~vLGh~QR~~~p~~~ 142 (153)
+. +++.++++++++ +++++|+++|||+|||+.||+.
T Consensus 225 ~~---~~~~la~~i~~~--~~~~~r~~~lGh~qRgg~ps~~ 260 (320)
T 1pfk_A 225 MC---DVDELAHFIEKE--TGRETRATVLGHIQRGGSPVPY 260 (320)
T ss_dssp SS---CHHHHHHHHHHH--HSSCEEEEECGGGGGCSCCCHH
T ss_pred cc---hHHHHHHHHHHH--hCCeEEEEcCCccccCCCCCHH
Confidence 85 478899988764 6899999999999999999974
No 3
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=100.00 E-value=8.3e-43 Score=320.83 Aligned_cols=142 Identities=58% Similarity=1.019 Sum_probs=135.2
Q ss_pred CeecCCCCCCCcHHHHHHHHHHcCCcEEEEEcCCCCe-------------------------------------------
Q psy5985 1 MLGTKRTLPEKKLPQIAAKLKELKIQALLIIGGFEVS------------------------------------------- 37 (153)
Q Consensus 1 iLgTsR~~~~e~~~~~~~~L~~~~Id~LvvIGGdgs~------------------------------------------- 37 (153)
+|||||++|++.+++++++|++++||+||+||||||+
T Consensus 466 ~LGTsR~~~~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vvgiPkTIDNDl~gTD~TiGfdTA 545 (762)
T 3o8l_A 466 KLGSKRTLPKKSFEQISANITKFNIQGLVIIGGFEAYTGGLELMEGRKQFDELCIPFVVIPATVSNNVPGSDFSVGADTA 545 (762)
T ss_dssp SSCEECCCSGGGHHHHHHHHHHTTCCCEEEEESHHHHHHHHHHHHHHHHCSTTCSCEEEEEBCTTCCCTTCSCCBTHHHH
T ss_pred eeecCCCCcHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHhccccCCCEEeeccccCCCCCCCcCCCChHHH
Confidence 6999999888889999999999999999999999998
Q ss_pred ---------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCeEEE
Q psy5985 38 ---------------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSIKDLQQDLYHMASKMAEGVQRGLI 96 (153)
Q Consensus 38 ---------------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~~~l~~~i~~i~~~~~~~~~~~iI 96 (153)
+||||||||+|||||++||||+|||+|||||.||+++++.++++.+.+|++++++++||
T Consensus 546 ~~~~~~aid~i~~tA~ssh~rv~vVEvMGR~aG~lAl~aglA~gad~ilIPE~~~~l~~~~~~i~~~~~r~~~~~~~~iV 625 (762)
T 3o8l_A 546 LNTICTTCDRIKQSAAGTKRRVFIIETMGGYCGYLATMAGLAAGADAAYIFEEPFTIRDLQANVEHLVQKMKTTVKRGLV 625 (762)
T ss_dssp HHHHHHHHHHHTTTTCSSSCEEEEEEECSTTCCHHHHHHHHHTTCSEEECSSSCCCHHHHHHHHHHHHHHHTSSCSEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEeCCcchhHHHHHHHHhhCCCEEEECCCCCCHHHHHHHHHHHHHHHhcCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCcChHHHHHHHHhhcCCCceeeeeeCCccccCCCCCcc
Q psy5985 97 LRNEKCNDNYNTDFIYRLYSEEGKGLFSARQNVLAKHDSAYEEEGM 142 (153)
Q Consensus 97 vvaEG~~~~~~~~~l~~~~~~e~~~~~~~R~~vLGh~QR~~~p~~~ 142 (153)
|||||+...+++++++++++++.++++++|+++|||+||||.|++.
T Consensus 626 vvaEga~~~~~~~~~~~~~~~~~~~~~d~R~tvLGH~QRGG~Pta~ 671 (762)
T 3o8l_A 626 LRNEKCNENYTTDFIFNLYSEEGKGIFDSRKNVLGHMQQGGSPTPF 671 (762)
T ss_dssp EEETTSCSSSCHHHHHHHHHHHTTTTCEEEEEECCCCCTTSCCCHH
T ss_pred EEECCCCccchHHHHHHHHHhhccCCceEEEeeCchhhCCCCCCHH
Confidence 9999999888899999988776668899999999999999999985
No 4
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=100.00 E-value=1.5e-41 Score=286.69 Aligned_cols=134 Identities=25% Similarity=0.305 Sum_probs=120.8
Q ss_pred CeecCCCCC---CCcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------------------------
Q psy5985 1 MLGTKRTLP---EKKLPQIAAKLKELKIQALLIIGGFEVS---------------------------------------- 37 (153)
Q Consensus 1 iLgTsR~~~---~e~~~~~~~~L~~~~Id~LvvIGGdgs~---------------------------------------- 37 (153)
+|||||+++ ++.+++++++|++++||+|++||||||+
T Consensus 67 ~lgtsR~~~~~~~e~~~~~~~~l~~~~Id~L~~IGGdgS~~~a~~l~~~~i~vigiPkTIDNDl~~td~t~GfdTA~~~~ 146 (319)
T 4a3s_A 67 KLYTARCPEFKTVEGREKGIANLKKLGIEGLVVIGGDGSYMGAKKLTEHGFPCVGVPGTIDNDIPGTDFTIGFDTALNTV 146 (319)
T ss_dssp TTCCCCCHHHHSHHHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHHHHTTCCEEEEEEETTCCCTTCSCCEEHHHHHHHH
T ss_pred ccccCCCCccccHHHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHhccCCcEEEeeccccCCCCCCCCCCCHHHHHHHH
Confidence 589999976 5689999999999999999999999998
Q ss_pred ----------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCC
Q psy5985 38 ----------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSIKDLQQDLYHMASKMAEGVQRGLILRNEK 101 (153)
Q Consensus 38 ----------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG 101 (153)
+||||||||+|||||++||||+|||.|||||.||+++++++++++ ++++++++++||||||
T Consensus 147 ~~ai~~i~~~a~s~~rv~ivEvMGR~aG~lA~~a~la~ga~~iliPE~~~~~~~~~~~i~~---~~~~g~~~~iivvaEG 223 (319)
T 4a3s_A 147 IDAIDKIRDTATSHERTYVIEVMGRHAGDIALWAGLAGGAESILIPEADYDMHEIIARLKR---GHERGKKHSIIIVAEG 223 (319)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECCTTCCHHHHHHHHHHTCSEEEBTTBCCCHHHHHHHHHH---HHTTTCCCEEEEEETT
T ss_pred HHHHHHHHhhhhccCCeEEEEeCCcchhHHHHHHHhccCCCEEEecCCCCCHHHHHHHHHH---HHHcCCCceEEEEECC
Confidence 999999999999999999999999999999999999999998754 5567789999999999
Q ss_pred CCCCcChHHHHHHHHhhcCCCceeeeeeCCccccCCCCCcc
Q psy5985 102 CNDNYNTDFIYRLYSEEGKGLFSARQNVLAKHDSAYEEEGM 142 (153)
Q Consensus 102 ~~~~~~~~~l~~~~~~e~~~~~~~R~~vLGh~QR~~~p~~~ 142 (153)
+.. ...+++.+++ ++++++|+++|||+|||+.|++.
T Consensus 224 ~~~---~~~~~~~~~~--~~g~~~r~~~lGh~qRgg~psa~ 259 (319)
T 4a3s_A 224 VGS---GVEFGKRIEE--ETNLETRVSVLGHIQRGGSPSAA 259 (319)
T ss_dssp TCC---HHHHHHHHHH--HHCCCEEEEECGGGGGCSSCCHH
T ss_pred CCc---chHHHHHHHH--hCCceEEEcchhHHHhCCCCCHH
Confidence 976 3566666665 36899999999999999999874
No 5
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=100.00 E-value=8.1e-41 Score=312.12 Aligned_cols=142 Identities=33% Similarity=0.588 Sum_probs=129.9
Q ss_pred CeecCCCCCCCcHHHHHHHHHHcCCcEEEEEcCCCCe-------------------------------------------
Q psy5985 1 MLGTKRTLPEKKLPQIAAKLKELKIQALLIIGGFEVS------------------------------------------- 37 (153)
Q Consensus 1 iLgTsR~~~~e~~~~~~~~L~~~~Id~LvvIGGdgs~------------------------------------------- 37 (153)
+|||||++|.+.+++++++|++++||+||+|||||||
T Consensus 665 iLGTsR~~~~~~~~~i~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~~~y~~~~I~vVGIPkTIDNDl~gTD~TiGFdTA 744 (989)
T 3opy_A 665 EIGTNRSLPSDDMGTVAYYFQQYKFDGLIIIGGFEAFTALYELDAARAQYPIFNIPMCCLPATVSNNVPGTEYSLGSDTC 744 (989)
T ss_dssp SSCCBCCCGGGGHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHTTTCGGGCSCEEEEEBCSSCCCTTCSCCBTHHHH
T ss_pred EeccCCCCchhhHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHhhCCCcCCcEEeccccccCCCCCCcCCCChHHH
Confidence 6999999887789999999999999999999999998
Q ss_pred ---------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHHHHHHHHHHHHHH--cC--CC
Q psy5985 38 ---------------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSIKDLQQDLYHMASKMA--EG--VQ 92 (153)
Q Consensus 38 ---------------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~~~l~~~i~~i~~~~~--~~--~~ 92 (153)
+||||||||+|||||++||||+|||+|||||.||++++++++++.+.++++ ++ ++
T Consensus 745 vn~~~eaId~i~~tA~ssh~RvfIVEVMGR~aG~LAl~agLA~GAd~ilIPE~~f~l~~l~~~i~~l~~~~~~~~g~~~~ 824 (989)
T 3opy_A 745 LNTLSGYCDAVKQSASASRRRTFVVEVQGGYSGYLASYAGLITGALAVYTPENPINLQTVQEDIELLTRTYEEDDGKNRS 824 (989)
T ss_dssp HHHHHHHHHHHHHHTC-CCCSEEEEEECCTTCSHHHHHHHHHHTCSCEECTTSCCCHHHHHHHHHHHHHHHTTCC---CC
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEEeCCcchhHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHHHHHHHHHhccCCcc
Confidence 999999999999999999999999999999999999999999988777765 22 35
Q ss_pred eEEEEEeCCCCCCcChHHHHHHHHhhcCCCceeeeeeCCccccCCCCCcc
Q psy5985 93 RGLILRNEKCNDNYNTDFIYRLYSEEGKGLFSARQNVLAKHDSAYEEEGM 142 (153)
Q Consensus 93 ~~iIvvaEG~~~~~~~~~l~~~~~~e~~~~~~~R~~vLGh~QR~~~p~~~ 142 (153)
++||+||||+...++++.+++.++++..+++++|+++|||+||||.|+|.
T Consensus 825 ~~IIvvaEga~~~~~~~~la~~i~e~~~~~~e~R~tvLGHiQRGG~Psa~ 874 (989)
T 3opy_A 825 GKIFIHNEKASKVYTTDLIAAIIGEAGKGRFESRTAVPGHVQQGKSPSSI 874 (989)
T ss_dssp CEEEEEESSSCSSSCHHHHHHHHHHTTTTTSCEEEECCGGGGGCSSCCHH
T ss_pred ceEEEEeCCCcCCCCHHHHHHHHHHhcCCCceeEecccccccCCCCCCHH
Confidence 68999999998888899999999876556799999999999999999985
No 6
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-40 Score=306.55 Aligned_cols=142 Identities=30% Similarity=0.467 Sum_probs=129.5
Q ss_pred CeecCCCCC-CCcHHHHHHHHHHcCCcEEEEEcCCCCe------------------------------------------
Q psy5985 1 MLGTKRTLP-EKKLPQIAAKLKELKIQALLIIGGFEVS------------------------------------------ 37 (153)
Q Consensus 1 iLgTsR~~~-~e~~~~~~~~L~~~~Id~LvvIGGdgs~------------------------------------------ 37 (153)
+|||||++| .+++++++++|++++||+||+|||||||
T Consensus 460 ~LGTsR~~~~~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vvgiPkTIDNDl~gTD~T~GfdT 539 (766)
T 3o8o_B 460 EIGTNRVTPEEADLGMIAYYFQKYEFDGLIIVGGFEAFESLHQLERARESYPAFRIPMVLIPATLSNNVPGTEYSLGSDT 539 (766)
T ss_dssp TTCCCCCCGGGGCHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHTTTTTCGGGCSCCCEEEBCTTCCCSSCSCCBTHHH
T ss_pred eEccCCCCCccchHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHHhcCccCCcEEeeccccccCCCCCCCCCChhH
Confidence 699999987 4578999999999999999999999997
Q ss_pred ----------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHHHHHHHHHHHHHH----cCC
Q psy5985 38 ----------------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSIKDLQQDLYHMASKMA----EGV 91 (153)
Q Consensus 38 ----------------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~~~l~~~i~~i~~~~~----~~~ 91 (153)
+||||||||+|||||++||||+|||+|||||.||++++++++++.+.++++ +++
T Consensus 540 A~~~~~~aid~i~~ta~ss~~rv~iVEvMGR~aG~lAl~aglA~ga~~ilIPE~~~~~~~~~~~i~~~~~~~~~~~~~~~ 619 (766)
T 3o8o_B 540 ALNALMEYCDVVKQSASSTRGRAFVVDCQGGNSGYLATYASLAVGAQVSYVPEEGISLEQLSEDIEYLAQSFEKAEGRGR 619 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSEEEEEEECCTTCCHHHHHHHHHHTCSEEECTTTCCCHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHHhhccCCcEEEEEeCCCchhHHHHHHHHhhCCCEEEeCCCCCCHHHHHHHHHHHHHHHhhhhccCC
Confidence 999999999999999999999999999999999999999999987776665 345
Q ss_pred CeEEEEEeCCCCCCcChHHHHHHHHhhcCCCceeeeeeCCccccCCCCCcc
Q psy5985 92 QRGLILRNEKCNDNYNTDFIYRLYSEEGKGLFSARQNVLAKHDSAYEEEGM 142 (153)
Q Consensus 92 ~~~iIvvaEG~~~~~~~~~l~~~~~~e~~~~~~~R~~vLGh~QR~~~p~~~ 142 (153)
.+.+|+++||+...++++.++++++++..+++++|+++|||+||||.||+.
T Consensus 620 ~~~iivvaEg~~~~~~~~~la~~i~~~~~~~~e~R~tvLGhiQRGG~Ps~~ 670 (766)
T 3o8o_B 620 FGKLILKSTNASKALSATKLAEVITAEADGRFDAKPAYPGHVQQGGLPSPI 670 (766)
T ss_dssp CCEEEEEEGGGCSSCCHHHHHHHHHHHHTTSCEEEEEBCGGGGGCSSCCHH
T ss_pred CceEEEEeCCcCCCCcHHHHHHHHHHHhCCCceEEEecccccccCCCCCHH
Confidence 678999999998778899999999876557899999999999999999985
No 7
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-40 Score=305.19 Aligned_cols=142 Identities=27% Similarity=0.489 Sum_probs=129.3
Q ss_pred CeecCCCCCCCcHHHHHHHHHHcCCcEEEEEcCCCCe-------------------------------------------
Q psy5985 1 MLGTKRTLPEKKLPQIAAKLKELKIQALLIIGGFEVS------------------------------------------- 37 (153)
Q Consensus 1 iLgTsR~~~~e~~~~~~~~L~~~~Id~LvvIGGdgs~------------------------------------------- 37 (153)
+|||||++|.+++++++++|++++||+||+|||||||
T Consensus 460 ~LGTsR~~~~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vIgiPkTIDNDl~gTD~t~GfdTA 539 (787)
T 3o8o_A 460 EIGTNRSVASEDLGTIAYYFQKNKLDGLIILGGFEGFRSLKQLRDGRTQHPIFNIPMCLIPATVSNNVPGTEYSLGVDTC 539 (787)
T ss_dssp TTCCBCCCGGGCHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHTTTCGGGGSCEEEEEBCTTCCCTTCSCCBTHHHH
T ss_pred eeccCCCCchhhHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHHhcCccCCceeecccccccCCCCCcCCCCchHH
Confidence 6999999886678999999999999999999999998
Q ss_pred ---------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHHHHHHHHHHHHHH--c--CCC
Q psy5985 38 ---------------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSIKDLQQDLYHMASKMA--E--GVQ 92 (153)
Q Consensus 38 ---------------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~~~l~~~i~~i~~~~~--~--~~~ 92 (153)
+||||||||+|||||++||||+|||+|||||.||++++++++++.+.++++ + ++.
T Consensus 540 ~~~~~eaid~i~~ta~ss~~rv~iVEvMGR~aG~lAl~aglA~ga~~iliPE~~~~~~~~~~~i~~~~~~~~~~~g~~~~ 619 (787)
T 3o8o_A 540 LNALVNYTDDIKQSASATRRRVFVCEVQGGHSGYIASFTGLITGAVSVYTPEKKIDLASIREDITLLKENFRHDKGENRN 619 (787)
T ss_dssp HHHHHHHHHHHHHHHHHHSSEEEEEEECCTTCTHHHHHHHHTTTCSEEECSSSCCCHHHHHHHHHHHHHHHHHCCSCSSC
T ss_pred HHHHHHHHHHHHHHhhccCCcEEEEEeCCCCccHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999999999999999999999999999988777764 2 334
Q ss_pred eEEEEEeCCCCCCcChHHHHHHHHhhcCCCceeeeeeCCccccCCCCCcc
Q psy5985 93 RGLILRNEKCNDNYNTDFIYRLYSEEGKGLFSARQNVLAKHDSAYEEEGM 142 (153)
Q Consensus 93 ~~iIvvaEG~~~~~~~~~l~~~~~~e~~~~~~~R~~vLGh~QR~~~p~~~ 142 (153)
+.+|+++||+...++++.++++++++..+++++|+++|||+||||.||+.
T Consensus 620 ~~iivvaEg~~~~~~~~~la~~i~~~~~~~~e~R~tvLGhiQRGG~Ps~~ 669 (787)
T 3o8o_A 620 GKLLVRNEQASSVYSTQLLADIISEASKGKFGVRTAIPGHVQQGGVPSSK 669 (787)
T ss_dssp CEEEEEETTSCSSSCHHHHHHHHHHHHTTSSEEEEEBCGGGGGCSSCCHH
T ss_pred ceEEEEeCCccCCCCHHHHHHHHHHHhCCCceeEEecccccccCCCCCHH
Confidence 58999999998878899999999876556899999999999999999985
No 8
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=100.00 E-value=2.2e-40 Score=309.05 Aligned_cols=142 Identities=30% Similarity=0.503 Sum_probs=129.8
Q ss_pred CeecCCCCC-CCcHHHHHHHHHHcCCcEEEEEcCCCCe------------------------------------------
Q psy5985 1 MLGTKRTLP-EKKLPQIAAKLKELKIQALLIIGGFEVS------------------------------------------ 37 (153)
Q Consensus 1 iLgTsR~~~-~e~~~~~~~~L~~~~Id~LvvIGGdgs~------------------------------------------ 37 (153)
+|||||++| .+++++++++|++++||+||+|||||||
T Consensus 638 iLGTsR~~~~~~~~~~i~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vVGIPkTIDNDl~gTD~TiGfdT 717 (941)
T 3opy_B 638 EIGTNRTLPNDADIGMIAYFFEKYGFDGLILVGGFEAFISLHQLERARINYPSLRIPLVLIPATISNNVPGTEYSLGSDT 717 (941)
T ss_dssp SSCEECCCTTTSCHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHGGGTCGGGCSCEEEEEBCSSCCCTTCSCCBTHHH
T ss_pred EeccCCCCcccchHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHhcCccCCcEEeeeccccCCCCCCCCCCChHH
Confidence 699999987 5578999999999999999999999998
Q ss_pred ----------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHHHHHHHHHHHHHH----cCC
Q psy5985 38 ----------------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSIKDLQQDLYHMASKMA----EGV 91 (153)
Q Consensus 38 ----------------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~~~l~~~i~~i~~~~~----~~~ 91 (153)
+||||||||+|||||++||||+|||+|||||.||++++++++++.+.++++ +++
T Consensus 718 A~~~i~eaid~i~~tA~ssh~RvfiVEvMGR~aG~LAl~agLA~GAd~ilIPE~~~~l~~l~~~i~~l~~~~~~~~g~~~ 797 (941)
T 3opy_B 718 CLNSFMEYCDVIKQSAAATRNRVFVVEVQGGNSGYIATHAQLACGAQISYVPEEGISLAQLEMDINSLKESFANDQGKTK 797 (941)
T ss_dssp HHHHHHHHHHHHHHHHHHC-CEEEEEEECSTTCCHHHHHHHHHHTCSEEECTTTCCCHHHHHHHHHHHHHHHHTCTTSCC
T ss_pred HHHHHHHHHHHHHHHhhhcCCcEEEEEeCCcchhHHHHHHHHhhCCCEEEeCCCCCCHHHHHHHHHHHHHHHhhhhcCCC
Confidence 999999999999999999999999999999999999999999988877775 334
Q ss_pred CeEEEEEeCCCCCCcChHHHHHHHHhhcCCCceeeeeeCCccccCCCCCcc
Q psy5985 92 QRGLILRNEKCNDNYNTDFIYRLYSEEGKGLFSARQNVLAKHDSAYEEEGM 142 (153)
Q Consensus 92 ~~~iIvvaEG~~~~~~~~~l~~~~~~e~~~~~~~R~~vLGh~QR~~~p~~~ 142 (153)
++.||++|||+...++++.++++++++..+++++|+++|||+||||.||+.
T Consensus 798 ~~~iIvvaEga~~~~~~~~la~~i~~~~~~g~e~R~tvLGHiQRGG~Psa~ 848 (941)
T 3opy_B 798 SGRLILKSENASKVLTTEVISTIIDDEASGRFDSKTAIPGHVQQGGIPSPM 848 (941)
T ss_dssp CCEEEEEEGGGCSSSCHHHHHHHHHHHHTTSSEEEEECCCTTTTCSSCCHH
T ss_pred CceEEEEeCCccCCCCHHHHHHHHHHHhCCCceeEEccccccccCCCCCHH
Confidence 558999999998878899999999876556899999999999999999985
No 9
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.7e-40 Score=300.65 Aligned_cols=140 Identities=21% Similarity=0.304 Sum_probs=123.7
Q ss_pred CeecCCCCC---CCcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------------------------
Q psy5985 1 MLGTKRTLP---EKKLPQIAAKLKELKIQALLIIGGFEVS---------------------------------------- 37 (153)
Q Consensus 1 iLgTsR~~~---~e~~~~~~~~L~~~~Id~LvvIGGdgs~---------------------------------------- 37 (153)
+|||||+++ ++.+.+++++|++++||+||+||||||+
T Consensus 72 iLGTsR~~~~~~~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~A~~l~~e~~~l~~eL~~~~~is~e~~~~~~~i~vVGiP 151 (766)
T 3o8o_B 72 NIGTARCMEFKKREGRLLGAQHLIEAGVDALIVCGGDGSLTGADLFRSEWPSLIEELLKTNRISNEQYERMKHLNICGTV 151 (766)
T ss_dssp TTCCCCCSGGGSHHHHHHHHHHHHHHTCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHTCCCEEEEEE
T ss_pred eeccCCCCcccCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHhhhHHHHHHHhcccccHHHHhcCCCCcEEEEe
Confidence 699999987 3568899999999999999999999983
Q ss_pred ---------------------------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHHHH
Q psy5985 38 ---------------------------------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSIKDLQQ 78 (153)
Q Consensus 38 ---------------------------------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~~~l~~ 78 (153)
+||||||||+|||||++||||+|||+|||||.||+++++.+
T Consensus 152 kTIDNDl~gTD~TiGfdTA~~~i~eaid~i~~tA~Sh~RvfvVEvMGR~aG~LAl~aglA~gAd~ilIPE~p~~~~~~~~ 231 (766)
T 3o8o_B 152 GSIDNDMSTTDATIGAYSALDRICKAIDYVEATANSHSRAFVVEVMGRNCGWLALLAGIATSADYIFIPEKPATSSEWQD 231 (766)
T ss_dssp BCTTCCCTTCSCCBTHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCTTCCHHHHHHHHHHTCSEEECTTCCCCTTHHHH
T ss_pred ccccCCCCCCCCCCChhHHHHHHHHHHHHHHhhhhccCceEEEEcCCcchhHHHHHHHHhcCCCEEEccCCCCChHHHHH
Confidence 99999999999999999999999999999999999988888
Q ss_pred HHHH-HHHHHHcCCCeEEEEEeCCCCCC----cChHHHHHHHHhhcCCCceeeeeeCCccccCCCCCcc
Q psy5985 79 DLYH-MASKMAEGVQRGLILRNEKCNDN----YNTDFIYRLYSEEGKGLFSARQNVLAKHDSAYEEEGM 142 (153)
Q Consensus 79 ~i~~-i~~~~~~~~~~~iIvvaEG~~~~----~~~~~l~~~~~~e~~~~~~~R~~vLGh~QR~~~p~~~ 142 (153)
++.. +.++..++++++|||||||+.+. .+++.+++++++ ++++++|+++|||+|||+.|++.
