Query psy5988
Match_columns 68
No_of_seqs 133 out of 1042
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 23:42:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5988.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5988hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pfk_A Phosphofructokinase; tr 99.7 2.5E-18 8.5E-23 123.0 4.7 53 14-68 12-64 (320)
2 1zxx_A 6-phosphofructokinase; 99.7 2.3E-18 7.7E-23 123.2 4.4 53 14-68 11-63 (319)
3 4a3s_A 6-phosphofructokinase; 99.7 1.7E-17 5.7E-22 118.4 5.0 53 14-68 11-63 (319)
4 3o8o_A 6-phosphofructokinase s 99.7 5.6E-17 1.9E-21 126.6 5.0 60 9-68 6-69 (787)
5 3o8l_A 6-phosphofructokinase, 99.7 7.1E-17 2.4E-21 125.7 5.0 59 8-68 400-462 (762)
6 3opy_A 6-phosphofructo-1-kinas 99.6 9.9E-17 3.4E-21 127.4 4.9 60 9-68 211-274 (989)
7 3o8l_A 6-phosphofructokinase, 99.6 4.8E-17 1.6E-21 126.6 2.8 60 9-68 16-79 (762)
8 3o8o_B 6-phosphofructokinase s 99.6 1.3E-16 4.4E-21 124.3 4.7 60 9-68 4-68 (766)
9 3o8o_B 6-phosphofructokinase s 99.6 1.7E-16 5.7E-21 123.7 4.6 58 9-68 394-456 (766)
10 3o8o_A 6-phosphofructokinase s 99.6 1.7E-16 5.7E-21 124.0 4.6 58 9-68 394-456 (787)
11 3opy_B 6-phosphofructo-1-kinas 99.6 2E-16 6.8E-21 125.3 4.6 59 8-68 571-634 (941)
12 3opy_B 6-phosphofructo-1-kinas 99.6 2.1E-16 7.2E-21 125.2 3.9 60 9-68 182-246 (941)
13 3opy_A 6-phosphofructo-1-kinas 99.6 4.1E-16 1.4E-20 123.9 4.2 59 8-68 598-661 (989)
14 2hig_A 6-phospho-1-fructokinas 99.6 8E-16 2.7E-20 115.2 4.0 55 14-68 107-164 (487)
15 3hno_A Pyrophosphate-dependent 99.6 1.5E-15 5.2E-20 111.7 3.7 52 14-67 13-70 (419)
16 2f48_A Diphosphate--fructose-6 99.6 1.2E-15 4.1E-20 115.5 2.9 58 9-68 73-136 (555)
17 2ciw_A Chloroperoxidase; oxido 62.3 1.8 6.2E-05 30.6 0.3 9 14-22 28-36 (299)
18 2lq1_A De novo designed antifr 50.0 2.9 9.9E-05 19.3 -0.3 18 12-29 3-20 (26)
19 1im5_A 180AA long hypothetical 41.3 23 0.00078 21.8 2.9 29 20-48 131-159 (180)
20 1j2r_A Hypothetical isochorism 41.1 23 0.00078 22.2 2.9 29 20-48 143-171 (199)
21 3c5y_A Ribose/galactose isomer 40.8 16 0.00055 25.0 2.3 34 7-40 18-55 (231)
22 1x9g_A Putative MAR1; structur 40.5 25 0.00086 22.5 3.1 29 20-48 118-146 (200)
23 3lqy_A Putative isochorismatas 39.7 23 0.0008 22.1 2.8 29 20-48 124-152 (190)
24 3eef_A N-carbamoylsarcosine am 39.4 25 0.00087 21.8 2.9 27 20-46 121-147 (182)
25 3hb7_A Isochorismatase hydrola 38.9 25 0.00087 22.3 2.9 28 20-47 131-158 (204)
26 1nf9_A Phenazine biosynthesis 38.0 27 0.00092 22.0 2.9 28 20-47 153-180 (207)
27 3hu5_A Isochorismatase family 37.8 27 0.00093 22.1 2.9 28 20-47 137-164 (204)
28 2b34_A F35G2.2, MAR1 ribonucle 37.6 27 0.00094 22.2 2.9 29 20-48 112-140 (199)
29 4h17_A Hydrolase, isochorismat 36.9 29 0.00098 22.0 2.9 28 20-47 134-161 (197)
30 3mcw_A Putative hydrolase; iso 36.8 29 0.00099 21.9 2.9 28 20-47 124-151 (198)
31 2a67_A Isochorismatase family 36.5 26 0.00088 21.5 2.6 29 20-48 112-140 (167)
32 3oqp_A Putative isochorismatas 36.0 30 0.001 22.3 2.9 28 20-47 120-147 (211)
33 3irv_A Cysteine hydrolase; str 35.5 30 0.001 22.5 2.9 28 20-47 150-177 (233)
34 1yzv_A Hypothetical protein; s 34.7 32 0.0011 22.0 2.9 29 20-48 121-149 (204)
35 3kl2_A Putative isochorismatas 34.4 33 0.0011 22.2 2.9 28 20-47 162-189 (226)
36 3txy_A Isochorismatase family 33.3 36 0.0012 21.5 2.9 29 20-48 137-165 (199)
37 3tg2_A Vibriobactin-specific i 32.7 36 0.0012 22.2 2.9 28 20-47 149-176 (223)
38 2kxa_A Haemagglutinin HA2 chai 32.3 1.7 5.7E-05 21.0 -2.7 11 40-50 10-20 (30)
39 2wt9_A Nicotinamidase; hydrola 31.7 38 0.0013 22.0 2.9 29 20-48 178-206 (235)
40 1nba_A N-carbamoylsarcosine am 30.5 41 0.0014 22.5 3.0 29 20-48 175-203 (264)
41 3gbc_A Pyrazinamidase/nicotina 29.7 45 0.0015 20.9 2.9 29 20-48 136-164 (186)
42 3ku3_B Hemagglutinin HA2 chain 29.4 16 0.00053 24.1 0.6 11 40-50 10-20 (174)
43 3o94_A Nicotinamidase; hydrola 29.2 45 0.0015 21.6 2.9 29 20-48 154-182 (211)
44 3ot4_A Putative isochorismatas 28.1 45 0.0015 21.9 2.8 28 20-47 170-197 (236)
45 3m5g_B Hemagglutinin; influenz 27.2 18 0.00061 23.9 0.6 11 40-50 10-20 (182)
46 4i78_C Hemagglutinin HA2; infl 26.2 16 0.00054 24.2 0.2 11 40-50 10-20 (181)
47 2fq1_A Isochorismatase; ENTB, 26.2 53 0.0018 21.8 2.9 29 20-48 156-184 (287)
48 2wrg_I Hemagglutinin HA2 chain 26.0 19 0.00066 24.5 0.6 11 40-50 10-20 (222)
49 1jsd_B Haemagglutinin (HA2 cha 25.9 20 0.00067 23.6 0.6 11 40-50 10-20 (176)
50 1mqm_B Hemagglutinin HA2 chain 25.9 19 0.00066 24.4 0.6 11 40-50 10-20 (221)
51 2rft_B Influenza B hemagglutin 25.4 19 0.00063 23.7 0.5 11 40-50 10-20 (176)
52 3r2j_A Alpha/beta-hydrolase-li 25.2 58 0.002 21.2 2.9 31 20-50 168-198 (227)
53 2qq8_A TBC1 domain family memb 25.0 37 0.0013 23.1 2.0 25 2-26 140-164 (334)
54 3hzj_A Rabgap1L, RAB GTPase-ac 24.5 54 0.0018 21.9 2.7 25 3-27 102-126 (310)
55 4g9b_A Beta-PGM, beta-phosphog 24.3 57 0.002 20.3 2.7 20 27-46 179-198 (243)
56 3v8e_A Nicotinamidase; hydrola 23.2 68 0.0023 20.6 2.9 29 20-48 165-193 (216)
57 3fwz_A Inner membrane protein 23.1 84 0.0029 18.1 3.1 25 18-42 14-38 (140)
58 3jx9_A Putative phosphoheptose 22.4 80 0.0027 20.0 3.1 27 16-42 86-112 (170)
