RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy599
(247 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 125 bits (315), Expect = 1e-34
Identities = 62/226 (27%), Positives = 91/226 (40%), Gaps = 43/226 (19%)
Query: 36 TPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFL 95
TPL +A GH IV+ L+ + A + V+ PL AA AGH + ++L
Sbjct: 2 TPLHVASFMGHLPIVKNLL-QRGASPNVS--------NVKVETPLHMAARAGHTEVAKYL 52
Query: 96 VEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEH------------------------ 131
+++ AKVN+K + + TPL A GH +VK L+E+
Sbjct: 53 LQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHV 112
Query: 132 ---------GADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDC 182
A + G T L +A G R+ + LL +A N G T LH
Sbjct: 113 ETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVA 172
Query: 183 AEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLI 227
+++I+KLLL G G TPL AA + L+
Sbjct: 173 VHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLL 218
Score = 118 bits (296), Expect = 9e-32
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 33/243 (13%)
Query: 34 GATPLIMACRNGHKEIVEYLVKECKADVEETG-------------------------AVM 68
G TPL +A + + +IV+ L
Sbjct: 165 GLTPLHVAVHHNNLDIVKLL-LPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS 223
Query: 69 FDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYL 128
+ E+V+G PL AA GH +V L+ A N ++ TPL +GH V L
Sbjct: 224 ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVL 283
Query: 129 VEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSI 188
++HG + + R G+T L +A + G+ ++VK+LL AD+N K+ G + LH A+ G
Sbjct: 284 IKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT 343
Query: 189 EILKLLLSHGARMD-VDSYGMTPLLAAAVVGHQHIVEYLIGLN------IVSRKEKIDAL 241
+I+ LLL +GA + V S G TPL A +G+ + + L + +VS K ++
Sbjct: 344 DIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFP 403
Query: 242 ELL 244
E +
Sbjct: 404 ETV 406
Score = 113 bits (283), Expect = 5e-30
Identities = 62/226 (27%), Positives = 92/226 (40%), Gaps = 43/226 (19%)
Query: 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQ 93
TPL MA R GH E+ +YL+ + KA V + + + PL CAA GH +V+
Sbjct: 33 VETPLHMAARAGHTEVAKYLL-QNKAKV--------NAKAKDDQTPLHCAARIGHTNMVK 83
Query: 94 FLVEH---------------------------------GAKVNSKTRTNSTPLRAACFDG 120
L+E+ A T+ TPL A G
Sbjct: 84 LLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYG 143
Query: 121 HFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALH 180
V + L+E A + ++G T L +A + + IVK LL + + G T LH
Sbjct: 144 KVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLH 203
Query: 181 DCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEY 225
A+ +E+ + LL +G + G+TPL AA GH +V
Sbjct: 204 IAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVAL 249
Score = 112 bits (281), Expect = 9e-30
Identities = 59/228 (25%), Positives = 86/228 (37%), Gaps = 43/228 (18%)
Query: 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQ 93
G TPL +A + G + E L+ E A + G PL A +L IV+
Sbjct: 132 GFTPLHVAAKYGKVRVAELLL-ERDAHP--------NAAGKNGLTPLHVAVHHNNLDIVK 182
Query: 94 FLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKG 153
L+ G +S TPL A V + L+++G + G T L +A +G
Sbjct: 183 LLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEG 242
Query: 154 HYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMD----------- 202
H +V LLS A+ N + G T LH A+ G + + +L+ HG +D
Sbjct: 243 HAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLH 302
Query: 203 -----------------------VDSYGMTPLLAAAVVGHQHIVEYLI 227
G +PL AA GH IV L+
Sbjct: 303 VASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL 350
Score = 110 bits (276), Expect = 6e-29
Identities = 58/219 (26%), Positives = 88/219 (40%), Gaps = 25/219 (11%)
Query: 34 GATPLIMACRNGHKEIVEYLVKE------------------------CKADVEETGAVMF 69
TPL A R GH +V+ L++
Sbjct: 66 DQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQ 125
Query: 70 DHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLV 129
T +G PL AA G + + + L+E A N+ + TPL A + +VK L+
Sbjct: 126 ACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLL 185
Query: 130 EHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIE 189
G +G+T L IA + + + LL N +S +G T LH A+ G E
