Query psy599
Match_columns 247
No_of_seqs 175 out of 2133
Neff 11.1
Searched_HMMs 29240
Date Fri Aug 16 23:45:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy599.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/599hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1oy3_D Transcription factor in 100.0 2.6E-42 9E-47 266.6 21.6 214 27-246 2-264 (282)
2 1k1a_A B-cell lymphoma 3-encod 100.0 8.8E-41 3E-45 252.4 24.5 215 27-246 2-222 (241)
3 2xai_A ASB-9, ankyrin repeat a 100.0 5.7E-41 2E-45 256.6 23.5 203 33-245 2-204 (261)
4 3b7b_A Euchromatic histone-lys 100.0 1.3E-40 4.6E-45 250.9 22.7 209 28-245 5-215 (237)
5 3d9h_A CDNA FLJ77766, highly s 100.0 1.8E-40 6.1E-45 256.9 23.7 208 28-245 53-260 (285)
6 1yyh_A HN1;, notch 1, ankyrin 100.0 3.3E-41 1.1E-45 256.8 19.1 210 27-244 3-227 (253)
7 2f8y_A Notch homolog 1, transl 100.0 8E-40 2.7E-44 244.5 24.7 197 30-235 21-219 (223)
8 2dzn_A Probable 26S proteasome 100.0 6.7E-40 2.3E-44 245.6 23.7 205 34-246 2-214 (228)
9 3aji_A 26S proteasome non-ATPa 100.0 8.1E-40 2.8E-44 245.7 23.9 204 33-244 5-209 (231)
10 3aji_A 26S proteasome non-ATPa 100.0 4.3E-40 1.5E-44 247.2 21.9 212 8-232 18-230 (231)
11 1yyh_A HN1;, notch 1, ankyrin 100.0 1.8E-39 6E-44 247.2 23.6 201 25-234 48-250 (253)
12 4b93_B Ankyrin repeat domain-c 100.0 1E-40 3.5E-45 255.7 16.6 217 29-246 6-224 (269)
13 2rfa_A Transient receptor pote 100.0 2.1E-39 7.3E-44 243.6 22.4 198 33-238 2-228 (232)
14 3utm_A Tankyrase-1; tankyrase, 100.0 8.4E-39 2.9E-43 254.1 26.5 205 31-244 55-317 (351)
15 3kea_A K1L; tropism, ANK repea 100.0 8.4E-40 2.9E-44 253.1 18.8 220 3-240 6-228 (285)
16 3hra_A Ankyrin repeat family p 100.0 1.2E-38 4.3E-43 234.3 23.6 192 31-230 2-201 (201)
17 1ikn_D Protein (I-kappa-B-alph 100.0 1.6E-40 5.4E-45 250.5 11.7 201 29-234 3-211 (236)
18 1wdy_A 2-5A-dependent ribonucl 100.0 2.8E-37 9.7E-42 238.4 27.7 205 31-244 36-257 (285)
19 1wdy_A 2-5A-dependent ribonucl 100.0 1.6E-37 5.6E-42 239.8 24.1 199 30-237 68-283 (285)
20 2etb_A Transient receptor pote 100.0 8.2E-39 2.8E-43 243.9 16.6 200 34-238 2-252 (256)
21 1s70_B 130 kDa myosin-binding 100.0 2.8E-38 9.6E-43 246.1 19.6 207 31-246 37-271 (299)
22 4gpm_A Engineered protein OR26 100.0 1E-37 3.6E-42 222.5 20.3 158 78-235 6-164 (169)
23 1k1a_A B-cell lymphoma 3-encod 100.0 1.9E-38 6.7E-43 239.5 17.1 195 28-231 40-240 (241)
24 1n11_A Ankyrin; clathrin, BAND 100.0 1E-37 3.5E-42 255.1 22.4 203 33-244 178-381 (437)
25 1n11_A Ankyrin; clathrin, BAND 100.0 1.4E-37 4.8E-42 254.3 23.0 195 31-234 11-206 (437)
26 3ljn_A Hypothetical protein; a 100.0 2.6E-38 9E-43 252.9 18.1 195 31-236 50-273 (364)
27 3ljn_A Hypothetical protein; a 100.0 1.9E-37 6.5E-42 247.9 21.8 206 29-245 15-249 (364)
28 2pnn_A Transient receptor pote 100.0 1.7E-38 6E-43 244.3 14.3 210 28-238 7-265 (273)
29 3eu9_A Huntingtin-interacting 100.0 1.6E-36 5.4E-41 228.7 24.7 198 29-234 37-237 (240)
30 4b93_B Ankyrin repeat domain-c 100.0 1.2E-38 4E-43 244.4 11.7 196 28-232 46-244 (269)
31 3b7b_A Euchromatic histone-lys 100.0 6.5E-37 2.2E-41 230.7 21.1 191 29-228 39-231 (237)
32 2fo1_E LIN-12 protein; beta-ba 100.0 7.6E-38 2.6E-42 250.8 16.5 212 32-244 123-350 (373)
33 2fo1_E LIN-12 protein; beta-ba 100.0 3.4E-37 1.2E-41 247.1 20.1 196 28-232 160-371 (373)
34 2xai_A ASB-9, ankyrin repeat a 100.0 7.5E-37 2.6E-41 233.7 21.0 192 28-232 30-222 (261)
35 3d9h_A CDNA FLJ77766, highly s 100.0 6.8E-37 2.3E-41 236.8 20.6 213 30-244 11-226 (285)
36 2dzn_A Probable 26S proteasome 100.0 6.1E-37 2.1E-41 229.5 19.5 209 7-229 13-227 (228)
37 3eu9_A Huntingtin-interacting 100.0 9.3E-37 3.2E-41 230.0 20.4 208 29-245 4-215 (240)
38 4gpm_A Engineered protein OR26 100.0 2.5E-36 8.7E-41 215.3 20.2 158 36-202 6-163 (169)
39 3jxi_A Vanilloid receptor-rela 100.0 9.7E-37 3.3E-41 232.9 17.4 202 31-237 2-255 (260)
40 3utm_A Tankyrase-1; tankyrase, 100.0 3.8E-36 1.3E-40 238.8 21.3 207 31-245 21-285 (351)
41 2f8y_A Notch homolog 1, transl 100.0 2E-36 6.8E-41 226.0 16.3 192 45-244 2-195 (223)
42 4g8k_A 2-5A-dependent ribonucl 100.0 1.6E-34 5.4E-39 228.7 27.2 203 32-235 57-301 (337)
43 1oy3_D Transcription factor in 100.0 6E-36 2.1E-40 230.9 18.2 184 27-219 38-270 (282)
44 4g8k_A 2-5A-dependent ribonucl 100.0 5.7E-35 2E-39 231.2 23.3 203 29-235 120-329 (337)
45 2rfm_A Putative ankyrin repeat 100.0 6.5E-35 2.2E-39 213.0 17.8 162 69-230 28-190 (192)
46 3v31_A Ankyrin repeat family A 100.0 2.2E-34 7.4E-39 205.6 19.3 162 75-236 2-164 (167)
47 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.8E-34 9.4E-39 205.5 19.4 158 73-230 11-169 (169)
48 4hbd_A KN motif and ankyrin re 100.0 5.3E-35 1.8E-39 225.1 16.3 192 33-231 75-274 (276)
49 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.9E-34 6.3E-39 204.9 16.9 157 75-232 4-162 (162)
50 3v30_A DNA-binding protein rfx 100.0 2.7E-34 9.3E-39 206.1 17.1 168 35-210 3-171 (172)
51 1s70_B 130 kDa myosin-binding 100.0 3.1E-34 1.1E-38 223.2 18.8 194 29-231 68-289 (299)
52 3v30_A DNA-binding protein rfx 100.0 5E-34 1.7E-38 204.7 17.5 166 76-241 2-169 (172)
53 2rfm_A Putative ankyrin repeat 100.0 1E-33 3.5E-38 206.6 19.0 164 26-198 27-190 (192)
54 3v31_A Ankyrin repeat family A 100.0 2E-33 6.7E-38 200.6 17.0 161 33-202 2-162 (167)
55 3kea_A K1L; tropism, ANK repea 100.0 9E-34 3.1E-38 219.2 16.3 172 69-242 24-196 (285)
56 2rfa_A Transient receptor pote 100.0 3.8E-33 1.3E-37 209.4 18.5 159 75-233 2-184 (232)
57 2y1l_E Darpin-8.4; hydrolase-i 100.0 7.8E-33 2.7E-37 197.9 19.3 159 31-198 11-169 (169)
58 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.3E-33 1.1E-37 198.4 16.5 159 32-200 3-162 (162)
59 1awc_B Protein (GA binding pro 100.0 1.2E-32 4E-37 193.8 18.4 149 77-226 3-152 (153)
60 3f6q_A Integrin-linked protein 100.0 4.6E-33 1.6E-37 200.9 15.1 165 75-239 4-170 (179)
61 1ikn_D Protein (I-kappa-B-alph 100.0 5.4E-34 1.8E-38 214.7 10.5 175 71-245 3-189 (236)
62 3twr_A Tankyrase-2; ankyrin re 100.0 3.3E-33 1.1E-37 199.1 13.8 159 73-232 5-165 (165)
63 3f6q_A Integrin-linked protein 100.0 1.6E-32 5.3E-37 198.2 16.3 164 32-203 3-166 (179)
64 3twr_A Tankyrase-2; ankyrin re 100.0 6.4E-33 2.2E-37 197.6 13.9 160 31-199 5-164 (165)
65 3hra_A Ankyrin repeat family p 100.0 6.3E-32 2.1E-36 198.4 18.9 172 74-245 3-183 (201)
66 1bd8_A P19INK4D CDK4/6 inhibit 100.0 6.8E-32 2.3E-36 190.5 17.9 152 76-229 2-155 (156)
67 1awc_B Protein (GA binding pro 100.0 1.1E-31 3.7E-36 188.8 18.1 151 34-194 2-152 (153)
68 2etb_A Transient receptor pote 100.0 3.3E-32 1.1E-36 207.4 14.5 171 75-245 1-226 (256)
69 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2E-31 6.7E-36 188.1 17.5 154 34-197 2-155 (156)
70 4hbd_A KN motif and ankyrin re 100.0 3.7E-31 1.3E-35 203.6 20.0 165 26-198 103-273 (276)
71 2pnn_A Transient receptor pote 100.0 9.5E-32 3.2E-36 206.7 16.1 181 30-210 50-270 (273)
72 3jxi_A Vanilloid receptor-rela 100.0 2.7E-32 9.3E-37 208.2 12.8 172 32-203 44-253 (260)
73 1sw6_A Regulatory protein SWI6 100.0 1.3E-32 4.5E-37 216.7 11.2 196 34-246 97-322 (327)
74 1sw6_A Regulatory protein SWI6 100.0 2E-32 6.9E-37 215.6 12.1 165 37-218 134-327 (327)
75 1ycs_B 53BP2, P53BP2; ankyrin 100.0 9.4E-32 3.2E-36 202.8 10.7 165 73-238 2-170 (239)
76 2vge_A RELA-associated inhibit 100.0 1.8E-34 6.2E-39 216.0 -6.1 187 29-227 16-208 (229)
77 1ycs_B 53BP2, P53BP2; ankyrin 100.0 6.3E-32 2.2E-36 203.7 5.7 178 32-219 3-193 (239)
78 1d9s_A Cyclin-dependent kinase 100.0 2.7E-30 9.1E-35 178.1 12.7 130 101-231 4-135 (136)
79 1d9s_A Cyclin-dependent kinase 100.0 1.1E-29 3.9E-34 174.9 13.5 132 68-200 4-136 (136)
80 1bi7_B P16INK4A, MTS1, multipl 100.0 1.5E-29 5E-34 178.5 11.8 143 71-214 7-151 (156)
81 3t8k_A Uncharacterized protein 100.0 1.6E-29 5.4E-34 183.0 10.5 156 76-233 6-180 (186)
82 2vge_A RELA-associated inhibit 100.0 4.1E-31 1.4E-35 197.8 1.1 173 70-245 15-193 (229)
83 1n0r_A 4ANK, 4 ankyrin repeats 100.0 6.7E-28 2.3E-32 163.6 16.4 124 76-199 2-125 (126)
84 1n0r_A 4ANK, 4 ankyrin repeats 100.0 5.2E-28 1.8E-32 164.2 15.3 125 108-232 1-126 (126)
85 1bi7_B P16INK4A, MTS1, multipl 100.0 9.3E-29 3.2E-33 174.4 11.5 140 103-243 6-147 (156)
86 2jab_A H10-2-G3; HER2, darpin, 100.0 4.3E-28 1.5E-32 167.0 14.6 122 109-230 14-136 (136)
87 3t8k_A Uncharacterized protein 100.0 5.7E-29 2E-33 180.1 9.8 158 34-202 6-181 (186)
88 2jab_A H10-2-G3; HER2, darpin, 100.0 5.5E-28 1.9E-32 166.5 14.1 126 73-198 11-136 (136)
89 2aja_A Ankyrin repeat family p 100.0 8E-31 2.7E-35 208.9 -1.5 201 21-235 79-347 (376)
90 3c5r_A BARD-1, BRCA1-associate 99.9 4.6E-28 1.6E-32 167.1 8.2 127 104-230 5-132 (137)
91 2aja_A Ankyrin repeat family p 99.9 1.7E-29 5.7E-34 201.3 -0.3 180 35-237 66-255 (376)
92 3deo_A Signal recognition part 99.9 4.8E-27 1.6E-31 169.9 10.8 140 73-229 41-181 (183)
93 3ui2_A Signal recognition part 99.9 7.9E-27 2.7E-31 176.3 11.1 142 74-232 43-185 (244)
94 3c5r_A BARD-1, BRCA1-associate 99.9 8.5E-27 2.9E-31 160.7 8.6 129 71-199 5-133 (137)
95 2b0o_E UPLC1; arfgap, structur 99.9 2.6E-26 9E-31 178.3 11.7 138 77-219 152-298 (301)
96 3aaa_C Myotrophin, protein V-1 99.9 1.2E-25 4E-30 152.1 11.0 107 108-214 6-113 (123)
97 3ehr_A Osteoclast-stimulating 99.9 5.1E-26 1.7E-30 169.5 9.3 126 109-234 73-200 (222)
98 3aaa_C Myotrophin, protein V-1 99.9 1.4E-25 4.7E-30 151.8 10.3 114 73-186 4-117 (123)
99 3deo_A Signal recognition part 99.9 2.1E-25 7.1E-30 161.3 11.7 140 31-197 41-181 (183)
100 3ehr_A Osteoclast-stimulating 99.9 8.6E-26 3E-30 168.3 9.4 132 72-203 69-201 (222)
101 3ui2_A Signal recognition part 99.9 1.6E-25 5.4E-30 169.2 10.5 142 32-200 43-185 (244)
102 2b0o_E UPLC1; arfgap, structur 99.9 1.3E-24 4.5E-29 168.8 12.0 146 34-188 151-299 (301)
103 1dcq_A PYK2-associated protein 99.9 1.9E-23 6.5E-28 160.5 17.9 163 72-234 62-265 (278)
104 3lvq_E ARF-GAP with SH3 domain 99.9 5.8E-24 2E-28 176.2 15.0 136 76-216 132-276 (497)
105 3jue_A Arfgap with coiled-coil 99.9 5.8E-24 2E-28 168.8 13.4 144 75-218 198-348 (368)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.3E-23 8E-28 133.6 11.9 90 142-231 2-92 (93)
107 1dcq_A PYK2-associated protein 99.9 4.2E-23 1.4E-27 158.6 15.3 172 30-201 62-264 (278)
108 3lvq_E ARF-GAP with SH3 domain 99.9 4.8E-23 1.6E-27 170.7 15.7 128 109-236 132-269 (497)
109 3jue_A Arfgap with coiled-coil 99.9 5.5E-23 1.9E-27 163.2 14.2 126 107-232 197-326 (368)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.9 6.8E-23 2.3E-27 131.4 12.0 92 109-200 2-93 (93)
111 2l6b_A NR1C; ankyrin, consensu 99.9 1.3E-22 4.3E-27 135.4 8.1 98 75-172 8-105 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.9 2.1E-22 7.2E-27 134.3 8.7 108 104-211 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 1.2E-19 4.2E-24 119.8 10.3 89 138-226 20-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 3.1E-19 1.1E-23 117.9 10.5 88 107-194 22-109 (110)
115 4g26_A Pentatricopeptide repea 68.9 11 0.00038 31.0 6.3 145 37-195 32-198 (501)
116 4g26_A Pentatricopeptide repea 63.3 11 0.00039 30.9 5.3 141 80-228 33-199 (501)
117 3zrh_A Ubiquitin thioesterase 57.0 37 0.0013 27.1 6.6 61 152-230 32-92 (454)
118 1gp8_A Protein (scaffolding pr 46.3 27 0.00091 17.2 3.6 19 38-56 17-35 (40)
119 3zrh_A Ubiquitin thioesterase 33.7 1.2E+02 0.0041 24.3 6.2 49 82-130 28-90 (454)
120 3k49_A MRNA-binding protein PU 22.5 54 0.0018 25.6 2.7 26 31-56 75-100 (369)
No 1
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.6e-42 Score=266.57 Aligned_cols=214 Identities=26% Similarity=0.281 Sum_probs=188.6
Q ss_pred HhhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccC
Q psy599 27 VTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKT 106 (247)
Q Consensus 27 ~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~ 106 (247)
+...+..|.||||+|+..|+.+++++|++.+.. ....+..+..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 75 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAG------HEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAE 75 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTT------SGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC------cccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 345688999999999999999999999987322 11246677889999999999999999999999999999999
Q ss_pred CCCChhHHHHHhcCChHHHHHHHHCCCC-----------------------------------------------cccCC
Q psy599 107 RTNSTPLRAACFDGHFGVVKYLVEHGAD-----------------------------------------------FEVSN 139 (247)
Q Consensus 107 ~~~~~~l~~a~~~~~~~~~~~Ll~~~~~-----------------------------------------------~~~~~ 139 (247)
..|.||||+|+..++.+++++|++++.+ ++..+
T Consensus 76 ~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (282)
T 1oy3_D 76 RGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAEN 155 (282)
T ss_dssp TTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCC
T ss_pred CCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcC
Confidence 9999999999999999999999987754 56678
Q ss_pred CCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCC-CCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHc
Q psy599 140 RHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSK-GNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVV 217 (247)
Q Consensus 140 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~ 217 (247)
..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..
T Consensus 156 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 235 (282)
T 1oy3_D 156 YDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLR 235 (282)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTS
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHc
Confidence 88999999999999999999999999999998854 99999999999999999999999999997 88999999999999
Q ss_pred CCHHHHHHHHhcChhhhhhccchhhhccC
Q psy599 218 GHQHIVEYLIGLNIVSRKEKIDALELLGA 246 (247)
Q Consensus 218 ~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~ 246 (247)
++.+++++|+++|++...+..++.+.+..
T Consensus 236 ~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 264 (282)
T 1oy3_D 236 PNPILARLLRAHGAPEPEDGGDKLSPCSS 264 (282)
T ss_dssp SCHHHHHHHHHTTCCCCCCC---------
T ss_pred CCcHHHHHHHHcCCCcCcCCCcccccccc
Confidence 99999999999999999998888877654
No 2
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=8.8e-41 Score=252.41 Aligned_cols=215 Identities=26% Similarity=0.297 Sum_probs=193.3
Q ss_pred HhhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccC
Q psy599 27 VTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKT 106 (247)
Q Consensus 27 ~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~ 106 (247)
+...|.+|.||||.|+..|+.+++++|++.... .+...+..+..|.||||+|+..|+.+++++|++.|++++.++
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-----~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 76 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQ-----GGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALD 76 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHH-----TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHh-----cCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccC
Confidence 456789999999999999999999999983211 123345667789999999999999999999999999999999
Q ss_pred CCCChhHHHHHhcCChHHHHHHHHCCC----CcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccC-CCCCcHHHH
Q psy599 107 RTNSTPLRAACFDGHFGVVKYLVEHGA----DFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKS-SKGNTALHD 181 (247)
Q Consensus 107 ~~~~~~l~~a~~~~~~~~~~~Ll~~~~----~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~t~l~~ 181 (247)
..|.+|||+|+..++.+++++|++.+. +++..+..|.||||.|+..++.+++++|++.|++++..+ ..|.||||+
T Consensus 77 ~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~ 156 (241)
T 1k1a_A 77 RHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIH 156 (241)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHH
Confidence 999999999999999999999999887 788889999999999999999999999999999999888 789999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhhhccC
Q psy599 182 CAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALELLGA 246 (247)
Q Consensus 182 a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~ 246 (247)
|+..|+.+++++|+++|++++. +..|.||||+|+..++.+++++|++.|++...+..++.+.++.
