Query psy5989
Match_columns 220
No_of_seqs 237 out of 730
Neff 5.2
Searched_HMMs 29240
Date Fri Aug 16 23:43:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5989.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5989hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iqu_A 14-3-3 protein sigma; s 100.0 9.4E-37 3.2E-41 266.6 10.6 112 45-177 120-235 (236)
2 3uzd_A 14-3-3 protein gamma; s 100.0 8.7E-37 3E-41 268.5 7.2 114 46-180 119-236 (248)
3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 3.4E-36 1.2E-40 266.2 8.6 113 45-178 143-259 (261)
4 1o9d_A 14-3-3-like protein C; 100.0 6.4E-36 2.2E-40 264.6 8.7 114 46-180 123-240 (260)
5 2br9_A 14-3-3E, 14-3-3 protein 100.0 5.3E-36 1.8E-40 261.7 7.2 112 46-178 118-233 (234)
6 2npm_A 14-3-3 domain containin 100.0 1.2E-35 4E-40 262.9 8.4 112 46-179 144-259 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 9.2E-35 3.1E-39 257.8 6.2 114 46-180 140-258 (268)
8 2o8p_A 14-3-3 domain containin 100.0 1.6E-30 5.6E-35 226.0 12.2 121 20-174 100-225 (227)
9 3iqu_A 14-3-3 protein sigma; s 99.9 1.2E-24 4.1E-29 190.1 6.8 69 5-73 140-208 (236)
10 3uzd_A 14-3-3 protein gamma; s 99.9 2.3E-24 8E-29 189.5 6.5 69 5-73 138-206 (248)
11 3ubw_A 14-3-3E, 14-3-3 protein 99.9 3.5E-24 1.2E-28 189.5 6.1 69 5-73 163-231 (261)
12 1o9d_A 14-3-3-like protein C; 99.9 7.3E-24 2.5E-28 187.5 7.4 75 5-79 142-216 (260)
13 2br9_A 14-3-3E, 14-3-3 protein 99.9 5.8E-24 2E-28 185.6 6.3 74 5-78 137-210 (234)
14 2npm_A 14-3-3 domain containin 99.9 1.1E-23 3.9E-28 186.3 6.6 71 5-76 163-233 (260)
15 3efz_A 14-3-3 protein; 14-3-3, 99.9 6.5E-24 2.2E-28 188.3 4.8 80 4-83 158-239 (268)
16 2o8p_A 14-3-3 domain containin 99.9 1.6E-22 5.4E-27 175.8 5.1 57 14-70 141-197 (227)
17 3edt_B KLC 2, kinesin light ch 97.9 0.0005 1.7E-08 54.5 15.1 166 14-208 17-198 (283)
18 3edt_B KLC 2, kinesin light ch 97.8 0.0032 1.1E-07 49.8 17.4 181 14-208 59-281 (283)
19 3nf1_A KLC 1, kinesin light ch 97.7 0.003 1E-07 51.0 17.1 183 14-208 85-307 (311)
20 3nf1_A KLC 1, kinesin light ch 97.3 0.012 4E-07 47.5 15.4 165 14-207 43-223 (311)
21 3ulq_A Response regulator aspa 97.2 0.039 1.3E-06 47.3 18.7 179 14-209 159-369 (383)
22 3q15_A PSP28, response regulat 96.7 0.079 2.7E-06 45.5 15.9 177 14-208 157-365 (378)
23 3n71_A Histone lysine methyltr 96.7 0.0073 2.5E-07 56.7 10.0 103 15-157 326-428 (490)
24 3ro3_A PINS homolog, G-protein 96.4 0.078 2.7E-06 37.7 12.0 121 14-152 25-159 (164)
25 3qww_A SET and MYND domain-con 96.4 0.016 5.4E-07 53.6 10.1 102 15-156 315-416 (433)
26 3ro2_A PINS homolog, G-protein 96.2 0.33 1.1E-05 38.7 16.8 117 14-151 21-172 (338)
27 3qwp_A SET and MYND domain-con 96.2 0.011 3.7E-07 54.4 7.8 98 15-152 304-401 (429)
28 3ro3_A PINS homolog, G-protein 96.1 0.21 7.2E-06 35.4 13.8 143 34-208 2-158 (164)
29 4a1s_A PINS, partner of inscut 96.1 0.48 1.6E-05 40.0 16.9 123 12-152 197-333 (411)
30 3sf4_A G-protein-signaling mod 96.1 0.51 1.7E-05 39.2 17.9 127 8-153 157-298 (406)
31 3ro2_A PINS homolog, G-protein 95.9 0.51 1.8E-05 37.5 17.2 164 12-211 157-335 (338)
32 3ulq_A Response regulator aspa 95.8 0.46 1.6E-05 40.5 15.8 121 14-153 119-255 (383)
33 1hz4_A MALT regulatory protein 95.8 0.72 2.5E-05 38.8 16.8 120 15-151 31-164 (373)
34 3q15_A PSP28, response regulat 95.6 0.67 2.3E-05 39.6 16.1 120 14-152 117-252 (378)
35 2qfc_A PLCR protein; TPR, HTH, 95.3 0.22 7.5E-06 41.3 11.7 87 51-152 125-226 (293)
36 3sf4_A G-protein-signaling mod 95.3 0.75 2.6E-05 38.2 14.8 175 14-209 25-257 (406)
37 3gw4_A Uncharacterized protein 95.3 0.42 1.4E-05 36.0 12.2 123 14-152 42-177 (203)
38 4a1s_A PINS, partner of inscut 95.0 1.4 4.8E-05 37.1 16.8 189 14-208 102-332 (411)
39 1qqe_A Vesicular transport pro 94.9 0.35 1.2E-05 40.3 11.7 117 15-150 54-186 (292)
40 2qfc_A PLCR protein; TPR, HTH, 94.8 0.3 1E-05 40.4 11.0 117 15-149 132-264 (293)
41 4g1t_A Interferon-induced prot 94.4 0.95 3.3E-05 39.1 13.5 180 14-208 67-276 (472)
42 3u3w_A Transcriptional activat 94.3 0.39 1.3E-05 39.8 10.5 88 53-154 127-228 (293)
43 3gw4_A Uncharacterized protein 94.0 1.4 4.8E-05 33.0 15.5 102 36-152 21-137 (203)
44 3u3w_A Transcriptional activat 94.0 1.3 4.6E-05 36.4 13.3 120 14-152 131-267 (293)
45 2ho1_A Type 4 fimbrial biogene 94.0 1.7 5.9E-05 33.8 14.1 165 16-209 55-239 (252)
46 2ifu_A Gamma-SNAP; membrane fu 92.1 1.8 6.2E-05 36.1 11.3 119 15-152 53-185 (307)
47 2ond_A Cleavage stimulation fa 92.0 1.1 3.9E-05 37.2 10.0 111 14-150 80-197 (308)
48 2pl2_A Hypothetical conserved 91.7 3.9 0.00013 32.2 12.5 120 14-151 21-147 (217)
49 3hym_B Cell division cycle pro 91.7 4.3 0.00015 32.4 15.4 122 51-208 169-299 (330)
50 2vq2_A PILW, putative fimbrial 91.5 3.4 0.00012 31.0 15.5 166 14-207 24-210 (225)
51 3u4t_A TPR repeat-containing p 91.5 3 0.0001 32.7 11.5 30 180-209 222-251 (272)
52 3n71_A Histone lysine methyltr 90.9 0.56 1.9E-05 43.8 7.6 72 14-124 367-438 (490)
53 3ieg_A DNAJ homolog subfamily 90.8 3.8 0.00013 33.0 11.7 84 96-208 251-335 (359)
54 2ifu_A Gamma-SNAP; membrane fu 90.7 1.6 5.6E-05 36.4 9.7 115 15-149 93-222 (307)
55 2ond_A Cleavage stimulation fa 90.5 2.2 7.4E-05 35.5 10.3 109 13-149 31-161 (308)
56 1fch_A Peroxisomal targeting s 90.4 4.9 0.00017 32.9 12.2 97 31-149 54-159 (368)
57 3qwp_A SET and MYND domain-con 90.3 0.45 1.5E-05 43.5 6.3 74 14-126 345-418 (429)
58 1xnf_A Lipoprotein NLPI; TPR, 89.8 5.8 0.0002 30.9 15.8 111 14-150 21-139 (275)
59 3uq3_A Heat shock protein STI1 89.8 5.5 0.00019 30.5 15.9 54 14-69 54-107 (258)
60 3qky_A Outer membrane assembly 89.7 6.6 0.00023 31.2 13.8 119 16-150 33-176 (261)
61 4eqf_A PEX5-related protein; a 89.5 5.6 0.00019 32.9 12.0 108 14-151 193-310 (365)
62 3qww_A SET and MYND domain-con 89.4 7.2 0.00025 35.7 13.6 64 96-160 315-378 (433)
63 2vq2_A PILW, putative fimbrial 89.3 5.4 0.00019 29.8 11.1 107 14-150 58-175 (225)
64 4gyw_A UDP-N-acetylglucosamine 89.1 3.4 0.00012 40.2 11.8 107 14-150 25-139 (723)
65 3fp2_A TPR repeat-containing p 89.1 11 0.00036 32.7 15.7 113 15-150 327-456 (537)
66 2vsy_A XCC0866; transferase, g 88.8 9.1 0.00031 34.6 13.8 143 14-209 5-158 (568)
67 2ho1_A Type 4 fimbrial biogene 88.4 5.9 0.0002 30.7 10.8 107 14-150 87-203 (252)
68 4gcn_A Protein STI-1; structur 88.4 2.7 9.1E-05 30.6 8.2 52 96-149 59-110 (127)
69 3uq3_A Heat shock protein STI1 88.3 7.1 0.00024 29.8 15.3 84 53-150 17-107 (258)
70 4b4t_Q 26S proteasome regulato 88.2 5.6 0.00019 33.7 11.3 124 14-154 111-248 (434)
71 4i17_A Hypothetical protein; T 87.9 7.9 0.00027 29.9 13.9 167 14-209 23-210 (228)
72 1ouv_A Conserved hypothetical 87.8 9 0.00031 30.4 12.4 169 14-209 22-216 (273)
73 3fp2_A TPR repeat-containing p 87.2 14 0.00047 32.0 16.3 171 17-209 214-408 (537)
74 1hz4_A MALT regulatory protein 86.9 12 0.00042 31.0 15.1 120 14-149 109-242 (373)
75 2y4t_A DNAJ homolog subfamily 85.8 15 0.00051 31.0 12.8 49 96-150 274-323 (450)
76 3cv0_A Peroxisome targeting si 85.7 7.1 0.00024 31.0 10.0 79 51-150 148-234 (327)
77 4gco_A Protein STI-1; structur 85.2 4 0.00014 29.7 7.7 80 14-119 29-116 (126)
78 2pl2_A Hypothetical conserved 84.9 3.3 0.00011 32.6 7.6 105 14-148 100-211 (217)
79 1fch_A Peroxisomal targeting s 84.5 15 0.00052 29.9 15.9 118 45-208 187-314 (368)
80 3vtx_A MAMA; tetratricopeptide 83.8 11 0.00038 27.8 15.7 143 14-209 21-171 (184)
81 4gyw_A UDP-N-acetylglucosamine 83.2 18 0.00063 35.1 13.5 149 36-208 5-174 (723)
82 4ga2_A E3 SUMO-protein ligase 82.7 11 0.00037 28.0 9.3 106 14-148 13-126 (150)
83 3hym_B Cell division cycle pro 82.6 17 0.00056 28.9 13.4 30 180-209 237-266 (330)
84 4i17_A Hypothetical protein; T 82.0 8 0.00027 29.8 8.6 93 14-133 58-165 (228)
85 2ooe_A Cleavage stimulation fa 81.9 20 0.00068 31.9 12.3 108 14-150 337-453 (530)
86 2xev_A YBGF; tetratricopeptide 81.8 10 0.00036 26.0 9.4 49 96-150 56-104 (129)
87 2fbn_A 70 kDa peptidylprolyl i 81.2 15 0.00053 27.8 10.0 46 96-150 105-150 (198)
88 3rkv_A Putative peptidylprolyl 81.1 8.9 0.0003 28.2 8.3 55 96-151 28-92 (162)
89 2q7f_A YRRB protein; TPR, prot 81.0 16 0.00054 27.7 14.8 165 14-209 39-223 (243)
90 4eqf_A PEX5-related protein; a 79.6 24 0.00083 28.9 16.9 155 32-208 56-242 (365)
91 2xpi_A Anaphase-promoting comp 79.3 33 0.0011 30.2 17.8 124 49-209 449-580 (597)
92 2ooe_A Cleavage stimulation fa 79.0 7.2 0.00025 34.9 8.4 113 14-152 302-421 (530)
93 3u4t_A TPR repeat-containing p 78.9 11 0.00039 29.3 8.6 54 96-150 196-249 (272)
94 2lni_A Stress-induced-phosphop 78.8 13 0.00044 25.2 10.2 83 49-150 24-112 (133)
95 2gw1_A Mitochondrial precursor 78.5 30 0.001 29.4 14.0 110 15-150 321-443 (514)
96 3gyz_A Chaperone protein IPGC; 77.5 16 0.00056 27.8 9.0 93 36-150 32-132 (151)
97 2q7f_A YRRB protein; TPR, prot 76.7 22 0.00075 26.9 11.1 109 14-152 73-189 (243)
98 3qky_A Outer membrane assembly 76.1 16 0.00055 28.9 8.9 97 15-133 69-197 (261)
99 1hh8_A P67PHOX, NCF-2, neutrop 75.7 23 0.00078 26.6 10.3 107 20-149 21-148 (213)
100 2gw1_A Mitochondrial precursor 75.6 37 0.0013 28.9 13.6 172 14-208 205-401 (514)
101 3as5_A MAMA; tetratricopeptide 74.7 20 0.00069 25.4 14.5 147 19-209 22-174 (186)
102 3as5_A MAMA; tetratricopeptide 74.7 20 0.00069 25.4 11.8 108 14-151 58-173 (186)
103 1xnf_A Lipoprotein NLPI; TPR, 74.5 27 0.00093 26.9 11.0 165 14-209 59-245 (275)
104 2vsy_A XCC0866; transferase, g 73.7 27 0.00091 31.5 10.7 108 14-151 39-157 (568)
105 1ouv_A Conserved hypothetical 73.6 31 0.0011 27.2 11.3 169 14-209 58-252 (273)
106 4abn_A Tetratricopeptide repea 73.1 8.4 0.00029 34.6 7.1 88 55-150 193-286 (474)
107 2dba_A Smooth muscle cell asso 73.0 20 0.0007 24.8 9.3 84 96-208 45-128 (148)
108 4gco_A Protein STI-1; structur 72.6 24 0.00082 25.3 9.8 81 96-208 30-110 (126)
109 2xpi_A Anaphase-promoting comp 72.5 50 0.0017 29.0 12.4 107 14-150 457-578 (597)
110 2hr2_A Hypothetical protein; a 71.6 8.2 0.00028 30.9 6.0 55 14-70 27-86 (159)
111 1p5q_A FKBP52, FK506-binding p 71.3 39 0.0013 28.6 10.7 50 14-69 163-224 (336)
112 3ieg_A DNAJ homolog subfamily 70.7 38 0.0013 26.9 15.7 139 49-208 128-301 (359)
113 1hh8_A P67PHOX, NCF-2, neutrop 70.6 17 0.00059 27.3 7.5 73 14-107 53-149 (213)
114 1kt0_A FKBP51, 51 kDa FK506-bi 68.7 24 0.00081 31.5 9.1 54 14-69 284-345 (457)
115 1elr_A TPR2A-domain of HOP; HO 68.5 23 0.0008 23.6 8.7 53 96-150 55-107 (131)
116 2xcb_A PCRH, regulatory protei 68.4 30 0.001 24.8 11.0 93 37-151 15-115 (142)
117 3vtx_A MAMA; tetratricopeptide 68.0 33 0.0011 25.1 11.5 106 15-150 56-169 (184)
118 1a17_A Serine/threonine protei 66.3 31 0.0011 24.3 8.3 78 52-150 24-109 (166)
119 1na0_A Designed protein CTPR3; 65.9 26 0.00087 23.1 9.5 80 50-150 18-105 (125)
120 2vgx_A Chaperone SYCD; alterna 65.7 37 0.0013 24.9 9.0 86 43-150 24-117 (148)
121 3k9i_A BH0479 protein; putativ 65.2 16 0.00055 25.3 5.9 47 96-151 44-90 (117)
122 1qqe_A Vesicular transport pro 64.4 57 0.0019 26.5 16.5 128 50-209 46-188 (292)
123 4gcn_A Protein STI-1; structur 63.8 37 0.0013 24.2 9.7 87 96-207 25-111 (127)
124 2kck_A TPR repeat; tetratricop 63.6 27 0.00093 22.6 7.9 84 96-209 23-107 (112)
125 4g1t_A Interferon-induced prot 63.4 69 0.0023 27.2 11.8 117 18-149 31-165 (472)
126 4b4t_Q 26S proteasome regulato 60.7 73 0.0025 26.6 12.6 94 49-155 63-168 (434)
127 2h6f_A Protein farnesyltransfe 59.7 49 0.0017 29.1 9.3 50 97-154 218-268 (382)
128 2y4t_A DNAJ homolog subfamily 58.3 81 0.0028 26.3 16.1 166 14-208 42-240 (450)
129 3qtm_A Uncharacterized protein 58.2 50 0.0017 29.6 8.8 146 60-215 151-336 (346)
130 3rkv_A Putative peptidylprolyl 57.8 51 0.0017 23.9 8.5 46 96-150 80-125 (162)
131 1w3b_A UDP-N-acetylglucosamine 57.8 79 0.0027 26.1 17.5 17 52-68 180-196 (388)
132 3cv0_A Peroxisome targeting si 57.0 69 0.0023 25.1 16.1 29 180-208 207-235 (327)
133 3rjv_A Putative SEL1 repeat pr 57.0 66 0.0023 24.9 9.0 83 53-151 101-197 (212)
134 3sz7_A HSC70 cochaperone (SGT) 56.4 54 0.0019 23.8 9.8 77 53-150 23-107 (164)
135 4abn_A Tetratricopeptide repea 55.8 1.1E+02 0.0038 27.1 16.1 118 15-150 120-249 (474)
136 2h6f_A Protein farnesyltransfe 53.9 70 0.0024 28.1 9.3 107 14-150 113-228 (382)
137 2fbn_A 70 kDa peptidylprolyl i 53.5 68 0.0023 24.0 9.8 49 96-150 55-116 (198)
138 3mkr_A Coatomer subunit epsilo 52.8 96 0.0033 25.5 12.2 46 96-150 183-228 (291)
139 1w3b_A UDP-N-acetylglucosamine 52.7 97 0.0033 25.5 15.7 134 51-208 213-368 (388)
140 2e2e_A Formate-dependent nitri 52.3 65 0.0022 23.4 8.1 82 14-120 60-151 (177)
141 2if4_A ATFKBP42; FKBP-like, al 52.2 13 0.00045 31.7 4.1 13 15-27 196-208 (338)
142 3q49_B STIP1 homology and U bo 51.8 55 0.0019 22.4 9.7 77 14-111 25-109 (137)
143 2dba_A Smooth muscle cell asso 51.0 56 0.0019 22.3 9.6 80 50-150 37-127 (148)
144 3k9i_A BH0479 protein; putativ 50.7 57 0.002 22.3 8.1 49 96-150 7-55 (117)
145 1na3_A Designed protein CTPR2; 50.4 40 0.0014 21.2 5.5 46 96-150 26-71 (91)
146 2fo7_A Synthetic consensus TPR 50.2 51 0.0018 21.6 11.8 107 14-150 17-131 (136)
147 3upv_A Heat shock protein STI1 49.8 59 0.002 22.2 9.6 47 96-151 55-101 (126)
148 1wao_1 Serine/threonine protei 49.4 86 0.003 28.1 9.3 47 95-150 22-68 (477)
149 1p5q_A FKBP52, FK506-binding p 49.3 1.2E+02 0.004 25.5 9.8 46 96-150 213-258 (336)
150 1ihg_A Cyclophilin 40; ppiase 49.3 46 0.0016 28.9 7.3 54 96-150 240-301 (370)
151 2l6j_A TPR repeat-containing p 49.2 37 0.0013 22.3 5.3 45 96-149 21-65 (111)
152 2vyi_A SGTA protein; chaperone 48.6 55 0.0019 21.5 9.8 77 53-150 24-108 (131)
153 1kt0_A FKBP51, 51 kDa FK506-bi 48.2 1.1E+02 0.0037 27.1 9.7 53 96-150 285-345 (457)
154 3msv_A Nuclear import adaptor, 48.1 60 0.002 29.5 7.7 146 60-215 198-383 (393)
155 1zu2_A Mitochondrial import re 48.0 90 0.0031 24.7 8.2 29 5-38 9-37 (158)
156 1hxi_A PEX5, peroxisome target 47.7 70 0.0024 22.5 7.4 76 53-149 29-112 (121)
157 3q49_B STIP1 homology and U bo 47.3 65 0.0022 22.0 9.8 80 52-152 20-107 (137)
158 2xev_A YBGF; tetratricopeptide 45.5 35 0.0012 23.2 4.8 49 96-150 19-67 (129)
159 3ma5_A Tetratricopeptide repea 44.7 69 0.0024 21.5 7.7 49 96-153 24-72 (100)
160 2pzi_A Probable serine/threoni 44.5 1.4E+02 0.0048 28.0 10.3 102 96-209 450-564 (681)
161 2kc7_A BFR218_protein; tetratr 40.9 68 0.0023 20.8 5.6 47 96-150 17-63 (99)
162 2pzi_A Probable serine/threoni 40.9 71 0.0024 30.0 7.6 108 15-148 408-526 (681)
163 1wao_1 Serine/threonine protei 39.5 1.1E+02 0.0038 27.4 8.4 18 52-69 51-68 (477)
164 3sz7_A HSC70 cochaperone (SGT) 39.5 1E+02 0.0036 22.1 9.8 46 96-150 28-73 (164)
165 2yhc_A BAMD, UPF0169 lipoprote 38.3 1.3E+02 0.0046 23.0 11.0 29 180-208 185-213 (225)
166 2c2l_A CHIP, carboxy terminus 37.8 1.4E+02 0.0047 24.2 8.1 75 14-109 20-102 (281)
167 3ub0_A Non-structural protein 37.7 62 0.0021 27.2 5.8 49 95-163 19-78 (199)
168 2kck_A TPR repeat; tetratricop 37.0 81 0.0028 20.1 7.6 78 51-149 16-104 (112)
169 1ihg_A Cyclophilin 40; ppiase 36.8 1.6E+02 0.0054 25.4 8.7 46 96-150 290-335 (370)
170 2xm6_A Protein corresponding t 36.7 2.1E+02 0.0072 24.8 13.1 16 134-149 235-250 (490)
171 2lni_A Stress-induced-phosphop 36.6 92 0.0031 20.6 7.7 81 96-208 33-113 (133)
172 2vyi_A SGTA protein; chaperone 34.7 95 0.0033 20.3 9.8 81 96-208 29-109 (131)
173 3upv_A Heat shock protein STI1 34.5 1.1E+02 0.0037 20.8 9.8 46 96-150 21-66 (126)
174 2r17_C Vacuolar protein sortin 34.3 13 0.00045 32.9 1.3 42 95-136 211-253 (298)
175 1elr_A TPR2A-domain of HOP; HO 34.1 99 0.0034 20.3 10.2 88 96-208 21-108 (131)
176 2e2e_A Formate-dependent nitri 34.0 1.3E+02 0.0045 21.7 10.0 13 96-108 61-73 (177)
177 1a17_A Serine/threonine protei 32.6 1.2E+02 0.0042 21.0 9.8 103 96-208 30-146 (166)
178 3urz_A Uncharacterized protein 32.3 1.7E+02 0.0057 22.3 8.2 63 51-133 64-134 (208)
179 2c2l_A CHIP, carboxy terminus 32.0 1.6E+02 0.0055 23.8 7.6 45 96-149 21-65 (281)
180 2yhc_A BAMD, UPF0169 lipoprote 31.5 1.8E+02 0.006 22.3 15.0 49 15-69 21-69 (225)
181 4a5x_A MITD1, MIT domain-conta 28.1 1.6E+02 0.0055 20.8 6.8 64 139-208 14-82 (86)
182 1elw_A TPR1-domain of HOP; HOP 27.9 1.2E+02 0.0041 19.3 9.9 82 96-209 21-102 (118)
183 4ga2_A E3 SUMO-protein ligase 27.7 1.7E+02 0.0059 21.1 8.9 106 92-208 10-129 (150)
184 3qou_A Protein YBBN; thioredox 26.4 2E+02 0.0069 23.2 7.3 105 15-150 134-247 (287)
185 2if4_A ATFKBP42; FKBP-like, al 25.6 2.5E+02 0.0084 23.6 7.9 45 96-149 247-291 (338)
186 3qou_A Protein YBBN; thioredox 24.8 2.5E+02 0.0086 22.6 7.6 102 96-208 134-248 (287)
187 2fo7_A Synthetic consensus TPR 23.7 1.5E+02 0.0052 19.1 12.7 114 51-208 11-132 (136)
188 3urz_A Uncharacterized protein 22.4 2.6E+02 0.0087 21.2 15.9 46 96-150 71-116 (208)
189 3ub0_A Non-structural protein 21.4 59 0.002 27.3 2.9 20 52-71 37-56 (199)
190 1na0_A Designed protein CTPR3; 20.7 1.8E+02 0.006 18.7 9.8 81 96-208 26-106 (125)
191 1b89_A Protein (clathrin heavy 20.5 1.3E+02 0.0046 27.8 5.5 89 96-208 139-236 (449)
192 2kat_A Uncharacterized protein 20.4 2E+02 0.0068 19.1 7.5 47 96-151 36-82 (115)
No 1
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=9.4e-37 Score=266.65 Aligned_cols=112 Identities=36% Similarity=0.581 Sum_probs=106.4
Q ss_pred chhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhccc
Q psy5989 45 NFSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLA 124 (220)
Q Consensus 45 N~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~ 124 (220)
.--|||+.+.+| +|||++++..|++ |++++++|++||++|.++|+++|||||||||||+
T Consensus 120 eskVFY~KmKGD--------------yyRYlAE~~~g~~-------r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLa 178 (236)
T 3iqu_A 120 ESRVFYLKMKGD--------------YYRYLAEVATGDD-------KKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLA 178 (236)
T ss_dssp HHHHHHHHHHHH--------------HHHHHHHHCCSTT-------HHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHH
T ss_pred HHHHHHHHhhhh--------------HHHHHHHhcCchH-------HHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHH
Confidence 467999988876 9999999999988 9999999999999999999999999999999999
Q ss_pred chhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh----hhhhhhhHHHHHhhcccccc
Q psy5989 125 LNFSVFYYEIINSPARACHLAKQVKYSCIGASR----DTKRSVCLLCEIFHTMSSSG 177 (220)
Q Consensus 125 LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld----~~~~d~~lilq~L~~~s~~s 177 (220)
||||||||||+|+|++||++||+|||+||+++| ++|+|+|+|||+|||+..+|
T Consensus 179 LNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlW 235 (236)
T 3iqu_A 179 LNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLW 235 (236)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999997 78999999999999987665
No 2
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=8.7e-37 Score=268.50 Aligned_cols=114 Identities=41% Similarity=0.678 Sum_probs=106.2
Q ss_pred hhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccc
Q psy5989 46 FSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLAL 125 (220)
Q Consensus 46 ~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~L 125 (220)
--|||+.+.+| +|||++++..|++ |++++++|++||+.|.++|+++|||||||||||+|
T Consensus 119 skVFY~KmKGD--------------yyRYlAE~~~g~~-------r~~~~~~a~~aY~~A~~iA~~~L~pthPirLGLaL 177 (248)
T 3uzd_A 119 SKVFYLKMKGD--------------YYRYLAEVATGEK-------RATVVESSEKAYSEAHEISKEHMQPTHPIRLGLAL 177 (248)
T ss_dssp HHHHHHHHHHH--------------HHHHHHHHCCHHH-------HHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HHHHHHHhhhh--------------HHHHHHHhcCchH-------HHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHH
Confidence 46888877766 9999999999988 99999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh----hhhhhhhHHHHHhhcccccchhH
Q psy5989 126 NFSVFYYEIINSPARACHLAKQVKYSCIGASR----DTKRSVCLLCEIFHTMSSSGEKE 180 (220)
Q Consensus 126 N~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld----~~~~d~~lilq~L~~~s~~s~r~ 180 (220)
|||||||||+|+|++||+|||+|||+||+++| ++|+|+|+|||+|||+..+|..+
T Consensus 178 NfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~ 236 (248)
T 3uzd_A 178 NYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD 236 (248)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999999999998 78999999999999988777765
No 3
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=266.18 Aligned_cols=113 Identities=39% Similarity=0.630 Sum_probs=107.1
Q ss_pred chhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhccc
Q psy5989 45 NFSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLA 124 (220)
Q Consensus 45 N~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~ 124 (220)
.-.|||+.+.+| ++||++++..|++ |++++++|++||++|.++|+++|||||||||||+
T Consensus 143 EskVFY~KMKGD--------------YyRYlAE~~~g~~-------rk~~~e~a~~aY~~A~~iA~~~L~pThPirLGLa 201 (261)
T 3ubw_A 143 ESKVFYYKMKGD--------------YHRYLAEFATGND-------RKEAAENSLVAYKAASDIAMTELPPTHPIRLGLA 201 (261)
T ss_dssp HHHHHHHHHHHH--------------HHHHHHHHCCHHH-------HHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHH
T ss_pred HHHHHHHHhhcc--------------HHHHHHhhcCchH-------HHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHH
Confidence 467999988877 9999999999988 9999999999999999999999999999999999
Q ss_pred chhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh----hhhhhhhHHHHHhhcccccch
Q psy5989 125 LNFSVFYYEIINSPARACHLAKQVKYSCIGASR----DTKRSVCLLCEIFHTMSSSGE 178 (220)
Q Consensus 125 LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld----~~~~d~~lilq~L~~~s~~s~ 178 (220)
||||||||||+|+|++||+|||+|||+||+++| ++|+|+|+|||+|||+..+|.
T Consensus 202 LNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWt 259 (261)
T 3ubw_A 202 LNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWT 259 (261)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999997 789999999999999887664
No 4
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=6.4e-36 Score=264.59 Aligned_cols=114 Identities=39% Similarity=0.623 Sum_probs=104.3
Q ss_pred hhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccc
Q psy5989 46 FSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLAL 125 (220)
Q Consensus 46 ~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~L 125 (220)
-.|||+.+.+| +|||++++..|++ |++++++|+++|+.|+++|+.+|||||||||||+|
T Consensus 123 skVFY~KMKGD--------------YyRYlaE~~~g~~-------r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaL 181 (260)
T 1o9d_A 123 SKVFYLKMKGD--------------YHRYLAEFKTGAE-------RKEAAESTLTAYKAAQDIATTELAPTHPIRLGLAL 181 (260)
T ss_dssp HHHHHHHHHHH--------------HHHHHHHHCCSHH-------HHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred hHHHHHHHhcc--------------HHHHHHHhcCchH-------HHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHH
Confidence 47999988876 9999999999987 99999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh----hhhhhhhHHHHHhhcccccchhH
Q psy5989 126 NFSVFYYEIINSPARACHLAKQVKYSCIGASR----DTKRSVCLLCEIFHTMSSSGEKE 180 (220)
Q Consensus 126 N~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld----~~~~d~~lilq~L~~~s~~s~r~ 180 (220)
|||||||||+|+|++||.|||+|||+||+++| ++|+|+|+|||+|||+..+|..+
T Consensus 182 NfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~ 240 (260)
T 1o9d_A 182 NFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 240 (260)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999997 88999999999999998888765
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=5.3e-36 Score=261.67 Aligned_cols=112 Identities=39% Similarity=0.632 Sum_probs=105.2
Q ss_pred hhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccc
Q psy5989 46 FSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLAL 125 (220)
Q Consensus 46 ~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~L 125 (220)
-.|||+.+.+| +|||++++..|++ |++++++|+++|++|+++|+++|||||||||||+|
T Consensus 118 skVFy~KmKGD--------------yyRYlaE~~~g~~-------r~~~~e~a~~aY~~A~~iA~~~L~pthPirLgLaL 176 (234)
T 2br9_A 118 SKVFYYKMKGD--------------YHRYLAEFATGND-------RKEAAENSLVAYKAASDIAMTELPPTHPIRLGLAL 176 (234)
T ss_dssp HHHHHHHHHHH--------------HHHHHHHHCCHHH-------HHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred hHHHHHHHhcc--------------HHHHHHHHcCchH-------HHHHHHHHHHHHHHHHHHHHccCCCCCcHHHHHHH
Confidence 46888877766 9999999999877 99999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh----hhhhhhhHHHHHhhcccccch
Q psy5989 126 NFSVFYYEIINSPARACHLAKQVKYSCIGASR----DTKRSVCLLCEIFHTMSSSGE 178 (220)
Q Consensus 126 N~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld----~~~~d~~lilq~L~~~s~~s~ 178 (220)
|||||||||+|+|++||.|||+|||+||+++| ++|+|+|+|||+|||+..+|.