T Consensus 232 ~v~~~i~~~~~~gk~~~IVvVaEGa~~~~~~~~~~~~l~~~i~~--~~g~~~R~tvLGh~QRGG~Psa~ 298 (766)
T 3o8o_B 232 QMCDIVSKHRSRGKRTTIVVVAEGAIAADLTPISPSDVHKVLVD--RLGLDTRITTLGHVQRGGTAVAY 298 (766)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEETTCBCTTSCBCCHHHHHHHHHH--TTCCCEEEEECGGGGTCSCCCHH
T ss_pred HHHHHHHHHHhcCCCceEEEEeCCcccccCCcchHHHHHHHHHH--HhCCceeEcccChhhcCCCCChh
Confidence 7754 33445678899999999999653 356788888876 47899999999999999999974
No 10
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=100.00 E-value=7.4e-40 Score=285.02 Aligned_cols=135 Identities=16% Similarity=0.161 Sum_probs=118.0
Q ss_pred CeecCCCCC------CCcHHHHHHHHHHcCCcEEEEEcCCCCe-------------------------------------
Q psy5985 1 MLGTKRTLP------EKKLPQIAAKLKELKIQALLIIGGFEVS------------------------------------- 37 (153)
Q Consensus 1 iLgTsR~~~------~e~~~~~~~~L~~~~Id~LvvIGGdgs~------------------------------------- 37 (153)
+|||||+++ ++.+++++++|++++||+||+||||||+
T Consensus 75 iLGSsR~~~~~~~~~~~~~~~~~~~l~~~~Id~Lv~IGGdgS~~~A~~L~~~~~~~g~~i~vIGiPkTIDNDl~~tD~t~ 154 (419)
T 3hno_A 75 AFGSCRYKLKSLEQNRREYERLIEVFKAHDIGYFFYNGGGDSADTCLKVSQLSGTLGYPIQAIHVPKTVDNDLPITDCCP 154 (419)
T ss_dssp TTCCCCCC------CHHHHHHHHHHHHHTTEEEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEECCTTCCCSSSSSCT
T ss_pred eecCCCCCccccccCHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHHhCCCccEEEecccccCCCcCCCCCC
Confidence 699999886 3679999999999999999999999998
Q ss_pred -----------------------------EEEEEecCCCcCHHHHHHHhh-----cCCCEEEEcCCCCCHHHHHHHHHHH
Q psy5985 38 -----------------------------FFALKTMGGYCGYLATVAGLA-----GGADAAYIYEEKFSIKDLQQDLYHM 83 (153)
Q Consensus 38 -----------------------------v~iVEvMGR~aG~LA~~aglA-----~gad~iliPE~~~~~~~l~~~i~~i 83 (153)
+||||||||+|||||++|||| +|||+|||||.||++++++++|++
T Consensus 155 GFdTA~~~~~~~i~~~~~d~~ss~~sh~rv~iVEvMGR~aG~lAl~aglA~~~~~~gad~ilIPE~~f~~~~~~~~i~~- 233 (419)
T 3hno_A 155 GFGSVAKYIAVSTLEASFDVASMSATSTKVFVLEVMGRHAGWIAAAGGLASSPEREIPVVILFPEISFDKQKFLAKVDS- 233 (419)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEECCSSCCHHHHGGGGGCCSSSCCCEEEECTTSCCCHHHHHHHHHH-
T ss_pred CchHHHHHHHHHHHHHHHHHHhhccCCCcEEEEEcCCcChhHHHHHHHHhcccCCCCceEEEeCCCCCCHHHHHHHHHH-
Confidence 899999999999999999999 799999999999999999998765
Q ss_pred HHHHHcCCCeEEEEEeCCCCCCc--------------------ChHHHHHHHHhhcCCCceeeeeeCCccccCCC--CCc
Q psy5985 84 ASKMAEGVQRGLILRNEKCNDNY--------------------NTDFIYRLYSEEGKGLFSARQNVLAKHDSAYE--EEG 141 (153)
Q Consensus 84 ~~~~~~~~~~~iIvvaEG~~~~~--------------------~~~~l~~~~~~e~~~~~~~R~~vLGh~QR~~~--p~~ 141 (153)
++++ ++++|||||||+.+.. .++.++++++++ +++++|+++|||+|||+. ||+
T Consensus 234 --~~~~-~~~~iIvVaEG~~~~~g~~i~~~~~~D~~G~~~l~gi~~~la~~i~~~--~g~~~R~~~lGh~QRgg~p~ps~ 308 (419)
T 3hno_A 234 --CVKK-FGYCSVVVSEGVKGDDGKFLSDQGVRDAFGHAQLGGVAPVVASMVKEG--LGLKYHWGVADYLQRAARHIASK 308 (419)
T ss_dssp --HHHH-HSCEEEEEETTCCCSSSCC---------------CCSHHHHHHHHHHH--HCCCEEEEECTHHHHSCGGGCBH
T ss_pred --HHHh-CCCEEEEEeCCCcccCCcchhcccccccccCcccCcHHHHHHHHHHHH--hCCceEEcccchhhccCCCCCCH
Confidence 3444 5689999999987521 256788888763 689999999999999999 554
No 11
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=100.00 E-value=4.1e-39 Score=300.52 Aligned_cols=140 Identities=22% Similarity=0.328 Sum_probs=122.4
Q ss_pred CeecCCCCC---CCcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------------------------
Q psy5985 1 MLGTKRTLP---EKKLPQIAAKLKELKIQALLIIGGFEVS---------------------------------------- 37 (153)
Q Consensus 1 iLgTsR~~~---~e~~~~~~~~L~~~~Id~LvvIGGdgs~---------------------------------------- 37 (153)
+|||||+++ ++.+.+++++|++++||+||+||||||+
T Consensus 250 iLGSsR~~~f~~~~~~~~~~~~L~~~gId~LvvIGGDGS~~gA~~l~~e~~~l~~eL~~~gkis~e~~~~~~~i~VVGIP 329 (941)
T 3opy_B 250 NIGTARCKEFRERSGRLKACKNMIDMGIDALIVCGGDGSLTGADRFRSEWPSLIEELLQTEQISQQQFNTHQNLNICGAV 329 (941)
T ss_dssp SSCCCCCSGGGSHHHHHHHHHHHHHHTCCEEEEEECHHHHHHHHHHHHTCCCCCCC--------CHHHHHTCSCEEEEEE
T ss_pred eeccCCCCcccCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHhhhHHHHHHHhhccccHHHHhcCCCCcEEEEe
Confidence 699999987 3568899999999999999999999983
Q ss_pred ---------------------------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHHHH
Q psy5985 38 ---------------------------------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSIKDLQQ 78 (153)
Q Consensus 38 ---------------------------------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~~~l~~ 78 (153)
+||||||||+|||||++||||+|||+|||||.||+++++.+
T Consensus 330 kTIDNDl~gTD~TiGfdTAv~~i~eaId~I~~tA~Sh~RvfvVEVMGR~aG~LAl~agLA~GAd~IlIPE~p~~~~~~~~ 409 (941)
T 3opy_B 330 GSIDNDMSSTDATIGAFSSLDRICRAIDYIDATANSHSRAFIVEVMGRHCGWLGLLAGLATSADYILIPEKPASSREWQD 409 (941)
T ss_dssp EESSCCCSSCSSCEEHHHHHHHHHHHHHHHHSCC-CCSEEEEEECCCSSCCHHHHHHHHHTTCSEEECTTSCCCSSCHHH
T ss_pred ecccCCCCCCCCCCChHHHHHHHHHHHHHHHhhhhccCceEEEEcCCCcccHHHHHHHHhcCCCEEEECCCCCChHHHHH
Confidence 99999999999999999999999999999999999977777
Q ss_pred HHHH-HHHHHHcCCCeEEEEEeCCCCCC----cChHHHHHHHHhhcCCCceeeeeeCCccccCCCCCcc
Q psy5985 79 DLYH-MASKMAEGVQRGLILRNEKCNDN----YNTDFIYRLYSEEGKGLFSARQNVLAKHDSAYEEEGM 142 (153)
Q Consensus 79 ~i~~-i~~~~~~~~~~~iIvvaEG~~~~----~~~~~l~~~~~~e~~~~~~~R~~vLGh~QR~~~p~~~ 142 (153)
++.. +.++..++++++|||||||+.+. .+++.+++++++ ++|+++|.++|||+|||+.|++.
T Consensus 410 ~v~~~i~~~~~~gk~~~IVVVAEGa~~~~~~~i~~~~l~~~i~~--~~g~d~R~tvLGhiQRGG~Psa~ 476 (941)
T 3opy_B 410 QMCDIVGKHRARGKRKTIVIVAEGAISNDLSPISCDQVKDVLVN--RLGLDTRVTTLGHVQRGGTAVAF 476 (941)
T ss_dssp HHHHHHHHHHHHTCCCEEEEECTTCBCTTCCBCCHHHHHHHHHH--TSCCEEEEEECGGGGTCSCCCHH
T ss_pred HHHHHHHHHHhcCCCcEEEEEeCCcccccCCcchHHHHHHHHHH--HhCCceeecccChhhcCCCCChh
Confidence 6653 33445678999999999999653 356788888766 57899999999999999999873
No 12
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-39 Score=295.85 Aligned_cols=139 Identities=24% Similarity=0.347 Sum_probs=121.5
Q ss_pred CeecCCCCC---CCcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------------------------
Q psy5985 1 MLGTKRTLP---EKKLPQIAAKLKELKIQALLIIGGFEVS---------------------------------------- 37 (153)
Q Consensus 1 iLgTsR~~~---~e~~~~~~~~L~~~~Id~LvvIGGdgs~---------------------------------------- 37 (153)
+|||||+++ ++.+.+++++|++++||+||+||||||+
T Consensus 73 iLGTsR~~~f~~~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~A~~l~~e~~~l~~eL~~~~~is~e~~~~~~~i~vVGIP 152 (787)
T 3o8o_A 73 LIGTARSMEFRKREGRRQAAGNLISQGIDALVVCGGDGSLTGADLFRHEWPSLVDELVAEGRFTKEEVAPYKNLSIVGLV 152 (787)
T ss_dssp TTCCCCCSGGGSHHHHHHHHHHHHHHTEEEEEEEECHHHHHHHHHHHTTHHHHHHHHHSSSSCCTTTTTTTCSCEEEEEE
T ss_pred eeccCCCCcccCHHHHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHHHhhHHHHHHHHhcccccHHHHhcCCCCcEEEEe
Confidence 699999987 3568899999999999999999999983
Q ss_pred ---------------------------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHHHH
Q psy5985 38 ---------------------------------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSIKDLQQ 78 (153)
Q Consensus 38 ---------------------------------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~~~l~~ 78 (153)
+||||||||+|||||++||||+|||+|||||.||+++++.+
T Consensus 153 kTIDNDl~gTD~TiGfdTAl~~i~eaid~i~~tA~Sh~RvfvVEVMGR~aG~LAl~agLA~gAd~ilIPE~p~~~~~~~~ 232 (787)
T 3o8o_A 153 GSIDNDMSGTDSTIGAYSALERICEMVDYIDATAKSHSRAFVVEVMGRHCGWLALMAGIATGADYIFIPERAVPHGKWQD 232 (787)
T ss_dssp EESSCCCTTSSCCEEHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCTTCCHHHHHHHHHTTCSEEECGGGCBCTTTHHH
T ss_pred ecCcCCCCCCCCCCCcHHHHHHHHHHHHHHHhhhhccCceEEEEcCCcchhHHHHHHHHhhCCCEEEeCCCCCChHHHHH
Confidence 99999999999999999999999999999999999987777
Q ss_pred HHHHHH-HHHHcCCCeEEEEEeCCCCCC----cChHHHHHHHHhhcCCCceeeeeeCCccccCCCCCcc
Q psy5985 79 DLYHMA-SKMAEGVQRGLILRNEKCNDN----YNTDFIYRLYSEEGKGLFSARQNVLAKHDSAYEEEGM 142 (153)
Q Consensus 79 ~i~~i~-~~~~~~~~~~iIvvaEG~~~~----~~~~~l~~~~~~e~~~~~~~R~~vLGh~QR~~~p~~~ 142 (153)
++..+. ++..++++++|||||||+.+. .+++.+++++++ +++++|.++|||+|||+.|++.
T Consensus 233 ~v~~~i~~~~~~gk~~~IVvVaEGa~~~~~~~~~~~~~~~~i~~---~g~~~R~tvLGh~QRGG~Psa~ 298 (787)
T 3o8o_A 233 ELKEVCQRHRSKGRRNNTIIVAEGALDDQLNPVTANDVKDALIE---LGLDTKVTILGHVQRGGTAVAH 298 (787)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEETTCBBTTSCBCCHHHHHHHHHH---HTCCEEEEECGGGGTCSCCCHH
T ss_pred HHHHHHHHHHhcCCCceEEEEeCCCccccCcchhHHHHHHHHHH---hCCcceeeccCHhhcCCCCChH
Confidence 775433 345678899999999999643 356778887765 5799999999999999999974
No 13
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=100.00 E-value=5.3e-39 Score=295.63 Aligned_cols=137 Identities=26% Similarity=0.317 Sum_probs=121.5
Q ss_pred CeecCCCCC---CCcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------------------------
Q psy5985 1 MLGTKRTLP---EKKLPQIAAKLKELKIQALLIIGGFEVS---------------------------------------- 37 (153)
Q Consensus 1 iLgTsR~~~---~e~~~~~~~~L~~~~Id~LvvIGGdgs~---------------------------------------- 37 (153)
+|||||+++ ++++++++++|++++||+||+||||||+
T Consensus 83 iLGSsR~~~f~~~~~~~~~~~~l~~~~Id~LvvIGGdgS~~gA~~l~~e~~~ll~eL~~~g~i~~~~~~~~~~i~vVGIP 162 (762)
T 3o8l_A 83 VIGSARCKDFREREGRLRAAHNLVKRGITNLCVIGGDGSLTGADTFRSEWSDLLSDLQKAGKITAEEATRSSYLNIVGLV 162 (762)
T ss_dssp SSCCCCCCGGGSHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHTTHHHHHHTTTTTSCTTTGGGSTTCCEEEEEE
T ss_pred cccCCCCCcccCHHHHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHHHHhHHHHHHHHhccchhHHHHhcCCCCCeEEee
Confidence 699999987 4678999999999999999999999984
Q ss_pred ---------------------------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCH---HH
Q psy5985 38 ---------------------------------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSI---KD 75 (153)
Q Consensus 38 ---------------------------------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~---~~ 75 (153)
+||||||||+|||||++||||+|||+|||||.||++ ++
T Consensus 163 kTIDNDl~gTD~TiGfdTA~~~i~eaid~i~~tA~Sh~Rv~iVEvMGR~aG~LAl~aglA~gad~ilIPE~p~~~~~~~~ 242 (762)
T 3o8l_A 163 GSIDNDFCGTDMTIGTDSALHRITEIVDAITTTAQSHQRTFVLEVMGRHCGYLALVTSLSCGADWVFIPECPPDDNWEDH 242 (762)
T ss_dssp BCTTCCCSSCSCCBTHHHHHHHHHHHHHHHHTTCCSSCCEEEEEECCSSCCHHHHHHHHHHTCSBCCCTTSCCCSSCHHH
T ss_pred cCcccCCCCCcCCcCchhHHHHHHHHHHHHHHhhhcCccEEEEEeCCcchhHHHHHHHHhcCCCEEEecCCCCCcchHHH
Confidence 999999999999999999999999999999999997 57
Q ss_pred HHHHHHHHHHHHHcCCCeEEEEEeCCCCCCc----ChHHHHHHHHhhcCCCceeeeeeCCccccCCCCCcc
Q psy5985 76 LQQDLYHMASKMAEGVQRGLILRNEKCNDNY----NTDFIYRLYSEEGKGLFSARQNVLAKHDSAYEEEGM 142 (153)
Q Consensus 76 l~~~i~~i~~~~~~~~~~~iIvvaEG~~~~~----~~~~l~~~~~~e~~~~~~~R~~vLGh~QR~~~p~~~ 142 (153)
+++.++ ++++++++++||+||||+.+.. .++.+++++++ ++++++|+++|||+|||+.||+.
T Consensus 243 ~~~~i~---~~~~~gk~~~iVvVaEGa~d~~G~~i~~~~l~~~i~~--~~g~~~R~tvLGh~QRgg~Psa~ 308 (762)
T 3o8l_A 243 LCRRLS---ETRTRGSRLNIIIVAEGAIDRNGKPITSEGVKDLVVR--RLGYDTRVTVLGHVQRGGTPSAF 308 (762)
T ss_dssp HHHHHH---HHHHTTCSCCBBCEETTCCCSSSCCCCHHHHHHHHHH--HTCCCEEEECCCSSTTCSCCCHH
T ss_pred HHHHHH---HHHHcCCCceEEEEeCCccCCCCCCcHHHHHHHHHHH--HhCCCcceeecCccccCCCCChH
Confidence 776654 4667788999999999997532 46788888876 47899999999999999999874
No 14
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=100.00 E-value=2.5e-38 Score=295.39 Aligned_cols=139 Identities=22% Similarity=0.302 Sum_probs=122.1
Q ss_pred CeecCCCCC---CCcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------------------------
Q psy5985 1 MLGTKRTLP---EKKLPQIAAKLKELKIQALLIIGGFEVS---------------------------------------- 37 (153)
Q Consensus 1 iLgTsR~~~---~e~~~~~~~~L~~~~Id~LvvIGGdgs~---------------------------------------- 37 (153)
+|||||+++ ++++++++++|++++||+||+||||||+
T Consensus 278 iLGTsR~~~f~~~e~~~~~~~~L~~~gId~LvvIGGDGS~~gA~~L~~e~~~l~~eL~~~gkls~~~~~~~~~i~VVGIP 357 (989)
T 3opy_A 278 IIGTARCKEFRERWGRLQACYNMVSNGIDALVVCGGDGSLTGADLFRKEWPELIKELLGEDKITKEQYETHRNLTIVGLV 357 (989)
T ss_dssp SSCCCCSSSTTSHHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHHTTCCCCC--------CHHHHHTTSCEEEEEE
T ss_pred cccCCCCCcccchhHHHHHHHHHHHcCCCEEEEeCCChhhHHHHHHHHHhhHHHHHHHHccccchhhhhccCCCcEEEEe
Confidence 699999987 3568899999999999999999999982
Q ss_pred ---------------------------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHHHH
Q psy5985 38 ---------------------------------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSIKDLQQ 78 (153)
Q Consensus 38 ---------------------------------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~~~l~~ 78 (153)
+||||||||+|||||++||||+|||+|||||.||+++++.+
T Consensus 358 kTIDNDl~gTD~TiGFdTAl~~i~eaId~I~~TA~Sh~RvfVVEVMGR~aG~LAl~agLA~GAd~IlIPE~pf~l~~~~~ 437 (989)
T 3opy_A 358 GSIDNDMCGTDSTIGAYSSLERIIELVDYIDATAASHSRAFVVEVMGRHCGWLGLMSGIATGADYIFIPERPPSESNWKD 437 (989)
T ss_dssp EESSCCCTTCSCCEEHHHHHHHHHHHHHHHHSSCCCTTEEEEEECCCSSCTHHHHHHHHHHTCSEEECTTSCCCTTTHHH
T ss_pred ecccCCCCCCCCCCChhhHHHHHHHHHHHHHhhhhccCceEEEEcCCCchhHHHHHHHHhcCCCEEEeCCCCCChHHHHH
Confidence 99999999999999999999999999999999999988888
Q ss_pred HHHHHHHH-HHcCCCeEEEEEeCCCCCC----cChHHHHHHHHhhcCCCceeeeeeCCccccCCCCCcc
Q psy5985 79 DLYHMASK-MAEGVQRGLILRNEKCNDN----YNTDFIYRLYSEEGKGLFSARQNVLAKHDSAYEEEGM 142 (153)
Q Consensus 79 ~i~~i~~~-~~~~~~~~iIvvaEG~~~~----~~~~~l~~~~~~e~~~~~~~R~~vLGh~QR~~~p~~~ 142 (153)
++..++++ .+++++++|||||||+.+. .+++.+++.+++ .|+++|.++|||+|||+.|++.
T Consensus 438 ~l~~~i~k~~~~Gk~~~IVVVAEGa~~~~~~~i~~~~l~~~l~~---~G~dtR~tvLGHiQRGG~Psa~ 503 (989)
T 3opy_A 438 DLKKVCLRHREKGRRKTTVIVAEGAIDDQLNPITSEEVKDVLVE---IGLDTRITRLGHVQRGGAPCAF 503 (989)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECTTCBCTTSCBCCHHHHHHHHHT---TTCEEEEEECGGGGGCSCCCHH
T ss_pred HHHHHHHHHHhcCCCceEEEEeCCccccccccchHHHHHHHHHH---hCcchhhhhhhHHHcCCCCChh
Confidence 88655544 4567889999999999753 356778887753 6899999999999999999973
No 15
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=100.00 E-value=5.3e-38 Score=277.32 Aligned_cols=136 Identities=16% Similarity=0.160 Sum_probs=114.9
Q ss_pred CeecCCCCCCCcHHHHHHHHHHcCCcEEEEEcCCCCe-------------------------------------------
Q psy5985 1 MLGTKRTLPEKKLPQIAAKLKELKIQALLIIGGFEVS------------------------------------------- 37 (153)
Q Consensus 1 iLgTsR~~~~e~~~~~~~~L~~~~Id~LvvIGGdgs~------------------------------------------- 37 (153)
+|||||+++ +.++++++|++++||+||+||||||+
T Consensus 168 iLGTsR~~~--~~~~i~~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~g~~i~vVGIPkTIDNDl~gTD~T~GFdTAv 245 (487)
T 2hig_A 168 ILGSSRGPQ--DPKEMVDTLERLGVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGVPKTIDNDLSFSHRTFGFQTAV 245 (487)
T ss_dssp SSCCCCSCC--CHHHHHHHHHHHTCSEEEEEECHHHHHHHHHHHHHHHHHTCCCEEEEEECCTTSSCCCSSCCTTHHHHH
T ss_pred eeccCCCCC--CHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHHHHHHHhCCCceEEeccccccCCCCCCCCCCCHHHHH
Confidence 699999985 46799999999999999999999998
Q ss_pred --------------------EEEEEecCCCcCHHHHHHHhhcC-CCEEEEcCCCCCHHHHHHHHHHHHHHHHcCCCeEEE
Q psy5985 38 --------------------FFALKTMGGYCGYLATVAGLAGG-ADAAYIYEEKFSIKDLQQDLYHMASKMAEGVQRGLI 96 (153)
Q Consensus 38 --------------------v~iVEvMGR~aG~LA~~aglA~g-ad~iliPE~~~~~~~l~~~i~~i~~~~~~~~~~~iI 96 (153)
+||||||||+|||||++||||+| ||+|||||.||+++++++.|++ +++ +++++||
T Consensus 246 ~~~~eaId~i~~tA~Sh~~rv~vVEVMGR~aG~LAl~agLA~g~ad~ilIPE~p~~l~~i~~~i~~---r~~-~k~~~II 321 (487)
T 2hig_A 246 EKAVQAIRAAYAEAVSANYGVGVVKLMGRDSGFIAAQAAVASAQANICLVPENPISEQEVMSLLER---RFC-HSRSCVI 321 (487)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEEEEEECCSSCCHHHHHHHHHHTCCSEEECTTSCCCHHHHHHHHHH---HTT-SCSEEEE
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHhhCCCCEEEeCCCCCCHHHHHHHHHH---HHh-cCCcEEE
Confidence 99999999999999999999999 9999999999999999988653 555 6899999
Q ss_pred EEeCCCCCC-----------------cChHHHHHHHHhhc-CCC-----ceeeeeeCCccccCCCCCcc
Q psy5985 97 LRNEKCNDN-----------------YNTDFIYRLYSEEG-KGL-----FSARQNVLAKHDSAYEEEGM 142 (153)
Q Consensus 97 vvaEG~~~~-----------------~~~~~l~~~~~~e~-~~~-----~~~R~~vLGh~QR~~~p~~~ 142 (153)
|||||+... ..++.+++.+++.- ..+ |++|+++|||+|||+.||+.
T Consensus 322 vVaEGag~~~~~~~~~~Da~G~~~l~~i~~~l~~~i~~~~~~~g~~~~~f~~R~~~lGh~QRgg~Psa~ 390 (487)
T 2hig_A 322 IVAEGFGQDWGRGSGGYDASGNKKLIDIGVILTEKVKAFLKANKSRYPDSTVKYIDPSYMIRACPPSAN 390 (487)
T ss_dssp EEETTTTGGGCCC--CBCTTSCBCCCCHHHHHHHHHHHHHHTTTTTSSSCEEEEECCHHHHHSSCCCHH
T ss_pred EEeCCCcccccccccccccccCcchhHHHHHHHHHHHHHHhhcCccccccceEEccCCcCccCCCCCHH
Confidence 999999521 12345666554321 112 38899999999999999974
No 16
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=100.00 E-value=3.7e-36 Score=269.19 Aligned_cols=104 Identities=19% Similarity=0.286 Sum_probs=94.2
Q ss_pred CeecCCCCC--CCcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------------------------
Q psy5985 1 MLGTKRTLP--EKKLPQIAAKLKELKIQALLIIGGFEVS----------------------------------------- 37 (153)
Q Consensus 1 iLgTsR~~~--~e~~~~~~~~L~~~~Id~LvvIGGdgs~----------------------------------------- 37 (153)
+|||||+++ ++++++++++|++++||+||+||||||+
T Consensus 141 iLGssR~~~~~~e~~~~~~~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~~~~i~vIGiPkTIDNDl~~t~id~tiGF 220 (555)
T 2f48_A 141 IVSSGRTKIETEEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKTIDADLRNDHIEISFGF 220 (555)
T ss_dssp TTCCBCCCCCSHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEETTCCCCCSSCCCCEEH
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcHHHHHHHHHHHHHHhCCCCcEEEeccccCCCCCCCcCCCCCCh
Confidence 699999986 4679999999999999999999999998
Q ss_pred ------------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCC----CCHHHHHHHHH-HHHHHHH
Q psy5985 38 ------------------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEK----FSIKDLQQDLY-HMASKMA 88 (153)
Q Consensus 38 ------------------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~----~~~~~l~~~i~-~i~~~~~ 88 (153)
+||||||||+|||||++||||+|||+|||||.| ++++++.+.|. .+.+|..