T Consensus 157 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 222 (241)
T 1k1a_A 157 AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMV 222 (241)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTT
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHH
Confidence 9999999999999999999997 8899999999999999999999999999999888877776653
No 3
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5.7e-41 Score=256.56 Aligned_cols=203 Identities=25% Similarity=0.351 Sum_probs=189.2
Q ss_pred CCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChh
Q psy599 33 GGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTP 112 (247)
Q Consensus 33 ~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 112 (247)
+|+||||.|+..|+.+++++|++. +...+..+..|.||||+|+..|+.+++++|++.|++++.++..|.||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~ 72 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQ---------GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTP 72 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT---------TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC---------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 689999999999999999999987 22345667789999999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHH
Q psy599 113 LRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILK 192 (247)
Q Consensus 113 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~ 192 (247)
||+|+..|+.+++++|++++++++. +..|.||+|.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.++++
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 151 (261)
T 2xai_A 73 LFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVK 151 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHH
Confidence 9999999999999999999999875 456999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhhhcc
Q psy599 193 LLLSHGARMDVDSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALELLG 245 (247)
Q Consensus 193 ~Ll~~g~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 245 (247)
+|+++|++++.+..|.||||+|+..++.+++++|++.|++.+.++.++.+.++
T Consensus 152 ~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~ 204 (261)
T 2xai_A 152 KLLESGADVNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVE 204 (261)
T ss_dssp HHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred HHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhh
Confidence 99999999998888999999999999999999999999999998888877765
No 4
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.3e-40 Score=250.93 Aligned_cols=209 Identities=28% Similarity=0.378 Sum_probs=195.0
Q ss_pred hhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCC
Q psy599 28 TKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTR 107 (247)
Q Consensus 28 ~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 107 (247)
...+..|.||||.|+..|+.+++++|++. +...+..+..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 75 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQA---------GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDA 75 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHT---------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCT
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHc---------CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCC
Confidence 34577899999999999999999999987 223455667899999999999999999999999999999999
Q ss_pred CCChhHHHHHhcCChHHHHHHHHCC-CCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Q psy599 108 TNSTPLRAACFDGHFGVVKYLVEHG-ADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAG 186 (247)
Q Consensus 108 ~~~~~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 186 (247)
.|.+|||+|+..|+.+++++|++++ .+++..+..|.||||.|+..++.+++++|++.|++++.++..|.||||+|+..|
T Consensus 76 ~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 76 EGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSG 155 (237)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCC
Confidence 9999999999999999999999998 889999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhhhcc
Q psy599 187 SIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALELLG 245 (247)
Q Consensus 187 ~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 245 (247)
+.+++++|+++|++++. +..|.||||+|+..++.+++++|+++|++...+..++.+.++
T Consensus 156 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~ 215 (237)
T 3b7b_A 156 CVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQ 215 (237)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHH
Confidence 99999999999999987 888999999999999999999999999999988887777654
No 5
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=256.90 Aligned_cols=208 Identities=24% Similarity=0.329 Sum_probs=193.9
Q ss_pred hhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCC
Q psy599 28 TKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTR 107 (247)
Q Consensus 28 ~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 107 (247)
...+..|.||||.|+..|+.+++++|++. +...+..+..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 123 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQ---------GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA 123 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHT---------TCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCT
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHC---------CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCC
Confidence 44578899999999999999999999986 223456677899999999999999999999999999999999
Q ss_pred CCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Q psy599 108 TNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGS 187 (247)
Q Consensus 108 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 187 (247)
.|.||||+|+..|+.+++++|++++++++..+ .|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 124 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 202 (285)
T 3d9h_A 124 DWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ 202 (285)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 99999999999999999999999999987544 59999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhhhcc
Q psy599 188 IEILKLLLSHGARMDVDSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALELLG 245 (247)
Q Consensus 188 ~~~i~~Ll~~g~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 245 (247)
.+++++|+++|++++.+..|.||||+|+..++.+++++|++.|++.+.++.++.+.++
T Consensus 203 ~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~ 260 (285)
T 3d9h_A 203 RACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVE 260 (285)
T ss_dssp HHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGG
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 9999999999999988888999999999999999999999999999998888877765
No 6
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.3e-41 Score=256.76 Aligned_cols=210 Identities=24% Similarity=0.276 Sum_probs=164.8
Q ss_pred HhhccCCCchHHHHHHhcC-------------cHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHH
Q psy599 27 VTKFKFGGATPLIMACRNG-------------HKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQ 93 (247)
Q Consensus 27 ~~~~~~~g~t~L~~A~~~g-------------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~ 93 (247)
++..+..|.||||+|+..| +.+++++|++.+. ......+..|.||||+|+..|+.++++
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~--------~~~~~~d~~g~t~L~~A~~~g~~~~v~ 74 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGA--------SLHNQTDRTGETALHLAARYSRSDAAK 74 (253)
T ss_dssp ---------------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccC--------CcccccCCCCCcHHHHHHHcCCHHHHH
Confidence 3456788999999999987 8999999998732 222445678999999999999999999
Q ss_pred HHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCC-CcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccC
Q psy599 94 FLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGA-DFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKS 172 (247)
Q Consensus 94 ~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 172 (247)
+|++.|++++.++..|.||||+|+..++.+++++|++++. +++..+..|.||||+|+..++.+++++|++.|++++.++
T Consensus 75 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d 154 (253)
T 1yyh_A 75 RLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVD 154 (253)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBC
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcC
Confidence 9999999999999999999999999999999999999986 889999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhhhc
Q psy599 173 SKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALELL 244 (247)
Q Consensus 173 ~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~ 244 (247)
..|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..++.+++++|+++|++...+...+.+.+
T Consensus 155 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl 227 (253)
T 1yyh_A 155 DLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPR 227 (253)
T ss_dssp TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHH
Confidence 9999999999999999999999999999987 88999999999999999999999999999888777665554
No 7
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=8e-40 Score=244.47 Aligned_cols=197 Identities=25% Similarity=0.285 Sum_probs=185.4
Q ss_pred ccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCC-CCCccCCC
Q psy599 30 FKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGA-KVNSKTRT 108 (247)
Q Consensus 30 ~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~-~~~~~~~~ 108 (247)
.+..|.||||.|+..|+.+++++|++. +...+..+..|.||||+|+..|+.+++++|++.+. +++.++..
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 91 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDAAKRLLEA---------SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD 91 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHT---------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTT
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHHc---------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence 467899999999999999999999987 22345567889999999999999999999999987 88999999
Q ss_pred CChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCH
Q psy599 109 NSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSI 188 (247)
Q Consensus 109 ~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~ 188 (247)
|.||||+|+..++.+++++|++++++++..+..|.||||.|+..++.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 92 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 171 (223)
T 2f8y_A 92 GTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSY 171 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhh
Q psy599 189 EILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRK 235 (247)
Q Consensus 189 ~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 235 (247)
+++++|+++|++++. +..|.||+++|+..++.+++++|+++|+....
T Consensus 172 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~ 219 (223)
T 2f8y_A 172 ETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSP 219 (223)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC
T ss_pred HHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCccc
Confidence 999999999999987 88999999999999999999999999987543
No 8
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=6.7e-40 Score=245.63 Aligned_cols=205 Identities=23% Similarity=0.349 Sum_probs=188.2
Q ss_pred CchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhC--CCCCc-cCCCCC
Q psy599 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHG--AKVNS-KTRTNS 110 (247)
Q Consensus 34 g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~--~~~~~-~~~~~~ 110 (247)
|.||||.|+..|+.+++++|++.... .....+..|.||||+|+..|+.+++++|++.| .+++. .+..|.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~--------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~ 73 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPS--------LLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGW 73 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGG--------GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSC
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCcc--------ccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCC
Confidence 78999999999999999999987432 23446778999999999999999999999999 55555 778999
Q ss_pred hhHHHHHhcCChHHHHHHHHCC--CCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCH
Q psy599 111 TPLRAACFDGHFGVVKYLVEHG--ADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSI 188 (247)
Q Consensus 111 ~~l~~a~~~~~~~~~~~Ll~~~--~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~ 188 (247)
||||+|+..|+.+++++|++++ .+++..+..|.||||.|+..++.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus 74 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 153 (228)
T 2dzn_A 74 TPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL 153 (228)
T ss_dssp CHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH
Confidence 9999999999999999999998 88899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcC-CCCCC-CCCCCCHHHHHHHcCCHHHHHHHH-hcChhhhhhccchhhhccC
Q psy599 189 EILKLLLSHG-ARMDV-DSYGMTPLLAAAVVGHQHIVEYLI-GLNIVSRKEKIDALELLGA 246 (247)
Q Consensus 189 ~~i~~Ll~~g-~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~~~~~~~~ 246 (247)
+++++|+++| ++++. +..|.||||+|+..++.+++++|+ +.|++...+..++.+.++.
T Consensus 154 ~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~ 214 (228)
T 2dzn_A 154 KLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDV 214 (228)
T ss_dssp HHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGG
T ss_pred HHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHH
Confidence 9999999999 88886 889999999999999999999999 8999999888887776653
No 9
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=8.1e-40 Score=245.72 Aligned_cols=204 Identities=25% Similarity=0.289 Sum_probs=168.8
Q ss_pred CCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChh
Q psy599 33 GGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTP 112 (247)
Q Consensus 33 ~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 112 (247)
.+.+|||.|+..|+.+.++++++..+.. ....+..|.||||+|+..|+.+++++|++.|++++.++..|.||
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~--------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~ 76 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSL--------ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSP 76 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGG--------GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCH
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhh--------hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCH
Confidence 4678888888888888888888763322 34556778888888888888888888888888888888888888
Q ss_pred HHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHH
Q psy599 113 LRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILK 192 (247)
Q Consensus 113 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~ 192 (247)
||+|+..|+.+++++|++++++++..+..|.||||.|+..++.+++++|++.|.+++.++..|.||||+|+..|+.++++
T Consensus 77 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 156 (231)
T 3aji_A 77 LHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVH 156 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhhhc
Q psy599 193 LLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALELL 244 (247)
Q Consensus 193 ~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~ 244 (247)
+|+++|++++. +..|.||||+|+..++.+++++|+++|++...+..++.+.+
T Consensus 157 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 209 (231)
T 3aji_A 157 ILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPL 209 (231)
T ss_dssp HHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHH
T ss_pred HHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 88888888876 77888888888888888888888888888877666665544
No 10
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.3e-40 Score=247.19 Aligned_cols=212 Identities=28% Similarity=0.365 Sum_probs=192.5
Q ss_pred HHHHHHHHHHhhcHHHHHHHhhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcC
Q psy599 8 EYTHYQAFLEARTHEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAG 87 (247)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~ 87 (247)
+.+.++.+++... ..+...+..|.||||.|+..|+.+++++|++. +...+..+..|.||||+|+..|
T Consensus 18 ~~~~v~~ll~~~~----~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~~ 84 (231)
T 3aji_A 18 KLDELKERILADK----SLATRTDQDSRTALHWACSAGHTEIVEFLLQL---------GVPVNDKDDAGWSPLHIAASAG 84 (231)
T ss_dssp CHHHHHHHHHHCG----GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT---------TCCSCCCCTTSCCHHHHHHHHT
T ss_pred CHHHHHHHHHhch----hhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHh---------CCCCCCcCCCCCCHHHHHHHcC
Confidence 3444555554332 23555688999999999999999999999987 2234556778999999999999
Q ss_pred CHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCC
Q psy599 88 HLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNAD 167 (247)
Q Consensus 88 ~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~ 167 (247)
+.+++++|+++|++++.++..|.||||+|+..++.+++++|++++.+++..+..|.||||.|+..|+.+++++|+++|++
T Consensus 85 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 164 (231)
T 3aji_A 85 XDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS 164 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChh
Q psy599 168 MNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIV 232 (247)
Q Consensus 168 ~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 232 (247)
++.++..|.||||+|+..|+.+++++|+++|++++. +..|.||+++|+..++.+++++|++.|+.
T Consensus 165 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 165 TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 999999999999999999999999999999999987 89999999999999999999999998864
No 11
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.8e-39 Score=247.23 Aligned_cols=201 Identities=23% Similarity=0.254 Sum_probs=181.6
Q ss_pred HHHhhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCC-CCC
Q psy599 25 QMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGA-KVN 103 (247)
Q Consensus 25 ~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~-~~~ 103 (247)
......+..|.||||+|+..|+.+++++|++. +...+..+..|.||||+|+..|+.+++++|++.+. +++
T Consensus 48 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~ 118 (253)
T 1yyh_A 48 SLHNQTDRTGETALHLAARYSRSDAAKRLLEA---------SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 118 (253)
T ss_dssp ----CCCTTSCCHHHHHHHTTCHHHHHHHHHT---------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTT
T ss_pred CcccccCCCCCcHHHHHHHcCCHHHHHHHHHc---------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 33445578999999999999999999999987 23345667889999999999999999999999987 899
Q ss_pred ccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy599 104 SKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCA 183 (247)
Q Consensus 104 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~ 183 (247)
.++..|.||||+|+..++.+++++|++++++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus 119 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 198 (253)
T 1yyh_A 119 ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAA 198 (253)
T ss_dssp CCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhh
Q psy599 184 EAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSR 234 (247)
Q Consensus 184 ~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 234 (247)
..|+.+++++|+++|++++. +..|.||+++|+..|+.+++++|.+....+.
T Consensus 199 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~~~ 250 (253)
T 1yyh_A 199 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHHH 250 (253)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC------
T ss_pred HCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhhhcc
Confidence 99999999999999999997 8999999999999999999999997655443
No 12
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=255.74 Aligned_cols=217 Identities=27% Similarity=0.392 Sum_probs=165.3
Q ss_pred hccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCH-HHHHHHHHhCCCCCccCC
Q psy599 29 KFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHL-PIVQFLVEHGAKVNSKTR 107 (247)
Q Consensus 29 ~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~-~~~~~Ll~~~~~~~~~~~ 107 (247)
..|..+.++|+.||..|+.+++++|++....+... ........+..+.|||+.|+..+.. .+++.|++.|++++.++.
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~-~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~ 84 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLED-AEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQ 84 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC-----------------------------------------CCCCTTCCCT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCccccc-ccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCC
Confidence 34666789999999999999999999875443322 2233455667889999999988765 478899999999999999
Q ss_pred CCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Q psy599 108 TNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGS 187 (247)
Q Consensus 108 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 187 (247)
.|.||||+|+..|+.+++++|++.+++++..+..|.||++.|+..++.+++++|++.|++++.+|..|.||||+|+..|+
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~ 164 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGH 164 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhhhccC
Q psy599 188 IEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALELLGA 246 (247)
Q Consensus 188 ~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~ 246 (247)
.+++++|+++|++++. +..|.||||+|+..|+.+++++|++.|++.+.++.++.++++.
T Consensus 165 ~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~ 224 (269)
T 4b93_B 165 HELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDC 224 (269)
T ss_dssp GGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGG
T ss_pred HHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 9999999999999987 8889999999999999999999999999999888888777653
No 13
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.1e-39 Score=243.59 Aligned_cols=198 Identities=24% Similarity=0.283 Sum_probs=178.4
Q ss_pred CCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCC-----CccCC
Q psy599 33 GGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKV-----NSKTR 107 (247)
Q Consensus 33 ~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~-----~~~~~ 107 (247)
.|.||||.|+..|+.+++++|++..+.+ .+..+..|.||||+|+..|+.+++++|++.|+++ +.++.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~--------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~ 73 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE--------VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELY 73 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC--------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC--------cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCC
Confidence 5899999999999999999999864333 3556788999999999999999999999999876 66778
Q ss_pred CCChhHHHHHhcCChHHHHHHHHCCCCcccCCC-------------CCCCHHHHHHHcChHHHHHHHHhcCCCccccCCC
Q psy599 108 TNSTPLRAACFDGHFGVVKYLVEHGADFEVSNR-------------HGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSK 174 (247)
Q Consensus 108 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-------------~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 174 (247)
.|.||||+|+..|+.+++++|++++++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 153 (232)
T 2rfa_A 74 EGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSL 153 (232)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence 899999999999999999999999999988765 7999999999999999999999999999999999
Q ss_pred CCcHHHHHHHhCCHHHH----HHHHHcCCCCC------C-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhcc
Q psy599 175 GNTALHDCAEAGSIEIL----KLLLSHGARMD------V-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKI 238 (247)
Q Consensus 175 ~~t~l~~a~~~~~~~~i----~~Ll~~g~~~~------~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 238 (247)
|.||||+|+..|+.+++ ++|+++|++.. . +..|.|||++|+..|+.+++++|+++|........
T Consensus 154 g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 228 (232)
T 2rfa_A 154 GNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAHH 228 (232)
T ss_dssp SCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-----
T ss_pred CCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhhhc
Confidence 99999999999999988 99999999873 3 88899999999999999999999999988766543
No 14
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=8.4e-39 Score=254.10 Aligned_cols=205 Identities=28% Similarity=0.376 Sum_probs=188.6
Q ss_pred cCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCC
Q psy599 31 KFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNS 110 (247)
Q Consensus 31 ~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 110 (247)
+..|.||||+|+..|+.+++++|++. +..++..+..|.||||+|+..|+.+++++|+++|++++.++..|.
T Consensus 55 d~~g~t~L~~A~~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~ 125 (351)
T 3utm_A 55 DGRKSTPLHLAAGYNRVRIVQLLLQH---------GADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQF 125 (351)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHT---------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc---------CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 56799999999999999999999987 233456678899999999999999999999999999999999999
Q ss_pred hhHHHHHhcCChHHHHHHHHCCCCcccCC---------------------------------------------------
Q psy599 111 TPLRAACFDGHFGVVKYLVEHGADFEVSN--------------------------------------------------- 139 (247)
Q Consensus 111 ~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~--------------------------------------------------- 139 (247)
||||+|+..|+.+++++|+++|++++..+
T Consensus 126 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 205 (351)
T 3utm_A 126 TPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINF 205 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccc
Confidence 99999999999999999999998876544
Q ss_pred ---CCCCCHHHHHHHc---ChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHH
Q psy599 140 ---RHGHTCLMIACYK---GHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLL 212 (247)
Q Consensus 140 ---~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~ 212 (247)
..+.||+|.|+.. ++.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++. +..|.||||
T Consensus 206 ~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~ 285 (351)
T 3utm_A 206 KQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALH 285 (351)
T ss_dssp CCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 4567999999998 779999999999999999999999999999999999999999999999996 899999999
Q ss_pred HHHHcCCHHHHHHHHhcChhhhhhccchhhhc
Q psy599 213 AAAVVGHQHIVEYLIGLNIVSRKEKIDALELL 244 (247)
Q Consensus 213 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~ 244 (247)
+|+..++.+++++|+++|+++..++.++.+.+
T Consensus 286 ~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal 317 (351)
T 3utm_A 286 RAALAGHLQTCRLLLSYGSDPSIISLQGFTAA 317 (351)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHcCcHHHHHHHHHcCCCCCCcCCCCCChh
Confidence 99999999999999999999988887776654
No 15
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=8.4e-40 Score=253.05 Aligned_cols=220 Identities=19% Similarity=0.194 Sum_probs=195.1
Q ss_pred ccchhHHHHHHHHHHhhcHHHHHHHhhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHH
Q psy599 3 DLTLDEYTHYQAFLEARTHEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWC 82 (247)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~ 82 (247)
.+...+.+.+..++.... +...+..|.||||+|+..|+.+++++|++. +.++ +.. .|.||||+
T Consensus 6 ~i~~~~~~~v~~lL~~~~------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~--------~~~--~g~t~L~~ 68 (285)
T 3kea_A 6 RINTWKSKQLKSFLSSKD------TFKADVHGHSASYYAIADNNVRLVCTLLNA-GALK--------NLL--ENEFPLHQ 68 (285)
T ss_dssp TGGGCCHHHHHHHHHSTT------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TGGG--------SCC--TTCCHHHH
T ss_pred HHHhcCHHHHHHHHHhCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCC--------CCC--CCCCHHHH
Confidence 444555666777776542 567789999999999999999999999987 2222 222 48999999
Q ss_pred HHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCC-CCHHHHHHHcChHHHHHHH
Q psy599 83 AAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHG-HTCLMIACYKGHYRIVKYL 161 (247)
Q Consensus 83 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~-~t~l~~a~~~~~~~~~~~L 161 (247)
|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..| .||||.|+..|+.+++++|
T Consensus 69 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~L 148 (285)
T 3kea_A 69 AATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYF 148 (285)
T ss_dssp HTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 7999999999999999999
Q ss_pred HhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCH-HHHHHHcCCHHHHHHHHhcChhhhhhccc
Q psy599 162 LSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTP-LLAAAVVGHQHIVEYLIGLNIVSRKEKID 239 (247)
Q Consensus 162 l~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~-l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 239 (247)
+++|.+.... ..|.||||+|+..|+.+++++|+++|++++. +..|.|| ||+|+..++.+++++|+++|++.......
T Consensus 149 l~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~ 227 (285)
T 3kea_A 149 LSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANLE 227 (285)
T ss_dssp HTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTGG
T ss_pred HhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCChh
Confidence 9999877333 2789999999999999999999999999997 8889998 99999999999999999999999887654
Q ss_pred h
Q psy599 240 A 240 (247)
Q Consensus 240 ~ 240 (247)
.
T Consensus 228 a 228 (285)
T 3kea_A 228 N 228 (285)
T ss_dssp G
T ss_pred h
Confidence 3
No 16
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.2e-38 Score=234.30 Aligned_cols=192 Identities=27% Similarity=0.364 Sum_probs=179.5
Q ss_pred cCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCC
Q psy599 31 KFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNS 110 (247)
Q Consensus 31 ~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 110 (247)
+..+.||||.|+..|+.+.++.|+...+.+ .+..+..|.||||+|+..|+.+++++|++.|++++.++..|.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~--------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 73 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQ--------VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISD 73 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCC--------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCC--------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 456889999999999999999999874333 355677899999999999999999999999999999999999
Q ss_pred hhHHHHHhcCChHHHHHHH-HCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhCC-
Q psy599 111 TPLRAACFDGHFGVVKYLV-EHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLN-ADMNRKSSKGNTALHDCAEAGS- 187 (247)
Q Consensus 111 ~~l~~a~~~~~~~~~~~Ll-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~t~l~~a~~~~~- 187 (247)
||||+|+..|+.+++++|+ ..+.+++..+..|.||||.|+..++.+++++|++.| .+++.++..|.||||+|+..++
T Consensus 74 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~ 153 (201)
T 3hra_A 74 SPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREG 153 (201)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCC
T ss_pred CHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccc
Confidence 9999999999999999999 667799999999999999999999999999999999 8999999999999999999998
Q ss_pred ----HHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy599 188 ----IEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLN 230 (247)
Q Consensus 188 ----~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g 230 (247)
.+++++|+++|++++. +..|.|||++|+..++.+++++|+++|
T Consensus 154 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 154 NQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp SHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred hhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9999999999999997 889999999999999999999999987
No 17
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.6e-40 Score=250.47 Aligned_cols=201 Identities=25% Similarity=0.366 Sum_probs=181.0
Q ss_pred hccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCC
Q psy599 29 KFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRT 108 (247)
Q Consensus 29 ~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~ 108 (247)
..+.+|.||||.|+..|+.+++++|++..... +..++..+..|.||||+|+..|+.+++++|++.|++++.++..
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 77 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGD-----LAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFR 77 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC----------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTT
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhcc-----HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 35788999999999999999999999763321 1235667788999999999999999999999999999999999
Q ss_pred CChhHHHHHhcCChHHHHHHHHCCCC------cccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCC-CCCcHHHH
Q psy599 109 NSTPLRAACFDGHFGVVKYLVEHGAD------FEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSS-KGNTALHD 181 (247)
Q Consensus 109 ~~~~l~~a~~~~~~~~~~~Ll~~~~~------~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~~t~l~~ 181 (247)
|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~ 157 (236)
T 1ikn_D 78 GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHL 157 (236)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Confidence 99999999999999999999999865 467788899999999999999999999999999999987 99999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhh
Q psy599 182 CAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSR 234 (247)
Q Consensus 182 a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 234 (247)
|+..|+.+++++|+++|++++. +..|.|||++|+..++.+++++|+++|++..
T Consensus 158 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 158 AVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp HHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred HHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 9999999999999999999997 8899999999999999999999999999876
No 18
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.8e-37 Score=238.45 Aligned_cols=205 Identities=31% Similarity=0.411 Sum_probs=140.4
Q ss_pred cCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCC
Q psy599 31 KFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNS 110 (247)
Q Consensus 31 ~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 110 (247)
+..|.||||.|+..|+.+++++|++.+ ......+..|.||||+|+..|+.+++++|+++|++++.++..|.
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g---------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 106 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHG---------ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGF 106 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTT---------CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcC---------CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccC
Confidence 566888999999999999999998762 22344455677777777777777777777777777777777777
Q ss_pred hhHHHHHhcCChHHHHHHHHCCCCcccC----------CCCCCCHHHHHHHcChHHHHHHHHhc-CCCccccCCCCCcHH
Q psy599 111 TPLRAACFDGHFGVVKYLVEHGADFEVS----------NRHGHTCLMIACYKGHYRIVKYLLSL-NADMNRKSSKGNTAL 179 (247)
Q Consensus 111 ~~l~~a~~~~~~~~~~~Ll~~~~~~~~~----------~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l 179 (247)
||||+|+..|+.+++++|++++.+++.. +..|.||||.|+..|+.+++++|++. |.+++..+..|.|||
T Consensus 107 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l 186 (285)
T 1wdy_A 107 TAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNAL 186 (285)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHH
T ss_pred CHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHH
Confidence 7777777777777777777776666655 55566777777777777777766665 666666666666666
Q ss_pred HHHHHhCC----HHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHh-cChhhhhhccchhhhc
Q psy599 180 HDCAEAGS----IEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIG-LNIVSRKEKIDALELL 244 (247)
Q Consensus 180 ~~a~~~~~----~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~~ 244 (247)
|.|+..++ .+++++|+++|++++. +..|.||||+|+..++.+++++|++ .|++.+.+..++.+.+
T Consensus 187 ~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l 257 (285)
T 1wdy_A 187 IHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTAL 257 (285)
T ss_dssp HHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHH
T ss_pred HHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHH
Confidence 66666666 6666666666666664 5566666666666666666666666 5666655555444433
No 19
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-37 Score=239.81 Aligned_cols=199 Identities=27% Similarity=0.372 Sum_probs=185.8
Q ss_pred ccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCcc----
Q psy599 30 FKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSK---- 105 (247)
Q Consensus 30 ~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~---- 105 (247)
.+..|.||||+|+..|+.+++++|++. +...+..+..|.||||+|+..|+.+++++|++.|++++.+
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~ 138 (285)
T 1wdy_A 68 RKKNGATPFLLAAIAGSVKLLKLFLSK---------GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTK 138 (285)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT---------TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc---------CCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccH
Confidence 367899999999999999999999987 2334566778999999999999999999999999999877
Q ss_pred ------CCCCChhHHHHHhcCChHHHHHHHHC-CCCcccCCCCCCCHHHHHHHcCh----HHHHHHHHhcCCCccccCCC
Q psy599 106 ------TRTNSTPLRAACFDGHFGVVKYLVEH-GADFEVSNRHGHTCLMIACYKGH----YRIVKYLLSLNADMNRKSSK 174 (247)
Q Consensus 106 ------~~~~~~~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~ 174 (247)
+..|.+|||+|+..|+.+++++|++. +.+++..+..|.||+|.|+..++ .+++++|+++|++++.++..