59 1yac_A Ycacgp, YCAC gene produ 22.2 33 0.0011 21.8 1.2 29 20-48 116-144 (208)
60 1wv9_A Rhodanese homolog TT165 21.8 79 0.0027 16.9 2.7 21 28-48 71-91 (94)
61 3qye_A TBC1 domain family memb 21.7 48 0.0017 22.3 2.0 22 3-24 136-157 (331)
62 2wr1_A Hemagglutinin; glycopro 21.5 26 0.00088 26.6 0.6 12 39-50 349-360 (509)
63 2qfz_A TBC1 domain family memb 20.5 71 0.0024 21.6 2.7 27 2-28 133-159 (345)
No 1
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=99.72 E-value=2.5e-18 Score=123.01 Aligned_cols=53 Identities=36% Similarity=0.513 Sum_probs=50.7
Q ss_pred CCCccchHHHHHHHHHHHHcCCEEEEEeccccccccCCCceEEcCcccccccccC
Q psy5988 14 LLFAGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHK 68 (68)
Q Consensus 14 ~dapGmNaaIRavvr~a~~~G~eV~Gi~~Gy~GLi~~~~~i~~L~~~~V~~i~~~ 68 (68)
||||||||+||+++++++++|++||||++||+||+++ ++++|+|++|++|+++
T Consensus 12 GdapGmNaair~vv~~a~~~g~~v~Gi~~G~~GL~~~--~~~~l~~~~v~~i~~~ 64 (320)
T 1pfk_A 12 GDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYED--RMVQLDRYSVSDMINR 64 (320)
T ss_dssp SCCTTHHHHHHHHHHHHHHTTCEEEEESTHHHHHHTT--CEEEECSGGGTTCTTC
T ss_pred CCchhHHHHHHHHHHHHHHCCCEEEEEecChHHhcCC--CEEECCHHHHhhHHhC
Confidence 5999999999999999999999999999999999998 9999999999999864
No 2
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=99.72 E-value=2.3e-18 Score=123.18 Aligned_cols=53 Identities=40% Similarity=0.534 Sum_probs=50.7
Q ss_pred CCCccchHHHHHHHHHHHHcCCEEEEEeccccccccCCCceEEcCcccccccccC
Q psy5988 14 LLFAGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHK 68 (68)
Q Consensus 14 ~dapGmNaaIRavvr~a~~~G~eV~Gi~~Gy~GLi~~~~~i~~L~~~~V~~i~~~ 68 (68)
||||||||+||+++++++++|++||||++||+||+++ ++++|+|++|++|+++
T Consensus 11 GdapGmNaair~vv~~a~~~g~~v~Gi~~G~~GL~~~--~~~~l~~~~v~~i~~~ 63 (319)
T 1zxx_A 11 GDAPGMNAAVRAVTRVAIANGLEVFGIRYGFAGLVAG--DIFPLESEDVAHLINV 63 (319)
T ss_dssp SCCTTHHHHHHHHHHHHHTTTCEEEEECTHHHHHHHT--CEEECCGGGGTTCTTC
T ss_pred CCchhHHHHHHHHHHHHHHCCCEEEEEccChHHHcCC--CEEECCHHHHHhHHhC
Confidence 6999999999999999999999999999999999999 9999999999999864
No 3
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=99.69 E-value=1.7e-17 Score=118.35 Aligned_cols=53 Identities=45% Similarity=0.655 Sum_probs=50.7
Q ss_pred CCCccchHHHHHHHHHHHHcCCEEEEEeccccccccCCCceEEcCcccccccccC
Q psy5988 14 LLFAGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHK 68 (68)
Q Consensus 14 ~dapGmNaaIRavvr~a~~~G~eV~Gi~~Gy~GLi~~~~~i~~L~~~~V~~i~~~ 68 (68)
||||||||+||+++++++++|++|||+++||+||+++ ++.+|+|++|++|+++
T Consensus 11 G~~pG~Na~ir~vv~~a~~~g~~v~Gi~~G~~Gl~~~--~~~~l~~~~v~~i~~~ 63 (319)
T 4a3s_A 11 GDSPGMNAAVRAVVRKAIYHDVEVYGIYNGYAGLISG--KIEKLELGSVGDIIHR 63 (319)
T ss_dssp SCCTTHHHHHHHHHHHHHHTTCEEEEECSTTHHHHHC--CEEEECGGGGTTCTTC
T ss_pred CCcHHHHHHHHHHHHHHHHCCCEEEEEecchHHHcCC--CeecCCHHHHHhHHhc
Confidence 6999999999999999999999999999999999998 9999999999999764
No 4
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=99.66 E-value=5.6e-17 Score=126.62 Aligned_cols=60 Identities=42% Similarity=0.734 Sum_probs=54.2
Q ss_pred cCCCC----CCCccchHHHHHHHHHHHHcCCEEEEEeccccccccCCCceEEcCcccccccccC
Q psy5988 9 LPINL----LLFAGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHK 68 (68)
Q Consensus 9 ~~~~~----~dapGmNaaIRavvr~a~~~G~eV~Gi~~Gy~GLi~~~~~i~~L~~~~V~~i~~~ 68 (68)
++|++ ||||||||+||++|++++++|++||||++||+||+++++++.+|+|++|++|+++
T Consensus 6 krIgIltsGGdaPGmNaaIravvr~a~~~g~~V~Gi~~G~~GL~~~~~~i~~l~~~~V~~i~~~ 69 (787)
T 3o8o_A 6 KKIAVMTSGGDSPGMNAAVRAVVRTGIHFGCDVFAVYEGYEGLLRGGKYLKKMAWEDVRGWLSE 69 (787)
T ss_dssp CEEEEEEESSCCTTHHHHHHHHHHHHHHTTCEEEEETTHHHHHHHCTTSEEECCGGGGTTGGGC
T ss_pred cEEEEEeeCCCchhHHHHHHHHHHHHHHCCCEEEEEecChHHhcCCCCCeEECCHHHHhhHHhC
Confidence 45555 6999999999999999999999999999999999998556999999999999864
No 5
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=99.65 E-value=7.1e-17 Score=125.66 Aligned_cols=59 Identities=37% Similarity=0.649 Sum_probs=54.2
Q ss_pred hcCCCC----CCCccchHHHHHHHHHHHHcCCEEEEEeccccccccCCCceEEcCcccccccccC
Q psy5988 8 LLPINL----LLFAGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHK 68 (68)
Q Consensus 8 ~~~~~~----~dapGmNaaIRavvr~a~~~G~eV~Gi~~Gy~GLi~~~~~i~~L~~~~V~~i~~~ 68 (68)
.++|++ ||||||||+||++|++++++|++||||++||+||+++ ++.+|+|++|++|+++
T Consensus 400 ~~~IgIltsGGdapGmNaaIravv~~~~~~g~~v~Gi~~G~~GL~~~--~~~~l~~~~v~~i~~~ 462 (762)
T 3o8l_A 400 SYTVAVMNVGAPAAGMNAAVRSTVRIGLIQGNRVLVVHDGFEGPAKG--QIEEAGWSYVGGWTGQ 462 (762)
T ss_dssp CCEEEEEEESSCCTTHHHHHHHHHHHHHHHTCEEEEESSTTHHHHHT--CEEECCTTTTSSCTTC
T ss_pred CCEEEEEecCCCcHHHHHHHHHHHHHHHHCCCEEEEEeccccccccC--CEEECCHHHhhhHHhC
Confidence 356666 5999999999999999999999999999999999999 9999999999999764
No 6
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=99.64 E-value=9.9e-17 Score=127.39 Aligned_cols=60 Identities=45% Similarity=0.780 Sum_probs=54.2
Q ss_pred cCCCC----CCCccchHHHHHHHHHHHHcCCEEEEEeccccccccCCCceEEcCcccccccccC
Q psy5988 9 LPINL----LLFAGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHK 68 (68)
Q Consensus 9 ~~~~~----~dapGmNaaIRavvr~a~~~G~eV~Gi~~Gy~GLi~~~~~i~~L~~~~V~~i~~~ 68 (68)
++|++ ||||||||+||++|++++++|++||||++||+||+++++++.+|+|++|++|+++