T Consensus 221 dTA~~~~~~aId~i~~da~s~~~rv~iVEvMGR~aG~lAl~a~LA~gad~ilIPE~~~~~~~~L~~~~~~i~~~i~~r~~ 300 (555)
T 2f48_A 221 DSATKIYSELIGNLCRDAMSTKKYWHFVKLMGRSASHVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSL 300 (555)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCTTSCHHHHHHHHHHCCSEECCHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCcEEEEEeCCcCHHHHHHHHHhhcCCCEEEecCccccccCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999975 78888877773 4556788
Q ss_pred cCCCeEEEEEeCCCCC
Q psy5985 89 EGVQRGLILRNEKCND 104 (153)
Q Consensus 89 ~~~~~~iIvvaEG~~~ 104 (153)
++++++|||||||+.+
T Consensus 301 ~gk~~~IIvVaEG~~~ 316 (555)
T 2f48_A 301 NGDNFGVVIVPEGLIE 316 (555)
T ss_dssp TTCCCEEEEEETTGGG
T ss_pred cCCCcEEEEEeCCCcc
Confidence 8999999999999953
No 17
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=85.48 E-value=0.095 Score=42.06 Aligned_cols=14 Identities=14% Similarity=0.275 Sum_probs=12.7
Q ss_pred CCcEEEEEcCCCCe
Q psy5985 24 KIQALLIIGGFEVS 37 (153)
Q Consensus 24 ~Id~LvvIGGdgs~ 37 (153)
+.|.+|++|||||+
T Consensus 63 ~~D~vi~~GGDGT~ 76 (292)
T 2an1_A 63 QADLAVVVGGDGNM 76 (292)
T ss_dssp HCSEEEECSCHHHH
T ss_pred CCCEEEEEcCcHHH
Confidence 46899999999998
No 18
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=85.14 E-value=0.25 Score=39.55 Aligned_cols=26 Identities=19% Similarity=0.225 Sum_probs=20.8
Q ss_pred cHHHHHHHHHHcCC-------cEEEEEcCCCCe
Q psy5985 12 KLPQIAAKLKELKI-------QALLIIGGFEVS 37 (153)
Q Consensus 12 ~~~~~~~~L~~~~I-------d~LvvIGGdgs~ 37 (153)
..+++.+.|+++++ |.+|++|||||+
T Consensus 16 ~~~~l~~~l~~~g~~v~~~~~D~vv~lGGDGT~ 48 (272)
T 2i2c_A 16 LRLNMIAGFGEYDMEYDDVEPEIVISIGGDGTF 48 (272)
T ss_dssp HHHHHHHHHTTSSCEECSSSCSEEEEEESHHHH
T ss_pred HHHHHHHHHHHCCCEeCCCCCCEEEEEcCcHHH
Confidence 35566777887764 899999999998
No 19
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=79.62 E-value=0.6 Score=38.12 Aligned_cols=25 Identities=24% Similarity=0.410 Sum_probs=21.0
Q ss_pred HHHHHHHHHHcC---------------CcEEEEEcCCCCe
Q psy5985 13 LPQIAAKLKELK---------------IQALLIIGGFEVS 37 (153)
Q Consensus 13 ~~~~~~~L~~~~---------------Id~LvvIGGdgs~ 37 (153)
.+++.+.|++++ .|.+|++|||||+
T Consensus 42 ~~~l~~~L~~~g~~v~~~~~~~~~~~~~DlvIvlGGDGT~ 81 (278)
T 1z0s_A 42 VKRIEEALKRLEVEVELFNQPSEELENFDFIVSVGGDGTI 81 (278)
T ss_dssp HHHHHHHHHHTTCEEEEESSCCGGGGGSSEEEEEECHHHH
T ss_pred HHHHHHHHHHCCCEEEEccccccccCCCCEEEEECCCHHH
Confidence 677888888874 5889999999998
No 20
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=78.83 E-value=0.73 Score=37.64 Aligned_cols=25 Identities=8% Similarity=0.185 Sum_probs=19.0
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCCe
Q psy5985 13 LPQIAAKLKELKIQALLIIGGFEVS 37 (153)
Q Consensus 13 ~~~~~~~L~~~~Id~LvvIGGdgs~ 37 (153)
....++.+...+.|.+|++|||||+
T Consensus 71 ~~~~~~~~~~~~~d~vvv~GGDGTl 95 (332)
T 2bon_A 71 AARYVEEARKFGVATVIAGGGDGTI 95 (332)
T ss_dssp HHHHHHHHHHHTCSEEEEEESHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEccchHH
Confidence 3444555555689999999999997
No 21
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=76.26 E-value=0.81 Score=37.32 Aligned_cols=25 Identities=16% Similarity=0.093 Sum_probs=19.0
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCCe
Q psy5985 13 LPQIAAKLKELKIQALLIIGGFEVS 37 (153)
Q Consensus 13 ~~~~~~~L~~~~Id~LvvIGGdgs~ 37 (153)
....++.+...+.|.++++|||||+
T Consensus 69 a~~~~~~~~~~~~d~vvv~GGDGTv 93 (337)
T 2qv7_A 69 ATLEAERAMHENYDVLIAAGGDGTL 93 (337)
T ss_dssp HHHHHHHHTTTTCSEEEEEECHHHH
T ss_pred HHHHHHHHhhcCCCEEEEEcCchHH
Confidence 3344555556688999999999997
No 22
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=74.43 E-value=0.57 Score=38.08 Aligned_cols=16 Identities=19% Similarity=0.233 Sum_probs=12.6
Q ss_pred HcCCcEEEEEcCCCCe
Q psy5985 22 ELKIQALLIIGGFEVS 37 (153)
Q Consensus 22 ~~~Id~LvvIGGdgs~ 37 (153)
..+.|.+|++|||||+
T Consensus 73 ~~~~d~vi~~GGDGT~ 88 (307)
T 1u0t_A 73 ADGCELVLVLGGDGTF 88 (307)
T ss_dssp ---CCCEEEEECHHHH
T ss_pred ccCCCEEEEEeCCHHH
Confidence 4578999999999998
No 23
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=72.94 E-value=7.5 Score=27.42 Aligned_cols=54 Identities=17% Similarity=0.078 Sum_probs=40.9
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCC--Ce----------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFE--VS----------------------FFALKTMGGYCGYLATVAGLAGGADAAYI 66 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdg--s~----------------------v~iVEvMGR~aG~LA~~aglA~gad~ili 66 (153)
+....+++.|++.+...+++.||+. .+ +||- ++|+.++.-+++.|.-.|++
T Consensus 38 ~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~ad~~I~-----~~G~~t~~Ea~~~G~P~i~~ 112 (170)
T 2o6l_A 38 ERANVIASALAQIPQKVLWRFDGNKPDTLGLNTRLYKWIPQNDLLGHPKTRAFIT-----HGGANGIYEAIYHGIPMVGI 112 (170)
T ss_dssp HHHHHHHHHHTTSSSEEEEECCSSCCTTCCTTEEEESSCCHHHHHTSTTEEEEEE-----CCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHhCCCeEEEEECCcCcccCCCcEEEecCCCHHHHhcCCCcCEEEE-----cCCccHHHHHHHcCCCEEec
Confidence 4577888889888877666666652 11 3442 68999999999999999999
Q ss_pred cCC
Q psy5985 67 YEE 69 (153)
Q Consensus 67 PE~ 69 (153)
|-.
T Consensus 113 p~~ 115 (170)
T 2o6l_A 113 PLF 115 (170)
T ss_dssp CCS
T ss_pred cch
Confidence 974
No 24
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=71.81 E-value=8.3 Score=30.65 Aligned_cols=54 Identities=19% Similarity=0.260 Sum_probs=44.6
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCe-------------------------EEEEEecCCCcCHHHHHHHhhcCCCEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVS-------------------------FFALKTMGGYCGYLATVAGLAGGADAA 64 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~-------------------------v~iVEvMGR~aG~LA~~aglA~gad~i 64 (153)
.+.+..+++.|.+.+...++..|+...- +|| -+|||-++.-+++.|.-++
T Consensus 254 ~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~~v-----~h~G~~s~~Eal~~GvP~v 328 (400)
T 4amg_A 254 IAKLAPLFSEVADVDAEFVLTLGGGDLALLGELPANVRVVEWIPLGALLETCDAII-----HHGGSGTLLTALAAGVPQC 328 (400)
T ss_dssp SSTTHHHHHHGGGSSSEEEEECCTTCCCCCCCCCTTEEEECCCCHHHHHTTCSEEE-----ECCCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHhhccCceEEEEecCccccccccCCCCEEEEeecCHHHHhhhhhhee-----ccCCccHHHHHHHhCCCEE
Confidence 3567888999999999988888876542 544 3899999999999999999
Q ss_pred EEcC
Q psy5985 65 YIYE 68 (153)
Q Consensus 65 liPE 68 (153)
++|-
T Consensus 329 ~~P~ 332 (400)
T 4amg_A 329 VIPH 332 (400)
T ss_dssp ECCC
T ss_pred EecC
Confidence 9985
No 25
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=71.15 E-value=1.3 Score=35.74 Aligned_cols=25 Identities=12% Similarity=0.349 Sum_probs=18.6
Q ss_pred cHHHHHHHHHHcCCcEEEEEcCCCCe
Q psy5985 12 KLPQIAAKLKELKIQALLIIGGFEVS 37 (153)
Q Consensus 12 ~~~~~~~~L~~~~Id~LvvIGGdgs~ 37 (153)
...++++.+.+ +.|.++++|||||+
T Consensus 52 ~a~~~~~~~~~-~~d~vv~~GGDGTl 76 (304)
T 3s40_A 52 DATKYCQEFAS-KVDLIIVFGGDGTV 76 (304)
T ss_dssp HHHHHHHHHTT-TCSEEEEEECHHHH
T ss_pred hHHHHHHHhhc-CCCEEEEEccchHH
Confidence 34455555544 88999999999986
No 26
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=66.93 E-value=1.1 Score=35.39 Aligned_cols=15 Identities=13% Similarity=0.412 Sum_probs=13.6
Q ss_pred cCCcEEEEEcCCCCe
Q psy5985 23 LKIQALLIIGGFEVS 37 (153)
Q Consensus 23 ~~Id~LvvIGGdgs~ 37 (153)
.+.|.+|++|||||+
T Consensus 40 ~~~D~vv~~GGDGTl 54 (258)
T 1yt5_A 40 VTADLIVVVGGDGTV 54 (258)
T ss_dssp BCCSEEEEEECHHHH
T ss_pred CCCCEEEEEeCcHHH
Confidence 468999999999998
No 27
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=64.00 E-value=2.4 Score=35.93 Aligned_cols=15 Identities=20% Similarity=0.317 Sum_probs=13.5
Q ss_pred cCCcEEEEEcCCCCe
Q psy5985 23 LKIQALLIIGGFEVS 37 (153)
Q Consensus 23 ~~Id~LvvIGGdgs~ 37 (153)
.++|.+|++|||||+
T Consensus 107 ~~~DlvI~lGGDGT~ 121 (365)
T 3pfn_A 107 NQIDFIICLGGDGTL 121 (365)
T ss_dssp TTCSEEEEESSTTHH
T ss_pred cCCCEEEEEcChHHH
Confidence 368999999999998
No 28
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=58.80 E-value=17 Score=29.38 Aligned_cols=54 Identities=15% Similarity=0.152 Sum_probs=41.0
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCC------e--------------------EEEEEecCCCcCHHHHHHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEV------S--------------------FFALKTMGGYCGYLATVAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs------~--------------------v~iVEvMGR~aG~LA~~aglA~gad~i 64 (153)
+.+..+++.|++.++..++++|.+.. + +||- +|||.++.-+++.|.-.+
T Consensus 271 ~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~d~~v~-----~~G~~t~~Ea~~~G~P~i 345 (424)
T 2iya_A 271 DFYRTCLSAVDGLDWHVVLSVGRFVDPADLGEVPPNVEVHQWVPQLDILTKASAFIT-----HAGMGSTMEALSNAVPMV 345 (424)
T ss_dssp HHHHHHHHHHTTCSSEEEEECCTTSCGGGGCSCCTTEEEESSCCHHHHHTTCSEEEE-----CCCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhcCCcEEEEEECCcCChHHhccCCCCeEEecCCCHHHHHhhCCEEEE-----CCchhHHHHHHHcCCCEE
Confidence 45667788888878877777775321 1 4443 799999999999999999
Q ss_pred EEcCC
Q psy5985 65 YIYEE 69 (153)
Q Consensus 65 liPE~ 69 (153)
++|-.
T Consensus 346 ~~p~~ 350 (424)
T 2iya_A 346 AVPQI 350 (424)
T ss_dssp ECCCS
T ss_pred EecCc
Confidence 99974
No 29
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=57.65 E-value=1.6 Score=37.13 Aligned_cols=15 Identities=20% Similarity=0.288 Sum_probs=13.6
Q ss_pred cCCcEEEEEcCCCCe
Q psy5985 23 LKIQALLIIGGFEVS 37 (153)
Q Consensus 23 ~~Id~LvvIGGdgs~ 37 (153)
.+.|.+|++|||||+
T Consensus 113 ~~~DlVIvlGGDGTl 127 (388)
T 3afo_A 113 NRTDLLVTLGGDGTI 127 (388)
T ss_dssp HHCSEEEEEESHHHH
T ss_pred cCCCEEEEEeCcHHH
Confidence 458999999999998
No 30
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=51.90 E-value=17 Score=27.88 Aligned_cols=54 Identities=13% Similarity=0.148 Sum_probs=36.1
Q ss_pred ecCCCcCHHHHHHHhhcCCCEEEEcCC--CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC
Q psy5985 43 TMGGYCGYLATVAGLAGGADAAYIYEE--KFSIKDLQQDLYHMASKMAEGVQRGLILRNE 100 (153)
Q Consensus 43 vMGR~aG~LA~~aglA~gad~iliPE~--~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE 100 (153)
--|.+.|.+....+.+.|||.+++|-. ..+.+++.+.++.. ++..-..++.++|
T Consensus 65 ~~ga~tGei~~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a----~~~Gl~~iv~v~~ 120 (219)
T 2h6r_A 65 NPGSHTGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINKC----KNLGLETIVCTNN 120 (219)
T ss_dssp CSBSCTTCCCHHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHH----HHHTCEEEEEESS
T ss_pred hcCCccCchHHHHHHHcCCCEEEECCccccCCHHHHHHHHHHH----HHCCCeEEEEeCC
Confidence 457888999999999999999999853 56666655544432 1212335556665
No 31
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=49.69 E-value=45 Score=26.82 Aligned_cols=53 Identities=9% Similarity=-0.036 Sum_probs=42.3
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCC----e--------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEV----S--------------------FFALKTMGGYCGYLATVAGLAGGADAAYI 66 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs----~--------------------v~iVEvMGR~aG~LA~~aglA~gad~ili 66 (153)
+..+.+++.|++.+.+.+++.|.++. + +||- +|||.++.-+++.|.-.+++
T Consensus 254 ~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~~~~~~~ll~~~d~~v~-----~~G~~t~~Ea~~~G~P~i~~ 328 (416)
T 1rrv_A 254 DAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALFRRVAAVIH-----HGSAGTEHVATRAGVPQLVI 328 (416)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCCHHHHGGGSSEEEE-----CCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCccccccCCCCCEEEeccCChHHHhccCCEEEe-----cCChhHHHHHHHcCCCEEEc
Confidence 34677888899999887777786532 1 5554 89999999999999999999
Q ss_pred cC
Q psy5985 67 YE 68 (153)
Q Consensus 67 PE 68 (153)
|-
T Consensus 329 p~ 330 (416)
T 1rrv_A 329 PR 330 (416)
T ss_dssp CC
T ss_pred cC
Confidence 86
No 32
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=46.80 E-value=25 Score=29.95 Aligned_cols=59 Identities=14% Similarity=0.059 Sum_probs=45.0
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCC------e-------EEEEE--------------ecCCCcCHHHHHHHhhcCCC
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEV------S-------FFALK--------------TMGGYCGYLATVAGLAGGAD 62 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs------~-------v~iVE--------------vMGR~aG~LA~~aglA~gad 62 (153)
.+.+..+++.|++.+...|.++|++.. + +.++. .+=-||||-++.-+++.|.-
T Consensus 288 ~~~~~el~~~l~~~~~~flw~~~~~~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP 367 (454)
T 3hbf_A 288 PHELTALAESLEECGFPFIWSFRGDPKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVP 367 (454)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSCHHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhCCCeEEEEeCCcchhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCC
Confidence 356888999999999999999998531 1 12211 11148999999999999999
Q ss_pred EEEEcC
Q psy5985 63 AAYIYE 68 (153)
Q Consensus 63 ~iliPE 68 (153)
++.+|-
T Consensus 368 ~i~~P~ 373 (454)
T 3hbf_A 368 MISRPF 373 (454)
T ss_dssp EEECCC
T ss_pred EecCcc
Confidence 999996
No 33
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=46.33 E-value=1.1e+02 Score=24.30 Aligned_cols=100 Identities=21% Similarity=0.133 Sum_probs=57.7
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------EEEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS-----------------------FFALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~-----------------------v~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.+-+.++|+|++.|..|-+ -.++=| |.++=.=|. ..+-..|||.+
T Consensus 28 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv-g~~~t~~ai~la~~a~~~Gadav 106 (297)
T 3flu_A 28 EQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT-GANNTVEAIALSQAAEKAGADYT 106 (297)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-CCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC-CCcCHHHHHHHHHHHHHcCCCEE
Confidence 458888999999999999999998876 233333 332221111 12223599987
Q ss_pred EE-cCC--CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC--CCCCCcChHHHHHHH
Q psy5985 65 YI-YEE--KFSIKDLQQDLYHMASKMAEGVQRGLILRNE--KCNDNYNTDFIYRLY 115 (153)
Q Consensus 65 li-PE~--~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE--G~~~~~~~~~l~~~~ 115 (153)
++ |-. +.+.+.+.+..+.+.+. -+--+++-.= -.+...+.+.+.++.
T Consensus 107 lv~~P~y~~~~~~~l~~~f~~va~a----~~lPiilYn~P~~tg~~l~~~~~~~La 158 (297)
T 3flu_A 107 LSVVPYYNKPSQEGIYQHFKTIAEA----TSIPMIIYNVPGRTVVSMTNDTILRLA 158 (297)
T ss_dssp EEECCCSSCCCHHHHHHHHHHHHHH----CCSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHh----CCCCEEEEECCchhccCCCHHHHHHHH
Confidence 65 332 55777887776665432 2334555432 011233456666654
No 34
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=45.96 E-value=30 Score=29.03 Aligned_cols=58 Identities=10% Similarity=0.145 Sum_probs=44.0
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCC-------------eEEEEE------ecC--------CCcCHHHHHHHhhcCCCE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEV-------------SFFALK------TMG--------GYCGYLATVAGLAGGADA 63 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs-------------~v~iVE------vMG--------R~aG~LA~~aglA~gad~ 63 (153)
+.++.+++.|++.+...+.++|.+.. .+.++. ++. -||||-++.-+++.|.-+
T Consensus 287 ~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~ 366 (456)
T 2c1x_A 287 AEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPL 366 (456)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHhcCCeEEEEECCcchhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceE
Confidence 45778888899999999999987531 023322 222 279999999999999999
Q ss_pred EEEcC
Q psy5985 64 AYIYE 68 (153)
Q Consensus 64 iliPE 68 (153)
+++|-
T Consensus 367 i~~P~ 371 (456)
T 2c1x_A 367 ICRPF 371 (456)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 99984
No 35
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=45.95 E-value=77 Score=25.06 Aligned_cols=54 Identities=13% Similarity=0.106 Sum_probs=40.5
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCC-----e--------------------EEEEEecCCCcCHHHHHHHhhcCCCEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEV-----S--------------------FFALKTMGGYCGYLATVAGLAGGADAA 64 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs-----~--------------------v~iVEvMGR~aG~LA~~aglA~gad~i 64 (153)
.+.++.+++.|++.++..+++.||+.. . +|| -++|+.++.-+++.|.-.+
T Consensus 250 ~~~~~~~~~al~~~~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~~v-----~~gG~~t~~Ea~~~G~P~v 324 (398)
T 4fzr_A 250 LSLLQALSQELPKLGFEVVVAVSDKLAQTLQPLPEGVLAAGQFPLSAIMPACDVVV-----HHGGHGTTLTCLSEGVPQV 324 (398)
T ss_dssp CCSHHHHHHHGGGGTCEEEECCCC--------CCTTEEEESCCCHHHHGGGCSEEE-----ECCCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHhCCCEEEEEeCCcchhhhccCCCcEEEeCcCCHHHHHhhCCEEE-----ecCCHHHHHHHHHhCCCEE
Confidence 345888899999988877766666421 1 555 3788999999999999999
Q ss_pred EEcC
Q psy5985 65 YIYE 68 (153)
Q Consensus 65 liPE 68 (153)
.+|-
T Consensus 325 ~~p~ 328 (398)
T 4fzr_A 325 SVPV 328 (398)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 9986
No 36
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=45.94 E-value=30 Score=27.92 Aligned_cols=53 Identities=11% Similarity=0.045 Sum_probs=41.1
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCC----e--------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEV----S--------------------FFALKTMGGYCGYLATVAGLAGGADAAYI 66 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs----~--------------------v~iVEvMGR~aG~LA~~aglA~gad~ili 66 (153)
+..+.+++.|++.+...++++|.++. + +||- +|||.++.-+++.|.-.+++
T Consensus 253 ~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~~~~~~~~l~~~d~~v~-----~~G~~t~~Ea~~~G~P~i~~ 327 (415)
T 1iir_A 253 DAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLFGRVAAVIH-----HGGAGTTHVAARAGAPQILL 327 (415)
T ss_dssp HHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEECSSCCHHHHGGGSSEEEE-----CCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCcccccCCCCCEEEeCcCChHHHHhhCCEEEe-----CCChhHHHHHHHcCCCEEEC
Confidence 34667788899888887777775431 1 5553 79999999999999999999
Q ss_pred cC
Q psy5985 67 YE 68 (153)
Q Consensus 67 PE 68 (153)
|-
T Consensus 328 p~ 329 (415)
T 1iir_A 328 PQ 329 (415)
T ss_dssp CC
T ss_pred CC
Confidence 86
No 37
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=44.98 E-value=59 Score=26.21 Aligned_cols=60 Identities=13% Similarity=0.062 Sum_probs=43.0
Q ss_pred CCCcHHHHHHHHHHcCCcEEEEEcCCCCe-------EEEEE------ec------CCCcCHHHHHHHhhcCCCEEEEcC
Q psy5985 9 PEKKLPQIAAKLKELKIQALLIIGGFEVS-------FFALK------TM------GGYCGYLATVAGLAGGADAAYIYE 68 (153)
Q Consensus 9 ~~e~~~~~~~~L~~~~Id~LvvIGGdgs~-------v~iVE------vM------GR~aG~LA~~aglA~gad~iliPE 68 (153)
+.+..+.+++.|++.++..++..|+++.- +.++. +| =-++|+.++.-+++.|.-.+++|-
T Consensus 234 ~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v~~~~~~~~~~ll~~~d~~v~~gG~~t~~Eal~~GvP~v~~p~ 312 (404)
T 3h4t_A 234 PAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEVNHQVLFGRVAAVVHHGGAGTTTAVTRAGAPQVVVPQ 312 (404)
T ss_dssp CTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTEEEESSCCHHHHGGGSSEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred cHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCEEEecCCCHHHHHhhCcEEEECCcHHHHHHHHHcCCCEEEcCC
Confidence 34568889999999999988877765421 11110 11 157899999999999999999985
No 38
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=43.33 E-value=1.2e+02 Score=24.15 Aligned_cols=100 Identities=19% Similarity=0.176 Sum_probs=58.5
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------EEEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS-----------------------FFALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~-----------------------v~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.|-+.++|+|++.|..|-+ -.++=| |.++=.=+. ..+-..|||.+
T Consensus 36 ~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv-g~~~t~~ai~la~~a~~~Gadav 114 (304)
T 3l21_A 36 ATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGA-GTYDTAHSIRLAKACAAEGAHGL 114 (304)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC-CCSCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEE
Confidence 458888999999999999999998876 233333 333222221 12222599987
Q ss_pred EEcC---CCCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC--CCCCCcChHHHHHHH
Q psy5985 65 YIYE---EKFSIKDLQQDLYHMASKMAEGVQRGLILRNE--KCNDNYNTDFIYRLY 115 (153)
Q Consensus 65 liPE---~~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE--G~~~~~~~~~l~~~~ 115 (153)
++.- .+.+.+.+.+..+.+. +.-+--|++-.= -.+...+.+.+.++.