T Consensus 139 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~ 218 (285)
T 1wdy_A 139 EDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER 218 (285)
T ss_dssp HHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTT
T ss_pred HHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCC
Confidence 67899999999999999999999987 99999999999999999999999 99999999999999999999
Q ss_pred CCcHHHHHHHhCCHHHHHHHHH-cCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhc
Q psy599 175 GNTALHDCAEAGSIEILKLLLS-HGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEK 237 (247)
Q Consensus 175 ~~t~l~~a~~~~~~~~i~~Ll~-~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 237 (247)
|.||||+|+..|+.+++++|++ .|++++. +..|.|||++|+..++.+++++|+++|+++..++
T Consensus 219 g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 219 GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred CCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999 8999987 8899999999999999999999999999987654
No 20
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=8.2e-39 Score=243.90 Aligned_cols=200 Identities=26% Similarity=0.311 Sum_probs=175.7
Q ss_pred CchHHHHHHhcCcHH----HHHHHHHhcccCccccccccccccCcCCCCHHHHHHHc---CCHHHHHHHHHhCCCCCcc-
Q psy599 34 GATPLIMACRNGHKE----IVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAA---GHLPIVQFLVEHGAKVNSK- 105 (247)
Q Consensus 34 g~t~L~~A~~~g~~~----~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~---~~~~~~~~Ll~~~~~~~~~- 105 (247)
|.||||.|+..|+.+ ++++|++. +.+++.. ....+..|.||||+|+.. |+.+++++|++.|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~-g~~i~~~----~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~ 76 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWN-SKYLTDS----AYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPK 76 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHH-TCCTTSG----GGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSS
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHc-CCCcccc----cccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchh
Confidence 789999999999997 55666655 2222110 012678899999999999 9999999999998776533
Q ss_pred ----------CCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCC-------------CCCHHHHHHHcChHHHHHHHH
Q psy599 106 ----------TRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRH-------------GHTCLMIACYKGHYRIVKYLL 162 (247)
Q Consensus 106 ----------~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-------------~~t~l~~a~~~~~~~~~~~Ll 162 (247)
+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+
T Consensus 77 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 156 (256)
T 2etb_A 77 PLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLL 156 (256)
T ss_dssp CGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 367999999999999999999999999999998886 999999999999999999999
Q ss_pred h---cCCCccccCCCCCcHHHHHHH--hCCHH-------HHHHHHHcCCCC-------CC-CCCCCCHHHHHHHcCCHHH
Q psy599 163 S---LNADMNRKSSKGNTALHDCAE--AGSIE-------ILKLLLSHGARM-------DV-DSYGMTPLLAAAVVGHQHI 222 (247)
Q Consensus 163 ~---~~~~~~~~~~~~~t~l~~a~~--~~~~~-------~i~~Ll~~g~~~-------~~-~~~g~t~l~~A~~~~~~~~ 222 (247)
+ .|++++.+|..|+||||+|+. .++.+ ++++|+++|+++ +. +..|.||||+|+..|+.++
T Consensus 157 ~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 157 ENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp HCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred hccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 9 999999999999999999999 77888 999999999999 65 8899999999999999999
Q ss_pred HHHHHhcChhhhhhcc
Q psy599 223 VEYLIGLNIVSRKEKI 238 (247)
Q Consensus 223 ~~~Ll~~g~~~~~~~~ 238 (247)
+++|+++|........
T Consensus 237 v~~Ll~~g~~~~~~~~ 252 (256)
T 2etb_A 237 FRHILQREFSGAAAHH 252 (256)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCCCCCCccc
Confidence 9999999998876654
No 21
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=2.8e-38 Score=246.13 Aligned_cols=207 Identities=29% Similarity=0.388 Sum_probs=187.0
Q ss_pred cCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCC
Q psy599 31 KFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNS 110 (247)
Q Consensus 31 ~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 110 (247)
+..|.|||+.||..|+.+++++|++.+ ..++..+..|.||||+|+..|+.+++++|++.|++++.++..|.
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g---------~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~ 107 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERG---------ADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGW 107 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHC---------CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcC---------CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 446789999999999999999999872 23455677899999999999999999999999999999999999
Q ss_pred hhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhc-CCCcc--------------------
Q psy599 111 TPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSL-NADMN-------------------- 169 (247)
Q Consensus 111 ~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~-------------------- 169 (247)
||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..+++++++.. +.+++
T Consensus 108 tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (299)
T 1s70_B 108 IPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNS 187 (299)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999877643 33332
Q ss_pred ------ccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhh
Q psy599 170 ------RKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALE 242 (247)
Q Consensus 170 ------~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~ 242 (247)
..+..|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|++.|++...++.++.+
T Consensus 188 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t 267 (299)
T 1s70_B 188 GHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQT 267 (299)
T ss_dssp TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 3556799999999999999999999999999997 889999999999999999999999999999988888877
Q ss_pred hccC
Q psy599 243 LLGA 246 (247)
Q Consensus 243 ~~~~ 246 (247)
.++-
T Consensus 268 ~l~~ 271 (299)
T 1s70_B 268 AFDV 271 (299)
T ss_dssp TTTS
T ss_pred HHHH
Confidence 7654
No 22
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1e-37 Score=222.49 Aligned_cols=158 Identities=40% Similarity=0.509 Sum_probs=149.0
Q ss_pred CHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHH
Q psy599 78 PPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRI 157 (247)
Q Consensus 78 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 157 (247)
+.|+.|++.|+.++++.|++.|++++.++..|.||+++|+..++.+++++|++.|++++.++..|.||||+|+..|+.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhh
Q psy599 158 VKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRK 235 (247)
Q Consensus 158 ~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 235 (247)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++. +..|+|||++|+..|+.+++++|+++|++...
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 9999999999999999999999999999999999999999999997 89999999999999999999999999997643
No 23
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.9e-38 Score=239.55 Aligned_cols=195 Identities=21% Similarity=0.255 Sum_probs=177.2
Q ss_pred hhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCC----CCC
Q psy599 28 TKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGA----KVN 103 (247)
Q Consensus 28 ~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~----~~~ 103 (247)
...+..|.||||.|+..|+.+++++|++. +......+..|.||||+|+..|+.+++++|++.+. +++
T Consensus 40 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 110 (241)
T 1k1a_A 40 DIYNNLRQTPLHLAVITTLPSVVRLLVTA---------GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLE 110 (241)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHHT---------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTT
T ss_pred CcccccCCCHHHHHHHcCCHHHHHHHHHc---------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc
Confidence 34467799999999999999999999986 23335567789999999999999999999999987 788
Q ss_pred ccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCC-CCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHH
Q psy599 104 SKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSN-RHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDC 182 (247)
Q Consensus 104 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a 182 (247)
..+..|.+|||+|+..++.+++++|++++++++..+ ..|.||||.|+..++.+++++|+++|++++.++..|.||||+|
T Consensus 111 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 190 (241)
T 1k1a_A 111 ARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSA 190 (241)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHH
T ss_pred ccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 889999999999999999999999999999999888 7899999999999999999999999999999999999999999
Q ss_pred HHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcCh
Q psy599 183 AEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNI 231 (247)
Q Consensus 183 ~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~ 231 (247)
+..|+.+++++|+++|++++. +..|.||+++|+..++.++++.|.++++
T Consensus 191 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 191 SGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred HHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 999999999999999999997 8899999999999999999999998764
No 24
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1e-37 Score=255.14 Aligned_cols=203 Identities=27% Similarity=0.405 Sum_probs=172.6
Q ss_pred CCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChh
Q psy599 33 GGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTP 112 (247)
Q Consensus 33 ~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 112 (247)
.|.||||.|+..|+.+++++|++. +......+..|.||||+|+..|+.+++++|++.|.+++.++..|.||
T Consensus 178 ~g~t~L~~A~~~~~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 248 (437)
T 1n11_A 178 NGLTPLHVAVHHNNLDIVKLLLPR---------GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTP 248 (437)
T ss_dssp SCCCHHHHHHHTTCHHHHHHHGGG---------TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhC---------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 444555555555555555555443 12234455678899999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHH
Q psy599 113 LRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILK 192 (247)
Q Consensus 113 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~ 192 (247)
||+|+..|+.+++++|++++++++..+..|.||||.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.++++
T Consensus 249 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~ 328 (437)
T 1n11_A 249 LHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVK 328 (437)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHH
T ss_pred HHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhhhc
Q psy599 193 LLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALELL 244 (247)
Q Consensus 193 ~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~ 244 (247)
+|+++|++++. +..|.||||+|+..|+.+++++|++.|+++..++.++.+.+
T Consensus 329 ~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l 381 (437)
T 1n11_A 329 FLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPL 381 (437)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHH
T ss_pred HHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHH
Confidence 99999999987 88899999999999999999999999999988777666554
No 25
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-37 Score=254.34 Aligned_cols=195 Identities=34% Similarity=0.440 Sum_probs=95.5
Q ss_pred cCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCC
Q psy599 31 KFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNS 110 (247)
Q Consensus 31 ~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 110 (247)
+..|.||||.|+..|+.+++++|++.+ ...+..+..|.||||+|+..|+.+++++|++.|++++.++..|.
T Consensus 11 ~~~g~t~L~~Aa~~g~~~~v~~Ll~~g---------~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~ 81 (437)
T 1n11_A 11 GESGLTPLHVASFMGHLPIVKNLLQRG---------ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQ 81 (437)
T ss_dssp ----CCHHHHHHHHTCHHHHHHHHHTT---------CCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSC
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcC---------CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Confidence 444555555555555555555555541 11122334445555555555555555555555555555555555
Q ss_pred hhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHH
Q psy599 111 TPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEI 190 (247)
Q Consensus 111 ~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 190 (247)
||||+|+..|+.+++++|+++|++++..+..|.||||.|+..|+.+++++|++.+.+.+..+..|.||||+|+..|+.++
T Consensus 82 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 161 (437)
T 1n11_A 82 TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRV 161 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHH
Confidence 55555555555555555555555555555555555555555555555555555544444444444455555555555555
Q ss_pred HHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhh
Q psy599 191 LKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSR 234 (247)
Q Consensus 191 i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 234 (247)
+++|+++|++++. +..|.|||++|+..++.+++++|++.|....
T Consensus 162 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 206 (437)
T 1n11_A 162 AELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH 206 (437)
T ss_dssp HHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSC
T ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC
Confidence 5555555444443 4444444444444444444444444444433
No 26
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.6e-38 Score=252.88 Aligned_cols=195 Identities=22% Similarity=0.234 Sum_probs=165.0
Q ss_pred cCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHh----CCCCCc--
Q psy599 31 KFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEH----GAKVNS-- 104 (247)
Q Consensus 31 ~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~----~~~~~~-- 104 (247)
+..|.||||+|+..|+.+++++|++.+. ...+..|.||||+|+..|+.+++++|++. |.+++.
T Consensus 50 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-----------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 118 (364)
T 3ljn_A 50 NRFGCTALHLACKFGCVDTAKYLASVGE-----------VHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLL 118 (364)
T ss_dssp CTTCCCHHHHHHHHCCHHHHHHHHHHCC-----------CCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCC-----------CccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHH
Confidence 5567888888888888888888887632 11224678888888888888888888887 666665
Q ss_pred ---------------cCCCCChhHHHHHhcC--ChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCC
Q psy599 105 ---------------KTRTNSTPLRAACFDG--HFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNAD 167 (247)
Q Consensus 105 ---------------~~~~~~~~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~ 167 (247)
++..|.||||+|+..| +.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 198 (364)
T 3ljn_A 119 NECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPS 198 (364)
T ss_dssp TCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSC
T ss_pred hhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 7778899999999999 89999999999999999999999999999999999999999988887
Q ss_pred -----ccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhh
Q psy599 168 -----MNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKE 236 (247)
Q Consensus 168 -----~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 236 (247)
++..+..|.||||+|+..|+.+++++|+++|++++. +..|.|||++|+..|+.+++++|++.|.+....
T Consensus 199 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~ 273 (364)
T 3ljn_A 199 KSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQ 273 (364)
T ss_dssp SSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHH
T ss_pred cccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhh
Confidence 888888999999999999999999999999999887 888999999999999999999999988876543
No 27
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.9e-37 Score=247.91 Aligned_cols=206 Identities=21% Similarity=0.228 Sum_probs=187.6
Q ss_pred hccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCC
Q psy599 29 KFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRT 108 (247)
Q Consensus 29 ~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~ 108 (247)
..+..|.||||.|+..|+.+++++|++. +...+..+..|.||||+|+..|+.+++++|++.|++++. ..
T Consensus 15 ~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~---------g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~ 83 (364)
T 3ljn_A 15 KSDDENMEKIHVAARKGQTDEVRRLIET---------GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WH 83 (364)
T ss_dssp -CCHHHHHHHHHHHHHTCHHHHHHHHHT---------TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHc---------CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cC
Confidence 3467799999999999999999999987 233466778899999999999999999999999996554 57
Q ss_pred CChhHHHHHhcCChHHHHHHHHC----CCCccc-----------------CCCCCCCHHHHHHHcC--hHHHHHHHHhcC
Q psy599 109 NSTPLRAACFDGHFGVVKYLVEH----GADFEV-----------------SNRHGHTCLMIACYKG--HYRIVKYLLSLN 165 (247)
Q Consensus 109 ~~~~l~~a~~~~~~~~~~~Ll~~----~~~~~~-----------------~~~~~~t~l~~a~~~~--~~~~~~~Ll~~~ 165 (247)
|.||||+|+..|+.+++++|++. +.+++. .+..|.||||+|+..| +.+++++|+++|
T Consensus 84 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g 163 (364)
T 3ljn_A 84 GQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG 163 (364)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC
Confidence 89999999999999999999998 777776 8889999999999999 999999999999
Q ss_pred CCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCC-----CCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccc
Q psy599 166 ADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGAR-----MDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKID 239 (247)
Q Consensus 166 ~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~-----~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 239 (247)
++++.++..|.||||+|+..|+.+++++|+++|++ ++. +..|.||||+|+..|+.+++++|+++|++.+....+
T Consensus 164 a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~ 243 (364)
T 3ljn_A 164 ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNE 243 (364)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTT
T ss_pred CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Confidence 99999999999999999999999999999999998 776 888999999999999999999999999999888877
Q ss_pred hhhhcc
Q psy599 240 ALELLG 245 (247)
Q Consensus 240 ~~~~~~ 245 (247)
+.+.++
T Consensus 244 g~tpL~ 249 (364)
T 3ljn_A 244 HTVPLY 249 (364)
T ss_dssp SCCHHH
T ss_pred CCCHHH
Confidence 766654
No 28
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.7e-38 Score=244.32 Aligned_cols=210 Identities=23% Similarity=0.292 Sum_probs=174.3
Q ss_pred hhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHc---CCHHHHHHHHHhCCCC--
Q psy599 28 TKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAA---GHLPIVQFLVEHGAKV-- 102 (247)
Q Consensus 28 ~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~---~~~~~~~~Ll~~~~~~-- 102 (247)
...+..|.||||.|+..|+.++++.|++......... .......+..|.||||+|+.. |+.+++++|++.|+++
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~ 85 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRL-TDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS 85 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCT-TSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhccccc-CCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence 3467889999999999999999999997522111000 001123467899999999987 9999999999987542
Q ss_pred ---------CccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCC--------------CCCCHHHHHHHcChHHHHH
Q psy599 103 ---------NSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNR--------------HGHTCLMIACYKGHYRIVK 159 (247)
Q Consensus 103 ---------~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~--------------~~~t~l~~a~~~~~~~~~~ 159 (247)
...+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.++++
T Consensus 86 ~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~ 165 (273)
T 2pnn_A 86 LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVK 165 (273)
T ss_dssp HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHH
T ss_pred hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence 22566899999999999999999999999999998887 7999999999999999999
Q ss_pred HHHh---cCCCccccCCCCCcHHHHHHHhCC---------HHHHHHHHHcCCCCC--------CCCCCCCHHHHHHHcCC
Q psy599 160 YLLS---LNADMNRKSSKGNTALHDCAEAGS---------IEILKLLLSHGARMD--------VDSYGMTPLLAAAVVGH 219 (247)
Q Consensus 160 ~Ll~---~~~~~~~~~~~~~t~l~~a~~~~~---------~~~i~~Ll~~g~~~~--------~~~~g~t~l~~A~~~~~ 219 (247)
+|++ .|++++.+|..|+||||+|+..|+ .+++++|+++|++++ .+..|.||||+|+..|+
T Consensus 166 ~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~ 245 (273)
T 2pnn_A 166 FLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGK 245 (273)
T ss_dssp HHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhCh
Confidence 9999 999999999999999999999998 899999999999986 38889999999999999
Q ss_pred HHHHHHHHhcCh-hhhhhcc
Q psy599 220 QHIVEYLIGLNI-VSRKEKI 238 (247)
Q Consensus 220 ~~~~~~Ll~~g~-~~~~~~~ 238 (247)
.+++++|+++|+ ++.....
T Consensus 246 ~~iv~~Ll~~ga~dp~~~~~ 265 (273)
T 2pnn_A 246 IGVLAYILQREIHEPECRHA 265 (273)
T ss_dssp HHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHCCCCCchhhhh
Confidence 999999999999 5554443
No 29
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=228.71 Aligned_cols=198 Identities=26% Similarity=0.325 Sum_probs=174.8
Q ss_pred hccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCC
Q psy599 29 KFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRT 108 (247)
Q Consensus 29 ~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~ 108 (247)
..+..|.||||.|+..|+.+++++|++.+... ....+..|.||||+|+..|+.+++++|++.|++++.++..
T Consensus 37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~--------~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 108 (240)
T 3eu9_A 37 QPDKENVTLLHWAAINNRIDLVKYYISKGAIV--------DQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGE 108 (240)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--------TCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcc--------hhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCC
Confidence 34678999999999999999999999873322 2333456899999999999999999999999999999999
Q ss_pred CChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCh-HHHHHHHHhcCCCccccCC-CCCcHHHHHHHhC
Q psy599 109 NSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGH-YRIVKYLLSLNADMNRKSS-KGNTALHDCAEAG 186 (247)
Q Consensus 109 ~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~-~~~~~~Ll~~~~~~~~~~~-~~~t~l~~a~~~~ 186 (247)
|.+|+|+|+..++.+++++|++++++++..+..|.||+|.|+..++ .+++++|++.+++++..+. .|.||||+|+..|
T Consensus 109 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~ 188 (240)
T 3eu9_A 109 GCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAG 188 (240)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcC
Confidence 9999999999999999999999999999999999999999996665 8899999999999998886 8999999999999
Q ss_pred CHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhh
Q psy599 187 SIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSR 234 (247)
Q Consensus 187 ~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 234 (247)
+.+++++|+++|++++. +..|.||+++|+..++.+++++|++.|....
T Consensus 189 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 189 NTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp CHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC----
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccC
Confidence 99999999999999987 8889999999999999999999999887654
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=244.36 Aligned_cols=196 Identities=27% Similarity=0.404 Sum_probs=151.0
Q ss_pred hhccCCCchHHHHHHhcCcH-HHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccC
Q psy599 28 TKFKFGGATPLIMACRNGHK-EIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKT 106 (247)
Q Consensus 28 ~~~~~~g~t~L~~A~~~g~~-~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~ 106 (247)
...+..|.|||+.|+..++. .++++|++. +..++..+..|.||||+|+..|+.+++++|++.|++++.++
T Consensus 46 ~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~---------Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~ 116 (269)
T 4b93_B 46 SAADPEFCHPLCQCPKCAPAQKRLAKVPAS---------GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARN 116 (269)
T ss_dssp -----------------------------C---------CCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCC
T ss_pred cccCccCCCHHHHHHHhCCHHHHHHHHHHC---------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccC
Confidence 34466789999999998875 477888875 33346677899999999999999999999999999999999
Q ss_pred CCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Q psy599 107 RTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAG 186 (247)
Q Consensus 107 ~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 186 (247)
..|.||+++|+..++.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus 117 ~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g 196 (269)
T 4b93_B 117 ADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEK 196 (269)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred CCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCC-HHHHHHHHhcChh
Q psy599 187 SIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGH-QHIVEYLIGLNIV 232 (247)
Q Consensus 187 ~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~-~~~~~~Ll~~g~~ 232 (247)
+.+++++|+++|++++. +..|+|||++|+..++ .++++++...+..
T Consensus 197 ~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~ 244 (269)
T 4b93_B 197 HVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVAS 244 (269)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC-------
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchh
Confidence 99999999999999997 8999999999998775 4555556555543
No 31
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6.5e-37 Score=230.70 Aligned_cols=191 Identities=28% Similarity=0.438 Sum_probs=177.8
Q ss_pred hccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhC-CCCCccCC
Q psy599 29 KFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHG-AKVNSKTR 107 (247)
Q Consensus 29 ~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~ 107 (247)
..+..|.||||.|+..|+.+++++|++. +...+..+..|.||||+|+..|+.+++++|++.+ .+++.++.
T Consensus 39 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~ 109 (237)
T 3b7b_A 39 TCSEDQRTPLMEAAENNHLEAVKYLIKA---------GALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD 109 (237)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTT---------TCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCT
T ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHhC---------CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC
Confidence 3467899999999999999999999976 2334556778999999999999999999999998 78999999
Q ss_pred CCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Q psy599 108 TNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGS 187 (247)
Q Consensus 108 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 187 (247)
.|.+|||+|+..++.+++++|+++|++++..+..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 110 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 189 (237)
T 3b7b_A 110 GGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENR 189 (237)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHh
Q psy599 188 IEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIG 228 (247)
Q Consensus 188 ~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~ 228 (247)
.+++++|+++|++++. +..|.||+++|+..++.+.+..+++
T Consensus 190 ~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 190 YDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred HhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 8999999999999999877766654
No 32
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=7.6e-38 Score=250.85 Aligned_cols=212 Identities=25% Similarity=0.318 Sum_probs=185.0
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCCh
Q psy599 32 FGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNST 111 (247)
Q Consensus 32 ~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 111 (247)
..|.||||+|+..|+.+++++|+........ ..+...+..|..|.||||+|+..|+.+++++|++.|++++.++..|.|
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll-~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t 201 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECI-AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERS 201 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHH-HTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCC
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH-hcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCC
Confidence 6799999999999999999888742100000 013334667789999999999999999999999999999999999999
Q ss_pred hHHHHHhcCChHHHHHHHHCC---CCcccCCCCCCCHHHHHHHcC---hHHHHHHHHhcCCCccc--------cCCCCCc
Q psy599 112 PLRAACFDGHFGVVKYLVEHG---ADFEVSNRHGHTCLMIACYKG---HYRIVKYLLSLNADMNR--------KSSKGNT 177 (247)
Q Consensus 112 ~l~~a~~~~~~~~~~~Ll~~~---~~~~~~~~~~~t~l~~a~~~~---~~~~~~~Ll~~~~~~~~--------~~~~~~t 177 (247)
|||+|+..|+.+++++|++++ .+++..+..|.||||+|+..+ +.+++++|+++|++++. .+..|.|
T Consensus 202 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t 281 (373)
T 2fo1_E 202 ALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRT 281 (373)
T ss_dssp HHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCC
T ss_pred HHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCC
Confidence 999999999999999999987 788889999999999999988 89999999999998875 5678999
Q ss_pred HHHHHHHhCCHHHHHHHHHcC-CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhhhc
Q psy599 178 ALHDCAEAGSIEILKLLLSHG-ARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALELL 244 (247)
Q Consensus 178 ~l~~a~~~~~~~~i~~Ll~~g-~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~ 244 (247)
|||+|+..|+.+++++|+++| ++++. +..|.||||+|+..|+.+++++|+++|++.+.++.++.+.+
T Consensus 282 ~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l 350 (373)
T 2fo1_E 282 ALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTAR 350 (373)
T ss_dssp THHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHH
T ss_pred HHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHH
Confidence 999999999999999999886 88886 88899999999999999999999999999888777665554
No 33
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=3.4e-37 Score=247.07 Aligned_cols=196 Identities=23% Similarity=0.338 Sum_probs=180.2
Q ss_pred hhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhC---CCCCc
Q psy599 28 TKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHG---AKVNS 104 (247)
Q Consensus 28 ~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~---~~~~~ 104 (247)
...+..|.||||+|+..|+.+++++|++. +...+..+..|.||||+|+..|+.+++++|++.+ .+++.