T Consensus 211 krIaIlTSGGdaPGmNAaIRaVVr~a~~~G~~V~Gi~~Gy~GLl~g~~~i~~L~~~~V~~i~~~ 274 (989)
T 3opy_A 211 KKIAIITSGGDAPGMNAAVRAVTRAGIFYGCKVYACYEGYTGLVKGGDMLKELQWQDVRGLLSI 274 (989)
T ss_dssp EEEEEEECSSCCTTHHHHHHHHHHHHHHTTEEEEEECTHHHHHHSCSTTEEEECTTTTTTGGGC
T ss_pred CEEEEEeeCCCchhHHHHHHHHHHHHHHCCCEEEEEecChHHhcCCCCCeEECCHHHHhhHHhC
Confidence 45665 5999999999999999999999999999999999998556999999999999864
No 7
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=99.64 E-value=4.8e-17 Score=126.62 Aligned_cols=60 Identities=57% Similarity=0.937 Sum_probs=54.3
Q ss_pred cCCCC----CCCccchHHHHHHHHHHHHcCCEEEEEeccccccccCCCceEEcCcccccccccC
Q psy5988 9 LPINL----LLFAGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHK 68 (68)
Q Consensus 9 ~~~~~----~dapGmNaaIRavvr~a~~~G~eV~Gi~~Gy~GLi~~~~~i~~L~~~~V~~i~~~ 68 (68)
.+|++ ||||||||+||++||+++++|++||||++||+||+++++++++|+|++|++|+++
T Consensus 16 krIaIltsGGdaPGmNaaIravvr~a~~~g~~V~Gi~~G~~GL~~~~~~~~~l~~~~v~~i~~~ 79 (762)
T 3o8l_A 16 KAIAVLTSGGDAQGMNAAVRAVVRVGIFTGARVFFVHEGYQGLVDGGDHIREATWESVSMMLQL 79 (762)
T ss_dssp CEEEEECCSSCCTTHHHHHHHHHHHHHHTTCEEECCSTHHHHHHSCGGGCCBCCSGGGTTCTTC
T ss_pred cEEEEEccCCCchhHhHHHHHHHHHHHHCCCEEEEEecChhhhhcCCCcEEECCHHHHHhHHhC
Confidence 35555 5999999999999999999999999999999999998667999999999999764
No 8
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.3e-16 Score=124.28 Aligned_cols=60 Identities=40% Similarity=0.716 Sum_probs=53.1
Q ss_pred cCCCC----CCCccchHHHHHHHHHHHHcCCEEEEEeccccccccCC-CceEEcCcccccccccC
Q psy5988 9 LPINL----LLFAGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGG-DNIVEANWSSVSSIIHK 68 (68)
Q Consensus 9 ~~~~~----~dapGmNaaIRavvr~a~~~G~eV~Gi~~Gy~GLi~~~-~~i~~L~~~~V~~i~~~ 68 (68)
++|++ ||||||||+||++|++++++|++||||++||+||+++. +.+.+|+|++|++|+++
T Consensus 4 krIgIltsGGdapGmNaaIravvr~a~~~g~~V~Gi~~G~~GL~~~~~~~i~~l~~~~V~~i~~~ 68 (766)
T 3o8o_B 4 KAIAVMTSGGDAPGMNSNVRAIVRSAIFKGCRAFVVMEGYEGLVRGGPEYIKEFHWEDVRGWSAE 68 (766)
T ss_dssp CEEEEEEESSCCTTHHHHHHHHHHHHHHHTCEEEEETTHHHHHHSCSTTTEEEECGGGGTTGGGC
T ss_pred cEEEEEeeCCCchhHHHHHHHHHHHHHHCCCEEEEEeCChHHHhcCCcccEEECCHHHHhhHHhC
Confidence 34555 69999999999999999999999999999999999983 33899999999999864
No 9
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.7e-16 Score=123.66 Aligned_cols=58 Identities=21% Similarity=0.397 Sum_probs=53.0
Q ss_pred cCCCC----CCCccchHHHHHHHHHHHHcCCEEEEEecccccccc-CCCceEEcCcccccccccC
Q psy5988 9 LPINL----LLFAGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVD-GGDNIVEANWSSVSSIIHK 68 (68)
Q Consensus 9 ~~~~~----~dapGmNaaIRavvr~a~~~G~eV~Gi~~Gy~GLi~-~~~~i~~L~~~~V~~i~~~ 68 (68)
++|++ ||||||||+||++|++|+++|++||||++||+||++ + ++.+|+|++|++|+++
T Consensus 394 ~~IgIltsGGdapGmNaaIravv~~a~~~g~~v~Gi~~G~~GL~~~~--~~~~l~~~~v~~i~~~ 456 (766)
T 3o8o_B 394 LKIAIVNVGAPAGGINSAVYSMATYCMSQGHRPYAIYNGWSGLARHE--SVRSLNWKDMLGWQSR 456 (766)
T ss_dssp CEEEEEEESSCCTTHHHHHHHHHHHHHHHTCEEEEETTHHHHHHHHC--CEEECCGGGGTTGGGC
T ss_pred cEEEEEecCCCcHHHHHHHHHHHHHHHHCCCEEEEEecChHhhCCCC--ceEECCHHHHhhHhhC
Confidence 46666 599999999999999999999999999999999997 5 7999999999999864
No 10
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=99.63 E-value=1.7e-16 Score=124.00 Aligned_cols=58 Identities=29% Similarity=0.476 Sum_probs=53.4
Q ss_pred cCCCC----CCCccchHHHHHHHHHHHHcCCEEEEEeccccccc-cCCCceEEcCcccccccccC
Q psy5988 9 LPINL----LLFAGMNAAVRACVRMGIYLGCKVFFIKEGYQGMV-DGGDNIVEANWSSVSSIIHK 68 (68)
Q Consensus 9 ~~~~~----~dapGmNaaIRavvr~a~~~G~eV~Gi~~Gy~GLi-~~~~~i~~L~~~~V~~i~~~ 68 (68)
++|++ ||||||||+||++|++|+++|++||||++||+||+ ++ ++++|+|++|++|+++
T Consensus 394 ~~IgIltsGGdapGmNaaIravv~~a~~~g~~v~Gi~~G~~GL~~~~--~~~~L~~~~v~~i~~~ 456 (787)
T 3o8o_A 394 LNIGIVHVGAPSAALNAATRAATLYCLSHGHKPYAIMNGFSGLIQTG--EVKELSWIDVENWHNL 456 (787)
T ss_dssp CEEEEEEESSCCSSHHHHHHHHHHHHHHHTCEEEEETTHHHHHHHHC--CEEECCTTTTTTGGGC
T ss_pred cEEEEEccCCCCHHHHHHHHHHHHHHHHCCCEEEEEccChhhhCCCC--CEEECCHHHHhhhhcC
Confidence 55666 59999999999999999999999999999999999 67 8999999999999864
No 11
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=99.62 E-value=2e-16 Score=125.30 Aligned_cols=59 Identities=20% Similarity=0.320 Sum_probs=53.8
Q ss_pred hcCCCC----CCCccchHHHHHHHHHHHHcCCEEEEEeccccccc-cCCCceEEcCcccccccccC
Q psy5988 8 LLPINL----LLFAGMNAAVRACVRMGIYLGCKVFFIKEGYQGMV-DGGDNIVEANWSSVSSIIHK 68 (68)
Q Consensus 8 ~~~~~~----~dapGmNaaIRavvr~a~~~G~eV~Gi~~Gy~GLi-~~~~~i~~L~~~~V~~i~~~ 68 (68)
.++|++ ||||||||+||++|++|+++|++||||++||+||+ ++ ++++|+|++|++|+++
T Consensus 571 ~~rIgIltsGGdapGmNaaIravv~~a~~~g~~V~Gi~~G~~GL~~~~--~~~~L~~~~V~~i~~~ 634 (941)
T 3opy_B 571 RKKIAIINVGAPAGGMNSAVYSMATYCMSRGHVPYAIHNGFSGLARHE--SVRSINWLDIEGWGSL 634 (941)
T ss_dssp CCEEEEEEESSCCTTHHHHHHHHHHHHHHHTCEEEEETTHHHHHHHHC--CEEECCTTTTTTGGGC
T ss_pred CcEEEEEecCCCcHHHHHHHHHHHHHHHHCCCEEEEEccchHhhCcCC--cEEECCHHHHhChhhC
Confidence 356666 59999999999999999999999999999999999 67 8999999999999864
No 12
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=99.61 E-value=2.1e-16 Score=125.16 Aligned_cols=60 Identities=48% Similarity=0.809 Sum_probs=53.6
Q ss_pred cCCCC----CCCccchHHHHHHHHHHHHcCCEEEEEeccccccccCC-CceEEcCcccccccccC