T Consensus 115 lv~~P~y~~~s~~~l~~~f~~va----~a~~lPiilYn~P~~tg~~l~~~~~~~La 166 (304)
T 3l21_A 115 LVVTPYYSKPPQRGLQAHFTAVA----DATELPMLLYDIPGRSAVPIEPDTIRALA 166 (304)
T ss_dssp EEECCCSSCCCHHHHHHHHHHHH----TSCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred EECCCCCCCCCHHHHHHHHHHHH----HhcCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 6643 2457778877765543 323444555542 011234456676664
No 39
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=42.49 E-value=43 Score=26.68 Aligned_cols=53 Identities=13% Similarity=0.164 Sum_probs=41.6
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCC-----e--------------------EEEEEecCCCcCHHHHHHHhhcCCCEEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEV-----S--------------------FFALKTMGGYCGYLATVAGLAGGADAAY 65 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs-----~--------------------v~iVEvMGR~aG~LA~~aglA~gad~il 65 (153)
+.+..+++.|++.++..+++.||+.. + +|| -++|+.++.-+++.|.-.++
T Consensus 250 ~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~~v-----~~~G~~t~~Eal~~G~P~v~ 324 (398)
T 3oti_A 250 GAVEPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRAVGWTPLHTLLRTCTAVV-----HHGGGGTVMTAIDAGIPQLL 324 (398)
T ss_dssp GGHHHHHHHHHTSSSEEEEECTTSCCGGGCSCCTTEEEESSCCHHHHHTTCSEEE-----ECCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEECCcChhhhccCCCcEEEEccCCHHHHHhhCCEEE-----ECCCHHHHHHHHHhCCCEEE
Confidence 45788889999988887777777541 1 555 36889999999999999999
Q ss_pred EcC
Q psy5985 66 IYE 68 (153)
Q Consensus 66 iPE 68 (153)
+|-
T Consensus 325 ~p~ 327 (398)
T 3oti_A 325 APD 327 (398)
T ss_dssp CCC
T ss_pred cCC
Confidence 986
No 40
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=42.39 E-value=23 Score=28.95 Aligned_cols=53 Identities=4% Similarity=0.009 Sum_probs=40.8
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCC-----e--------------------EEEEEecCCCcCHHHHHHHhhcCCCEEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEV-----S--------------------FFALKTMGGYCGYLATVAGLAGGADAAY 65 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs-----~--------------------v~iVEvMGR~aG~LA~~aglA~gad~il 65 (153)
+.++.+++.|++.+++.+++.||+.- + +||. ++|+.++.-+++.|.-.|+
T Consensus 286 ~~~~~~~~al~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~~V~-----~~G~~t~~Ea~~~G~P~i~ 360 (441)
T 2yjn_A 286 VSIEELLGAVGDVDAEIIATFDAQQLEGVANIPDNVRTVGFVPMHALLPTCAATVH-----HGGPGSWHTAAIHGVPQVI 360 (441)
T ss_dssp CSTTTTHHHHHTSSSEEEECCCTTTTSSCSSCCSSEEECCSCCHHHHGGGCSEEEE-----CCCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEECCcchhhhccCCCCEEEecCCCHHHHHhhCCEEEE-----CCCHHHHHHHHHhCCCEEE
Confidence 44566778888888887777776431 1 6664 7999999999999999999
Q ss_pred EcC
Q psy5985 66 IYE 68 (153)
Q Consensus 66 iPE 68 (153)
+|-
T Consensus 361 ~p~ 363 (441)
T 2yjn_A 361 LPD 363 (441)
T ss_dssp CCC
T ss_pred eCC
Confidence 986
No 41
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=41.67 E-value=1.3e+02 Score=23.75 Aligned_cols=100 Identities=20% Similarity=0.158 Sum_probs=59.0
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------E-EEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS----------------------F-FALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~----------------------v-~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.+-+.++|+|++.|-.|=+ + .++=| |.++=.=|. ..+-+.|||.+
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv-g~~~t~~ai~la~~a~~~Gadav 99 (289)
T 2yxg_A 21 DGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGA-GSNCTEEAIELSVFAEDVGADAV 99 (289)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC-CCSSHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-CCCCHHHHHHHHHHHHhcCCCEE
Confidence 457888999999999999999988876 3 33333 332212121 12233599987
Q ss_pred EE-cCC--CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCC--CCCCcChHHHHHHH
Q psy5985 65 YI-YEE--KFSIKDLQQDLYHMASKMAEGVQRGLILRNEK--CNDNYNTDFIYRLY 115 (153)
Q Consensus 65 li-PE~--~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG--~~~~~~~~~l~~~~ 115 (153)
++ |-. +.+.+.+.+..+.+.+. -+--|++-.== .+...+.+.+.++.
T Consensus 100 lv~~P~y~~~s~~~l~~~f~~ia~a----~~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 100 LSITPYYNKPTQEGLRKHFGKVAES----INLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp EEECCCSSCCCHHHHHHHHHHHHHH----CSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHh----cCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 66 332 45778888877665432 12345554420 11234567777765
No 42
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=41.64 E-value=1.4e+02 Score=24.21 Aligned_cols=100 Identities=16% Similarity=0.187 Sum_probs=59.3
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------EEEEEecCCCc---CHHHHHHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS-----------------------FFALKTMGGYC---GYLATVAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~-----------------------v~iVEvMGR~a---G~LA~~aglA~gad~i 64 (153)
+.+++.++.+-+.++|+|++.|..|=+ -.|+=|-+-+. =.+|- .+-..|||.+
T Consensus 55 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~-~A~~~Gadav 133 (332)
T 2r8w_A 55 EAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAK-DAEAAGADAL 133 (332)
T ss_dssp HHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHH-HHHHHTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHH-HHHhcCCCEE
Confidence 358888999999999999999988876 23333333121 11222 2233599988
Q ss_pred EEcCC---CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCC--CCCCcChHHHHHHH
Q psy5985 65 YIYEE---KFSIKDLQQDLYHMASKMAEGVQRGLILRNEK--CNDNYNTDFIYRLY 115 (153)
Q Consensus 65 liPE~---~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG--~~~~~~~~~l~~~~ 115 (153)
++.-. +.+.+.+.+..+.+.+. -+--|++-.== .+...+.+.+.++.
T Consensus 134 lv~~P~Y~~~s~~~l~~~f~~VA~a----~~lPiilYn~P~~tg~~l~~e~~~~La 185 (332)
T 2r8w_A 134 LLAPVSYTPLTQEEAYHHFAAVAGA----TALPLAIYNNPTTTRFTFSDELLVRLA 185 (332)
T ss_dssp EECCCCSSCCCHHHHHHHHHHHHHH----CSSCEEEECCHHHHCCCCCHHHHHHHH
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHh----cCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 76432 45778888777665432 22345554410 11234567777764
No 43
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=41.62 E-value=1.3e+02 Score=23.90 Aligned_cols=100 Identities=19% Similarity=0.123 Sum_probs=58.0
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------E-EEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS----------------------F-FALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~----------------------v-~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.+-+.++|+|++.|..|=+ + .|+=| |.++=.=|. ..+-..|||.+
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv-g~~~t~~ai~la~~A~~~Gadav 111 (301)
T 1xky_A 33 AKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT-GSNNTHASIDLTKKATEVGVDAV 111 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-CCSCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC-CCCCHHHHHHHHHHHHhcCCCEE
Confidence 358888999999999999999988876 2 33333 322212121 12233699987
Q ss_pred EE-cCC--CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCC--CCCCcChHHHHHHH
Q psy5985 65 YI-YEE--KFSIKDLQQDLYHMASKMAEGVQRGLILRNEK--CNDNYNTDFIYRLY 115 (153)
Q Consensus 65 li-PE~--~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG--~~~~~~~~~l~~~~ 115 (153)
++ |-. +.+.+.+.+..+.+.+ .-+--|++-.== .....+.+.+.++.
T Consensus 112 lv~~P~y~~~s~~~l~~~f~~va~----a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (301)
T 1xky_A 112 MLVAPYYNKPSQEGMYQHFKAIAE----STPLPVMLYNVPGRSIVQISVDTVVRLS 163 (301)
T ss_dssp EEECCCSSCCCHHHHHHHHHHHHH----TCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred EEcCCCCCCCCHHHHHHHHHHHHH----hcCCCEEEEeCccccCCCCCHHHHHHHH
Confidence 66 332 4577888777665432 223345554421 11234456666664
No 44
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=41.54 E-value=38 Score=28.41 Aligned_cols=58 Identities=19% Similarity=0.146 Sum_probs=43.2
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCC------Ce-----------EEEEE------ecC--------CCcCHHHHHHHhhc
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFE------VS-----------FFALK------TMG--------GYCGYLATVAGLAG 59 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdg------s~-----------v~iVE------vMG--------R~aG~LA~~aglA~ 59 (153)
+.+..+++.|++.+...|.++|.+. .+ +.|+. ++. -||||-++.-+++.
T Consensus 311 ~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~ 390 (482)
T 2pq6_A 311 EQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICA 390 (482)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHc
Confidence 4578889999999999999998541 01 12211 111 28999999999999
Q ss_pred CCCEEEEcC
Q psy5985 60 GADAAYIYE 68 (153)
Q Consensus 60 gad~iliPE 68 (153)
|.-++.+|-
T Consensus 391 GvP~i~~P~ 399 (482)
T 2pq6_A 391 GVPMLCWPF 399 (482)
T ss_dssp TCCEEECCC
T ss_pred CCCEEecCc
Confidence 999999985
No 45
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=40.83 E-value=53 Score=22.96 Aligned_cols=32 Identities=13% Similarity=0.103 Sum_probs=28.4
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+++.|.+++++++.|+-.+|.++-+|
T Consensus 34 ~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGii 65 (170)
T 4esy_A 34 DDTLDAVAKTMLEHQIGCAPVVDQNGHLVGII 65 (170)
T ss_dssp TSBHHHHHHHHHHTTCSEEEEECTTSCEEEEE
T ss_pred cCcHHHHHHHHHHcCCeEEEEEcCCccEEEEE
Confidence 45689999999999999999999999886666
No 46
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=40.62 E-value=1.2e+02 Score=24.03 Aligned_cols=100 Identities=21% Similarity=0.158 Sum_probs=57.8
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------EEEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS-----------------------FFALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~-----------------------v~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.+-+.++|+|++.|-.|=+ -.++=| |.++=.=|. ..+-..|||.+
T Consensus 23 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv-g~~~t~~ai~la~~a~~~Gadav 101 (292)
T 3daq_A 23 EALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGT-GTNDTEKSIQASIQAKALGADAI 101 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-CCSCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC-CcccHHHHHHHHHHHHHcCCCEE
Confidence 457888999999999999999988876 223322 322222221 11222599986
Q ss_pred EEc-C--CCCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC--CCCCCcChHHHHHHH
Q psy5985 65 YIY-E--EKFSIKDLQQDLYHMASKMAEGVQRGLILRNE--KCNDNYNTDFIYRLY 115 (153)
Q Consensus 65 liP-E--~~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE--G~~~~~~~~~l~~~~ 115 (153)
++. - .+.+.+.+.+..+.+.+.. +--|++-.= -.+...+.+.+.++.
T Consensus 102 lv~~P~y~~~~~~~l~~~f~~ia~a~----~lPiilYn~P~~tg~~l~~~~~~~La 153 (292)
T 3daq_A 102 MLITPYYNKTNQRGLVKHFEAIADAV----KLPVVLYNVPSRTNMTIEPETVEILS 153 (292)
T ss_dssp EEECCCSSCCCHHHHHHHHHHHHHHH----CSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHhC----CCCEEEEecccccCCCCCHHHHHHHh
Confidence 653 3 2567788888777665432 233554431 012234556676664
No 47
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=39.65 E-value=1.4e+02 Score=23.57 Aligned_cols=100 Identities=25% Similarity=0.187 Sum_probs=56.8
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------EEEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS-----------------------FFALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~-----------------------v~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.+-+.++|+|++.|..|=+ -.++=| |.++=.=|. ..+-..|||.+
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv-g~~~t~~ai~la~~a~~~Gadav 100 (291)
T 3tak_A 22 KSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT-GANSTREAIELTKAAKDLGADAA 100 (291)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-CCSSHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC-CCCCHHHHHHHHHHHHhcCCCEE
Confidence 458888999999999999999998865 223322 322222111 12223599987
Q ss_pred EEc-CC--CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC--CCCCCcChHHHHHHH
Q psy5985 65 YIY-EE--KFSIKDLQQDLYHMASKMAEGVQRGLILRNE--KCNDNYNTDFIYRLY 115 (153)
Q Consensus 65 liP-E~--~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE--G~~~~~~~~~l~~~~ 115 (153)
++. -. +.+.+.+.+..+.+.+. -+--+++-.= -.+...+.+.+.++.
T Consensus 101 lv~~P~y~~~~~~~l~~~f~~ia~a----~~lPiilYn~P~~tg~~l~~~~~~~La 152 (291)
T 3tak_A 101 LLVTPYYNKPTQEGLYQHYKAIAEA----VELPLILYNVPGRTGVDLSNDTAVRLA 152 (291)
T ss_dssp EEECCCSSCCCHHHHHHHHHHHHHH----CCSCEEEEECHHHHSCCCCHHHHHHHT
T ss_pred EEcCCCCCCCCHHHHHHHHHHHHHh----cCCCEEEEecccccCCCCCHHHHHHHH
Confidence 653 22 55778888776665432 2334555432 011233455666653
No 48
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=39.18 E-value=1.1e+02 Score=24.42 Aligned_cols=101 Identities=9% Similarity=0.133 Sum_probs=60.2
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------EEEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS-----------------------FFALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~-----------------------v~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.+-+.++|+|++.|..|-+ -.++=| |.++=.=|. ..+-..|||.+
T Consensus 29 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv-g~~~t~~ai~la~~A~~~Gadav 107 (309)
T 3fkr_A 29 ASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT-SHYSTQVCAARSLRAQQLGAAMV 107 (309)
T ss_dssp HHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-CCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec-CCchHHHHHHHHHHHHHcCCCEE
Confidence 458888999999999999999988876 223333 332222221 12223599997
Q ss_pred EEc-CC-----CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC-CCCCCcChHHHHHHHH
Q psy5985 65 YIY-EE-----KFSIKDLQQDLYHMASKMAEGVQRGLILRNE-KCNDNYNTDFIYRLYS 116 (153)
Q Consensus 65 liP-E~-----~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE-G~~~~~~~~~l~~~~~ 116 (153)
++. -. +.+.+.+.+..+.+.+. -+--|++-.= +.....+.+.+.++.+
T Consensus 108 lv~~Pyy~~~~~~s~~~l~~~f~~va~a----~~lPiilYn~P~tg~~l~~~~~~~La~ 162 (309)
T 3fkr_A 108 MAMPPYHGATFRVPEAQIFEFYARVSDA----IAIPIMVQDAPASGTALSAPFLARMAR 162 (309)
T ss_dssp EECCSCBTTTBCCCHHHHHHHHHHHHHH----CSSCEEEEECGGGCCCCCHHHHHHHHH
T ss_pred EEcCCCCccCCCCCHHHHHHHHHHHHHh----cCCCEEEEeCCCCCCCCCHHHHHHHHh
Confidence 763 22 44778888877665432 2334555442 1233455677777654
No 49
>1cz3_A Dihydrofolate reductase; dimer, hyperthermophIle, oxidoreductase; 2.10A {Thermotoga maritima} SCOP: c.71.1.1 PDB: 1d1g_A*
Probab=38.45 E-value=28 Score=25.11 Aligned_cols=24 Identities=17% Similarity=0.246 Sum_probs=21.6
Q ss_pred cHHHHHHHHHHcCCcEEEEEcCCC
Q psy5985 12 KLPQIAAKLKELKIQALLIIGGFE 35 (153)
Q Consensus 12 ~~~~~~~~L~~~~Id~LvvIGGdg 35 (153)
+.+.+++.|++.+++-++|+||-.
T Consensus 81 ~l~~~l~~l~~~~~~~i~v~GG~~ 104 (168)
T 1cz3_A 81 SPADVVKFLEGKGYERVAVIGGKT 104 (168)
T ss_dssp CHHHHHHHHHHTTCSEEEEEECHH
T ss_pred CHHHHHHHHHhCCCCEEEEECCHH
Confidence 688899999999999999999954
No 50
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=38.15 E-value=1.3e+02 Score=24.21 Aligned_cols=101 Identities=15% Similarity=0.103 Sum_probs=58.8
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------EEEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS-----------------------FFALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~-----------------------v~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.|-+.++|+|++.|-.|-+ -.++ =-|.++=.=+. ..+-..|||.+
T Consensus 43 ~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia-Gvg~~st~~ai~la~~A~~~Gadav 121 (315)
T 3si9_A 43 KAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA-GAGSNSTSEAVELAKHAEKAGADAV 121 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE-ECCCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEE-eCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 458888999999999999999988876 2222 22332221111 12233599987
Q ss_pred EEcC---CCCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC--CCCCCcChHHHHHHHH
Q psy5985 65 YIYE---EKFSIKDLQQDLYHMASKMAEGVQRGLILRNE--KCNDNYNTDFIYRLYS 116 (153)
Q Consensus 65 liPE---~~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE--G~~~~~~~~~l~~~~~ 116 (153)
++.- .+.+.+.+.+..+.+.+. -+--|++-.= -.+...+.+.+.++.+
T Consensus 122 lv~~P~y~~~~~~~l~~~f~~va~a----~~lPiilYn~P~~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 122 LVVTPYYNRPNQRGLYTHFSSIAKA----ISIPIIIYNIPSRSVIDMAVETMRDLCR 174 (315)
T ss_dssp EEECCCSSCCCHHHHHHHHHHHHHH----CSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHc----CCCCEEEEeCchhhCCCCCHHHHHHHHh
Confidence 6543 245777887776665432 2334555442 0122345667777654
No 51
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=37.15 E-value=1.6e+02 Score=23.55 Aligned_cols=103 Identities=7% Similarity=0.037 Sum_probs=58.8
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------EEEEEecCCCcCHHHH---HHHhhcCCCEEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS----------------------FFALKTMGGYCGYLAT---VAGLAGGADAAY 65 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~----------------------v~iVEvMGR~aG~LA~---~aglA~gad~il 65 (153)
+.+++.++.+-+.++|+|++.|..|=+ -.|+= -|.++=.=|. ..+-..|||.++
T Consensus 29 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaG-vg~~~t~~ai~la~~A~~~Gadavl 107 (313)
T 3dz1_A 29 VSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVG-VSAPGFAAMRRLARLSMDAGAAGVM 107 (313)
T ss_dssp HHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEE-CCCSSHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEe-cCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 458888999999999999999988875 12222 2222211111 122225999877
Q ss_pred E--cCCCCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC--CCCCCcChHHHHHHHH
Q psy5985 66 I--YEEKFSIKDLQQDLYHMASKMAEGVQRGLILRNE--KCNDNYNTDFIYRLYS 116 (153)
Q Consensus 66 i--PE~~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE--G~~~~~~~~~l~~~~~ 116 (153)
+ |=.+.+.+.+.+..+.+.+... .+--|++-.= -.....+.+.+.++.+
T Consensus 108 v~~P~~~~s~~~l~~~f~~va~a~~--~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (313)
T 3dz1_A 108 IAPPPSLRTDEQITTYFRQATEAIG--DDVPWVLQDYPLTLSVVMTPKVIRQIVM 160 (313)
T ss_dssp ECCCTTCCSHHHHHHHHHHHHHHHC--TTSCEEEEECHHHHCCCCCHHHHHHHHH
T ss_pred ECCCCCCCCHHHHHHHHHHHHHhCC--CCCcEEEEeCccccCcCCCHHHHHHHHH
Confidence 6 3334467788877776654321 0133555442 0122345677777654
No 52
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=36.73 E-value=24 Score=28.69 Aligned_cols=32 Identities=19% Similarity=0.273 Sum_probs=26.5
Q ss_pred cCCCCCCCcHHHHHHHHHHcCCcEEEEEcCCC
Q psy5985 4 TKRTLPEKKLPQIAAKLKELKIQALLIIGGFE 35 (153)
Q Consensus 4 TsR~~~~e~~~~~~~~L~~~~Id~LvvIGGdg 35 (153)
|||....+.++..+..++..+|+-++++.||-
T Consensus 79 tc~~~~~~~l~~~L~~~~~~GI~niLaLrGD~ 110 (310)
T 3apt_A 79 TVAGQSRKEVAEVLHRFVESGVENLLALRGDP 110 (310)
T ss_dssp ECTTSCHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred ecCCCCHHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 55654456688888999999999999999995
No 53
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=36.43 E-value=97 Score=23.88 Aligned_cols=80 Identities=10% Similarity=0.103 Sum_probs=41.9
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCCeEEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHHH-HHHHHHHHHHHcCC
Q psy5985 13 LPQIAAKLKELKIQALLIIGGFEVSFFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSIKDLQ-QDLYHMASKMAEGV 91 (153)
Q Consensus 13 ~~~~~~~L~~~~Id~LvvIGGdgs~v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~~~l~-~~i~~i~~~~~~~~ 91 (153)
.+++.+.|+..+++.+. +.. +-+.-|...=-++++.+++..|+++++=|..-.+|.-. +.+..+.+++.+..
T Consensus 106 ~~~~~~~l~~~~l~~~~-----~~~--~~~LSgGq~qrv~lAraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~~ 178 (253)
T 2nq2_C 106 YQVAMQALDYLNLTHLA-----KRE--FTSLSGGQRQLILIARAIASECKLILLDEPTSALDLANQDIVLSLLIDLAQSQ 178 (253)
T ss_dssp HHHHHHHHHHTTCGGGT-----TSB--GGGSCHHHHHHHHHHHHHHTTCSEEEESSSSTTSCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCChHHh-----cCC--hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc
Confidence 34566777777775321 000 00111222226788999999999999988643333221 22223334444332
Q ss_pred CeEEEEEe
Q psy5985 92 QRGLILRN 99 (153)
Q Consensus 92 ~~~iIvva 99 (153)
+..+|+++
T Consensus 179 g~tvi~vt 186 (253)
T 2nq2_C 179 NMTVVFTT 186 (253)
T ss_dssp CCEEEEEE
T ss_pred CCEEEEEe
Confidence 44566555
No 54
>3jtw_A Dihydrofolate reductase; YP_805003.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 1.90A {Pediococcus pentosaceus atcc 25745}
Probab=36.11 E-value=27 Score=25.56 Aligned_cols=25 Identities=16% Similarity=0.365 Sum_probs=22.1
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCC
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFE 35 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdg 35 (153)
.+...+++.|++.+++-++++||-.
T Consensus 96 ~~l~~~l~~l~~~~~~~i~v~GG~~ 120 (178)
T 3jtw_A 96 QSPVELVKRIQKEKGKDVWIVGGAK 120 (178)
T ss_dssp SCHHHHHHHHHTSSCCEEEEEECHH
T ss_pred CCHHHHHHHHHhCCCCEEEEEChHH
Confidence 4788999999999999999999954
No 55
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=36.08 E-value=1.6e+02 Score=23.26 Aligned_cols=103 Identities=14% Similarity=0.074 Sum_probs=59.5
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------EEEEEecCCC---cCHHHHHHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS-----------------------FFALKTMGGY---CGYLATVAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~-----------------------v~iVEvMGR~---aG~LA~~aglA~gad~i 64 (153)
+.+++.++.|-+.++|+|++.|..|=+ -.|+=|-+-+ +=.+|-+ +-..|||.+
T Consensus 24 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~-A~~~Gadav 102 (294)
T 3b4u_A 24 DAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAE-ALNAGARNI 102 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHH-HHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHH-HHhcCCCEE
Confidence 458889999999999999999988876 2333333311 1112212 223599987
Q ss_pred EEcCC---C-CCHHHHHHHHHHHHHHHHcCCCeEEEEEeC--CCCCCcChHHHHHHH
Q psy5985 65 YIYEE---K-FSIKDLQQDLYHMASKMAEGVQRGLILRNE--KCNDNYNTDFIYRLY 115 (153)
Q Consensus 65 liPE~---~-~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE--G~~~~~~~~~l~~~~ 115 (153)
++.-. + .+.+.+.+..+.+.+..-+ .+--|++-.= -.+...+.+.+.++.
T Consensus 103 lv~~P~y~~~~s~~~l~~~f~~va~a~p~-~~lPiilYn~P~~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 103 LLAPPSYFKNVSDDGLFAWFSAVFSKIGK-DARDILVYNIPSVTMVTLSVELVGRLK 158 (294)
T ss_dssp EECCCCSSCSCCHHHHHHHHHHHHHHHCT-TCCCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EEcCCcCCCCCCHHHHHHHHHHHHHhcCC-CCCcEEEEECcchhCcCCCHHHHHHHH
Confidence 76422 4 5778888877766543200 0223555442 112234567777765
No 56
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=35.99 E-value=43 Score=26.84 Aligned_cols=53 Identities=17% Similarity=0.135 Sum_probs=36.9
Q ss_pred CcHHHHHHHHHHc-CCcEEEEEcCCCC------e--------------------EEEEEecCCCcCHHHHHHHhhcCCCE
Q psy5985 11 KKLPQIAAKLKEL-KIQALLIIGGFEV------S--------------------FFALKTMGGYCGYLATVAGLAGGADA 63 (153)
Q Consensus 11 e~~~~~~~~L~~~-~Id~LvvIGGdgs------~--------------------v~iVEvMGR~aG~LA~~aglA~gad~ 63 (153)
+.+..+++.|++. ++..++++|.... + +||. ++||.++.-+++.|.-.
T Consensus 248 ~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~~~~~~v~~~~~~~~~~~l~~ad~~v~-----~~G~~t~~Ea~~~G~P~ 322 (430)
T 2iyf_A 248 AFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQLAILRQADLFVT-----HAGAGGSQEGLATATPM 322 (430)
T ss_dssp HHHHHHHHHHTTCTTEEEEEECC---CGGGGCSCCTTEEEESSCCHHHHHTTCSEEEE-----CCCHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCChHHhccCCCCeEEEecCCHHHHhhccCEEEE-----CCCccHHHHHHHhCCCE
Confidence 3466677778775 6666666664211 1 5554 78999999999999999
Q ss_pred EEEcC
Q psy5985 64 AYIYE 68 (153)
Q Consensus 64 iliPE 68 (153)
|.+|-
T Consensus 323 i~~p~ 327 (430)
T 2iyf_A 323 IAVPQ 327 (430)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99986
No 57
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=35.83 E-value=1.5e+02 Score=23.77 Aligned_cols=100 Identities=23% Similarity=0.213 Sum_probs=57.2
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------EEEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS-----------------------FFALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~-----------------------v~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.+-+.++|+|++.|..|-+ -.++=| |.++=.=+. ..+-+.|||.+
T Consensus 44 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv-g~~st~eai~la~~A~~~Gadav 122 (314)
T 3qze_A 44 DSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT-GANSTREAVALTEAAKSGGADAC 122 (314)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC-CCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-CCcCHHHHHHHHHHHHHcCCCEE
Confidence 458888899999999999999988876 223322 222211111 12223599987
Q ss_pred EEcC---CCCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC--CCCCCcChHHHHHHH
Q psy5985 65 YIYE---EKFSIKDLQQDLYHMASKMAEGVQRGLILRNE--KCNDNYNTDFIYRLY 115 (153)
Q Consensus 65 liPE---~~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE--G~~~~~~~~~l~~~~ 115 (153)
++.- .+.+.+.+.+..+.+.+. -+--|++-.= -.+...+.+.+.++.