T Consensus 177 N~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWt 233 (234)
T 2br9_A 177 NFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWT 233 (234)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999997 889999999999999876653
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=1.2e-35 Score=262.89 Aligned_cols=112 Identities=34% Similarity=0.522 Sum_probs=106.1
Q ss_pred hhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccc
Q psy5989 46 FSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLAL 125 (220)
Q Consensus 46 ~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~L 125 (220)
-.|||+.+.+| +|||++++..|++ |++++++|++||++|+++| .+|||||||||||+|
T Consensus 144 skVFY~KMKGD--------------YyRYlaE~~~g~~-------r~~~~e~a~~aY~~A~~iA-~~L~pthPirLGLaL 201 (260)
T 2npm_A 144 SKVFYFKMKGD--------------YHRYISEFSTGDS-------KQSSAEDALKAYKDATVVA-KDLEPTHPIRLGLAL 201 (260)
T ss_dssp HHHHHHHHHHH--------------HHHHHHHHCCHHH-------HHHHHHHHHHHHHHHHHHH-TTSCTTCHHHHHHHH
T ss_pred HHHHHHHHhcc--------------HHHHHHHhcCchH-------HHHHHHHHHHHHHHHHHHH-HhCCCCCcHHHHHHH
Confidence 47999988876 9999999999877 9999999999999999999 899999999999999
Q ss_pred hhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh----hhhhhhhHHHHHhhcccccchh
Q psy5989 126 NFSVFYYEIINSPARACHLAKQVKYSCIGASR----DTKRSVCLLCEIFHTMSSSGEK 179 (220)
Q Consensus 126 N~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld----~~~~d~~lilq~L~~~s~~s~r 179 (220)
|||||||||+|+|++||.|||+|||+||+++| ++|+|+|+|||+|||+..+|..
T Consensus 202 NfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts 259 (260)
T 2npm_A 202 NFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTA 259 (260)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999998 8899999999999998877753
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=9.2e-35 Score=257.80 Aligned_cols=114 Identities=18% Similarity=0.318 Sum_probs=106.3
Q ss_pred hhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcC--CCCCcchhcc
Q psy5989 46 FSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKM--QPTHPIRLGL 123 (220)
Q Consensus 46 ~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L--~pt~PirLGL 123 (220)
--|||+.+.+| +|||++++..|++ |++++++|++||++|.++|+++| ||||||||||
T Consensus 140 skVFY~KMKGD--------------YyRYlAE~~~g~e-------rk~~~e~a~~aYq~A~eiA~~~L~~~pThPiRLGL 198 (268)
T 3efz_A 140 ARAFCIKLKGD--------------LMRYKAEILKDEE-------KNQCIKQAVEFYEDALQRERSFLEKYPSDPLYLAT 198 (268)
T ss_dssp HHHHHHHHHHH--------------HHHHHHTTCCHHH-------HHHHHHHHHHHHHHHHHHHHHHCTTGGGCHHHHHH
T ss_pred hHHHHHhccch--------------HHHHHHhhcCchH-------HHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHH
Confidence 67999988877 9999999999988 99999999999999999999999 9999999999
Q ss_pred cchhHHHHHHHhcChHHHHHHHHHHHHH---HHHhhhhhhhhhhHHHHHhhcccccchhH
Q psy5989 124 ALNFSVFYYEIINSPARACHLAKQVKYS---CIGASRDTKRSVCLLCEIFHTMSSSGEKE 180 (220)
Q Consensus 124 ~LN~SVF~yEIl~~~~~A~~iAk~Afde---Ai~eld~~~~d~~lilq~L~~~s~~s~r~ 180 (220)
+||||||||||+|+|++||++||+|||+ ||+++|.+..|+|+|||+|||+..+|..+
T Consensus 199 aLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~eestlImQLLRDNLtlWtsd 258 (268)
T 3efz_A 199 ILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENTEKLLKILRDNVSQWEQG 258 (268)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999 99999999999999999999988777654
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=99.97 E-value=1.6e-30 Score=226.02 Aligned_cols=121 Identities=12% Similarity=0.110 Sum_probs=100.1
Q ss_pred HHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHHHHHHH
Q psy5989 20 AYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMNDPEFSPLFPCSLAVVEDSQ 99 (220)
Q Consensus 20 aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~~e~~~~~~~k~~~~e~a~ 99 (220)
--++.+++-...|-|.. .-.|||+.+.+| +|||++++..|+ +++|+
T Consensus 100 iC~dil~lld~~Lip~a--------EskVFY~KMKGD--------------YyRYlAE~~~g~------------~e~a~ 145 (227)
T 2o8p_A 100 FLQSFEDCVDRLVEKSF--------FSKFFKLKVKSD--------------ISRYKLEFGLCS------------LEDSK 145 (227)
T ss_dssp HHHHHHHHHHTCCCCSH--------HHHHHHHHHHHH--------------HHHHHHHTTSSC------------HHHHH
T ss_pred HHhhHHHHHHHhccCcH--------HHHHHHHHHhhh--------------HHHHHHHHcccc------------HHHHH
Confidence 33444555555566654 568999988877 999999998885 69999
Q ss_pred HHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHH---HHhhhhh--hhhhhHHHHHhhccc
Q psy5989 100 KAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSC---IGASRDT--KRSVCLLCEIFHTMS 174 (220)
Q Consensus 100 ~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeA---i~eld~~--~~d~~lilq~L~~~s 174 (220)
+||+.|.++|+++|||||||||||+||||||||||+|+|++||.+||+||+.+ +..-|++ +.+.|+|||+|+|+.
T Consensus 146 ~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m~~~~~~~~~~q~~~d~~ 225 (227)
T 2o8p_A 146 KIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENMDRKAQITVYLQGIKDYI 225 (227)
T ss_dssp HHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999976 4444555 555789999999975
No 9
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=99.90 E-value=1.2e-24 Score=190.14 Aligned_cols=69 Identities=49% Similarity=0.780 Sum_probs=66.8
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHH
Q psy5989 5 GDEPQEGAVVDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFC 73 (220)
Q Consensus 5 ~~~~~r~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~ 73 (220)
.+|++|++++++|++||++|.++|+.+|||||||||||+||||||||||+|+|++||.|||+||++...
T Consensus 140 ~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~ 208 (236)
T 3iqu_A 140 ATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMA 208 (236)
T ss_dssp CCSTTHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999976
No 10
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=99.90 E-value=2.3e-24 Score=189.51 Aligned_cols=69 Identities=57% Similarity=0.923 Sum_probs=67.0
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHH
Q psy5989 5 GDEPQEGAVVDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFC 73 (220)
Q Consensus 5 ~~~~~r~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~ 73 (220)
.+|++|++++++|++||++|.++|+.+|||||||||||+||||||||||+|+|++||.|||+||++...
T Consensus 138 ~~g~~r~~~~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~ 206 (248)
T 3uzd_A 138 ATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIA 206 (248)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999976
No 11
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=99.89 E-value=3.5e-24 Score=189.46 Aligned_cols=69 Identities=51% Similarity=0.842 Sum_probs=66.8
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHH
Q psy5989 5 GDEPQEGAVVDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFC 73 (220)
Q Consensus 5 ~~~~~r~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~ 73 (220)
.+|++|++++++|++||++|.++|+.+|||||||||||+||||||||||+|+|++||.|||+||++...
T Consensus 163 ~~g~~rk~~~e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~ 231 (261)
T 3ubw_A 163 ATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIA 231 (261)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999999965
No 12
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=99.89 E-value=7.3e-24 Score=187.49 Aligned_cols=75 Identities=48% Similarity=0.746 Sum_probs=70.8
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhc
Q psy5989 5 GDEPQEGAVVDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLM 79 (220)
Q Consensus 5 ~~~~~r~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~ 79 (220)
.+|++|++++++|++||++|.++|+.+|||||||||||+||||||||||+|+|++||.||++||++....+-.+.
T Consensus 142 ~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~ 216 (260)
T 1o9d_A 142 KTGAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLG 216 (260)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccC
Confidence 478999999999999999999999999999999999999999999999999999999999999999998766553
No 13
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=99.89 E-value=5.8e-24 Score=185.63 Aligned_cols=74 Identities=49% Similarity=0.755 Sum_probs=69.2
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHh
Q psy5989 5 GDEPQEGAVVDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFCFYFFL 78 (220)
Q Consensus 5 ~~~~~r~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~ 78 (220)
.+|++|++++++|++||++|.++|+.+|||||||||||+||||||||||+|+|++||.|||+||++....+-.+
T Consensus 137 ~~g~~r~~~~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l 210 (234)
T 2br9_A 137 ATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTL 210 (234)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGC
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcc
Confidence 47899999999999999999999999999999999999999999999999999999999999999998744433
No 14
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=99.88 E-value=1.1e-23 Score=186.26 Aligned_cols=71 Identities=42% Similarity=0.628 Sum_probs=67.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHHHHH
Q psy5989 5 GDEPQEGAVVDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFCFYF 76 (220)
Q Consensus 5 ~~~~~r~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~ 76 (220)
.+|++|++++++|++||++|.++| .+|||||||||||+||||||||||+|+|++||.|||+||++....+-
T Consensus 163 ~~g~~r~~~~e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld 233 (260)
T 2npm_A 163 STGDSKQSSAEDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLD 233 (260)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGG
T ss_pred cCchHHHHHHHHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhh
Confidence 478999999999999999999999 89999999999999999999999999999999999999999987543
No 15
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=99.88 E-value=6.5e-24 Score=188.30 Aligned_cols=80 Identities=18% Similarity=0.282 Sum_probs=70.8
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHhhcC--CCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCC
Q psy5989 4 DGDEPQEGAVVDDSQKAYQQAFEISKSKM--QPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMND 81 (220)
Q Consensus 4 ~~~~~~r~~~~e~a~~aYq~A~eiA~~~L--~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~ 81 (220)
..+|++|++++++|++|||+|.++|+++| ||||||||||+||||||||||+|+|++||.|||+||++.+.-+.+++.=
T Consensus 158 ~~~g~erk~~~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L 237 (268)
T 3efz_A 158 ILKDEEKNQCIKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQF 237 (268)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CC
T ss_pred hcCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccC
Confidence 46899999999999999999999999999 9999999999999999999999999999999999999965545555544
Q ss_pred CC
Q psy5989 82 PE 83 (220)
Q Consensus 82 ~e 83 (220)
++
T Consensus 238 ~e 239 (268)
T 3efz_A 238 SE 239 (268)
T ss_dssp CH
T ss_pred Ch
Confidence 33
No 16
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=99.86 E-value=1.6e-22 Score=175.85 Aligned_cols=57 Identities=18% Similarity=0.250 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH 70 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d 70 (220)
+++|++||+.|.++|+.+|||||||||||+||||||||||+|+|++||.+|++||+.
T Consensus 141 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 141 LEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999993
No 17
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.92 E-value=0.0005 Score=54.52 Aligned_cols=166 Identities=12% Similarity=0.061 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHH--------------HHHHHHh-
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHY--------------FCFYFFL- 78 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~--------------~~~~~~~- 78 (220)
.+.|...|++|+++..+.+++.+|.......+.+. .|-..++.++|....++++... +..+..+
T Consensus 17 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~ 95 (283)
T 3edt_B 17 RGSAVPLCKQALEDLEKTSGHDHPDVATMLNILAL-VYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLY 95 (283)
T ss_dssp SSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHH
Confidence 34678899999999887777777866555555554 4556889999998888877542 3333444
Q ss_pred -cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh
Q psy5989 79 -MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASR 157 (220)
Q Consensus 79 -~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld 157 (220)
..++ .+.|...|++|+.+.++...|.+|.......|.+..++. .++.++|+...+++++-.-....
T Consensus 96 ~~~g~------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~ 162 (283)
T 3edt_B 96 GKRGK------------YKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIYATRLG 162 (283)
T ss_dssp HTTTC------------HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHhcc------------HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhcC
Confidence 2222 378999999999999888888899888888888877766 69999998888887765433221
Q ss_pred hhhhhhhHHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 158 DTKRSVCLLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 158 ~~~~d~~lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
.-..+ .-.-+..++.+.....+|++-...++++++.
T Consensus 163 ~~~~~---------------~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 163 PDDPN---------------VAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp TTCHH---------------HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCHH---------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 10100 1122344566666667777777777776653
No 18
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=97.76 E-value=0.0032 Score=49.79 Aligned_cols=181 Identities=14% Similarity=0.150 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHH--------------HHHHHHh-
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHY--------------FCFYFFL- 78 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~--------------~~~~~~~- 78 (220)
.+.|...|++|++++...+.+.+|.......|.+. .|--.++.++|....++|+..+ +..+..+
T Consensus 59 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 137 (283)
T 3edt_B 59 YKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAV-LYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLC 137 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHH-HHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHH-HHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Confidence 46789999999999987777777766555555554 4557889999998888877553 2223333
Q ss_pred -cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh
Q psy5989 79 -MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASR 157 (220)
Q Consensus 79 -~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld 157 (220)
..++ .+.|...|++++++.+....+.+|.......|.+..++. .++.++|+...++++.-+-..-.
T Consensus 138 ~~~g~------------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~~~~ 204 (283)
T 3edt_B 138 QNQGK------------AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHEKEF 204 (283)
T ss_dssp HTTTC------------HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHS
T ss_pred HHcCC------------HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhcC
Confidence 1222 378999999999998888888899888888888877766 69999999988888775433210
Q ss_pred -hhhhhhh---HHH--------------------HHhhccc--ccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 158 -DTKRSVC---LLC--------------------EIFHTMS--SSGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 158 -~~~~d~~---lil--------------------q~L~~~s--~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
....... ..+ ..++... ....-.-+..++.+-.+..+|++-....+++++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 281 (283)
T 3edt_B 205 GSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRN 281 (283)
T ss_dssp SSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred CCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 1111111 000 0111111 1122335667888888889999998888887653
No 19
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.74 E-value=0.003 Score=51.03 Aligned_cols=183 Identities=16% Similarity=0.187 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHH--------------HHHHHHhc
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHY--------------FCFYFFLM 79 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~--------------~~~~~~~~ 79 (220)
.+.|...|++|++++.....+.+|.......+.+ ..|.-+++.++|....++++... +..+..+.
T Consensus 85 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~-~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~ 163 (311)
T 3nf1_A 85 YKDAANLLNDALAIREKTLGKDHPAVAATLNNLA-VLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLC 163 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHH-HHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Confidence 4678899999999887766666666554444444 44556889999999988887653 22333331
Q ss_pred CCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHh----
Q psy5989 80 NDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGA---- 155 (220)
Q Consensus 80 ~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~e---- 155 (220)
.. ..-.+.|...|++++++.+....+.+|.......+.+..++. .++.++|+...++++..+-..
T Consensus 164 ~~----------~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 232 (311)
T 3nf1_A 164 QN----------QGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHEREFGS 232 (311)
T ss_dssp HT----------TTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HH----------cCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 11 111378999999999999887788888888777788777666 699999999999888754331
Q ss_pred hhhhhhhhhHHHHHhhcc----------------------cccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 156 SRDTKRSVCLLCEIFHTM----------------------SSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 156 ld~~~~d~~lilq~L~~~----------------------s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
++............+... .....-.-+..++.+-.+..+|++-....+++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l 307 (311)
T 3nf1_A 233 VDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRS 307 (311)
T ss_dssp -----CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 111111111111111100 01122234667888888899999999988887654
No 20
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=97.33 E-value=0.012 Score=47.47 Aligned_cols=165 Identities=12% Similarity=0.052 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHH--------------HHHHHHh-
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHY--------------FCFYFFL- 78 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~--------------~~~~~~~- 78 (220)
.+.|...|+++++++.....+.+|...-...+.+.. |-..++.++|....++++... +..+..+
T Consensus 43 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~ 121 (311)
T 3nf1_A 43 YEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALV-YRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLY 121 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHH
Confidence 467888999999988765555666655444455444 446789999998888877542 2223333
Q ss_pred -cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh
Q psy5989 79 -MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASR 157 (220)
Q Consensus 79 -~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld 157 (220)
..++ .+.|...|++++++.+....+.+|.......|.+..++. .++.++|+...+++++.......
T Consensus 122 ~~~g~------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~~~ 188 (311)
T 3nf1_A 122 GKRGK------------YKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQN-QGKYEEVEYYYQRALEIYQTKLG 188 (311)
T ss_dssp HTTTC------------HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHTSC
T ss_pred HHcCc------------HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHhC
Confidence 1222 378899999999998876777788877777777777665 68999988888777765433321
Q ss_pred hhhhhhhHHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHh
Q psy5989 158 DTKRSVCLLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTE 207 (220)
Q Consensus 158 ~~~~d~~lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~ 207 (220)
....+. -.-...++.+-.+..+|++-....+++++
T Consensus 189 ~~~~~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 189 PDDPNV---------------AKTKNNLASCYLKQGKFKQAETLYKEILT 223 (311)
T ss_dssp TTCHHH---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCHHH---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 111111 11233455555555666666666665554
No 21
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=97.24 E-value=0.039 Score=47.29 Aligned_cols=179 Identities=13% Similarity=0.041 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------------HHHHHHHh--c
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------------YFCFYFFL--M 79 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------------~~~~~~~~--~ 79 (220)
.+.|...|++|+++.... +..+.+.+.+++.--..|.-+++.++|...-++|+.. .+..+..+ .
T Consensus 159 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 236 (383)
T 3ulq_A 159 TYFSMDYARQAYEIYKEH--EAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNS 236 (383)
T ss_dssp HHHHHHHHHHHHHHHHTC--STTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhC--ccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 357888999999988642 3334555666665555667789999999998888754 44445554 3
Q ss_pred CCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhh
Q psy5989 80 NDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDT 159 (220)
Q Consensus 80 ~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~ 159 (220)
.++. ++|...|++|+++++..-. .|.......|.+..++. ++++++|....++|+.-+-..-+..
T Consensus 237 ~g~~------------~~A~~~~~~al~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 301 (383)
T 3ulq_A 237 QSQY------------EDAIPYFKRAIAVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYSQKAGDVI 301 (383)
T ss_dssp TTCH------------HHHHHHHHHHHHHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred CCCH------------HHHHHHHHHHHHHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 3333 7899999999999875322 13334445556665555 7999999999888876653321211
Q ss_pred hhh-----------------hhHHHHHhhccccc-chhHHHHHHHHHHHHHhhHHHHHHHHHHhHhcC
Q psy5989 160 KRS-----------------VCLLCEIFHTMSSS-GEKEELVQRAKLAEQAERYDDMAAAMKAVTETG 209 (220)
Q Consensus 160 ~~d-----------------~~lilq~L~~~s~~-s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~~ 209 (220)
+.. ...-+..+...... ...+-...++.+-.+..+|++-..+.++.++..
T Consensus 302 ~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~ 369 (383)
T 3ulq_A 302 YLSEFEFLKSLYLSGPDEEAIQGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVR 369 (383)
T ss_dssp HHHHHHHHHHHHTSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 100 11112222222111 122345567888888888999888888877654
No 22
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=96.72 E-value=0.079 Score=45.46 Aligned_cols=177 Identities=14% Similarity=0.061 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------------HHHHHHHh--c
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------------YFCFYFFL--M 79 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------------~~~~~~~~--~ 79 (220)
.+.|...|++|+++.... +..+.+++.+++.--..|.-+++.++|...-++|+.. .+..+..+ .
T Consensus 157 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 234 (378)
T 3q15_A 157 THVSMYHILQALDIYQNH--PLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDR 234 (378)
T ss_dssp HHHHHHHHHHHHHHHHTS--TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhC--CCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 357888899999887642 2224456666665555667789999999988888763 22333333 2
Q ss_pred CCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhh
Q psy5989 80 NDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDT 159 (220)
Q Consensus 80 ~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~ 159 (220)
.++ .++|...|++|+++++.. .+|.......|.+..++. +++.++|+...++|+.-+-..-+..
T Consensus 235 ~~~------------~~~A~~~~~~al~~~~~~---~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 298 (378)
T 3q15_A 235 SGD------------DQMAVEHFQKAAKVSREK---VPDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDHITARSHKF 298 (378)
T ss_dssp HTC------------HHHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCTTCCSC
T ss_pred CCC------------HHHHHHHHHHHHHHHHhh---CChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHcCCHH
Confidence 222 378999999999988754 344443444555665555 7999999998888876432211111
Q ss_pred hhh-----------------hhHHHHHhhccccc-chhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 160 KRS-----------------VCLLCEIFHTMSSS-GEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 160 ~~d-----------------~~lilq~L~~~s~~-s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
+.. ...-+..+...... ...+-...++.+-.+..+|++-..+.+++++.
T Consensus 299 ~~~~~~~l~~ly~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~ 365 (378)
T 3q15_A 299 YKELFLFLQAVYKETVDERKIHDLLSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKA 365 (378)
T ss_dssp HHHHHHHHHHHHSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 111 11122222221111 11223445777777788888888887777654
No 23
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=96.71 E-value=0.0073 Score=56.67 Aligned_cols=103 Identities=8% Similarity=-0.067 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHH
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMNDPEFSPLFPCSLAV 94 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~~e~~~~~~~k~~~ 94 (220)
+.|...|++++++..+.|.|.||--+...-|.+.-|. ..|..
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~---------------------------~~g~~----------- 367 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLS---------------------------YLQAY----------- 367 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH---------------------------HTTCH-----------
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH---------------------------HhcCH-----------
Confidence 4567788999999988999999986665555544332 22333
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh
Q psy5989 95 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASR 157 (220)
Q Consensus 95 ~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld 157 (220)
+.|...|++|+++-++.++|.||--+....|.++.|+. .++.++|..+-++|+.---..+-
T Consensus 368 -~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~~lG 428 (490)
T 3n71_A 368 -EEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLVTHG 428 (490)
T ss_dssp -HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhC
Confidence 67888999999999999999999999999999888777 69999999888887765555544
No 24
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=96.44 E-value=0.078 Score=37.70 Aligned_cols=121 Identities=14% Similarity=-0.008 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHH------------HHHHHHh--c
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHY------------FCFYFFL--M 79 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~------------~~~~~~~--~ 79 (220)
.+.|...|++|++++.. ..+|..++.+++.--..|-..++.++|....++++... +..+..+ .
T Consensus 25 ~~~A~~~~~~al~~~~~---~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~ 101 (164)
T 3ro3_A 25 FRDAVIAHEQRLLIAKE---FGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL 101 (164)
T ss_dssp HHHHHHHHHHHHHHHHH---HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---hCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 46788899999988864 23344445555544445556889999999888877543 2233333 2
Q ss_pred CCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy5989 80 NDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSC 152 (220)
Q Consensus 80 ~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeA 152 (220)
.++. +.|...|++|++++... +.+|.......+.+..++. .++.++|+...+++++-+
T Consensus 102 ~~~~------------~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 102 LQDY------------EKAIDYHLKHLAIAQEL--KDRIGEGRACWSLGNAYTA-LGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp TTCH------------HHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HhhH------------HHHHHHHHHHHHHHHHc--cchHhHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHH
Confidence 2232 78889999999887642 2233333344455555544 689999988887776543
No 25
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=96.41 E-value=0.016 Score=53.56 Aligned_cols=102 Identities=11% Similarity=-0.035 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHH
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMNDPEFSPLFPCSLAV 94 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~~e~~~~~~~k~~~ 94 (220)
+.|...|++++++..+.|.|.||-.+...-|-+.-|. ..|..
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~---------------------------~~g~~----------- 356 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCL---------------------------YMQDW----------- 356 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH---------------------------HTTCH-----------
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHH---------------------------hhcCH-----------
Confidence 5678889999999999999999986655555433332 22333
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhh
Q psy5989 95 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGAS 156 (220)
Q Consensus 95 ~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~el 156 (220)
++|...|++|+++-++.++|.||--.....|.+.-|+. .++.++|..+-++|+.=-...+
T Consensus 357 -~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~~l 416 (433)
T 3qww_A 357 -EGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEVAH 416 (433)
T ss_dssp -HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHHHc
Confidence 67889999999999999999999998888888887776 6899999888877765444433
No 26
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=96.25 E-value=0.33 Score=38.68 Aligned_cols=117 Identities=12% Similarity=-0.003 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------------HHHHHHHh--c
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------------YFCFYFFL--M 79 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------------~~~~~~~~--~ 79 (220)
.+.|...|++|+++ .|.+|..++.+++.--..|-..+++++|....++++.. .+..+..+ .
T Consensus 21 ~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 95 (338)
T 3ro2_A 21 CRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKV 95 (338)
T ss_dssp HHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----CcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHH
Confidence 46788888888874 57777766666555455566789999999998877654 33333333 2
Q ss_pred CCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhccc-chhHHHHHHHhcC--------------------h
Q psy5989 80 NDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLA-LNFSVFYYEIINS--------------------P 138 (220)
Q Consensus 80 ~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~-LN~SVF~yEIl~~--------------------~ 138 (220)
.++. +.|...|++|+++.... .+|.....+ .+.+..++. .++ .
T Consensus 96 ~g~~------------~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~ 159 (338)
T 3ro2_A 96 LGNF------------DEAIVCCQRHLDISREL---NDKVGEARALYNLGNVYHA-KGKSFGCPGPQDTGEFPEDVRNAL 159 (338)
T ss_dssp TTCH------------HHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHH-HHHTSSSSSCC----CCHHHHHHH
T ss_pred ccCH------------HHHHHHHHHHHHHHHHh---cCchHHHHHHHHHHHHHHH-cCcccccchhhhhhhhhhhHHHHH
Confidence 2333 78899999999888742 223333333 344444444 566 6
Q ss_pred HHHHHHHHHHHHH
Q psy5989 139 ARACHLAKQVKYS 151 (220)
Q Consensus 139 ~~A~~iAk~Afde 151 (220)
++|....++++.-
T Consensus 160 ~~A~~~~~~a~~~ 172 (338)
T 3ro2_A 160 QAAVDLYEENLSL 172 (338)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6776666665543
No 27
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=96.23 E-value=0.011 Score=54.37 Aligned_cols=98 Identities=7% Similarity=-0.070 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHH
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMNDPEFSPLFPCSLAV 94 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~~e~~~~~~~k~~~ 94 (220)
+.|...|++++++..+.|.|.||-.+.+.-|-+.-| . ..|..
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y----------------------~-----~~g~~----------- 345 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDAC----------------------I-----NLGLL----------- 345 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHH----------------------H-----HHTCH-----------
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHH----------------------H-----hhccH-----------
Confidence 456777888888877889999996554444432222 1 12333
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy5989 95 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSC 152 (220)
Q Consensus 95 ~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeA 152 (220)
+.|...|++++++-++.++|.||.......|.++-|.. .++.++|..+-++|++--
T Consensus 346 -~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 346 -EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp -HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHH
Confidence 77889999999999989999999999999999888777 688999888777776533
No 28
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=96.13 E-value=0.21 Score=35.37 Aligned_cols=143 Identities=9% Similarity=-0.066 Sum_probs=88.9
Q ss_pred CCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------------HHHHHHHh--cCCCCCCCCccccHHHHHHHH
Q psy5989 34 PTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------------YFCFYFFL--MNDPEFSPLFPCSLAVVEDSQ 99 (220)
Q Consensus 34 pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------------~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~ 99 (220)
+.+|...+.+++.--..|-..+++++|+...++++.. .+..+..+ ..++. +.|.
T Consensus 2 ~~d~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~------------~~A~ 69 (164)
T 3ro3_A 2 PGSRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEF------------ETAS 69 (164)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH------------HHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCH------------HHHH
Confidence 3456666666666666667788999999888887754 33334443 22232 7889
Q ss_pred HHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccccchh
Q psy5989 100 KAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSSSGEK 179 (220)
Q Consensus 100 ~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~~s~r 179 (220)
..|++|+++.... +.+|.......|.+..++. .++.++|+...+++++-+-..-+. ... -
T Consensus 70 ~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~-----~~~------------~ 129 (164)
T 3ro3_A 70 EYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTL-LQDYEKAIDYHLKHLAIAQELKDR-----IGE------------G 129 (164)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCH-----HHH------------H
T ss_pred HHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHccch-----HhH------------H
Confidence 9999999988752 2223333444556665555 799999998888877654322111 000 1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 180 EELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 180 ~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
.-+..++.+..+..+|++-....++..+.
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 158 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEI 158 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 22345666666777888877777776654
No 29
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=96.08 E-value=0.48 Score=40.04 Aligned_cols=123 Identities=11% Similarity=0.029 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------------HHHHHHHh-
Q psy5989 12 AVVDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------------YFCFYFFL- 78 (220)
Q Consensus 12 ~~~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------------~~~~~~~~- 78 (220)
...+.|...|++|+++.... + ++...+.+++.-...|.-.++.++|....++++.. .+..+..+
T Consensus 197 ~~~~~A~~~~~~al~~~~~~--~-~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~ 273 (411)
T 4a1s_A 197 EALTRAVEFYQENLKLMRDL--G-DRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSH 273 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--T-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHc--C-CHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 44778889999999887643 2 22333344444444556689999999988888754 44445554
Q ss_pred -cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy5989 79 -MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSC 152 (220)
Q Consensus 79 -~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeA 152 (220)
..++. +.|...|++|+++.... +.++.......+.+..+ .-.++.++|+...++++.-+
T Consensus 274 ~~~g~~------------~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~ 333 (411)
T 4a1s_A 274 IFLGQF------------EDAAEHYKRTLALAVEL--GEREVEAQSCYSLGNTY-TLLHEFNTAIEYHNRHLAIA 333 (411)
T ss_dssp HTTTCH------------HHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHH
T ss_pred HHCcCH------------HHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHH
Confidence 22232 78899999999988752 22333333344455544 45799999988877776544
No 30
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=96.07 E-value=0.51 Score=39.23 Aligned_cols=127 Identities=9% Similarity=0.001 Sum_probs=81.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------------HHHHH
Q psy5989 8 PQEGAVVDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------------YFCFY 75 (220)
Q Consensus 8 ~~r~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------------~~~~~ 75 (220)
++-....+.|...|++|+++.... +.+|. .+.+++.-...|--+++.++|....++++.- .+..+
T Consensus 157 ~~a~~~~~~A~~~~~~al~~~~~~--~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l 233 (406)
T 3sf4_A 157 EEVRDALQAAVDFYEENLSLVTAL--GDRAA-QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNL 233 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT--TCHHH-HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhc--cCcHH-HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 344455788999999999987642 33333 3444444344555688999999988888754 44444
Q ss_pred HHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccc-hhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy5989 76 FFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLAL-NFSVFYYEIINSPARACHLAKQVKYSC 152 (220)
Q Consensus 76 ~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~L-N~SVF~yEIl~~~~~A~~iAk~AfdeA 152 (220)
..+ ..++. +.|...|++|+++.... + ++...+.++ +.+.. |.-.++.++|+...++++.-+
T Consensus 234 a~~~~~~g~~------------~~A~~~~~~al~~~~~~--~-~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~a~~~~ 297 (406)
T 3sf4_A 234 GNAYIFLGEF------------ETASEYYKKTLLLARQL--K-DRAVEAQSCYSLGNT-YTLLQDYEKAIDYHLKHLAIA 297 (406)
T ss_dssp HHHHHHTTCH------------HHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCh------------HHHHHHHHHHHHHHHhC--c-CchHHHHHHHHHHHH-HHHhCcHHHHHHHHHHHHHHH
Confidence 444 23333 78899999999988642 2 333334333 44444 445799999998888776654
Q ss_pred H
Q psy5989 153 I 153 (220)
Q Consensus 153 i 153 (220)
-
T Consensus 298 ~ 298 (406)
T 3sf4_A 298 Q 298 (406)
T ss_dssp H
T ss_pred H
Confidence 3
No 31
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=95.86 E-value=0.51 Score=37.53 Aligned_cols=164 Identities=10% Similarity=0.000 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------------HHHHHHHh-
Q psy5989 12 AVVDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------------YFCFYFFL- 78 (220)
Q Consensus 12 ~~~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------------~~~~~~~~- 78 (220)
+..+.|...|++++++.... + ++...+.+++.-...|--.++.++|....++++.. .+..+..+
T Consensus 157 ~~~~~A~~~~~~a~~~~~~~--~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~ 233 (338)
T 3ro2_A 157 NALQAAVDLYEENLSLVTAL--G-DRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAY 233 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--T-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc--C-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Confidence 44678888888888877542 2 23333444444445556688999999988888754 33333333
Q ss_pred -cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccc-hhHHHHHHHhcChHHHHHHHHHHHHHHHHhh
Q psy5989 79 -MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLAL-NFSVFYYEIINSPARACHLAKQVKYSCIGAS 156 (220)
Q Consensus 79 -~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~L-N~SVF~yEIl~~~~~A~~iAk~AfdeAi~el 156 (220)
..++ .+.|...|++++++.... + +|.....++ +.+.. |.-.++.++|+...++++.-.-..-
T Consensus 234 ~~~g~------------~~~A~~~~~~al~~~~~~--~-~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~a~~~~~~~~ 297 (338)
T 3ro2_A 234 IFLGE------------FETASEYYKKTLLLARQL--K-DRAVEAQSCYSLGNT-YTLLQDYEKAIDYHLKHLAIAQELK 297 (338)
T ss_dssp HHHTC------------HHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHcCC------------HHHHHHHHHHHHHHHHhh--c-chhHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHhcC
Confidence 2222 278889999999888642 2 233333333 44444 4457999998888777665442211
Q ss_pred hhhhhhhhHHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhcCce
Q psy5989 157 RDTKRSVCLLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTETGVE 211 (220)
Q Consensus 157 d~~~~d~~lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~~~e 211 (220)
+ .. ..-.-+..++.+..+..+|++-....++.++...+
T Consensus 298 ~-----~~------------~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 298 D-----RI------------GEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp C-----HH------------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred C-----cH------------HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 1 00 11223455677777778888888888887765443
No 32
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=95.83 E-value=0.46 Score=40.47 Aligned_cols=121 Identities=13% Similarity=0.040 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH-------------HHHHHHHh--
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH-------------YFCFYFFL-- 78 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d-------------~~~~~~~~-- 78 (220)
-+.|...|++|.+++.. . .+|...+.+++.--..|-.+++.++|+...++|+.- .+..+..+
T Consensus 119 ~~~A~~~~~~al~~~~~-~--~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 195 (383)
T 3ulq_A 119 YLSAIKFFKKAESKLIF-V--KDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFL 195 (383)
T ss_dssp HHHHHHHHHHHHTTGGG-C--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh-C--CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHH
Confidence 35677888888877653 2 234444445444334445589999999999888764 22223333
Q ss_pred cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcc-cchhHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy5989 79 MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGL-ALNFSVFYYEIINSPARACHLAKQVKYSCI 153 (220)
Q Consensus 79 ~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL-~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi 153 (220)
..++. ++|...|++|++++.+. + ++..++. ..|.+..|+. +++.++|+...++|++-+-
T Consensus 196 ~~g~~------------~~A~~~~~~al~~~~~~--~-~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~~ 255 (383)
T 3ulq_A 196 DLKQY------------EDAISHFQKAYSMAEAE--K-QPQLMGRTLYNIGLCKNS-QSQYEDAIPYFKRAIAVFE 255 (383)
T ss_dssp HTTCH------------HHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HhcCH------------HHHHHHHHHHHHHHHHc--C-ChHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 22333 78999999999998753 3 3444444 4455555554 7999999998888876543
No 33
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=95.80 E-value=0.72 Score=38.78 Aligned_cols=120 Identities=11% Similarity=-0.001 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHH------------HHHHHHh--cC
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHY------------FCFYFFL--MN 80 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~------------~~~~~~~--~~ 80 (220)
+.|...+++|+. ..++.+|...+.+++.--..|-..++.++|....++|+.-. ...+..+ ..