T Consensus 160 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~---------ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 230 (373)
T 2fo1_E 160 NAMDCDENTPLMLAVLARRRRLVAYLMKA---------GADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE 230 (373)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHT---------TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSC
T ss_pred cCCCCCCCCHHHHHHHcChHHHHHHHHHC---------CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhh
Confidence 44578899999999999999999999987 2334566778999999999999999999999987 78999
Q ss_pred cCCCCChhHHHHHhcC---ChHHHHHHHHCCCCccc--------CCCCCCCHHHHHHHcChHHHHHHHHhcC-CCccccC
Q psy599 105 KTRTNSTPLRAACFDG---HFGVVKYLVEHGADFEV--------SNRHGHTCLMIACYKGHYRIVKYLLSLN-ADMNRKS 172 (247)
Q Consensus 105 ~~~~~~~~l~~a~~~~---~~~~~~~Ll~~~~~~~~--------~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~ 172 (247)
.+..|.||||+|+..+ +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++++ ++++.+|
T Consensus 231 ~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d 310 (373)
T 2fo1_E 231 LDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQD 310 (373)
T ss_dssp CCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCC
T ss_pred cCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcC
Confidence 9999999999999998 89999999999998875 5678999999999999999999999886 9999999
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChh
Q psy599 173 SKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIV 232 (247)
Q Consensus 173 ~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 232 (247)
..|.||||+|+..|+.+++++|+++|++++. +..|.|||++|+..|+.+++++|+++|..
T Consensus 311 ~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 311 EDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 9999999999999999999999999999997 88999999999999999999999999875
No 34
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=7.5e-37 Score=233.71 Aligned_cols=192 Identities=26% Similarity=0.380 Sum_probs=175.4
Q ss_pred hhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCC
Q psy599 28 TKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTR 107 (247)
Q Consensus 28 ~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 107 (247)
...+..|.||||+|+..|+.+++++|++. +...+..+..|.||||+|+..|+.+++++|++.|++++.. .
T Consensus 30 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~ 99 (261)
T 2xai_A 30 NIITADHVSPLHEACLGGHLSCVKILLKH---------GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-S 99 (261)
T ss_dssp SCCCTTCCCHHHHHHHHTCHHHHHHHHHT---------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-C
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHC---------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-C
Confidence 44577899999999999999999999987 2334566788999999999999999999999999998864 4
Q ss_pred CCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Q psy599 108 TNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGS 187 (247)
Q Consensus 108 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 187 (247)
.|.||+|+|+..|+.+++++|+++|++++..+..|.||||.|+..++.+++++|+++|++++. +..|.||||+|+..|+
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~ 178 (261)
T 2xai_A 100 DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTAS 178 (261)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCC
Confidence 599999999999999999999999999999999999999999999999999999999999985 7889999999999999
Q ss_pred HHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChh
Q psy599 188 IEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIV 232 (247)
Q Consensus 188 ~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 232 (247)
.+++++|+++|++++. +..|+||+++|+..+ +++++|++++..
T Consensus 179 ~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~ 222 (261)
T 2xai_A 179 EELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLEREGP 222 (261)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCChhhhccccc--cHHHHHHhccCC
Confidence 9999999999999997 899999999999654 589999998764
No 35
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.8e-37 Score=236.77 Aligned_cols=213 Identities=25% Similarity=0.265 Sum_probs=162.9
Q ss_pred ccCCCchHHHHHHhcCcHHHHHHHHHhcccCcccc--ccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCC
Q psy599 30 FKFGGATPLIMACRNGHKEIVEYLVKECKADVEET--GAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTR 107 (247)
Q Consensus 30 ~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~--~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 107 (247)
....|.|+||+|+..|+.+.+..++...+.+.... ........+..|.||||+|+..|+.+++++|++.|++++.++.
T Consensus 11 ~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~ 90 (285)
T 3d9h_A 11 SSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITA 90 (285)
T ss_dssp -------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECT
T ss_pred cchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 45679999999999999888888776543322111 1223456788999999999999999999999999999999999
Q ss_pred CCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Q psy599 108 TNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGS 187 (247)
Q Consensus 108 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 187 (247)
.|.||||+|+..|+.+++++|++++++++..+..|.||||+|+..|+.+++++|++.|++++..+ .|.||||+|+..|+
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~ 169 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGH 169 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTC
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999987654 49999999999999
Q ss_pred HHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhhhc
Q psy599 188 IEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALELL 244 (247)
Q Consensus 188 ~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~ 244 (247)
.+++++|+++|++++. +..|.|||++|+..++.+++++|++.|++.+. ...+-+.+
T Consensus 170 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L 226 (285)
T 3d9h_A 170 VECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPL 226 (285)
T ss_dssp HHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHH
Confidence 9999999999999986 88999999999999999999999999999875 33343433
No 36
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=6.1e-37 Score=229.50 Aligned_cols=209 Identities=22% Similarity=0.347 Sum_probs=182.8
Q ss_pred hHHHHHHHHHHhhcHHHHHHHhhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccc-cCcCCCCHHHHHHH
Q psy599 7 DEYTHYQAFLEARTHEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDH-ETVEGAPPLWCAAA 85 (247)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~-~~~~~~t~l~~A~~ 85 (247)
.+.+.++.+++... ......+..|.||||+|+..|+.+++++|++.+.. ..... .+..|.||||+|+.
T Consensus 13 g~~~~v~~Ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-------~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 13 NEFFKVQELLHSKP----SLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN-------VNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp TCHHHHHHHHHHCG----GGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTT-------CCGGGCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHHhcCc----cccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccc-------ccccccCCCCCCCHHHHHHH
Confidence 34455555554432 33444688999999999999999999999997321 11222 66789999999999
Q ss_pred cCCHHHHHHHHHhC--CCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHh
Q psy599 86 AGHLPIVQFLVEHG--AKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLS 163 (247)
Q Consensus 86 ~~~~~~~~~Ll~~~--~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~ 163 (247)
.|+.+++++|++.| .+++.++..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 161 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG 161 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999998 8889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cC-CCccccCCCCCcHHHHHHHhCCHHHHHHHH-HcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhc
Q psy599 164 LN-ADMNRKSSKGNTALHDCAEAGSIEILKLLL-SHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGL 229 (247)
Q Consensus 164 ~~-~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll-~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~ 229 (247)
.| .+++.+|..|.||||+|+..|+.+++++|+ ++|++++. +..|.||+++|+.. +++++|+++
T Consensus 162 ~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~~ 227 (228)
T 2dzn_A 162 LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLNN 227 (228)
T ss_dssp TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHTT
T ss_pred cCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHhc
Confidence 99 999999999999999999999999999999 99999997 89999999999754 677777753
No 37
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=9.3e-37 Score=229.97 Aligned_cols=208 Identities=25% Similarity=0.322 Sum_probs=188.8
Q ss_pred hccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccC-C
Q psy599 29 KFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKT-R 107 (247)
Q Consensus 29 ~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~ 107 (247)
..+..|.|+|+.|+..|+.+++++|++. +..++..+..|.||||+|+..|+.+++++|++.|.+++... .
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 74 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEA---------GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGD 74 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHT---------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTT
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHc---------CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCC
Confidence 4577899999999999999999999986 23345567789999999999999999999999999887655 4
Q ss_pred CCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Q psy599 108 TNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGS 187 (247)
Q Consensus 108 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 187 (247)
.|.+|||+|+..|+.+++++|++++++++..+..|.||+|.|+..++.+++++|+++|++++.++..|.||||+|+..+.
T Consensus 75 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 75 LNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCC
T ss_pred cCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999997776
Q ss_pred -HHHHHHHHHcCCCCCC-CC-CCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhhhcc
Q psy599 188 -IEILKLLLSHGARMDV-DS-YGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALELLG 245 (247)
Q Consensus 188 -~~~i~~Ll~~g~~~~~-~~-~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 245 (247)
.+++++|++.|++++. +. .|.||||+|+..++.+++++|++.|++......++.+.++
T Consensus 155 ~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 215 (240)
T 3eu9_A 155 SVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALD 215 (240)
T ss_dssp SSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHH
T ss_pred hHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 8999999999999987 44 8999999999999999999999999999887776655543
No 38
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.5e-36 Score=215.30 Aligned_cols=158 Identities=37% Similarity=0.553 Sum_probs=146.8
Q ss_pred hHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHH
Q psy599 36 TPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRA 115 (247)
Q Consensus 36 t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~ 115 (247)
+.|+.||..|+.+++++|++. +..++..|..|.||+|+|+..++.+++++|++.|++++.++..|.||||+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~---------Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~ 76 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN---------GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHH 76 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT---------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHC---------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHH
Confidence 469999999999999999987 33346678899999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHH
Q psy599 116 ACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLL 195 (247)
Q Consensus 116 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll 195 (247)
|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+..|+.+++++|+
T Consensus 77 A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 77 AAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCC
Q psy599 196 SHGARMD 202 (247)
Q Consensus 196 ~~g~~~~ 202 (247)
++|++++
T Consensus 157 ~~GA~ie 163 (169)
T 4gpm_A 157 KQGGWLE 163 (169)
T ss_dssp TC-----
T ss_pred HCCCCcC
Confidence 9999886
No 39
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=9.7e-37 Score=232.93 Aligned_cols=202 Identities=26% Similarity=0.310 Sum_probs=173.7
Q ss_pred cCCCchHHHHHHhcCcHHHHHHHHH----hcccCccccccccccccCcCCCCHHHHHH---HcCCHHHHHHHHHhCCC--
Q psy599 31 KFGGATPLIMACRNGHKEIVEYLVK----ECKADVEETGAVMFDHETVEGAPPLWCAA---AAGHLPIVQFLVEHGAK-- 101 (247)
Q Consensus 31 ~~~g~t~L~~A~~~g~~~~~~~ll~----~~~~~~~~~~~~~~~~~~~~~~t~l~~A~---~~~~~~~~~~Ll~~~~~-- 101 (247)
+..|.|+||.|+..|+.+.++.|++ . +..+... ....+..|.||||+|+ ..|+.+++++|++.|.+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~-~~~~~~~----~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~ 76 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTH-KKRLTDE----EFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTG 76 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHH-TCCTTSG----GGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhc-CCCcchh----hhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhccccc
Confidence 4568899999999999996666665 4 2222111 0123467999999999 67999999999998743
Q ss_pred ---------CCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCC--------------CCCCCHHHHHHHcChHHHH
Q psy599 102 ---------VNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSN--------------RHGHTCLMIACYKGHYRIV 158 (247)
Q Consensus 102 ---------~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~--------------~~~~t~l~~a~~~~~~~~~ 158 (247)
.+..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++
T Consensus 77 ~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 156 (260)
T 3jxi_A 77 NMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIV 156 (260)
T ss_dssp CHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHH
T ss_pred chHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHH
Confidence 44555689999999999999999999999999999988 6899999999999999999
Q ss_pred HHHHh---cCCCccccCCCCCcHHHHHHHhCC---------HHHHHHHHHcCCCC-------CC-CCCCCCHHHHHHHcC
Q psy599 159 KYLLS---LNADMNRKSSKGNTALHDCAEAGS---------IEILKLLLSHGARM-------DV-DSYGMTPLLAAAVVG 218 (247)
Q Consensus 159 ~~Ll~---~~~~~~~~~~~~~t~l~~a~~~~~---------~~~i~~Ll~~g~~~-------~~-~~~g~t~l~~A~~~~ 218 (247)
++|++ .|++++.+|..|+||||+|+..++ .+++++|+++|+++ +. +..|.||||+|+..|
T Consensus 157 ~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 236 (260)
T 3jxi_A 157 HYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTG 236 (260)
T ss_dssp HHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred HHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcC
Confidence 99999 999999999999999999999887 79999999999998 44 889999999999999
Q ss_pred CHHHHHHHHhcChhhhhhc
Q psy599 219 HQHIVEYLIGLNIVSRKEK 237 (247)
Q Consensus 219 ~~~~~~~Ll~~g~~~~~~~ 237 (247)
+.+++++|+++|.......
T Consensus 237 ~~~~v~~Ll~~g~~~~~~~ 255 (260)
T 3jxi_A 237 KIGIFQHIIRREIADAAAH 255 (260)
T ss_dssp CHHHHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHhCCCccccc
Confidence 9999999999999887653
No 40
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.8e-36 Score=238.81 Aligned_cols=207 Identities=28% Similarity=0.324 Sum_probs=187.4
Q ss_pred cCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCC
Q psy599 31 KFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNS 110 (247)
Q Consensus 31 ~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 110 (247)
+..+.|+|+.|+..|+.+.++.++...+.+ .+..+..|.||||+|+..|+.+++++|++.|++++.++..|.
T Consensus 21 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~--------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~ 92 (351)
T 3utm_A 21 GEYKKDELLEAARSGNEEKLMALLTPLNVN--------CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGL 92 (351)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHCCTTTTT--------CCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred ccccchhHHHHHHcCCHHHHHHHHHhcCCC--------cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Confidence 345679999999999999999999763333 455677899999999999999999999999999999999999
Q ss_pred hhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccC------------------
Q psy599 111 TPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKS------------------ 172 (247)
Q Consensus 111 ~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~------------------ 172 (247)
||||+|+..|+.+++++|++++++++..+..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 93 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~ 172 (351)
T 3utm_A 93 VPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRER 172 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHH
T ss_pred cHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999876544
Q ss_pred ------------------------------------CCCCcHHHHHHHh---CCHHHHHHHHHcCCCCCC-CCCCCCHHH
Q psy599 173 ------------------------------------SKGNTALHDCAEA---GSIEILKLLLSHGARMDV-DSYGMTPLL 212 (247)
Q Consensus 173 ------------------------------------~~~~t~l~~a~~~---~~~~~i~~Ll~~g~~~~~-~~~g~t~l~ 212 (247)
..|.||||+|+.. +..+++++|+++|++++. +..|.||||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 252 (351)
T 3utm_A 173 LTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLH 252 (351)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred HHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHH
Confidence 4567999999998 568999999999999987 889999999
Q ss_pred HHHHcCCHHHHHHHHhcChhhhhhccchhhhcc
Q psy599 213 AAAVVGHQHIVEYLIGLNIVSRKEKIDALELLG 245 (247)
Q Consensus 213 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 245 (247)
+|+..|+.+++++|++.|++.+.+...+.+.++
T Consensus 253 ~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~ 285 (351)
T 3utm_A 253 VAAERAHNDVMEVLHKHGAKMNALDSLGQTALH 285 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 999999999999999999999888777666554
No 41
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2e-36 Score=226.01 Aligned_cols=192 Identities=23% Similarity=0.263 Sum_probs=172.2
Q ss_pred CcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHH
Q psy599 45 GHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGV 124 (247)
Q Consensus 45 g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~ 124 (247)
|+.+++++|++++ .......+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++
T Consensus 2 g~~~~i~~Ll~~g--------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 73 (223)
T 2f8y_A 2 DAPAVISDFIYQG--------ASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGV 73 (223)
T ss_dssp ---CCEETTEETT--------CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred CcHHHHHHHHHcC--------CCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 5666677777652 22223446789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCC-CcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC
Q psy599 125 VKYLVEHGA-DFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV 203 (247)
Q Consensus 125 ~~~Ll~~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~ 203 (247)
+++|++++. +++..+..|.||||.|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.
T Consensus 74 v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 153 (223)
T 2f8y_A 74 FQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM 153 (223)
T ss_dssp HHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 999999986 8888999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred -CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhhhc
Q psy599 204 -DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALELL 244 (247)
Q Consensus 204 -~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~ 244 (247)
+..|.|||++|+..++.+++++|+++|++...+...+.+.+
T Consensus 154 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 195 (223)
T 2f8y_A 154 QNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPR 195 (223)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHH
Confidence 88999999999999999999999999999887776665544
No 42
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.6e-34 Score=228.68 Aligned_cols=203 Identities=28% Similarity=0.348 Sum_probs=142.7
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHHhcccCccccc-------------------------cccccccCcCCCCHHHHHHHc
Q psy599 32 FGGATPLIMACRNGHKEIVEYLVKECKADVEETG-------------------------AVMFDHETVEGAPPLWCAAAA 86 (247)
Q Consensus 32 ~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~-------------------------~~~~~~~~~~~~t~l~~A~~~ 86 (247)
..|.||||+|+..|+.+++++|++++.. +.... ....+..+..|.||+|+|+..
T Consensus 57 ~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~ 135 (337)
T 4g8k_A 57 EGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY 135 (337)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHT
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCc-hhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHc
Confidence 3589999999999999999999987432 22111 123445566778888888888
Q ss_pred CCHHHHHHHHHhCCCCCcc----------CCCCChhHHHHHhcCChHHHHHHHH-CCCCcccCCCCCCCHHHHHHHcCh-
Q psy599 87 GHLPIVQFLVEHGAKVNSK----------TRTNSTPLRAACFDGHFGVVKYLVE-HGADFEVSNRHGHTCLMIACYKGH- 154 (247)
Q Consensus 87 ~~~~~~~~Ll~~~~~~~~~----------~~~~~~~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~t~l~~a~~~~~- 154 (247)
|+.++++++++.|++++.. +..|.||||+|+..|+.+++++|++ .|++++..+..|.|+++.++..+.
T Consensus 136 ~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~ 215 (337)
T 4g8k_A 136 GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD 215 (337)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT
T ss_pred CcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc
Confidence 8888888888887766543 3346788888888888888888774 467777777777777766554332
Q ss_pred ---HHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHc-CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhc
Q psy599 155 ---YRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSH-GARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGL 229 (247)
Q Consensus 155 ---~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~-g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~ 229 (247)
..++++|+++|++++.++..|.||||+|+..|+.+++++|++. |++++. +..|+||||+|+..|+.+++++|+++
T Consensus 216 ~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 295 (337)
T 4g8k_A 216 SDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 295 (337)
T ss_dssp TTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT
T ss_pred ccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 3466667777777777777777777777777777777777754 566665 66677777777777777777777777
Q ss_pred Chhhhh
Q psy599 230 NIVSRK 235 (247)
Q Consensus 230 g~~~~~ 235 (247)
|++.+.
T Consensus 296 GAd~n~ 301 (337)
T 4g8k_A 296 GASTDC 301 (337)
T ss_dssp SCSSTT
T ss_pred CCCCCC
Confidence 766543
No 43
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=6e-36 Score=230.91 Aligned_cols=184 Identities=21% Similarity=0.198 Sum_probs=155.9
Q ss_pred HhhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCC-----
Q psy599 27 VTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAK----- 101 (247)
Q Consensus 27 ~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~----- 101 (247)
+...+..|.||||+|+..|+.+++++|++. +..++..+..|.||||+|+..|+.+++++|++.+..
T Consensus 38 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---------ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~ 108 (282)
T 1oy3_D 38 LDLQNDLGQTALHLAAILGEASTVEKLYAA---------GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDA 108 (282)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHT---------TCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHc---------CCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhh
Confidence 556678899999999999999999999987 233456677899999999999999999999987754
Q ss_pred ------------------------------------------CCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCC
Q psy599 102 ------------------------------------------VNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSN 139 (247)
Q Consensus 102 ------------------------------------------~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 139 (247)
++.++..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 188 (282)
T 1oy3_D 109 SDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPE 188 (282)
T ss_dssp -----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC
T ss_pred HHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 56778889999999999999999999999999999988
Q ss_pred CC-CCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHc
Q psy599 140 RH-GHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVV 217 (247)
Q Consensus 140 ~~-~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~ 217 (247)
.. |.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++. +..|.||+++|...
T Consensus 189 ~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~ 268 (282)
T 1oy3_D 189 PTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSD 268 (282)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC-------------
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCc
Confidence 64 99999999999999999999999999999999999999999999999999999999999997 89999999999876
Q ss_pred CC
Q psy599 218 GH 219 (247)
Q Consensus 218 ~~ 219 (247)
..
T Consensus 269 ~~ 270 (282)
T 1oy3_D 269 SD 270 (282)
T ss_dssp --
T ss_pred cc
Confidence 53
No 44
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5.7e-35 Score=231.21 Aligned_cols=203 Identities=26% Similarity=0.316 Sum_probs=174.5
Q ss_pred hccCCCchHHHHHHhcCcHHHHHHHHHhcccCc-cccccccccccCcCCCCHHHHHHHcCCHHHHHHHHH-hCCCCCccC
Q psy599 29 KFKFGGATPLIMACRNGHKEIVEYLVKECKADV-EETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVE-HGAKVNSKT 106 (247)
Q Consensus 29 ~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~-~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~-~~~~~~~~~ 106 (247)
..+..|.||||.|+..|+.++++++++.+.... ...........+..|.||||+|+..|+.+++++|++ .|++++.++
T Consensus 120 ~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d 199 (337)
T 4g8k_A 120 ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACD 199 (337)
T ss_dssp CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCC
T ss_pred hhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccC
Confidence 346789999999999999999999998743221 111122334456679999999999999999999996 599999999
Q ss_pred CCCChhHHHHHhcCC----hHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhc-CCCccccCCCCCcHHHH
Q psy599 107 RTNSTPLRAACFDGH----FGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSL-NADMNRKSSKGNTALHD 181 (247)
Q Consensus 107 ~~~~~~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~ 181 (247)
..|.++++.++..+. ..++++|+++|++++.++..|.||||.|+..++.++++.|++. +++++.+|..|+||||+
T Consensus 200 ~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~ 279 (337)
T 4g8k_A 200 NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLL 279 (337)
T ss_dssp TTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHH
T ss_pred CCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHH
Confidence 999999998876654 3588999999999999999999999999999999999999985 88999999999999999
Q ss_pred HHHhCCHHHHHHHHHcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcChhhhh
Q psy599 182 CAEAGSIEILKLLLSHGARMDVDSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRK 235 (247)
Q Consensus 182 a~~~~~~~~i~~Ll~~g~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 235 (247)
|+..|+.+++++|+++|++++ ..+||++|+..++.+++++|+++|++++.