T Consensus 123 lv~~P~y~~~s~~~l~~~f~~va~a----~~lPiilYn~P~~tg~~l~~~~~~~La 174 (314)
T 3qze_A 123 LLVTPYYNKPTQEGMYQHFRHIAEA----VAIPQILYNVPGRTSCDMLPETVERLS 174 (314)
T ss_dssp EEECCCSSCCCHHHHHHHHHHHHHH----SCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EEcCCCCCCCCHHHHHHHHHHHHHh----cCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 6542 255777887776665432 2334555442 011234456666654
No 58
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=35.32 E-value=26 Score=28.54 Aligned_cols=33 Identities=18% Similarity=0.082 Sum_probs=27.2
Q ss_pred cCCCCCCCcHHHHHHHHHHcCCcEEEEEcCCCC
Q psy5985 4 TKRTLPEKKLPQIAAKLKELKIQALLIIGGFEV 36 (153)
Q Consensus 4 TsR~~~~e~~~~~~~~L~~~~Id~LvvIGGdgs 36 (153)
|||....+.++..+..++..+|+-++++.||-.
T Consensus 90 tc~~~~~~~l~~~L~~~~~~GI~nILaLrGDpp 122 (304)
T 3fst_A 90 TCIDATPDELRTIARDYWNNGIRHIVALRGDLP 122 (304)
T ss_dssp ESTTSCHHHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred ecCCCCHHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 556554567888889999999999999999964
No 59
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=35.21 E-value=1.2e+02 Score=24.36 Aligned_cols=98 Identities=14% Similarity=0.033 Sum_probs=61.6
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------EEEEEecCCCcCHH-HH-HHHhhcCCCEEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS-----------------------FFALKTMGGYCGYL-AT-VAGLAGGADAAY 65 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~-----------------------v~iVEvMGR~aG~L-A~-~aglA~gad~il 65 (153)
+.+++.++.|-+.++|+|++.|-.|=+ -.|+=|-+ +.-.- .+ ..+-..|||.++
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A~~~Gadavl 111 (314)
T 3d0c_A 33 KGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY-SVDTAIELGKSAIDSGADCVM 111 (314)
T ss_dssp HHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHHHHcCCCEEE
Confidence 458889999999999999999987765 34444433 22211 11 112335999987
Q ss_pred EcCC---CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCCCCCCcChHHHHHHH
Q psy5985 66 IYEE---KFSIKDLQQDLYHMASKMAEGVQRGLILRNEKCNDNYNTDFIYRLY 115 (153)
Q Consensus 66 iPE~---~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG~~~~~~~~~l~~~~ 115 (153)
+.-. +.+.+.+.+..+.+.+. -+--|++-. -... .+.+.+.++.
T Consensus 112 v~~P~y~~~s~~~l~~~f~~va~a----~~lPiilYn-~tg~-l~~~~~~~La 158 (314)
T 3d0c_A 112 IHQPVHPYITDAGAVEYYRNIIEA----LDAPSIIYF-KDAH-LSDDVIKELA 158 (314)
T ss_dssp ECCCCCSCCCHHHHHHHHHHHHHH----SSSCEEEEE-CCTT-SCTHHHHHHT
T ss_pred ECCCCCCCCCHHHHHHHHHHHHHh----CCCCEEEEe-CCCC-cCHHHHHHHH
Confidence 7432 45778888777665432 234577777 4444 6667777764
No 60
>2qai_A V-type ATP synthase subunit F; VATF_pyrfu, ATPF, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Pyrococcus furiosus}
Probab=35.20 E-value=51 Score=22.97 Aligned_cols=39 Identities=28% Similarity=0.364 Sum_probs=29.0
Q ss_pred cCCCEEEE-cCCCCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCC
Q psy5985 59 GGADAAYI-YEEKFSIKDLQQDLYHMASKMAEGVQRGLILRNEK 101 (153)
Q Consensus 59 ~gad~ili-PE~~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG 101 (153)
.|.+.+++ .+.+.+.+++.+.+++ +.++++.+||+++|.
T Consensus 18 aGi~~~~v~~~~~t~~ee~~~~~~~----l~~~~digIIlIte~ 57 (111)
T 2qai_A 18 AGVHEAYEYDESLESVERARNKLRE----LLERDDVGIILITER 57 (111)
T ss_dssp HTCSEEEECCSSHHHHHHHHHHHHH----HHTCTTEEEEEEEHH
T ss_pred cCCceEEEecCCCCCHHHHHHHHHH----HhhCCCeEEEEEcHH
Confidence 58888888 5666777777776554 445678999999975
No 61
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=34.87 E-value=1.2e+02 Score=24.29 Aligned_cols=101 Identities=13% Similarity=0.132 Sum_probs=58.6
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------EEEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS-----------------------FFALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~-----------------------v~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.|-+.++|+|++.|-.|=+ -.|+=| |.++=.=|. ..+-..|||.+
T Consensus 45 ~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv-g~~~t~~ai~la~~A~~~Gadav 123 (315)
T 3na8_A 45 PALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV-SDLTTAKTVRRAQFAESLGAEAV 123 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC-CCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec-CCCCHHHHHHHHHHHHhcCCCEE
Confidence 458888999999999999999988775 222222 322211111 12233599997
Q ss_pred EEcCC---CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC--CCCCCcChHHHHHHHH
Q psy5985 65 YIYEE---KFSIKDLQQDLYHMASKMAEGVQRGLILRNE--KCNDNYNTDFIYRLYS 116 (153)
Q Consensus 65 liPE~---~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE--G~~~~~~~~~l~~~~~ 116 (153)
++.-. +.+.+.+.+..+.+.+. -+--|++-.= -.....+.+.+.++..
T Consensus 124 lv~~P~y~~~s~~~l~~~f~~va~a----~~lPiilYn~P~~tg~~l~~~~~~~L~a 176 (315)
T 3na8_A 124 MVLPISYWKLNEAEVFQHYRAVGEA----IGVPVMLYNNPGTSGIDMSVELILRIVR 176 (315)
T ss_dssp EECCCCSSCCCHHHHHHHHHHHHHH----CSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHh----CCCcEEEEeCcchhCcCCCHHHHHHHHh
Confidence 76432 55778888777665432 1234555441 0122345677777633
No 62
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=34.26 E-value=88 Score=23.51 Aligned_cols=49 Identities=14% Similarity=0.194 Sum_probs=29.7
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCCHHHH-HHHHHHHHHHHHcCCCeEEEEEe
Q psy5985 50 YLATVAGLAGGADAAYIYEEKFSIKDL-QQDLYHMASKMAEGVQRGLILRN 99 (153)
Q Consensus 50 ~LA~~aglA~gad~iliPE~~~~~~~l-~~~i~~i~~~~~~~~~~~iIvva 99 (153)
-+|++.+++..|+++++=|..-.+|.. .+.+..+.+++.+. +..+|+++
T Consensus 148 rv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~-g~tvi~vt 197 (224)
T 2pcj_A 148 RVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEG-GTSIVMVT 197 (224)
T ss_dssp HHHHHHHTTTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHT-TCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEc
Confidence 568889999999999998864333322 22233334445433 55666665
No 63
>2gd9_A Hypothetical protein YYAP; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=34.24 E-value=33 Score=25.03 Aligned_cols=24 Identities=21% Similarity=0.281 Sum_probs=21.0
Q ss_pred cHHHHHHHHHHcCCcEEEEEcCCC
Q psy5985 12 KLPQIAAKLKELKIQALLIIGGFE 35 (153)
Q Consensus 12 ~~~~~~~~L~~~~Id~LvvIGGdg 35 (153)
+.+.+++.|++.+++-++|+||-.
T Consensus 106 ~l~~~l~~L~~~~~~~i~v~GG~~ 129 (189)
T 2gd9_A 106 NILEEVNKLKKNPGKDIWLYGGAS 129 (189)
T ss_dssp HHHHHHHHHHHSCCSEEEEEECHH
T ss_pred CHHHHHHHHHhCCCCeEEEEChHH
Confidence 577889999999999999999954
No 64
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=34.15 E-value=1.8e+02 Score=23.74 Aligned_cols=100 Identities=16% Similarity=0.134 Sum_probs=58.1
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------E-EEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS----------------------F-FALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~----------------------v-~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.|-+.++|+|++.|-.|=+ + .|+=|-+ ++=.=|. ..+-+.|||.+
T Consensus 52 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~-~st~eai~la~~A~~~Gadav 130 (343)
T 2v9d_A 52 PGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGG-TNARETIELSQHAQQAGADGI 130 (343)
T ss_dssp HHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCS-SCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHHHHHHHHhcCCCEE
Confidence 358888999999999999999988876 2 3333332 2211111 11233599987
Q ss_pred EE-cCC--CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC--CCCCCcChHHHHHHH
Q psy5985 65 YI-YEE--KFSIKDLQQDLYHMASKMAEGVQRGLILRNE--KCNDNYNTDFIYRLY 115 (153)
Q Consensus 65 li-PE~--~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE--G~~~~~~~~~l~~~~ 115 (153)
++ |-. +.+.+.+.+..+.+.+ .-+--|++-.= -.....+.+.+.++.
T Consensus 131 lv~~P~Y~~~s~~~l~~~f~~VA~----a~~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 131 VVINPYYWKVSEANLIRYFEQVAD----SVTLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp EEECCSSSCCCHHHHHHHHHHHHH----TCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred EECCCCCCCCCHHHHHHHHHHHHH----hcCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 65 332 4577888877665432 22334555442 011234556777764
No 65
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=34.10 E-value=61 Score=25.58 Aligned_cols=54 Identities=17% Similarity=0.062 Sum_probs=39.4
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe--------------------------EEEEEecCCCcCHHHHHHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS--------------------------FFALKTMGGYCGYLATVAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~--------------------------v~iVEvMGR~aG~LA~~aglA~gad~i 64 (153)
+.+..+++.|++.++..+++.|+.... +|| -++|+.++.-+++.|.-.|
T Consensus 258 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~~~~~v~~~~~~~~~~~l~~ad~~v-----~~~g~~t~~Ea~a~G~P~v 332 (412)
T 3otg_A 258 EVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWVPQAALLPHVDLVV-----HHGGSGTTLGALGAGVPQL 332 (412)
T ss_dssp HHHHHHHHHHHTSSSEEEEECCSSCCCTTCCCCCTTEEEESCCCHHHHGGGCSEEE-----ESCCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHcCCCEEEEEECCCCChhhhccCCCcEEEeCCCCHHHHHhcCcEEE-----ECCchHHHHHHHHhCCCEE
Confidence 457778888888887766666654411 555 2578888889999999999
Q ss_pred EEcCC
Q psy5985 65 YIYEE 69 (153)
Q Consensus 65 liPE~ 69 (153)
.+|-.
T Consensus 333 ~~p~~ 337 (412)
T 3otg_A 333 SFPWA 337 (412)
T ss_dssp ECCCS
T ss_pred ecCCc
Confidence 98764
No 66
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=33.75 E-value=59 Score=25.41 Aligned_cols=57 Identities=16% Similarity=0.135 Sum_probs=37.9
Q ss_pred cHHHHHHHHHHcCCcEEEEEcCCCC---e------EEEE------EecC------CCcCHHHHHHHhhcCCCEEEEcC
Q psy5985 12 KLPQIAAKLKELKIQALLIIGGFEV---S------FFAL------KTMG------GYCGYLATVAGLAGGADAAYIYE 68 (153)
Q Consensus 12 ~~~~~~~~L~~~~Id~LvvIGGdgs---~------v~iV------EvMG------R~aG~LA~~aglA~gad~iliPE 68 (153)
.+..+++.|++.+...+++.|++-. + +.++ ++|. -++|+.++.-+++.|.-.+++|-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~ll~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~ 325 (402)
T 3ia7_A 248 FFRACAQAFADTPWHVVMAIGGFLDPAVLGPLPPNVEAHQWIPFHSVLAHARACLTHGTTGAVLEAFAAGVPLVLVPH 325 (402)
T ss_dssp HHHHHHHHHTTSSCEEEEECCTTSCGGGGCSCCTTEEEESCCCHHHHHTTEEEEEECCCHHHHHHHHHTTCCEEECGG
T ss_pred HHHHHHHHHhcCCcEEEEEeCCcCChhhhCCCCCcEEEecCCCHHHHHhhCCEEEECCCHHHHHHHHHhCCCEEEeCC
Confidence 5778888888888666665664311 0 1111 1111 36899998999999999999886
No 67
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=32.69 E-value=34 Score=28.49 Aligned_cols=26 Identities=19% Similarity=0.295 Sum_probs=21.9
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS 37 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~ 37 (153)
..++.+++.|.+. .|.++||||-.|-
T Consensus 213 ~~RQ~av~~lA~~-vD~miVVGg~nSS 238 (328)
T 3szu_A 213 TNRQEAVRALAEQ-AEVVLVVGSKNSS 238 (328)
T ss_dssp HHHHHHHHHHHHH-CSEEEEECCTTCH
T ss_pred HHHHHHHHHHHHh-CCEEEEeCCCCCc
Confidence 3688888888875 9999999998874
No 68
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=32.42 E-value=1.8e+02 Score=22.84 Aligned_cols=100 Identities=18% Similarity=0.055 Sum_probs=57.8
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------E-EEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS----------------------F-FALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~----------------------v-~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.+-+.++|+|++.|-.|=+ + .|+=| |.++=.=|. ..+-+.|||.+
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv-g~~~t~~ai~la~~a~~~Gadav 100 (292)
T 2ojp_A 22 ASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGT-GANATAEAISLTQRFNDSGIVGC 100 (292)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC-CCSSHHHHHHHHHHTTTSSCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec-CCccHHHHHHHHHHHHhcCCCEE
Confidence 458888999999999999999988876 2 23333 332212121 11223599987
Q ss_pred EE-cCC--CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCC--CCCCcChHHHHHHH
Q psy5985 65 YI-YEE--KFSIKDLQQDLYHMASKMAEGVQRGLILRNEK--CNDNYNTDFIYRLY 115 (153)
Q Consensus 65 li-PE~--~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG--~~~~~~~~~l~~~~ 115 (153)
++ |-. +.+.+.+.+..+.+. +.-+--|++-.== .+...+.+.+.++.
T Consensus 101 lv~~P~y~~~s~~~l~~~f~~ia----~a~~lPiilYn~P~~tg~~l~~~~~~~La 152 (292)
T 2ojp_A 101 LTVTPYYNRPSQEGLYQHFKAIA----EHTDLPQILYNVPSRTGCDLLPETVGRLA 152 (292)
T ss_dssp EEECCCSSCCCHHHHHHHHHHHH----TTCSSCEEEECCHHHHSCCCCHHHHHHHH
T ss_pred EECCCCCCCCCHHHHHHHHHHHH----HhcCCCEEEEeCcchhccCCCHHHHHHHH
Confidence 65 332 457788877766543 2223345554420 11234556677764
No 69
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=32.39 E-value=1e+02 Score=23.91 Aligned_cols=79 Identities=14% Similarity=0.139 Sum_probs=42.5
Q ss_pred HHHHHHHHHHcCCc--EEEEEcCCCCeEEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCC--CCHHHHHHHHHHHHHHHH
Q psy5985 13 LPQIAAKLKELKIQ--ALLIIGGFEVSFFALKTMGGYCGYLATVAGLAGGADAAYIYEEK--FSIKDLQQDLYHMASKMA 88 (153)
Q Consensus 13 ~~~~~~~L~~~~Id--~LvvIGGdgs~v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~--~~~~~l~~~i~~i~~~~~ 88 (153)
.+++.+.|+..+++ .+. + .. +-+.-|...=-+|++.+++..|+++++=|.. .|...- +.+..+.+++.
T Consensus 114 ~~~~~~~l~~~gl~~~~~~----~-~~--~~~LSgGq~qRv~lAraL~~~p~lllLDEPts~LD~~~~-~~l~~~l~~l~ 185 (266)
T 2yz2_A 114 VPLVKKAMEFVGLDFDSFK----D-RV--PFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGK-TDLLRIVEKWK 185 (266)
T ss_dssp HHHHHHHHHHTTCCHHHHT----T-CC--GGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTTCCHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCcccc----c-CC--hhhCCHHHHHHHHHHHHHHcCCCEEEEcCccccCCHHHH-HHHHHHHHHHH
Confidence 45566677777765 320 0 00 0112222333568899999999999998764 443322 22233334444
Q ss_pred cCCCeEEEEEeC
Q psy5985 89 EGVQRGLILRNE 100 (153)
Q Consensus 89 ~~~~~~iIvvaE 100 (153)
+. +..+|+++=
T Consensus 186 ~~-g~tii~vtH 196 (266)
T 2yz2_A 186 TL-GKTVILISH 196 (266)
T ss_dssp HT-TCEEEEECS
T ss_pred Hc-CCEEEEEeC
Confidence 32 455666553
No 70
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=32.34 E-value=1.4e+02 Score=23.73 Aligned_cols=100 Identities=17% Similarity=0.089 Sum_probs=58.2
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------E-EEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS----------------------F-FALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~----------------------v-~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.+-+.++|+|++.|..|=+ + .|+=|-+ ++=.=|. ..+-..|||.+
T Consensus 21 ~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~la~~A~~~Gadav 99 (297)
T 2rfg_A 21 KALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGS-NNPVEAVRYAQHAQQAGADAV 99 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCC-CCHHHHHHHHHHHHhcCCCEE
Confidence 357888999999999999999987765 2 2333322 2211111 12233599988
Q ss_pred EEcCC---CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCC--CCCCcChHHHHHHH
Q psy5985 65 YIYEE---KFSIKDLQQDLYHMASKMAEGVQRGLILRNEK--CNDNYNTDFIYRLY 115 (153)
Q Consensus 65 liPE~---~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG--~~~~~~~~~l~~~~ 115 (153)
++.-. +.+.+.+.+..+.+.+. -+--|++-.== .....+.+.+.++.
T Consensus 100 lv~~P~y~~~s~~~l~~~f~~va~a----~~lPiilYn~P~~tg~~l~~~~~~~La 151 (297)
T 2rfg_A 100 LCVAGYYNRPSQEGLYQHFKMVHDA----IDIPIIVYNIPPRAVVDIKPETMARLA 151 (297)
T ss_dssp EECCCTTTCCCHHHHHHHHHHHHHH----CSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EEcCCCCCCCCHHHHHHHHHHHHHh----cCCCEEEEeCccccCCCCCHHHHHHHH
Confidence 76432 45778888777665432 12345554420 11234567777764
No 71
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=32.14 E-value=35 Score=28.06 Aligned_cols=26 Identities=23% Similarity=0.394 Sum_probs=21.9
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS 37 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~ 37 (153)
..++.+++.|.+ ..|.++||||-.|-
T Consensus 197 ~~RQ~av~~la~-~~D~miVVGg~nSS 222 (297)
T 3dnf_A 197 SLRQESVKKLAP-EVDVMIIIGGKNSG 222 (297)
T ss_dssp HHHHHHHHHHGG-GSSEEEEESCTTCH
T ss_pred HHHHHHHHHHHh-hCCEEEEECCCCCc
Confidence 358889999987 59999999998874
No 72
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=32.06 E-value=69 Score=27.00 Aligned_cols=67 Identities=21% Similarity=0.293 Sum_probs=49.2
Q ss_pred eecCCCCCCCcHHHHHHHHHHcCCcEEEEEcCCC------------------Ce---E--------EEEE----------
Q psy5985 2 LGTKRTLPEKKLPQIAAKLKELKIQALLIIGGFE------------------VS---F--------FALK---------- 42 (153)
Q Consensus 2 LgTsR~~~~e~~~~~~~~L~~~~Id~LvvIGGdg------------------s~---v--------~iVE---------- 42 (153)
+||.-....+.+..+++.|++.+...|.++|... .+ + ++|.
T Consensus 275 ~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~ 354 (480)
T 2vch_A 275 FGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLA 354 (480)
T ss_dssp CTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHH
T ss_pred cccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhC
Confidence 3443322345688899999999999999998642 11 1 4554
Q ss_pred -----ecCCCcCHHHHHHHhhcCCCEEEEcC
Q psy5985 43 -----TMGGYCGYLATVAGLAGGADAAYIYE 68 (153)
Q Consensus 43 -----vMGR~aG~LA~~aglA~gad~iliPE 68 (153)
.+=-||||-++.-+++.|.-++.+|=
T Consensus 355 h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~ 385 (480)
T 2vch_A 355 HPSTGGFLTHCGWNSTLESVVSGIPLIAWPL 385 (480)
T ss_dssp STTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred CCCcCeEEecccchhHHHHHHcCCCEEeccc
Confidence 22248999999999999999999995
No 73
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=31.56 E-value=1e+02 Score=23.41 Aligned_cols=49 Identities=12% Similarity=0.164 Sum_probs=30.4
Q ss_pred CHHHHHHHhhcCCCEEEEcCCC--CCHHHHHHHHHHHHHHHHcCCCeEEEEEe
Q psy5985 49 GYLATVAGLAGGADAAYIYEEK--FSIKDLQQDLYHMASKMAEGVQRGLILRN 99 (153)
Q Consensus 49 G~LA~~aglA~gad~iliPE~~--~~~~~l~~~i~~i~~~~~~~~~~~iIvva 99 (153)
=-++++.+++..|+++++=|.. .|.+.- +.+..+.+++.+ ++..+|+++
T Consensus 146 qrv~lAraL~~~p~lllLDEPts~LD~~~~-~~l~~~l~~~~~-~g~tvi~vt 196 (240)
T 1ji0_A 146 QMLAIGRALMSRPKLLMMDEPSLGLAPILV-SEVFEVIQKINQ-EGTTILLVE 196 (240)
T ss_dssp HHHHHHHHHTTCCSEEEEECTTTTCCHHHH-HHHHHHHHHHHH-TTCCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHH-HHHHHHHHHHHH-CCCEEEEEe
Confidence 3568889999999999998874 443322 222233344443 355677766
No 74
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=31.15 E-value=84 Score=24.89 Aligned_cols=53 Identities=11% Similarity=0.050 Sum_probs=38.1
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCC------e--------------------EEEEEecCCCcCHHHHHHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEV------S--------------------FFALKTMGGYCGYLATVAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs------~--------------------v~iVEvMGR~aG~LA~~aglA~gad~i 64 (153)
+.+..+++.|++.++..++..|.+-. . ++| -++|+.++.-+++.|.-.+
T Consensus 263 ~~~~~~~~al~~~~~~~v~~~g~~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~~v-----~~~G~~t~~Ea~~~G~P~v 337 (415)
T 3rsc_A 263 GFFRDCARAFDGQPWHVVMTLGGQVDPAALGDLPPNVEAHRWVPHVKVLEQATVCV-----THGGMGTLMEALYWGRPLV 337 (415)
T ss_dssp HHHHHHHHHHTTSSCEEEEECTTTSCGGGGCCCCTTEEEESCCCHHHHHHHEEEEE-----ESCCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCCCChHHhcCCCCcEEEEecCCHHHHHhhCCEEE-----ECCcHHHHHHHHHhCCCEE
Confidence 34777888888888666665664311 0 433 2689999899999999999
Q ss_pred EEcC
Q psy5985 65 YIYE 68 (153)
Q Consensus 65 liPE 68 (153)
++|-
T Consensus 338 ~~p~ 341 (415)
T 3rsc_A 338 VVPQ 341 (415)
T ss_dssp ECCC
T ss_pred EeCC
Confidence 9986
No 75
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=30.87 E-value=1.1e+02 Score=23.83 Aligned_cols=49 Identities=10% Similarity=0.106 Sum_probs=29.6
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCCHHHHH-HHHHHHHHHHHcCCCeEEEEEe
Q psy5985 50 YLATVAGLAGGADAAYIYEEKFSIKDLQ-QDLYHMASKMAEGVQRGLILRN 99 (153)
Q Consensus 50 ~LA~~aglA~gad~iliPE~~~~~~~l~-~~i~~i~~~~~~~~~~~iIvva 99 (153)
-++++.+++..|+++++=|..-.+|... +.+..+.+++.+. +..+|+++
T Consensus 167 Rv~lAraL~~~p~lllLDEPts~LD~~~~~~~~~~l~~l~~~-g~tvi~vt 216 (263)
T 2olj_A 167 RVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANE-GMTMVVVT 216 (263)
T ss_dssp HHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHT-TCEEEEEC
T ss_pred HHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhC-CCEEEEEc
Confidence 4688899999999999988743333222 2223334444432 45666665
No 76
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=30.67 E-value=1.1e+02 Score=20.03 Aligned_cols=32 Identities=9% Similarity=0.201 Sum_probs=26.4
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+++.+.+++++.+.|+-.+|.++-+|
T Consensus 84 ~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Gii 115 (127)
T 3nqr_A 84 SKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLV 115 (127)
T ss_dssp TCBHHHHHHHHHHTTCCEEEEECTTSCEEEEE
T ss_pred CCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEE
Confidence 45689999999999999999998887764443
No 77
>1f2t_B RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_B* 1us8_B*
Probab=30.55 E-value=1.2e+02 Score=21.51 Aligned_cols=44 Identities=16% Similarity=0.142 Sum_probs=24.3
Q ss_pred HHhhcCCCEEEEcCCCCCHHHH-HHHHHHHHHHHHcCCCeEEEEEe
Q psy5985 55 AGLAGGADAAYIYEEKFSIKDL-QQDLYHMASKMAEGVQRGLILRN 99 (153)
Q Consensus 55 aglA~gad~iliPE~~~~~~~l-~~~i~~i~~~~~~~~~~~iIvva 99 (153)
.+++..++++++=|..-.+|.- .+.+..+.+++.+ .+..+|+++
T Consensus 76 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiiivs 120 (148)
T 1f2t_B 76 LYLAGEISLLILDEPTPYLDEERRRKLITIMERYLK-KIPQVILVS 120 (148)
T ss_dssp HHHHSSCSEEEEESCSCTTCHHHHHHHHHHHHHTGG-GSSEEEEEE
T ss_pred HHHcCCCCEEEEECCCccCCHHHHHHHHHHHHHHHc-cCCEEEEEE
Confidence 5666789999998875444322 2223333333332 245676666
No 78
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=30.42 E-value=1e+02 Score=19.65 Aligned_cols=32 Identities=9% Similarity=0.287 Sum_probs=26.8
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
.+....+++.+.+++++.+.|+-.+|.++-+|
T Consensus 78 ~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giv 109 (122)
T 3kpb_A 78 DEPVDHVAIKMSKYNISGVPVVDDYRRVVGIV 109 (122)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTCBEEEEE
T ss_pred CCCHHHHHHHHHHhCCCeEEEECCCCCEEEEE
Confidence 45689999999999999999998888765444
No 79
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=30.30 E-value=75 Score=24.14 Aligned_cols=50 Identities=10% Similarity=0.197 Sum_probs=30.1
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCCHHHH-HHHHHHHHHHHHcCCCeEEEEEe
Q psy5985 50 YLATVAGLAGGADAAYIYEEKFSIKDL-QQDLYHMASKMAEGVQRGLILRN 99 (153)
Q Consensus 50 ~LA~~aglA~gad~iliPE~~~~~~~l-~~~i~~i~~~~~~~~~~~iIvva 99 (153)
-+|++.|++..|+++++=|..-.+|.. .+.+..+.+++.+.++..+|+++
T Consensus 153 Rv~iAral~~~p~llllDEPts~LD~~~~~~i~~~l~~l~~~~g~tvi~vt 203 (235)
T 3tif_A 153 RVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVT 203 (235)
T ss_dssp HHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 588999999999999998864333321 12223334444432345666665
No 80
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=30.10 E-value=1.2e+02 Score=23.31 Aligned_cols=78 Identities=13% Similarity=0.097 Sum_probs=42.2
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCCeEEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCC--CCHHHHHHHHHHHHHHHHcC
Q psy5985 13 LPQIAAKLKELKIQALLIIGGFEVSFFALKTMGGYCGYLATVAGLAGGADAAYIYEEK--FSIKDLQQDLYHMASKMAEG 90 (153)
Q Consensus 13 ~~~~~~~L~~~~Id~LvvIGGdgs~v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~--~~~~~l~~~i~~i~~~~~~~ 90 (153)
.+++.+.|+..+++.+. +. .+-+.-|...=-++++.+++..|+++++=|.. .|...- +.+..+.+++.+
T Consensus 131 ~~~~~~~l~~~~l~~~~-----~~--~~~~LSgGqkQrv~iAraL~~~p~lllLDEPts~LD~~~~-~~l~~~l~~l~~- 201 (257)
T 1g6h_A 131 VEKAFKILEFLKLSHLY-----DR--KAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLA-HDIFNHVLELKA- 201 (257)
T ss_dssp HHHHHHHHHHTTCGGGT-----TS--BGGGSCHHHHHHHHHHHHHHTCCSEEEEESTTTTCCHHHH-HHHHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCchhh-----CC--CchhCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHH-HHHHHHHHHHHH-
Confidence 44566777777765320 00 01112222223568889999999999998864 443322 223333444543
Q ss_pred CCeEEEEEe
Q psy5985 91 VQRGLILRN 99 (153)
Q Consensus 91 ~~~~iIvva 99 (153)
++..+|+++
T Consensus 202 ~g~tvi~vt 210 (257)
T 1g6h_A 202 KGITFLIIE 210 (257)
T ss_dssp TTCEEEEEC
T ss_pred CCCEEEEEe
Confidence 245666665
No 81
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=29.52 E-value=86 Score=18.13 Aligned_cols=31 Identities=13% Similarity=0.229 Sum_probs=24.4
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+++.+.+++++.+.|+-+ |.++-+|
T Consensus 8 ~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Giv 38 (70)
T 3fio_A 8 KDTVDRVAKILSRNKAGSAVVMEG-DEILGVV 38 (70)
T ss_dssp TCBHHHHHHHHHHTTCSEEEEEET-TEEEEEE
T ss_pred CCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEE
Confidence 456889999999999999999876 6554444
No 82
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=29.08 E-value=44 Score=22.94 Aligned_cols=20 Identities=15% Similarity=0.066 Sum_probs=17.3
Q ss_pred HHHHHHHHHHcCCcEEEEEc
Q psy5985 13 LPQIAAKLKELKIQALLIIG 32 (153)
Q Consensus 13 ~~~~~~~L~~~~Id~LvvIG 32 (153)
++++.+.|+++++|++++-.