Q psy5988 9 LPINL----LLFAGMNAAVRACVRMGIYLGCKVFFIKEGYQGMVDGG-DNIVEANWSSVSSIIHK 68 (68)
Q Consensus 9 ~~~~~----~dapGmNaaIRavvr~a~~~G~eV~Gi~~Gy~GLi~~~-~~i~~L~~~~V~~i~~~ 68 (68)
++|++ ||||||||+||++|++++++|++||||++||+||+++. +.+.+|+|++|++|+++
T Consensus 182 krIgIlTsGGdaPGmNAaIRaVVr~a~~~g~~V~Gi~~Gy~GLl~g~~~~i~~l~~~~V~~i~~~ 246 (941)
T 3opy_B 182 KTIGVMTSGGDSPGMNPFVRAVVRAGIYKGCKVFCIHEGYEGLVRGGEKYIKETQWHDVRGWLVE 246 (941)
T ss_dssp CCEEEEECSSCCTTHHHHHHHHHHHHHHTTCCEEEETTHHHHHHHCSTTTEEEECGGGGTTTTTC
T ss_pred CEEEEEeeCcCchhHHHHHHHHHHHHHHCCCEEEEEeCChHHhccCCcceEEECCHHHHHhHHhC
Confidence 45666 59999999999999999999999999999999999983 33899999999999864
No 13
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=99.60 E-value=4.1e-16 Score=123.87 Aligned_cols=59 Identities=27% Similarity=0.500 Sum_probs=54.2
Q ss_pred hcCCCC----CCCccchHHHHHHHHHHHHcCCEEEEEeccccccc-cCCCceEEcCcccccccccC
Q psy5988 8 LLPINL----LLFAGMNAAVRACVRMGIYLGCKVFFIKEGYQGMV-DGGDNIVEANWSSVSSIIHK 68 (68)
Q Consensus 8 ~~~~~~----~dapGmNaaIRavvr~a~~~G~eV~Gi~~Gy~GLi-~~~~~i~~L~~~~V~~i~~~ 68 (68)
.++|++ ||||||||+||++|++|+++|++||||++||+||+ ++ ++.+|+|++|++|+++
T Consensus 598 ~~rIgIltsGGdaPGmNAaIravV~~a~~~g~~V~Gi~~G~~GLl~~~--~~~~L~~~~V~~i~~~ 661 (989)
T 3opy_A 598 RLNIAIIHVGAPTSALNPATRVATLNSLAKGHRVFAIRNGFAGLIRHG--AVRELNWIDVEDWHNT 661 (989)
T ss_dssp CCEEEEEEESSCCTTHHHHHHHHHHHHHHTTCEEEEETTHHHHHHHHC--CEEEECTTTTTTTTTC
T ss_pred CceEEEEecCCCCHHHHHHHHHHHHHHHHCCCEEEEEccChhhhcCCC--cEEECCHHHhhCHhhC
Confidence 466776 59999999999999999999999999999999999 87 8999999999999764
No 14
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=99.58 E-value=8e-16 Score=115.18 Aligned_cols=55 Identities=24% Similarity=0.392 Sum_probs=48.7
Q ss_pred CCCccchHHHHHHHHHHHH-cCC-EEEEEeccccccccC-CCceEEcCcccccccccC
Q psy5988 14 LLFAGMNAAVRACVRMGIY-LGC-KVFFIKEGYQGMVDG-GDNIVEANWSSVSSIIHK 68 (68)
Q Consensus 14 ~dapGmNaaIRavvr~a~~-~G~-eV~Gi~~Gy~GLi~~-~~~i~~L~~~~V~~i~~~ 68 (68)
||||||||+||++|+++++ +|+ +||||++||+||+++ ..++++|+|++|++|+++
T Consensus 107 GdaPGmNaaIravv~~a~~~~g~~~V~Gi~~G~~GLl~~~~~~~~~L~~~~V~~i~~~ 164 (487)
T 2hig_A 107 GICPGLNDVIRSITLTGINVYNVKRVIGFRFGYWGLSKKGSQTAIELHRGRVTNIHHY 164 (487)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHCCSEEEECSTGGGGGSHHHHTTCEEECHHHHTTGGGS
T ss_pred CCcchhhHHHHHHHHHHHHhCCCcEEEEEccCHHHhhhccCCCEEECCHHHHHHHHhC
Confidence 5999999999999999985 787 999999999999751 228999999999999864
No 15
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=99.55 E-value=1.5e-15 Score=111.72 Aligned_cols=52 Identities=12% Similarity=0.215 Sum_probs=47.0
Q ss_pred CCCccchHHHHHHHHHHHHcCC---EEEEEeccccccccCCCceEEcCcc---ccccccc
Q psy5988 14 LLFAGMNAAVRACVRMGIYLGC---KVFFIKEGYQGMVDGGDNIVEANWS---SVSSIIH 67 (68)
Q Consensus 14 ~dapGmNaaIRavvr~a~~~G~---eV~Gi~~Gy~GLi~~~~~i~~L~~~---~V~~i~~ 67 (68)
||||||||+||++|++|.++|+ +||||++||+||+++ ++.+|+.. ++++|++
T Consensus 13 GdapGmNa~Ir~vv~~a~~~g~~~~~V~Gi~~G~~GLl~~--~~~~l~~~~~~~v~~i~~ 70 (419)
T 3hno_A 13 GVTAVINASAAGVIEAARKQSGKIGRIYAGRNGIIGALTE--DLIDTGQESDAAISALRY 70 (419)
T ss_dssp SCCSSHHHHHHHHHHHHHHHCSSCCCEEEETTTHHHHHTT--CEEEGGGSCHHHHHHGGG
T ss_pred CChHHHHHHHHHHHHHHHHcCCCCcEEEEEeCChHHhCCC--CcccCccccHHHHHHHHc
Confidence 6999999999999999999999 999999999999999 89888554 7777765
No 16
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=99.55 E-value=1.2e-15 Score=115.49 Aligned_cols=58 Identities=19% Similarity=0.198 Sum_probs=51.4
Q ss_pred cCCCC----CCCccchHHHHHHHHHH--HHcCCEEEEEeccccccccCCCceEEcCcccccccccC
Q psy5988 9 LPINL----LLFAGMNAAVRACVRMG--IYLGCKVFFIKEGYQGMVDGGDNIVEANWSSVSSIIHK 68 (68)
Q Consensus 9 ~~~~~----~dapGmNaaIRavvr~a--~~~G~eV~Gi~~Gy~GLi~~~~~i~~L~~~~V~~i~~~ 68 (68)
++|++ |||||||++||++++++ .+.|++||||++||+||+++ ++++|+|++|++|+++
T Consensus 73 ~~igIltsGGdaPGmNa~Ir~vv~~~~~~~~~~~v~Gi~~G~~GL~~~--~~~~L~~~~v~~i~~~ 136 (555)
T 2f48_A 73 LNIGIILSGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLEN--DKIELTESLINSYRNT 136 (555)
T ss_dssp CEEEEEEBSSCCTTHHHHHHHHHHHHHHHCTTCEEEEETTTTHHHHTT--CEEEECHHHHHHHTTC
T ss_pred cEEEEECcCCCcHhHHHHHHHHHHHHHHhcCCCEEEEEecChHHhcCC--CEEECCHHHHHHHHhC
Confidence 45554 59999999999999994 56789999999999999998 9999999999998763
No 17
>2ciw_A Chloroperoxidase; oxidoreductase, heme, iron, chloride, manganese, pyrrolidone carboxylic acid, glycoprotein, metal-binding; HET: NAG BMA MAN HEM; 1.15A {Caldariomyces fumago} SCOP: a.39.3.1 a.39.3.1 PDB: 1cpo_A* 2civ_A* 2cix_A* 2ciy_A* 2ciz_A* 2cj0_A* 2cj1_A* 2cj2_A* 2cpo_A* 2j18_A* 2j19_A* 2j5m_A*
Probab=62.28 E-value=1.8 Score=30.65 Aligned_cols=9 Identities=22% Similarity=0.161 Sum_probs=7.6
Q ss_pred CCCccchHH
Q psy5988 14 LLFAGMNAA 22 (68)
Q Consensus 14 ~dapGmNaa 22 (68)
++|||||+.
T Consensus 28 gPCPgLNaL 36 (299)
T 2ciw_A 28 APCPALNAL 36 (299)
T ss_dssp CSCHHHHHH
T ss_pred CCCHHHHHH
Confidence 589999985
No 18
>2lq1_A De novo designed antifreeze peptide 3; AFP, antifreeze protein; NMR {Synthetic}
Probab=49.96 E-value=2.9 Score=19.31 Aligned_cols=18 Identities=22% Similarity=0.311 Sum_probs=14.5
Q ss_pred CCCCCccchHHHHHHHHH
Q psy5988 12 NLLLFAGMNAAVRACVRM 29 (68)
Q Consensus 12 ~~~dapGmNaaIRavvr~ 29 (68)
|++.+||+..+.-+++..