T Consensus 280 A~~~g~~~iv~~Ll~~GAd~n----~~~~L~~A~~~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 280 AVELKLKKIAELLCKRGASTD----CGDLVMTARRNYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp HHHTTCHHHHHHHHTTSCSST----TCCHHHHHHHTTCHHHHHHHHHTTCCC--
T ss_pred HHHcCCHHHHHHHHHCCCCCC----CCCHHHHHHHcCCHHHHHHHHHCcCCCCC
Confidence 999999999999999999876 45799999999999999999999998764
No 45
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=6.5e-35 Score=213.00 Aligned_cols=162 Identities=26% Similarity=0.344 Sum_probs=156.7
Q ss_pred ccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHH
Q psy599 69 FDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMI 148 (247)
Q Consensus 69 ~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~ 148 (247)
.+..|..|.||||+|+..|+.+++++|++.|.+++.++..|.||||+|+..++.+++++|++++++++..+..|.||||+
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW 107 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHH
Q psy599 149 ACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLI 227 (247)
Q Consensus 149 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll 227 (247)
|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++. +..|.||+++|+..++.+++++|+
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999987 899999999999999999999999
Q ss_pred hcC
Q psy599 228 GLN 230 (247)
Q Consensus 228 ~~g 230 (247)
+.|
T Consensus 188 ~~~ 190 (192)
T 2rfm_A 188 EVR 190 (192)
T ss_dssp HHH
T ss_pred hcc
Confidence 876
No 46
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=2.2e-34 Score=205.60 Aligned_cols=162 Identities=24% Similarity=0.346 Sum_probs=155.7
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCh
Q psy599 75 EGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGH 154 (247)
Q Consensus 75 ~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 154 (247)
.|.||||.|+..|+.+++++|++.+.+++.++..|.||||+|+..|+.+++++|++++++++..+..|.||||.|+..++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhh
Q psy599 155 YRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVS 233 (247)
Q Consensus 155 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~ 233 (247)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++. +..|.||+++|+..++.+++++|++++...
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987 889999999999999999999999988765
Q ss_pred hhh
Q psy599 234 RKE 236 (247)
Q Consensus 234 ~~~ 236 (247)
...
T Consensus 162 ~~~ 164 (167)
T 3v31_A 162 LQN 164 (167)
T ss_dssp CSS
T ss_pred HHH
Confidence 543
No 47
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=2.8e-34 Score=205.47 Aligned_cols=158 Identities=35% Similarity=0.515 Sum_probs=151.2
Q ss_pred CcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHc
Q psy599 73 TVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYK 152 (247)
Q Consensus 73 ~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~ 152 (247)
...+.++++.|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++++++++..+..|.||||.|+..
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALF 90 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 34577899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy599 153 GHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLN 230 (247)
Q Consensus 153 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g 230 (247)
++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++. +..|.||+++|+..++.+++++|++.|
T Consensus 91 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 91 GHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999987 889999999999999999999999987
No 48
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=5.3e-35 Score=225.10 Aligned_cols=192 Identities=24% Similarity=0.318 Sum_probs=176.6
Q ss_pred CCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCC-CCCccCCCCCh
Q psy599 33 GGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGA-KVNSKTRTNST 111 (247)
Q Consensus 33 ~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~-~~~~~~~~~~~ 111 (247)
.+.+++|.|+..|+.+.++.+++... ....+..|..|.||||+|+..|+.+++++|++.|. +++..+..|.|
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~~~~-------~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t 147 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSARLL-------DYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYS 147 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCHHHH-------HHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCC
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHH-------hhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCC
Confidence 35678899999999999999987521 22356778899999999999999999999999998 99999999999
Q ss_pred hHHHHH-----hcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Q psy599 112 PLRAAC-----FDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAG 186 (247)
Q Consensus 112 ~l~~a~-----~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 186 (247)
|+|+|+ ..++.+++++|++.+...+..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|
T Consensus 148 pL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g 227 (276)
T 4hbd_A 148 PIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHG 227 (276)
T ss_dssp HHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCC
Confidence 999999 567899999999999999888999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHH-cCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcCh
Q psy599 187 SIEILKLLLS-HGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNI 231 (247)
Q Consensus 187 ~~~~i~~Ll~-~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~ 231 (247)
+.+++++|++ .|++++. +..|.|||++|+..|+.+++++|++++-
T Consensus 228 ~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 228 HKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp CHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 9999999999 8999997 8999999999999999999999998753
No 49
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=1.9e-34 Score=204.90 Aligned_cols=157 Identities=24% Similarity=0.337 Sum_probs=149.2
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCh
Q psy599 75 EGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGH 154 (247)
Q Consensus 75 ~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 154 (247)
...|+||.|+..|+.+++++|++.|++++.++..|.||||+|+. |+.+++++|++++++++..+..|.||||.|+..++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 35689999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCC-CC-CCCCCCHHHHHHHcCCHHHHHHHHhcChh
Q psy599 155 YRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARM-DV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIV 232 (247)
Q Consensus 155 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~-~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 232 (247)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++. +. +..|.|||++|+..++.+++++|+++|++
T Consensus 83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999984 55 88899999999999999999999999985
No 50
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=2.7e-34 Score=206.07 Aligned_cols=168 Identities=21% Similarity=0.314 Sum_probs=94.9
Q ss_pred chHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHH
Q psy599 35 ATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLR 114 (247)
Q Consensus 35 ~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~ 114 (247)
.||||.|+..|+.+++++|++.+.. ..+..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~--------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 74 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDN--------LVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALS 74 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSG--------GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcc--------cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHH
Confidence 4566666666666666666654221 12334455666666666666666666666666666666666666666
Q ss_pred HHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHH
Q psy599 115 AACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLL 194 (247)
Q Consensus 115 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~L 194 (247)
+|+..++.+++++|++++++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L 154 (172)
T 3v30_A 75 LASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVI 154 (172)
T ss_dssp HHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHH
Confidence 66666666666666666666655555566666666666666666666666666555555566666666666666666666
Q ss_pred HHcCCCCCC-CCCCCCH
Q psy599 195 LSHGARMDV-DSYGMTP 210 (247)
Q Consensus 195 l~~g~~~~~-~~~g~t~ 210 (247)
+++|++... +..|.||
T Consensus 155 ~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 155 ENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHSCC-------
T ss_pred HHHHHHHhcccCCCCCC
Confidence 655555443 3444443
No 51
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.1e-34 Score=223.24 Aligned_cols=194 Identities=28% Similarity=0.367 Sum_probs=168.0
Q ss_pred hccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCC
Q psy599 29 KFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRT 108 (247)
Q Consensus 29 ~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~ 108 (247)
..+..|.||||+|+..|+.+++++|++. +..++..+..|.||||+|+..|+.+++++|+++|++++.++..
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---------ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 138 (299)
T 1s70_B 68 YANVDGLTALHQACIDDNVDMVKFLVEN---------GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSE 138 (299)
T ss_dssp CBCTTCCBHHHHHHHTTCHHHHHHHHHT---------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHC---------CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC
Confidence 3477899999999999999999999986 2334566778999999999999999999999999999999999
Q ss_pred CChhHHHHHhcCChHHHHHHHHC-CCCcc--------------------------cCCCCCCCHHHHHHHcChHHHHHHH
Q psy599 109 NSTPLRAACFDGHFGVVKYLVEH-GADFE--------------------------VSNRHGHTCLMIACYKGHYRIVKYL 161 (247)
Q Consensus 109 ~~~~l~~a~~~~~~~~~~~Ll~~-~~~~~--------------------------~~~~~~~t~l~~a~~~~~~~~~~~L 161 (247)
|.||+|+|+..+..+++++++.. +.+++ ..+..|.||||.|+..|+.+++++|
T Consensus 139 g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 218 (299)
T 1s70_B 139 GDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218 (299)
T ss_dssp SCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHH
T ss_pred CCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHH
Confidence 99999999999999999877742 33332 2456799999999999999999999
Q ss_pred HhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcCh
Q psy599 162 LSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNI 231 (247)
Q Consensus 162 l~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~ 231 (247)
+++|++++.+|..|.||||+|+..|+.+++++|+++|++++. +..|.||+++|+......+.+++-....
T Consensus 219 l~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~l~~l~~~~~~ 289 (299)
T 1s70_B 219 IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKKQNL 289 (299)
T ss_dssp HTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHHHHHHHTTS
T ss_pred HHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999997 8999999999976544444444333443
No 52
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=5e-34 Score=204.67 Aligned_cols=166 Identities=23% Similarity=0.304 Sum_probs=154.1
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCC-CCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCh
Q psy599 76 GAPPLWCAAAAGHLPIVQFLVEHGAK-VNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGH 154 (247)
Q Consensus 76 ~~t~l~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 154 (247)
+.+|||.|+..|+.+++++|++.+.. ++.++..|.||||+|+..|+.+++++|++++++++..+..|.||||+|+..++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence 46899999999999999999999887 78889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhh
Q psy599 155 YRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVS 233 (247)
Q Consensus 155 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~ 233 (247)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++. +..|.||+++|+..++.+++++|+++|+..
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (172)
T 3v30_A 82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL 161 (172)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999987 889999999999999999999999999988
Q ss_pred hhhccchh
Q psy599 234 RKEKIDAL 241 (247)
Q Consensus 234 ~~~~~~~~ 241 (247)
..+.....
T Consensus 162 ~~~~~~~~ 169 (172)
T 3v30_A 162 FQSNLVPA 169 (172)
T ss_dssp SCC-----
T ss_pred hcccCCCC
Confidence 77765543
No 53
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=1e-33 Score=206.64 Aligned_cols=164 Identities=29% Similarity=0.395 Sum_probs=154.6
Q ss_pred HHhhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCcc
Q psy599 26 MVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSK 105 (247)
Q Consensus 26 ~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~ 105 (247)
.+...+..|.||||.|+..|+.+++++|++.+ ...+..+..|.||||+|+..|+.+++++|++.|++++.+
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~---------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 97 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENF---------DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTK 97 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHH---------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhc---------cccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCC
Confidence 45667899999999999999999999999872 234556778999999999999999999999999999999
Q ss_pred CCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHh
Q psy599 106 TRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEA 185 (247)
Q Consensus 106 ~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~ 185 (247)
+..|.||||+|+..++.+++++|++++++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||+++|+..
T Consensus 98 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 177 (192)
T 2rfm_A 98 DFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIF 177 (192)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcC
Q psy599 186 GSIEILKLLLSHG 198 (247)
Q Consensus 186 ~~~~~i~~Ll~~g 198 (247)
|+.+++++|+++|
T Consensus 178 ~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 178 GRQEVIKIFTEVR 190 (192)
T ss_dssp TCHHHHHHHHHHH
T ss_pred CcHHHHHHHHhcc
Confidence 9999999999875
No 54
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=2e-33 Score=200.63 Aligned_cols=161 Identities=24% Similarity=0.354 Sum_probs=152.0
Q ss_pred CCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChh
Q psy599 33 GGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTP 112 (247)
Q Consensus 33 ~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 112 (247)
.|.||||.|+..|+.+++++|++.. ...+..+..|.||||+|+..|+.+++++|++.|++++.++..|.||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~---------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 72 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQE---------NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESA 72 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHS---------SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcC---------CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcH
Confidence 5889999999999999999999872 2346667889999999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHH
Q psy599 113 LRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILK 192 (247)
Q Consensus 113 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~ 192 (247)
||+|+..++.+++++|++++++++..+..|.||||+|+..++.+++++|+++|++++.++..|.|||++|+..|+.++++
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (167)
T 3v31_A 73 LSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQ 152 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCC
Q psy599 193 LLLSHGARMD 202 (247)
Q Consensus 193 ~Ll~~g~~~~ 202 (247)
+|++++.+..
T Consensus 153 ~L~~~~~~~~ 162 (167)
T 3v31_A 153 VIESHLLKLL 162 (167)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999976653
No 55
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=9e-34 Score=219.25 Aligned_cols=172 Identities=20% Similarity=0.172 Sum_probs=161.1
Q ss_pred ccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHH
Q psy599 69 FDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMI 148 (247)
Q Consensus 69 ~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~ 148 (247)
.+..|..|.||||+|+..|+.+++++|++.|++++.+ +|.||||+|+..|+.+++++|+++|++++..+..|.||||+
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 101 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYY 101 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHH
Confidence 3567789999999999999999999999999998887 48999999999999999999999999999999999999999
Q ss_pred HHHcChHHHHHHHHhcCCCccccCCCC-CcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q psy599 149 ACYKGHYRIVKYLLSLNADMNRKSSKG-NTALHDCAEAGSIEILKLLLSHGARMDVDSYGMTPLLAAAVVGHQHIVEYLI 227 (247)
Q Consensus 149 a~~~~~~~~~~~Ll~~~~~~~~~~~~~-~t~l~~a~~~~~~~~i~~Ll~~g~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 227 (247)
|+..|+.+++++|+++|++++.++..| .||||+|+..|+.+++++|+++|++......|.||||+|+..|+.+++++|+
T Consensus 102 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 181 (285)
T 3kea_A 102 AVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLL 181 (285)
T ss_dssp HHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHH
Confidence 999999999999999999999999999 7999999999999999999999988753448999999999999999999999
Q ss_pred hcChhhhhhccchhh
Q psy599 228 GLNIVSRKEKIDALE 242 (247)
Q Consensus 228 ~~g~~~~~~~~~~~~ 242 (247)
++|++.+.+...+-+
T Consensus 182 ~~gad~n~~~~~g~t 196 (285)
T 3kea_A 182 DYMTSTNTNNSLLFI 196 (285)
T ss_dssp HHHHHTCTTCCCBCC
T ss_pred HcCCCCCcccCCCCC
Confidence 999999888776654
No 56
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=3.8e-33 Score=209.45 Aligned_cols=159 Identities=25% Similarity=0.331 Sum_probs=150.5
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHh-CCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCc-----ccCCCCCCCHHHH
Q psy599 75 EGAPPLWCAAAAGHLPIVQFLVEH-GAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADF-----EVSNRHGHTCLMI 148 (247)
Q Consensus 75 ~~~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~-----~~~~~~~~t~l~~ 148 (247)
.|.||||+|+..|+.+++++|++. |.+++.++..|.||||+|+..|+.+++++|++++.++ +..+..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 489999999999999999999998 9999999999999999999999999999999998876 5667789999999
Q ss_pred HHHcChHHHHHHHHhcCCCccccCC-------------CCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHH
Q psy599 149 ACYKGHYRIVKYLLSLNADMNRKSS-------------KGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAA 214 (247)
Q Consensus 149 a~~~~~~~~~~~Ll~~~~~~~~~~~-------------~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A 214 (247)
|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|+++|++++. +..|.||||+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999988765 799999999999999999999999999997 89999999999
Q ss_pred HHcCCHHHH----HHHHhcChhh
Q psy599 215 AVVGHQHIV----EYLIGLNIVS 233 (247)
Q Consensus 215 ~~~~~~~~~----~~Ll~~g~~~ 233 (247)
+..++.+++ ++|++.|++.
T Consensus 162 ~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 162 ILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp HTCSCHHHHHHHHHHHHHTTCSC
T ss_pred HHcCChHHHHHHHHHHHhcCCch
Confidence 999999988 9999999976
No 57
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=7.8e-33 Score=197.93 Aligned_cols=159 Identities=33% Similarity=0.487 Sum_probs=148.3
Q ss_pred cCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCC
Q psy599 31 KFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNS 110 (247)
Q Consensus 31 ~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 110 (247)
...+.++|+.|+..|+.+++++|++. +...+..+..|.||||+|+..|+.+++++|++.|++++.++..|.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~---------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 81 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMAN---------GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGM 81 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHT---------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHC---------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Confidence 45577999999999999999999987 223455677899999999999999999999999999999999999
Q ss_pred hhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHH
Q psy599 111 TPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEI 190 (247)
Q Consensus 111 ~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 190 (247)
||||+|+..++.+++++|++++++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+..|+.++
T Consensus 82 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~ 161 (169)
T 2y1l_E 82 TPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDL 161 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcC
Q psy599 191 LKLLLSHG 198 (247)
Q Consensus 191 i~~Ll~~g 198 (247)
+++|+++|
T Consensus 162 ~~~L~~~G 169 (169)
T 2y1l_E 162 AEILQKLN 169 (169)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHcC
Confidence 99999886
No 58
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=3.3e-33 Score=198.40 Aligned_cols=159 Identities=25% Similarity=0.342 Sum_probs=146.6
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCCh
Q psy599 32 FGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNST 111 (247)
Q Consensus 32 ~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 111 (247)
....||||.|+..|+.+++++|++. +...+..+..|.||||+|+. |+.+++++|++.|++++.++..|.|
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~---------~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t 72 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQN---------NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFA 72 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTS---------CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhC---------CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCC
Confidence 3567999999999999999999975 23345667789999999999 9999999999999999999999999
Q ss_pred hHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCC-ccccCCCCCcHHHHHHHhCCHHH
Q psy599 112 PLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNAD-MNRKSSKGNTALHDCAEAGSIEI 190 (247)
Q Consensus 112 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~-~~~~~~~~~t~l~~a~~~~~~~~ 190 (247)
|||+|+..|+.+++++|++++++++..+..|.||||+|+..++.+++++|+++|.+ ++.++..|.||||+|+..|+.++
T Consensus 73 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~ 152 (162)
T 1ihb_A 73 VIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEV 152 (162)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999998 58999999999999999999999
Q ss_pred HHHHHHcCCC
Q psy599 191 LKLLLSHGAR 200 (247)
Q Consensus 191 i~~Ll~~g~~ 200 (247)
+++|+++|++
T Consensus 153 ~~~Ll~~GAd 162 (162)
T 1ihb_A 153 VSLMQANGAG 162 (162)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHHhCCC
Confidence 9999999985
No 59
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-32 Score=193.83 Aligned_cols=149 Identities=30% Similarity=0.382 Sum_probs=143.7
Q ss_pred CCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHH
Q psy599 77 APPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYR 156 (247)
Q Consensus 77 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~ 156 (247)
.++|+.|+..|+.+++++|++.|.+++ .+..|.||||+|+..|+.+++++|++++++++..+..|.||||.|+..++.+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 578999999999999999999999876 5788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHH
Q psy599 157 IVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYL 226 (247)
Q Consensus 157 ~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~L 226 (247)
++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++. +..|.||+++|+..|+.+++++|
T Consensus 82 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999999999999999987 88999999999999999999987
No 60
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=4.6e-33 Score=200.94 Aligned_cols=165 Identities=25% Similarity=0.348 Sum_probs=155.5
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHh-CCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcC
Q psy599 75 EGAPPLWCAAAAGHLPIVQFLVEH-GAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKG 153 (247)
Q Consensus 75 ~~~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 153 (247)
.+.++|+.|+..|+.+++++|++. +.+++.++..|.||||+|+..|+.+++++|++++++++..+..|.||||+|+..+
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 477899999999999999999998 6678999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChh
Q psy599 154 HYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIV 232 (247)
Q Consensus 154 ~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 232 (247)
+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++. +..|.||+++|+..++.+++++|++.|++
T Consensus 84 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~ 163 (179)
T 3f6q_A 84 HRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQN 163 (179)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999997 89999999999999999999999999999
Q ss_pred hhhhccc
Q psy599 233 SRKEKID 239 (247)
Q Consensus 233 ~~~~~~~ 239 (247)
.+....+
T Consensus 164 ~~~~~~~ 170 (179)
T 3f6q_A 164 LNRIPYK 170 (179)
T ss_dssp CSCBCCC
T ss_pred cccCCcc
Confidence 8765543
No 61
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=5.4e-34 Score=214.70 Aligned_cols=175 Identities=22% Similarity=0.268 Sum_probs=157.8
Q ss_pred ccCcCCCCHHHHHHHcCCHHHHHHHHHhCC----CCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHH
Q psy599 71 HETVEGAPPLWCAAAAGHLPIVQFLVEHGA----KVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCL 146 (247)
Q Consensus 71 ~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~----~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l 146 (247)
..|..|.||||+|+..|+.+++++|++.+. +++.++..|.||||+|+..|+.+++++|+++|++++..+..|.|||
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 82 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL 82 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 356789999999999999999999987764 6899999999999999999999999999999999999999999999
Q ss_pred HHHHHcChHHHHHHHHhcCCC------ccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CC-CCCCHHHHHHHcC
Q psy599 147 MIACYKGHYRIVKYLLSLNAD------MNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DS-YGMTPLLAAAVVG 218 (247)
Q Consensus 147 ~~a~~~~~~~~~~~Ll~~~~~------~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~-~g~t~l~~A~~~~ 218 (247)
|+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|+++|++++. +. .|.||||+|+..+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence 999999999999999999875 467788899999999999999999999999999987 55 8999999999999
Q ss_pred CHHHHHHHHhcChhhhhhccchhhhcc
Q psy599 219 HQHIVEYLIGLNIVSRKEKIDALELLG 245 (247)
Q Consensus 219 ~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 245 (247)
+.+++++|++.|++.+.+...+.+.++
T Consensus 163 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~ 189 (236)
T 1ikn_D 163 NPDLVSLLLKCGADVNRVTYQGYSPYQ 189 (236)
T ss_dssp CHHHHHHHHTTTCCSCCCCTTCCCGGG
T ss_pred CHHHHHHHHHcCCCCCcccCCCCCHHH
Confidence 999999999999999988877776665
No 62
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=3.3e-33 Score=199.07 Aligned_cols=159 Identities=33% Similarity=0.410 Sum_probs=147.7
Q ss_pred CcCCCCHHHHHHHcCCHHHHHHHHHh-CCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHH
Q psy599 73 TVEGAPPLWCAAAAGHLPIVQFLVEH-GAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACY 151 (247)
Q Consensus 73 ~~~~~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~ 151 (247)
+..+.++|+.|+..|+.++++.|++. +.+++..+..|.||||+|+..|+.+++++|++++++++..+..|.||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 45678999999999999999999984 56777888889999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy599 152 KGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLN 230 (247)
Q Consensus 152 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g 230 (247)
.++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++. +..|.||+++|+. ++.+++++|++.|
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~g 163 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA 163 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999999999987 8999999999877 9999999999998
Q ss_pred hh
Q psy599 231 IV 232 (247)
Q Consensus 231 ~~ 232 (247)
+.
T Consensus 164 Al 165 (165)
T 3twr_A 164 AL 165 (165)
T ss_dssp --
T ss_pred cC
Confidence 74
No 63
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=1.6e-32 Score=198.16 Aligned_cols=164 Identities=23% Similarity=0.353 Sum_probs=152.5
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCCh
Q psy599 32 FGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNST 111 (247)
Q Consensus 32 ~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 111 (247)
.++.++|+.|+..|+.+++++|++..+.+ .+..+..|.||||+|+..|+.+++++|++.|++++.++..|.|
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~--------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 74 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTEND--------LNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDT 74 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSC--------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCccc--------ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCC
Confidence 45789999999999999999999874443 3556778999999999999999999999999999999999999
Q ss_pred hHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHH
Q psy599 112 PLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEIL 191 (247)
Q Consensus 112 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i 191 (247)
|||+|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.|||++|+..++.+++
T Consensus 75 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~ 154 (179)
T 3f6q_A 75 PLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLR 154 (179)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCC
Q psy599 192 KLLLSHGARMDV 203 (247)
Q Consensus 192 ~~Ll~~g~~~~~ 203 (247)
++|+++|++++.