T Consensus 6 l~~l~~~m~~~glDa~li~~ 25 (140)
T 3i7m_A 6 LEQIQQWTAQHHASMTYLSN 25 (140)
T ss_dssp HHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECC
Confidence 67788999999999999864
No 83
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=29.06 E-value=1.9e+02 Score=22.98 Aligned_cols=100 Identities=16% Similarity=0.137 Sum_probs=57.5
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------E-EEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS----------------------F-FALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~----------------------v-~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.+-+.++|+|++.|-.|=+ + .|+=| |.++=.=|. ..+-+.|||.+
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv-g~~st~~ai~la~~A~~~Gadav 111 (306)
T 1o5k_A 33 ESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA-GTNSTEKTLKLVKQAEKLGANGV 111 (306)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC-CCSCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC-CCccHHHHHHHHHHHHhcCCCEE
Confidence 457888999999999999999987765 2 33333 322211111 11233599987
Q ss_pred EEc-CC--CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCC--CCCCcChHHHHHHH
Q psy5985 65 YIY-EE--KFSIKDLQQDLYHMASKMAEGVQRGLILRNEK--CNDNYNTDFIYRLY 115 (153)
Q Consensus 65 liP-E~--~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG--~~~~~~~~~l~~~~ 115 (153)
++. -. +.+.+.+.+..+.+. +.-+--|++-.== .....+.+.+.++.
T Consensus 112 lv~~P~y~~~s~~~l~~~f~~va----~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 112 LVVTPYYNKPTQEGLYQHYKYIS----ERTDLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp EEECCCSSCCCHHHHHHHHHHHH----TTCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EECCCCCCCCCHHHHHHHHHHHH----HhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 663 32 457778777665543 3223345555421 11234566777765
No 84
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=28.75 E-value=1.3e+02 Score=23.20 Aligned_cols=49 Identities=10% Similarity=0.129 Sum_probs=29.7
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCCHHHHH-HHHHHHHHHHHcCCCeEEEEEe
Q psy5985 50 YLATVAGLAGGADAAYIYEEKFSIKDLQ-QDLYHMASKMAEGVQRGLILRN 99 (153)
Q Consensus 50 ~LA~~aglA~gad~iliPE~~~~~~~l~-~~i~~i~~~~~~~~~~~iIvva 99 (153)
-++++.+++..|+++++=|..-.+|... +.+..+.+++.+ ++..+|+++
T Consensus 154 Rv~lAraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~-~g~tiiivt 203 (256)
T 1vpl_A 154 KLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQ-EGLTILVSS 203 (256)
T ss_dssp HHHHHHHHTTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHH-TTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCccccCHHHHHHHHHHHHHHHh-CCCEEEEEc
Confidence 5688899999999999988643333221 222233334443 355666665
No 85
>2h4a_A YRAM (HI1655); perplasmic binding protein, lipoprotein; 1.35A {Haemophilus influenzae} PDB: 3ckm_A
Probab=28.62 E-value=39 Score=27.08 Aligned_cols=59 Identities=10% Similarity=-0.076 Sum_probs=44.6
Q ss_pred cHHHHHHHHHHcCCcEEEEEcCCCCe------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCC
Q psy5985 12 KLPQIAAKLKELKIQALLIIGGFEVS------------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEEK 70 (153)
Q Consensus 12 ~~~~~~~~L~~~~Id~LvvIGGdgs~------------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~ 70 (153)
.-+.+++.+.+.++.-..+|.-|+.+ +.-.|...+..-|-+...-++.++|.|++|-..
T Consensus 109 ~~~~~a~~a~~~g~k~vail~~~~~yG~~~~~~F~~~~~~~Gg~vv~~~~y~~~~d~~~~l~~i~~~pDaV~~~~~~ 185 (325)
T 2h4a_A 109 EAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNVRWQQLAGTDANIRYYNLPADVTYFVQENNSNTTALYAVASP 185 (325)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEESSHHHHHHHHHHHHHHHHHHSSCCEEEEESSTTHHHHHHHHSTTCCCEEEECCCH
T ss_pred HHHHHHHHHHHcCCCeEEEEEcCCcHHHHHHHHHHHHHHHcCCCcceeEecCCHHHHHHHHHhcCCCCCEEEEeCCH
Confidence 46677788888999999999888877 555677777665555555556799999999643
No 86
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=28.48 E-value=2.8e+02 Score=23.78 Aligned_cols=76 Identities=13% Similarity=0.100 Sum_probs=50.3
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE----------------EecCC---------CcCHHH-HHHHhhcCCCE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL----------------KTMGG---------YCGYLA-TVAGLAGGADA 63 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV----------------EvMGR---------~aG~LA-~~aglA~gad~ 63 (153)
......+.+.|++++++.|.|+-.+|.++-+| +.||| ....+. +.+.+..|+|.
T Consensus 192 ~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~ 271 (511)
T 3usb_A 192 GTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDA 271 (511)
T ss_dssp TCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSE
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHHHHHHHhhccce
Confidence 34689999999999999999998888873333 22333 222333 34455679999
Q ss_pred EEEcCCCCCHHHHHHHHHHHHH
Q psy5985 64 AYIYEEKFSIKDLQQDLYHMAS 85 (153)
Q Consensus 64 iliPE~~~~~~~l~~~i~~i~~ 85 (153)
+.+--.......+.+.++.+.+
T Consensus 272 I~Id~a~g~~~~v~~~i~~i~~ 293 (511)
T 3usb_A 272 IVLDTAHGHSQGVIDKVKEVRA 293 (511)
T ss_dssp EEEECSCTTSHHHHHHHHHHHH
T ss_pred EEecccccchhhhhhHHHHHHH
Confidence 9885443344566666665543
No 87
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=28.07 E-value=88 Score=24.60 Aligned_cols=22 Identities=14% Similarity=-0.016 Sum_probs=18.8
Q ss_pred HHHHHHHhhcCCCEEEEcCCCC
Q psy5985 50 YLATVAGLAGGADAAYIYEEKF 71 (153)
Q Consensus 50 ~LA~~aglA~gad~iliPE~~~ 71 (153)
-+|++.+++..|+++++=|..-
T Consensus 151 Rv~iAraL~~~P~lLlLDEPts 172 (275)
T 3gfo_A 151 RVAIAGVLVMEPKVLILDEPTA 172 (275)
T ss_dssp HHHHHHHHTTCCSEEEEECTTT
T ss_pred HHHHHHHHHcCCCEEEEECccc
Confidence 5889999999999999977643
No 88
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=28.05 E-value=36 Score=27.97 Aligned_cols=25 Identities=12% Similarity=0.246 Sum_probs=21.7
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCC
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGF 34 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGd 34 (153)
.+...++++.++++++|.+|-|||=
T Consensus 78 ~~~v~~~~~~~~~~~~d~IIavGGG 102 (387)
T 3bfj_A 78 DTNVRDGLAVFRREQCDIIVTVGGG 102 (387)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEESH
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 3568899999999999999999983
No 89
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=28.03 E-value=1.5e+02 Score=23.45 Aligned_cols=101 Identities=14% Similarity=0.064 Sum_probs=58.0
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------EEEEEecCCCcC---HHHHHHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS-----------------------FFALKTMGGYCG---YLATVAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~-----------------------v~iVEvMGR~aG---~LA~~aglA~gad~i 64 (153)
+.+++.++.+-+.++|+|++.|-.|=+ -.++=|.+-+.- .+|- .+-+.|||.+
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~-~A~~~Gadav 99 (292)
T 2vc6_A 21 VALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVR-HAQNAGADGV 99 (292)
T ss_dssp HHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHH-HHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHH-HHHHcCCCEE
Confidence 357888999999999999999987765 223333331211 1221 1233599987
Q ss_pred EE-cCC--CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCC--CCCCcChHHHHHHHH
Q psy5985 65 YI-YEE--KFSIKDLQQDLYHMASKMAEGVQRGLILRNEK--CNDNYNTDFIYRLYS 116 (153)
Q Consensus 65 li-PE~--~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG--~~~~~~~~~l~~~~~ 116 (153)
++ |-. +.+.+.+.+..+.+.+. -+--|++-.== .....+.+.+.++.+
T Consensus 100 lv~~P~y~~~s~~~l~~~f~~ia~a----~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 100 LIVSPYYNKPTQEGIYQHFKAIDAA----STIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp EEECCCSSCCCHHHHHHHHHHHHHH----CSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred EEcCCCCCCCCHHHHHHHHHHHHHh----CCCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 65 332 45778888777665432 23345554410 112345567777654
No 90
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=27.88 E-value=1.9e+02 Score=21.56 Aligned_cols=60 Identities=15% Similarity=0.182 Sum_probs=42.0
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe----------------E-EEEEecCCCcCHHHHHHHhhcCCCEEEEcCCC
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS----------------F-FALKTMGGYCGYLATVAGLAGGADAAYIYEEK 70 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~----------------v-~iVEvMGR~aG~LA~~aglA~gad~iliPE~~ 70 (153)
.+...+++.+.+.++|+|.+..-++++ + .-+-++|.-.-.=-+...++.|||.+.++-..
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~ 106 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAA 106 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 456778899999999999999887664 1 12344555443334566667899999998653
No 91
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=27.59 E-value=1.2e+02 Score=23.40 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=29.2
Q ss_pred HHHHHHHhhcCCCEEEEcCCC--CCHHHHHHHHHHHHHHHHcCCCeEEEEEe
Q psy5985 50 YLATVAGLAGGADAAYIYEEK--FSIKDLQQDLYHMASKMAEGVQRGLILRN 99 (153)
Q Consensus 50 ~LA~~aglA~gad~iliPE~~--~~~~~l~~~i~~i~~~~~~~~~~~iIvva 99 (153)
-+|++.|++..|+++++=|.. .|...- +.+..+.+++.+. +..+|+++
T Consensus 161 Rv~lAraL~~~p~lllLDEPts~LD~~~~-~~~~~~l~~l~~~-g~tvi~vt 210 (262)
T 1b0u_A 161 RVSIARALAMEPDVLLFDEPTSALDPELV-GEVLRIMQQLAEE-GKTMVVVT 210 (262)
T ss_dssp HHHHHHHHHTCCSEEEEESTTTTSCHHHH-HHHHHHHHHHHHT-TCCEEEEC
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHH-HHHHHHHHHHHhC-CCEEEEEe
Confidence 578899999999999998864 443322 2222233444432 45566654
No 92
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=27.57 E-value=1.1e+02 Score=19.96 Aligned_cols=32 Identities=13% Similarity=0.325 Sum_probs=26.3
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+++.+.+++++.+.|+-.+|.++-+|
T Consensus 87 ~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGiv 118 (130)
T 3i8n_A 87 NTALPKVFDQMMTHRLQLALVVDEYGTVLGLV 118 (130)
T ss_dssp TSCHHHHHHHHHHHTCCEEEEECTTSCEEEEE
T ss_pred CCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEE
Confidence 45688999999999999999998877764443
No 93
>3ooo_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; HET: MSE; 1.57A {Streptococcus agalactiae} PDB: 3peb_A*
Probab=27.54 E-value=49 Score=22.43 Aligned_cols=20 Identities=15% Similarity=0.260 Sum_probs=16.9
Q ss_pred HHHHHHHHHHcCCcEEEEEc
Q psy5985 13 LPQIAAKLKELKIQALLIIG 32 (153)
Q Consensus 13 ~~~~~~~L~~~~Id~LvvIG 32 (153)
++++.+.|++.++|++++-.
T Consensus 5 l~~l~~~m~~~glDa~li~~ 24 (132)
T 3ooo_A 5 LNRIRHHLHSVQAELAVFSD 24 (132)
T ss_dssp HHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHCCCCEEEEcC
Confidence 56788899999999998853
No 94
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=27.34 E-value=99 Score=24.08 Aligned_cols=50 Identities=10% Similarity=0.043 Sum_probs=29.1
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCCHHHHH-HHHHHHHHHHHcCCCeEEEEEe
Q psy5985 50 YLATVAGLAGGADAAYIYEEKFSIKDLQ-QDLYHMASKMAEGVQRGLILRN 99 (153)
Q Consensus 50 ~LA~~aglA~gad~iliPE~~~~~~~l~-~~i~~i~~~~~~~~~~~iIvva 99 (153)
-+|++.+|+..|+++++=|..-.+|... +.+..+.+++.+..+..+|+++
T Consensus 164 Rv~lAraL~~~p~lllLDEPts~LD~~~~~~i~~~l~~~~~~~g~tviivt 214 (271)
T 2ixe_A 164 AVALARALIRKPRLLILDNATSALDAGNQLRVQRLLYESPEWASRTVLLIT 214 (271)
T ss_dssp HHHHHHHHTTCCSEEEEESTTTTCCHHHHHHHHHHHHHCTTTTTSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEe
Confidence 5788899999999999977643333222 2223333333322245566665
No 95
>3pn9_A Proline dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, hydrolase; 2.00A {Streptococcus pneumoniae}
Probab=27.34 E-value=45 Score=22.60 Aligned_cols=22 Identities=27% Similarity=0.345 Sum_probs=18.7
Q ss_pred CcHHHHHHHHHHcCCcEEEEEc
Q psy5985 11 KKLPQIAAKLKELKIQALLIIG 32 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIG 32 (153)
+.++++.+.|+++++|++++-.
T Consensus 5 ~Rl~~lr~~m~~~~~da~li~~ 26 (138)
T 3pn9_A 5 SKLQQILTYLESEKLDVAVVSD 26 (138)
T ss_dssp CHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHHHHCCCCEEEEcC
Confidence 3578888999999999999864
No 96
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=27.22 E-value=49 Score=22.45 Aligned_cols=19 Identities=21% Similarity=0.170 Sum_probs=16.6
Q ss_pred HHHHHHHHHHcCCcEEEEE
Q psy5985 13 LPQIAAKLKELKIQALLII 31 (153)
Q Consensus 13 ~~~~~~~L~~~~Id~LvvI 31 (153)
++++.+.|++.++|++++-
T Consensus 5 l~~l~~~m~~~glDa~li~ 23 (132)
T 3o5v_A 5 LDQIRLYLDQKGAELAIFS 23 (132)
T ss_dssp HHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEc
Confidence 6778889999999999884
No 97
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=27.17 E-value=57 Score=25.65 Aligned_cols=53 Identities=17% Similarity=0.210 Sum_probs=40.5
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCC---------C----e-----------EEEEEecCCCcCHHHHHHHhhcCCCEEEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFE---------V----S-----------FFALKTMGGYCGYLATVAGLAGGADAAYI 66 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdg---------s----~-----------v~iVEvMGR~aG~LA~~aglA~gad~ili 66 (153)
+....+++.|.+.+++.+++.|++. . + +||- ++|+.++.-+++.|.-.+.+
T Consensus 231 ~~~~~~~~al~~~~~~~~~~~g~~~~~~l~~~~~~v~~~~~~~~~~l~~~d~~v~-----~~G~~t~~Ea~~~G~P~v~~ 305 (384)
T 2p6p_A 231 DFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQARVGWTPLDVVAPTCDLLVH-----HAGGVSTLTGLSAGVPQLLI 305 (384)
T ss_dssp TTHHHHHHHHHTTTCEEEEECCHHHHHHHHHHCTTSEEECCCHHHHGGGCSEEEE-----CSCTTHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCCCHHhhCCCCCceEEcCCCHHHHHhhCCEEEe-----CCcHHHHHHHHHhCCCEEEc
Confidence 5688889999988887777666521 0 0 4553 68999999999999999999
Q ss_pred cC
Q psy5985 67 YE 68 (153)
Q Consensus 67 PE 68 (153)
|-
T Consensus 306 p~ 307 (384)
T 2p6p_A 306 PK 307 (384)
T ss_dssp CC
T ss_pred cC
Confidence 86
No 98
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans}
Probab=27.15 E-value=2.6e+02 Score=22.86 Aligned_cols=74 Identities=14% Similarity=0.221 Sum_probs=52.3
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCCeEEEEEecCCCcCHHHHHHHhhcC---CCEEEE--cCCCCCHHHHHHHHHHHHHHH
Q psy5985 13 LPQIAAKLKELKIQALLIIGGFEVSFFALKTMGGYCGYLATVAGLAGG---ADAAYI--YEEKFSIKDLQQDLYHMASKM 87 (153)
Q Consensus 13 ~~~~~~~L~~~~Id~LvvIGGdgs~v~iVEvMGR~aG~LA~~aglA~g---ad~ili--PE~~~~~~~l~~~i~~i~~~~ 87 (153)
++.+.+.|++++|-++ +-+|.+=.=..|-.++.-++..| |+.|++ |+.+-..+++++.++...
T Consensus 68 l~~l~~~l~~r~v~a~---------~~vi~a~d~~~G~~~lvq~yglg~l~PNTilLg~~~~~e~~~~y~~~i~~~~--- 135 (294)
T 3g40_A 68 LPSISEGFQEEGVFSS---------WTIIDTAEFEENLVVGMEALTGSFFRPSILFLRLPENRDRDEEIREIIRKAS--- 135 (294)
T ss_dssp HHHHHHHHHHTTCEEE---------EEEC-----CHHHHHHHHHHTTCSSCSCEEEEECCSSGGGHHHHHHHHHHHH---
T ss_pred HHHHHHHHHhCCceeE---------EEEEecCChhHHHHHHHHHcCCCCCCCCEEEeCCCCChhhhHHHHHHHHHHH---
Confidence 4777889999999866 56677767778888887777765 899999 999988899998776432
Q ss_pred HcCCCeEEEEEeC
Q psy5985 88 AEGVQRGLILRNE 100 (153)
Q Consensus 88 ~~~~~~~iIvvaE 100 (153)
+ .+..+|+.++
T Consensus 136 -~-~~~nVlil~~ 146 (294)
T 3g40_A 136 -M-YRMGVLLFSK 146 (294)
T ss_dssp -H-TTCEEEEEEC
T ss_pred -H-hCceEEEEec
Confidence 2 3556666676
No 99
>3ky8_A Putative riboflavin biosynthesis protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE UNL; 2.12A {Shewanella loihica}
Probab=27.03 E-value=43 Score=25.16 Aligned_cols=24 Identities=38% Similarity=0.447 Sum_probs=20.9
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCC
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGF 34 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGd 34 (153)
.+...+++.|++.+++-++|+||-
T Consensus 113 ~~l~~~l~~L~~~~~~~i~v~GG~ 136 (197)
T 3ky8_A 113 GKLVDIIADLNAKGFNELYIDGGV 136 (197)
T ss_dssp SCHHHHHHHHHHTTCCEEEEESHH
T ss_pred CCHHHHHHHHHhCCCCeEEEEehH
Confidence 467889999999999999999984
No 100
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=27.02 E-value=2.3e+02 Score=22.25 Aligned_cols=73 Identities=15% Similarity=0.005 Sum_probs=46.7
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe------------------E--EEEEecCCCcCHHHH---HHHhhcCCCEEEEc
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS------------------F--FALKTMGGYCGYLAT---VAGLAGGADAAYIY 67 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~------------------v--~iVEvMGR~aG~LA~---~aglA~gad~iliP 67 (153)
+.+++.++.+-+.++|+|++.|..|=+ + .|+=| |.++=.=|. ..+-..|||.+++.
T Consensus 20 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~gViaGv-g~~~t~~ai~la~~A~~~Gadavlv~ 98 (288)
T 2nuw_A 20 DALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHKLIFQV-GSLNLNDVMELVKFSNEMDILGVSSH 98 (288)
T ss_dssp HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSCEEEEC-CCSCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCeEEee-CCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 458889999999999999999988876 2 23333 222212121 11233599988763
Q ss_pred -CC--C-CCHHHHHHHHHHHH
Q psy5985 68 -EE--K-FSIKDLQQDLYHMA 84 (153)
Q Consensus 68 -E~--~-~~~~~l~~~i~~i~ 84 (153)
-. + .+.+.+.+..+.+.