T Consensus 3 nvglspglstaltgftlv 20 (26)
T 2lq1_A 3 NVGLSPGLSTALTGFTLV 20 (26)
T ss_dssp TTSSHHHHHHHHHHTTHH
T ss_pred ccccCccceehccccEEE
Confidence 689999999988776543
No 19
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=41.29 E-value=23 Score=21.84 Aligned_cols=29 Identities=21% Similarity=0.431 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-|+.+-++.|...|++|+-+.|+-.+.-
T Consensus 131 ~~CV~~Ta~da~~~Gy~v~vv~Da~~~~~ 159 (180)
T 1im5_A 131 EYCVRATALDALKHGFEVYLLRDAVKGIK 159 (180)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECSC
T ss_pred CHHHHHHHHHHHHCCCEEEEehhhccCCC
Confidence 56899999999999999999998866543
No 20
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=41.12 E-value=23 Score=22.16 Aligned_cols=29 Identities=17% Similarity=0.256 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-|+.+-++.|...|++|+-+.|+-.+.-
T Consensus 143 ~~CV~~Ta~da~~~Gy~v~vv~Da~as~~ 171 (199)
T 1j2r_A 143 NIGVESTARNAWELGFNLVIAEDACSAAS 171 (199)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEEBSS
T ss_pred cHHHHHHHHHHHHCCCEEEEehhhcCCCC
Confidence 56899999999999999999998866653
No 21
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=40.84 E-value=16 Score=24.95 Aligned_cols=34 Identities=32% Similarity=0.291 Sum_probs=25.8
Q ss_pred hhcCCCCC---CCccchHHHHHHHHHHH-HcCCEEEEE
Q psy5988 7 NLLPINLL---LFAGMNAAVRACVRMGI-YLGCKVFFI 40 (68)
Q Consensus 7 ~~~~~~~~---dapGmNaaIRavvr~a~-~~G~eV~Gi 40 (68)
.-|.|.+. ++.|.|+.++..++.-+ ..|++|.=+
T Consensus 18 ~~mkiali~~~sqa~kN~~lKe~i~~~L~~~G~eV~D~ 55 (231)
T 3c5y_A 18 QGMKIALIIENSQAAKNAVVHEALTTVAEPLGHKVFNY 55 (231)
T ss_dssp -CCEEEECCCGGGGGGHHHHHHHHHHHHGGGTCEEEEC
T ss_pred hcceEEEEecCCHhhhHHHHHHHHHHHHHHCCCEEEEe
Confidence 34566555 88999999999888776 799999543
No 22
>1x9g_A Putative MAR1; structural genomics, protein structure initiative, SGPP, PSI structural genomics of pathogenic protozoa consortium; 2.41A {Leishmania donovani} SCOP: c.33.1.3 PDB: 1xn4_A
Probab=40.49 E-value=25 Score=22.50 Aligned_cols=29 Identities=21% Similarity=0.252 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-||.+-++.|...|++|+-+.|+-.+.-
T Consensus 118 ~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~ 146 (200)
T 1x9g_A 118 HACILQTVADLLDMNKRVFLPKDGLGSQK 146 (200)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEGGGEECSS
T ss_pred CcHHHHHHHHHHhCCCEEEEeCCCcCCCC
Confidence 56899999999999999999999876643
No 23
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=39.71 E-value=23 Score=22.13 Aligned_cols=29 Identities=17% Similarity=0.201 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-|+.+-++.|.+.|++|+-+.|+-.+.-
T Consensus 124 ~~CV~~Ta~da~~~Gy~v~vv~Da~~s~~ 152 (190)
T 3lqy_A 124 HMAIDAVTRAAEDLGYECAVAHDACATLD 152 (190)
T ss_dssp TTHHHHHHHHHHHHTCEEEEEEEEEEBCC
T ss_pred ChHHHHHHHHHHHCCCEEEEechhhccCC
Confidence 55899999999999999999998866653
No 24
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=39.38 E-value=25 Score=21.76 Aligned_cols=27 Identities=11% Similarity=0.342 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQG 46 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~G 46 (68)
|-||++-++.|...|++|+-+.|+-.+
T Consensus 121 ~~CV~~Ta~da~~~Gy~V~vv~Da~as 147 (182)
T 3eef_A 121 DICVRHTAADALYRNYRIIVVEDAVAA 147 (182)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHCCCEEEEehhhcCC
Confidence 568999999999999999999998777
No 25
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=38.87 E-value=25 Score=22.31 Aligned_cols=28 Identities=21% Similarity=0.271 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHHcCCEEEEEecccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGM 47 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GL 47 (68)
|-||++-++.|...|++|+-+.|+-.+.
T Consensus 131 ~~CV~~Ta~dA~~~Gy~V~vv~Da~as~ 158 (204)
T 3hb7_A 131 NVCVRSTATDALANAYKVITLSDGTASK 158 (204)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECS
T ss_pred cHHHHHHHHHHHHCCCEEEEechhccCC
Confidence 5589999999999999999999876554
No 26
>1nf9_A Phenazine biosynthesis protein PHZD; isochorismatase, enzyme, phenazine pathway, hydrolase; HET: BOG; 1.50A {Pseudomonas aeruginosa} SCOP: c.33.1.3 PDB: 1nf8_A* 3r77_A*
Probab=37.96 E-value=27 Score=22.04 Aligned_cols=28 Identities=7% Similarity=0.081 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHHcCCEEEEEecccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGM 47 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GL 47 (68)
|-|+.+-++.|...|++|+-+.|+-.+.
T Consensus 153 ~~CV~~Ta~dA~~~Gy~V~vv~Da~as~ 180 (207)
T 1nf9_A 153 HVGVLISTVDAYSNDIQPFLVADAIADF 180 (207)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECS
T ss_pred ChHHHHHHHHHHHCCCEEEEeCcccCCC
Confidence 4588999999999999999999886654
No 27
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=37.81 E-value=27 Score=22.13 Aligned_cols=28 Identities=11% Similarity=0.170 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHcCCEEEEEecccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGM 47 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GL 47 (68)
|-||.+-++.|...|++|+-+.|+-.+.
T Consensus 137 ~~CV~~Ta~da~~~Gy~V~vv~Da~as~ 164 (204)
T 3hu5_A 137 PNCIRGTAVDAFALDYDVVVVTDACSAR 164 (204)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECS
T ss_pred chHHHHHHHHHHHCCCEEEEehhhhCCC
Confidence 5589999999999999999999886654
No 28
>2b34_A F35G2.2, MAR1 ribonuclease; isochorismatase family, structural genomics, PSI, protein structure initiative; 2.14A {Caenorhabditis elegans}
Probab=37.58 E-value=27 Score=22.15 Aligned_cols=29 Identities=10% Similarity=0.022 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-|+.+-++.|...|++|+-+.|+-.+.-
T Consensus 112 ~~CV~~Ta~da~~~Gy~V~vv~Da~as~~ 140 (199)
T 2b34_A 112 HVCVLQTTYDLLERGLNVHVVVDAVSSRS 140 (199)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECSS
T ss_pred CHHHHHHHHHHHHCCCEEEEeCcccCCCC
Confidence 56899999999999999999998876653
No 29
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=36.94 E-value=29 Score=22.04 Aligned_cols=28 Identities=14% Similarity=0.239 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHcCCEEEEEecccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGM 47 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GL 47 (68)
|-|+.+-++.|.+.|++|+-+.|+-...
T Consensus 134 ~~CV~~Ta~da~~~Gy~V~vv~Da~as~ 161 (197)
T 4h17_A 134 HSSVSTTVRRAKDYGYRCTLVEDASATR 161 (197)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHCCCEEEEeCcccccc
Confidence 5589999999999999999999876554
No 30
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=36.82 E-value=29 Score=21.94 Aligned_cols=28 Identities=32% Similarity=0.424 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHcCCEEEEEecccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGM 47 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GL 47 (68)
|-||.+-++.|...|++|+-+.|+-...