T Consensus 155 ~~L~~~g~~~~~ 166 (179)
T 3f6q_A 155 ERAEKMGQNLNR 166 (179)
T ss_dssp HHHHHTTCCCSC
T ss_pred HHHHHhhcCccc
Confidence 999999999874
No 64
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=6.4e-33 Score=197.58 Aligned_cols=160 Identities=33% Similarity=0.458 Sum_probs=147.0
Q ss_pred cCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCC
Q psy599 31 KFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNS 110 (247)
Q Consensus 31 ~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 110 (247)
+.+|.|+|+.|+..|+.+++++|++..+. .....+..|.||||+|+..|+.+++++|++.|++++.++..|.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~--------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 76 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSV--------NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGL 76 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTT--------TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCC--------CccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCC
Confidence 45688999999999999999999976332 2345566789999999999999999999999999999999999
Q ss_pred hhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHH
Q psy599 111 TPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEI 190 (247)
Q Consensus 111 ~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 190 (247)
||||+|+..++.+++++|++++++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+. ++.++
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i 155 (165)
T 3twr_A 77 VPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDI 155 (165)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHH
T ss_pred CHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877 89999
Q ss_pred HHHHHHcCC
Q psy599 191 LKLLLSHGA 199 (247)
Q Consensus 191 i~~Ll~~g~ 199 (247)
+++|+++|+
T Consensus 156 ~~~L~~~gA 164 (165)
T 3twr_A 156 QDLLRGDAA 164 (165)
T ss_dssp HHHHHTC--
T ss_pred HHHHhhccc
Confidence 999999986
No 65
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=6.3e-32 Score=198.44 Aligned_cols=172 Identities=25% Similarity=0.374 Sum_probs=160.4
Q ss_pred cCCCCHHHHHHHcCCHHHHHHHHHhCC-CCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHc
Q psy599 74 VEGAPPLWCAAAAGHLPIVQFLVEHGA-KVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYK 152 (247)
Q Consensus 74 ~~~~t~l~~A~~~~~~~~~~~Ll~~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~ 152 (247)
..+.|+||.|+..|+.+.++.|+..+. +++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 358899999999999999999998876 9999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHH-hcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcC-CCCCC-CCCCCCHHHHHHHcCC-----HHHHH
Q psy599 153 GHYRIVKYLL-SLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHG-ARMDV-DSYGMTPLLAAAVVGH-----QHIVE 224 (247)
Q Consensus 153 ~~~~~~~~Ll-~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g-~~~~~-~~~g~t~l~~A~~~~~-----~~~~~ 224 (247)
++.+++++|+ ..+.+++..+..|.||||+|+..|+.+++++|+++| ++++. +..|.||||+|+..++ .++++
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~ 162 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVK 162 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHH
T ss_pred CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHH
Confidence 9999999999 556789999999999999999999999999999999 88886 8889999999999998 99999
Q ss_pred HHHhcChhhhhhccchhhhcc
Q psy599 225 YLIGLNIVSRKEKIDALELLG 245 (247)
Q Consensus 225 ~Ll~~g~~~~~~~~~~~~~~~ 245 (247)
+|++.|++...+..++.+.++
T Consensus 163 ~Ll~~ga~~~~~~~~g~t~l~ 183 (201)
T 3hra_A 163 LLMENGADQSIKDNSGRTAMD 183 (201)
T ss_dssp HHHHTTCCTTCCCTTSCCHHH
T ss_pred HHHHCCCCCCccCCCCCCHHH
Confidence 999999999888777665543
No 66
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=100.00 E-value=6.8e-32 Score=190.47 Aligned_cols=152 Identities=25% Similarity=0.331 Sum_probs=145.1
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHh-CCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCh
Q psy599 76 GAPPLWCAAAAGHLPIVQFLVEH-GAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGH 154 (247)
Q Consensus 76 ~~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 154 (247)
+.|+|+.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|+++|++++.++..|.||||.|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 45899999999999999999998 44899999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhc
Q psy599 155 YRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGL 229 (247)
Q Consensus 155 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~ 229 (247)
.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++ ++++. +..|.||+++|+..++.+++++|+++
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999 88886 88999999999999999999999974
No 67
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-31 Score=188.85 Aligned_cols=151 Identities=27% Similarity=0.418 Sum_probs=142.3
Q ss_pred CchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhH
Q psy599 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPL 113 (247)
Q Consensus 34 g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l 113 (247)
..|+|+.|+..|+.+++++|++.+. +. . .+..|.||||+|+..|+.+++++|++.|++++.++..|.|||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~-~~--------~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 71 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGA-PF--------T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPL 71 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTC-CC--------C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCC-CC--------C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 4689999999999999999999732 11 1 366899999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHH
Q psy599 114 RAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKL 193 (247)
Q Consensus 114 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~ 193 (247)
|+|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.|||++|+..|+.+++++
T Consensus 72 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~ 151 (153)
T 1awc_B 72 HMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEI 151 (153)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred H
Q psy599 194 L 194 (247)
Q Consensus 194 L 194 (247)
|
T Consensus 152 L 152 (153)
T 1awc_B 152 L 152 (153)
T ss_dssp H
T ss_pred h
Confidence 7
No 68
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=3.3e-32 Score=207.39 Aligned_cols=171 Identities=21% Similarity=0.234 Sum_probs=154.2
Q ss_pred CCCCHHHHHHHcCCHH----HHHHHHHhCCCCCc----cCCCCChhHHHHHhc---CChHHHHHHHHCCCCccc------
Q psy599 75 EGAPPLWCAAAAGHLP----IVQFLVEHGAKVNS----KTRTNSTPLRAACFD---GHFGVVKYLVEHGADFEV------ 137 (247)
Q Consensus 75 ~~~t~l~~A~~~~~~~----~~~~Ll~~~~~~~~----~~~~~~~~l~~a~~~---~~~~~~~~Ll~~~~~~~~------ 137 (247)
.|.|+||.|+..|+.+ ++++|++.|++++. ++..|.||||+|+.. |+.+++++|++.+++++.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 3789999999999997 66777789999998 899999999999999 999999999998776553
Q ss_pred -----CCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCC-------------CCcHHHHHHHhCCHHHHHHHHH---
Q psy599 138 -----SNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSK-------------GNTALHDCAEAGSIEILKLLLS--- 196 (247)
Q Consensus 138 -----~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-------------~~t~l~~a~~~~~~~~i~~Ll~--- 196 (247)
.+..|.||||+|+..|+.+++++|+++|++++.++.. |.||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 3367999999999999999999999999999998886 9999999999999999999999
Q ss_pred cCCCCCC-CCCCCCHHHHHHH--cCCHH-------HHHHHHhcChhh-------hhhccchhhhcc
Q psy599 197 HGARMDV-DSYGMTPLLAAAV--VGHQH-------IVEYLIGLNIVS-------RKEKIDALELLG 245 (247)
Q Consensus 197 ~g~~~~~-~~~g~t~l~~A~~--~~~~~-------~~~~Ll~~g~~~-------~~~~~~~~~~~~ 245 (247)
+|++++. +..|.||||+|+. .++.+ ++++|++.|++. ..+..++.+.++
T Consensus 161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 226 (256)
T 2etb_A 161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLK 226 (256)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHH
T ss_pred cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHH
Confidence 9999997 8899999999999 78888 999999999999 666666665554
No 69
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=100.00 E-value=2e-31 Score=188.08 Aligned_cols=154 Identities=26% Similarity=0.385 Sum_probs=144.3
Q ss_pred CchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhH
Q psy599 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPL 113 (247)
Q Consensus 34 g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l 113 (247)
|.|+|+.|+..|+.+++++|++..+.+ .+..+..|.||||+ +..|+.+++++|++.|++++.++..|.|||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~--------~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 72 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVH--------PDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPV 72 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCC--------TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcC--------ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 568999999999999999999873222 35566789999999 999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHH
Q psy599 114 RAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKL 193 (247)
Q Consensus 114 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~ 193 (247)
|+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++. ++++.++..|.||||+|+..|+.+++++
T Consensus 73 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~ 151 (156)
T 1bd8_A 73 HDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDI 151 (156)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHc
Q psy599 194 LLSH 197 (247)
Q Consensus 194 Ll~~ 197 (247)
|+++
T Consensus 152 Ll~~ 155 (156)
T 1bd8_A 152 LQGH 155 (156)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9975
No 70
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.98 E-value=3.7e-31 Score=203.63 Aligned_cols=165 Identities=28% Similarity=0.361 Sum_probs=154.0
Q ss_pred HHhhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHH-----HcCCHHHHHHHHHhCC
Q psy599 26 MVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAA-----AAGHLPIVQFLVEHGA 100 (247)
Q Consensus 26 ~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~-----~~~~~~~~~~Ll~~~~ 100 (247)
.++..|..|.||||+|+..|+.+++++|++.+.. ..+..+..|.||||+|+ ..++.+++++|++.|.
T Consensus 103 ~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~--------~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~ 174 (276)
T 4hbd_A 103 VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVC--------KVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGN 174 (276)
T ss_dssp HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCC--------CTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSC
T ss_pred cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC--------cCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCC
Confidence 3667789999999999999999999999997332 34666788999999999 6688999999999999
Q ss_pred CCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHh-cCCCccccCCCCCcHH
Q psy599 101 KVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLS-LNADMNRKSSKGNTAL 179 (247)
Q Consensus 101 ~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~t~l 179 (247)
..+..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||
T Consensus 175 ~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL 254 (276)
T 4hbd_A 175 INAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTAL 254 (276)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHH
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHcC
Q psy599 180 HDCAEAGSIEILKLLLSHG 198 (247)
Q Consensus 180 ~~a~~~~~~~~i~~Ll~~g 198 (247)
|+|+..|+.+++++|++++
T Consensus 255 ~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 255 MVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHhcc
Confidence 9999999999999999885
No 71
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.98 E-value=9.5e-32 Score=206.72 Aligned_cols=181 Identities=22% Similarity=0.303 Sum_probs=149.5
Q ss_pred ccCCCchHHHHHHhc---CcHHHHHHHHHhcccCcccc--ccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCc
Q psy599 30 FKFGGATPLIMACRN---GHKEIVEYLVKECKADVEET--GAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNS 104 (247)
Q Consensus 30 ~~~~g~t~L~~A~~~---g~~~~~~~ll~~~~~~~~~~--~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~ 104 (247)
.+..|.||||+|+.. |+.+++++|++.+....... ........+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 367899999999987 99999999999743211000 0111223456899999999999999999999999999999
Q ss_pred cCC--------------CCChhHHHHHhcCChHHHHHHHH---CCCCcccCCCCCCCHHHHHHHcCh---------HHHH
Q psy599 105 KTR--------------TNSTPLRAACFDGHFGVVKYLVE---HGADFEVSNRHGHTCLMIACYKGH---------YRIV 158 (247)
Q Consensus 105 ~~~--------------~~~~~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~ 158 (247)
++. .|.||||+|+..|+.+++++|++ +|++++.++..|.||||+|+..++ .+++
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v 209 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMY 209 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHH
Confidence 887 79999999999999999999999 999999999999999999999887 8999
Q ss_pred HHHHhcCCCcc-------ccCCCCCcHHHHHHHhCCHHHHHHHHHcCC-CCCC-CCCCCCH
Q psy599 159 KYLLSLNADMN-------RKSSKGNTALHDCAEAGSIEILKLLLSHGA-RMDV-DSYGMTP 210 (247)
Q Consensus 159 ~~Ll~~~~~~~-------~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~-~~~~-~~~g~t~ 210 (247)
++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|+ ++.. ...+.+|
T Consensus 210 ~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~ 270 (273)
T 2pnn_A 210 NEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHH 270 (273)
T ss_dssp HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC------------
T ss_pred HHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhc
Confidence 99999999886 489999999999999999999999999999 5554 3334443
No 72
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.98 E-value=2.7e-32 Score=208.25 Aligned_cols=172 Identities=22% Similarity=0.247 Sum_probs=151.3
Q ss_pred CCCchHHHHHH---hcCcHHHHHHHHHhcccCcccc--ccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccC
Q psy599 32 FGGATPLIMAC---RNGHKEIVEYLVKECKADVEET--GAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKT 106 (247)
Q Consensus 32 ~~g~t~L~~A~---~~g~~~~~~~ll~~~~~~~~~~--~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~ 106 (247)
..|.||||+|+ ..|+.+++++|++.+....... ........+..|.||||+|+..|+.+++++|++.|++++.++
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 123 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQA 123 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccc
Confidence 66999999999 7799999999999743221100 112334456689999999999999999999999999999998
Q ss_pred --------------CCCChhHHHHHhcCChHHHHHHHH---CCCCcccCCCCCCCHHHHHHHcCh---------HHHHHH
Q psy599 107 --------------RTNSTPLRAACFDGHFGVVKYLVE---HGADFEVSNRHGHTCLMIACYKGH---------YRIVKY 160 (247)
Q Consensus 107 --------------~~~~~~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~ 160 (247)
..|.||||+|+..|+.+++++|++ +|++++.++..|.||||+|+..++ .+++++
T Consensus 124 ~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~ 203 (260)
T 3jxi_A 124 RGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDL 203 (260)
T ss_dssp EECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHH
T ss_pred cccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHH
Confidence 589999999999999999999999 999999999999999999998777 799999
Q ss_pred HHhcCCCc-------cccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC
Q psy599 161 LLSLNADM-------NRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV 203 (247)
Q Consensus 161 Ll~~~~~~-------~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~ 203 (247)
|+++|+++ +.+|..|.||||+|+..|+.+++++|+++|++...
T Consensus 204 Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 204 LLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAA 253 (260)
T ss_dssp HHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred HHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCccc
Confidence 99999988 67999999999999999999999999999987653
No 73
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.98 E-value=1.3e-32 Score=216.69 Aligned_cols=196 Identities=18% Similarity=0.207 Sum_probs=155.9
Q ss_pred CchHHHHHHhcCcHHHHHHHHHhcccCccccccccccc-cCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChh
Q psy599 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDH-ETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTP 112 (247)
Q Consensus 34 g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~-~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 112 (247)
..+.+|.|+..+..+++++|++. +..++. .+..|.||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus 97 ~~~~~~~a~~~~~~~~~~~l~~~---------g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~Tp 167 (327)
T 1sw6_A 97 NQQQQHVSFDSLLQEVNDAFPNT---------QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESC 167 (327)
T ss_dssp -------CHHHHHHHHHHHCTTS---------CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCH
T ss_pred ccchhHHHHHhhHHHHHHHHHhc---------CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 34556888888888888888865 333455 67889999999999999999999999999999999999999
Q ss_pred HHHHHhcCC---hHHHHHHHHCC-CCcccCCCCCCCHHHHHHH----cChHHHHHHHHhc--------------------
Q psy599 113 LRAACFDGH---FGVVKYLVEHG-ADFEVSNRHGHTCLMIACY----KGHYRIVKYLLSL-------------------- 164 (247)
Q Consensus 113 l~~a~~~~~---~~~~~~Ll~~~-~~~~~~~~~~~t~l~~a~~----~~~~~~~~~Ll~~-------------------- 164 (247)
||+|+..|+ .++++.|++.+ .+++.++..|.||||+|+. .|+.+++++|++.
T Consensus 168 Lh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~ 247 (327)
T 1sw6_A 168 LVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEK 247 (327)
T ss_dssp HHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----
T ss_pred HHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcc
Confidence 999999988 67777777775 6788999999999999999 8999999999876
Q ss_pred CCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhhh
Q psy599 165 NADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALEL 243 (247)
Q Consensus 165 ~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~ 243 (247)
|++++.++..|.||||.|+. +++|++++ ++. +..|+||||+|+..|+.+++++|+++|++.+.+..++.+.
T Consensus 248 g~~~~~~~~~g~t~L~~a~~------~~~Ll~~~--~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~Tp 319 (327)
T 1sw6_A 248 ESKPNDKNGERKDSILENLD------LKWIIANM--LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRP 319 (327)
T ss_dssp ------------CHHHHHCS------HHHHHHHT--TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCG
T ss_pred cCCcccccccCCChhHHHHH------HHHHHHhC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCH
Confidence 88899999999999999985 89999984 444 8889999999999999999999999999999998888887
Q ss_pred ccC
Q psy599 244 LGA 246 (247)
Q Consensus 244 ~~~ 246 (247)
++-
T Consensus 320 L~~ 322 (327)
T 1sw6_A 320 VDF 322 (327)
T ss_dssp GGG
T ss_pred HHH
Confidence 764
No 74
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.98 E-value=2e-32 Score=215.60 Aligned_cols=165 Identities=21% Similarity=0.200 Sum_probs=138.5
Q ss_pred HHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCC---HHHHHHHHHhC-CCCCccCCCCChh
Q psy599 37 PLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGH---LPIVQFLVEHG-AKVNSKTRTNSTP 112 (247)
Q Consensus 37 ~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~---~~~~~~Ll~~~-~~~~~~~~~~~~~ 112 (247)
|||+|+..|+.+++++|+++ +..++..+..|.||||+|+..|+ .++++.|++.+ .+++.++..|.||
T Consensus 134 pLh~Aa~~g~~~~v~~Ll~~---------Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tp 204 (327)
T 1sw6_A 134 PLHWLTSIANLELVKHLVKH---------GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTI 204 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHT---------TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCH
T ss_pred HHHHHHHcCCHHHHHHHHHc---------CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCH
Confidence 89999999999999999987 34456788899999999999998 78888888876 6799999999999
Q ss_pred HHHHHh----cCChHHHHHHHHC--------------------CCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCc
Q psy599 113 LRAACF----DGHFGVVKYLVEH--------------------GADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADM 168 (247)
Q Consensus 113 l~~a~~----~~~~~~~~~Ll~~--------------------~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~ 168 (247)
||+|+. .|+.+++++|++. +++++.++..|.||||.|+. +++|+++ ++
T Consensus 205 Lh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~~ 276 (327)
T 1sw6_A 205 LHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--ML 276 (327)
T ss_dssp HHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--TT
T ss_pred HHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--CC
Confidence 999999 8999999999986 88999999999999999985 8889888 57
Q ss_pred cccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcC
Q psy599 169 NRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVG 218 (247)
Q Consensus 169 ~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~ 218 (247)
+.+|..|+||||+|+..|+.+++++|+++|++++. +..|+||||+|+..|
T Consensus 277 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 277 NAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 88899999999999999999999999999999997 899999999998754
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=9.4e-32 Score=202.82 Aligned_cols=165 Identities=22% Similarity=0.275 Sum_probs=122.9
Q ss_pred CcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHc
Q psy599 73 TVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYK 152 (247)
Q Consensus 73 ~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~ 152 (247)
+..|.||||.|+..++.+.++.|+++|.+++.. ..+.||||.|+..|+.+++++|++.+++++..+..|.||||+|+..
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 346999999999999999999999999999865 6789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCC-CHHHHH--HHcCCHHHHHHHHh
Q psy599 153 GHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGM-TPLLAA--AVVGHQHIVEYLIG 228 (247)
Q Consensus 153 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~-t~l~~A--~~~~~~~~~~~Ll~ 228 (247)
|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++. +..|. ||+++| +..|+.+++++|++
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~ 160 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 160 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999986 55555 999999 78899999999999
Q ss_pred cChhhhhhcc
Q psy599 229 LNIVSRKEKI 238 (247)
Q Consensus 229 ~g~~~~~~~~ 238 (247)
.|++......
T Consensus 161 ~~a~~~~~~~ 170 (239)
T 1ycs_B 161 VQEKMGIMNK 170 (239)
T ss_dssp HHHHTTTTGG
T ss_pred hhhccccccc
Confidence 9998876543
No 76
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.8e-34 Score=216.04 Aligned_cols=187 Identities=26% Similarity=0.255 Sum_probs=165.4
Q ss_pred hccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCC
Q psy599 29 KFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRT 108 (247)
Q Consensus 29 ~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~ 108 (247)
..+.+|.||||.|+..|+.+++++|++. +...+..+..|.||||+|+..|+.+++++|++.|++++.++..
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~---------g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~ 86 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKE---------MNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSH 86 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHH---------SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhc---------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence 4466788999999999999999999987 2234567788999999999999999999999999999999999
Q ss_pred CChhHHHHHhcCChHHHHHHHHCCCCcccCC-CCCCCHHHHH--HHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHh
Q psy599 109 NSTPLRAACFDGHFGVVKYLVEHGADFEVSN-RHGHTCLMIA--CYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEA 185 (247)
Q Consensus 109 ~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~t~l~~a--~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~ 185 (247)
|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+| +..++.+++++|++.|++++.++..+.||++.++..
T Consensus 87 g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~ 166 (229)
T 2vge_A 87 GWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAE 166 (229)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhc
Confidence 9999999999999999999999999999886 5999999999 999999999999999999999999999998865554
Q ss_pred CCHHHHHHHHHcCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHH
Q psy599 186 GSIEILKLLLSHGARMDV---DSYGMTPLLAAAVVGHQHIVEYLI 227 (247)
Q Consensus 186 ~~~~~i~~Ll~~g~~~~~---~~~g~t~l~~A~~~~~~~~~~~Ll 227 (247)
+ ..++|++.|++++. +..|.|||++|+..|+.++++..+
T Consensus 167 ~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 167 F---GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp S---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred c---ccccCccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 3 33678889998543 788999999999999999987644
No 77
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=6.3e-32 Score=203.75 Aligned_cols=178 Identities=19% Similarity=0.203 Sum_probs=135.1
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCCh
Q psy599 32 FGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNST 111 (247)
Q Consensus 32 ~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 111 (247)
..|.||||.|+..|+.+.++.|++++ .++ + .+..+.|+||.|+..|+.+++++|++.|++++.++..|.|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g-~~~--------~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t 72 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHG-MRV--------K-FNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGIT 72 (239)
T ss_dssp --------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCC
T ss_pred ccccccCchhhhhhhHHHHHHHhccC-CCc--------c-cCchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 56999999999999999999999872 222 1 1246899999999999999999999999999999999999
Q ss_pred hHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCC-cHHHHH--HHhCCH
Q psy599 112 PLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGN-TALHDC--AEAGSI 188 (247)
Q Consensus 112 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~-t~l~~a--~~~~~~ 188 (247)
|||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..+. ||||+| +..|+.
T Consensus 73 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~ 152 (239)
T 1ycs_B 73 ALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYT 152 (239)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccH
Confidence 99999999999999999999999999999999999999999999999999999999999988877 999999 788999
Q ss_pred HHHHHHHHcCCCCCC----------CCCCCCHHHHHHHcCC
Q psy599 189 EILKLLLSHGARMDV----------DSYGMTPLLAAAVVGH 219 (247)
Q Consensus 189 ~~i~~Ll~~g~~~~~----------~~~g~t~l~~A~~~~~ 219 (247)
+++++|+++|++++. +..+.++.+++...|.