T Consensus 99 ~P~y~~~~s~~~l~~~f~~va 119 (288)
T 2nuw_A 99 SPYYFPRLPEKFLAKYYEEIA 119 (288)
T ss_dssp CCCSSCSCCHHHHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHHHHHH
Confidence 32 4 57788887776654
No 101
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=27.02 E-value=36 Score=27.94 Aligned_cols=24 Identities=17% Similarity=0.196 Sum_probs=21.3
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcC
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGG 33 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGG 33 (153)
.+...++++.++++++|.+|-|||
T Consensus 74 ~~~v~~~~~~~~~~~~d~IIavGG 97 (386)
T 1rrm_A 74 ITVVKEGLGVFQNSGADYLIAIGG 97 (386)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEES
T ss_pred HHHHHHHHHHHHhcCcCEEEEeCC
Confidence 356889999999999999999998
No 102
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=26.91 E-value=1e+02 Score=23.87 Aligned_cols=54 Identities=9% Similarity=0.043 Sum_probs=37.0
Q ss_pred cCCCcCHHHHHHHhhcCCCEEEEc--CCCCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCC
Q psy5985 44 MGGYCGYLATVAGLAGGADAAYIY--EEKFSIKDLQQDLYHMASKMAEGVQRGLILRNEK 101 (153)
Q Consensus 44 MGR~aG~LA~~aglA~gad~iliP--E~~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG 101 (153)
-|.+.|.+.....-+.|||++++- |...+..++.+.++. ..+..=..|+.|.|-
T Consensus 69 ~Ga~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~----A~~~GL~~ivcVge~ 124 (226)
T 1w0m_A 69 GGAHTAHVSLENIKEAGGSGVILNHSEAPLKLNDLARLVAK----AKSLGLDVVVCAPDP 124 (226)
T ss_dssp CSSCTTCCBHHHHHHHTCCEEEECCTTSCCBHHHHHHHHHH----HHHTTCEEEEEESSH
T ss_pred CCCccCCCCHHHHHHcCCCEEEEeeeeccCCHHHHHHHHHH----HHHCCCEEEEEeCCH
Confidence 589999999988888999999986 555777776555432 122223456666663
No 103
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=26.79 E-value=1.3e+02 Score=19.77 Aligned_cols=31 Identities=19% Similarity=0.073 Sum_probs=25.6
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFA 40 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~i 40 (153)
......+++.+.+++++.+.|+-.+|.++-+
T Consensus 101 ~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Gi 131 (152)
T 4gqw_A 101 KTNLEDAAKILLETKYRRLPVVDSDGKLVGI 131 (152)
T ss_dssp SSBHHHHHHHHHHSSCCEEEEECTTSBEEEE
T ss_pred CCcHHHHHHHHHHCCCCEEEEECCCCcEEEE
Confidence 4568999999999999999999877766443
No 104
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=26.71 E-value=39 Score=28.08 Aligned_cols=25 Identities=28% Similarity=0.318 Sum_probs=21.7
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCC
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGF 34 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGd 34 (153)
.+..+++++.+++.++|.+|-|||=
T Consensus 87 ~~~v~~~~~~~~~~~~D~IIavGGG 111 (407)
T 1vlj_A 87 LSKVHEAVEVAKKEKVEAVLGVGGG 111 (407)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEESH
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCh
Confidence 3568899999999999999999983
No 105
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=26.34 E-value=41 Score=27.84 Aligned_cols=26 Identities=19% Similarity=0.199 Sum_probs=22.3
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCC
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFE 35 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdg 35 (153)
.+..+++++.+++++.|.+|-|||--
T Consensus 74 ~~~v~~~~~~~~~~~~D~IIavGGGs 99 (364)
T 3iv7_A 74 IEVAERARAVATDNEIDLLVCVGGGS 99 (364)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEESHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcH
Confidence 35688999999999999999999843
No 106
>3il0_A Aminopeptidase P; XAA-Pro aminopeptidase; structural genomics MCSG, protein structure initiative, midwest center for STRU genomics; HET: GOL; 2.20A {Streptococcus thermophilus}
Probab=26.23 E-value=49 Score=22.24 Aligned_cols=23 Identities=35% Similarity=0.576 Sum_probs=19.1
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcC
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGG 33 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGG 33 (153)
+.++++.+.|+++++|++++-..
T Consensus 6 ~Rl~~lr~~m~~~~~da~li~~~ 28 (131)
T 3il0_A 6 RRLERFDAKLVQSGLDALLVTGQ 28 (131)
T ss_dssp GHHHHHHHHHHHHTCSEEEECSH
T ss_pred HHHHHHHHHHHHcCCCEEEEecc
Confidence 45778889999999999998654
No 107
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=25.77 E-value=39 Score=27.96 Aligned_cols=25 Identities=16% Similarity=0.121 Sum_probs=21.8
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCC
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGF 34 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGd 34 (153)
.+..+++++.+++.+.|.+|-|||-
T Consensus 74 ~~~v~~~~~~~~~~~~D~IIavGGG 98 (383)
T 3ox4_A 74 VTAVLEGLKILKDNNSDFVISLGGG 98 (383)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESH
T ss_pred HHHHHHHHHHHHhcCcCEEEEeCCc
Confidence 4568899999999999999999983
No 108
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=25.58 E-value=39 Score=28.07 Aligned_cols=24 Identities=29% Similarity=0.441 Sum_probs=21.3
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcC
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGG 33 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGG 33 (153)
.+...++++.+++.+.|.+|-|||
T Consensus 92 ~~~v~~~~~~~~~~~~D~IIavGG 115 (408)
T 1oj7_A 92 YETLMNAVKLVREQKVTFLLAVGG 115 (408)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEES
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCC
Confidence 356888999999999999999998
No 109
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=25.54 E-value=2.2e+02 Score=24.35 Aligned_cols=63 Identities=14% Similarity=0.073 Sum_probs=42.7
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe--------EEEEEecCCCcC-HHHHHHHhhcCCCEEEEcCCCCCHHH
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS--------FFALKTMGGYCG-YLATVAGLAGGADAAYIYEEKFSIKD 75 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~--------v~iVEvMGR~aG-~LA~~aglA~gad~iliPE~~~~~~~ 75 (153)
.+...+.+-|++.+|+...++.|+.|+ .-+.=++++.+| ++|-+--=..|..++.. .|+-++.
T Consensus 183 gD~~eik~lL~~~Gi~v~~~~~gg~~~~ei~~~~~A~~niv~~~~~~~~~A~~Le~~~GiP~i~~--~PiG~~~ 254 (511)
T 2xdq_B 183 HDCRELKQLMADLGIQVNLVIPAAATVHDLQRLPQAWFNLVPYREIGGLTAQYLEREFGQPSVRI--TPMGVVE 254 (511)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEETTCCTTTGGGGGGSSEEECCCTTSSHHHHHHHHHHHCCCEECC--CCCSHHH
T ss_pred cHHHHHHHHHHHCCCeEEEEECCcCcHHHHHhhccCCEEEEEchhhhHHHHHHHHHHhCCCeEee--cccCHHH
Confidence 457889999999999999999999997 222234577776 44433333357777753 4665443
No 110
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=25.53 E-value=43 Score=27.26 Aligned_cols=24 Identities=17% Similarity=0.292 Sum_probs=21.0
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCC
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGF 34 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGd 34 (153)
+..+++++.+++++.|.+|-|||=
T Consensus 73 ~~v~~~~~~~~~~~~d~IIavGGG 96 (370)
T 1jq5_A 73 NEVERIANIARKAEAAIVIGVGGG 96 (370)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESH
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCh
Confidence 457889999999999999999983
No 111
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=25.24 E-value=1.4e+02 Score=19.36 Aligned_cols=32 Identities=9% Similarity=0.109 Sum_probs=25.8
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
.+....+++.+.+++++.+.|+-.+|.++-+|
T Consensus 83 ~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Gii 114 (133)
T 2ef7_A 83 DSPITGALALMRQFNIRHLPVVDDKGNLKGII 114 (133)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEECCCCeEEEEE
Confidence 45689999999999999999998777664433
No 112
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=25.23 E-value=44 Score=27.41 Aligned_cols=25 Identities=8% Similarity=0.112 Sum_probs=21.7
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCC
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGF 34 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGd 34 (153)
.+..+++++.+++.+.|.+|-+||=
T Consensus 73 ~~~v~~~~~~~~~~~~D~IIavGGG 97 (353)
T 3hl0_A 73 VEVTKTAVEAYRAAGADCVVSLGGG 97 (353)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEESH
T ss_pred HHHHHHHHHHHhccCCCEEEEeCCc
Confidence 3468889999999999999999984
No 113
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=24.91 E-value=41 Score=27.68 Aligned_cols=26 Identities=15% Similarity=0.217 Sum_probs=22.1
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCC
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFE 35 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdg 35 (153)
.+..+++++.+++.+.|.+|-|||=-
T Consensus 75 ~~~v~~~~~~~~~~~~D~IIavGGGs 100 (358)
T 3jzd_A 75 IESARDATARAREAGADCAVAVGGGS 100 (358)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESHH
T ss_pred HHHHHHHHHHhhccCCCEEEEeCCcH
Confidence 34678899999999999999999843
No 114
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=24.83 E-value=1.6e+02 Score=21.96 Aligned_cols=61 Identities=16% Similarity=0.117 Sum_probs=43.5
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe----------------E-EEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCC
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS----------------F-FALKTMGGYCGYLATVAGLAGGADAAYIYEEKF 71 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~----------------v-~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~ 71 (153)
++..++++.+.+.++|++.+...+... + .=|-++|+-.-.--+..+++.|||.++++-..+
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l 108 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAV 108 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHH
Confidence 457788899999999999998655331 1 123346766655556777788999999987544
No 115
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=24.64 E-value=1.5e+02 Score=22.90 Aligned_cols=13 Identities=23% Similarity=0.041 Sum_probs=11.0
Q ss_pred hhcCCCEEEEcCC
Q psy5985 57 LAGGADAAYIYEE 69 (153)
Q Consensus 57 lA~gad~iliPE~ 69 (153)
.+.|||+|+.||.
T Consensus 50 ~~~gadlvvfPE~ 62 (283)
T 3hkx_A 50 SEQGAQLLLTPEL 62 (283)
T ss_dssp HHTTCSEEECCTT
T ss_pred HHCCCCEEEcCCC
Confidence 3469999999997
No 116
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=24.63 E-value=2.6e+02 Score=22.11 Aligned_cols=102 Identities=14% Similarity=0.066 Sum_probs=59.5
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------EEEEEecCCCcCHHHH---HHHhhcCCCEEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS----------------------FFALKTMGGYCGYLAT---VAGLAGGADAAY 65 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~----------------------v~iVEvMGR~aG~LA~---~aglA~gad~il 65 (153)
+.+++.++.|-+.++|+|++.|..|=+ +-|+==-|.++=.=|. ..+-..|||.++
T Consensus 32 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavl 111 (303)
T 2wkj_A 32 ASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVS 111 (303)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEE
Confidence 357888999999999999999988876 2222223333222221 122335999876
Q ss_pred E-cCC--CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC--CCCCCcChHHHHHHH
Q psy5985 66 I-YEE--KFSIKDLQQDLYHMASKMAEGVQRGLILRNE--KCNDNYNTDFIYRLY 115 (153)
Q Consensus 66 i-PE~--~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE--G~~~~~~~~~l~~~~ 115 (153)
+ |-. +.+.+.+.+..+.+.+... +--|++-.= -.....+.+.+.++.
T Consensus 112 v~~P~y~~~s~~~l~~~f~~va~a~~---~lPiilYn~P~~tg~~l~~~~~~~La 163 (303)
T 2wkj_A 112 AVTPFYYPFSFEEHCDHYRAIIDSAD---GLPMVVYNIPALSGVKLTLDQINTLV 163 (303)
T ss_dssp EECCCSSCCCHHHHHHHHHHHHHHHT---TCCEEEEECHHHHCCCCCHHHHHHHH
T ss_pred ecCCCCCCCCHHHHHHHHHHHHHhCC---CCCEEEEeCccccCCCCCHHHHHHHh
Confidence 6 332 4577888887776654321 134555542 011234556676764
No 117
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=24.50 E-value=1.4e+02 Score=19.60 Aligned_cols=32 Identities=13% Similarity=0.048 Sum_probs=26.1
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+++.+.+++++.++|+-.+|.++-+|
T Consensus 85 ~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGii 116 (130)
T 3hf7_A 85 GTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLV 116 (130)
T ss_dssp TCBHHHHHHHHHHHCCCEEEEECTTSCEEEEE
T ss_pred CCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEe
Confidence 45688999999999999999998777664443
No 118
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=24.41 E-value=1.4e+02 Score=19.85 Aligned_cols=32 Identities=9% Similarity=-0.027 Sum_probs=27.3
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+++.+.+++++.+.|+-.+|.++-+|
T Consensus 33 ~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Giv 64 (150)
T 3lqn_A 33 GNGLEHALLVLVKSGYSAIPVLDPMYKLHGLI 64 (150)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTCBEEEEE
T ss_pred CCcHHHHHHHHHHcCCcEEEEECCCCCEEEEE
Confidence 45689999999999999999998888875555
No 119
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=24.40 E-value=1.1e+02 Score=18.65 Aligned_cols=30 Identities=10% Similarity=0.086 Sum_probs=23.4
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFA 40 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~i 40 (153)
++...++++.+.++++.+++|.= +|.++-|
T Consensus 8 ~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGI 37 (70)
T 3ghd_A 8 KDTVDRVAKILSRNKAGSAVVME-GDEILGV 37 (70)
T ss_dssp TCBHHHHHHHHHHTTCSEEEEEE-TTEEEEE
T ss_pred CCcHHHHHHHHHHcCCCEEEEEE-CCEEEEE
Confidence 45688999999999999999985 3444333
No 120
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=24.37 E-value=1.4e+02 Score=19.90 Aligned_cols=32 Identities=6% Similarity=0.190 Sum_probs=26.7
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+++.+.+++++.+.|+-.+|.++-+|
T Consensus 103 ~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Gii 134 (148)
T 3lv9_A 103 NLTIDKALERIRKEKLQLAIVVDEYGGTSGVV 134 (148)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSSEEEEE
T ss_pred CCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEE
Confidence 45689999999999999999998888765444
No 121
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=24.37 E-value=57 Score=26.03 Aligned_cols=40 Identities=15% Similarity=0.150 Sum_probs=30.9
Q ss_pred HcCCcEEEEEcCCCCeEEEEEecCCCcCHHHHHHHhhcCCCEEE--EcCC
Q psy5985 22 ELKIQALLIIGGFEVSFFALKTMGGYCGYLATVAGLAGGADAAY--IYEE 69 (153)
Q Consensus 22 ~~~Id~LvvIGGdgs~v~iVEvMGR~aG~LA~~aglA~gad~il--iPE~ 69 (153)
|..-..+.||||.-.| --+.+||..+++.+||+++. .|+.
T Consensus 27 Kg~~G~vlvigGs~~~--------~GA~~laa~aAlr~GaGlv~~~~~~~ 68 (279)
T 3rpz_A 27 KGTYGTALLLAGSDDM--------PGAALLAGLGAMRSGLGKLVIGTSEN 68 (279)
T ss_dssp GGGGCEEEEECCBTTB--------CHHHHHHHHHHHTTTCSEEEEEECTT
T ss_pred CcCCCEEEEEeCCCCC--------CcHHHHHHHHHHHhCCCeEEEEecHH
Confidence 5666689999998654 23678999999999999965 4664
No 122
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=24.12 E-value=2.8e+02 Score=22.21 Aligned_cols=101 Identities=11% Similarity=0.075 Sum_probs=59.3
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------EEEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS-----------------------FFALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~-----------------------v~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.|-+.++|+|++.|-.|=+ -.|+=| |.++=.=|. ..+-..|||.+
T Consensus 32 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv-g~~~t~~ai~la~~a~~~Gadav 110 (318)
T 3qfe_A 32 ASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGV-GAHSTRQVLEHINDASVAGANYV 110 (318)
T ss_dssp HHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC-CCSSHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-CCCCHHHHHHHHHHHHHcCCCEE
Confidence 457888999999999999999988865 223333 332222221 12223599986
Q ss_pred EEcCC-----CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCCC---CCCcChHHHHHHHH
Q psy5985 65 YIYEE-----KFSIKDLQQDLYHMASKMAEGVQRGLILRNEKC---NDNYNTDFIYRLYS 116 (153)
Q Consensus 65 liPE~-----~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG~---~~~~~~~~l~~~~~ 116 (153)
++.-. |.+.+.+.+..+.+.+. -+--|++-.==. ....+.+.+.++.+
T Consensus 111 lv~~P~y~~kp~~~~~l~~~f~~ia~a----~~lPiilYn~P~~t~g~~l~~~~~~~La~ 166 (318)
T 3qfe_A 111 LVLPPAYFGKATTPPVIKSFFDDVSCQ----SPLPVVIYNFPGVCNGIDLDSDMITTIAR 166 (318)
T ss_dssp EECCCCC---CCCHHHHHHHHHHHHHH----CSSCEEEEECCC----CCCCHHHHHHHHH
T ss_pred EEeCCcccCCCCCHHHHHHHHHHHHhh----CCCCEEEEeCCcccCCCCCCHHHHHHHHh
Confidence 65322 24678888877665432 234455554321 23345677777754
No 123
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=24.09 E-value=1.4e+02 Score=19.59 Aligned_cols=32 Identities=9% Similarity=0.053 Sum_probs=25.4
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+++.+.+++++.+.|+-.+|.++-+|
T Consensus 84 ~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Gii 115 (129)
T 3jtf_A 84 VKRLNVLLREFRASRNHLAIVIDEHGGISGLV 115 (129)
T ss_dssp TCBHHHHHHHHHTSSCCEEEEECC-CCEEEEE
T ss_pred CCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEE
Confidence 45689999999999999999998877664443
No 124
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=24.07 E-value=1.7e+02 Score=25.12 Aligned_cols=56 Identities=11% Similarity=-0.081 Sum_probs=36.9
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe---------EEEEEecCCCcC-HHHHHHHhhcCCCEEEEc
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS---------FFALKTMGGYCG-YLATVAGLAGGADAAYIY 67 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~---------v~iVEvMGR~aG-~LA~~aglA~gad~iliP 67 (153)
.+...+.+-|++.+|+...++.|+.|+ .+.+ ++++.+| .+|-+--=..|..++..|
T Consensus 233 gD~~eik~lL~~~Gi~v~~~~~g~~t~~ei~~~~~A~~ni-v~~~~~~~~~A~~Le~~~GiP~i~~~ 298 (492)
T 3u7q_A 233 GDAWSSRILLEEMGLRCVAQWSGDGSISEIELTPKVKLNL-VHCYRSMNYISRHMEEKYGIPWMEYN 298 (492)
T ss_dssp TTTHHHHHHHHHTTCEEEEEEETTCCHHHHHHGGGCSEEE-ESCHHHHHHHHHHHHHHHCCCEEECC
T ss_pred hhHHHHHHHHHHCCCeEEEEeCCCCCHHHHHhhhcCcEEE-EEChHHHHHHHHHHHHHhCCceEecC
Confidence 457788899999999999999999887 2333 4554333 222211122488888776
No 125
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=24.00 E-value=1.4e+02 Score=20.18 Aligned_cols=32 Identities=9% Similarity=-0.031 Sum_probs=27.2
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+++.+.+++++.+.|+-.+|.++-+|
T Consensus 32 ~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGiv 63 (159)
T 1yav_A 32 GNNLEHALLVLTKTGYTAIPVLDPSYRLHGLI 63 (159)
T ss_dssp TCBHHHHHHHHHHHCCSEEEEECTTCBEEEEE
T ss_pred CCcHHHHHHHHHhCCCcEEEEECCCCCEEEEe
Confidence 45688999999999999999998888775555
No 126
>1vdr_A DHFR, dihydrofolate reductase; oxidoreductase, halophilic enzyme; 2.55A {Haloferax volcanii} SCOP: c.71.1.1 PDB: 2ith_A 2jyb_A
Probab=23.81 E-value=59 Score=23.31 Aligned_cols=24 Identities=17% Similarity=0.299 Sum_probs=20.7
Q ss_pred cHHHHHHHHHHcCCcEEEEEcCCC
Q psy5985 12 KLPQIAAKLKELKIQALLIIGGFE 35 (153)
Q Consensus 12 ~~~~~~~~L~~~~Id~LvvIGGdg 35 (153)
..+.+++.|++.+.+-++||||-.
T Consensus 81 ~~~~~l~~l~~~~~~~i~viGG~~ 104 (162)
T 1vdr_A 81 SVEEAVDIAASLDAETAYVIGGAA 104 (162)
T ss_dssp SHHHHHHHHHHTTCSCEEEEECHH
T ss_pred CHHHHHHHHHhCCCCcEEEECCHH
Confidence 678899999988888899999954
No 127
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=23.80 E-value=2.8e+02 Score=22.12 Aligned_cols=101 Identities=16% Similarity=0.126 Sum_probs=57.5
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCe-----------------------EEEEEecCCCcCHHHH-HH--HhhcCC-C
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVS-----------------------FFALKTMGGYCGYLAT-VA--GLAGGA-D 62 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~-----------------------v~iVEvMGR~aG~LA~-~a--glA~ga-d 62 (153)
.+.+++.++.|-+.++|+|++.|..|=+ -.++=+ |.++=.=|. .+ +-..|+ |
T Consensus 27 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv-g~~~t~~ai~la~~A~~~Ga~d 105 (311)
T 3h5d_A 27 FDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGV-GTNDTRDSIEFVKEVAEFGGFA 105 (311)
T ss_dssp TTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC-CCSSHHHHHHHHHHHHHSCCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-CCcCHHHHHHHHHHHHhcCCCc
Confidence 4568999999999999999999998865 223322 332222121 11 122365 8
Q ss_pred EEEEc-C--CCCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC--CCCCCcChHHHHHHH
Q psy5985 63 AAYIY-E--EKFSIKDLQQDLYHMASKMAEGVQRGLILRNE--KCNDNYNTDFIYRLY 115 (153)
Q Consensus 63 ~iliP-E--~~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE--G~~~~~~~~~l~~~~ 115 (153)
.+++. - .+.+.+.+.+..+.+. +.-+--|++-.= -.+...+.+.+.++.
T Consensus 106 avlv~~P~y~~~s~~~l~~~f~~va----~a~~lPiilYn~P~~tg~~l~~~~~~~La 159 (311)
T 3h5d_A 106 AGLAIVPYYNKPSQEGMYQHFKAIA----DASDLPIIIYNIPGRVVVELTPETMLRLA 159 (311)
T ss_dssp EEEEECCCSSCCCHHHHHHHHHHHH----HSCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHHHHHH----HhCCCCEEEEecccccCCCCCHHHHHHHh
Confidence 76543 3 2557778877766543 222344555442 012234556777664
No 128
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=23.77 E-value=1.3e+02 Score=22.99 Aligned_cols=54 Identities=13% Similarity=-0.029 Sum_probs=31.3
Q ss_pred CCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHH-HHHHHHHHHHHHcCCCeEEEEEe
Q psy5985 45 GGYCGYLATVAGLAGGADAAYIYEEKFSIKDL-QQDLYHMASKMAEGVQRGLILRN 99 (153)
Q Consensus 45 GR~aG~LA~~aglA~gad~iliPE~~~~~~~l-~~~i~~i~~~~~~~~~~~iIvva 99 (153)
|...=-++++.+++..|+++++=|..-.+|.- .+.+..+.+++.+ ++..+|+++
T Consensus 146 gGqkQrv~iAraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~-~g~tvi~vt 200 (250)
T 2d2e_A 146 GGEKKRNEILQLLVLEPTYAVLDETDSGLDIDALKVVARGVNAMRG-PNFGALVIT 200 (250)
T ss_dssp --HHHHHHHHHHHHHCCSEEEEECGGGTTCHHHHHHHHHHHHHHCS-TTCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-cCCEEEEEe
Confidence 33334578899999999999998874333322 1222333444433 355666665
No 129
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=23.73 E-value=2.6e+02 Score=21.82 Aligned_cols=73 Identities=8% Similarity=0.112 Sum_probs=46.4
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe------------------E--EEEEecCCCcCHHHH---HHHhhcCCCEEEEc
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS------------------F--FALKTMGGYCGYLAT---VAGLAGGADAAYIY 67 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~------------------v--~iVEvMGR~aG~LA~---~aglA~gad~iliP 67 (153)
+.+++.++.+-+.++|+|++.|-.|=+ + .|+=| |.++=.=+. ..+-..|||.+++.
T Consensus 19 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gvi~Gv-g~~~t~~ai~la~~A~~~Gadavlv~ 97 (286)
T 2r91_A 19 ELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVIVQV-ASLNADEAIALAKYAESRGAEAVASL 97 (286)
T ss_dssp HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEEEEC-CCSSHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCEEEee-CCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 457888999999999999999988876 2 33333 222211111 11233599987764
Q ss_pred CC---C-CCHHHHHHHHHHHH
Q psy5985 68 EE---K-FSIKDLQQDLYHMA 84 (153)
Q Consensus 68 E~---~-~~~~~l~~~i~~i~ 84 (153)
-. + .+.+.+.+..+.+.
T Consensus 98 ~P~y~~~~s~~~l~~~f~~va 118 (286)
T 2r91_A 98 PPYYFPRLSERQIAKYFRDLC 118 (286)
T ss_dssp CSCSSTTCCHHHHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHHHHHH
Confidence 32 4 56788887776654
No 130
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=23.51 E-value=1.4e+02 Score=20.40 Aligned_cols=32 Identities=19% Similarity=0.203 Sum_probs=27.7
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+++.+.+++++.+.|+..+|.++-+|
T Consensus 43 ~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Giv 74 (165)
T 3fhm_A 43 DVSIGEAAGTLHAHKIGAVVVTDADGVVLGIF 74 (165)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEE
Confidence 45688999999999999999999888886666
No 131
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=23.46 E-value=1.6e+02 Score=19.63 Aligned_cols=32 Identities=9% Similarity=-0.053 Sum_probs=27.1
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+.+.+.+++++.+.|+-.+|.++-+|
T Consensus 29 ~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Giv 60 (157)
T 2emq_A 29 GNYLDHALLVLTKTGYSAIPVLDTSYKLHGLI 60 (157)
T ss_dssp TSBHHHHHHHHHHSSSSEEEEECTTCCEEEEE
T ss_pred CCcHHHHHHHHHHCCceEEEEEcCCCCEEEEe
Confidence 45688999999999999999998888775555
No 132
>3ovk_A Aminopeptidase P, XAA-Pro dipeptidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.00A {Streptococcus pyogenes}
Probab=23.39 E-value=58 Score=22.17 Aligned_cols=21 Identities=24% Similarity=0.377 Sum_probs=17.7
Q ss_pred cHHHHHHHHHHcCCcEEEEEc
Q psy5985 12 KLPQIAAKLKELKIQALLIIG 32 (153)
Q Consensus 12 ~~~~~~~~L~~~~Id~LvvIG 32 (153)
.++++.+.|+++++|++++-.