T Consensus 31 ~~A~~~~~~al~----~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 106 (373)
T 1hz4_A 31 DEAERLAKLALE----ELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQ 106 (373)
T ss_dssp HHHHHHHHHHHH----TCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH----cCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHC
Confidence 445666666654 23555565455556554555667899999999888877532 2223333 33
Q ss_pred CCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHH
Q psy5989 81 DPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYS 151 (220)
Q Consensus 81 ~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afde 151 (220)
|+. +.|...|++++.++...-.+.+|.......|.+..+++ .++.++|....+++++.
T Consensus 107 G~~------------~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 107 GFL------------QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEV 164 (373)
T ss_dssp TCH------------HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred CCH------------HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 333 78899999999998865455556655556667777766 59999998888877654
No 34
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=95.62 E-value=0.67 Score=39.59 Aligned_cols=120 Identities=10% Similarity=-0.046 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHH-------------HHHHHh--
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYF-------------CFYFFL-- 78 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~-------------~~~~~~-- 78 (220)
-+.|...|++|..++.. + + +|...+.+++.--..|-.++++++|....++|+.-+- ..+..+
T Consensus 117 ~~~A~~~~~~al~~~~~-~-~-~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~ 193 (378)
T 3q15_A 117 YVEAIGYYREAEKELPF-V-S-DDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYD 193 (378)
T ss_dssp HHHHHHHHHHHHTTGGG-C-C-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh-C-C-ChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 35678888888877653 2 2 2333444444333344467889999988888775322 222222
Q ss_pred cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhccc-chhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy5989 79 MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLA-LNFSVFYYEIINSPARACHLAKQVKYSC 152 (220)
Q Consensus 79 ~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~-LN~SVF~yEIl~~~~~A~~iAk~AfdeA 152 (220)
..++. ++|...|++|++++++. .+|...+.+ .|.+.-|+. .++.++|+...++|++-+
T Consensus 194 ~~~~~------------~~A~~~~~~al~~~~~~---~~~~~~~~~~~~lg~~y~~-~~~~~~A~~~~~~al~~~ 252 (378)
T 3q15_A 194 DFKHY------------DKALPHLEAALELAMDI---QNDRFIAISLLNIANSYDR-SGDDQMAVEHFQKAAKVS 252 (378)
T ss_dssp HTTCH------------HHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HhCCH------------HHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 22222 78999999999998752 233344444 445555554 799999998888877644
No 35
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=95.34 E-value=0.22 Score=41.27 Aligned_cols=87 Identities=5% Similarity=-0.116 Sum_probs=61.2
Q ss_pred HHhhcChHHHHHHHHHHH------------HHHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy5989 51 YEILNSPDKACQLAKQVC------------AHYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPT 116 (220)
Q Consensus 51 yEIl~~~~~A~~lAk~A~------------~d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt 116 (220)
|.-.++.++|....++|+ ...+..+..+ ..++. ++|...|++|+++.+. . |.
T Consensus 125 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~------------~~A~~~~~kal~~~~~-~-~~ 190 (293)
T 2qfc_A 125 VLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYL------------KKGIDLFEQILKQLEA-L-HD 190 (293)
T ss_dssp HHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHHHHHH-S-CC
T ss_pred HhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCH------------HHHHHHHHHHHHHHHh-c-Cc
Confidence 455678999999988887 2344444444 33333 7899999999998774 3 33
Q ss_pred Ccc-hhcccchhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy5989 117 HPI-RLGLALNFSVFYYEIINSPARACHLAKQVKYSC 152 (220)
Q Consensus 117 ~Pi-rLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeA 152 (220)
+|. ...+..|.+..|+. +++.++|+...++|++-+
T Consensus 191 ~~~~~~~~~~nlg~~y~~-~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 191 NEEFDVKVRYNHAKALYL-DSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHH
Confidence 332 22456677776665 799999999999988766
No 36
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=95.28 E-value=0.75 Score=38.20 Aligned_cols=175 Identities=9% Similarity=-0.013 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------------HHHHHHHh--c
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------------YFCFYFFL--M 79 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------------~~~~~~~~--~ 79 (220)
.+.|...|++|+++ .|.+|-.++.+++.--..|-..++.++|....++|+.. .+..+..+ .
T Consensus 25 ~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 99 (406)
T 3sf4_A 25 CRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKV 99 (406)
T ss_dssp HHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 45678888888764 56677665555554444555688999999988877544 33334444 2
Q ss_pred CCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhc-ccchhHHHHHHHhcC--------------------h
Q psy5989 80 NDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLG-LALNFSVFYYEIINS--------------------P 138 (220)
Q Consensus 80 ~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLG-L~LN~SVF~yEIl~~--------------------~ 138 (220)
.++. +.|...|++|+++.... .+|...+ ...+.+..++. .++ .
T Consensus 100 ~g~~------------~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~~~~a~~~~ 163 (406)
T 3sf4_A 100 LGNF------------DEAIVCCQRHLDISREL---NDKVGEARALYNLGNVYHA-KGKSFGCPGPQDVGEFPEEVRDAL 163 (406)
T ss_dssp TTCH------------HHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHH-HHHTCC-------CCCCHHHHHHH
T ss_pred cCCH------------HHHHHHHHHHHHHHHhc---ccccchHHHHHHHHHHHHH-cCCcccccccchhhhhhhhHHHHH
Confidence 2333 78899999999988752 1233333 33444554444 566 6
Q ss_pred HHHHHHHHHHHHHHHHhhh------------------hhhhhhh----HHHHHhhcccc-cchhHHHHHHHHHHHHHhhH
Q psy5989 139 ARACHLAKQVKYSCIGASR------------------DTKRSVC----LLCEIFHTMSS-SGEKEELVQRAKLAEQAERY 195 (220)
Q Consensus 139 ~~A~~iAk~AfdeAi~eld------------------~~~~d~~----lilq~L~~~s~-~s~r~~~~~~akl~eq~ery 195 (220)
++|+...++++.-+-..-+ .-+.++. -.+++..+... ...-.-+..++.+.....+|
T Consensus 164 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 243 (406)
T 3sf4_A 164 QAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEF 243 (406)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCh
Confidence 7777666666543222110 0011111 11111111110 01111455566667777778
Q ss_pred HHHHHHHHHhHhcC
Q psy5989 196 DDMAAAMKAVTETG 209 (220)
Q Consensus 196 ~~m~~~~~~~~~~~ 209 (220)
++-....+++++..
T Consensus 244 ~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 244 ETASEYYKKTLLLA 257 (406)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88777777776654
No 37
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=95.27 E-value=0.42 Score=36.03 Aligned_cols=123 Identities=8% Similarity=-0.039 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHH-------------HHHHHhcC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYF-------------CFYFFLMN 80 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~-------------~~~~~~~~ 80 (220)
.+.|...|++|++++.. . .+|...+.+++.--..|...++.++|....++|+..+- ..+..+..
T Consensus 42 ~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 118 (203)
T 3gw4_A 42 FDEARASFQALQQQAQK-S--GDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVAL 118 (203)
T ss_dssp HHHHHHHHHHHHHHHHT-T--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-c--CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence 45788899999998864 2 23344455555545556678999999988888776521 11111100
Q ss_pred CCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy5989 81 DPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSC 152 (220)
Q Consensus 81 ~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeA 152 (220)
+..-.+.|...|++|+++++. ..+|...+.+++.-...|--.+++++|+...++|++-+
T Consensus 119 ----------~~g~~~~A~~~~~~al~~~~~---~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 119 ----------HFGDLAGARQEYEKSLVYAQQ---ADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIF 177 (203)
T ss_dssp ----------HHTCHHHHHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ----------HhCCHHHHHHHHHHHHHHHHh---ccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 111136888999999988764 33454444444443344445789998887777766544
No 38
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=94.99 E-value=1.4 Score=37.11 Aligned_cols=189 Identities=6% Similarity=-0.054 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------------HHHHHHHhc--
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------------YFCFYFFLM-- 79 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------------~~~~~~~~~-- 79 (220)
.+.|...|++|++++... +.+|... .+++.--..|..+++.++|....++++.. .+..+..+.
T Consensus 102 ~~~A~~~~~~al~~~~~~--~~~~~~~-~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 178 (411)
T 4a1s_A 102 YNKAMQYHKHDLTLAKSM--NDRLGEA-KSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHA 178 (411)
T ss_dssp HHHHHHHHHHHHHHHHHT--TCHHHHH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc--cCchHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Confidence 467888899998887642 3334333 33333344556778899998888877665 233333331
Q ss_pred CCC-----CCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHH
Q psy5989 80 NDP-----EFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIG 154 (220)
Q Consensus 80 ~~~-----e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~ 154 (220)
.++ ...++..+-....+.|...|++++++.... +.+|.......|.+..++. .++.++|+...++++.-.-.
T Consensus 179 ~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 179 KGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYYL-LGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred cCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHh
Confidence 111 111122223344788999999999888653 3334444444555555444 79999999888888665433
Q ss_pred hhh------------------hhhhhhhHHH----HHhhcccc-cchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 155 ASR------------------DTKRSVCLLC----EIFHTMSS-SGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 155 eld------------------~~~~d~~lil----q~L~~~s~-~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
.-+ .-+.++...+ ++..+... ...-.-+..++.+..+..+|++-....++.++.
T Consensus 256 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 332 (411)
T 4a1s_A 256 FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAI 332 (411)
T ss_dssp HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 211 0122222111 11111110 011234556777777777888877777776553
No 39
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=94.88 E-value=0.35 Score=40.32 Aligned_cols=117 Identities=6% Similarity=-0.072 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------------HHHHHHHhc--C
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------------YFCFYFFLM--N 80 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------------~~~~~~~~~--~ 80 (220)
+.|..+|++|+++... + -+|...+.+++---..|.-++++++|+..-++|+.- .+..+..+- .
T Consensus 54 ~~A~~~~~~al~~~~~-~--~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~ 130 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-A--GNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILEND 130 (292)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH-h--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 5778888888887653 2 244445556655555677789999999888888753 333444441 1
Q ss_pred -CCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchh-cccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 81 -DPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRL-GLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 81 -~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirL-GL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
++. +.|...|++|+++.... .+|... ....|.+.++.. ++++++|+..-+++..
T Consensus 131 lg~~------------~~A~~~~~~Al~~~~~~---~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 131 LHDY------------AKAIDCYELAGEWYAQD---QSVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIK 186 (292)
T ss_dssp TCCH------------HHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred hcCH------------HHHHHHHHHHHHHHHhC---CChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 333 78999999999987531 122222 234566777666 6899999987776654
No 40
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=94.79 E-value=0.3 Score=40.43 Aligned_cols=117 Identities=9% Similarity=-0.072 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH-------------HHHHHHHHh--c
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA-------------HYFCFYFFL--M 79 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~-------------d~~~~~~~~--~ 79 (220)
+.|...|++|++++.. ..+|.....++|.--..|--+++.++|...-++|+. ..+..+..+ .
T Consensus 132 ~~A~~~~~~al~~~~~---~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~ 208 (293)
T 2qfc_A 132 EYCILELKKLLNQQLT---GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL 208 (293)
T ss_dssp HHHHHHHHHHHTTCCC---SSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc---CCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHH
Confidence 4667777777765432 233333444454433444558999999999998872 233344443 2
Q ss_pred CCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHH-HHHHHHHH
Q psy5989 80 NDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARA-CHLAKQVK 149 (220)
Q Consensus 80 ~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A-~~iAk~Af 149 (220)
.++. ++|...|++|++++.. ..++..++.+++.--..|.-+++.++| ...-++|+
T Consensus 209 ~~~y------------~~Al~~~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 209 DSRY------------EESLYQVNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp TTCH------------HHHHHHHHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HhhH------------HHHHHHHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 3333 8999999999999864 334445555544434455568999998 44344444
No 41
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=94.36 E-value=0.95 Score=39.06 Aligned_cols=180 Identities=13% Similarity=0.088 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHhhcC-CCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccc--
Q psy5989 14 VDDSQKAYQQAFEISKSKM-QPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMNDPEFSPLFPC-- 90 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L-~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~~e~~~~~~~-- 90 (220)
-+.|++.|++|+++....- ...||-.+...-|.+.-| .-+++.++|...-+++..-.-. +. + .+.+....
T Consensus 67 ~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y-~~~g~~~~A~~~~~ka~~i~~~----~~-~-~~~~~~~~~~ 139 (472)
T 4g1t_A 67 NEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVY-YHMGRLSDVQIYVDKVKHVCEK----FS-S-PYRIESPELD 139 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHH----SC-C-SSCCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHH-HHcCChHHHHHHHHHHHHHhHh----cc-c-ccchhhHHHH
Confidence 4678999999999876543 234565544445555544 4578899998777766542211 11 1 01110000
Q ss_pred ----------cHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHH------HHH
Q psy5989 91 ----------SLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYS------CIG 154 (220)
Q Consensus 91 ----------k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afde------Ai~ 154 (220)
...--++|..+|++|+++ .|.||--.. .+....+.+.-.++.++|+..-++|+.- +..
T Consensus 140 ~~~g~~~~~~~~~~y~~A~~~~~kal~~-----~p~~~~~~~-~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~ 213 (472)
T 4g1t_A 140 CEEGWTRLKCGGNQNERAKVCFEKALEK-----KPKNPEFTS-GLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKV 213 (472)
T ss_dssp HHHHHHHHHHCTTHHHHHHHHHHHHHHH-----STTCHHHHH-HHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHH
T ss_pred HHHHHHHHHHccccHHHHHHHHHHHHHh-----CCCCHHHHH-HHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHH
Confidence 011236788899988864 588875321 1112334455567777887776666531 000
Q ss_pred h-------hh---hhhhhhhHHH-HHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 155 A-------SR---DTKRSVCLLC-EIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 155 e-------ld---~~~~d~~lil-q~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
. +- .-+.++.-++ +.+.... ..-.-+..++.+-.+..+|++-....+++++.
T Consensus 214 ~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~--~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 276 (472)
T 4g1t_A 214 LLALKLHKMREEGEEEGEGEKLVEEALEKAP--GVTDVLRSAAKFYRRKDEPDKAIELLKKALEY 276 (472)
T ss_dssp HHHHHHHHCC------CHHHHHHHHHHHHCS--SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHhCc--cHHHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Confidence 0 00 0111221111 1121111 22334566777777888888888888877664
No 42
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=94.27 E-value=0.39 Score=39.76 Aligned_cols=88 Identities=5% Similarity=-0.072 Sum_probs=64.8
Q ss_pred hhcChHHHHHHHHHHHHH------------HHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy5989 53 ILNSPDKACQLAKQVCAH------------YFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHP 118 (220)
Q Consensus 53 Il~~~~~A~~lAk~A~~d------------~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~P 118 (220)
-.++.++|+..-++|+.- .+..+..+ ..++. ++|...|++|+++.+. ++..+|
T Consensus 127 ~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~------------~~A~~~~~~al~~~~~-~~~~~~ 193 (293)
T 3u3w_A 127 KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYL------------KKGIDLFEQILKQLEA-LHDNEE 193 (293)
T ss_dssp TSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHHHHHH-SSCCHH
T ss_pred cccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCH------------HHHHHHHHHHHHHHHh-cccchh
Confidence 445889999988888751 23334433 22333 7899999999998874 556667
Q ss_pred chhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHH
Q psy5989 119 IRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIG 154 (220)
Q Consensus 119 irLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~ 154 (220)
....+..|.+..|++ +++.++|+...++|++-+..
T Consensus 194 ~~~~~~~nlg~~y~~-~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 194 FDVKVRYNHAKALYL-DSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHH
Confidence 777788899988887 69999999999888776543
No 43
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=94.04 E-value=1.4 Score=33.04 Aligned_cols=102 Identities=13% Similarity=0.134 Sum_probs=66.7
Q ss_pred CccccccccchhHHHHHhhcChHHHHHHHHHHHH------------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHH
Q psy5989 36 HPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKA 101 (220)
Q Consensus 36 ~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~a 101 (220)
+|...+.+++.--..|-..++.++|....++|+. ..+..+..+ ..++. +.|...
T Consensus 21 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~------------~~A~~~ 88 (203)
T 3gw4_A 21 HPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNW------------DAARRC 88 (203)
T ss_dssp STTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH------------HHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCH------------HHHHHH
Confidence 4444555666555566678999999999988887 223333333 22333 789999
Q ss_pred HHHHHHHHHhcCCCCCcchhccc-chhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy5989 102 YQEAFDIAKSKMQPTHPIRLGLA-LNFSVFYYEIINSPARACHLAKQVKYSC 152 (220)
Q Consensus 102 Yq~A~eiA~~~L~pt~PirLGL~-LN~SVF~yEIl~~~~~A~~iAk~AfdeA 152 (220)
|++|+++++. . +.+|...+.+ .|.+.-++. .+++++|....++++.-+
T Consensus 89 ~~~al~~~~~-~-~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 89 FLEERELLAS-L-PEDPLAASANAYEVATVALH-FGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHH-S-CCCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-c-CccHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHH
Confidence 9999999873 3 3345344444 444554444 799999998888877653
No 44
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=94.03 E-value=1.3 Score=36.41 Aligned_cols=120 Identities=10% Similarity=-0.040 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH-------------HHHHHHHh--
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH-------------YFCFYFFL-- 78 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d-------------~~~~~~~~-- 78 (220)
.+.|...|++|+++.. +..++.....++|.--..|.-+++.++|...-++|+.. .+..+..+
T Consensus 131 ~~~Ai~~~~~al~~~~---~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~ 207 (293)
T 3u3w_A 131 YEYCILELKKLLNQQL---TGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY 207 (293)
T ss_dssp HHHHHHHHHHHHHTCC---CCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc---ccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 3677888888887432 23333333334444344455688999999999998842 22333333
Q ss_pred cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccch-hHHHHHHHhc-ChHHHHHHHHHHHHHH
Q psy5989 79 MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALN-FSVFYYEIIN-SPARACHLAKQVKYSC 152 (220)
Q Consensus 79 ~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN-~SVF~yEIl~-~~~~A~~iAk~AfdeA 152 (220)
..++. ++|...|++|++++... .++..++.+++ .+.-++. ++ +.++|+..-++|+.-+
T Consensus 208 ~~~~y------------~~A~~~~~~al~~~~~~---~~~~~~~~~~~~lg~~~~~-~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 208 LDSRY------------EESLYQVNKAIEISCRI---NSMALIGQLYYQRGECLRK-LEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HTTCH------------HHHHHHHHHHHHHHHHT---TBCTTHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHH
T ss_pred HHhHH------------HHHHHHHHHHHHHHHHc---CcHHHHHHHHHHHHHHHHH-hCCcHHHHHHHHHHHHHHH
Confidence 22333 78999999999998752 33444454444 4544444 66 4588887777766544
No 45
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=93.95 E-value=1.7 Score=33.81 Aligned_cols=165 Identities=15% Similarity=0.101 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCCCC
Q psy5989 16 DSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFSPL 87 (220)
Q Consensus 16 ~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~~~ 87 (220)
.|...|+++++. .|.++. +++.-...|.-.++.++|....++++.. .+..+..+ ..++
T Consensus 55 ~A~~~~~~al~~-----~~~~~~----~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~----- 120 (252)
T 2ho1_A 55 QAKVPLRKALEI-----DPSSAD----AHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKR----- 120 (252)
T ss_dssp GGHHHHHHHHHH-----CTTCHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHhc-----CCChHH----HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhH-----
Confidence 456666666653 233331 2222233445688999999988887653 22333333 1222
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh----------
Q psy5989 88 FPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASR---------- 157 (220)
Q Consensus 88 ~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld---------- 157 (220)
.+.|...|++++. .|.+|.......+.+..++. .++.++|+...++++...-...+
T Consensus 121 -------~~~A~~~~~~~~~------~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 186 (252)
T 2ho1_A 121 -------YEEAYQRLLEASQ------DTLYPERSRVFENLGLVSLQ-MKKPAQAKEYFEKSLRLNRNQPSVALEMADLLY 186 (252)
T ss_dssp -------HHHHHHHHHHHTT------CTTCTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHh------CccCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHH
Confidence 2566677776654 34556555556666666655 68999999888887653211111
Q ss_pred --hhhhhhhHHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhcC
Q psy5989 158 --DTKRSVCLLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTETG 209 (220)
Q Consensus 158 --~~~~d~~lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~~ 209 (220)
.-+.++...++...... -...+-+..++.+.....+|++-....+++.+..
T Consensus 187 ~~g~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~ 239 (252)
T 2ho1_A 187 KEREYVPARQYYDLFAQGG-GQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLY 239 (252)
T ss_dssp HTTCHHHHHHHHHHHHTTS-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HcCCHHHHHHHHHHHHHhC-cCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC
Confidence 11233322222222221 1334456677777778888998888888876643
No 46
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=92.05 E-value=1.8 Score=36.15 Aligned_cols=119 Identities=14% Similarity=0.042 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------------HHHHHHHhcC-C
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------------YFCFYFFLMN-D 81 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------------~~~~~~~~~~-~ 81 (220)
+.|..+|++|.++... +. +|...+.+++----.|.-++++++|+..-++|+.- .+..+..+-. +
T Consensus 53 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~g 129 (307)
T 2ifu_A 53 EQAKDAYLQEAEAHAN-NR--SLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEPL 129 (307)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHH-cC--CHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHcC
Confidence 5778888999888753 32 34444445554445666778888888888777643 2333444421 2
Q ss_pred CCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcch-hcccchhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy5989 82 PEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIR-LGLALNFSVFYYEIINSPARACHLAKQVKYSC 152 (220)
Q Consensus 82 ~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~Pir-LGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeA 152 (220)
+ .++|...|++|+++... ..+|.. .....|.+..|.. +++.++|+..-+++..-.
T Consensus 130 ~------------~~~A~~~~~~Al~~~~~---~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 130 D------------LSKAVHLYQQAAAVFEN---EERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSMY 185 (307)
T ss_dssp C------------HHHHHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred C------------HHHHHHHHHHHHHHHHh---CCChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 2 37899999999998764 122333 3344566766665 799999999888887654
No 47
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=92.04 E-value=1.1 Score=37.23 Aligned_cols=111 Identities=11% Similarity=0.129 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------H-HHHHHHHhcCCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------H-YFCFYFFLMNDPEFSP 86 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d-~~~~~~~~~~~~e~~~ 86 (220)
.+.|...|++|+. .+.|.++ .+-+++..|+ +-.++.++|..+-++|+. + .+..+..+..
T Consensus 80 ~~~A~~~~~rAl~----~~~p~~~---~~~~~~~~~~-~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~------ 145 (308)
T 2ond_A 80 SDEAANIYERAIS----TLLKKNM---LLYFAYADYE-ESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR------ 145 (308)
T ss_dssp HHHHHHHHHHHHT----TTTTTCH---HHHHHHHHHH-HHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHH------
T ss_pred hHHHHHHHHHHHH----HhCcccH---HHHHHHHHHH-HhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHH------
Confidence 5667777777764 1344443 2334444443 445667777766666653 2 3333333311
Q ss_pred CccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 87 LFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 87 ~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+..-.+.|...|++|++ +.|.+ ..+.+..+.+.+...+++++|+.+-++|+.
T Consensus 146 ----~~~~~~~A~~~~~~a~~-----~~p~~---~~~~~~~a~~~~~~~~~~~~A~~~~~~al~ 197 (308)
T 2ond_A 146 ----RAEGIKSGRMIFKKARE-----DARTR---HHVYVTAALMEYYCSKDKSVAFKIFELGLK 197 (308)
T ss_dssp ----HHHCHHHHHHHHHHHHT-----STTCC---THHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred ----HhcCHHHHHHHHHHHHh-----cCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 11123556666666653 22322 222334444444445666666666666644
No 48
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=91.70 E-value=3.9 Score=32.21 Aligned_cols=120 Identities=14% Similarity=0.060 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHhcCCC-CCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFLMNDP-EFSP 86 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~~~~~-e~~~ 86 (220)
.+.|...|++|+. +.|.+|.- ..|.+. .|.-.++.++|....++++. ..+..+..+.... ....
T Consensus 21 ~~~A~~~~~~al~-----~~p~~~~a---~~~lg~-~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~ 91 (217)
T 2pl2_A 21 YDAALTLFERALK-----ENPQDPEA---LYWLAR-TQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAE 91 (217)
T ss_dssp HHHHHHHHHHHHT-----TSSSCHHH---HHHHHH-HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHH-----hCCCCHHH---HHHHHH-HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhh
Confidence 3466677776653 55666542 222322 34568899999998888764 2333333331110 0000
Q ss_pred CccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHH
Q psy5989 87 LFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYS 151 (220)
Q Consensus 87 ~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afde 151 (220)
.......-.+.|...|++|+++ .|.+|. ..+|.+..++. .++.++|+..-++|+.-
T Consensus 92 ~~~~~~g~~~~A~~~~~~al~~-----~P~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 147 (217)
T 2pl2_A 92 DRERGKGYLEQALSVLKDAERV-----NPRYAP---LHLQRGLVYAL-LGERDKAEASLKQALAL 147 (217)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred hhcccccCHHHHHHHHHHHHHh-----CcccHH---HHHHHHHHHHH-cCChHHHHHHHHHHHhc
Confidence 0000113456788888888753 566653 33556665555 78999988887777654
No 49
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=91.67 E-value=4.3 Score=32.41 Aligned_cols=122 Identities=11% Similarity=0.041 Sum_probs=70.7
Q ss_pred HHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCC-cchh
Q psy5989 51 YEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTH-PIRL 121 (220)
Q Consensus 51 yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~-PirL 121 (220)
|.-.++.++|....++++. ..+..+..+ ..++ .+.|...|++++++....-.+.+ |...
T Consensus 169 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~------------~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 236 (330)
T 3hym_B 169 YGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGE------------WKTAEKWFLDALEKIKAIGNEVTVDKWE 236 (330)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHHTTTSCSCTTTTCC
T ss_pred HHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccc------------HHHHHHHHHHHHHHhhhccccccccHHH
Confidence 4457778888877777664 233333333 2222 26788999999988754333222 2223
Q ss_pred cccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHH
Q psy5989 122 GLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAA 201 (220)
Q Consensus 122 GL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~ 201 (220)
....+.+..++. .++.++|+...++++...- + .-+-+..++.+..+..+|++-+..
T Consensus 237 ~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~~--------~---------------~~~~~~~la~~~~~~g~~~~A~~~ 292 (330)
T 3hym_B 237 PLLNNLGHVCRK-LKKYAEALDYHRQALVLIP--------Q---------------NASTYSAIGYIHSLMGNFENAVDY 292 (330)
T ss_dssp HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHST--------T---------------CSHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCHHHHHHHHHHHHhhCc--------c---------------chHHHHHHHHHHHHhccHHHHHHH
Confidence 344455555544 7888888877777664310 0 112344556666666777777777
Q ss_pred HHHhHhc
Q psy5989 202 MKAVTET 208 (220)
Q Consensus 202 ~~~~~~~ 208 (220)
.+++++.
T Consensus 293 ~~~al~~ 299 (330)
T 3hym_B 293 FHTALGL 299 (330)
T ss_dssp HHTTTTT
T ss_pred HHHHHcc
Confidence 6666553
No 50
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=91.55 E-value=3.4 Score=30.98 Aligned_cols=166 Identities=13% Similarity=0.080 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cC-CCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MN-DPEF 84 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~-~~e~ 84 (220)
.+.|...|+.++++ .|.+|. +++.-...|.-.++.++|....++++. ..+..+..+ .. ++
T Consensus 24 ~~~A~~~~~~~~~~-----~~~~~~----~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~-- 92 (225)
T 2vq2_A 24 YRQATASIEDALKS-----DPKNEL----AWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNR-- 92 (225)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCC--
T ss_pred HHHHHHHHHHHHHh-----CccchH----HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCc--
Confidence 45677777777653 343332 222223345568899999998888764 233334444 22 22
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh-------
Q psy5989 85 SPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASR------- 157 (220)
Q Consensus 85 ~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld------- 157 (220)
.+.|...|+++++ .|.+|.......+.+..+.. .++.++|+...++++...-...+
T Consensus 93 ----------~~~A~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 155 (225)
T 2vq2_A 93 ----------PAESMAYFDKALA------DPTYPTPYIANLNKGICSAK-QGQFGLAEAYLKRSLAAQPQFPPAFKELAR 155 (225)
T ss_dssp ----------HHHHHHHHHHHHT------STTCSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHc------CcCCcchHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCchHHHHHHH
Confidence 2677888888764 35666666666666666655 78999998888777653211111
Q ss_pred -----hhhhhhhHHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHh
Q psy5989 158 -----DTKRSVCLLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTE 207 (220)
Q Consensus 158 -----~~~~d~~lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~ 207 (220)
.-+.++...++...........+-+..++.+..+..++++...+.+++.+
T Consensus 156 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 210 (225)
T 2vq2_A 156 TKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQA 210 (225)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 11233322222222221112233345556666667777777777776654
No 51
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=91.51 E-value=3 Score=32.72 Aligned_cols=30 Identities=17% Similarity=-0.083 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhHhcC
Q psy5989 180 EELVQRAKLAEQAERYDDMAAAMKAVTETG 209 (220)
Q Consensus 180 ~~~~~~akl~eq~ery~~m~~~~~~~~~~~ 209 (220)
+-+..++.+-.+..+|++-..+.+++++..
T Consensus 222 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 251 (272)
T 3u4t_A 222 EANEYIAYYYTINRDKVKADAAWKNILALD 251 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 345557888888899999999988887643
No 52
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=90.94 E-value=0.56 Score=43.82 Aligned_cols=72 Identities=11% Similarity=0.084 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHH
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMNDPEFSPLFPCSLA 93 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~~e~~~~~~~k~~ 93 (220)
-+.|..-|++|+++-...++|.||--+....|.++-|+. .|..
T Consensus 367 ~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~---------------------------~G~~---------- 409 (490)
T 3n71_A 367 YEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWH---------------------------AGHI---------- 409 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH---------------------------TTCH----------
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------------------------CCCH----------
Confidence 357889999999999999999999977777777665542 2222
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcchhccc
Q psy5989 94 VVEDSQKAYQEAFDIAKSKMQPTHPIRLGLA 124 (220)
Q Consensus 94 ~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~ 124 (220)
+.|...|++|++|-+..+.|.||.-.-+.
T Consensus 410 --~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~ 438 (490)
T 3n71_A 410 --EVGHGMICKAYAILLVTHGPSHPITKDLE 438 (490)
T ss_dssp --HHHHHHHHHHHHHHHHHTCTTSHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 77888999999999889999999766544
No 53
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=90.78 E-value=3.8 Score=32.97 Aligned_cols=84 Identities=17% Similarity=0.200 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhc-ccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhccc
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLG-LALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMS 174 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLG-L~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s 174 (220)
+.|...|++++++ .|.+|.... +..+.+..++. .++.++|+...++++.. + .
T Consensus 251 ~~A~~~~~~~~~~-----~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~-----~---~------------- 303 (359)
T 3ieg_A 251 TDATSKYESVMKT-----EPSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM-----E---P------------- 303 (359)
T ss_dssp HHHHHHHHHHHHH-----CCSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH-----C---T-------------
T ss_pred HHHHHHHHHHHhc-----CCCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh-----C---c-------------
Confidence 6677777777653 366665433 33445555444 78888888777766543 1 0
Q ss_pred ccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 175 SSGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 175 ~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
..-+-+..++.+..+..+|++-....+++++.
T Consensus 304 --~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~ 335 (359)
T 3ieg_A 304 --DNVNALKDRAEAYLIEEMYDEAIQDYEAAQEH 335 (359)
T ss_dssp --TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred --ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 11124455666666667777777777776654
No 54
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=90.74 E-value=1.6 Score=36.39 Aligned_cols=115 Identities=14% Similarity=0.023 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccc-hhHHHHHhhcChHHHHHHHHHHHHHH------------HHHHHHh--c
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHPIRLGLALN-FSVFYYEILNSPDKACQLAKQVCAHY------------FCFYFFL--M 79 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN-~SVF~yEIl~~~~~A~~lAk~A~~d~------------~~~~~~~--~ 79 (220)
+.|...|++|+++... .-+|...+.+++ .+..| +- +++++|+..-++|+.-. +..+..+ .
T Consensus 93 ~~A~~~~~~Al~l~~~---~g~~~~~a~~~~~lg~~~-~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~ 167 (307)
T 2ifu_A 93 PEAVQYIEKASVMYVE---NGTPDTAAMALDRAGKLM-EP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVR 167 (307)
T ss_dssp GGGHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHH-TT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHH-Hc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHH
Confidence 4678889999988753 234444444443 34444 44 99999999888887532 3333333 2
Q ss_pred CCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHH
Q psy5989 80 NDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVK 149 (220)
Q Consensus 80 ~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Af 149 (220)
.++. +.|...|++|+++.... +. +| ..+.++.--...|--++++++|+..-+++.