T Consensus 153 ~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 153 QCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp CHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 999999999988764 4457888888887775
No 78
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=2.7e-30 Score=178.15 Aligned_cols=130 Identities=28% Similarity=0.407 Sum_probs=74.2
Q ss_pred CCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCC-CCcHH
Q psy599 101 KVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSK-GNTAL 179 (247)
Q Consensus 101 ~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~~t~l 179 (247)
+++.++..|.||||+|+..|+.+++++|++++++++.++..|.||||+|+. ++.+++++|+++|++++.++.. |.|||
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPV 82 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHH
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHH
Confidence 444555555555555555555555555555555555555555555555555 5555555555555555555555 55555
Q ss_pred HHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcCh
Q psy599 180 HDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNI 231 (247)
Q Consensus 180 ~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~ 231 (247)
|+|+..|+.+++++|+++|++++. +..|.|||++|+..++.+++++|+++|+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 555555555555555555555554 5555555555555555555555555554
No 79
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=1.1e-29 Score=174.94 Aligned_cols=132 Identities=21% Similarity=0.218 Sum_probs=127.0
Q ss_pred cccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCC-CCCHH
Q psy599 68 MFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRH-GHTCL 146 (247)
Q Consensus 68 ~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~~t~l 146 (247)
.++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+. ++.+++++|++++++++..+.. |.|||
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPV 82 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHH
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHH
Confidence 346677889999999999999999999999999999999999999999999 9999999999999999999999 99999
Q ss_pred HHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCC
Q psy599 147 MIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGAR 200 (247)
Q Consensus 147 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~ 200 (247)
|+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999999875
No 80
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=1.5e-29 Score=178.49 Aligned_cols=143 Identities=20% Similarity=0.199 Sum_probs=117.3
Q ss_pred ccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCC-HHHHH
Q psy599 71 HETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHT-CLMIA 149 (247)
Q Consensus 71 ~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t-~l~~a 149 (247)
..+..|.|+||+|+..|+.+++++|++.|++++.++..|.||||+|+ .|+.+++++|+++|++++.++..|.| |||+|
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA 85 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 34567899999999999999999999999999999999999999985 89999999999999999999999998 99999
Q ss_pred HHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHH
Q psy599 150 CYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAA 214 (247)
Q Consensus 150 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A 214 (247)
+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++. +..|.||.+-+
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 999999999999999999999999999999999999999999999999999987 77888887643
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=1.6e-29 Score=183.02 Aligned_cols=156 Identities=19% Similarity=0.189 Sum_probs=140.4
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCCCccC-CCCChhHHHHHhcCCh----HHHHHHHHCCCCcccCCCCCCCHHHHHH
Q psy599 76 GAPPLWCAAAAGHLPIVQFLVEHGAKVNSKT-RTNSTPLRAACFDGHF----GVVKYLVEHGADFEVSNRHGHTCLMIAC 150 (247)
Q Consensus 76 ~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~l~~a~~~~~~----~~~~~Ll~~~~~~~~~~~~~~t~l~~a~ 150 (247)
+.++|+.|++.|+.+.++.++..+. +..+ ..|.||||+|+..++. +++++|+++|++++.++..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 5678999999999999999998875 4444 6799999999999975 5999999999999999999999999999
Q ss_pred HcCh------HHHHHHHHhcCCCccccCCCCC-cHHHHHHHhC-----CHHHHHHHHH-cCCCCCC-CCCCCCHHHHHHH
Q psy599 151 YKGH------YRIVKYLLSLNADMNRKSSKGN-TALHDCAEAG-----SIEILKLLLS-HGARMDV-DSYGMTPLLAAAV 216 (247)
Q Consensus 151 ~~~~------~~~~~~Ll~~~~~~~~~~~~~~-t~l~~a~~~~-----~~~~i~~Ll~-~g~~~~~-~~~g~t~l~~A~~ 216 (247)
..++ .+++++|+++|++++.+|..|. ||||+|+..+ ..+++++|++ +|++++. +..|.||||+|+.
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~ 163 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR 163 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHT
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHH
Confidence 9886 6889999999999999999999 9999999944 4579999999 9999997 9999999999999
Q ss_pred cCCHHHHHHHHhcChhh
Q psy599 217 VGHQHIVEYLIGLNIVS 233 (247)
Q Consensus 217 ~~~~~~~~~Ll~~g~~~ 233 (247)
.++.+++++|+++.-..
T Consensus 164 ~~~~~~v~~L~~~~~~~ 180 (186)
T 3t8k_A 164 CQKPIALKMMEDYIKKY 180 (186)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHH
Confidence 99999999999875433
No 82
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=4.1e-31 Score=197.80 Aligned_cols=173 Identities=20% Similarity=0.167 Sum_probs=149.6
Q ss_pred cccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHH
Q psy599 70 DHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIA 149 (247)
Q Consensus 70 ~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a 149 (247)
...+..+.|+||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A 94 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCA 94 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 34456778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcChHHHHHHHHhcCCCccccC-CCCCcHHHHH--HHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHH
Q psy599 150 CYKGHYRIVKYLLSLNADMNRKS-SKGNTALHDC--AEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEY 225 (247)
Q Consensus 150 ~~~~~~~~~~~Ll~~~~~~~~~~-~~~~t~l~~a--~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~ 225 (247)
+..|+.+++++|++.|++++..+ ..|.||||+| +..|+.+++++|+++|++++. +..|.||++.++.... .++
T Consensus 95 ~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~---~~~ 171 (229)
T 2vge_A 95 ASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG---DEL 171 (229)
T ss_dssp HHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSST---TBC
T ss_pred HHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccc---ccc
Confidence 99999999999999999999886 6899999999 999999999999999999887 6777888876554443 357
Q ss_pred HHhcChh--hhhhccchhhhcc
Q psy599 226 LIGLNIV--SRKEKIDALELLG 245 (247)
Q Consensus 226 Ll~~g~~--~~~~~~~~~~~~~ 245 (247)
|++.|++ ...++.++.+.++
T Consensus 172 ll~~ga~~~~~~~d~~G~TpL~ 193 (229)
T 2vge_A 172 SFREGESVTVLRRDGPEETDWW 193 (229)
T ss_dssp CBCTTCEEEEEESSCTTCSSEE
T ss_pred CccccccccccccCCCcccHHH
Confidence 7888887 4455555555543
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=6.7e-28 Score=163.65 Aligned_cols=124 Identities=46% Similarity=0.720 Sum_probs=75.8
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChH
Q psy599 76 GAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHY 155 (247)
Q Consensus 76 ~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~ 155 (247)
|.||||+|+..|+.+++++|++.|++++.++..|.+|||+|+..++.+++++|++++.+++..+..|.||+|.|+..++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence 55666666666666666666666666666666666666666666666666666666666555555566666666666666
Q ss_pred HHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCC
Q psy599 156 RIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGA 199 (247)
Q Consensus 156 ~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~ 199 (247)
+++++|+++|++++.++..|.|||++|+..|+.+++++|+++|+
T Consensus 82 ~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 82 EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 66666665555555555555556665555555555555555554
No 84
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=5.2e-28 Score=164.21 Aligned_cols=125 Identities=42% Similarity=0.630 Sum_probs=121.0
Q ss_pred CCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Q psy599 108 TNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGS 187 (247)
Q Consensus 108 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 187 (247)
+|.||||+|+..|+.+++++|++++.+++..+..|.||||.|+..++.+++++|++.|++++.++..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChh
Q psy599 188 IEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIV 232 (247)
Q Consensus 188 ~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 232 (247)
.+++++|+++|++++. +..|.||+++|+..++.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999987 88999999999999999999999999975
No 85
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=9.3e-29 Score=174.37 Aligned_cols=140 Identities=27% Similarity=0.378 Sum_probs=119.6
Q ss_pred CccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCc-HHHH
Q psy599 103 NSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNT-ALHD 181 (247)
Q Consensus 103 ~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t-~l~~ 181 (247)
+..+..|.+|||+|+..|+.+++++|++++++++..+..|.||||+|+ .++.+++++|+++|++++.++..|.| |||+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 445678899999999999999999999999999999999999999985 99999999999999999999999999 9999
Q ss_pred HHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhccchhhh
Q psy599 182 CAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDALEL 243 (247)
Q Consensus 182 a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~ 243 (247)
|+..|+.+++++|+++|++++. +..|.||||+|+..++.+++++|+++|++...+...+.+.
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 147 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDA 147 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------------
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcc
Confidence 9999999999999999999997 8899999999999999999999999999998887766544
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=4.3e-28 Score=167.03 Aligned_cols=122 Identities=34% Similarity=0.449 Sum_probs=66.7
Q ss_pred CChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCH
Q psy599 109 NSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSI 188 (247)
Q Consensus 109 ~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~ 188 (247)
+.+|+|+|+..|+.+++++|++++++++..+..|.||||.|+..++.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~ 93 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHL 93 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCH
Confidence 44555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy599 189 EILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLN 230 (247)
Q Consensus 189 ~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g 230 (247)
+++++|+++|++++. +..|.|||++|+..++.+++++|++.|
T Consensus 94 ~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 94 EIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 555555555555554 455555555555555555555555544
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=5.7e-29 Score=180.07 Aligned_cols=158 Identities=18% Similarity=0.139 Sum_probs=140.2
Q ss_pred CchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccC-cCCCCHHHHHHHcCCH----HHHHHHHHhCCCCCccCCC
Q psy599 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHET-VEGAPPLWCAAAAGHL----PIVQFLVEHGAKVNSKTRT 108 (247)
Q Consensus 34 g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~-~~~~t~l~~A~~~~~~----~~~~~Ll~~~~~~~~~~~~ 108 (247)
++++|+.|+..|+.+.++.++.... +..+ ..|.||||+|+..++. +++++|+++|++++.++..
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~-----------~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~ 74 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY-----------EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKE 74 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS-----------SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTT
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc-----------ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCC
Confidence 4688999999999999999987521 1222 5799999999999975 5999999999999999999
Q ss_pred CChhHHHHHhcCC------hHHHHHHHHCCCCcccCCCCCC-CHHHHHHHc-----ChHHHHHHHHh-cCCCccccCCCC
Q psy599 109 NSTPLRAACFDGH------FGVVKYLVEHGADFEVSNRHGH-TCLMIACYK-----GHYRIVKYLLS-LNADMNRKSSKG 175 (247)
Q Consensus 109 ~~~~l~~a~~~~~------~~~~~~Ll~~~~~~~~~~~~~~-t~l~~a~~~-----~~~~~~~~Ll~-~~~~~~~~~~~~ 175 (247)
|.||||+|+..++ .+++++|+++|++++.+|..|. ||||+|+.. +..+++++|++ +|++++.+|..|
T Consensus 75 g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G 154 (186)
T 3t8k_A 75 GTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWG 154 (186)
T ss_dssp CCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTS
T ss_pred CCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCC
Confidence 9999999999887 5789999999999999999999 999999984 45679999999 999999999999
Q ss_pred CcHHHHHHHhCCHHHHHHHHHcCCCCC
Q psy599 176 NTALHDCAEAGSIEILKLLLSHGARMD 202 (247)
Q Consensus 176 ~t~l~~a~~~~~~~~i~~Ll~~g~~~~ 202 (247)
.||||+|+..|+.+++++|.++..+.+
T Consensus 155 ~TpL~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 155 LTALEFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp CCHHHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999998754443
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=5.5e-28 Score=166.51 Aligned_cols=126 Identities=32% Similarity=0.428 Sum_probs=121.1
Q ss_pred CcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHc
Q psy599 73 TVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYK 152 (247)
Q Consensus 73 ~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~ 152 (247)
...+.|+||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++++++++..+..|.||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 44688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcC
Q psy599 153 GHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHG 198 (247)
Q Consensus 153 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g 198 (247)
++.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999986
No 89
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=8e-31 Score=208.92 Aligned_cols=201 Identities=18% Similarity=0.146 Sum_probs=161.2
Q ss_pred HHHHHHHhhccCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCC
Q psy599 21 HEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGA 100 (247)
Q Consensus 21 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~ 100 (247)
.+..+.+...+.++.||||.|+..|+.+++++|++.+.... .....+..+.||||+|+..|+.+++++|+++|+
T Consensus 79 ~~~~~~l~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~------~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~ga 152 (376)
T 2aja_A 79 KQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDE------IVKVIQAENYQAFRLAAENGHLHVLNRLCELAP 152 (376)
T ss_dssp TTHHHHHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCS------SCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCT
T ss_pred HHHHHHHHHcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHH------HHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 34455666677788899999999999999999998733110 111233457789999999999999999999997
Q ss_pred CC---CccCCCCChhHHHHHhcCChHHHHHHHHCCCCccc--CCCCCCCHHHHHH-HcChHHHHHHHHhcCCCccccCCC
Q psy599 101 KV---NSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEV--SNRHGHTCLMIAC-YKGHYRIVKYLLSLNADMNRKSSK 174 (247)
Q Consensus 101 ~~---~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~--~~~~~~t~l~~a~-~~~~~~~~~~Ll~~~~~~~~~~~~ 174 (247)
++ +..+.. .||||+|+..|+.+++++|+++|++++. .+..|.||||+|+ ..|+.+++++|++.|. .
T Consensus 153 d~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~ 224 (376)
T 2aja_A 153 TEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------M 224 (376)
T ss_dssp TTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------H
T ss_pred CccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------c
Confidence 52 333333 8999999999999999999999999876 7888999999999 9999999999998763 2
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHcCCCCC----------------------------------------------------
Q psy599 175 GNTALHDCAEAGSIEILKLLLSHGARMD---------------------------------------------------- 202 (247)
Q Consensus 175 ~~t~l~~a~~~~~~~~i~~Ll~~g~~~~---------------------------------------------------- 202 (247)
+.|||+.|+..|+.+++++|+++|++++
T Consensus 225 ~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~ 304 (376)
T 2aja_A 225 LAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIP 304 (376)
T ss_dssp HHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTST
T ss_pred cchHHHHHHHCCCHHHHHHHHhcCcccccccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhCh
Confidence 7899999999999999999998765421
Q ss_pred ---------C-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhh
Q psy599 203 ---------V-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRK 235 (247)
Q Consensus 203 ---------~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 235 (247)
. ...+.||+++|+..|+.+++++|++.|.....
T Consensus 305 ~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~~v~~~ 347 (376)
T 2aja_A 305 GIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLAL 347 (376)
T ss_dssp TTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSHHHHHS
T ss_pred hhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcChHHHHH
Confidence 0 12345789999999999999999998765543
No 90
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.95 E-value=4.6e-28 Score=167.08 Aligned_cols=127 Identities=29% Similarity=0.456 Sum_probs=76.6
Q ss_pred ccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy599 104 SKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCA 183 (247)
Q Consensus 104 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~ 183 (247)
.++..|.||||+|+..|+.+++++|++++++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 44555666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy599 184 EAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLN 230 (247)
Q Consensus 184 ~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g 230 (247)
..|+.+++++|+++|++++. +..|.||+++|+..+..+++++|.+.+
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 66666666666666666654 556666666666666666655555443
No 91
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=1.7e-29 Score=201.32 Aligned_cols=180 Identities=15% Similarity=0.117 Sum_probs=150.7
Q ss_pred chHHHHHHh-cCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCC---CccCCCCC
Q psy599 35 ATPLIMACR-NGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKV---NSKTRTNS 110 (247)
Q Consensus 35 ~t~L~~A~~-~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~---~~~~~~~~ 110 (247)
.++++.|.. .++.++++++++. +..+.||||+|+..|+.+++++|++.|... +..+..|.
T Consensus 66 ll~~~~a~~~~~~~~~~~~l~~~----------------g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~ 129 (376)
T 2aja_A 66 LLCLYYAHYNRNAKQLWSDAHKK----------------GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENY 129 (376)
T ss_dssp HHHHHHHHTTTTCTTHHHHHHHH----------------TCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHc----------------CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCC
Confidence 356777776 5778888888875 123569999999999999999999998732 23345678
Q ss_pred hhHHHHHhcCChHHHHHHHHCCCCc---ccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccc--cCCCCCcHHHHHH-H
Q psy599 111 TPLRAACFDGHFGVVKYLVEHGADF---EVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNR--KSSKGNTALHDCA-E 184 (247)
Q Consensus 111 ~~l~~a~~~~~~~~~~~Ll~~~~~~---~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~--~~~~~~t~l~~a~-~ 184 (247)
+|||+|+..|+.+++++|+++|+++ +..+.. .||||.|+..|+.+++++|+++|++++. .+..|.||||+|+ .
T Consensus 130 tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~ 208 (376)
T 2aja_A 130 QAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVG 208 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHST
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHH
Confidence 9999999999999999999999752 333333 8999999999999999999999999877 8888999999999 9
Q ss_pred hCCHHHHHHHHHcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhhc
Q psy599 185 AGSIEILKLLLSHGARMDVDSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKEK 237 (247)
Q Consensus 185 ~~~~~~i~~Ll~~g~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 237 (247)
.|+.+++++|+++|+. |.||+++|+..|+.+++++|++.|++...++
T Consensus 209 ~G~~eiv~~Ll~~ga~------~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~ 255 (376)
T 2aja_A 209 RGHHNVINFLLDCPVM------LAYAEIHEFEYGEKYVNPFIARHVNRLKEMH 255 (376)
T ss_dssp TCCHHHHHHHTTSHHH------HHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhCCCc------cchHHHHHHHCCCHHHHHHHHhcCccccccc
Confidence 9999999999998743 7899999999999999999999999876553
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=4.8e-27 Score=169.94 Aligned_cols=140 Identities=26% Similarity=0.302 Sum_probs=130.8
Q ss_pred CcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCC-CCCCCHHHHHHH
Q psy599 73 TVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSN-RHGHTCLMIACY 151 (247)
Q Consensus 73 ~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~t~l~~a~~ 151 (247)
+..|.||||+|+..|+.++++.|++ |.+++.++..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 3478899999999999999999999 99999999999999999999999999999999999999888 889999999999
Q ss_pred cChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Q psy599 152 KGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDVDSYGMTPLLAAAVVGHQHIVEYLIGL 229 (247)
Q Consensus 152 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 229 (247)
.|+.+++++|+++|++++.+|..|.||||+|+..++ ...+.+|+++|+..|..+++++|.++
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~----------------~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREILK----------------TTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHH----------------TCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhcc----------------CcccccHHHHHHHcCHHHHHHHHHHh
Confidence 999999999999999999999999999999987432 24578999999999999999999875
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=7.9e-27 Score=176.32 Aligned_cols=142 Identities=25% Similarity=0.290 Sum_probs=132.2
Q ss_pred cCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCC-CCCCCHHHHHHHc
Q psy599 74 VEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSN-RHGHTCLMIACYK 152 (247)
Q Consensus 74 ~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~t~l~~a~~~ 152 (247)
..|.||||+|+..|+.++++.|++ |.+++.++..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 468899999999999999999999 99999999999999999999999999999999999999888 7899999999999
Q ss_pred ChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcChh
Q psy599 153 GHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDVDSYGMTPLLAAAVVGHQHIVEYLIGLNIV 232 (247)
Q Consensus 153 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 232 (247)
|+.+++++|+++|++++.+|..|.||||+|+..+. ...+.|||++|+..|+.+++++|++.+..
T Consensus 122 g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~----------------~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEVEDERGLTALELAREILK----------------TTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT----------------TCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh----------------ccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 99999999999999999999999999999986322 35689999999999999999999987544
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=8.5e-27 Score=160.72 Aligned_cols=129 Identities=29% Similarity=0.392 Sum_probs=119.8
Q ss_pred ccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHH
Q psy599 71 HETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIAC 150 (247)
Q Consensus 71 ~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~ 150 (247)
..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++++++++..+..|.||||+|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCC
Q psy599 151 YKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGA 199 (247)
Q Consensus 151 ~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~ 199 (247)
..++.+++++|+++|++++.+|..|.||+++|+..+..+++++|.+.+.
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999999999999999999999999999888877654
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.94 E-value=2.6e-26 Score=178.34 Aligned_cols=138 Identities=20% Similarity=0.184 Sum_probs=97.4
Q ss_pred CCHHHHHHHcCCHHHHHHHHHhCCCCCc------cCCCCChhHHHHHhc---CChHHHHHHHHCCCCcccCCCCCCCHHH
Q psy599 77 APPLWCAAAAGHLPIVQFLVEHGAKVNS------KTRTNSTPLRAACFD---GHFGVVKYLVEHGADFEVSNRHGHTCLM 147 (247)
Q Consensus 77 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~------~~~~~~~~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~t~l~ 147 (247)
.++|+.|+..|+.+.++.|++.|++++. .+..|.||||+|+.. ++.+++++|+++|++++..+..|.||||
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh 231 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 231 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHH
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHH
Confidence 3557777777777777777777777766 466777777777775 6777777777777777777777777777
Q ss_pred HHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCHHHHHHHcCC
Q psy599 148 IACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDVDSYGMTPLLAAAVVGH 219 (247)
Q Consensus 148 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~~~~g~t~l~~A~~~~~ 219 (247)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ .|.||||+|+..|+
T Consensus 232 ~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-----~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 232 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-----TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-----TTSSCCC-------
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-----CCCChhHHHHhcCC
Confidence 77777777777777777777777777777777777777777777777777654 46677777776664
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=1.2e-25 Score=152.06 Aligned_cols=107 Identities=29% Similarity=0.340 Sum_probs=61.4
Q ss_pred CCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Q psy599 108 TNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGS 187 (247)
Q Consensus 108 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 187 (247)
.|.+|||+|+..|+.+++++|++.+.+++..+..|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~ 85 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGH 85 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 34455555555555555555555555555555555555555555555555555555555555555555566666666556
Q ss_pred HHHHHHHHHcCCCCCC-CCCCCCHHHHH
Q psy599 188 IEILKLLLSHGARMDV-DSYGMTPLLAA 214 (247)
Q Consensus 188 ~~~i~~Ll~~g~~~~~-~~~g~t~l~~A 214 (247)
.+++++|+++|++++. +..|.||+++|
T Consensus 86 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 86 VSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 6666666655555554 55555666555
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=5.1e-26 Score=169.52 Aligned_cols=126 Identities=27% Similarity=0.404 Sum_probs=57.2
Q ss_pred CChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhc-CCCccccCCCCCcHHHHHHHhCC
Q psy599 109 NSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSL-NADMNRKSSKGNTALHDCAEAGS 187 (247)
Q Consensus 109 ~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~ 187 (247)
|.||||+|+..|+.+++++|++.+++++.++..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~ 152 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGY 152 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTC
T ss_pred cccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCC
Confidence 44444444444444444444444444444444444444444444444444444444 44444444445555555555555
Q ss_pred HHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhh
Q psy599 188 IEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSR 234 (247)
Q Consensus 188 ~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 234 (247)
.+++++|+++|++++. +..|.|||++|+..+..++++.|++.|++..
T Consensus 153 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 153 ADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp HHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred HHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 5555555555554443 4444555555555555555555554444443
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=1.4e-25 Score=151.75 Aligned_cols=114 Identities=30% Similarity=0.383 Sum_probs=107.1
Q ss_pred CcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHc
Q psy599 73 TVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYK 152 (247)
Q Consensus 73 ~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~ 152 (247)
+..|.|+||+|+..|+.+++++|++.|.+++.++..|.||||+|+..++.+++++|++++++++.++..|.||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Q psy599 153 GHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAG 186 (247)
Q Consensus 153 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 186 (247)
++.+++++|+++|++++.++..|.||+|+|...+
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence 9999999999999999999999999999995443
No 99
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=2.1e-25 Score=161.32 Aligned_cols=140 Identities=26% Similarity=0.272 Sum_probs=126.0
Q ss_pred cCCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccC-CCC
Q psy599 31 KFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKT-RTN 109 (247)
Q Consensus 31 ~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~ 109 (247)
+..|.||||.|+..|+.+++++|++ +.+ .+..+..|.||||+|+..|+.+++++|++.|++++.++ ..|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~--------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g 110 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE--DRD--------VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGG 110 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT--TSC--------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh--cCC--------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCC
Confidence 3468899999999999999999997 222 35567789999999999999999999999999999988 889
Q ss_pred ChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHH
Q psy599 110 STPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIE 189 (247)
Q Consensus 110 ~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~ 189 (247)
.||||+|+..|+.+++++|+++|++++.++..|.||+|+|+..++. ..+.+||++|+..|..+
T Consensus 111 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~ 173 (183)
T 3deo_A 111 LTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEK 173 (183)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHH
T ss_pred CCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHH
Confidence 9999999999999999999999999999999999999999875433 34679999999999999
Q ss_pred HHHHHHHc
Q psy599 190 ILKLLLSH 197 (247)
Q Consensus 190 ~i~~Ll~~ 197 (247)
++++|.++
T Consensus 174 i~~~L~~~ 181 (183)
T 3deo_A 174 VINVLEGQ 181 (183)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHh
Confidence 99999876
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=8.6e-26 Score=168.27 Aligned_cols=132 Identities=26% Similarity=0.330 Sum_probs=117.5
Q ss_pred cCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHC-CCCcccCCCCCCCHHHHHH
Q psy599 72 ETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEH-GADFEVSNRHGHTCLMIAC 150 (247)
Q Consensus 72 ~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~a~ 150 (247)
.+..|.|+||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++ +++++..+..|.||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 455789999999999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred HcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC
Q psy599 151 YKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV 203 (247)
Q Consensus 151 ~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~ 203 (247)
..|+.+++++|+++|++++.++..|.|||++|+..+..++++.|++.|+....