T Consensus 124 ~~CV~~Ta~da~~~Gy~v~vv~Da~~s~ 151 (198)
T 3mcw_A 124 SNSVEATVRMAGNLGFAVCLAEDGCFTF 151 (198)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECB
T ss_pred ChHHHHHHHHHHHCCCEEEEeCcccccc
Confidence 4589999999999999999999887664
No 31
>2a67_A Isochorismatase family protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.00A {Enterococcus faecalis}
Probab=36.53 E-value=26 Score=21.46 Aligned_cols=29 Identities=17% Similarity=0.214 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-|+.+-++.|...|++|+-+.|+-...-
T Consensus 112 ~~CV~~Ta~da~~~Gy~v~v~~Da~~s~~ 140 (167)
T 2a67_A 112 EFCVDTTIRMAHGLGYTCLMTPKTTSTLD 140 (167)
T ss_dssp TTHHHHHHHHHHHHTCEEEECTTCEECCC
T ss_pred ChHHHHHHHHHHHCCCEEEEechhhcCCC
Confidence 56889999999999999999998876653
No 32
>3oqp_A Putative isochorismatase; catalytic triad, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.22A {Burkholderia xenovorans}
Probab=36.02 E-value=30 Score=22.33 Aligned_cols=28 Identities=11% Similarity=0.202 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHcCCEEEEEecccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGM 47 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GL 47 (68)
|-||.+-++.|...|++|+-+.|+-...
T Consensus 120 ~~CV~~Ta~dA~~~Gy~V~vv~Da~as~ 147 (211)
T 3oqp_A 120 HNCDASTINHAVHSGLAVEFLHDATGSV 147 (211)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEEBC
T ss_pred CHHHHHHHHHHHHCCCeEEEechheecc
Confidence 5589999999999999999999876654
No 33
>3irv_A Cysteine hydrolase; structural genomics, PSI-2, protein structure initiative, CY hydrolase; 1.60A {Pseudomonas syringae PV}
Probab=35.51 E-value=30 Score=22.51 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHcCCEEEEEecccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGM 47 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GL 47 (68)
|-||.+-++.|...|++|+-+.|.-...
T Consensus 150 ~~CV~~Ta~dA~~~Gy~V~vv~Da~as~ 177 (233)
T 3irv_A 150 NVCCETTIRDGVHREYKVIALSDANAAM 177 (233)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECC
T ss_pred cHHHHHHHHHHHHCCCEEEEechhhccC
Confidence 4589999999999999999999886664
No 34
>1yzv_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.00A {Trypanosoma cruzi}
Probab=34.71 E-value=32 Score=22.04 Aligned_cols=29 Identities=10% Similarity=0.079 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-|+.+-++.|...|++|+-+.|+-.+.-
T Consensus 121 ~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~ 149 (204)
T 1yzv_A 121 HVCILQTAAALLDMKKKVVIAVDGCGSQS 149 (204)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECSS
T ss_pred CHHHHHHHHHHHHCCCEEEEECCccCCCC
Confidence 56899999999999999999998876543
No 35
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=34.37 E-value=33 Score=22.24 Aligned_cols=28 Identities=21% Similarity=0.344 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHHcCCEEEEEecccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGM 47 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GL 47 (68)
|-|+.+-++.|...|++|+-+.|+-.+.
T Consensus 162 ~~CV~~Ta~da~~~Gy~v~vv~Da~~s~ 189 (226)
T 3kl2_A 162 NCCVESTMRTGYERGFRVITLTDCVAAT 189 (226)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECS
T ss_pred chHHHHHHHHHHHCCCEEEEechhhcCC
Confidence 5689999999999999999999876654
No 36
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=33.31 E-value=36 Score=21.52 Aligned_cols=29 Identities=14% Similarity=0.134 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-||.+-++.|...|++|+-+.|+-.+.-
T Consensus 137 ~~CV~~Ta~~a~~~G~~v~v~~Da~~~~~ 165 (199)
T 3txy_A 137 NIGVESTAREAYENNYNVVVVSDAVSTWS 165 (199)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEEBSC
T ss_pred CHHHHHHHHHHHHCCCEEEEecHhhcCCC
Confidence 45899999999999999999998766543
No 37
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=32.75 E-value=36 Score=22.17 Aligned_cols=28 Identities=11% Similarity=0.228 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHHcCCEEEEEecccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGM 47 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GL 47 (68)
|-||.+-++.|...|++|+-+.|+-...
T Consensus 149 ~~CV~~Ta~da~~~Gy~v~vv~Da~as~ 176 (223)
T 3tg2_A 149 HIGILSTALDAFMFDIQPFVIGDGVADF 176 (223)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECS
T ss_pred ChHHHHHHHHHHHCCCEEEEeCcccCCC
Confidence 5689999999999999999999876554
No 38
>2kxa_A Haemagglutinin HA2 chain peptide; fusion peptide, viral protein, immune system; NMR {Influenza a virus}
Probab=32.28 E-value=1.7 Score=21.03 Aligned_cols=11 Identities=55% Similarity=1.223 Sum_probs=7.1
Q ss_pred EeccccccccC
Q psy5988 40 IKEGYQGMVDG 50 (68)
Q Consensus 40 i~~Gy~GLi~~ 50 (68)
|.+||+|++++
T Consensus 10 ieggW~gmi~g 20 (30)
T 2kxa_A 10 IEGGWTGMIDG 20 (30)
T ss_dssp HHHHHHHHHHH
T ss_pred hhcCccccccc
Confidence 45677777665
No 39
>2wt9_A Nicotinamidase; hydrolase, pyrazinamidase; HET: GOL; 1.65A {Acinetobacter baumannii} PDB: 2wta_A*
Probab=31.74 E-value=38 Score=21.95 Aligned_cols=29 Identities=17% Similarity=0.238 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-||++-++.|...|++|+-+.|+-.+.-
T Consensus 178 ~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~ 206 (235)
T 2wt9_A 178 DFCVAWTALDAVKQGFKTLVIEDACKGID 206 (235)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECCC
T ss_pred cHHHHHHHHHHHhCCCEEEEechhccCCC
Confidence 45899999999999999999999877654
No 40
>1nba_A N-carbamoylsarcosine amidohydrolase; hydrolase(IN linear amides); 2.00A {Arthrobacter SP} SCOP: c.33.1.3
Probab=30.50 E-value=41 Score=22.48 Aligned_cols=29 Identities=24% Similarity=0.231 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-||.+-++.|...|++|+-+.|+-.+.-
T Consensus 175 ~~CV~~Ta~dA~~~Gy~V~Vv~DA~as~~ 203 (264)
T 1nba_A 175 AGCVRHTVEDAIAKGFRPIIPRETIGDRV 203 (264)
T ss_dssp TTHHHHHHHHHHHHTCEEEEEGGGEECSS
T ss_pred CCHHHHHHHHHHHCCCEEEEeccccCCCC
Confidence 56899999999999999999999876543
No 41
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=29.74 E-value=45 Score=20.85 Aligned_cols=29 Identities=14% Similarity=0.137 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-|+++-++.|...|++|+-+.|+-.+.-
T Consensus 136 ~~CV~~Ta~da~~~G~~v~v~~Da~~~~~ 164 (186)
T 3gbc_A 136 DHCVRQTAEDAVRNGLATRVLVDLTAGVS 164 (186)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECSC
T ss_pred cHHHHHHHHHHHHCCCeEEEEhhhcCCCC
Confidence 45899999999999999999998866654
No 42
>3ku3_B Hemagglutinin HA2 chain; viral envelope protein, viral fusion protein, protein, viral protein; HET: NAG; 1.60A {Influenza a virus} PDB: 3ku5_B* 3ku6_B* 3qqb_B* 3qqe_B* 3qqo_B* 3s11_B* 3s12_B* 3s13_B* 1jsm_B* 1jsn_B* 1jso_B* 2fk0_B* 3fku_B* 4fqi_B* 3gbm_B* 2ibx_B* 1rd8_B* 3gbn_B* 3lzf_B* 3r2x_B* ...
Probab=29.42 E-value=16 Score=24.08 Aligned_cols=11 Identities=73% Similarity=1.313 Sum_probs=9.7
Q ss_pred EeccccccccC
Q psy5988 40 IKEGYQGMVDG 50 (68)
Q Consensus 40 i~~Gy~GLi~~ 50 (68)
|.+||+||+++
T Consensus 10 iEgGW~Gmi~G 20 (174)
T 3ku3_B 10 IEGGWQGMVDG 20 (174)
T ss_dssp BCSCBTTCCSC
T ss_pred HhcCchhhhhh
Confidence 67899999988
No 43
>3o94_A Nicotinamidase; hydrolase; 1.60A {Streptococcus pneumoniae} PDB: 3o90_A 3o91_A* 3o92_A* 3o93_A* 3s2s_A
Probab=29.17 E-value=45 Score=21.57 Aligned_cols=29 Identities=14% Similarity=0.135 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-||.+-++.|...|++|+-+.|.-.+.-
T Consensus 154 ~~CV~~Ta~~a~~~Gy~v~vv~Da~~~~~ 182 (211)
T 3o94_A 154 DISVLHTAIDAYNLGYDIEIVKPAVASIW 182 (211)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECSC
T ss_pred ChHHHHHHHHHHHCCCEEEEechhhcCCC
Confidence 56888999999999999999998766643
No 44
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=28.14 E-value=45 Score=21.91 Aligned_cols=28 Identities=18% Similarity=0.234 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHcCCEEEEEecccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGM 47 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GL 47 (68)
|-||.+-++.|...|++|+-+.|+-.+.