T Consensus 168 ~g~~------------~~A~~~~~~al~~~~~~-~~-~~-~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 168 QQKF------------DEAAASLQKEKSMYKEM-EN-YP-TCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp TTCH------------HHHHHHHHHHHHHHHHT-TC-HH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCCH------------HHHHHHHHHHHHHHHHc-CC-hh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 2333 78899999999987642 11 22 222222223334445688888776554443
No 55
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=90.50 E-value=2.2 Score=35.48 Aligned_cols=109 Identities=11% Similarity=0.164 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHh------hcCh-------HHHHHHHHHHHHH-------HH
Q psy5989 13 VVDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEI------LNSP-------DKACQLAKQVCAH-------YF 72 (220)
Q Consensus 13 ~~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEI------l~~~-------~~A~~lAk~A~~d-------~~ 72 (220)
..++|...|++|+.+. |.+ ..+-+|+..++... .++. ++|..+-++|+.. ++
T Consensus 31 ~~~~a~~~~~~al~~~-----p~~---~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~ 102 (308)
T 2ond_A 31 ITKRVMFAYEQCLLVL-----GHH---PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLY 102 (308)
T ss_dssp HHHHHHHHHHHHHHHH-----TTC---HHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHH
T ss_pred HHHHHHHHHHHHHHHc-----CCC---HHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHH
Confidence 3478899999998742 333 44556777777654 5775 7888888887762 33
Q ss_pred HHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHH
Q psy5989 73 CFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVK 149 (220)
Q Consensus 73 ~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Af 149 (220)
..+..+ ..++ .+.|...|++|+. ++|.+|.. +.+|+..|+.. .++.++|+.+-++|.
T Consensus 103 ~~~~~~~~~~~~------------~~~A~~~~~~al~-----~~p~~~~~--~~~~~~~~~~~-~~~~~~A~~~~~~a~ 161 (308)
T 2ond_A 103 FAYADYEESRMK------------YEKVHSIYNRLLA-----IEDIDPTL--VYIQYMKFARR-AEGIKSGRMIFKKAR 161 (308)
T ss_dssp HHHHHHHHHTTC------------HHHHHHHHHHHHT-----SSSSCTHH--HHHHHHHHHHH-HHCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC------------HHHHHHHHHHHHh-----ccccCccH--HHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 333333 1222 3788999999984 67877742 55677877766 577777765555543
No 56
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=90.39 E-value=4.9 Score=32.91 Aligned_cols=97 Identities=11% Similarity=0.138 Sum_probs=50.7
Q ss_pred cCCCCCcccccc-ccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHH
Q psy5989 31 KMQPTHPIRLGL-ALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKA 101 (220)
Q Consensus 31 ~L~pt~PirLGL-aLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~a 101 (220)
.+.|.+|..-.- .++.+.. |--.++.++|....++++. ..+..+..+ ..++. +.|...
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~------------~~A~~~ 120 (368)
T 1fch_A 54 QFEEENPLRDHPQPFEEGLR-RLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQE------------LLAISA 120 (368)
T ss_dssp CCCSSCTTTTCSSHHHHHHH-HHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCH------------HHHHHH
T ss_pred hcCCCCcccchHHHHHHHHH-HHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCH------------HHHHHH
Confidence 466777754222 2333333 3456788888888877764 233333333 22222 567777
Q ss_pred HHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHH
Q psy5989 102 YQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVK 149 (220)
Q Consensus 102 Yq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Af 149 (220)
|++++++ .|.+|. ...+.+.. |.-.++.++|+...++++
T Consensus 121 ~~~al~~-----~~~~~~---~~~~l~~~-~~~~g~~~~A~~~~~~~~ 159 (368)
T 1fch_A 121 LRRCLEL-----KPDNQT---ALMALAVS-FTNESLQRQACEILRDWL 159 (368)
T ss_dssp HHHHHHH-----CTTCHH---HHHHHHHH-HHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhc-----CCCCHH---HHHHHHHH-HHHcCCHHHHHHHHHHHH
Confidence 7777653 344433 22223332 233567777666666554
No 57
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=90.33 E-value=0.45 Score=43.46 Aligned_cols=74 Identities=16% Similarity=0.160 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHH
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFCFYFFLMNDPEFSPLFPCSLA 93 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~~~~~~~~~~e~~~~~~~k~~ 93 (220)
-+.|..-|++++++-+..++|.||.......|..+-|.. .|..
T Consensus 345 ~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~---------------------------~g~~---------- 387 (429)
T 3qwp_A 345 LEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH---------------------------QGMF---------- 387 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH---------------------------TTCH----------
T ss_pred HHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh---------------------------cCCH----------
Confidence 467889999999999999999999987777777665553 2222
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcchhcccch
Q psy5989 94 VVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALN 126 (220)
Q Consensus 94 ~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN 126 (220)
+.|...|++|++|-+..+.|.||.-.-+.-|
T Consensus 388 --~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~ 418 (429)
T 3qwp_A 388 --PQAMKNLRLAFDIMRVTHGREHSLIEDLILL 418 (429)
T ss_dssp --HHHHHHHHHHHHHHHHHTCTTSHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 6788889999998888899999976644433
No 58
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=89.84 E-value=5.8 Score=30.86 Aligned_cols=111 Identities=16% Similarity=0.085 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~ 85 (220)
.+.|...|+++++.. +..+|-......+.+. .|--.++.++|....++++. ..+..+..+ ..++
T Consensus 21 ~~~A~~~~~~~~~~~----~~~~~~~~~~~~~l~~-~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~--- 92 (275)
T 1xnf_A 21 QEVILARMEQILASR----ALTDDERAQLLYERGV-LYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN--- 92 (275)
T ss_dssp HHHHHHHHHHHHTSS----CCCHHHHHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHhcc----cccCchhHHHHHHHHH-HHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccC---
Confidence 567777777776531 2223333333333333 33456788888888887763 334444444 2222
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
.+.|...|++|+++ .|.+|. ...+.+..++. +++.++|+...++++.
T Consensus 93 ---------~~~A~~~~~~al~~-----~~~~~~---~~~~la~~~~~-~g~~~~A~~~~~~a~~ 139 (275)
T 1xnf_A 93 ---------FDAAYEAFDSVLEL-----DPTYNY---AHLNRGIALYY-GGRDKLAQDDLLAFYQ 139 (275)
T ss_dssp ---------HHHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHhc-----CccccH---HHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 26777778877754 344432 22334444444 6788887777776653
No 59
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=89.80 E-value=5.5 Score=30.49 Aligned_cols=54 Identities=11% Similarity=0.070 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA 69 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~ 69 (220)
.+.|...|+.++++... .+|.+|.......+. .-.|.-+++.++|...-++++.
T Consensus 54 ~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~~l-~~~~~~~~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 54 YETAISTLNDAVEQGRE-MRADYKVISKSFARI-GNAYHKLGDLKKTIEYYQKSLT 107 (258)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHH-HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcc-cccchHHHHHHHHHH-HHHHHHcccHHHHHHHHHHHHh
Confidence 45778888888887643 344443322222333 3344567888999888887766
No 60
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=89.67 E-value=6.6 Score=31.21 Aligned_cols=119 Identities=12% Similarity=0.022 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH---------HHHHHHHhc-C-CCCC
Q psy5989 16 DSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH---------YFCFYFFLM-N-DPEF 84 (220)
Q Consensus 16 ~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d---------~~~~~~~~~-~-~~e~ 84 (220)
.|...|+.++ ...|.+|......++.+. .|--+++.++|+..-++++.. .+..+..+. . ++.
T Consensus 33 ~A~~~~~~~l-----~~~p~~~~~~~a~~~lg~-~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~- 105 (261)
T 3qky_A 33 RAIEYFKAVF-----TYGRTHEWAADAQFYLAR-AYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPP- 105 (261)
T ss_dssp HHHHHHHHHG-----GGCSCSTTHHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCC-
T ss_pred HHHHHHHHHH-----HhCCCCcchHHHHHHHHH-HHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhccc-
Confidence 4444444443 245777654333333333 344578999999988887753 223333331 1 110
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhccc--------------chhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 85 SPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLA--------------LNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 85 ~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~--------------LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
......-.+.|...|+++++ +.|.+|...... ++.+..|+. .++.++|+..-++++.
T Consensus 106 ---~~~~~~~~~~A~~~~~~~l~-----~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~ 176 (261)
T 3qky_A 106 ---YELDQTDTRKAIEAFQLFID-----RYPNHELVDDATQKIRELRAKLARKQYEAARLYER-RELYEAAAVTYEAVFD 176 (261)
T ss_dssp ---TTSCCHHHHHHHHHHHHHHH-----HCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred ---ccccchhHHHHHHHHHHHHH-----HCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 00013445788888888875 357776554333 555666555 6888777766655543
No 61
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=89.50 E-value=5.6 Score=32.93 Aligned_cols=108 Identities=15% Similarity=0.161 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCC--CccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPT--HPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPE 83 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt--~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e 83 (220)
.+.|...|++++++ .|. +|. ...|.+.. |.-.++.++|....++++. ..+..+..+ ..++.
T Consensus 193 ~~~A~~~~~~al~~-----~p~~~~~~---~~~~l~~~-~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 263 (365)
T 4eqf_A 193 LEGVKELYLEAAHQ-----NGDMIDPD---LQTGLGVL-FHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRS 263 (365)
T ss_dssp HHHHHHHHHHHHHH-----SCSSCCHH---HHHHHHHH-HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHh-----CcCccCHH---HHHHHHHH-HHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 56788888888764 344 332 22334443 4457899999999888864 234444444 22222
Q ss_pred CCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHH
Q psy5989 84 FSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYS 151 (220)
Q Consensus 84 ~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afde 151 (220)
+.|...|++++++ .|.+| ....|.+..++. +++.++|+..-++++.-
T Consensus 264 ------------~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 310 (365)
T 4eqf_A 264 ------------EEAVEAYTRALEI-----QPGFI---RSRYNLGISCIN-LGAYREAVSNFLTALSL 310 (365)
T ss_dssp ------------HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCCHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHHHhc-----CCCch---HHHHHHHHHHHH-CCCHHHHHHHHHHHHHh
Confidence 7888999998865 35443 334455555554 68999988877777653
No 62
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=89.42 E-value=7.2 Score=35.66 Aligned_cols=64 Identities=5% Similarity=-0.082 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhh
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTK 160 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~ 160 (220)
+.|...|++++++.++-|.|.||-.+...-|.+.-|.. .++.++|..+.++++.---..+-.-.
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~lG~~H 378 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSKHYPVYS 378 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 67899999999999999999999999888888777666 79999999999998765554444333
No 63
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=89.34 E-value=5.4 Score=29.80 Aligned_cols=107 Identities=14% Similarity=0.085 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhh-cChHHHHHHHHHHHH--------HHHHHHHHh--cCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEIL-NSPDKACQLAKQVCA--------HYFCFYFFL--MNDP 82 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl-~~~~~A~~lAk~A~~--------d~~~~~~~~--~~~~ 82 (220)
.+.|...|+.++++ .|.++. ...+.+. .|.-. ++.++|....++++. ..+..+..+ ..++
T Consensus 58 ~~~A~~~~~~a~~~-----~~~~~~---~~~~l~~-~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 128 (225)
T 2vq2_A 58 NDKAQESFRQALSI-----KPDSAE---INNNYGW-FLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQ 128 (225)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHHH-HHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHh-----CCCChH---HHHHHHH-HHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCC
Confidence 35677777777654 344432 2223333 34456 999999999988876 333333333 2222
Q ss_pred CCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 83 EFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 83 e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
.+.|...|+++++. .|.+|. ...+.+..++. .++.++|+...++++.
T Consensus 129 ------------~~~A~~~~~~~~~~-----~~~~~~---~~~~la~~~~~-~~~~~~A~~~~~~~~~ 175 (225)
T 2vq2_A 129 ------------FGLAEAYLKRSLAA-----QPQFPP---AFKELARTKML-AGQLGDADYYFKKYQS 175 (225)
T ss_dssp ------------HHHHHHHHHHHHHH-----STTCHH---HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHHHHHh-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 26778888888754 355443 23344444444 7899999888777665
No 64
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=89.13 E-value=3.4 Score=40.24 Aligned_cols=107 Identities=12% Similarity=0.135 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~ 85 (220)
.++|...|++|+++ .|.++. ...|.+.- |.-+++.++|...-++|+. +.+..+..+ ..++.
T Consensus 25 ~~eAi~~~~kAl~l-----~P~~~~---a~~nLg~~-l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~-- 93 (723)
T 4gyw_A 25 IEEAVRLYRKALEV-----FPEFAA---AHSNLASV-LQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDV-- 93 (723)
T ss_dssp HHHHHHHHHHHHHH-----CSCCHH---HHHHHHHH-HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH--
T ss_pred HHHHHHHHHHHHHh-----CCCCHH---HHHHHHHH-HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH--
Confidence 56889999999874 455543 22344443 3457889999988888764 455555555 22333
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|.++|++|+++ .|.++ ....|.+.-|.+ +++.++|+..-++|+.
T Consensus 94 ----------~~A~~~~~kAl~l-----~P~~~---~a~~~Lg~~~~~-~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 94 ----------QGALQCYTRAIQI-----NPAFA---DAHSNLASIHKD-SGNIPEAIASYRTALK 139 (723)
T ss_dssp ----------HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 7889999999864 45554 344566666665 6888888877776653
No 65
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=89.07 E-value=11 Score=32.74 Aligned_cols=113 Identities=9% Similarity=0.082 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCCC
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFSP 86 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~~ 86 (220)
+.|...|++++.+ .|.+|. ...+.+ ..|.-.++.++|....++++.. .+..+..+ ..++
T Consensus 327 ~~A~~~~~~a~~~-----~~~~~~---~~~~la-~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---- 393 (537)
T 3fp2_A 327 KNAKEDFQKAQSL-----NPENVY---PYIQLA-CLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGD---- 393 (537)
T ss_dssp HHHHHHHHHHHHH-----CTTCSH---HHHHHH-HHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHH-HHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC----
Confidence 4566666666653 344442 122222 3344678888888888877653 44444444 2222
Q ss_pred CccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHh---------cChHHHHHHHHHHHH
Q psy5989 87 LFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEII---------NSPARACHLAKQVKY 150 (220)
Q Consensus 87 ~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl---------~~~~~A~~iAk~Afd 150 (220)
.+.|...|++++++.... +.-...+|..++.+..+...- ++.++|+...++++.
T Consensus 394 --------~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 456 (537)
T 3fp2_A 394 --------FDTAIKQYDIAKRLEEVQ--EKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACE 456 (537)
T ss_dssp --------HHHHHHHHHHHHHHHHHC--SSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHcCCcc--hhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHH
Confidence 278899999998876431 222234454555555544421 777777777666654
No 66
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=88.85 E-value=9.1 Score=34.60 Aligned_cols=143 Identities=13% Similarity=0.040 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~ 85 (220)
.+.|...|++|+++ .|.++- ...+.+.- |.-.++.++|....++|+. ..+..+..+ ..++.
T Consensus 5 ~~~A~~~~~~al~~-----~p~~~~---~~~~lg~~-~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~-- 73 (568)
T 2vsy_A 5 GPRELLQLRAAVRH-----RPQDFV---AWLMLADA-ELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRH-- 73 (568)
T ss_dssp ---------------------CCHH---HHHHHHHH-HHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCH--
T ss_pred HHHHHHHHHHHHHh-----CCCCHH---HHHHHHHH-HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCH--
Confidence 35677778777653 344432 22333333 3456889999999888864 344444444 22222
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhH
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCL 165 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~l 165 (220)
+.|...|++|+++ .|.++- ...|.+.-++. .++.++|+..-++++... .
T Consensus 74 ----------~~A~~~~~~al~~-----~p~~~~---~~~~la~~~~~-~g~~~~A~~~~~~al~~~-----p------- 122 (568)
T 2vsy_A 74 ----------AEAAVLLQQASDA-----APEHPG---IALWLGHALED-AGQAEAAAAAYTRAHQLL-----P------- 122 (568)
T ss_dssp ----------HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHC-----T-------
T ss_pred ----------HHHHHHHHHHHhc-----CCCCHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC-----C-------
Confidence 7888899988864 455543 33455555544 688888877666654321 0
Q ss_pred HHHHhhcccccchhHHHHHHHHHHHHH---hhHHHHHHHHHHhHhcC
Q psy5989 166 LCEIFHTMSSSGEKEELVQRAKLAEQA---ERYDDMAAAMKAVTETG 209 (220)
Q Consensus 166 ilq~L~~~s~~s~r~~~~~~akl~eq~---ery~~m~~~~~~~~~~~ 209 (220)
...+-+..++.+..+. .+|++....+++.++.+
T Consensus 123 -----------~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~ 158 (568)
T 2vsy_A 123 -----------EEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQG 158 (568)
T ss_dssp -----------TCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHT
T ss_pred -----------CCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcC
Confidence 1112334455555555 77777777777766654
No 67
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=88.42 E-value=5.9 Score=30.68 Aligned_cols=107 Identities=10% Similarity=0.135 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH--------HHHHHHHHh--cCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA--------HYFCFYFFL--MNDPE 83 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~--------d~~~~~~~~--~~~~e 83 (220)
.+.|...|+++++. .|.++. ...+.+. .|.-.++.++|....++++. ..+..+..+ ..++
T Consensus 87 ~~~A~~~~~~a~~~-----~~~~~~---~~~~la~-~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~- 156 (252)
T 2ho1_A 87 PKLADEEYRKALAS-----DSRNAR---VLNNYGG-FLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKK- 156 (252)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHHH-HHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHH-----CcCcHH---HHHHHHH-HHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCC-
Confidence 35677777777654 333332 2233333 34568899999999888876 222333333 2222
Q ss_pred CCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 84 FSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 84 ~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
.+.|...|+++++. .|.+|. ...+.+..++. .++.++|....++++.
T Consensus 157 -----------~~~A~~~~~~~~~~-----~~~~~~---~~~~la~~~~~-~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 157 -----------PAQAKEYFEKSLRL-----NRNQPS---VALEMADLLYK-EREYVPARQYYDLFAQ 203 (252)
T ss_dssp -----------HHHHHHHHHHHHHH-----CSCCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred -----------HHHHHHHHHHHHhc-----CcccHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 26788888888754 344432 23444444444 6888888877766543
No 68
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=88.37 E-value=2.7 Score=30.56 Aligned_cols=52 Identities=6% Similarity=0.030 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVK 149 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Af 149 (220)
+.|...|++|+++... .++.++.+-....|.+..+ .-+++.++|+..-++|+
T Consensus 59 ~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 59 AECVQFCEKAVEVGRE-TRADYKLIAKAMSRAGNAF-QKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcc-cchhhHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHH
Confidence 5677777777776542 3344443323334445444 44789888887655554
No 69
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=88.29 E-value=7.1 Score=29.83 Aligned_cols=84 Identities=8% Similarity=0.007 Sum_probs=51.2
Q ss_pred hhcChHHHHHHHHHHHH-----HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccc
Q psy5989 53 ILNSPDKACQLAKQVCA-----HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLAL 125 (220)
Q Consensus 53 Il~~~~~A~~lAk~A~~-----d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~L 125 (220)
-.++.++|....++++. +.+..+..+ ..++. +.|...|++++++... .+|.+|.......
T Consensus 17 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~------------~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~ 83 (258)
T 3uq3_A 17 KARQFDEAIEHYNKAWELHKDITYLNNRAAAEYEKGEY------------ETAISTLNDAVEQGRE-MRADYKVISKSFA 83 (258)
T ss_dssp HTTCHHHHHHHHHHHHHHSCCTHHHHHHHHHHHHTTCH------------HHHHHHHHHHHHHHHH-TTCCHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhhccHHHHHHHHHHHHHcccH------------HHHHHHHHHHHHhCcc-cccchHHHHHHHH
Confidence 45677777777776654 233333333 22222 7788888888887653 3444444344444
Q ss_pred hhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 126 NFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 126 N~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.+..+. -+++.++|+..-++++.
T Consensus 84 ~l~~~~~-~~~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 84 RIGNAYH-KLGDLKKTIEYYQKSLT 107 (258)
T ss_dssp HHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHH-HcccHHHHHHHHHHHHh
Confidence 5555444 47888998888877766
No 70
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.23 E-value=5.6 Score=33.73 Aligned_cols=124 Identities=11% Similarity=0.017 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHH------------HHHHHHh--c
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHY------------FCFYFFL--M 79 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~------------~~~~~~~--~ 79 (220)
.+.+...|+.+.+++... ..++.|..+..|.+-.|+ -.++.++|..+-+++.... +..+..+ .
T Consensus 111 ~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~~-~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (434)
T 4b4t_Q 111 LDDQIFVCEKSIEFAKRE--KRVFLKHSLSIKLATLHY-QKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHK 187 (434)
T ss_dssp HHHHHHHHHHHHHHHHHS--SCCSSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh--CccHHHHHHHHHHHHHHH-HccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 356778888898888653 445667777777766555 4688899988877765321 1111111 1
Q ss_pred CCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHH
Q psy5989 80 NDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIG 154 (220)
Q Consensus 80 ~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~ 154 (220)
.++ .++|...|++|..++.. . +..|.-.|...+..--+|...++.++|+..-.++|+..-.
T Consensus 188 ~~~------------~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~ 248 (434)
T 4b4t_Q 188 LRN------------LAKSKASLTAARTAANS-I-YCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHN 248 (434)
T ss_dssp TTC------------HHHHHHHHHHHHHHHHH-S-CCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred hCc------------HHHHHHHHHHHHHHhhc-C-CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 122 36889999999988764 2 2223334566666666667788999999988888775443
No 71
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=87.86 E-value=7.9 Score=29.86 Aligned_cols=167 Identities=6% Similarity=-0.042 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~ 85 (220)
-+.|...|++|+++. |+.++ ....| --..|.-+++.++|....++|+. ..+..+..+ ..++.
T Consensus 23 ~~~A~~~~~~al~~~----~~~~~---~~~~~-~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~-- 92 (228)
T 4i17_A 23 YAVAFEKYSEYLKLT----NNQDS---VTAYN-CGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNN-- 92 (228)
T ss_dssp HHHHHHHHHHHHHHT----TTCCH---HHHHH-HHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCH--
T ss_pred HHHHHHHHHHHHhcc----CCCCc---HHHHH-HHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccH--
Confidence 457788888887653 22444 22233 34455678999999999888864 334444444 22232
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcch---hc-ccchhHHHHHHHhcChHHHHHHHHHHHHHHHH-------
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIR---LG-LALNFSVFYYEIINSPARACHLAKQVKYSCIG------- 154 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~Pir---LG-L~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~------- 154 (220)
+.|...|++++++ .|.+|.. ++ ...+.+..++. +++.++|+..-++|+...-.
T Consensus 93 ----------~~A~~~~~~al~~-----~p~~~~~~~~~~~~~~~~g~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~ 156 (228)
T 4i17_A 93 ----------QEYIATLTEGIKA-----VPGNATIEKLYAIYYLKEGQKFQQ-AGNIEKAEENYKHATDVTSKKWKTDAL 156 (228)
T ss_dssp ----------HHHHHHHHHHHHH-----STTCHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHH-----CCCcHHHHHHHHHHHHHHhHHHHH-hccHHHHHHHHHHHHhcCCCcccHHHH
Confidence 7888889888853 5777732 11 22334444444 68989988887777542111
Q ss_pred -hhhhhhhhh-hHHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhcC
Q psy5989 155 -ASRDTKRSV-CLLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTETG 209 (220)
Q Consensus 155 -eld~~~~d~-~lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~~ 209 (220)
.+-..+-+. ..+++. ...+.......+........+.|++-....++.++..
T Consensus 157 ~~l~~~~~~~~~~~~~~---a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~ 210 (228)
T 4i17_A 157 YSLGVLFYNNGADVLRK---ATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLS 210 (228)
T ss_dssp HHHHHHHHHHHHHHHHH---HGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHH---HHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 111111100 011111 1111111223344444555677888888888877653
No 72
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=87.80 E-value=9 Score=30.44 Aligned_cols=169 Identities=10% Similarity=0.128 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHH---hhcChHHHHHHHHHHHH----HHHHHHHHhc-CCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYE---ILNSPDKACQLAKQVCA----HYFCFYFFLM-NDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yE---Il~~~~~A~~lAk~A~~----d~~~~~~~~~-~~~e~~ 85 (220)
.++|...|++|.+ |.+|. ...|....|+. +.++.++|...-++|.. ..+..+..+- .+..
T Consensus 22 ~~~A~~~~~~a~~-------~~~~~---a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~-- 89 (273)
T 1ouv_A 22 FTQAKKYFEKACD-------LKENS---GCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQG-- 89 (273)
T ss_dssp HHHHHHHHHHHHH-------TTCHH---HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSS--
T ss_pred HHHHHHHHHHHHH-------CCCHH---HHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCCC--
Confidence 4567777777765 33332 22334444443 37888999888887753 3344444441 1100
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHH---HhcChHHHHHHHHHHHHHH----HHhhhh
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYE---IINSPARACHLAKQVKYSC----IGASRD 158 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yE---Il~~~~~A~~iAk~AfdeA----i~eld~ 158 (220)
-..-.++|...|++|++. .+| ....|.+..|.. +.+++++|+..-++|.+.. ...+-.
T Consensus 90 -----~~~~~~~A~~~~~~a~~~-------~~~---~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~ 154 (273)
T 1ouv_A 90 -----VSQNTNKALQYYSKACDL-------KYA---EGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGS 154 (273)
T ss_dssp -----SCCCHHHHHHHHHHHHHT-------TCH---HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred -----cccCHHHHHHHHHHHHHc-------CCc---cHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 011136788888888753 122 233455666555 3688888888877776522 111111
Q ss_pred hh-------hhhhHHHHHhhcccccchhHHHHHHHHHHHH----HhhHHHHHHHHHHhHhcC
Q psy5989 159 TK-------RSVCLLCEIFHTMSSSGEKEELVQRAKLAEQ----AERYDDMAAAMKAVTETG 209 (220)
Q Consensus 159 ~~-------~d~~lilq~L~~~s~~s~r~~~~~~akl~eq----~ery~~m~~~~~~~~~~~ 209 (220)
.+ .|-..-+..++.-.....-+-...++.+-.+ ..+|++-....++.++.+
T Consensus 155 ~~~~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~ 216 (273)
T 1ouv_A 155 LYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELE 216 (273)
T ss_dssp HHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCC
Confidence 11 1111111222222222334556667777667 778888888887776654
No 73
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=87.22 E-value=14 Score=31.97 Aligned_cols=171 Identities=12% Similarity=0.084 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHhh--cCCCCCccc---cccccchhHHHHHhhcChHHHHHHHHHHHH-----HHHHHHHHhc--CCCCC
Q psy5989 17 SQKAYQQAFEISKS--KMQPTHPIR---LGLALNFSVFYYEILNSPDKACQLAKQVCA-----HYFCFYFFLM--NDPEF 84 (220)
Q Consensus 17 a~~aYq~A~eiA~~--~L~pt~Pir---LGLaLN~SVF~yEIl~~~~~A~~lAk~A~~-----d~~~~~~~~~--~~~e~ 84 (220)
+.+.|.+|...-.. ...|.+|-- ++.++..--..|...++.++|....++++. ..+..+..+. .++.
T Consensus 214 a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~- 292 (537)
T 3fp2_A 214 ANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPTPNSYIFLALTLADKENS- 292 (537)
T ss_dssp HHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSCC-
T ss_pred HHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcCH-
Confidence 33445555544332 345666532 444555555566778999999999988875 3455555552 2233
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh-------
Q psy5989 85 SPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASR------- 157 (220)
Q Consensus 85 ~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld------- 157 (220)
+.|...|++++++ .|.+|. ...+.+..++ -.++.++|+...++++...-...+
T Consensus 293 -----------~~A~~~~~~~~~~-----~~~~~~---~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 352 (537)
T 3fp2_A 293 -----------QEFFKFFQKAVDL-----NPEYPP---TYYHRGQMYF-ILQDYKNAKEDFQKAQSLNPENVYPYIQLAC 352 (537)
T ss_dssp -----------HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCSHHHHHHHH
T ss_pred -----------HHHHHHHHHHhcc-----CCCCHH---HHHHHHHHHH-hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 6788888888764 355443 2344444444 478999999888877653211111
Q ss_pred -----hhhhhhhHHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhcC
Q psy5989 158 -----DTKRSVCLLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTETG 209 (220)
Q Consensus 158 -----~~~~d~~lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~~ 209 (220)
.-+.++..+++...... -..-+-...++.+..+..+|++-....+++++.+
T Consensus 353 ~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 408 (537)
T 3fp2_A 353 LLYKQGKFTESEAFFNETKLKF-PTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLE 408 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcC
Confidence 11222322222222211 1233466778888888899999999888877653
No 74
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=86.86 E-value=12 Score=31.04 Aligned_cols=120 Identities=10% Similarity=0.099 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH-----------HHHHHHHh--cC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH-----------YFCFYFFL--MN 80 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d-----------~~~~~~~~--~~ 80 (220)
.+.|...|++|++++...-.+.+|.......|.+..++ -.++.++|....++++.. .+..+..+ ..
T Consensus 109 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~ 187 (373)
T 1hz4_A 109 LQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLW-AWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLAR 187 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHc
Confidence 45788899999998875444445654444455555554 458999999999888653 23333333 22
Q ss_pred CCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccch-hHHHHHHHhcChHHHHHHHHHHH
Q psy5989 81 DPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALN-FSVFYYEIINSPARACHLAKQVK 149 (220)
Q Consensus 81 ~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN-~SVF~yEIl~~~~~A~~iAk~Af 149 (220)
|+. +.|...|+++..+... +.+|..+...++ .-+..+--.+++++|....+++.
T Consensus 188 g~~------------~~A~~~l~~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~ 242 (373)
T 1hz4_A 188 GDL------------DNARSQLNRLENLLGN---GKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTA 242 (373)
T ss_dssp TCH------------HHHHHHHHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred CCH------------HHHHHHHHHHHHHHhc---cCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCC
Confidence 222 6778888888877643 222211111111 11223445678887777766553
No 75
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=85.83 E-value=15 Score=31.00 Aligned_cols=49 Identities=12% Similarity=0.174 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhccc-chhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLA-LNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~-LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|+++++ +.|.+|..+.-. .+.+.. |.-.++.++|+...+++..
T Consensus 274 ~~A~~~~~~~l~-----~~p~~~~~~~~~~~~l~~~-~~~~g~~~~A~~~~~~a~~ 323 (450)
T 2y4t_A 274 TDATSKYESVMK-----TEPSIAEYTVRSKERICHC-FSKDEKPVEAIRVCSEVLQ 323 (450)
T ss_dssp HHHHHHHHHHHH-----HCCSSHHHHHHHHHHHHHH-HHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----cCCcchHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHH
Confidence 566667777664 356676543333 333333 4446888888877777654
No 76
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=85.69 E-value=7.1 Score=31.04 Aligned_cols=79 Identities=11% Similarity=0.113 Sum_probs=46.1
Q ss_pred HHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhc
Q psy5989 51 YEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLG 122 (220)
Q Consensus 51 yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLG 122 (220)
|.-.++.++|....++++. ..+..+..+ ..++ .+.|...|++++++ .|.+|.
T Consensus 148 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~------------~~~A~~~~~~~~~~-----~~~~~~--- 207 (327)
T 3cv0_A 148 FAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNN------------YDSAAANLRRAVEL-----RPDDAQ--- 207 (327)
T ss_dssp TTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHH-----CTTCHH---
T ss_pred HHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhcc------------HHHHHHHHHHHHHh-----CCCcHH---
Confidence 3445667777777776653 233333333 2222 26777888877754 344442
Q ss_pred ccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 123 LALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 123 L~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
...+.+..++. .++.++|+...++++.
T Consensus 208 ~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 234 (327)
T 3cv0_A 208 LWNKLGATLAN-GNRPQEALDAYNRALD 234 (327)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 23444555544 7888888887777654
No 77
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=85.23 E-value=4 Score=29.66 Aligned_cols=80 Identities=16% Similarity=0.179 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~ 85 (220)
-+.|...|++|+++ .|.+|. +..|.+.- |--+++.++|+...++|+. ..+..+..+ ..++.
T Consensus 29 ~~~A~~~~~~al~~-----~p~~~~---~~~~~~~~-~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~-- 97 (126)
T 4gco_A 29 YPTAMRHYNEAVKR-----DPENAI---LYSNRAAC-LTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREW-- 97 (126)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHHHH-HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH--
T ss_pred HHHHHHHHHHHHHh-----CCCCHH---HHHHHhhH-HHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCH--
Confidence 46788889988864 455553 23344443 3467899999998888864 334444444 22222
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPI 119 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~Pi 119 (220)
+.|...|++|+++ .|.||-
T Consensus 98 ----------~~A~~~~~~al~l-----~P~~~~ 116 (126)
T 4gco_A 98 ----------SKAQRAYEDALQV-----DPSNEE 116 (126)
T ss_dssp ----------HHHHHHHHHHHHH-----CTTCHH
T ss_pred ----------HHHHHHHHHHHHH-----CcCCHH
Confidence 7889999999864 577763
No 78
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=84.86 E-value=3.3 Score=32.64 Aligned_cols=105 Identities=18% Similarity=0.191 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH-----HHHHHHHHh--cCCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA-----HYFCFYFFL--MNDPEFSP 86 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~-----d~~~~~~~~--~~~~e~~~ 86 (220)
.+.|...|++|+++ .|.+|. ..+|.+.. |.-+++.++|+..-++|+. ..+..+..+ ..++.