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~ 201 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTL 201 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhc
Confidence 99999999999999999999999999999999999999999999999988764
No 101
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=1.6e-25 Score=169.16 Aligned_cols=142 Identities=25% Similarity=0.268 Sum_probs=126.8
Q ss_pred CCCchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHcCCHHHHHHHHHhCCCCCccC-CCCC
Q psy599 32 FGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKT-RTNS 110 (247)
Q Consensus 32 ~~g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~ 110 (247)
..|.||||.|+..|+.+++++|++ +.+ .+..+..|.||||+|+..|+.+++++|+++|++++.++ ..|.
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~--~~~--------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~ 112 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE--DRD--------VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGL 112 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT--TCC--------TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc--CCC--------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCC
Confidence 458899999999999999999997 223 35567789999999999999999999999999999988 8899
Q ss_pred hhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHH
Q psy599 111 TPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEI 190 (247)
Q Consensus 111 ~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 190 (247)
||||+|+..|+.+++++|+++|++++.++..|.||+|+|+..++ ...+.|||++|+..|+.++
T Consensus 113 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~i 175 (244)
T 3ui2_A 113 TALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKV 175 (244)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHH
Confidence 99999999999999999999999999999999999999985221 2457899999999999999
Q ss_pred HHHHHHcCCC
Q psy599 191 LKLLLSHGAR 200 (247)
Q Consensus 191 i~~Ll~~g~~ 200 (247)
+++|++++.+
T Consensus 176 v~~L~~~~~~ 185 (244)
T 3ui2_A 176 INVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHEE
T ss_pred HHHHHHhccc
Confidence 9999987443
No 102
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=1.3e-24 Score=168.80 Aligned_cols=146 Identities=21% Similarity=0.127 Sum_probs=121.1
Q ss_pred CchHHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHc---CCHHHHHHHHHhCCCCCccCCCCC
Q psy599 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAA---GHLPIVQFLVEHGAKVNSKTRTNS 110 (247)
Q Consensus 34 g~t~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~---~~~~~~~~Ll~~~~~~~~~~~~~~ 110 (247)
+.++|+.|+..|+.+.++.|++.. .+++... .....+..|.||||+|+.. ++.+++++|++.|++++.++..|.
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g-~d~~~~~--~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~ 227 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANG-QDFGQPL--PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGN 227 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTT-CCTTSCE--ECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcC-CcccccC--CCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCC
Confidence 457799999999999999999763 2222110 0011467899999999997 899999999999999999999999
Q ss_pred hhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCH
Q psy599 111 TPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSI 188 (247)
Q Consensus 111 ~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~ 188 (247)
||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|.+ .|.||||+|+..|..
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999999999998775 478999999988753
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.92 E-value=1.9e-23 Score=160.51 Aligned_cols=163 Identities=25% Similarity=0.270 Sum_probs=138.6
Q ss_pred cCcCCCCHHHHHHHcCCHHHHHHHHHhCCCC-----Ccc--------------------------CCCCChhHHHHHhcC
Q psy599 72 ETVEGAPPLWCAAAAGHLPIVQFLVEHGAKV-----NSK--------------------------TRTNSTPLRAACFDG 120 (247)
Q Consensus 72 ~~~~~~t~l~~A~~~~~~~~~~~Ll~~~~~~-----~~~--------------------------~~~~~~~l~~a~~~~ 120 (247)
.|.++.+.++.+...|+..+.+++....... ... .....++|+.|+..+
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 5667888999999999987776664322111 000 001235789999999
Q ss_pred ChHHHHHHHHCCCCc------ccCCCCCCCHHHHHHHc---ChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHH
Q psy599 121 HFGVVKYLVEHGADF------EVSNRHGHTCLMIACYK---GHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEIL 191 (247)
Q Consensus 121 ~~~~~~~Ll~~~~~~------~~~~~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i 191 (247)
+.+.+..+++.|.++ +..+..|.||||+|+.. ++.+++++|+++|++++.+|..|.||||+|+..|+.+++
T Consensus 142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v 221 (278)
T 1dcq_A 142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECL 221 (278)
T ss_dssp CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence 999999999999884 44578899999999999 899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhh
Q psy599 192 KLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSR 234 (247)
Q Consensus 192 ~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~ 234 (247)
++|+++|++++. +..|.||||+|+..|+.+++++|++.|+...
T Consensus 222 ~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 222 KLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 999999999997 8999999999999999999999999998643
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.91 E-value=5.8e-24 Score=176.22 Aligned_cols=136 Identities=21% Similarity=0.220 Sum_probs=112.0
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCCCcc------CCCCChhHHHHHh---cCChHHHHHHHHCCCCcccCCCCCCCHH
Q psy599 76 GAPPLWCAAAAGHLPIVQFLVEHGAKVNSK------TRTNSTPLRAACF---DGHFGVVKYLVEHGADFEVSNRHGHTCL 146 (247)
Q Consensus 76 ~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~------~~~~~~~l~~a~~---~~~~~~~~~Ll~~~~~~~~~~~~~~t~l 146 (247)
..+.||.|+..|+.+.++.|++.|++++.+ +..|.||||+|+. .|+.+++++|+++|++++.++..|.|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 346799999999999999999999988877 7789999999966 7889999999999999999999999999
Q ss_pred HHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCHHHHHHH
Q psy599 147 MIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDVDSYGMTPLLAAAV 216 (247)
Q Consensus 147 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~~~~g~t~l~~A~~ 216 (247)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++. +|+|.+..
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~-----~~~h~~~~ 276 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA-----FPLHVDYS 276 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC-----Ccceeecc
Confidence 999999999999999999999999999999999999999999999999999988763 45665543
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=5.8e-24 Score=168.83 Aligned_cols=144 Identities=24% Similarity=0.276 Sum_probs=112.8
Q ss_pred CCCCHHHHHHHc-CCHHHHHHHHHhCCCCCccC--CCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHH
Q psy599 75 EGAPPLWCAAAA-GHLPIVQFLVEHGAKVNSKT--RTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACY 151 (247)
Q Consensus 75 ~~~t~l~~A~~~-~~~~~~~~Ll~~~~~~~~~~--~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~ 151 (247)
.+.|+||.|+.. ++.++++.|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 345789999999 99999999999999998887 788999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCC---C-CCCCCCHHHHHHHcC
Q psy599 152 KGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMD---V-DSYGMTPLLAAAVVG 218 (247)
Q Consensus 152 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~---~-~~~g~t~l~~A~~~~ 218 (247)
.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+..+.... . +..+.|+++++....
T Consensus 278 ~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 278 LGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred cCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998775432 1 455677777666543
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=2.3e-23 Score=133.64 Aligned_cols=90 Identities=42% Similarity=0.621 Sum_probs=62.5
Q ss_pred CCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCH
Q psy599 142 GHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQ 220 (247)
Q Consensus 142 ~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~ 220 (247)
|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 56677777777777777777777777766666777777777777777777777777776665 66677777777777777
Q ss_pred HHHHHHHhcCh
Q psy599 221 HIVEYLIGLNI 231 (247)
Q Consensus 221 ~~~~~Ll~~g~ 231 (247)
+++++|++.|+
T Consensus 82 ~~~~~Ll~~ga 92 (93)
T 1n0q_A 82 EVVKLLLEAGA 92 (93)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 77777776665
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=4.2e-23 Score=158.59 Aligned_cols=172 Identities=16% Similarity=0.193 Sum_probs=139.3
Q ss_pred ccCCCchHHHHHHhcCcHHHHHHHHHhcccC----cccccc-----c-----c----ccc----cCcCCCCHHHHHHHcC
Q psy599 30 FKFGGATPLIMACRNGHKEIVEYLVKECKAD----VEETGA-----V-----M----FDH----ETVEGAPPLWCAAAAG 87 (247)
Q Consensus 30 ~~~~g~t~L~~A~~~g~~~~~~~ll~~~~~~----~~~~~~-----~-----~----~~~----~~~~~~t~l~~A~~~~ 87 (247)
.|.-+.+.++.+...|+....+++-...+.. +..... . + +.. ......++|+.|+..|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 3555777899998889877766654322111 000000 0 0 000 0112245799999999
Q ss_pred CHHHHHHHHHhCCCCC------ccCCCCChhHHHHHhc---CChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHH
Q psy599 88 HLPIVQFLVEHGAKVN------SKTRTNSTPLRAACFD---GHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIV 158 (247)
Q Consensus 88 ~~~~~~~Ll~~~~~~~------~~~~~~~~~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 158 (247)
+.+.++.++..|.+++ ..+..|.||||+|+.. ++.+++++|+++|++++.++..|.||||+|+..|+.+++
T Consensus 142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v 221 (278)
T 1dcq_A 142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECL 221 (278)
T ss_dssp CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence 9999999999998844 4478899999999999 899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCC
Q psy599 159 KYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARM 201 (247)
Q Consensus 159 ~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~ 201 (247)
++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+..
T Consensus 222 ~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 222 KLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999999864
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=4.8e-23 Score=170.74 Aligned_cols=128 Identities=23% Similarity=0.231 Sum_probs=117.9
Q ss_pred CChhHHHHHhcCChHHHHHHHHCCCCcccC------CCCCCCHHHHHHH---cChHHHHHHHHhcCCCccccCCCCCcHH
Q psy599 109 NSTPLRAACFDGHFGVVKYLVEHGADFEVS------NRHGHTCLMIACY---KGHYRIVKYLLSLNADMNRKSSKGNTAL 179 (247)
Q Consensus 109 ~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~------~~~~~t~l~~a~~---~~~~~~~~~Ll~~~~~~~~~~~~~~t~l 179 (247)
..+.|+.|+..|+.++++.|++.|++++.. +..|.||||+|+. .|+.+++++|+++|++++.+|..|+|||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpL 211 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 211 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHH
Confidence 346799999999999999999999999877 8899999999977 8999999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChhhhhh
Q psy599 180 HDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIVSRKE 236 (247)
Q Consensus 180 ~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~ 236 (247)
|+|+..|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|++.|++....
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999997 899999999999999999999999999988764
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=5.5e-23 Score=163.23 Aligned_cols=126 Identities=25% Similarity=0.276 Sum_probs=119.0
Q ss_pred CCCChhHHHHHhc-CChHHHHHHHHCCCCcccCC--CCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy599 107 RTNSTPLRAACFD-GHFGVVKYLVEHGADFEVSN--RHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCA 183 (247)
Q Consensus 107 ~~~~~~l~~a~~~-~~~~~~~~Ll~~~~~~~~~~--~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~ 183 (247)
..+.++||.|+.. ++.++++.|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++..|..|.||||+|+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHAT 276 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 3456899999999 99999999999999999988 88999999999999999999999999999999999999999999
Q ss_pred HhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhcChh
Q psy599 184 EAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLIGLNIV 232 (247)
Q Consensus 184 ~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 232 (247)
..|+.+++++|+++|++++. +..|.|||++|+..++.+++++|++.|..
T Consensus 277 ~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 277 ILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 99999999999999999997 88999999999999999999999987643
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=6.8e-23 Score=131.43 Aligned_cols=92 Identities=45% Similarity=0.681 Sum_probs=65.2
Q ss_pred CChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCH
Q psy599 109 NSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSI 188 (247)
Q Consensus 109 ~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~ 188 (247)
|.||||+|+..|+.+++++|++++++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 56677777777777777777777777776677777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHcCCC
Q psy599 189 EILKLLLSHGAR 200 (247)
Q Consensus 189 ~~i~~Ll~~g~~ 200 (247)
+++++|+++|++
T Consensus 82 ~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 82 EVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 777777777653
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=1.3e-22 Score=135.44 Aligned_cols=98 Identities=39% Similarity=0.565 Sum_probs=37.9
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCCCccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcCh
Q psy599 75 EGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGH 154 (247)
Q Consensus 75 ~~~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 154 (247)
.|.|+||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++++++++.++..|.||||+|+..++
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~ 87 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGH 87 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCC
Confidence 33334444444344444443333333333333333333333333333333333333333333333333333333333333
Q ss_pred HHHHHHHHhcCCCccccC
Q psy599 155 YRIVKYLLSLNADMNRKS 172 (247)
Q Consensus 155 ~~~~~~Ll~~~~~~~~~~ 172 (247)
.+++++|+++|++++.++
T Consensus 88 ~~~~~~Ll~~ga~~n~~~ 105 (115)
T 2l6b_A 88 HEIVKLLDAKGADVNARS 105 (115)
T ss_dssp HHHHHHHHTTSSSHHHHS
T ss_pred HHHHHHHHHcCCCCCcCC
Confidence 333333333333333333
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=2.1e-22 Score=134.33 Aligned_cols=108 Identities=36% Similarity=0.472 Sum_probs=100.8
Q ss_pred ccCCCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy599 104 SKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCA 183 (247)
Q Consensus 104 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~ 183 (247)
.++..|.||||+|+..++.+++++|++++++++..+..|.||||.|+..++.+++++|+++|++++.++..|.||||+|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCHHHHHHHHHcCCCCCC-CCCCCCHH
Q psy599 184 EAGSIEILKLLLSHGARMDV-DSYGMTPL 211 (247)
Q Consensus 184 ~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l 211 (247)
..|+.+++++|+++|++++. +..|.+|-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999987 77777763
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.81 E-value=1.2e-19 Score=119.82 Aligned_cols=89 Identities=30% Similarity=0.425 Sum_probs=56.8
Q ss_pred CCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCCHHHHHHH
Q psy599 138 SNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAV 216 (247)
Q Consensus 138 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~-~~~g~t~l~~A~~ 216 (247)
.+..|.|+||.|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++. +..|.|||++|+.
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHH
Confidence 445566666666666666666666666666666666666666666666666666666666666654 5566666666666
Q ss_pred cCCHHHHHHH
Q psy599 217 VGHQHIVEYL 226 (247)
Q Consensus 217 ~~~~~~~~~L 226 (247)
.++.+++++|
T Consensus 100 ~~~~~~~~~L 109 (110)
T 2zgd_A 100 NGNEDLAEIL 109 (110)
T ss_dssp HTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 6666666654
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=3.1e-19 Score=117.88 Aligned_cols=88 Identities=28% Similarity=0.423 Sum_probs=43.6
Q ss_pred CCCChhHHHHHhcCChHHHHHHHHCCCCcccCCCCCCCHHHHHHHcChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Q psy599 107 RTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAG 186 (247)
Q Consensus 107 ~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 186 (247)
..|.++||+|+..|+.+++++|++++++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 101 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNG 101 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcC
Confidence 34444444444444444444444444444444444455555555555555555555555555445555555555555555
Q ss_pred CHHHHHHH
Q psy599 187 SIEILKLL 194 (247)
Q Consensus 187 ~~~~i~~L 194 (247)
+.+++++|
T Consensus 102 ~~~~~~~L 109 (110)
T 2zgd_A 102 NEDLAEIL 109 (110)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHh
Confidence 55554443
No 115
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=68.90 E-value=11 Score=30.96 Aligned_cols=145 Identities=12% Similarity=0.042 Sum_probs=77.7
Q ss_pred HHHHHHhcCcHHHHHHHHHhcccCccccccccccccCcCCCCHHHHHHHc-C-------------CHHHHHHHHHhCCCC
Q psy599 37 PLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAA-G-------------HLPIVQFLVEHGAKV 102 (247)
Q Consensus 37 ~L~~A~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~-~-------------~~~~~~~Ll~~~~~~ 102 (247)
.|...++.|+.+-+..+++..... + ..+|....+.|..++.. + ..++++.+...|..+
T Consensus 32 ~id~c~k~G~~~~A~~lf~~M~~~-----G---v~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~P 103 (501)
T 4g26_A 32 KLDMCSKKGDVLEALRLYDEARRN-----G---VQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVP 103 (501)
T ss_dssp HHHHTTTSCCHHHHHHHHHHHHHH-----T---CCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHc-----C---CCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCC
Confidence 466677888887766666542211 0 11122223333333322 2 135677777888877
Q ss_pred CccCCCCChhHHHHHhcCChHHHHHH----HHCCCCcccCCCCCCCHHHHHHHcChHHHHHH----HHhcCCCccccCCC
Q psy599 103 NSKTRTNSTPLRAACFDGHFGVVKYL----VEHGADFEVSNRHGHTCLMIACYKGHYRIVKY----LLSLNADMNRKSSK 174 (247)
Q Consensus 103 ~~~~~~~~~~l~~a~~~~~~~~~~~L----l~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~----Ll~~~~~~~~~~~~ 174 (247)
+.... .+.+...++.|..+.+..+ .+.|..++... ..+.+...+..|+.+-+.. +.+.|+.++....
T Consensus 104 d~~ty--n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty- 178 (501)
T 4g26_A 104 NEATF--TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS--YGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPEL- 178 (501)
T ss_dssp CHHHH--HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHH-
T ss_pred CHHHH--HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce--ehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHH-
Confidence 65432 2456667788887654444 35566554322 1234445566777655443 3456766655432
Q ss_pred CCcHHHHHHHhCCHHHHHHHH
Q psy599 175 GNTALHDCAEAGSIEILKLLL 195 (247)
Q Consensus 175 ~~t~l~~a~~~~~~~~i~~Ll 195 (247)
.+.+...++.|+.+-+..++
T Consensus 179 -~~Li~~~~~~g~~d~A~~ll 198 (501)
T 4g26_A 179 -AALLKVSMDTKNADKVYKTL 198 (501)
T ss_dssp -HHHHHHHHHTTCHHHHHHHH
T ss_pred -HHHHHHHhhCCCHHHHHHHH
Confidence 24566667777765444333
No 116
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=63.34 E-value=11 Score=30.92 Aligned_cols=141 Identities=11% Similarity=0.045 Sum_probs=79.4
Q ss_pred HHHHHHcCCH----HHHHHHHHhCCCCCccCCCCChhHHHHHhc-CC-------------hHHHHHHHHCCCCcccCCCC
Q psy599 80 LWCAAAAGHL----PIVQFLVEHGAKVNSKTRTNSTPLRAACFD-GH-------------FGVVKYLVEHGADFEVSNRH 141 (247)
Q Consensus 80 l~~A~~~~~~----~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~-~~-------------~~~~~~Ll~~~~~~~~~~~~ 141 (247)
|..+++.|+. ++++.+.+.|..++... .+.|..++.. +. .++++.+...|..++...
T Consensus 33 id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~t---yn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~t-- 107 (501)
T 4g26_A 33 LDMCSKKGDVLEALRLYDEARRNGVQLSQYH---YNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEAT-- 107 (501)
T ss_dssp HHHTTTSCCHHHHHHHHHHHHHHTCCCCHHH---HHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHH--
T ss_pred HHHHHhCCCHHHHHHHHHHHHHcCCCCCHhH---HHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHH--
Confidence 4556667765 45556667788776543 2344444432 21 245666667777665432
Q ss_pred CCCHHHHHHHcChHHHHHHHH----hcCCCccccCCCCCcHHHHHHHhCCHH----HHHHHHHcCCCCCCCCCCCCHHHH
Q psy599 142 GHTCLMIACYKGHYRIVKYLL----SLNADMNRKSSKGNTALHDCAEAGSIE----ILKLLLSHGARMDVDSYGMTPLLA 213 (247)
Q Consensus 142 ~~t~l~~a~~~~~~~~~~~Ll----~~~~~~~~~~~~~~t~l~~a~~~~~~~----~i~~Ll~~g~~~~~~~~g~t~l~~ 213 (247)
..+.+...+..|+.+.+..++ +.|..++.... .+.+...++.|..+ +.+.+.+.|..++.. .-.+.+..
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~-ty~~Li~~ 184 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY--GPALFGFCRKGDADKAYEVDAHMVESEVVPEEP-ELAALLKV 184 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHH-HHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee--hHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHH-HHHHHHHH
Confidence 133455566778876554444 45666655442 24566667778765 445555777665421 11234566
Q ss_pred HHHcCCHHHHHHHHh
Q psy599 214 AAVVGHQHIVEYLIG 228 (247)
Q Consensus 214 A~~~~~~~~~~~Ll~ 228 (247)
.++.|+.+-+.-+++
T Consensus 185 ~~~~g~~d~A~~ll~ 199 (501)
T 4g26_A 185 SMDTKNADKVYKTLQ 199 (501)
T ss_dssp HHHTTCHHHHHHHHH
T ss_pred HhhCCCHHHHHHHHH
Confidence 677787766655553
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=57.00 E-value=37 Score=27.07 Aligned_cols=61 Identities=18% Similarity=0.097 Sum_probs=36.7
Q ss_pred cChHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Q psy599 152 KGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDVDSYGMTPLLAAAVVGHQHIVEYLIGLN 230 (247)
Q Consensus 152 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~i~~Ll~~g~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g 230 (247)
.|+...++..+..|.++..+ -|....+.- ++.+ .-..|.|.+|+|++..+.+++-.|+.-+
T Consensus 32 e~~~~~ve~y~~~gg~~~r~----lt~~e~~ll------------n~~~--af~~g~tlvhlair~~r~~~l~~ll~~~ 92 (454)
T 3zrh_A 32 EGDLAAIEAYKSSGGDIARQ----LTADEVRLL------------NRPS--AFDVGYTLVHLAIRFQRQDMLAILLTEV 92 (454)
T ss_dssp HTCHHHHHHHHTTTCCTTCC----CCHHHHHHH------------CCTT--TCCTTCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCChhHHHHHHhcCCchhcc----cCHHHHHHh------------CCCc--ccccCchhhhhhhhhhhhhHHHHhhhcc
Confidence 46666666666666665432 222222211 1111 1345888899999999999888888643
No 118
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=46.29 E-value=27 Score=17.20 Aligned_cols=19 Identities=21% Similarity=0.184 Sum_probs=16.3
Q ss_pred HHHHHhcCcHHHHHHHHHh
Q psy599 38 LIMACRNGHKEIVEYLVKE 56 (247)
Q Consensus 38 L~~A~~~g~~~~~~~ll~~ 56 (247)
+..||..|+++.++.|=.+
T Consensus 17 iyvA~seGd~etv~~Le~Q 35 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKAK 35 (40)
T ss_dssp HHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHH
Confidence 8899999999999988543
No 119
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=33.68 E-value=1.2e+02 Score=24.29 Aligned_cols=49 Identities=12% Similarity=0.137 Sum_probs=37.0
Q ss_pred HHHHcCCHHHHHHHHHhCCCCCcc--------------CCCCChhHHHHHhcCChHHHHHHHH
Q psy599 82 CAAAAGHLPIVQFLVEHGAKVNSK--------------TRTNSTPLRAACFDGHFGVVKYLVE 130 (247)
Q Consensus 82 ~A~~~~~~~~~~~Ll~~~~~~~~~--------------~~~~~~~l~~a~~~~~~~~~~~Ll~ 130 (247)
..+..|+...++..+.+|.+++.+ -.-|.|.+|.|++..+.+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 345668888888888877765432 1247888999999999999888886
No 120
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=22.49 E-value=54 Score=25.57 Aligned_cols=26 Identities=19% Similarity=0.049 Sum_probs=17.4
Q ss_pred cCCCchHHHHHHhcCcHHHHHHHHHh
Q psy599 31 KFGGATPLIMACRNGHKEIVEYLVKE 56 (247)
Q Consensus 31 ~~~g~t~L~~A~~~g~~~~~~~ll~~ 56 (247)
|..|+-.+......+..+....+++.
T Consensus 75 d~~gn~vvQkll~~~~~~~~~~i~~~ 100 (369)
T 3k49_A 75 DVFGNYVIQKFFEFGSKIQKNTLVDQ 100 (369)
T ss_dssp STTTHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CcccccHHHHHHHhCCHHHHHHHHHH
Confidence 55677777777777776666666654
Done!