T Consensus 170 ~~CV~~Ta~da~~~Gy~V~vv~Da~as~ 197 (236)
T 3ot4_A 170 SGCVRASVVDAMSAGFRPLVLSDCVGDR 197 (236)
T ss_dssp TTHHHHHHHHHHHHTCEEEEEEEEECCS
T ss_pred cHHHHHHHHHHHHCCCEEEEechhcCCC
Confidence 5689999999999999999999886553
No 45
>3m5g_B Hemagglutinin; influenza virus, envelope protein, fusion Pro HOST cell membrane, HOST membrane, membrane, transmembrane, viral protein; HET: NAG; 2.60A {Influenza a virus} PDB: 3m5h_B* 3m5i_B* 3m5j_B* 4dj6_B* 4dj7_B* 4dj8_B* 4fqv_B 1ti8_B*
Probab=27.23 E-value=18 Score=23.95 Aligned_cols=11 Identities=36% Similarity=1.205 Sum_probs=9.7
Q ss_pred EeccccccccC
Q psy5988 40 IKEGYQGMVDG 50 (68)
Q Consensus 40 i~~Gy~GLi~~ 50 (68)
|.+||+||+++
T Consensus 10 iEgGw~Gmi~G 20 (182)
T 3m5g_B 10 IENGWEGLING 20 (182)
T ss_dssp BCCCBTTCCSC
T ss_pred HhcCchhhhhh
Confidence 67899999988
No 46
>4i78_C Hemagglutinin HA2; influenza VRUS, hemagglutinin homologue, viral protein, ectodomain; HET: NAG FUC; 3.18A {Influenza a virus}
Probab=26.18 E-value=16 Score=24.15 Aligned_cols=11 Identities=64% Similarity=1.304 Sum_probs=9.5
Q ss_pred EeccccccccC
Q psy5988 40 IKEGYQGMVDG 50 (68)
Q Consensus 40 i~~Gy~GLi~~ 50 (68)
|.+||+||+++
T Consensus 10 iEgGW~Gmi~G 20 (181)
T 4i78_C 10 IEGGWQGMIDG 20 (181)
T ss_dssp GGCCBTTCCSC
T ss_pred HhcCchhhhhh
Confidence 67899999988
No 47
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=26.16 E-value=53 Score=21.77 Aligned_cols=29 Identities=7% Similarity=0.125 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-|+.+-++.|...|++|+-+.|+-.+.-
T Consensus 156 ~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~ 184 (287)
T 2fq1_A 156 HIGCMTTATDAFMRDIKPFMVADALADFS 184 (287)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECSS
T ss_pred chHHHHHHHHHHHCCCEEEEechhccCCC
Confidence 44888999999999999999998876653
No 48
>2wrg_I Hemagglutinin HA2 chain; viral protein, envelope protein, glycoprotein, lipoprotein; HET: NAG SIA GAL; 3.00A {Influenza a virus} PDB: 2wrh_I*
Probab=25.99 E-value=19 Score=24.45 Aligned_cols=11 Identities=55% Similarity=1.223 Sum_probs=9.6
Q ss_pred EeccccccccC
Q psy5988 40 IKEGYQGMVDG 50 (68)
Q Consensus 40 i~~Gy~GLi~~ 50 (68)
|.+||+|+++|
T Consensus 10 iEgGW~GmidG 20 (222)
T 2wrg_I 10 IEGGWTGMIDG 20 (222)
T ss_dssp BCCCBSSCCSC
T ss_pred HhcCccchhcc
Confidence 67899999988
No 49
>1jsd_B Haemagglutinin (HA2 chain); viral protein; HET: NAG; 1.80A {Influenza a virus} SCOP: h.3.1.1 PDB: 1jsh_B* 1jsi_B*
Probab=25.87 E-value=20 Score=23.59 Aligned_cols=11 Identities=45% Similarity=1.029 Sum_probs=9.6
Q ss_pred EeccccccccC
Q psy5988 40 IKEGYQGMVDG 50 (68)
Q Consensus 40 i~~Gy~GLi~~ 50 (68)
|.+||.||+++
T Consensus 10 ieggw~gmi~g 20 (176)
T 1jsd_B 10 IEGGWPGLVAG 20 (176)
T ss_dssp BCCCBTTCCSC
T ss_pred HhcCcchhhcc
Confidence 67899999988
No 50
>1mqm_B Hemagglutinin HA2 chain; influenza virus, viral protein; HET: NAG BMA MAN SIA GAL; 2.60A {Influenza a virus} SCOP: h.3.1.1 PDB: 1mql_B* 1mqn_B* 2l4g_A
Probab=25.86 E-value=19 Score=24.40 Aligned_cols=11 Identities=55% Similarity=1.325 Sum_probs=9.7
Q ss_pred EeccccccccC
Q psy5988 40 IKEGYQGMVDG 50 (68)
Q Consensus 40 i~~Gy~GLi~~ 50 (68)
|.+||+||++|
T Consensus 10 iEgGW~GmidG 20 (221)
T 1mqm_B 10 IENGWEGMIDG 20 (221)
T ss_dssp BCCCBTTCCSC
T ss_pred HhcCcchhhcc
Confidence 67899999988
No 51
>2rft_B Influenza B hemagglutinin (HA); viral protein, receptor specificity, envelope Pro fusion protein, membrane, transmembrane, VIR glycoprotein; HET: NAG SIA BGC GAL NDG; 2.80A {Influenza b virus} SCOP: j.79.1.1 PDB: 2rfu_B* 3bt6_B*
Probab=25.39 E-value=19 Score=23.70 Aligned_cols=11 Identities=36% Similarity=1.087 Sum_probs=9.5
Q ss_pred EeccccccccC
Q psy5988 40 IKEGYQGMVDG 50 (68)
Q Consensus 40 i~~Gy~GLi~~ 50 (68)
|.+||+||++|
T Consensus 10 ieggw~gmi~g 20 (176)
T 2rft_B 10 LEGGWEGMIAG 20 (176)
T ss_dssp CCCBCTTCCSC
T ss_pred HhcCcchhhcc
Confidence 67899999987
No 52
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=25.17 E-value=58 Score=21.23 Aligned_cols=31 Identities=13% Similarity=0.026 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccccC
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMVDG 50 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi~~ 50 (68)
+-||++-++.|...|++|+-+.|+-.+.-..
T Consensus 168 ~~CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~ 198 (227)
T 3r2j_A 168 DFCVFFTAMDARKNGFSVVLLEDLTAAVDDA 198 (227)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEECCSCGG
T ss_pred chHHHHHHHHHHHCCCEEEEEhHhhCCCCHH
Confidence 4589999999999999999999987776543
No 53
>2qq8_A TBC1 domain family member 14; structural genomics consortium, RAB-GAP, SGC, GTPase activation, hydrolase activator; 2.00A {Homo sapiens}
Probab=24.98 E-value=37 Score=23.11 Aligned_cols=25 Identities=16% Similarity=0.119 Sum_probs=17.3
Q ss_pred hhhhhhhcCCCCCCCccchHHHHHH
Q psy5988 2 ILKVLNLLPINLLLFAGMNAAVRAC 26 (68)
Q Consensus 2 ~~~~~~~~~~~~~dapGmNaaIRav 26 (68)
||+.+....-.+|=|||||...--+
T Consensus 140 IL~aya~~~p~vgY~QGm~~iaa~l 164 (334)
T 2qq8_A 140 ILGAYTCYRPDVGYVQGMSFIAAVL 164 (334)
T ss_dssp HHHHHHHHCTTTCCCTTHHHHHHHH
T ss_pred HHHHHHHhCCCCCcchhHHHHHHHH
Confidence 3445555566889999999876443
No 54
>3hzj_A Rabgap1L, RAB GTPase-activating protein 1-like; structural genomics consortium, SGC, alternative splicing, GTPase activation, phosphoprotein; 2.30A {Homo sapiens}
Probab=24.50 E-value=54 Score=21.85 Aligned_cols=25 Identities=8% Similarity=0.050 Sum_probs=16.7
Q ss_pred hhhhhhcCCCCCCCccchHHHHHHH
Q psy5988 3 LKVLNLLPINLLLFAGMNAAVRACV 27 (68)
Q Consensus 3 ~~~~~~~~~~~~dapGmNaaIRavv 27 (68)
|+.+-...-.+|=|||||....-+.