T Consensus 100 ~~~A~~~~~~al~~-----~P~~~~---~~~~lg~~-~~~~g~~~~A~~~~~~al~~~~~~~~~~~la~~~~~~g~~--- 167 (217)
T 2pl2_A 100 LEQALSVLKDAERV-----NPRYAP---LHLQRGLV-YALLGERDKAEASLKQALALEDTPEIRSALAELYLSMGRL--- 167 (217)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHHHH-HHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCH---
T ss_pred HHHHHHHHHHHHHh-----CcccHH---HHHHHHHH-HHHcCChHHHHHHHHHHHhcccchHHHHHHHHHHHHcCCH---
Confidence 56777778777753 555553 22344443 3467889999998888865 344444444 22333
Q ss_pred CccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHH
Q psy5989 87 LFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQV 148 (220)
Q Consensus 87 ~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~A 148 (220)
+.|...|++++++ .|.+| .+..|.+..+.. .++.++|+...+++
T Consensus 168 ---------~~A~~~~~~al~~-----~P~~~---~~~~~la~~~~~-~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 168 ---------DEALAQYAKALEQ-----APKDL---DLRVRYASALLL-KGKAEEAARAAALE 211 (217)
T ss_dssp ---------HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHTC---------------
T ss_pred ---------HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-ccCHHHHHHHHHHH
Confidence 7788899988863 56665 334455554444 57777777665543
No 79
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=84.47 E-value=15 Score=29.90 Aligned_cols=118 Identities=8% Similarity=-0.012 Sum_probs=70.2
Q ss_pred chhHHHHHhhcChHHHHHHHHHHHH--------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCC
Q psy5989 45 NFSVFYYEILNSPDKACQLAKQVCA--------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQ 114 (220)
Q Consensus 45 N~SVF~yEIl~~~~~A~~lAk~A~~--------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~ 114 (220)
+...++ -.++.++|....++++. ..+..+..+ ..++. +.|...|++++.+ .
T Consensus 187 ~~~~~~--~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~------------~~A~~~~~~al~~-----~ 247 (368)
T 1fch_A 187 ILGSLL--SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEY------------DKAVDCFTAALSV-----R 247 (368)
T ss_dssp TTHHHH--HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHHH-----C
T ss_pred HHHHHh--hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCH------------HHHHHHHHHHHHh-----C
Confidence 344444 67888999888887753 333333443 22222 6788888888764 4
Q ss_pred CCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccccchhHHHHHHHHHHHHHhh
Q psy5989 115 PTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSSSGEKEELVQRAKLAEQAER 194 (220)
Q Consensus 115 pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~~s~r~~~~~~akl~eq~er 194 (220)
|.+|. ...+.+..+.. .++.++|+..-++++.. + . ..-.-+..++.+..+..+
T Consensus 248 ~~~~~---~~~~l~~~~~~-~g~~~~A~~~~~~al~~-----~---~---------------~~~~~~~~l~~~~~~~g~ 300 (368)
T 1fch_A 248 PNDYL---LWNKLGATLAN-GNQSEEAVAAYRRALEL-----Q---P---------------GYIRSRYNLGISCINLGA 300 (368)
T ss_dssp TTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH-----C---T---------------TCHHHHHHHHHHHHHHTC
T ss_pred cCCHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHh-----C---C---------------CcHHHHHHHHHHHHHCCC
Confidence 55543 33445554444 78888888777766542 1 0 011224456666666777
Q ss_pred HHHHHHHHHHhHhc
Q psy5989 195 YDDMAAAMKAVTET 208 (220)
Q Consensus 195 y~~m~~~~~~~~~~ 208 (220)
|++-....+++++.
T Consensus 301 ~~~A~~~~~~al~~ 314 (368)
T 1fch_A 301 HREAVEHFLEALNM 314 (368)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 77777777766553
No 80
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=83.81 E-value=11 Score=27.83 Aligned_cols=143 Identities=15% Similarity=0.140 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~ 85 (220)
.+.|...|++|+++ .|.||-- ..+.+ ..|.-+++.++|....+.+... .+..+..+ ..++
T Consensus 21 ~~~A~~~~~~al~~-----~p~~~~~---~~~la-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 88 (184)
T 3vtx_A 21 FDGAIRAYKKVLKA-----DPNNVET---LLKLG-KTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDE--- 88 (184)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHHH---HHHHH-HHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHh-----CCCCHHH---HHHHH-HHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCC---
Confidence 56788899998864 5666532 12222 2345678889988887776432 22222222 1111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhH
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCL 165 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~l 165 (220)
.+.+...+++|.. +.|.+|. ...+.+..++. +++.++|+..-++++.. +.
T Consensus 89 ---------~~~a~~~~~~a~~-----~~~~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~~l~~-----~p------- 138 (184)
T 3vtx_A 89 ---------KQAAIDALQRAIA-----LNTVYAD---AYYKLGLVYDS-MGEHDKAIEAYEKTISI-----KP------- 138 (184)
T ss_dssp ---------HHHHHHHHHHHHH-----HCTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH-----CT-------
T ss_pred ---------HHHHHHHHHHHHH-----hCccchH---HHHHHHHHHHH-hCCchhHHHHHHHHHHh-----cc-------
Confidence 2566777777764 3455553 23334444444 68888887776655431 11
Q ss_pred HHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhcC
Q psy5989 166 LCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTETG 209 (220)
Q Consensus 166 ilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~~ 209 (220)
..-+-+..++.+-.+..+|++-+.+.+++++..
T Consensus 139 -----------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 171 (184)
T 3vtx_A 139 -----------GFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKE 171 (184)
T ss_dssp -----------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred -----------hhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCC
Confidence 111235567777778889999999998887754
No 81
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=83.25 E-value=18 Score=35.07 Aligned_cols=149 Identities=11% Similarity=0.044 Sum_probs=85.5
Q ss_pred CccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHH
Q psy5989 36 HPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFD 107 (220)
Q Consensus 36 ~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~e 107 (220)
+|-.-....|...-| .-+++.++|+..-++|+. ..+..+..+ ..++. +.|..+|++|++
T Consensus 5 ~P~~a~al~nLG~~~-~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~------------~eA~~~~~~Al~ 71 (723)
T 4gyw_A 5 CPTHADSLNNLANIK-REQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKL------------QEALMHYKEAIR 71 (723)
T ss_dssp -CHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH------------HHHHHHHHHHHH
Confidence 343333344455444 457889999999888874 455555555 22333 789999999986
Q ss_pred HHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHH------HHHhhhhh------hhhhh-HHHHHhhccc
Q psy5989 108 IAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYS------CIGASRDT------KRSVC-LLCEIFHTMS 174 (220)
Q Consensus 108 iA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afde------Ai~eld~~------~~d~~-lilq~L~~~s 174 (220)
+ .|.++ ....|.+.-+.+ +++.++|+..-++|+.- |...+-.. +.++. .+-+.|.-.-
T Consensus 72 l-----~P~~~---~a~~nLg~~l~~-~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P 142 (723)
T 4gyw_A 72 I-----SPTFA---DAYSNMGNTLKE-MQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKP 142 (723)
T ss_dssp H-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred h-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4 45554 345566666666 68999988877776531 11111111 11111 1111111111
Q ss_pred ccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 175 SSGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 175 ~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
..-+-+..++.+-.+..+|++-.+.++++++.
T Consensus 143 --~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l 174 (723)
T 4gyw_A 143 --DFPDAYCNLAHCLQIVCDWTDYDERMKKLVSI 174 (723)
T ss_dssp --CCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHH
T ss_pred --CChHHHhhhhhHHHhcccHHHHHHHHHHHHHh
Confidence 22345666777777777888888877777664
No 82
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=82.74 E-value=11 Score=27.95 Aligned_cols=106 Identities=17% Similarity=0.227 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~ 85 (220)
+++|..+|+.|.. .+|.+|. ..++.+..|++ +++.++|...-++|+. ..+..+..+ ..++.
T Consensus 13 ~e~ai~~~~~a~~-----~~p~~~~---~~~~la~~y~~-~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~-- 81 (150)
T 4ga2_A 13 VERYIASVQGSTP-----SPRQKSI---KGFYFAKLYYE-AKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT-- 81 (150)
T ss_dssp HHHHHHHHHHHSC-----SHHHHHT---THHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH--
T ss_pred HHHHHHHHHHhcc-----cCcccHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch--
Confidence 5677777776643 2333443 33455555554 6889999998888764 344555555 22333
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHH
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQV 148 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~A 148 (220)
+.|..+|++|+++ .|.+|. ...|.+..++..-+..+.|....++|
T Consensus 82 ----------~~A~~~~~~al~~-----~p~~~~---~~~~la~~~~~~~~~~~aa~~~~~~a 126 (150)
T 4ga2_A 82 ----------DKAVECYRRSVEL-----NPTQKD---LVLKIAELLCKNDVTDGRAKYWVERA 126 (150)
T ss_dssp ----------HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHHHCSSSSHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 7889999999864 466654 45677777777543333333333443
No 83
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=82.55 E-value=17 Score=28.88 Aligned_cols=30 Identities=7% Similarity=0.037 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhHhcC
Q psy5989 180 EELVQRAKLAEQAERYDDMAAAMKAVTETG 209 (220)
Q Consensus 180 ~~~~~~akl~eq~ery~~m~~~~~~~~~~~ 209 (220)
.-+..++.+..+..+|++-....+++++.+
T Consensus 237 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 266 (330)
T 3hym_B 237 PLLNNLGHVCRKLKKYAEALDYHRQALVLI 266 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 355667777777888888888877776643
No 84
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=81.96 E-value=8 Score=29.84 Aligned_cols=93 Identities=11% Similarity=0.131 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH-------------HHHHHHHHh--
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA-------------HYFCFYFFL-- 78 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~-------------d~~~~~~~~-- 78 (220)
.+.|...|++|++ +.|.+|. ...+.+. .|.-+++.++|....++++. ..+..+..+
T Consensus 58 ~~~A~~~~~~al~-----~~p~~~~---~~~~l~~-~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~ 128 (228)
T 4i17_A 58 YKEAADYFDIAIK-----KNYNLAN---AYIGKSA-AYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQ 128 (228)
T ss_dssp HHHHHHHHHHHHH-----TTCSHHH---HHHHHHH-HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----hCcchHH---HHHHHHH-HHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHH
Confidence 3566777777763 4455432 2233333 34567899999998888875 223333333
Q ss_pred cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHH
Q psy5989 79 MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYE 133 (220)
Q Consensus 79 ~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yE 133 (220)
..++ .++|...|++|++ +.|.+. ......|.+..|+.
T Consensus 129 ~~~~------------~~~A~~~~~~al~-----~~p~~~-~~~~~~~l~~~~~~ 165 (228)
T 4i17_A 129 QAGN------------IEKAEENYKHATD-----VTSKKW-KTDALYSLGVLFYN 165 (228)
T ss_dssp HTTC------------HHHHHHHHHHHTT-----SSCHHH-HHHHHHHHHHHHHH
T ss_pred Hhcc------------HHHHHHHHHHHHh-----cCCCcc-cHHHHHHHHHHHHH
Confidence 2222 2678888888764 334400 33444555555554
No 85
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=81.92 E-value=20 Score=31.95 Aligned_cols=108 Identities=9% Similarity=0.146 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------HHHHHHHh---cCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------YFCFYFFL---MNDPEF 84 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------~~~~~~~~---~~~~e~ 84 (220)
.+.|...|+.|++ ++|.+|.. +-+++..|+. -.++.++|..+-++|+.. .+.-..-+ ..++.
T Consensus 337 ~~~A~~~~~~al~-----~~p~~~~~--~~~~~~~~~~-~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~- 407 (530)
T 2ooe_A 337 YEKVHSIYNRLLA-----IEDIDPTL--VYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDK- 407 (530)
T ss_dssp HHHHHHHHHHHHH-----SSSSCHHH--HHHHHHHHHH-HHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCH-
T ss_pred HHHHHHHHHHHhC-----ccccCchH--HHHHHHHHHH-HhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCCh-
Confidence 4567777777764 35555421 3344555533 345566666666666542 11111111 12222
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 85 SPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 85 ~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|+.|++. .|.+| .+.++|.-|+.. .++.++|..+-++|..
T Consensus 408 -----------~~A~~~~e~al~~-----~p~~~---~~~~~~~~~~~~-~g~~~~Ar~~~~~al~ 453 (530)
T 2ooe_A 408 -----------SVAFKIFELGLKK-----YGDIP---EYVLAYIDYLSH-LNEDNNTRVLFERVLT 453 (530)
T ss_dssp -----------HHHHHHHHHHHHH-----HTTCH---HHHHHHHHHHTT-TTCHHHHHHHHHHHHH
T ss_pred -----------hHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHh-CCCHhhHHHHHHHHHh
Confidence 5666666666653 24443 344666665544 4666667666666655
No 86
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=81.75 E-value=10 Score=26.02 Aligned_cols=49 Identities=18% Similarity=0.213 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|+.++. +.|.+|......++.+.-++. +++.++|+..-++++.
T Consensus 56 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~ 104 (129)
T 2xev_A 56 QLAEAQFRDLVS-----RYPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVAT 104 (129)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 677888888775 357776655555566665554 7888887776655543
No 87
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=81.25 E-value=15 Score=27.78 Aligned_cols=46 Identities=7% Similarity=-0.062 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|++|+++ .|.++ ...++.+..++. +++.++|+..-++++.
T Consensus 105 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 150 (198)
T 2fbn_A 105 PKAIDHASKVLKI-----DKNNV---KALYKLGVANMY-FGFLEEAKENLYKAAS 150 (198)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 6788888888864 34444 334555655554 6888888777666553
No 88
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=81.07 E-value=8.9 Score=28.17 Aligned_cols=55 Identities=20% Similarity=0.276 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHhcC---CCC-------CcchhcccchhHHHHHHHhcChHHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKM---QPT-------HPIRLGLALNFSVFYYEIINSPARACHLAKQVKYS 151 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L---~pt-------~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afde 151 (220)
+.|...|++|+.+..... .|. +|....+..|.+.-|+. +++.++|+..+.+|+.-
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~~ 92 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLKR 92 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHhc
Confidence 788899999998754321 233 56677778888877666 68999988888777643
No 89
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=81.01 E-value=16 Score=27.68 Aligned_cols=165 Identities=8% Similarity=0.075 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~ 85 (220)
.+.|...|+++++ ..|.++. ...+. ...|...++.++|....++++. ..+..+..+ ..++.
T Consensus 39 ~~~A~~~~~~~l~-----~~~~~~~---~~~~l-a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~-- 107 (243)
T 2q7f_A 39 YEKAAEAFTKAIE-----ENKEDAI---PYINF-ANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMY-- 107 (243)
T ss_dssp ---CCTTHHHHHT-----TCTTCHH---HHHHH-HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH--
T ss_pred HHHHHHHHHHHHH-----hCcccHH---HHHHH-HHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccH--
Confidence 3455566666653 3343332 11122 2233456777777777766654 233334443 22222
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh--------
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASR-------- 157 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld-------- 157 (220)
+.|...|++++++ .|.+|. ...+.+..++ -.++.++|+...++++...-...+
T Consensus 108 ----------~~A~~~~~~~~~~-----~~~~~~---~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 168 (243)
T 2q7f_A 108 ----------KEAKDMFEKALRA-----GMENGD---LFYMLGTVLV-KLEQPKLALPYLQRAVELNENDTEARFQFGMC 168 (243)
T ss_dssp ----------HHHHHHHHHHHHH-----TCCSHH---HHHHHHHHHH-HTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHH-HhccHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 5667777777653 233332 2333344333 367777777777666543211111
Q ss_pred ----hhhhhhhHHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhcC
Q psy5989 158 ----DTKRSVCLLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTETG 209 (220)
Q Consensus 158 ----~~~~d~~lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~~ 209 (220)
.-+.++...++...... -..-.-+..++.+..+..+|++-....+++++..
T Consensus 169 ~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 223 (243)
T 2q7f_A 169 LANEGMLDEALSQFAAVTEQD-PGHADAFYNAGVTYAYKENREKALEMLDKAIDIQ 223 (243)
T ss_dssp HHHHTCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHC
T ss_pred HHHcCCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHccCHHHHHHHHHHHHccC
Confidence 11222222222211111 1223456777888888888888888888877643
No 90
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=79.57 E-value=24 Score=28.93 Aligned_cols=155 Identities=13% Similarity=0.066 Sum_probs=83.9
Q ss_pred CCCCCcccccc-ccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHH
Q psy5989 32 MQPTHPIRLGL-ALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAY 102 (220)
Q Consensus 32 L~pt~PirLGL-aLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aY 102 (220)
..+.||..-.- .++... .|--.++.++|..+.++++. ..+..+..+ ..++ .+.|...|
T Consensus 56 ~~~~~~~~~~~~~~~~~~-~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~------------~~~A~~~~ 122 (365)
T 4eqf_A 56 FHTENPFKDWPGAFEEGL-KRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENEN------------EQAAIVAL 122 (365)
T ss_dssp CCSSCTTTTCTTHHHHHH-HHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------------HHHHHHHH
T ss_pred cccCCcccchhHHHHHHH-HHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCC------------HHHHHHHH
Confidence 45666644222 233333 34456889999998888864 334444444 2233 27788888
Q ss_pred HHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh----------------------hhh
Q psy5989 103 QEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASR----------------------DTK 160 (220)
Q Consensus 103 q~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld----------------------~~~ 160 (220)
++++++ .|.++. ...+.+..+. -.++.++|+..-++++...-...+ .-+
T Consensus 123 ~~al~~-----~p~~~~---~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 193 (365)
T 4eqf_A 123 QRCLEL-----QPNNLK---ALMALAVSYT-NTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVL 193 (365)
T ss_dssp HHHHHH-----CTTCHH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHH
T ss_pred HHHHhc-----CCCCHH---HHHHHHHHHH-ccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhH
Confidence 888764 355543 2334444444 478999998888877653211100 112
Q ss_pred hhhh-HHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 161 RSVC-LLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 161 ~d~~-lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
.++. .+-+.+.......+-.-+..++.+..+..+|++-....+++++.
T Consensus 194 ~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 242 (365)
T 4eqf_A 194 EGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTV 242 (365)
T ss_dssp HHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 2221 11112211111113345566677777777777777777776654
No 91
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=79.28 E-value=33 Score=30.22 Aligned_cols=124 Identities=8% Similarity=-0.068 Sum_probs=73.0
Q ss_pred HHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcch
Q psy5989 49 FYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIR 120 (220)
Q Consensus 49 F~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~Pir 120 (220)
..|...++.++|..+-++++. ..+..+..+ ..++ .+.|.+.|++++++... .+.+|-.
T Consensus 449 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~------------~~~A~~~~~~~~~~~~~--~~~~p~~ 514 (597)
T 2xpi_A 449 MQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSD------------MQTAINHFQNALLLVKK--TQSNEKP 514 (597)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHHHH--SCCCSGG
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC------------HHHHHHHHHHHHHhhhc--cccchhh
Confidence 344567788888877777654 122223333 2222 37888889988887653 1445554
Q ss_pred hcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHH
Q psy5989 121 LGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAA 200 (220)
Q Consensus 121 LGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~ 200 (220)
...+++.=.-.|-..++.++|+...++++... . .+-.-.+.++.+-.+..+|++-..
T Consensus 515 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-------p----------------~~~~~~~~l~~~~~~~g~~~~A~~ 571 (597)
T 2xpi_A 515 WAATWANLGHAYRKLKMYDAAIDALNQGLLLS-------T----------------NDANVHTAIALVYLHKKIPGLAIT 571 (597)
T ss_dssp GHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-------S----------------CCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-------C----------------CChHHHHHHHHHHHHhCCHHHHHH
Confidence 32333322333444788888888777766431 0 111344566677777778888888
Q ss_pred HHHHhHhcC
Q psy5989 201 AMKAVTETG 209 (220)
Q Consensus 201 ~~~~~~~~~ 209 (220)
..+++++..
T Consensus 572 ~~~~~l~~~ 580 (597)
T 2xpi_A 572 HLHESLAIS 580 (597)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhcC
Confidence 887777643
No 92
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=79.02 E-value=7.2 Score=34.86 Aligned_cols=113 Identities=11% Similarity=0.126 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH-------HHHHHHHHhcCCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA-------HYFCFYFFLMNDPEFSP 86 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~-------d~~~~~~~~~~~~e~~~ 86 (220)
.+.|...|+.|+. .+.|. ...+-+++..+ ++-.++.++|..+-++|+. ..+..+..+.
T Consensus 302 ~~~A~~~~~~Al~----~~~p~---~~~l~~~~~~~-~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~------- 366 (530)
T 2ooe_A 302 SDEAANIYERAIS----TLLKK---NMLLYFAYADY-EESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFA------- 366 (530)
T ss_dssp HHHHHHHHHHHTT----TTCSS---CHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHH-------
T ss_pred hHHHHHHHHHHHH----HhCcc---cHHHHHHHHHH-HHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHH-------
Confidence 4678899999874 12333 23344555554 4557899999998888774 2333333332
Q ss_pred CccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy5989 87 LFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSC 152 (220)
Q Consensus 87 ~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeA 152 (220)
.+..-.+.|...|++|++ .+|.+ ..+.+..+...|...+++++|+.+-++|+...
T Consensus 367 ---~~~~~~~~A~~~~~~Al~-----~~~~~---~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~ 421 (530)
T 2ooe_A 367 ---RRAEGIKSGRMIFKKARE-----DARTR---HHVYVTAALMEYYCSKDKSVAFKIFELGLKKY 421 (530)
T ss_dssp ---HHHHHHHHHHHHHHHHHT-----CTTCC---THHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred ---HHhcCHHHHHHHHHHHHh-----ccCCc---hHHHHHHHHHHHHHcCChhHHHHHHHHHHHHC
Confidence 134456889999999975 34433 22333444455667899999999999887654
No 93
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=78.87 E-value=11 Score=29.28 Aligned_cols=54 Identities=9% Similarity=0.054 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|++++++....-.+.++.......+.+.+|+ -.++.++|+...++++.
T Consensus 196 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 196 GLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYT-INRDKVKADAAWKNILA 249 (272)
T ss_dssp CTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHh
Confidence 3467889999888754222221222233444455544 47999998887777663
No 94
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=78.76 E-value=13 Score=25.23 Aligned_cols=83 Identities=7% Similarity=-0.084 Sum_probs=50.4
Q ss_pred HHHHhhcChHHHHHHHHHHHH------HHHHHHHHhcCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhc
Q psy5989 49 FYYEILNSPDKACQLAKQVCA------HYFCFYFFLMNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLG 122 (220)
Q Consensus 49 F~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLG 122 (220)
..|.-.++.++|+...++++. ..+..+..+..... -.+.|...|++++.+ .|.+|.
T Consensus 24 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~----------~~~~A~~~~~~a~~~-----~~~~~~--- 85 (133)
T 2lni_A 24 NECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLL----------EFQLALKDCEECIQL-----EPTFIK--- 85 (133)
T ss_dssp HHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTT----------CHHHHHHHHHHHHHH-----CTTCHH---
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhc----------cHHHHHHHHHHHHHh-----CCCchH---
Confidence 344567788888888887763 33444444422211 126788888888764 344442
Q ss_pred ccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 123 LALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 123 L~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
...+.+..++. +++.++|+...++++.
T Consensus 86 ~~~~la~~~~~-~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 86 GYTRKAAALEA-MKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HhhHHHHHHHHHHHHH
Confidence 34555555444 6888888877776654
No 95
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=78.51 E-value=30 Score=29.41 Aligned_cols=110 Identities=13% Similarity=0.128 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCCC
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFSP 86 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~~ 86 (220)
+.|...|+++++ +.|.+|. ...+. ...|.-.++.++|....++++.. .+..+..+ ..++
T Consensus 321 ~~A~~~~~~~~~-----~~~~~~~---~~~~l-~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~---- 387 (514)
T 2gw1_A 321 DQAGKDFDKAKE-----LDPENIF---PYIQL-ACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKND---- 387 (514)
T ss_dssp THHHHHHHHHHH-----TCSSCSH---HHHHH-HHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHH-----hChhhHH---HHHHH-HHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCC----
Confidence 355666666654 3444433 11222 22334567888888887777642 23333333 2222
Q ss_pred CccccHHHHHHHHHHHHHHHHHHHhcCCCCCcch---hcccchhHHHHHHH--hcChHHHHHHHHHHHH
Q psy5989 87 LFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIR---LGLALNFSVFYYEI--INSPARACHLAKQVKY 150 (220)
Q Consensus 87 ~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~Pir---LGL~LN~SVF~yEI--l~~~~~A~~iAk~Afd 150 (220)
.+.|...|++++++.. .+|.. .....+.+..++.. .++.++|+...++++.
T Consensus 388 --------~~~A~~~~~~a~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~ 443 (514)
T 2gw1_A 388 --------FDKALKQYDLAIELEN-----KLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASK 443 (514)
T ss_dssp --------HHHHHHHHHHHHHHHH-----TSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHhhh-----ccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Confidence 2678888888887653 33321 11334444444442 6788888777766654
No 96
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=77.53 E-value=16 Score=27.77 Aligned_cols=93 Identities=10% Similarity=0.094 Sum_probs=58.5
Q ss_pred CccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHH
Q psy5989 36 HPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFD 107 (220)
Q Consensus 36 ~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~e 107 (220)
+|-......+.++-+ --.++.++|...-++++. +++..+..+ ..++. +.|..+|++|+.
T Consensus 32 ~p~~~~~~~~lg~~~-~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~------------~~Ai~~~~~al~ 98 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDF-YNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQF------------QQAADLYAVAFA 98 (151)
T ss_dssp CHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccH------------HHHHHHHHHHHh
Confidence 333333344444443 357889999999888874 344444444 33333 789999999986
Q ss_pred HHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 108 IAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 108 iA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|.+|. ...|.++-|.. ++++++|+..-++|+.
T Consensus 99 -----l~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 99 -----LGKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp -----HSSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred -----hCCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 4577775 34566665554 7998887766555543
No 97
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=76.70 E-value=22 Score=26.86 Aligned_cols=109 Identities=10% Similarity=0.067 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~ 85 (220)
.+.|...|++++++ .|.++. ...+.+ ..|.-.++.++|....++++. ..+..+..+ ..++.
T Consensus 73 ~~~A~~~~~~~~~~-----~~~~~~---~~~~la-~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-- 141 (243)
T 2q7f_A 73 LERALAFYDKALEL-----DSSAAT---AYYGAG-NVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQP-- 141 (243)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHH-HHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCH--
T ss_pred HHHHHHHHHHHHHc-----CCcchH---HHHHHH-HHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccH--
Confidence 46777888887764 233321 112222 234457888888888877664 234444444 23333
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSC 152 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeA 152 (220)
+.|...|++++++ .|.+|. ...+.+..++. .++.++|+...+++....
T Consensus 142 ----------~~A~~~~~~~~~~-----~~~~~~---~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~ 189 (243)
T 2q7f_A 142 ----------KLALPYLQRAVEL-----NENDTE---ARFQFGMCLAN-EGMLDEALSQFAAVTEQD 189 (243)
T ss_dssp ----------HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-HTCCHHHHHHHHHHHHHC
T ss_pred ----------HHHHHHHHHHHHh-----CCccHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 6777788877754 333332 23344444444 578888888888877663
No 98
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=76.11 E-value=16 Score=28.85 Aligned_cols=97 Identities=15% Similarity=0.164 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHh-------hcChHHHHHHHHHHHHHH---------H------
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEI-------LNSPDKACQLAKQVCAHY---------F------ 72 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEI-------l~~~~~A~~lAk~A~~d~---------~------ 72 (220)
+.|...|+.++. +.|.+|..-....+.+.-++.. .++.++|+..-++++... .
T Consensus 69 ~~A~~~~~~~l~-----~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~ 143 (261)
T 3qky_A 69 LLAASEYERFIQ-----IYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIREL 143 (261)
T ss_dssp HHHHHHHHHHHH-----HCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHH
Confidence 466677777665 3566665333333333333332 677788877766665421 0
Q ss_pred --------HHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHH
Q psy5989 73 --------CFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYE 133 (220)
Q Consensus 73 --------~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yE 133 (220)
..+..+ ..++. +.|...|+++++ ..|.+|.......+.+.-|+.
T Consensus 144 ~~~~~~~~~~la~~~~~~g~~------------~~A~~~~~~~l~-----~~p~~~~~~~a~~~l~~~~~~ 197 (261)
T 3qky_A 144 RAKLARKQYEAARLYERRELY------------EAAAVTYEAVFD-----AYPDTPWADDALVGAMRAYIA 197 (261)
T ss_dssp HHHHHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCH------------HHHHHHHHHHHH-----HCCCCchHHHHHHHHHHHHHH
Confidence 112222 22222 677888888775 357777655555555555544
No 99
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=75.71 E-value=23 Score=26.57 Aligned_cols=107 Identities=14% Similarity=0.150 Sum_probs=61.7
Q ss_pred HHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCCCCcccc
Q psy5989 20 AYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFSPLFPCS 91 (220)
Q Consensus 20 aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~~~~~~k 91 (220)
-|++|.+.-..-++| +| ....|.+. .|--+++.++|....++|+.. .+..+..+ ..++.
T Consensus 21 ~~~~A~~~~~~a~~~-~~---~~~~~lg~-~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~-------- 87 (213)
T 1hh8_A 21 DWKGALDAFSAVQDP-HS---RICFNIGC-MYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKY-------- 87 (213)
T ss_dssp CHHHHHHHHHTSSSC-CH---HHHHHHHH-HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH--------
T ss_pred CHHHHHHHHHHHcCC-Ch---HHHHHHHH-HHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccH--------
Confidence 355555554443444 32 12233333 344678999999988888742 33334444 22333
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCc-------------chhcccchhHHHHHHHhcChHHHHHHHHHHH
Q psy5989 92 LAVVEDSQKAYQEAFDIAKSKMQPTHP-------------IRLGLALNFSVFYYEIINSPARACHLAKQVK 149 (220)
Q Consensus 92 ~~~~e~a~~aYq~A~eiA~~~L~pt~P-------------irLGL~LN~SVF~yEIl~~~~~A~~iAk~Af 149 (220)
+.|...|++++++ .|.++ .......|.+..++. +++.++|+..-++++
T Consensus 88 ----~~A~~~~~~al~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 88 ----DLAIKDLKEALIQ-----LRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALAT 148 (213)
T ss_dssp ----HHHHHHHHHHHHT-----TTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHh-----CCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 6788888888764 34443 333445566666655 688888877666554
No 100
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=75.55 E-value=37 Score=28.87 Aligned_cols=172 Identities=8% Similarity=0.035 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHHHhhcC--CCCC----ccccccccchhHHHHHhhcChHHHHHHHHHHHH-----HHHHHHHHh--cC
Q psy5989 14 VDDSQKAYQQAFEISKSKM--QPTH----PIRLGLALNFSVFYYEILNSPDKACQLAKQVCA-----HYFCFYFFL--MN 80 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L--~pt~----PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~-----d~~~~~~~~--~~ 80 (220)
.+.|...|+++++.-...+ .|.+ |-......+.+ ..|--.++.++|+...++++. ..+..+..+ ..
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~A~~~~~~~l~~~~~~~~~~~l~~~~~~~ 283 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTG-IFKFLKNDPLGAHEDIKKAIELFPRVNSYIYMALIMADR 283 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHH-HHHHHSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHhhCccHHHHHHHHHHHHHC
Confidence 5677788888877432223 4444 33333333333 344567899999998888763 444445554 22
Q ss_pred CCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh---
Q psy5989 81 DPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASR--- 157 (220)
Q Consensus 81 ~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld--- 157 (220)
++. +.|...|++++. +.|.+|. ...+.+..++. .++.++|+...++++...-...+
T Consensus 284 ~~~------------~~A~~~~~~~~~-----~~~~~~~---~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~ 342 (514)
T 2gw1_A 284 NDS------------TEYYNYFDKALK-----LDSNNSS---VYYHRGQMNFI-LQNYDQAGKDFDKAKELDPENIFPYI 342 (514)
T ss_dssp SCC------------TTGGGHHHHHHT-----TCTTCTH---HHHHHHHHHHH-TTCTTHHHHHHHHHHHTCSSCSHHHH
T ss_pred CCH------------HHHHHHHHHHhh-----cCcCCHH---HHHHHHHHHHH-hCCHHHHHHHHHHHHHhChhhHHHHH
Confidence 222 445667777663 4555553 23444444444 68888888887777542111110
Q ss_pred ---------hhhhhhhHHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 158 ---------DTKRSVCLLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 158 ---------~~~~d~~lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
.-+.++.-.++...... -..-+-+..++.+.....+|++-....+++++.
T Consensus 343 ~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 401 (514)
T 2gw1_A 343 QLACLAYRENKFDDCETLFSEAKRKF-PEAPEVPNFFAEILTDKNDFDKALKQYDLAIEL 401 (514)
T ss_dssp HHHHHTTTTTCHHHHHHHHHHHHHHS-TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHc-ccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 11222322222221111 122345677788888888999988888877664
No 101
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=74.75 E-value=20 Score=25.45 Aligned_cols=147 Identities=14% Similarity=0.066 Sum_probs=81.0
Q ss_pred HHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------HHHHHHHhcCCCCCCCCccccH
Q psy5989 19 KAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------YFCFYFFLMNDPEFSPLFPCSL 92 (220)
Q Consensus 19 ~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------~~~~~~~~~~~~e~~~~~~~k~ 92 (220)
+-|++|.+.... ....+|-......+. ...|...++.++|....++++.. .+..+..+.. +.