T Consensus 11 Rl~~l~~~m~~~~~da~li~~ 31 (132)
T 3ovk_A 11 RLGHCLRQMAEKGLEALLVTH 31 (132)
T ss_dssp HHHHHHHHHHHHTCCEEEECS
T ss_pred HHHHHHHHHHHCCCCEEEEcC
Confidence 367788899999999999865
No 133
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=23.26 E-value=1.6e+02 Score=19.13 Aligned_cols=33 Identities=9% Similarity=-0.065 Sum_probs=21.5
Q ss_pred HHHHhhcCCCEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy5985 53 TVAGLAGGADAAYIYEEKFSIKDLQQDLYHMASKM 87 (153)
Q Consensus 53 ~~aglA~gad~iliPE~~~~~~~l~~~i~~i~~~~ 87 (153)
...++..|++.++.- |++.+++.+.++.+.++.
T Consensus 97 ~~~~~~~g~~~~l~k--p~~~~~L~~~i~~~~~~~ 129 (147)
T 2zay_A 97 EAQLLDMGFIDFIAK--PVNAIRLSARIKRVLKLL 129 (147)
T ss_dssp HHHHHHHTCSEEEES--SCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEeC--CCCHHHHHHHHHHHHHHH
Confidence 445566777766533 778888888776655443
No 134
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=23.17 E-value=1.6e+02 Score=19.23 Aligned_cols=32 Identities=13% Similarity=0.307 Sum_probs=26.2
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
.+....+++.+.+++++.+.|+-.+|.++-+|
T Consensus 99 ~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Gii 130 (144)
T 2nyc_A 99 NDKLSTIMDNIRKARVHRFFVVDDVGRLVGVL 130 (144)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSBEEEEE
T ss_pred CCcHHHHHHHHHHCCCCEEEEECCCCCEEEEE
Confidence 45689999999999999999998777664443
No 135
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=23.01 E-value=1.4e+02 Score=20.18 Aligned_cols=32 Identities=9% Similarity=0.283 Sum_probs=26.2
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+++.+.+++++.+.|+-.+|.++-+|
T Consensus 101 ~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGiv 132 (153)
T 3oco_A 101 NMKVPDVMEEMSAHRVPMAIVIDEYGGTSGII 132 (153)
T ss_dssp TSBHHHHHHHHHHTTCSCEEEECTTSCEEEEE
T ss_pred CCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEe
Confidence 45688999999999999999998887664443
No 136
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=22.83 E-value=2.9e+02 Score=21.90 Aligned_cols=100 Identities=19% Similarity=0.141 Sum_probs=57.6
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------E-EEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS----------------------F-FALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~----------------------v-~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.+-+.++|+|++.|-.|=+ + .|+=| |.++=.=|. ..+-..|||.+
T Consensus 37 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv-g~~st~~ai~la~~A~~~Gadav 115 (304)
T 3cpr_A 37 AAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGV-GTNNTRTSVELAEAAASAGADGL 115 (304)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC-CCSCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC-CCCCHHHHHHHHHHHHhcCCCEE
Confidence 358889999999999999999988876 3 33333 333222221 11233599987
Q ss_pred EE-cCC--CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCC--CCCCcChHHHHHHH
Q psy5985 65 YI-YEE--KFSIKDLQQDLYHMASKMAEGVQRGLILRNEK--CNDNYNTDFIYRLY 115 (153)
Q Consensus 65 li-PE~--~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG--~~~~~~~~~l~~~~ 115 (153)
++ |-. +.+.+.+.+..+.+.+. -+--|++-.== .+...+.+.+.++.
T Consensus 116 lv~~P~y~~~~~~~l~~~f~~ia~a----~~lPiilYn~P~~tg~~l~~~~~~~La 167 (304)
T 3cpr_A 116 LVVTPYYSKPSQEGLLAHFGAIAAA----TEVPICLYDIPGRSGIPIESDTMRRLS 167 (304)
T ss_dssp EEECCCSSCCCHHHHHHHHHHHHHH----CCSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHh----cCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 65 332 45778888777665432 12345554420 11223456666653
No 137
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=22.69 E-value=1e+02 Score=23.86 Aligned_cols=53 Identities=19% Similarity=0.209 Sum_probs=36.4
Q ss_pred cCCCcCHHHHHHHhhcCCCEEEEc--CCCCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC
Q psy5985 44 MGGYCGYLATVAGLAGGADAAYIY--EEKFSIKDLQQDLYHMASKMAEGVQRGLILRNE 100 (153)
Q Consensus 44 MGR~aG~LA~~aglA~gad~iliP--E~~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE 100 (153)
-|.+.|.+.....-+.|||++++- |...+..++.+.++.. .+..=..|+.|.|
T Consensus 72 ~Ga~TGeis~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A----~~~GL~~ivcVge 126 (225)
T 1hg3_A 72 PGSHTGHVLPEAVKEAGAVGTLLNHSENRMILADLEAAIRRA----EEVGLMTMVCSNN 126 (225)
T ss_dssp SBSCTTCCCHHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHH----HHHTCEEEEEESS
T ss_pred CCCccCcccHHHHHHcCCCEEEECcchhcCCHHHHHHHHHHH----HHCCCEEEEEeCC
Confidence 599999999999999999999987 4457777765554431 1112335666665
No 138
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=22.50 E-value=1.7e+02 Score=19.09 Aligned_cols=32 Identities=9% Similarity=0.122 Sum_probs=26.9
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+.+.+.+++++.+.|+..+|.++-+|
T Consensus 23 ~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Giv 54 (138)
T 2yzi_A 23 STSVQEASRLMMEFDVGSLVVINDDGNVVGFF 54 (138)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSCEEEEE
T ss_pred CCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEE
Confidence 45688999999999999999998888775555
No 139
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=22.45 E-value=1.6e+02 Score=19.83 Aligned_cols=32 Identities=19% Similarity=0.275 Sum_probs=26.5
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
.+....+++.+.+++++.|.|+-.+|.++-+|
T Consensus 109 ~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGii 140 (152)
T 2uv4_A 109 HETLETIINRLVEAEVHRLVVVDENDVVKGIV 140 (152)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSBEEEEE
T ss_pred CCcHHHHHHHHHHcCCeEEEEECCCCeEEEEE
Confidence 45689999999999999999998877665444
No 140
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=22.24 E-value=2.9e+02 Score=21.71 Aligned_cols=73 Identities=18% Similarity=0.047 Sum_probs=46.6
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe------------------E--EEEEecCCCcCHHHH---HHHhhcCCCEEEE-
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS------------------F--FALKTMGGYCGYLAT---VAGLAGGADAAYI- 66 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~------------------v--~iVEvMGR~aG~LA~---~aglA~gad~ili- 66 (153)
+.+++.++.+-+.++|+|++.|-.|=+ + .|+=| |.++=.=|. ..+-..|||.+++
T Consensus 20 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~gviaGv-g~~~t~~ai~la~~A~~~Gadavlv~ 98 (293)
T 1w3i_A 20 EKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKIIFQV-GGLNLDDAIRLAKLSKDFDIVGIASY 98 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEEEEC-CCSCHHHHHHHHHHGGGSCCSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCCEEEec-CCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 458888999999999999999988876 2 23333 322212121 1122359998766
Q ss_pred cCC--C-CCHHHHHHHHHHHH
Q psy5985 67 YEE--K-FSIKDLQQDLYHMA 84 (153)
Q Consensus 67 PE~--~-~~~~~l~~~i~~i~ 84 (153)
|-. + .+.+.+.+..+.+.
T Consensus 99 ~P~y~~~~s~~~l~~~f~~va 119 (293)
T 1w3i_A 99 APYYYPRMSEKHLVKYFKTLC 119 (293)
T ss_dssp CCCSCSSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHH
Confidence 332 4 57788887776654
No 141
>2o3a_A UPF0106 protein AF_0751; structural genomics, unknown function, PSI-2, protein structure initiative; 2.20A {Archaeoglobus fulgidus} SCOP: c.116.1.8
Probab=22.12 E-value=1.6e+02 Score=22.42 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=21.5
Q ss_pred HHHHHHhh---cCCCEEEEcCCCCCHHHHHHHHHHHHHH
Q psy5985 51 LATVAGLA---GGADAAYIYEEKFSIKDLQQDLYHMASK 86 (153)
Q Consensus 51 LA~~aglA---~gad~iliPE~~~~~~~l~~~i~~i~~~ 86 (153)
++++.||. -||+-++++.. | +.+.+.++.+.+|
T Consensus 20 iTTHV~LtARAfGA~~iil~~~--D-~~v~esv~dV~~r 55 (178)
T 2o3a_A 20 ISTHVALTARAFGAKGIYFDTE--D-KSVFESVRDVVER 55 (178)
T ss_dssp HHHHHHHHHHHTTCSEEEESSC--C-HHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhCCCeeEEeCC--C-HHHHHHHHHHHHh
Confidence 45555554 49999999987 4 4555555555444
No 142
>2xw7_A Dihydrofolate reductase; oxidoreductase, NADPH; HET: PG4 NDP; 2.00A {Mycobacterium smegmatis}
Probab=21.91 E-value=72 Score=22.95 Aligned_cols=25 Identities=12% Similarity=0.287 Sum_probs=21.0
Q ss_pred CcHHHHHHHHHHc-CCcEEEEEcCCC
Q psy5985 11 KKLPQIAAKLKEL-KIQALLIIGGFE 35 (153)
Q Consensus 11 e~~~~~~~~L~~~-~Id~LvvIGGdg 35 (153)
.+...+++.|++. +++-++++||-.
T Consensus 94 ~dl~~~l~~L~~~~~~~~v~v~GG~~ 119 (178)
T 2xw7_A 94 GDVAELHPELVAAAGGKDVWVVGGGD 119 (178)
T ss_dssp SCHHHHHHHHHHHTTTSEEEEEECHH
T ss_pred CCHHHHHHHHHhccCCCcEEEEccHH
Confidence 4688999999987 579999999954
No 143
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=21.88 E-value=1.6e+02 Score=19.66 Aligned_cols=32 Identities=6% Similarity=-0.064 Sum_probs=27.0
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+++.+.+++++.+.|+-.+|.++-+|
T Consensus 46 ~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Giv 77 (149)
T 3k2v_A 46 QATLRDALLEITRKNLGMTAICDDDMNIIGIF 77 (149)
T ss_dssp TCBHHHHHHHHHHHTSSEEEEECTTCBEEEEE
T ss_pred CCcHHHHHHHHHhCCCcEEEEECCCCcEEEEe
Confidence 45689999999999999999998888775554
No 144
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=21.86 E-value=1.6e+02 Score=22.88 Aligned_cols=52 Identities=13% Similarity=0.037 Sum_probs=30.3
Q ss_pred cHHHHHHHHHHcCCcEEEEEcCCCCeEEEEEecCCCcCHHHHHHHhhc------CCCEEEEcCCC
Q psy5985 12 KLPQIAAKLKELKIQALLIIGGFEVSFFALKTMGGYCGYLATVAGLAG------GADAAYIYEEK 70 (153)
Q Consensus 12 ~~~~~~~~L~~~~Id~LvvIGGdgs~v~iVEvMGR~aG~LA~~aglA~------gad~iliPE~~ 70 (153)
..+++.+.|+..++..+. ... +-+.-|...=-++++.+++. .|+++++=|..
T Consensus 118 ~~~~~~~~l~~~~l~~~~-----~~~--~~~LSgGq~QRv~iAraL~~~~~~~~~p~lLllDEPt 175 (266)
T 4g1u_C 118 DRQALQQVMAQTDCLALA-----QRD--YRVLSGGEQQRVQLARVLAQLWQPQPTPRWLFLDEPT 175 (266)
T ss_dssp HHHHHHHHHHHTTCSTTT-----TSB--GGGCCHHHHHHHHHHHHHHHTCCSSCCCEEEEECCCC
T ss_pred HHHHHHHHHHHcCChhHh-----cCC--cccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCcc
Confidence 455666777777765320 000 00111111225888999998 99999988764
No 145
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=21.52 E-value=3e+02 Score=21.60 Aligned_cols=100 Identities=21% Similarity=0.205 Sum_probs=58.7
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe----------------------E-EEEEecCCCcCHHHH---HHHhhcCCCEE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS----------------------F-FALKTMGGYCGYLAT---VAGLAGGADAA 64 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~----------------------v-~iVEvMGR~aG~LA~---~aglA~gad~i 64 (153)
+.+++.++.+-+.++|+|++.|-.|=+ + .|+=| |.++=.=|. ..+-+.|||.+
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv-g~~~t~~ai~la~~A~~~Gadav 99 (294)
T 2ehh_A 21 EALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGT-GGNATHEAVHLTAHAKEVGADGA 99 (294)
T ss_dssp HHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC-CCSCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec-CCCCHHHHHHHHHHHHhcCCCEE
Confidence 457888999999999999999988876 3 33333 332222221 12233699987
Q ss_pred EE-cCC--CCCHHHHHHHHHHHHHHHHcCCCeEEEEEeCC--CCCCcChHHHHHHH
Q psy5985 65 YI-YEE--KFSIKDLQQDLYHMASKMAEGVQRGLILRNEK--CNDNYNTDFIYRLY 115 (153)
Q Consensus 65 li-PE~--~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaEG--~~~~~~~~~l~~~~ 115 (153)
++ |-. +.+.+.+.+..+.+.+. -+--|++-.== .+...+.+.+.++.
T Consensus 100 lv~~P~y~~~s~~~l~~~f~~va~a----~~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 100 LVVVPYYNKPTQRGLYEHFKTVAQE----VDIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp EEECCCSSCCCHHHHHHHHHHHHHH----CCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHh----cCCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 66 332 45778888777665432 12345554420 11234566777765
No 146
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=21.49 E-value=2.3e+02 Score=20.68 Aligned_cols=58 Identities=14% Similarity=0.119 Sum_probs=37.7
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe------------------EEEEEecCCCcCHHHHHHHhhcCCCEEEEcCC
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS------------------FFALKTMGGYCGYLATVAGLAGGADAAYIYEE 69 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~------------------v~iVEvMGR~aG~LA~~aglA~gad~iliPE~ 69 (153)
+...+.++.+.+.++|+|.+..-+.+. +- +-+.|.-.-.-.+..+++.|||.+.++-.
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~ip-vi~~g~i~~~~~~~~~~~~Gad~V~i~~~ 108 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIP-VLVGGGVRSLEDATTLFRAGADKVSVNTA 108 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCSSC-EEEESSCCSHHHHHHHHHHTCSEEEESHH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcCCC-EEEECCCCCHHHHHHHHHcCCCEEEEChH
Confidence 456778899999999999988655432 11 22344333222345566779999998743
No 147
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=21.45 E-value=1.6e+02 Score=18.38 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=21.4
Q ss_pred HHHHhhcCCCEEEEcCCCCCHHHHHHHHHHHHHH
Q psy5985 53 TVAGLAGGADAAYIYEEKFSIKDLQQDLYHMASK 86 (153)
Q Consensus 53 ~~aglA~gad~iliPE~~~~~~~l~~~i~~i~~~ 86 (153)
...++..||+-.+.- |++.+++...++.+.++
T Consensus 88 ~~~~~~~ga~~~l~K--p~~~~~l~~~i~~~~~~ 119 (122)
T 1zgz_A 88 RIVGLEMGADDYVTK--PLELRELVVRVKNLLWR 119 (122)
T ss_dssp HHHHHHHTCSEEEES--SCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCHHHHccC--CCCHHHHHHHHHHHHHH
Confidence 455666787776543 67888888877665544
No 148
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=21.45 E-value=58 Score=26.44 Aligned_cols=25 Identities=20% Similarity=0.373 Sum_probs=21.8
Q ss_pred CcHHHHHHHHHHcCC---cEEEEEcCCC
Q psy5985 11 KKLPQIAAKLKELKI---QALLIIGGFE 35 (153)
Q Consensus 11 e~~~~~~~~L~~~~I---d~LvvIGGdg 35 (153)
+..+++++.++++++ |.+|-+||=-
T Consensus 69 ~~v~~~~~~~~~~~~~r~d~iIavGGGs 96 (343)
T 3clh_A 69 HSLERILNNAFEMQLNRHSLMIALGGGV 96 (343)
T ss_dssp HHHHHHHHHHHHTTCCTTCEEEEEESHH
T ss_pred HHHHHHHHHHHhcCCCCCceEEEECChH
Confidence 468899999999999 9999999843
No 149
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=21.39 E-value=2.4e+02 Score=26.01 Aligned_cols=58 Identities=14% Similarity=0.110 Sum_probs=36.3
Q ss_pred cHHHHHHHHHHcCC-cEEEEEcCCCCeEEEEEecCCCcCHHHHHHHhhcCCCEEEEcCCCCCHHHHHHHHHHHH
Q psy5985 12 KLPQIAAKLKELKI-QALLIIGGFEVSFFALKTMGGYCGYLATVAGLAGGADAAYIYEEKFSIKDLQQDLYHMA 84 (153)
Q Consensus 12 ~~~~~~~~L~~~~I-d~LvvIGGdgs~v~iVEvMGR~aG~LA~~aglA~gad~iliPE~~~~~~~l~~~i~~i~ 84 (153)
.++.+++.|++.++ |.+|++||-- .. + . .......|+|.++-|.. +..+..+.+....
T Consensus 671 ~~~~vi~~Lr~~G~~dv~VivGG~~---------P~-~-d--~~~l~~~GaD~~f~pgt--d~~e~~~~i~~~l 729 (762)
T 2xij_A 671 LVPELIKELNSLGRPDILVMCGGVI---------PP-Q-D--YEFLFEVGVSNVFGPGT--RIPKAAVQVLDDI 729 (762)
T ss_dssp HHHHHHHHHHHTTCTTSEEEEEESC---------CG-G-G--HHHHHHHTCCEEECTTC--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCC---------Cc-c-c--HHHHHhCCCCEEeCCCC--CHHHHHHHHHHHH
Confidence 46677777777777 6677777711 00 0 1 12235679999998876 6667776665443
No 150
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=20.78 E-value=1.7e+02 Score=23.86 Aligned_cols=24 Identities=13% Similarity=0.077 Sum_probs=19.2
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCCH
Q psy5985 50 YLATVAGLAGGADAAYIYEEKFSI 73 (153)
Q Consensus 50 ~LA~~aglA~gad~iliPE~~~~~ 73 (153)
-+|++.||+..|+++++=|.--.+
T Consensus 135 RvalAraL~~~P~lLLLDEP~s~L 158 (348)
T 3d31_A 135 RVALARALVTNPKILLLDEPLSAL 158 (348)
T ss_dssp HHHHHHHTTSCCSEEEEESSSTTS
T ss_pred HHHHHHHHHcCCCEEEEECccccC
Confidence 568899999999999998864333
No 151
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=20.68 E-value=56 Score=27.20 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=21.7
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCC
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGF 34 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGd 34 (153)
.+..+++++.+++.+.|.+|-|||-
T Consensus 92 ~~~v~~~~~~~~~~~~d~IIavGGG 116 (387)
T 3uhj_A 92 TSEIERVRKVAIEHGSDILVGVGGG 116 (387)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESSH
T ss_pred HHHHHHHHHHHhhcCCCEEEEeCCc
Confidence 4568899999999999999999983
No 152
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=20.58 E-value=1.6e+02 Score=19.02 Aligned_cols=31 Identities=13% Similarity=0.089 Sum_probs=25.2
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
.....++++.+.+++++.+.|+.+ |.++-+|
T Consensus 21 ~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Giv 51 (128)
T 3gby_A 21 GGSTADAARRLAASGCACAPVLDG-ERYLGMV 51 (128)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEEET-TEEEEEE
T ss_pred CCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEE
Confidence 456899999999999999999887 7664444
No 153
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=20.52 E-value=3.2e+02 Score=21.55 Aligned_cols=101 Identities=20% Similarity=0.179 Sum_probs=57.8
Q ss_pred CcHHHHHHHHHHcCCcEEEEEcCCCCe------------------------EEEEEecCCCcCHHHH---HHHhhcCCCE
Q psy5985 11 KKLPQIAAKLKELKIQALLIIGGFEVS------------------------FFALKTMGGYCGYLAT---VAGLAGGADA 63 (153)
Q Consensus 11 e~~~~~~~~L~~~~Id~LvvIGGdgs~------------------------v~iVEvMGR~aG~LA~---~aglA~gad~ 63 (153)
+.+++.++.+-+.++|+|++.|-.|-+ -.++= -|.++=.=|. ..+-+.|||.
T Consensus 28 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaG-vg~~~t~~ai~la~~a~~~Gada 106 (301)
T 3m5v_A 28 QSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAG-AGSNATHEAVGLAKFAKEHGADG 106 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEE-CCCSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEe-CCCCCHHHHHHHHHHHHHcCCCE
Confidence 457888999999999999999988876 12222 2222211111 1122359998
Q ss_pred EEEcC---CCCCHHHHHHHHHHHHHHHHcCCCeEEEEEeC--CCCCCcChHHHHHHHH
Q psy5985 64 AYIYE---EKFSIKDLQQDLYHMASKMAEGVQRGLILRNE--KCNDNYNTDFIYRLYS 116 (153)
Q Consensus 64 iliPE---~~~~~~~l~~~i~~i~~~~~~~~~~~iIvvaE--G~~~~~~~~~l~~~~~ 116 (153)
+++.- .+.+.+.+.+..+.+.+. -+--|++-.= -.+...+.+.+.++.+
T Consensus 107 vlv~~P~y~~~s~~~l~~~f~~va~a----~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (301)
T 3m5v_A 107 ILSVAPYYNKPTQQGLYEHYKAIAQS----VDIPVLLYNVPGRTGCEISTDTIIKLFR 160 (301)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHHH----CSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred EEEcCCCCCCCCHHHHHHHHHHHHHh----CCCCEEEEeCchhhCcCCCHHHHHHHHh
Confidence 76643 255778888777665432 2334555442 0122345567777643
No 154
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=20.33 E-value=1.8e+02 Score=19.75 Aligned_cols=32 Identities=13% Similarity=0.137 Sum_probs=27.1
Q ss_pred CCcHHHHHHHHHHcCCcEEEEEcCCCCeEEEE
Q psy5985 10 EKKLPQIAAKLKELKIQALLIIGGFEVSFFAL 41 (153)
Q Consensus 10 ~e~~~~~~~~L~~~~Id~LvvIGGdgs~v~iV 41 (153)
......+++.+.+.+++.+.|+-.+|.++-+|
T Consensus 21 ~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGiv 52 (160)
T 2o16_A 21 THTLNDAKHLMEALDIRHVPIVDANKKLLGIV 52 (160)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTCBEEEEE
T ss_pred CCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEE
Confidence 45689999999999999999998888875555
No 155
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=20.27 E-value=2.6e+02 Score=21.24 Aligned_cols=48 Identities=13% Similarity=0.128 Sum_probs=29.2
Q ss_pred HHHHHHHhhcCCCEEEEcCCCCCHHHHH-HHHHHHHHHHHcCCCeEEEEEe
Q psy5985 50 YLATVAGLAGGADAAYIYEEKFSIKDLQ-QDLYHMASKMAEGVQRGLILRN 99 (153)
Q Consensus 50 ~LA~~aglA~gad~iliPE~~~~~~~l~-~~i~~i~~~~~~~~~~~iIvva 99 (153)
-+|++.+++..|+++++=|..-.+|... +.+..+.+++.+ +..+|+++
T Consensus 153 Rv~iAraL~~~p~lllLDEPts~LD~~~~~~i~~~l~~~~~--g~tviivt 201 (247)
T 2ff7_A 153 RIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICK--GRTVIIIA 201 (247)
T ss_dssp HHHHHHHHTTCCSEEEECCCCSCCCHHHHHHHHHHHHHHHT--TSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC--CCEEEEEe
Confidence 5788899999999999988644333222 222333334432 45666665
No 156
>3vsj_A 2-amino-5-chlorophenol 1,6-dioxygenase alpha SUBU; CNBC,oxidoreductase, 2-His-1-carboxylate facial triad motif, extradiol dioxygenase,; HET: 2XP; 2.30A {Comamonas testosteroni} PDB: 3vsh_A 3vsi_A* 3vsg_A*
Probab=20.26 E-value=47 Score=25.99 Aligned_cols=36 Identities=11% Similarity=0.011 Sum_probs=26.0
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHcCCCeEEEEEe
Q psy5985 63 AAYIYEEKFSIKDLQQDLYHMASKMAEGVQRGLILRN 99 (153)
Q Consensus 63 ~iliPE~~~~~~~l~~~i~~i~~~~~~~~~~~iIvva 99 (153)
.+++||.+ ..+.+.+..+++.+++.+.+...|||++
T Consensus 15 ~~l~pe~~-~~~~~~~a~~~~~~~l~~~~Pd~ivvis 50 (271)
T 3vsj_A 15 PQLKPEVP-SWGQLAAATERAGKALAASRPDVVLVYS 50 (271)
T ss_dssp HHHCTTSH-HHHHHHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred cCCCCCch-HHHHHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 36778887 6677777777777777766666777765
No 157
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=20.00 E-value=2.2e+02 Score=21.86 Aligned_cols=49 Identities=14% Similarity=0.102 Sum_probs=29.8
Q ss_pred CHHHHHHHhhcCCCEEEEcCCCCCHHHHH-HHHHHHHHHHHcCCCeEEEEEe
Q psy5985 49 GYLATVAGLAGGADAAYIYEEKFSIKDLQ-QDLYHMASKMAEGVQRGLILRN 99 (153)
Q Consensus 49 G~LA~~aglA~gad~iliPE~~~~~~~l~-~~i~~i~~~~~~~~~~~iIvva 99 (153)
=-+|++.+++..|+++++=|..-.+|... +.+..+.+++.+ +..+|+++
T Consensus 162 qRv~lAraL~~~p~lllLDEPts~LD~~~~~~i~~~l~~l~~--~~tviivt 211 (260)
T 2ghi_A 162 QRIAIARCLLKDPKIVIFDEATSSLDSKTEYLFQKAVEDLRK--NRTLIIIA 211 (260)
T ss_dssp HHHHHHHHHHHCCSEEEEECCCCTTCHHHHHHHHHHHHHHTT--TSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEECccccCCHHHHHHHHHHHHHhcC--CCEEEEEc
Confidence 35788999999999999988644443322 223333444433 44566655
Done!