T Consensus 102 L~ay~~~~p~igY~QGm~~iaa~lL 126 (310)
T 3hzj_A 102 CKAYSVYDEDIGYCQGQSFLAAVLL 126 (310)
T ss_dssp HHHHHHHCTTTCSCTTHHHHHHHHH
T ss_pred HHHHHHHCCCCCccCCHHHHHHHHH
Confidence 4444444557889999998765443
No 55
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=24.25 E-value=57 Score=20.29 Aligned_cols=20 Identities=20% Similarity=0.150 Sum_probs=15.8
Q ss_pred HHHHHHcCCEEEEEeccccc
Q psy5988 27 VRMGIYLGCKVFFIKEGYQG 46 (68)
Q Consensus 27 vr~a~~~G~eV~Gi~~Gy~G 46 (68)
++.|...|+.+++|..|+.+
T Consensus 179 i~aA~~aG~~~I~V~~g~~~ 198 (243)
T 4g9b_A 179 IDAINASGMRSVGIGAGLTG 198 (243)
T ss_dssp HHHHHHHTCEEEEESTTCCS
T ss_pred HHHHHHcCCEEEEECCCCCc
Confidence 34555679999999999876
No 56
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=23.16 E-value=68 Score=20.57 Aligned_cols=29 Identities=17% Similarity=0.111 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-||++-++.|...|++|+-+.|.-.+.-
T Consensus 165 ~~CV~~Ta~~a~~~g~~v~v~~Da~~~~~ 193 (216)
T 3v8e_A 165 EYXVKATAISAAELGYKTTVLLDYTRPIS 193 (216)
T ss_dssp TTHHHHHHHHHHHTTCEEEEEEEEEECSS
T ss_pred ccHHHHHHHHHHHCCCEEEEeccccCCCC
Confidence 45899999999999999999998766654
No 57
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=23.10 E-value=84 Score=18.07 Aligned_cols=25 Identities=8% Similarity=-0.059 Sum_probs=21.3
Q ss_pred cchHHHHHHHHHHHHcCCEEEEEec
Q psy5988 18 GMNAAVRACVRMGIYLGCKVFFIKE 42 (68)
Q Consensus 18 GmNaaIRavvr~a~~~G~eV~Gi~~ 42 (68)
|.+..-+.+++.....|++|.++-.
T Consensus 14 G~G~~G~~la~~L~~~g~~v~vid~ 38 (140)
T 3fwz_A 14 GYGRVGSLLGEKLLASDIPLVVIET 38 (140)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 6788889999998889999998864
No 58
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=22.41 E-value=80 Score=20.00 Aligned_cols=27 Identities=7% Similarity=-0.235 Sum_probs=24.5
Q ss_pred CccchHHHHHHHHHHHHcCCEEEEEec
Q psy5988 16 FAGMNAAVRACVRMGIYLGCKVFFIKE 42 (68)
Q Consensus 16 apGmNaaIRavvr~a~~~G~eV~Gi~~ 42 (68)
-.|-|+++=.+++.+.++|..|++|-.
T Consensus 86 ~Sg~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 86 PDTERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp SCSCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 468999999999999999999999987
No 59
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=22.16 E-value=33 Score=21.85 Aligned_cols=29 Identities=17% Similarity=0.151 Sum_probs=23.8
Q ss_pred hHHHHHHHHHHHHcCCEEEEEeccccccc
Q psy5988 20 NAAVRACVRMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 20 NaaIRavvr~a~~~G~eV~Gi~~Gy~GLi 48 (68)
|-|+.+-++.|...|++|+-+.|+-.+.-
T Consensus 116 ~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~ 144 (208)
T 1yac_A 116 EVCVAFPALSAIEEGFDVFVVTDASGTFN 144 (208)
T ss_dssp CCCCHHHHHHHHHTTCEEEEETTSCBCSS
T ss_pred chhHHHHHHHHHHCCCEEEEECcccCCCC
Confidence 44778888999999999999999876653
No 60
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=21.77 E-value=79 Score=16.93 Aligned_cols=21 Identities=14% Similarity=0.121 Sum_probs=14.9
Q ss_pred HHHHHcCCEEEEEeccccccc
Q psy5988 28 RMGIYLGCKVFFIKEGYQGMV 48 (68)
Q Consensus 28 r~a~~~G~eV~Gi~~Gy~GLi 48 (68)
+.....|++|+-+.+||.+..
T Consensus 71 ~~L~~~G~~v~~l~GG~~~W~ 91 (94)
T 1wv9_A 71 LYLEAEGYEAMSLEGGLQALT 91 (94)
T ss_dssp HHHHHHTCCEEEETTGGGCC-
T ss_pred HHHHHcCCcEEEEcccHHHHH
Confidence 333467888988889988754
No 61
>3qye_A TBC1 domain family member 1; rabgap, RAB, myocytes, hydrolase activator; 2.20A {Homo sapiens} PDB: 3qyb_A
Probab=21.69 E-value=48 Score=22.25 Aligned_cols=22 Identities=23% Similarity=0.276 Sum_probs=15.3
Q ss_pred hhhhhhcCCCCCCCccchHHHH
Q psy5988 3 LKVLNLLPINLLLFAGMNAAVR 24 (68)
Q Consensus 3 ~~~~~~~~~~~~dapGmNaaIR 24 (68)
|+.+....-.+|-|||||.+.-
T Consensus 136 L~ay~~~~p~igY~QGm~~i~a 157 (331)
T 3qye_A 136 LKAYSLLDQEVGYCQGLSFVAG 157 (331)
T ss_dssp HHHHHHHCTTTSSCTTHHHHHH
T ss_pred HHHHHHHCCCccccccHHHHHH
Confidence 4444445567899999998654
No 62
>2wr1_A Hemagglutinin; glycoprotein, lipoprotein, envelope protein, viral protein; HET: SIA GAL NAG BMA MAN; 2.10A {Unidentified influenza virus} PDB: 2wr0_A* 2wr2_A* 2wr3_A* 2wr4_A* 2wr5_A 2wrf_A* 2wr7_A* 2wrb_A* 2wrc_A 2wrd_A 2wre_A* 3gbm_A* 2fk0_A* 3s11_A* 3s13_A* 3s12_A* 3fku_A*
Probab=21.49 E-value=26 Score=26.60 Aligned_cols=12 Identities=75% Similarity=1.398 Sum_probs=10.4
Q ss_pred EEeccccccccC
Q psy5988 39 FIKEGYQGMVDG 50 (68)
Q Consensus 39 Gi~~Gy~GLi~~ 50 (68)
.|.+||+||++|
T Consensus 349 FIEgGW~GmidG 360 (509)
T 2wr1_A 349 FIEGGWQGMVDG 360 (509)
T ss_dssp TBCCCBTTCCSC
T ss_pred hhhcCccchhcc
Confidence 378999999998
No 63
>2qfz_A TBC1 domain family member 22A; RAB-GAP, GTPase activator, structural genomics, structural genomics consortium, SGC, hydrolase activator; 2.10A {Homo sapiens} PDB: 3dzx_A
Probab=20.47 E-value=71 Score=21.60 Aligned_cols=27 Identities=19% Similarity=0.113 Sum_probs=18.5
Q ss_pred hhhhhhhcCCCCCCCccchHHHHHHHH
Q psy5988 2 ILKVLNLLPINLLLFAGMNAAVRACVR 28 (68)
Q Consensus 2 ~~~~~~~~~~~~~dapGmNaaIRavvr 28 (68)
||+++-...=.+|=|||||...--+..
T Consensus 133 IL~~ya~~~p~vgY~QGm~~i~a~ll~ 159 (345)
T 2qfz_A 133 ILFIWAIRHPASGYVQGINDLVTPFFV 159 (345)
T ss_dssp HHHHHHHHCTTTCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCcccChHHHHHHHHH
Confidence 344444455678999999987766543
Done!