T Consensus 22 ~~~~~A~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~----------~~ 89 (186)
T 3as5_A 22 GRYSQAVMLLEQ-VYDADAFDVDVALHL-GIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYV----------QV 89 (186)
T ss_dssp TCHHHHHHHHTT-TCCTTSCCHHHHHHH-HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH----------HH
T ss_pred cCHHHHHHHHHH-HHHhCccChHHHHHH-HHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH----------Hh
Confidence 345666665543 222333222222222 33445678899998888877643 2222222210 01
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhc
Q psy5989 93 AVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHT 172 (220)
Q Consensus 93 ~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~ 172 (220)
.-.+.|...|++++.+ .|.+| ....+.+..++. .++.++|+...++++... .
T Consensus 90 ~~~~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~--------~----------- 141 (186)
T 3as5_A 90 QKYDLAVPLLIKVAEA-----NPINF---NVRFRLGVALDN-LGRFDEAIDSFKIALGLR--------P----------- 141 (186)
T ss_dssp TCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC--------T-----------
T ss_pred cCHHHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHHH-cCcHHHHHHHHHHHHhcC--------c-----------
Confidence 1125677777777654 34444 233444544444 688888888777765421 0
Q ss_pred ccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhcC
Q psy5989 173 MSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTETG 209 (220)
Q Consensus 173 ~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~~ 209 (220)
....-...++.+.....+|++-...++++++..
T Consensus 142 ----~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 142 ----NEGKVHRAIAFSYEQMGRHEEALPHFKKANELD 174 (186)
T ss_dssp ----TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ----cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 112344667777777888999888888877643
No 102
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=74.70 E-value=20 Score=25.44 Aligned_cols=108 Identities=13% Similarity=0.123 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~ 85 (220)
.+.|...|++++++ .|.+|. ...+.+. .|.-.++.++|....++++.. .+..+..+ ..++
T Consensus 58 ~~~A~~~~~~~~~~-----~~~~~~---~~~~~a~-~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--- 125 (186)
T 3as5_A 58 VDRGTELLERSLAD-----APDNVK---VATVLGL-TYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGR--- 125 (186)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHHH-HHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHhc-----CCCCHH---HHHHHHH-HHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCc---
Confidence 35667777777654 344432 2233333 344578999999888877643 22233333 2222
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHH
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYS 151 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afde 151 (220)
.+.|...|++++.. .|.+| ....+.+..++. .++.++|....+++++.
T Consensus 126 ---------~~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 173 (186)
T 3as5_A 126 ---------FDEAIDSFKIALGL-----RPNEG---KVHRAIAFSYEQ-MGRHEEALPHFKKANEL 173 (186)
T ss_dssp ---------HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHhc-----Cccch---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHc
Confidence 26778888888754 34443 233444544444 78999998888777653
No 103
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=74.53 E-value=27 Score=26.89 Aligned_cols=165 Identities=16% Similarity=0.067 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~ 85 (220)
.+.|...|++|+++ .|.+|. ...+.+. .|.-.++.++|....++++.. .+..+..+ ..++
T Consensus 59 ~~~A~~~~~~al~~-----~~~~~~---~~~~la~-~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~--- 126 (275)
T 1xnf_A 59 RALARNDFSQALAI-----RPDMPE---VFNYLGI-YLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGR--- 126 (275)
T ss_dssp HHHHHHHHHHHHHH-----CCCCHH---HHHHHHH-HHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHc-----CCCcHH---HHHHHHH-HHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhcc---
Confidence 35677777777764 344433 2222333 345678999999988888752 23333333 2222
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhh-------
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRD------- 158 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~------- 158 (220)
.+.|...|+++++ +.|.+|...- .+ ..+...++.++|+..-++++...-.....
T Consensus 127 ---------~~~A~~~~~~a~~-----~~~~~~~~~~-~~----~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 187 (275)
T 1xnf_A 127 ---------DKLAQDDLLAFYQ-----DDPNDPFRSL-WL----YLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFY 187 (275)
T ss_dssp ---------HHHHHHHHHHHHH-----HCTTCHHHHH-HH----HHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHH-----hCCCChHHHH-HH----HHHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHH
Confidence 3678888888875 3577764321 11 11233578888887776665431100000
Q ss_pred -hhhhhhHHHHHhhcccccch------hHHHHHHHHHHHHHhhHHHHHHHHHHhHhcC
Q psy5989 159 -TKRSVCLLCEIFHTMSSSGE------KEELVQRAKLAEQAERYDDMAAAMKAVTETG 209 (220)
Q Consensus 159 -~~~d~~lilq~L~~~s~~s~------r~~~~~~akl~eq~ery~~m~~~~~~~~~~~ 209 (220)
...+-..-++.+........ -+-+..++.+-....+|++-....+++++.+
T Consensus 188 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 245 (275)
T 1xnf_A 188 LGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANN 245 (275)
T ss_dssp TTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCC
Confidence 00000011222222221111 2455677888888899999999988887754
No 104
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=73.73 E-value=27 Score=31.50 Aligned_cols=108 Identities=13% Similarity=0.144 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~ 85 (220)
.+.|...|++|++ +.|.++. ...|.+.. |.-+++.++|....++|+. ..+..+..+ ..++.
T Consensus 39 ~~~A~~~~~~al~-----~~p~~~~---~~~~lg~~-~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~-- 107 (568)
T 2vsy_A 39 TTAGEMAVQRGLA-----LHPGHPE---AVARLGRV-RWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQA-- 107 (568)
T ss_dssp HHHHHHHHHHHHT-----TSTTCHH---HHHHHHHH-HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH--
T ss_pred HHHHHHHHHHHHH-----hCCCCHH---HHHHHHHH-HHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCH--
Confidence 3466666766654 4455542 23344443 4567899999998888865 233444444 22222
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHh---cChHHHHHHHHHHHHH
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEII---NSPARACHLAKQVKYS 151 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl---~~~~~A~~iAk~Afde 151 (220)
+.|...|++|+++ .|.+|. ...|.+..+.. + ++.++|....+++++.
T Consensus 108 ----------~~A~~~~~~al~~-----~p~~~~---~~~~l~~~~~~-~~~~g~~~~A~~~~~~al~~ 157 (568)
T 2vsy_A 108 ----------EAAAAAYTRAHQL-----LPEEPY---ITAQLLNWRRR-LCDWRALDVLSAQVRAAVAQ 157 (568)
T ss_dssp ----------HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCCTTHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-hhccccHHHHHHHHHHHHhc
Confidence 7888889988864 455553 33455555544 5 8888888777776543
No 105
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=73.58 E-value=31 Score=27.16 Aligned_cols=169 Identities=8% Similarity=0.033 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHH---hhcChHHHHHHHHHHHH----HHHHHHHHhc-CCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYE---ILNSPDKACQLAKQVCA----HYFCFYFFLM-NDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yE---Il~~~~~A~~lAk~A~~----d~~~~~~~~~-~~~e~~ 85 (220)
.+.|...|++|.+.. +|. ...|.+..|+. +.++.++|+..-++|+. ..+..+..+- .+..
T Consensus 58 ~~~A~~~~~~a~~~~-------~~~---a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~-- 125 (273)
T 1ouv_A 58 LKKAASFYAKACDLN-------YSN---GCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKV-- 125 (273)
T ss_dssp HHHHHHHHHHHHHTT-------CHH---HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSS--
T ss_pred HHHHHHHHHHHHHCC-------CHH---HHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcCCccHHHHHHHHHHcCCC--
Confidence 456788888887641 221 12233444443 38899999988887754 3444455542 1100
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHH---HhcChHHHHHHHHHHHHHH----HHhhhh
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYE---IINSPARACHLAKQVKYSC----IGASRD 158 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yE---Il~~~~~A~~iAk~AfdeA----i~eld~ 158 (220)
...-.++|...|++|++. . +| ....|.+..|.. +.+++++|+..-++|.+.. ...+-.
T Consensus 126 -----~~~~~~~A~~~~~~a~~~-----~--~~---~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~ 190 (273)
T 1ouv_A 126 -----VTRDFKKAVEYFTKACDL-----N--DG---DGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGN 190 (273)
T ss_dssp -----SCCCHHHHHHHHHHHHHT-----T--CH---HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred -----cccCHHHHHHHHHHHHhc-----C--cH---HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 011137888999988863 1 11 123445555555 4789999998888876531 111111
Q ss_pred hh-------hhhhHHHHHhhcccccchhHHHHHHHHHHHH----HhhHHHHHHHHHHhHhcC
Q psy5989 159 TK-------RSVCLLCEIFHTMSSSGEKEELVQRAKLAEQ----AERYDDMAAAMKAVTETG 209 (220)
Q Consensus 159 ~~-------~d~~lilq~L~~~s~~s~r~~~~~~akl~eq----~ery~~m~~~~~~~~~~~ 209 (220)
+| .|-..-++.+..-.....-+-...++.+-.+ ...|++-....++.++.|
T Consensus 191 ~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~ 252 (273)
T 1ouv_A 191 MYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 252 (273)
T ss_dssp HHHHTCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHT
T ss_pred HHHcCCCCCccHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcC
Confidence 11 1111222222222222334455666666666 666777777777776655
No 106
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=73.07 E-value=8.4 Score=34.56 Aligned_cols=88 Identities=14% Similarity=-0.020 Sum_probs=50.9
Q ss_pred cChHHHHHHHHHHHHH------HHHHHHHhcCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhH
Q psy5989 55 NSPDKACQLAKQVCAH------YFCFYFFLMNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFS 128 (220)
Q Consensus 55 ~~~~~A~~lAk~A~~d------~~~~~~~~~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~S 128 (220)
++.++|....++|+.. .+..+..+.....|.. . ....-.+.|..+|++|+.+ .|.+|-......|.+
T Consensus 193 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~-~-~~~g~~~~A~~~~~~al~~-----~p~~~~~~~~~~~lg 265 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNT-G-QNPKISQQALSAYAQAEKV-----DRKASSNPDLHLNRA 265 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHT-T-CCHHHHHHHHHHHHHHHHH-----CGGGGGCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhh-c-cccchHHHHHHHHHHHHHh-----CCCcccCHHHHHHHH
Confidence 7788888888887642 2222222211000000 0 0123457888999998865 342234555667777
Q ss_pred HHHHHHhcChHHHHHHHHHHHH
Q psy5989 129 VFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 129 VF~yEIl~~~~~A~~iAk~Afd 150 (220)
..|+. +++.++|+...++|+.
T Consensus 266 ~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 266 TLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHH-cCCHHHHHHHHHHHHH
Confidence 77666 6898888877776654
No 107
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.03 E-value=20 Score=24.76 Aligned_cols=84 Identities=15% Similarity=0.141 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccc
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSS 175 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~ 175 (220)
+.|...|+++++ +.|.+|....+..|.+..++. .++.++|+...++++... .+
T Consensus 45 ~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~--------~~------------- 97 (148)
T 2dba_A 45 GGALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIEKD--------GG------------- 97 (148)
T ss_dssp HHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHT--------SC-------------
T ss_pred HHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhhC--------cc-------------
Confidence 677888888774 567766556666777766655 688888888777765431 00
Q ss_pred cchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 176 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 176 ~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
.-.-+..++.+..+..+|++-....+++++.
T Consensus 98 --~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 98 --DVKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 0122344555556667777777777666654
No 108
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=72.55 E-value=24 Score=25.34 Aligned_cols=81 Identities=14% Similarity=0.121 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccc
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSS 175 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~ 175 (220)
+.|.+.|++|+++ .|.+|. +..|.+.-++. +++.++|+...++|+. ++..+
T Consensus 30 ~~A~~~~~~al~~-----~p~~~~---~~~~~~~~~~~-~~~~~~A~~~~~~al~-----~~p~~--------------- 80 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENAI---LYSNRAACLTK-LMEFQRALDDCDTCIR-----LDSKF--------------- 80 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH-----HCTTC---------------
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHhhHHHh-hccHHHHHHHHHHHHH-----hhhhh---------------
Confidence 7899999999864 466654 44566666665 6898888877666553 22111
Q ss_pred cchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 176 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 176 ~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
-+-+..++.+-.+..+|++-....+++++.
T Consensus 81 ---~~a~~~lg~~~~~~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 81 ---IKGYIRKAACLVAMREWSKAQRAYEDALQV 110 (126)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 123556677777778888888888888774
No 109
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=72.49 E-value=50 Score=29.00 Aligned_cols=107 Identities=8% Similarity=-0.026 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH-------------HHHHHHHh--
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH-------------YFCFYFFL-- 78 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d-------------~~~~~~~~-- 78 (220)
.+.|.+.|+++.++ .|.+|. +++.-...|--.++.++|..+-++++.. .+..+..+
T Consensus 457 ~~~A~~~~~~~~~~-----~~~~~~----~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~ 527 (597)
T 2xpi_A 457 ILLANEYLQSSYAL-----FQYDPL----LLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYR 527 (597)
T ss_dssp HHHHHHHHHHHHHH-----CCCCHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCChH----HHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHH
Confidence 45666667666543 344553 2333344555688999999988887653 23333333
Q ss_pred cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 79 MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 79 ~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
..++ .+.|...|++++++ .|.+|. ...+.+.. |.-.++.++|....+++++
T Consensus 528 ~~g~------------~~~A~~~~~~~~~~-----~p~~~~---~~~~l~~~-~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 528 KLKM------------YDAAIDALNQGLLL-----STNDAN---VHTAIALV-YLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HTTC------------HHHHHHHHHHHHHH-----SSCCHH---HHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HhcC------------HHHHHHHHHHHHHh-----CCCChH---HHHHHHHH-HHHhCCHHHHHHHHHHHHh
Confidence 2222 37788888888764 365653 22333333 4457999998888777664
No 110
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=71.57 E-value=8.2 Score=30.95 Aligned_cols=55 Identities=22% Similarity=0.211 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccc-----cccchhHHHHHhhcChHHHHHHHHHHHHH
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLG-----LALNFSVFYYEILNSPDKACQLAKQVCAH 70 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLG-----LaLN~SVF~yEIl~~~~~A~~lAk~A~~d 70 (220)
-+.|..+|++|+++.-. .++..++.+. .-.|-+ ..+.-+++.++|+....+|+.-
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g-~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLA-EALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHH-HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHh
Confidence 46789999999987643 2222221111 223332 2344678899999998888764
No 111
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=71.30 E-value=39 Score=28.57 Aligned_cols=50 Identities=14% Similarity=0.138 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCc------------cccccccchhHHHHHhhcChHHHHHHHHHHHH
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHP------------IRLGLALNFSVFYYEILNSPDKACQLAKQVCA 69 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~P------------irLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~ 69 (220)
.+.|...|++|+++. |.++ .+..+.+|.+.-| --+++.++|+...++|+.
T Consensus 163 ~~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~~~~~~nla~~~-~~~g~~~~A~~~~~~al~ 224 (336)
T 1p5q_A 163 YKQALLQYKKIVSWL-----EYESSFSNEEAQKAQALRLASHLNLAMCH-LKLQAFSAAIESCNKALE 224 (336)
T ss_dssp HHHHHHHHHHHHHHT-----TTCCCCCSHHHHHHHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-----hccccCChHHHHHHHHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHH
Confidence 457888888888753 3332 2233344444433 345666666666666653
No 112
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=70.67 E-value=38 Score=26.90 Aligned_cols=139 Identities=7% Similarity=-0.043 Sum_probs=77.4
Q ss_pred HHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcch
Q psy5989 49 FYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIR 120 (220)
Q Consensus 49 F~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~Pir 120 (220)
..|.-.++.++|....++++. ..+..+..+ ..++. +.|...|+++++ +.|.+|
T Consensus 128 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~A~~~~~~~~~-----~~~~~~-- 188 (359)
T 3ieg_A 128 LDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEP------------RKAISDLKAASK-----LKSDNT-- 188 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHT-----TCSCCH--
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCH------------HHHHHHHHHHHH-----hCCCCH--
Confidence 455677888888888887754 233333333 22222 567777777763 455555
Q ss_pred hcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhh-----------------------h-hhhhhhhHHHHHhhccccc
Q psy5989 121 LGLALNFSVFYYEIINSPARACHLAKQVKYSCIGAS-----------------------R-DTKRSVCLLCEIFHTMSSS 176 (220)
Q Consensus 121 LGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~el-----------------------d-~~~~d~~lilq~L~~~s~~ 176 (220)
....+.+..++. .++.++|....++++...-... . .-+.++..+++.......-
T Consensus 189 -~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 266 (359)
T 3ieg_A 189 -EAFYKISTLYYQ-LGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS 266 (359)
T ss_dssp -HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS
T ss_pred -HHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 344556665555 6899998888877764211100 0 1122232222222221111
Q ss_pred ch---hHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 177 GE---KEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 177 s~---r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
.. -.-+..++.+..+..+|++-....+++++.
T Consensus 267 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 267 VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQM 301 (359)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 00 022445777777888888888888887764
No 113
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=70.64 E-value=17 Score=27.28 Aligned_cols=73 Identities=11% Similarity=0.106 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH----------------------HH
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA----------------------HY 71 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~----------------------d~ 71 (220)
.+.|...|++|+.+ .|.+| ....|.+.-| --+++.++|+..-++++. ..
T Consensus 53 ~~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~-~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (213)
T 1hh8_A 53 MTEAEKAFTRSINR-----DKHLA---VAYFQRGMLY-YQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEV 123 (213)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHH-HHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHH
T ss_pred HHHHHHHHHHHHHh-----Cccch---HHHHHHHHHH-HHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHH
Confidence 45778888888764 34444 2233444443 458899999999999887 66
Q ss_pred HHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHH
Q psy5989 72 FCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFD 107 (220)
Q Consensus 72 ~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~e 107 (220)
+..+..+ ..++. +.|...|+.|++
T Consensus 124 ~~~l~~~~~~~g~~------------~~A~~~~~~al~ 149 (213)
T 1hh8_A 124 LYNIAFMYAKKEEW------------KKAEEQLALATS 149 (213)
T ss_dssp HHHHHHHHHHTTCH------------HHHHHHHHHHHT
T ss_pred HHHHHHHHHHccCH------------HHHHHHHHHHHH
Confidence 6666665 23333 677888888774
No 114
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=68.73 E-value=24 Score=31.53 Aligned_cols=54 Identities=15% Similarity=0.150 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCC--------CCccccccccchhHHHHHhhcChHHHHHHHHHHHH
Q psy5989 14 VDDSQKAYQQAFEISKSKMQP--------THPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA 69 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~p--------t~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~ 69 (220)
-+.|...|++|+++.... +. .+|.+..+.+|.+.-|+ -+++.++|+...++|+.
T Consensus 284 ~~~A~~~y~~Al~~~p~~-~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 284 YMQAVIQYGKIVSWLEME-YGLSEKESKASESFLLAAFLNLAMCYL-KLREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHHTTC-CSCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccc-ccCChHHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHh
Confidence 457888888888754211 00 12233444455544333 45667777766666653
No 115
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=68.50 E-value=23 Score=23.59 Aligned_cols=53 Identities=8% Similarity=0.077 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|++++.+... .++.++.......+.+..++. .++.++|...-++++.
T Consensus 55 ~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 6788888888887652 344444434455666666655 6898888777666654
No 116
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=68.45 E-value=30 Score=24.79 Aligned_cols=93 Identities=12% Similarity=0.014 Sum_probs=56.8
Q ss_pred ccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHH
Q psy5989 37 PIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDI 108 (220)
Q Consensus 37 PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~ei 108 (220)
|-......+.++.++ -.++.++|+...++++. +++..+..+ ..++. +.|..+|++|+.+
T Consensus 15 p~~~~~~~~~a~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~------------~~A~~~~~~al~~ 81 (142)
T 2xcb_A 15 EDTLEQLYALGFNQY-QAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLY------------EQALQSYSYGALM 81 (142)
T ss_dssp HHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhH------------HHHHHHHHHHHhc
Confidence 333333444444444 46888999988887753 233333333 22333 7888999988863
Q ss_pred HHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHH
Q psy5989 109 AKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYS 151 (220)
Q Consensus 109 A~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afde 151 (220)
.|.+|.- .+|.+..++. +++.++|+..-++++.-
T Consensus 82 -----~p~~~~~---~~~lg~~~~~-~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 82 -----DINEPRF---PFHAAECHLQ-LGDLDGAESGFYSARAL 115 (142)
T ss_dssp -----CTTCTHH---HHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred -----CCCCcHH---HHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5777753 3555555554 79999988777666543
No 117
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=68.02 E-value=33 Score=25.13 Aligned_cols=106 Identities=10% Similarity=0.086 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCC
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSP 86 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~ 86 (220)
+.|...++.+.. ..|.+|.- ..+.+ ..+...++.+.|....++++. +.+..+..+ ..++.
T Consensus 56 ~~a~~~~~~~~~-----~~~~~~~~---~~~~~-~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~--- 123 (184)
T 3vtx_A 56 NDAIESLKKFVV-----LDTTSAEA---YYILG-SANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEH--- 123 (184)
T ss_dssp HHHHHHHHHHHH-----HCCCCHHH---HHHHH-HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH---
T ss_pred HHHHHHHHHHHh-----cCchhHHH---HHHHH-HHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCc---
Confidence 345555555543 34444432 22222 334566788888888777764 233333333 22222
Q ss_pred CccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 87 LFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 87 ~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
++|.+.|++++++ .|.+|. ...|.+..|+. +++.++|+..-++|++
T Consensus 124 ---------~~A~~~~~~~l~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 124 ---------DKAIEAYEKTISI-----KPGFIR---AYQSIGLAYEG-KGLRDEAVKYFKKALE 169 (184)
T ss_dssp ---------HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred ---------hhHHHHHHHHHHh-----cchhhh---HHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 7888889988864 466553 34455555544 7999998887776653
No 118
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=66.28 E-value=31 Score=24.26 Aligned_cols=78 Identities=8% Similarity=-0.112 Sum_probs=44.2
Q ss_pred HhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcc
Q psy5989 52 EILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGL 123 (220)
Q Consensus 52 EIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL 123 (220)
-..++.++|....++++. ..+..+..+ ..++. +.|...|++++.+ .|.+|. .
T Consensus 24 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~------------~~A~~~~~~a~~~-----~~~~~~---~ 83 (166)
T 1a17_A 24 FKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECY------------GYALGDATRAIEL-----DKKYIK---G 83 (166)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHHH-----CTTCHH---H
T ss_pred HHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCH------------HHHHHHHHHHHHh-----CcccHH---H
Confidence 346677777777666653 222222332 22222 6778888888764 355442 3
Q ss_pred cchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 124 ALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 124 ~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
..+.+..++. +++.++|+...++++.
T Consensus 84 ~~~~a~~~~~-~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 84 YYRRAASNMA-LGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 3455555444 6888888776666553
No 119
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=65.88 E-value=26 Score=23.07 Aligned_cols=80 Identities=14% Similarity=0.126 Sum_probs=46.2
Q ss_pred HHHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchh
Q psy5989 50 YYEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRL 121 (220)
Q Consensus 50 ~yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirL 121 (220)
.|...++.++|..+.++++.. .+..+..+ ..++ .+.|...|++++.+ .|.+|.
T Consensus 18 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~------------~~~A~~~~~~~~~~-----~~~~~~-- 78 (125)
T 1na0_A 18 AYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGD------------YDEAIEYYQKALEL-----DPNNAE-- 78 (125)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHH-----CTTCHH--
T ss_pred HHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCC------------HHHHHHHHHHHHHh-----CCccHH--
Confidence 445577888888877777542 22222322 1222 26677778777653 344442
Q ss_pred cccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 122 GLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 122 GL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
...+.+..++. .++.++|....++++.
T Consensus 79 -~~~~la~~~~~-~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 79 -AWYNLGNAYYK-QGDYDEAIEYYQKALE 105 (125)
T ss_dssp -HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 33455555554 6888888777666554
No 120
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=65.66 E-value=37 Score=24.92 Aligned_cols=86 Identities=9% Similarity=0.006 Sum_probs=52.9
Q ss_pred ccchhHHHHHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCC
Q psy5989 43 ALNFSVFYYEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQ 114 (220)
Q Consensus 43 aLN~SVF~yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~ 114 (220)
..+.++.++ -.++.++|+..-++++.. ++..+..+ ..++. +.|..+|++|+.+ .
T Consensus 24 ~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~------------~~A~~~~~~al~l-----~ 85 (148)
T 2vgx_A 24 LYSLAFNQY-QSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQY------------DLAIHSYSYGAVM-----D 85 (148)
T ss_dssp HHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHHH-----S
T ss_pred HHHHHHHHH-HcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhH------------HHHHHHHHHHHhc-----C
Confidence 344444444 458889998888777542 33333333 22333 7888999988864 5
Q ss_pred CCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 115 PTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 115 pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
|.||. ..+|.++.+.. +++.++|+..-++++.
T Consensus 86 p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~ 117 (148)
T 2vgx_A 86 IXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQE 117 (148)
T ss_dssp TTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred CCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 77764 33566666555 7998888766655543
No 121
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=65.19 E-value=16 Score=25.33 Aligned_cols=47 Identities=11% Similarity=0.266 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYS 151 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afde 151 (220)
+.|...|++|+++ .|.+| .+..|.+.-++. +++.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNHQ---ALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 7788888888754 46654 344566666555 68999988887777654
No 122
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=64.40 E-value=57 Score=26.55 Aligned_cols=128 Identities=9% Similarity=0.013 Sum_probs=73.9
Q ss_pred HHHhhcChHHHHHHHHHHHHH------------HHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCC
Q psy5989 50 YYEILNSPDKACQLAKQVCAH------------YFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQP 115 (220)
Q Consensus 50 ~yEIl~~~~~A~~lAk~A~~d------------~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~p 115 (220)
.|...++.++|+..-++|+.- .+..+..+ ..++ .+.|..+|++|+++... .
T Consensus 46 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~------------~~~A~~~~~~Al~l~~~---~ 110 (292)
T 1qqe_A 46 IYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGN------------SVNAVDSLENAIQIFTH---R 110 (292)
T ss_dssp HHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHHHHH---T
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCC------------HHHHHHHHHHHHHHHHH---c
Confidence 355678888888877776543 23333333 2222 27889999999998764 1
Q ss_pred CCcchhcccc-hhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccccchhHHHHHHHHHHHHHhh
Q psy5989 116 THPIRLGLAL-NFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSSSGEKEELVQRAKLAEQAER 194 (220)
Q Consensus 116 t~PirLGL~L-N~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~~s~r~~~~~~akl~eq~er 194 (220)
-+|...+.++ |.+..|...++++++|+..-++|..-.-..- +.. ..-+-+..++.+--+..+
T Consensus 111 g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~-----~~~------------~~~~~~~~lg~~~~~~g~ 173 (292)
T 1qqe_A 111 GQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ-----SVA------------LSNKCFIKCADLKALDGQ 173 (292)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT-----CHH------------HHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCC-----ChH------------HHHHHHHHHHHHHHHhCC
Confidence 2343333333 4454444435999999887777654221100 000 001123445666666788
Q ss_pred HHHHHHHHHHhHhcC
Q psy5989 195 YDDMAAAMKAVTETG 209 (220)
Q Consensus 195 y~~m~~~~~~~~~~~ 209 (220)
|++-+...+++++..
T Consensus 174 ~~~A~~~~~~al~~~ 188 (292)
T 1qqe_A 174 YIEASDIYSKLIKSS 188 (292)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888877777643
No 123
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=63.83 E-value=37 Score=24.19 Aligned_cols=87 Identities=10% Similarity=0.152 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccc
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSS 175 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~ 175 (220)
+.|...|++|+++ .|.+|. ...|.+.-|+. +++.++|+...++|+.-.-.... +-..+...
T Consensus 25 ~~A~~~y~~Al~~-----~p~~~~---~~~nlg~~~~~-~~~~~~A~~~~~~al~~~~~~~~----~~~~~a~~------ 85 (127)
T 4gcn_A 25 EKAHVHYDKAIEL-----DPSNIT---FYNNKAAVYFE-EKKFAECVQFCEKAVEVGRETRA----DYKLIAKA------ 85 (127)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTC----CHHHHHHH------
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHhHHHHHHH-hhhHHHHHHHHHHHHHhCcccch----hhHHHHHH------
Confidence 8899999999964 566654 44567777666 79999998887777653221111 11111111
Q ss_pred cchhHHHHHHHHHHHHHhhHHHHHHHHHHhHh
Q psy5989 176 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTE 207 (220)
Q Consensus 176 ~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~ 207 (220)
+..++..-+...+|++-+.+.++.++
T Consensus 86 ------~~~lg~~~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 86 ------MSRAGNAFQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp ------HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 22344445556677777766666554
No 124
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=63.60 E-value=27 Score=22.58 Aligned_cols=84 Identities=13% Similarity=0.089 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccc
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSS 175 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~ 175 (220)
+.|...|++++++ .|.++ ....|.+..++. .++.++|+...++++.. -.+ .
T Consensus 23 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~----~~~-~--------------- 73 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEES---KYWLMKGKALYN-LERYEEAVDCYNYVINV----IED-E--------------- 73 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHT----SCC-T---------------
T ss_pred HHHHHHHHHHHHh-----CcCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHHh----Ccc-c---------------
Confidence 6777788887753 34443 334566666555 67888877766655432 101 0
Q ss_pred cchhHHHHHHHHHHHHH-hhHHHHHHHHHHhHhcC
Q psy5989 176 SGEKEELVQRAKLAEQA-ERYDDMAAAMKAVTETG 209 (220)
Q Consensus 176 ~s~r~~~~~~akl~eq~-ery~~m~~~~~~~~~~~ 209 (220)
..-+-...++.+..+. .+|++-..+++++++.+
T Consensus 74 -~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~ 107 (112)
T 2kck_A 74 -YNKDVWAAKADALRYIEGKEVEAEIAEARAKLEH 107 (112)
T ss_dssp -TCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGC
T ss_pred -chHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcc
Confidence 0123345667777778 88999999999888764
No 125
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=63.39 E-value=69 Score=27.16 Aligned_cols=117 Identities=9% Similarity=-0.047 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHHHHH---------------HHHHh--cC
Q psy5989 18 QKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAHYFC---------------FYFFL--MN 80 (220)
Q Consensus 18 ~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d~~~---------------~~~~~--~~ 80 (220)
....++.+......+++.++.+ +.|.==+.|-.+++.++|+..-++|+.-.-. .++.+ .-
T Consensus 31 l~~~e~~~~~~~~~~~~~~~a~---~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~ 107 (472)
T 4g1t_A 31 LDDFEDKVFYRTEFQNREFKAT---MCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHM 107 (472)
T ss_dssp HHHHHHHHHHHTTSCC---CCH---HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCChhHHH---HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHc
Confidence 3445555555544455544432 3332223456789999999988888653221 11111 11
Q ss_pred CCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHH-HHHHHhcChHHHHHHHHHHH
Q psy5989 81 DPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSV-FYYEIINSPARACHLAKQVK 149 (220)
Q Consensus 81 ~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SV-F~yEIl~~~~~A~~iAk~Af 149 (220)
|+ .++|...|++++++.+....|.+|-.-.+..|.+. +.+--.++.++|+..-++|+
T Consensus 108 g~------------~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal 165 (472)
T 4g1t_A 108 GR------------LSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKAL 165 (472)
T ss_dssp TC------------HHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHH
T ss_pred CC------------hHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHH
Confidence 12 37889999999999887666666644333223221 11111234566655544443
No 126
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=60.74 E-value=73 Score=26.62 Aligned_cols=94 Identities=11% Similarity=0.120 Sum_probs=61.6
Q ss_pred HHHHhhcChHHHHHHHHHHHHH-----------H-HHHHHHhcCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy5989 49 FYYEILNSPDKACQLAKQVCAH-----------Y-FCFYFFLMNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPT 116 (220)
Q Consensus 49 F~yEIl~~~~~A~~lAk~A~~d-----------~-~~~~~~~~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt 116 (220)
-.|.-.+++++|...-+.+..- . ...+..+.... .-.+.+...|+.+++++... ..
T Consensus 63 ~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~a~~~~~~~~~~~~~~--~~ 130 (434)
T 4b4t_Q 63 QLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVP----------DSLDDQIFVCEKSIEFAKRE--KR 130 (434)
T ss_dssp HHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCC----------SCHHHHHHHHHHHHHHHHHS--SC
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCC----------CCHHHHHHHHHHHHHHHHHh--Cc
Confidence 3455678888888766554331 1 11122221111 11367888999999988753 45
Q ss_pred CcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHh
Q psy5989 117 HPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGA 155 (220)
Q Consensus 117 ~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~e 155 (220)
++.|..+..|.+..|++ .++.++|..+-+++.......
T Consensus 131 ~~~~~~~~~~la~~~~~-~g~~~~A~~~l~~~~~~~~~~ 168 (434)
T 4b4t_Q 131 VFLKHSLSIKLATLHYQ-KKQYKDSLALINDLLREFKKL 168 (434)
T ss_dssp CSSHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHHHH-ccChHHHHHHHHHHHHHHHhc
Confidence 67788888888888777 689999999988877655443
No 127
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=59.69 E-value=49 Score=29.08 Aligned_cols=50 Identities=8% Similarity=-0.062 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHH-HHHHHHHHHHHH
Q psy5989 97 DSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARAC-HLAKQVKYSCIG 154 (220)
Q Consensus 97 ~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~-~iAk~AfdeAi~ 154 (220)
.|..+|++|++ +.|.|+.-+ .|.+.-+..+.+..++|+ .-+...|+.||.
T Consensus 218 eAl~~~~~al~-----l~P~~~~a~---~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~ 268 (382)
T 2h6f_A 218 NELQYVDQLLK-----EDVRNNSVW---NQRYFVISNTTGYNDRAVLEREVQYTLEMIK 268 (382)
T ss_dssp THHHHHHHHHH-----HCTTCHHHH---HHHHHHHHHTTCSCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----hCCCCHHHH---HHHHHHHHHhcCcchHHHHHHHHHHHHHHHH
Confidence 45666666654 345554322 334444445455546664 333355555554
No 128
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=58.25 E-value=81 Score=26.34 Aligned_cols=166 Identities=9% Similarity=0.053 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~ 85 (220)
.+.|...|+++++. .|.+|. +++.-.-.|--+++.++|....++++.. .+..+..+ ..++
T Consensus 42 ~~~A~~~~~~~l~~-----~p~~~~----~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~--- 109 (450)
T 2y4t_A 42 LADALSQFHAAVDG-----DPDNYI----AYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGK--- 109 (450)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH----HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHh-----CCccHH----HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCC---
Confidence 45677777777653 444432 2222222345678999999988887642 33333333 2222
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCc---chhccc---------chhHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHP---IRLGLA---------LNFSVFYYEIINSPARACHLAKQVKYSCI 153 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~P---irLGL~---------LN~SVF~yEIl~~~~~A~~iAk~AfdeAi 153 (220)
.+.|...|+++++ +.|.++ .-+... .+.+..++ -.++.++|+...+++....-
T Consensus 110 ---------~~~A~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~ 174 (450)
T 2y4t_A 110 ---------LDEAEDDFKKVLK-----SNPSENEEKEAQSQLIKSDEMQRLRSQALNAF-GSGDYTAAIAFLDKILEVCV 174 (450)
T ss_dssp ---------HHHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCT
T ss_pred ---------HHHHHHHHHHHHh-----cCCCChhhHHHHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCC
Confidence 2677788887763 567666 322111 12233333 36888888888777764211
Q ss_pred Hhhh------------hhhhhhhHHHH-HhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 154 GASR------------DTKRSVCLLCE-IFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 154 ~eld------------~~~~d~~lilq-~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
...+ .-+.++..+++ .+.... ..-.-+..++.+..+..+|++-+...+++++.
T Consensus 175 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~--~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 240 (450)
T 2y4t_A 175 WDAELRELRAECFIKEGEPRKAISDLKAASKLKN--DNTEAFYKISTLYYQLGDHELSLSEVRECLKL 240 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHC--SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 1111 11222222222 221111 22345667788888888899988888887654
No 129
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=58.19 E-value=50 Score=29.63 Aligned_cols=146 Identities=17% Similarity=0.157 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC--CCCCCCccc--cHHHHHHHHHH---------------HHHHHH-HHHhcCCCCCcc
Q psy5989 60 ACQLAKQVCAHYFCFYFFLMND--PEFSPLFPC--SLAVVEDSQKA---------------YQEAFD-IAKSKMQPTHPI 119 (220)
Q Consensus 60 A~~lAk~A~~d~~~~~~~~~~~--~e~~~~~~~--k~~~~e~a~~a---------------Yq~A~e-iA~~~L~pt~Pi 119 (220)
+-+.|++-+..++.++..+... +.|-+.+++ |. ++..+--+ |..-.. +-+..-.|.-|-
T Consensus 151 ~~~ta~kmi~qa~~~l~~Laqk~~e~~t~~tld~~rp-l~~lS~yl~~~~~~~SE~flldvc~~~t~l~lks~~d~nTpa 229 (346)
T 3qtm_A 151 VTQLVNPYIEKAIQYLRPLAQDSTEYFDALTPDSLRP-LYILSSYLFQFGDQFSEAFLLDVCSIITALWLKSVVDPNTPA 229 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTSCCCTTCCTTTTTT-HHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHTTCSTTSCH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhChhhccccccchhhH-HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhccCChh
Confidence 4677888888888888888433 444445444 21 11111111 221111 123334455555
Q ss_pred hh------cc---cchhHHHHHHHhcChH----HHHHHHHHHHHHHHHhhhhhh---hhhhHHHHHhhcccccchhHHHH
Q psy5989 120 RL------GL---ALNFSVFYYEIINSPA----RACHLAKQVKYSCIGASRDTK---RSVCLLCEIFHTMSSSGEKEELV 183 (220)
Q Consensus 120 rL------GL---~LN~SVF~yEIl~~~~----~A~~iAk~AfdeAi~eld~~~---~d~~lilq~L~~~s~~s~r~~~~ 183 (220)
.- |+ .-|++=+|-+.+.|-+ .+++.|++-+..||...+-+| ++.-+++..-..|.
T Consensus 230 ~~kl~Aq~av~t~~t~vAeyy~DLlDd~es~vdd~~~kA~~~L~~aid~~~~~y~ldk~~e~l~~lAd~km--------- 300 (346)
T 3qtm_A 230 YYKLIAQEAVLNNYTTFAEYYMDLLDNSESNVDDLINKASSWLNNSVDTWNVIYTLDKSPERLLKLADIKM--------- 300 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC----CHHHHHHHHHHHHHHHHHHHHHHHHSCCGGGHHHHHHHHH---------
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHH---------
Confidence 31 22 3456778888887654 789999999999999888666 33345554444343
Q ss_pred HHHHH----HHHHhhHHHHHHHHHHhHhcCceecee
Q psy5989 184 QRAKL----AEQAERYDDMAAAMKAVTETGVEYGIY 215 (220)
Q Consensus 184 ~~akl----~eq~ery~~m~~~~~~~~~~~~el~~~ 215 (220)
++|.| ..|-..|.|-++++++.-.+|++|+-+
T Consensus 301 dlan~~~~Ed~Qdk~l~EA~~~ireAq~~Gv~l~~d 336 (346)
T 3qtm_A 301 DLAQIVQDEASQDNYLKEACNAIKEAQGSGVELSPD 336 (346)
T ss_dssp HHHHHCSCHHHHHHHHHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHccChhhHHHHHHHHHHHHHHHHhcCCCCChH
Confidence 44555 567889999999999999999999754
No 130
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=57.84 E-value=51 Score=23.86 Aligned_cols=46 Identities=9% Similarity=-0.062 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|+.|+++ .|.+|- ..++.+.-++. +++.++|+..-++++.
T Consensus 80 ~~A~~~~~~al~~-----~p~~~~---a~~~~g~~~~~-~g~~~~A~~~~~~al~ 125 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNEK---ALFRRAKARIA-AWKLDEAEEDLKLLLR 125 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcchH---HHHHHHHHHHH-HhcHHHHHHHHHHHHh
Confidence 5677777777754 466652 33444444444 6888888776666543
No 131
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=57.77 E-value=79 Score=26.07 Aligned_cols=17 Identities=6% Similarity=-0.187 Sum_probs=8.8
Q ss_pred HhhcChHHHHHHHHHHH
Q psy5989 52 EILNSPDKACQLAKQVC 68 (220)
Q Consensus 52 EIl~~~~~A~~lAk~A~ 68 (220)
.-.++.++|...-++++
T Consensus 180 ~~~g~~~~A~~~~~~al 196 (388)
T 1w3b_A 180 NAQGEIWLAIHHFEKAV 196 (388)
T ss_dssp HTTTCHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHH
Confidence 34455555555555543
No 132
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=57.03 E-value=69 Score=25.11 Aligned_cols=29 Identities=7% Similarity=0.018 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 180 EELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 180 ~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
+-+..++.+.....+|++-....+++++.
T Consensus 207 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 235 (327)
T 3cv0_A 207 QLWNKLGATLANGNRPQEALDAYNRALDI 235 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 44566777777777888877777776654
No 133
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=57.01 E-value=66 Score=24.89 Aligned_cols=83 Identities=6% Similarity=-0.006 Sum_probs=45.8
Q ss_pred hhcChHHHHHHHHHHH--------HHHHHHHHHh-cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcc
Q psy5989 53 ILNSPDKACQLAKQVC--------AHYFCFYFFL-MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGL 123 (220)
Q Consensus 53 Il~~~~~A~~lAk~A~--------~d~~~~~~~~-~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL 123 (220)
+..+.++|...-++|. ...+..+..+ ..+.. -..-.++|...|++|.+. |-+|. -
T Consensus 101 ~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g-------~~~d~~~A~~~~~~A~~~------~~~~~---a 164 (212)
T 3rjv_A 101 GATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVH-------GPEDDVKASEYFKGSSSL------SRTGY---A 164 (212)
T ss_dssp SSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSS-------SSCCHHHHHHHHHHHHHT------SCTTH---H
T ss_pred CccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCC-------CCCCHHHHHHHHHHHHHc------CCCHH---H
Confidence 4567777777766654 3444444444 22111 011236777778777642 22332 2
Q ss_pred cchhHHHHHH-----HhcChHHHHHHHHHHHHH
Q psy5989 124 ALNFSVFYYE-----IINSPARACHLAKQVKYS 151 (220)
Q Consensus 124 ~LN~SVF~yE-----Il~~~~~A~~iAk~Afde 151 (220)
..|.+++|.. +..|+++|+..-++|.+.
T Consensus 165 ~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~ 197 (212)
T 3rjv_A 165 EYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLE 197 (212)
T ss_dssp HHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHc
Confidence 3556666665 344788887777776554
No 134
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=56.39 E-value=54 Score=23.75 Aligned_cols=77 Identities=12% Similarity=0.011 Sum_probs=44.2
Q ss_pred hhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhccc
Q psy5989 53 ILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLA 124 (220)
Q Consensus 53 Il~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~ 124 (220)
-.++.++|+..-++++. .++..+..+ ..++. +.|...|++|+++ .|.+| ...
T Consensus 23 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~------------~~A~~~~~~al~~-----~p~~~---~~~ 82 (164)
T 3sz7_A 23 ARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQH------------EKAAEDAELATVV-----DPKYS---KAW 82 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHHH-----CTTCH---HHH
T ss_pred HcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCH------------HHHHHHHHHHHHh-----CCCCH---HHH
Confidence 45666777666666653 233333333 22233 6778888888764 35554 333
Q ss_pred chhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 125 LNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 125 LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
.|.+.-++. +++.++|+..-++++.
T Consensus 83 ~~lg~~~~~-~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 83 SRLGLARFD-MADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 455555554 6888887776666554
No 135
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=55.78 E-value=1.1e+02 Score=27.10 Aligned_cols=118 Identities=9% Similarity=-0.036 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH-----HHHHHHHHhcCCCCCCCCcc
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA-----HYFCFYFFLMNDPEFSPLFP 89 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~-----d~~~~~~~~~~~~e~~~~~~ 89 (220)
+.|...|++|+++ .|.+|- ...+.+. .|.-.++.++|....++|+. ..+..+..+..... .....
T Consensus 120 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~-~~~~~g~~~~A~~~~~~al~~~p~~~~~~~lg~~~~~~~-~~~~~ 189 (474)
T 4abn_A 120 PEAEVLLSKAVKL-----EPELVE---AWNQLGE-VYWKKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQLQ-TDSGD 189 (474)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHH-HHHHHTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCC-CSCHH
T ss_pred HHHHHHHHHHHhh-----CCCCHH---HHHHHHH-HHHHcCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhc-cCChh
Confidence 5677888888764 344442 1222233 34457889999988888764 45555555533310 00111
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHH-----h--cChHHHHHHHHHHHH
Q psy5989 90 CSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEI-----I--NSPARACHLAKQVKY 150 (220)
Q Consensus 90 ~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEI-----l--~~~~~A~~iAk~Afd 150 (220)
.+..-.+.|...|++|+++ .|.+|.- ..|.+..+... . ++.++|+..-++|+.
T Consensus 190 ~~~g~~~~A~~~~~~al~~-----~p~~~~~---~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 249 (474)
T 4abn_A 190 EHSRHVMDSVRQAKLAVQM-----DVLDGRS---WYILGNAYLSLYFNTGQNPKISQQALSAYAQAEK 249 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----CTTCHHH---HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHh-----CCCCHHH---HHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 2335567889999998864 4666543 23444444432 0 556666665555544
No 136
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=53.93 E-value=70 Score=28.09 Aligned_cols=107 Identities=7% Similarity=0.015 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhc-ChHHHHHHHHHHHH------HHHHHHHHh--cCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILN-SPDKACQLAKQVCA------HYFCFYFFL--MNDPEF 84 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~-~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~ 84 (220)
.+.|+..|++|+. +.|.|+. ++++--..|.-++ +.++|+...++|+. ..+.++..+ ..++.
T Consensus 113 ~~~Al~~~~~al~-----l~P~~~~----a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~- 182 (382)
T 2h6f_A 113 SERAFKLTRDAIE-----LNAANYT----VWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDP- 182 (382)
T ss_dssp CHHHHHHHHHHHH-----HCTTCHH----HHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC-
T ss_pred hHHHHHHHHHHHH-----hCccCHH----HHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCH-
Confidence 4577888888775 4566654 2222222333456 49999999888876 344444444 22222
Q ss_pred CCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 85 SPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 85 ~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|..+|++|++ +.|.|+.-+ .|...- +.-+++.++|+...++++.
T Consensus 183 -----------~eAl~~~~kal~-----ldP~~~~a~---~~lg~~-~~~~g~~~eAl~~~~~al~ 228 (382)
T 2h6f_A 183 -----------SQELEFIADILN-----QDAKNYHAW---QHRQWV-IQEFKLWDNELQYVDQLLK 228 (382)
T ss_dssp -----------TTHHHHHHHHHH-----HCTTCHHHH---HHHHHH-HHHHTCCTTHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHH-----hCccCHHHH---HHHHHH-HHHcCChHHHHHHHHHHHH
Confidence 568899999986 457776432 223333 3336788888777766643
No 137
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=53.51 E-value=68 Score=24.02 Aligned_cols=49 Identities=20% Similarity=0.244 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcc-------------hhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPI-------------RLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~Pi-------------rLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|++|+.+ .|.+|- +..+..|.+..++. +++.++|+...++++.
T Consensus 55 ~~A~~~~~~al~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 55 NEAIVKYKEALDF-----FIHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHT-----TTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----HhcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 7888999998864 344551 12345566666555 6888888888877765
No 138
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=52.75 E-value=96 Score=25.50 Aligned_cols=46 Identities=13% Similarity=-0.021 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|+++++. .|.+|. +..|.++.+. -+++.++|...-++++.
T Consensus 183 ~eA~~~~~~~l~~-----~p~~~~---~~~~la~~~~-~~g~~~eA~~~l~~al~ 228 (291)
T 3mkr_A 183 QDAYYIFQEMADK-----CSPTLL---LLNGQAACHM-AQGRWEAAEGVLQEALD 228 (291)
T ss_dssp HHHHHHHHHHHHH-----SCCCHH---HHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 5566666666542 344432 3333444433 36777777766665553
No 139
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=52.66 E-value=97 Score=25.53 Aligned_cols=134 Identities=11% Similarity=0.045 Sum_probs=74.1
Q ss_pred HHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhc
Q psy5989 51 YEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLG 122 (220)
Q Consensus 51 yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLG 122 (220)
|.-.++.++|....++++.. .+..+..+ ..++ .+.|...|+++++ +.|.+|.
T Consensus 213 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~------------~~~A~~~~~~al~-----~~p~~~~--- 272 (388)
T 1w3b_A 213 LKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGL------------IDLAIDTYRRAIE-----LQPHFPD--- 272 (388)
T ss_dssp HHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHH-----TCSSCHH---
T ss_pred HHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCC------------HHHHHHHHHHHHh-----hCCCCHH---
Confidence 45567778888777766542 22223332 2222 2677888888775 4566653
Q ss_pred ccchhHHHHHHHhcChHHHHHHHHHHHHHHHHh------hhh------hhhhhhHHHHHhhccccc--chhHHHHHHHHH
Q psy5989 123 LALNFSVFYYEIINSPARACHLAKQVKYSCIGA------SRD------TKRSVCLLCEIFHTMSSS--GEKEELVQRAKL 188 (220)
Q Consensus 123 L~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~e------ld~------~~~d~~lilq~L~~~s~~--s~r~~~~~~akl 188 (220)
...|.+..+. -.++.++|+..-+++....-.. +-. -+.++. +.++....+ ..-+-...++.+
T Consensus 273 ~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~---~~~~~al~~~p~~~~~~~~l~~~ 348 (388)
T 1w3b_A 273 AYCNLANALK-EKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAV---RLYRKALEVFPEFAAAHSNLASV 348 (388)
T ss_dssp HHHHHHHHHH-HHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHH---HHHHHHTTSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHH-HcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHH---HHHHHHHhcCCCcHHHHHHHHHH
Confidence 2344444443 3688888888777775431111 101 122221 122222111 223456677788
Q ss_pred HHHHhhHHHHHHHHHHhHhc
Q psy5989 189 AEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 189 ~eq~ery~~m~~~~~~~~~~ 208 (220)
-.+..+|++-....+++++.
T Consensus 349 ~~~~g~~~~A~~~~~~a~~~ 368 (388)
T 1w3b_A 349 LQQQGKLQEALMHYKEAIRI 368 (388)
T ss_dssp HHTTTCCHHHHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHHHHhh
Confidence 78888899888888887764
No 140
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=52.25 E-value=65 Score=23.42 Aligned_cols=82 Identities=15% Similarity=0.169 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcCh--HHHHHHHHHHHH------HHHHHHHHh--cCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSP--DKACQLAKQVCA------HYFCFYFFL--MNDPE 83 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~--~~A~~lAk~A~~------d~~~~~~~~--~~~~e 83 (220)
.+.|...|++|+.+. |.+|. ...+.+..+|.-.++. ++|....++++. ..+..+..+ ..++.
T Consensus 60 ~~~A~~~~~~al~~~-----p~~~~---~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~ 131 (177)
T 2e2e_A 60 YSNSLLAYRQALQLR-----GENAE---LYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANY 131 (177)
T ss_dssp HHHHHHHHHHHHHHH-----CSCHH---HHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHcC-----CCCHH---HHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccH
Confidence 356777777777643 44432 2334444445556776 888887777754 233333333 22222
Q ss_pred CCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcch
Q psy5989 84 FSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIR 120 (220)
Q Consensus 84 ~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~Pir 120 (220)
+.|...|+++++ +.|.+|-+
T Consensus 132 ------------~~A~~~~~~al~-----~~p~~~~~ 151 (177)
T 2e2e_A 132 ------------AQAIELWQKVMD-----LNSPRINR 151 (177)
T ss_dssp ------------HHHHHHHHHHHH-----TCCTTSCH
T ss_pred ------------HHHHHHHHHHHh-----hCCCCccH
Confidence 677788887764 45766654
No 141
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=52.22 E-value=13 Score=31.73 Aligned_cols=13 Identities=15% Similarity=0.462 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHH
Q psy5989 15 DDSQKAYQQAFEI 27 (220)
Q Consensus 15 e~a~~aYq~A~ei 27 (220)
+.|...|++|+.+
T Consensus 196 ~~A~~~y~~Al~~ 208 (338)
T 2if4_A 196 EEAMQQYEMAIAY 208 (338)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4567778887764
No 142
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=51.75 E-value=55 Score=22.40 Aligned_cols=77 Identities=16% Similarity=0.229 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~ 85 (220)
.+.|...|+.|+.+ .|.+|. ...|.+. .|.-+++.++|....++++. ..+..+..+ ..++.
T Consensus 25 ~~~A~~~~~~al~~-----~~~~~~---~~~~l~~-~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~-- 93 (137)
T 3q49_B 25 YPEAAACYGRAITR-----NPLVAV---YYTNRAL-CYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESY-- 93 (137)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHHH-HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH--
T ss_pred HHHHHHHHHHHHhh-----CcCcHH---HHHHHHH-HHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhhH--
Confidence 35677788887764 344432 2233333 34468889999988888875 233334443 22232
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHh
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKS 111 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~ 111 (220)
+.|...|++++++...
T Consensus 94 ----------~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 94 ----------DEAIANLQRAYSLAKE 109 (137)
T ss_dssp ----------HHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHHChh
Confidence 7889999999987654
No 143
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.02 E-value=56 Score=22.34 Aligned_cols=80 Identities=6% Similarity=-0.169 Sum_probs=46.8
Q ss_pred HHHhhcChHHHHHHHHHHHH---------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCc
Q psy5989 50 YYEILNSPDKACQLAKQVCA---------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHP 118 (220)
Q Consensus 50 ~yEIl~~~~~A~~lAk~A~~---------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~P 118 (220)
.|--.++.++|...-++++. ..+..+..+ ..++. +.|...|++++.+ .|.+|
T Consensus 37 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~------------~~A~~~~~~~~~~-----~~~~~ 99 (148)
T 2dba_A 37 ELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDY------------DKAETEASKAIEK-----DGGDV 99 (148)
T ss_dssp HHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHHH-----TSCCH
T ss_pred HHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccH------------HHHHHHHHHHHhh-----CccCH
Confidence 33456777888877776652 333333333 22222 6778888888764 45554
Q ss_pred chhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 119 IRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 119 irLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
....+.+..++. +++.++|+..-++++.
T Consensus 100 ---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 100 ---KALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp ---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 233455555444 6888888777666553
No 144
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=50.68 E-value=57 Score=22.33 Aligned_cols=49 Identities=8% Similarity=-0.033 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|++|++ +.+.+|-......|.+..++. +++.++|+...++++.
T Consensus 7 ~~A~~~~~~al~-----~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 55 (117)
T 3k9i_A 7 AQAVPYYEKAIA-----SGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVK 55 (117)
T ss_dssp CCCHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 456788888874 334467666677777777766 6898888887777654
No 145
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=50.44 E-value=40 Score=21.25 Aligned_cols=46 Identities=17% Similarity=0.295 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|++|+++ .|.+|. ...|.+..++. .++.++|+...++++.
T Consensus 26 ~~A~~~~~~a~~~-----~~~~~~---~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 26 DEAIEYYQKALEL-----DPNNAE---AWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCHH---HHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 6788888888864 354542 33455555554 7888888877776654
No 146
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=50.17 E-value=51 Score=21.60 Aligned_cols=107 Identities=17% Similarity=0.176 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~ 85 (220)
.+.|...|+.+.+. .|.++.. ..+. ...|--.++.++|....++++.. .+..+..+ ..++
T Consensus 17 ~~~A~~~~~~~~~~-----~~~~~~~---~~~~-a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--- 84 (136)
T 2fo7_A 17 YDEAIEYYQKALEL-----DPRSAEA---WYNL-GNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGD--- 84 (136)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHHH---HHHH-HHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTC---
T ss_pred HHHHHHHHHHHHHc-----CCcchhH---HHHH-HHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcC---
Confidence 45677777777653 3444321 1122 23344567888998888777542 22233333 1112
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
.++|...|++++.. .|.+|. ...+.+..++. .++.++|....+++++
T Consensus 85 ---------~~~A~~~~~~~~~~-----~~~~~~---~~~~la~~~~~-~~~~~~A~~~~~~~~~ 131 (136)
T 2fo7_A 85 ---------YDEAIEYYQKALEL-----DPRSAE---AWYNLGNAYYK-QGDYDEAIEYYQKALE 131 (136)
T ss_dssp ---------HHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHT-TTCHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHHHHh-----CCCChH---HHHHHHHHHHH-HccHHHHHHHHHHHHc
Confidence 26677777777653 344432 22334444443 6888888777666553
No 147
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=49.84 E-value=59 Score=22.22 Aligned_cols=47 Identities=9% Similarity=0.051 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYS 151 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afde 151 (220)
+.|...|++|+++ .|.+|. ...+.+.-++. +++.++|+..-++++.-
T Consensus 55 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 101 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFVR---AYIRKATAQIA-VKEYASALETLDAARTK 101 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHHH-HhCHHHHHHHHHHHHHh
Confidence 6788888888764 455542 33445544444 68888887777766654
No 148
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=49.39 E-value=86 Score=28.12 Aligned_cols=47 Identities=21% Similarity=0.168 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 95 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 95 ~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
-++|...|++|+++ .|.+ .....|.+.-++. +++.++|+...++|+.
T Consensus 22 ~~~A~~~~~~Al~~-----~p~~---~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 68 (477)
T 1wao_1 22 YENAIKFYSQAIEL-----NPSN---AIYYGNRSLAYLR-TECYGYALGDATRAIE 68 (477)
T ss_dssp HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCcc---HHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 46777888888764 2333 3344455555554 6777887777766653
No 149
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=49.28 E-value=1.2e+02 Score=25.52 Aligned_cols=46 Identities=9% Similarity=-0.044 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|++|+++ .|.+|- ...|.+.-|+. +++.++|+..-++|+.
T Consensus 213 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~~-~g~~~~A~~~~~~al~ 258 (336)
T 1p5q_A 213 SAAIESCNKALEL-----DSNNEK---GLSRRGEAHLA-VNDFELARADFQKVLQ 258 (336)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 6788888888764 455543 33455555555 6888888776666553
No 150
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=49.26 E-value=46 Score=28.94 Aligned_cols=54 Identities=15% Similarity=0.154 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHhc--------CCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSK--------MQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~--------L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|++|+++.... ....+|....+.+|.+.-++. +++.++|+...++|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 78899999999865431 111566677778888877775 7899999888887764
No 151
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=49.22 E-value=37 Score=22.26 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVK 149 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Af 149 (220)
+.|...|++|+.+ .|.+|. ...|.+.-++. +++.++|+...++++
T Consensus 21 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNPV---GYSNKAMALIK-LGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCHH---HHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 7888999999864 466653 33566655555 688888877666654
No 152
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=48.63 E-value=55 Score=21.52 Aligned_cols=77 Identities=13% Similarity=0.081 Sum_probs=44.2
Q ss_pred hhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhccc
Q psy5989 53 ILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLA 124 (220)
Q Consensus 53 Il~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~ 124 (220)
..++.++|+...++++.. .+..+..+ ..++. +.|...|++++.+ .|.+|. ..
T Consensus 24 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~------------~~A~~~~~~~~~~-----~~~~~~---~~ 83 (131)
T 2vyi_A 24 KVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNY------------AGAVQDCERAICI-----DPAYSK---AY 83 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHHH-----CTTCHH---HH
T ss_pred HccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhch------------HHHHHHHHHHHhc-----CccCHH---HH
Confidence 466777777777766532 22233333 22222 6777888887753 355542 33
Q ss_pred chhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 125 LNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 125 LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
.+.+..++. .++.++|+...++++.
T Consensus 84 ~~~~~~~~~-~~~~~~A~~~~~~~~~ 108 (131)
T 2vyi_A 84 GRMGLALSS-LNKHVEAVAYYKKALE 108 (131)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hCCHHHHHHHHHHHHh
Confidence 444554444 6888888777666654
No 153
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=48.22 E-value=1.1e+02 Score=27.12 Aligned_cols=53 Identities=11% Similarity=0.157 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHhcCC--------CCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQ--------PTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~--------pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|++|+++.... + ..+|.+..+.+|.+.-|+. +++.++|+...++|+.
T Consensus 285 ~~A~~~y~~Al~~~p~~-~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEME-YGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTTC-CSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccc-ccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 78999999999764211 0 0134556777888877776 7999999988888765
No 154
>3msv_A Nuclear import adaptor, NRO1; helix repeats, heat repeats, protein binding; 2.18A {Schizosaccharomyces pombe}
Probab=48.11 E-value=60 Score=29.50 Aligned_cols=146 Identities=17% Similarity=0.151 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC--CCCCCCccc--cHHHHHHHHHH---------------HHHHHH-HHHhcCCCCCcc
Q psy5989 60 ACQLAKQVCAHYFCFYFFLMND--PEFSPLFPC--SLAVVEDSQKA---------------YQEAFD-IAKSKMQPTHPI 119 (220)
Q Consensus 60 A~~lAk~A~~d~~~~~~~~~~~--~e~~~~~~~--k~~~~e~a~~a---------------Yq~A~e-iA~~~L~pt~Pi 119 (220)
+-+.|++-+..++.++..+... +.|-+.+++ |. ++..+--+ |..-.. +-+..-.|.-|-
T Consensus 198 ~~~ta~kmi~qa~~~l~~Laqk~~e~~t~~tld~~rp-l~~lS~yl~~~~~~~SE~flldvc~~~t~l~lks~~d~nTpa 276 (393)
T 3msv_A 198 VTQLVNPYIEKAIQYLRPLAQDSTEYFDALTPDSLRP-LYILSSYLFQFGDQFSEAFLLDVCSIITALWLKSVVDPNTPA 276 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTSCCCTTCCTGGGTT-HHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHTTCSTTSCH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhChhhccccccchhhH-HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhccCChh
Confidence 4677888888888888888433 444455544 21 22111111 221111 123334455554
Q ss_pred hh------cc---cchhHHHHHHHhcC----hHHHHHHHHHHHHHHHHhhhhhh---hhhhHHHHHhhcccccchhHHHH
Q psy5989 120 RL------GL---ALNFSVFYYEIINS----PARACHLAKQVKYSCIGASRDTK---RSVCLLCEIFHTMSSSGEKEELV 183 (220)
Q Consensus 120 rL------GL---~LN~SVF~yEIl~~----~~~A~~iAk~AfdeAi~eld~~~---~d~~lilq~L~~~s~~s~r~~~~ 183 (220)
+- |+ .-|++=+|-+.+.| .+.+++.|++-+..||...+-+| ++.-+++.+-..|+
T Consensus 277 ~~kl~Aq~av~t~~t~vAeyy~DLlDd~es~vdd~~~kA~~~L~~aid~~~~~y~ldk~~e~l~~lAd~km--------- 347 (393)
T 3msv_A 277 YYKLIAQEAVLNNYTTFAEYYMDLLDNSESNVDDLINKASSWLNNSVDTWNVIYTLDKSPERLLKLADIKM--------- 347 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHSCCTTHHHHHHHHHH---------
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHH---------
Confidence 31 22 24567778888764 45789999999999999888666 33334444443343
Q ss_pred HHHHH----HHHHhhHHHHHHHHHHhHhcCceecee
Q psy5989 184 QRAKL----AEQAERYDDMAAAMKAVTETGVEYGIY 215 (220)
Q Consensus 184 ~~akl----~eq~ery~~m~~~~~~~~~~~~el~~~ 215 (220)
++|.| ..|-..|-|-++++++.-.+|++|+-+
T Consensus 348 dlan~~~~Ed~Qdk~l~EA~~~ireAq~~Gv~l~~d 383 (393)
T 3msv_A 348 DLAQIVQDEASQDNYLKEACNAIKEAQGSGVELSPD 383 (393)
T ss_dssp HHHHHCSCHHHHHHHHHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHccChhHHHHHHHHHHHHHHHHHhcCCCCChH
Confidence 44555 567889999999999999999999754
No 155
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=47.98 E-value=90 Score=24.71 Aligned_cols=29 Identities=7% Similarity=0.119 Sum_probs=21.3
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q psy5989 5 GDEPQEGAVVDDSQKAYQQAFEISKSKMQPTHPI 38 (220)
Q Consensus 5 ~~~~~r~~~~e~a~~aYq~A~eiA~~~L~pt~Pi 38 (220)
..+.+|...-+.|.+.|+.|+++ .|.+|-
T Consensus 9 ~~~~~r~~~feeA~~~~~~Ai~l-----~P~~ae 37 (158)
T 1zu2_A 9 ETEFDRILLFEQIRQDAENTYKS-----NPLDAD 37 (158)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH-----CTTCHH
T ss_pred ccHHHHHhHHHHHHHHHHHHHHH-----CCCCHH
Confidence 35778888888999999988763 455553
No 156
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=47.70 E-value=70 Score=22.48 Aligned_cols=76 Identities=13% Similarity=0.034 Sum_probs=48.1
Q ss_pred hhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhccc
Q psy5989 53 ILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLA 124 (220)
Q Consensus 53 Il~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~ 124 (220)
-.++.++|....++|+. ..+..+..+ ..++. +.|..+|++|+++ .|.+|- ..
T Consensus 29 ~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~------------~~A~~~~~~al~l-----~P~~~~---~~ 88 (121)
T 1hxi_A 29 KLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKD------------GLAIIALNHARML-----DPKDIA---VH 88 (121)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHHH-----CTTCHH---HH
T ss_pred HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCH------------HHHHHHHHHHHHh-----CCCCHH---HH
Confidence 46888999988888764 233444444 22333 7888999998864 566664 33
Q ss_pred chhHHHHHHHhcChHHHHHHHHHHH
Q psy5989 125 LNFSVFYYEIINSPARACHLAKQVK 149 (220)
Q Consensus 125 LN~SVF~yEIl~~~~~A~~iAk~Af 149 (220)
.|.++.+.. .++.++|+..-++++
T Consensus 89 ~~la~~~~~-~g~~~~A~~~~~~al 112 (121)
T 1hxi_A 89 AALAVSHTN-EHNANAALASLRAWL 112 (121)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCHHHHHHHHHHHH
Confidence 455555544 577777776665554
No 157
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=47.28 E-value=65 Score=21.98 Aligned_cols=80 Identities=9% Similarity=-0.010 Sum_probs=50.3
Q ss_pred HhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcc
Q psy5989 52 EILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGL 123 (220)
Q Consensus 52 EIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL 123 (220)
--.++.++|....++++. .++..+..+ ..++. +.|...|++++.+ .|.+|. .
T Consensus 20 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~------------~~A~~~~~~al~~-----~p~~~~---~ 79 (137)
T 3q49_B 20 FVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQP------------EQALADCRRALEL-----DGQSVK---A 79 (137)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH------------HHHHHHHHHHHHH-----CTTCHH---H
T ss_pred HHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCH------------HHHHHHHHHHHHh-----CchhHH---H
Confidence 356778888888777765 334444444 22222 6788888888764 355443 3
Q ss_pred cchhHHHHHHHhcChHHHHHHHHHHHHHH
Q psy5989 124 ALNFSVFYYEIINSPARACHLAKQVKYSC 152 (220)
Q Consensus 124 ~LN~SVF~yEIl~~~~~A~~iAk~AfdeA 152 (220)
..+.+..++. +++.++|+..-++++.-.
T Consensus 80 ~~~l~~~~~~-~~~~~~A~~~~~~a~~~~ 107 (137)
T 3q49_B 80 HFFLGQCQLE-MESYDEAIANLQRAYSLA 107 (137)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HhhHHHHHHHHHHHHHHC
Confidence 4455555555 688888888877777654
No 158
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=45.48 E-value=35 Score=23.17 Aligned_cols=49 Identities=10% Similarity=0.114 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|+.++. ..|.+|..-...++.+..++. .++.++|+...++++.
T Consensus 19 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~ 67 (129)
T 2xev_A 19 DDASQLFLSFLE-----LYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVS 67 (129)
T ss_dssp HHHHHHHHHHHH-----HCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 677788887764 357888655555566665555 6888888777666554
No 159
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=44.73 E-value=69 Score=21.54 Aligned_cols=49 Identities=10% Similarity=0.044 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCI 153 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi 153 (220)
+.|...|++|+++ .|.+|. ...+.+.-|+ -+++.++|+..-++++.-+-
T Consensus 24 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 24 SRALALFEELVET-----DPDYVG---TYYHLGKLYE-RLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhhhh
Confidence 7788888888864 455554 3445555444 47999999888888776543
No 160
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=44.52 E-value=1.4e+02 Score=28.02 Aligned_cols=102 Identities=11% Similarity=-0.010 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh-------------hhhhh
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASR-------------DTKRS 162 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld-------------~~~~d 162 (220)
+.|...|++|+++ .|.++. ...|.+.-++. .++.++|+..-++|+...=...+ +..+
T Consensus 450 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~~-~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~- 519 (681)
T 2pzi_A 450 AKATRKLDDLAER-----VGWRWR---LVWYRAVAELL-TGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE- 519 (681)
T ss_dssp HHHHHHHHHHHHH-----HCCCHH---HHHHHHHHHHH-HTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-
T ss_pred HHHHHHHHHHhcc-----CcchHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-
Confidence 6777777777754 355543 33444554444 68888887766666542211111 1111
Q ss_pred hhHHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhcC
Q psy5989 163 VCLLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTETG 209 (220)
Q Consensus 163 ~~lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~~ 209 (220)
...+-+.|.-.- ..-+-+..++.+-.+..+|++-+...+++++.+
T Consensus 520 ~~~~~~al~~~P--~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 564 (681)
T 2pzi_A 520 HKFYQTVWSTND--GVISAAFGLARARSAEGDRVGAVRTLDEVPPTS 564 (681)
T ss_dssp TCHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTS
T ss_pred HHHHHHHHHhCC--chHHHHHHHHHHHHHcCCHHHHHHHHHhhcccC
Confidence 112222222111 222345677888888889998888887776543
No 161
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=40.91 E-value=68 Score=20.81 Aligned_cols=47 Identities=13% Similarity=0.086 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|+++++. .|.+|.. ...|.+..++. +++.++|+..-++++.
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 6778888888753 4666531 34555665555 6888888777666653
No 162
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=40.89 E-value=71 Score=30.03 Aligned_cols=108 Identities=11% Similarity=0.023 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHh---hcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCC
Q psy5989 15 DDSQKAYQQAFEISK---SKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPE 83 (220)
Q Consensus 15 e~a~~aYq~A~eiA~---~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e 83 (220)
+.|...|++|++.+. ..+.|.++- ..++.+. .|--+++.++|....++|+.. .+.++..+ ..++.
T Consensus 408 ~~A~~~~~~al~~~~~~~~~~~p~~~~---~~~~~a~-~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~ 483 (681)
T 2pzi_A 408 VQTLDSLRAARHGALDADGVDFSESVE---LPLMEVR-ALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDY 483 (681)
T ss_dssp HHHHHHHHHHHTC-------CCTTCSH---HHHHHHH-HHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHhhhhcccccccccccchh---HHHHHHH-HHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCH
Confidence 466777777662111 123344332 2222222 334568899999988888753 33333333 22333
Q ss_pred CCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHH
Q psy5989 84 FSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQV 148 (220)
Q Consensus 84 ~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~A 148 (220)
+.|..+|++|+++ .|.+|.- .+|.+..+.. +++.++ +..-++|
T Consensus 484 ------------~~A~~~~~~al~l-----~P~~~~~---~~~lg~~~~~-~g~~~~-~~~~~~a 526 (681)
T 2pzi_A 484 ------------DSATKHFTEVLDT-----FPGELAP---KLALAATAEL-AGNTDE-HKFYQTV 526 (681)
T ss_dssp ------------HHHHHHHHHHHHH-----STTCSHH---HHHHHHHHHH-HTCCCT-TCHHHHH
T ss_pred ------------HHHHHHHHHHHHh-----CCCChHH---HHHHHHHHHH-cCChHH-HHHHHHH
Confidence 7888899988864 4555432 2344444443 455444 4433333
No 163
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=39.53 E-value=1.1e+02 Score=27.36 Aligned_cols=18 Identities=11% Similarity=-0.213 Sum_probs=10.5
Q ss_pred HhhcChHHHHHHHHHHHH
Q psy5989 52 EILNSPDKACQLAKQVCA 69 (220)
Q Consensus 52 EIl~~~~~A~~lAk~A~~ 69 (220)
--+++.++|....++|+.
T Consensus 51 ~~~g~~~~A~~~~~~al~ 68 (477)
T 1wao_1 51 LRTECYGYALGDATRAIE 68 (477)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHH
Confidence 345666666666666553
No 164
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=39.52 E-value=1e+02 Score=22.13 Aligned_cols=46 Identities=20% Similarity=0.239 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|++|+++ .|.+| .+..|.+..|+. +++.++|+...++++.
T Consensus 28 ~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~al~ 73 (164)
T 3sz7_A 28 SKAIDLYTQALSI-----APANP---IYLSNRAAAYSA-SGQHEKAAEDAELATV 73 (164)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCcCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 7889999999864 35554 344556665555 6898888887777654
No 165
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=38.34 E-value=1.3e+02 Score=23.03 Aligned_cols=29 Identities=10% Similarity=0.066 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 180 EELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 180 ~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
+-+..++.+-.+..++++-...++.+...
T Consensus 185 ~a~~~l~~~~~~~g~~~~A~~~~~~l~~~ 213 (225)
T 2yhc_A 185 DALPLMENAYRQMQMNAQAEKVAKIIAAN 213 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHhh
Confidence 44556666666677777777766655543
No 166
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=37.79 E-value=1.4e+02 Score=24.23 Aligned_cols=75 Identities=15% Similarity=0.190 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCC
Q psy5989 14 VDDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFS 85 (220)
Q Consensus 14 ~e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~ 85 (220)
-+.|...|++|+.. .|.+| .+..|.+.- |.-+++.++|....++|+. ..+..+..+ ..++.
T Consensus 20 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~-~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~-- 88 (281)
T 2c2l_A 20 YPEAAACYGRAITR-----NPLVA---VYYTNRALC-YLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESY-- 88 (281)
T ss_dssp HHHHHHHHHHHHHH-----CSCCH---HHHHHHHHH-HHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCH--
T ss_pred HHHHHHHHHHHHHh-----CCccH---HHHHHHHHH-HHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH--
Confidence 45677888888764 44444 333445443 4467899999999888764 333444443 22333
Q ss_pred CCccccHHHHHHHHHHHHHHHHHH
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIA 109 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA 109 (220)
+.|...|++|+++.
T Consensus 89 ----------~~A~~~~~~al~l~ 102 (281)
T 2c2l_A 89 ----------DEAIANLQRAYSLA 102 (281)
T ss_dssp ----------HHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHhC
Confidence 78888999998765
No 167
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=37.73 E-value=62 Score=27.15 Aligned_cols=49 Identities=16% Similarity=0.207 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHh---hh--------hhhhhh
Q psy5989 95 VEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGA---SR--------DTKRSV 163 (220)
Q Consensus 95 ~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~e---ld--------~~~~d~ 163 (220)
-|.|.++|++|..- ...|- +++...+||.|||..||.=.+- || .||+++
T Consensus 19 YE~A~~~Ye~a~~n------g~~pQ--------------~~Kql~KA~NIAKse~drd~avqrKLerMAe~Amt~MYKeA 78 (199)
T 3ub0_A 19 YEKARADLEEAKKN------DVSPQ--------------LLKQLTKACNIAKSEFEREASVQKKLDKMAEQAAASMYKEA 78 (199)
T ss_dssp HHHHHHHHHHHHHT------TCCHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHhc------CCCHH--------------HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36788888888531 23332 3678889999999999864432 33 678874
No 168
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=36.99 E-value=81 Score=20.11 Aligned_cols=78 Identities=9% Similarity=-0.021 Sum_probs=45.3
Q ss_pred HHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCC--Ccch
Q psy5989 51 YEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPT--HPIR 120 (220)
Q Consensus 51 yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt--~Pir 120 (220)
|--.++.++|+...++++.. .+..+..+ ..++ .+.|...|++++++ .|. ++
T Consensus 16 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~------------~~~A~~~~~~a~~~-----~~~~~~~-- 76 (112)
T 2kck_A 16 QYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLER------------YEEAVDCYNYVINV-----IEDEYNK-- 76 (112)
T ss_dssp HHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC------------HHHHHHHHHHHHHT-----SCCTTCH--
T ss_pred HHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccC------------HHHHHHHHHHHHHh-----CcccchH--
Confidence 34578888888888777642 23333333 1222 26778888887753 344 33
Q ss_pred hcccchhHHHHHHHh-cChHHHHHHHHHHH
Q psy5989 121 LGLALNFSVFYYEII-NSPARACHLAKQVK 149 (220)
Q Consensus 121 LGL~LN~SVF~yEIl-~~~~~A~~iAk~Af 149 (220)
....+.+..+.. + ++.++|+..-+++.
T Consensus 77 -~~~~~l~~~~~~-~~~~~~~A~~~~~~~~ 104 (112)
T 2kck_A 77 -DVWAAKADALRY-IEGKEVEAEIAEARAK 104 (112)
T ss_dssp -HHHHHHHHHHTT-CSSCSHHHHHHHHHHG
T ss_pred -HHHHHHHHHHHH-HhCCHHHHHHHHHHHh
Confidence 334455554443 6 78888777665543
No 169
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=36.79 E-value=1.6e+02 Score=25.44 Aligned_cols=46 Identities=11% Similarity=0.106 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|++|++ +.|.++- ...+.+.-|+. +++.++|+..-++|+.
T Consensus 290 ~~A~~~~~~al~-----~~p~~~~---a~~~lg~~~~~-~g~~~eA~~~l~~Al~ 335 (370)
T 1ihg_A 290 QGAVDSCLEALE-----IDPSNTK---ALYRRAQGWQG-LKEYDQALADLKKAQE 335 (370)
T ss_dssp HHHHHHHHHHHT-----TCTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCchhHH---HHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 667777777774 4565542 23444444444 6888888766665543
No 170
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=36.73 E-value=2.1e+02 Score=24.83 Aligned_cols=16 Identities=13% Similarity=0.059 Sum_probs=9.0
Q ss_pred HhcChHHHHHHHHHHH
Q psy5989 134 IINSPARACHLAKQVK 149 (220)
Q Consensus 134 Il~~~~~A~~iAk~Af 149 (220)
+.++.++|+..-+++.
T Consensus 235 ~~~~~~~A~~~~~~a~ 250 (490)
T 2xm6_A 235 VTQDYTQSRVLFSQSA 250 (490)
T ss_dssp SCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 3556666666555543
No 171
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=36.62 E-value=92 Score=20.65 Aligned_cols=81 Identities=15% Similarity=0.119 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccc
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSS 175 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~ 175 (220)
+.|...|++++. +.|.++ ....+.+..++. .++.++|+...++++... .+
T Consensus 33 ~~A~~~~~~al~-----~~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~a~~~~--------~~------------- 82 (133)
T 2lni_A 33 PQAMKHYTEAIK-----RNPKDA---KLYSNRAACYTK-LLEFQLALKDCEECIQLE--------PT------------- 82 (133)
T ss_dssp HHHHHHHHHHHT-----TCTTCH---HHHHHHHHHHTT-TTCHHHHHHHHHHHHHHC--------TT-------------
T ss_pred HHHHHHHHHHHH-----cCCCcH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHhC--------CC-------------
Confidence 678888888874 345443 334455554444 688888887777665421 00
Q ss_pred cchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 176 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 176 ~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
.-.-+..++.+..+..+|++-....+++++.
T Consensus 83 --~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 83 --FIKGYTRKAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --chHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 1122344555555666777776666666553
No 172
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=34.73 E-value=95 Score=20.26 Aligned_cols=81 Identities=14% Similarity=0.103 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccc
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSS 175 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~ 175 (220)
+.|...|++++.+ .|.+|. ...+.+..++. .++.++|+...++++...- .+
T Consensus 29 ~~A~~~~~~~~~~-----~~~~~~---~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~-------~~------------- 79 (131)
T 2vyi_A 29 EAAVHFYGKAIEL-----NPANAV---YFCNRAAAYSK-LGNYAGAVQDCERAICIDP-------AY------------- 79 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHCT-------TC-------------
T ss_pred HHHHHHHHHHHHc-----CCCCHH---HHHHHHHHHHH-hhchHHHHHHHHHHHhcCc-------cC-------------
Confidence 6788888888764 344432 33445555544 7888888888777765310 00
Q ss_pred cchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 176 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 176 ~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
-.-+..++.+..+..+|++-....+++++.
T Consensus 80 ---~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 80 ---SKAYGRMGLALSSLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 122345555556666777777776666554
No 173
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=34.45 E-value=1.1e+02 Score=20.80 Aligned_cols=46 Identities=17% Similarity=0.059 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|++|+++ .|.+| .+..|.+.-++. +++.++|+...++++.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 21 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 7888999998864 45555 344555555555 6888888877776654
No 174
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=34.32 E-value=13 Score=32.95 Aligned_cols=42 Identities=26% Similarity=0.426 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcchhcc-cchhHHHHHHHhc
Q psy5989 95 VEDSQKAYQEAFDIAKSKMQPTHPIRLGL-ALNFSVFYYEIIN 136 (220)
Q Consensus 95 ~e~a~~aYq~A~eiA~~~L~pt~PirLGL-~LN~SVF~yEIl~ 136 (220)
-++.++|-|+|+.+|...+.|.-++.|=+ +||..+||||--+
T Consensus 211 ~krVleCLqkaLkiA~~~~d~~~~v~LfveILn~ylyff~~g~ 253 (298)
T 2r17_C 211 GKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEKEN 253 (298)
T ss_dssp HHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHhhhhCCC
Confidence 35778999999999999888665555544 7999999999644
No 175
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=34.12 E-value=99 Score=20.26 Aligned_cols=88 Identities=15% Similarity=0.178 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccc
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSS 175 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~ 175 (220)
+.|...|++++.. .|.+| ....|.+..++. .++.++|+...++++...-..-.+. ...
T Consensus 21 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~----~~~--------- 78 (131)
T 1elr_A 21 DTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGRENREDY----RQI--------- 78 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHSTTCH----HHH---------
T ss_pred HHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhccccchhH----HHH---------
Confidence 7788888888764 34444 334555655555 6899999888877766443221100 000
Q ss_pred cchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 176 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 176 ~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
-.-+..++.+..+..+|++-...++++++.
T Consensus 79 ---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 79 ---AKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 112334555555666677766666666554
No 176
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=34.02 E-value=1.3e+02 Score=21.67 Aligned_cols=13 Identities=31% Similarity=0.575 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDI 108 (220)
Q Consensus 96 e~a~~aYq~A~ei 108 (220)
+.|..+|++|+.+
T Consensus 61 ~~A~~~~~~al~~ 73 (177)
T 2e2e_A 61 SNSLLAYRQALQL 73 (177)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 4555666665543
No 177
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=32.62 E-value=1.2e+02 Score=20.96 Aligned_cols=103 Identities=15% Similarity=0.081 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh------------hhhhhh
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASR------------DTKRSV 163 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld------------~~~~d~ 163 (220)
+.|...|++++.+ .|.++ .+..|.+..++. .++.++|+...++++...-...+ .-+.++
T Consensus 30 ~~A~~~~~~al~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A 100 (166)
T 1a17_A 30 ENAIKFYSQAIEL-----NPSNA---IYYGNRSLAYLR-TECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAA 100 (166)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHH
Confidence 7888899988864 34443 344455555544 78999999888887654211111 112223
Q ss_pred hHHHHHhhcccccchhHHH--HHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 164 CLLCEIFHTMSSSGEKEEL--VQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 164 ~lilq~L~~~s~~s~r~~~--~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
.-.++....... ....-. ..++.......+|++-....+++...
T Consensus 101 ~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 101 LRDYETVVKVKP-HDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHST-TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 222222111110 112222 33343355578888888887776554
No 178
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=32.28 E-value=1.7e+02 Score=22.29 Aligned_cols=63 Identities=16% Similarity=0.266 Sum_probs=40.2
Q ss_pred HHhhcChHHHHHHHHHHHH------HHHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhc
Q psy5989 51 YEILNSPDKACQLAKQVCA------HYFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLG 122 (220)
Q Consensus 51 yEIl~~~~~A~~lAk~A~~------d~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLG 122 (220)
|.-+++.++|+..-++++. +.+..+..+ ..++. +.|...|++++++ .|.||.
T Consensus 64 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~------------~~A~~~~~~al~~-----~P~~~~--- 123 (208)
T 3urz_A 64 YKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQE------------KDALRMYEKILQL-----EADNLA--- 123 (208)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH------------HHHHHHHHHHHHH-----CTTCHH---
T ss_pred HHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCH------------HHHHHHHHHHHHc-----CCCCHH---
Confidence 4567899999998888764 334444444 22333 7889999999863 577764
Q ss_pred ccchhHHHHHH
Q psy5989 123 LALNFSVFYYE 133 (220)
Q Consensus 123 L~LN~SVF~yE 133 (220)
...|.+..||.
T Consensus 124 a~~~lg~~~~~ 134 (208)
T 3urz_A 124 ANIFLGNYYYL 134 (208)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33455555554
No 179
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=32.05 E-value=1.6e+02 Score=23.84 Aligned_cols=45 Identities=16% Similarity=0.245 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVK 149 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Af 149 (220)
+.|...|++|+.+ .|.+| .+..|.+.-++. +++.++|+...++|+
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~A~~~~~~al 65 (281)
T 2c2l_A 21 PEAAACYGRAITR-----NPLVA---VYYTNRALCYLK-MQQPEQALADCRRAL 65 (281)
T ss_dssp HHHHHHHHHHHHH-----CSCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 6777888888753 34444 344566655554 678777777666654
No 180
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=31.49 E-value=1.8e+02 Score=22.33 Aligned_cols=49 Identities=10% Similarity=0.038 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCccccccccchhHHHHHhhcChHHHHHHHHHHHH
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQVCA 69 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~ 69 (220)
+.|...|+++++ ..|.+|..-...++.. ..|.-.++.++|+..-++++.
T Consensus 21 ~~A~~~~~~~~~-----~~p~~~~~~~a~~~lg-~~~~~~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 21 RQAITQLEALDN-----RYPFGPYSQQVQLDLI-YAYYKNADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHH-HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCCCChHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHH
Confidence 456666666654 3566664333333333 345568899999888777654
No 181
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=28.11 E-value=1.6e+02 Score=20.85 Aligned_cols=64 Identities=16% Similarity=0.132 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHH-HHhhh---hhhhhhh-HHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 139 ARACHLAKQVKYSC-IGASR---DTKRSVC-LLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 139 ~~A~~iAk~AfdeA-i~eld---~~~~d~~-lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
.+|+.++++|++.= ....+ ..|.++. ++++.++.-.....|+. |-..+..|=+.++.+|..+..
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~------lr~K~~eYl~RAE~LK~~l~~ 82 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCN------LREKISKYMDRAENIKKYLDQ 82 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHH------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHH------HHHHHHHHHHHHHHHHHHHHh
Confidence 47888998886641 11222 5677775 66667765543333332 334456677777777776543
No 182
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=27.94 E-value=1.2e+02 Score=19.35 Aligned_cols=82 Identities=16% Similarity=0.166 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccc
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSS 175 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~ 175 (220)
+.|...|++++.. .|.+|. ...+.+..++. .++.++|+...++++... .
T Consensus 21 ~~A~~~~~~~~~~-----~~~~~~---~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~--------~-------------- 69 (118)
T 1elw_A 21 DDALQCYSEAIKL-----DPHNHV---LYSNRSAAYAK-KGDYQKAYEDGCKTVDLK--------P-------------- 69 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-HTCHHHHHHHHHHHHHHC--------T--------------
T ss_pred HHHHHHHHHHHHH-----CCCcHH---HHHHHHHHHHh-hccHHHHHHHHHHHHHhC--------c--------------
Confidence 6788888888753 455543 33445555444 688888887777665421 0
Q ss_pred cchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhcC
Q psy5989 176 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTETG 209 (220)
Q Consensus 176 ~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~~ 209 (220)
..-.-+..++.+..+..+|++-....+++++.+
T Consensus 70 -~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 102 (118)
T 1elw_A 70 -DWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 102 (118)
T ss_dssp -TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred -ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC
Confidence 011234556667777778888888877776643
No 183
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=27.73 E-value=1.7e+02 Score=21.06 Aligned_cols=106 Identities=14% Similarity=0.045 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhh------hh------
Q psy5989 92 LAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASR------DT------ 159 (220)
Q Consensus 92 ~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld------~~------ 159 (220)
+.-+++|...|+.|. +.+|-+-...++.+..|++ .++.++|+..-++++.--=...+ ..
T Consensus 10 ~~~~e~ai~~~~~a~--------~~~p~~~~~~~~la~~y~~-~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~ 80 (150)
T 4ga2_A 10 KADVERYIASVQGST--------PSPRQKSIKGFYFAKLYYE-AKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEEN 80 (150)
T ss_dssp HHHHHHHHHHHHHHS--------CSHHHHHTTHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred cChHHHHHHHHHHhc--------ccCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCc
Confidence 334567777777664 2333333344566777776 58888888777776542111111 11
Q ss_pred hhhhh-HHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHH-HHHhHhc
Q psy5989 160 KRSVC-LLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAA-MKAVTET 208 (220)
Q Consensus 160 ~~d~~-lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~-~~~~~~~ 208 (220)
+.++. ..-+.+.-.. ..-+-+..++.+-.+..+|++-+.. .+++++.
T Consensus 81 ~~~A~~~~~~al~~~p--~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l 129 (150)
T 4ga2_A 81 TDKAVECYRRSVELNP--TQKDLVLKIAELLCKNDVTDGRAKYWVERAAKL 129 (150)
T ss_dssp HHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh
Confidence 11221 1111111111 3345677788887888888876654 6776664
No 184
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=26.42 E-value=2e+02 Score=23.24 Aligned_cols=105 Identities=16% Similarity=0.138 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc-cccccccchhHHHHHhhcChHHHHHHHHHHHHH-----HHHHHHH--h-cCCCCCC
Q psy5989 15 DDSQKAYQQAFEISKSKMQPTHP-IRLGLALNFSVFYYEILNSPDKACQLAKQVCAH-----YFCFYFF--L-MNDPEFS 85 (220)
Q Consensus 15 e~a~~aYq~A~eiA~~~L~pt~P-irLGLaLN~SVF~yEIl~~~~~A~~lAk~A~~d-----~~~~~~~--~-~~~~e~~ 85 (220)
+.|...|++|+. +.|.|| .+++|+ . .|--.+++++|....+++... ....... + ..+..
T Consensus 134 ~~A~~~~~~al~-----~~P~~~~a~~~la----~-~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~-- 201 (287)
T 3qou_A 134 TDALPLLXDAWQ-----LSNQNGEIGLLLA----E-TLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAAD-- 201 (287)
T ss_dssp HHHHHHHHHHHH-----HTTSCHHHHHHHH----H-HHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTS--
T ss_pred HHHHHHHHHHHH-----hCCcchhHHHHHH----H-HHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhccc--
Confidence 456677777765 345554 333333 2 334678899998887766431 0000000 1 11111
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 86 PLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 86 ~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.+...|++++.. .|.+| ...+|.+..+.. .++.++|+..-.+++.
T Consensus 202 ----------~~a~~~l~~al~~-----~P~~~---~~~~~la~~l~~-~g~~~~A~~~l~~~l~ 247 (287)
T 3qou_A 202 ----------TPEIQQLQQQVAE-----NPEDA---ALATQLALQLHQ-VGRNEEALELLFGHLR 247 (287)
T ss_dssp ----------CHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred ----------CccHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 2356777777642 35544 344566665555 6888887766655544
No 185
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=25.65 E-value=2.5e+02 Score=23.55 Aligned_cols=45 Identities=7% Similarity=0.007 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVK 149 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Af 149 (220)
+.|...|++|+++ .|.|+- ...|.+.-|+. +++.++|+..-++++
T Consensus 247 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~a~~~-~g~~~~A~~~l~~al 291 (338)
T 2if4_A 247 DEAIGHCNIVLTE-----EEKNPK---ALFRRGKAKAE-LGQMDSARDDFRKAQ 291 (338)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHT-TTCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-cCCHHHHHHHHHHHH
Confidence 6788888888864 455542 23444444444 688777776655553
No 186
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=24.77 E-value=2.5e+02 Score=22.63 Aligned_cols=102 Identities=11% Similarity=0.036 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHH-----------HHhhh-hhhhhh
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSC-----------IGASR-DTKRSV 163 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeA-----------i~eld-~~~~d~ 163 (220)
+.|...|++++. +.|.|| ...++.+.-+.. .+++++|....+++.... +.-.. .-..++
T Consensus 134 ~~A~~~~~~al~-----~~P~~~---~a~~~la~~~~~-~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a 204 (287)
T 3qou_A 134 TDALPLLXDAWQ-----LSNQNG---EIGLLLAETLIA-LNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPE 204 (287)
T ss_dssp HHHHHHHHHHHH-----HTTSCH---HHHHHHHHHHHH-TTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHHHH-----hCCcch---hHHHHHHHHHHH-CCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCcc
Confidence 678888888875 346665 233444444444 588888877766552210 00000 001111
Q ss_pred -hHHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 164 -CLLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 164 -~lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
..+-+.+...- .+-+-...++.+-.+..||++-.....++++.
T Consensus 205 ~~~l~~al~~~P--~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~ 248 (287)
T 3qou_A 205 IQQLQQQVAENP--EDAALATQLALQLHQVGRNEEALELLFGHLRX 248 (287)
T ss_dssp HHHHHHHHHHCT--TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC--ccHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 12222222222 33345666777777888888888887777764
No 187
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=23.72 E-value=1.5e+02 Score=19.09 Aligned_cols=114 Identities=14% Similarity=0.102 Sum_probs=61.6
Q ss_pred HHhhcChHHHHHHHHHHHHH------HHHHHHHh--cCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhcCCCCCcchhc
Q psy5989 51 YEILNSPDKACQLAKQVCAH------YFCFYFFL--MNDPEFSPLFPCSLAVVEDSQKAYQEAFDIAKSKMQPTHPIRLG 122 (220)
Q Consensus 51 yEIl~~~~~A~~lAk~A~~d------~~~~~~~~--~~~~e~~~~~~~k~~~~e~a~~aYq~A~eiA~~~L~pt~PirLG 122 (220)
|-..++.++|..+.++++.. .+..+..+ ..++ .+.|...|++++.. .|.+|.
T Consensus 11 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~------------~~~A~~~~~~~~~~-----~~~~~~--- 70 (136)
T 2fo7_A 11 YYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGD------------YDEAIEYYQKALEL-----DPRSAE--- 70 (136)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC------------HHHHHHHHHHHHHH-----CTTCHH---
T ss_pred HHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcC------------HHHHHHHHHHHHHH-----CCCchH---
Confidence 34467888888877776542 12222222 1111 25677777777653 344432
Q ss_pred ccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccccchhHHHHHHHHHHHHHhhHHHHHHHH
Q psy5989 123 LALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSSSGEKEELVQRAKLAEQAERYDDMAAAM 202 (220)
Q Consensus 123 L~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~~s~r~~~~~~akl~eq~ery~~m~~~~ 202 (220)
...+.+..++ -.++.++|....+++.... . . ...-...++.+..+..+|++-....
T Consensus 71 ~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~----~---~----------------~~~~~~~la~~~~~~~~~~~A~~~~ 126 (136)
T 2fo7_A 71 AWYNLGNAYY-KQGDYDEAIEYYQKALELD----P---R----------------SAEAWYNLGNAYYKQGDYDEAIEYY 126 (136)
T ss_dssp HHHHHHHHHH-TTTCHHHHHHHHHHHHHHC----T---T----------------CHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHH-HhcCHHHHHHHHHHHHHhC----C---C----------------ChHHHHHHHHHHHHHccHHHHHHHH
Confidence 2234444443 3678888777666654321 0 0 1122345566666677788877777
Q ss_pred HHhHhc
Q psy5989 203 KAVTET 208 (220)
Q Consensus 203 ~~~~~~ 208 (220)
++++..
T Consensus 127 ~~~~~~ 132 (136)
T 2fo7_A 127 QKALEL 132 (136)
T ss_dssp HHHHHH
T ss_pred HHHHcc
Confidence 776553
No 188
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=22.36 E-value=2.6e+02 Score=21.17 Aligned_cols=46 Identities=9% Similarity=0.057 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKY 150 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afd 150 (220)
+.|...|++|+++ .|.+| ...+|.+..++. .++.++|+..-++++.
T Consensus 71 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 116 (208)
T 3urz_A 71 DKAYLFYKELLQK-----APNNV---DCLEACAEMQVC-RGQEKDALRMYEKILQ 116 (208)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 7889999999864 45554 445566666665 6899998887777654
No 189
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=21.38 E-value=59 Score=27.26 Aligned_cols=20 Identities=30% Similarity=0.481 Sum_probs=15.0
Q ss_pred HhhcChHHHHHHHHHHHHHH
Q psy5989 52 EILNSPDKACQLAKQVCAHY 71 (220)
Q Consensus 52 EIl~~~~~A~~lAk~A~~d~ 71 (220)
++++...+||.+||..|++=
T Consensus 37 Q~~Kql~KA~NIAKse~drd 56 (199)
T 3ub0_A 37 QLLKQLTKACNIAKSEFERE 56 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHH
Confidence 56667788888888887653
No 190
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=20.74 E-value=1.8e+02 Score=18.67 Aligned_cols=81 Identities=15% Similarity=0.185 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhcccc
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHTMSS 175 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~~s~ 175 (220)
+.|...|++++.. .|.++. ...+.+..++. .++.++|+...++++... ..+
T Consensus 26 ~~A~~~~~~~~~~-----~~~~~~---~~~~la~~~~~-~~~~~~A~~~~~~~~~~~-------~~~------------- 76 (125)
T 1na0_A 26 DEAIEYYQKALEL-----DPNNAE---AWYNLGNAYYK-QGDYDEAIEYYQKALELD-------PNN------------- 76 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHC-------TTC-------------
T ss_pred HHHHHHHHHHHHH-----CcCcHH---HHHHHHHHHHH-hCCHHHHHHHHHHHHHhC-------Ccc-------------
Confidence 6788888888764 344432 33444554444 688888887776665321 001
Q ss_pred cchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 176 SGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 176 ~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
..-+..++.+-.+..+|++-....+++.+.
T Consensus 77 ---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 77 ---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 106 (125)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 122334555555666777777766666553
No 191
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=20.52 E-value=1.3e+02 Score=27.81 Aligned_cols=89 Identities=16% Similarity=0.225 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhhc---
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYSCIGASRDTKRSVCLLCEIFHT--- 172 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~AfdeAi~eld~~~~d~~lilq~L~~--- 172 (220)
+.|...|+.+ .|..+|+..|-. +++.+.|++.+++|- ..+ ..+..+..|=.+++
T Consensus 139 eeA~~~Y~~a----------~n~~~LA~~L~~-------Lg~yq~AVea~~KA~-----~~~-~Wk~v~~aCv~~~ef~l 195 (449)
T 1b89_A 139 DAAKLLYNNV----------SNFGRLASTLVH-------LGEYQAAVDGARKAN-----STR-TWKEVCFACVDGKEFRL 195 (449)
T ss_dssp TTHHHHHHHT----------TCHHHHHHHHHT-------TTCHHHHHHHHHHHT-----CHH-HHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHh----------hhHHHHHHHHHH-------hccHHHHHHHHHHcC-----Cch-hHHHHHHHHHHcCcHHH
Confidence 4566666644 466666655544 788888888888771 221 11222211111111
Q ss_pred ------ccccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHhc
Q psy5989 173 ------MSSSGEKEELVQRAKLAEQAERYDDMAAAMKAVTET 208 (220)
Q Consensus 173 ------~s~~s~r~~~~~~akl~eq~ery~~m~~~~~~~~~~ 208 (220)
... ..=+++..+..+=+.+.||+|....+++.+..
T Consensus 196 A~~~~l~L~-~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~l 236 (449)
T 1b89_A 196 AQMCGLHIV-VHADELEELINYYQDRGYFEELITMLEAALGL 236 (449)
T ss_dssp HHHTTTTTT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHH-hCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCC
Confidence 111 22244556777888999999999999998653
No 192
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=20.38 E-value=2e+02 Score=19.13 Aligned_cols=47 Identities=13% Similarity=0.009 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcchhcccchhHHHHHHHhcChHHHHHHHHHHHHH
Q psy5989 96 EDSQKAYQEAFDIAKSKMQPTHPIRLGLALNFSVFYYEIINSPARACHLAKQVKYS 151 (220)
Q Consensus 96 e~a~~aYq~A~eiA~~~L~pt~PirLGL~LN~SVF~yEIl~~~~~A~~iAk~Afde 151 (220)
+.|...|++++.+ .|.++. ...+.+..+.. .++.++|+..-++++..
T Consensus 36 ~~A~~~~~~al~~-----~p~~~~---~~~~la~~~~~-~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 36 DAALPHLRAALDF-----DPTYSV---AWKWLGKTLQG-QGDRAGARQAWESGLAA 82 (115)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5677777777753 344433 23455555444 78988888877776654
Done!