Sbjct: 186 PRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAE 245
Query: 190 ILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLI 227
++ LLLS A ++ + G+TPL A GH + + LI
Sbjct: 246 MVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLI 284
Score = 109 bits (273), Expect = 2e-28
Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 13/193 (6%)
Query: 21 HEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPL 80
+ G TPL +A + GH E+V L+ + + G PL
Sbjct: 218 LQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQA---------NGNLGNKSGLTPL 268
Query: 81 WCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNR 140
A GH+P+ L++HG V++ TR TPL A G+ +VK+L++H AD +
Sbjct: 269 HLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTK 328
Query: 141 HGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEI---LKLLLSH 197
G++ L A +GH IV LL A N SS G T L G I + LK++
Sbjct: 329 LGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDE 388
Query: 198 GARMDV-DSYGMT 209
+ + V D + M+
Sbjct: 389 TSFVLVSDKHRMS 401
Score = 29.6 bits (65), Expect = 0.41
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 208 MTPLLAAAVVGHQHIVEYLI 227
+TPL A+ +GH IV+ L+
Sbjct: 1 LTPLHVASFMGHLPIVKNLL 20
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 108 bits (271), Expect = 4e-29
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 5/148 (3%)
Query: 25 QMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAA 84
+ + + GGAT L+ A GH E+++ L+ E ADV + + L +
Sbjct: 139 EDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALI----HALLSSD 194
Query: 85 AAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEH-GADFEVSNRHGH 143
+ I L++HGA VN + TPL A H G+V+ L+E + ++ G
Sbjct: 195 DSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK 254
Query: 144 TCLMIACYKGHYRIVKYLLSLNADMNRK 171
T L++A +I + L A +
Sbjct: 255 TALLLAVELKLKKIAELLCKRGASTDCG 282
Score = 108 bits (269), Expect = 7e-29
Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 7/190 (3%)
Query: 21 HEEIQMVTKFKFGGATPLIMACRNGHKEIVEY-LVKECKADVEETGAVMFDHETVEGAPP 79
+ V + F G T + A G + +++ + ++ + GA
Sbjct: 92 LSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATA 151
Query: 80 LWCAAAAGHLPIVQFLVEH-GAKVNSKTR----TNSTPLRAACFDGHFGVVKYLVEHGAD 134
L AA GH+ +++ L++ GA VN+ L ++ + L++HGAD
Sbjct: 152 LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD 211
Query: 135 FEVSNRHGHTCLMIACYKGHYRIVKYLLSLN-ADMNRKSSKGNTALHDCAEAGSIEILKL 193
V G T L++A K H +V+ LL ++N S G TAL E +I +L
Sbjct: 212 VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAEL 271
Query: 194 LLSHGARMDV 203
L GA D
Sbjct: 272 LCKRGASTDC 281
Score = 102 bits (254), Expect = 1e-26
Identities = 57/236 (24%), Positives = 85/236 (36%), Gaps = 41/236 (17%)
Query: 33 GGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHE-------------------- 72
GG TPL A + ++IVE L++ V
Sbjct: 38 GGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGAD 97
Query: 73 ----TVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSK----------TRTNSTPLRAACF 118
G AA G + ++FL + GA VN + + +T L A
Sbjct: 98 VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157
Query: 119 DGHFGVVKYLVEH-GADFEVSNRHGHTCLMIACYKGHYR----IVKYLLSLNADMNRKSS 173
GH V+K L++ GAD + G L+ A I LL AD+N +
Sbjct: 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE 217
Query: 174 KGNTALHDCAEAGSIEILKLLLSH-GARMD-VDSYGMTPLLAAAVVGHQHIVEYLI 227
+G T L E + +++ LL ++ DS G T LL A + + I E L
Sbjct: 218 RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLC 273
Score = 85.8 bits (211), Expect = 1e-20
Identities = 62/241 (25%), Positives = 93/241 (38%), Gaps = 57/241 (23%)
Query: 36 TPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFL 95
LI A +N ++V+ L+ E A+V E G PL A IV+ L
Sbjct: 7 HLLIKAVQNEDVDLVQQLL-EGGANVNFQ-------EEEGGWTPLHNAVQMSREDIVELL 58
Query: 96 VEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHY 155
+ HGA + + +TP A G ++K + GAD + +G T M A G
Sbjct: 59 LRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 118
Query: 156 RIVKYLLSLNADMNRK----------SSKGNTALHDCAEAGSIEILKLLL---------- 195
+ +K+L A++N + G TAL D AE G +E+LK+LL
Sbjct: 119 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNAC 178
Query: 196 ----------------------------SHGARMDV-DSYGMTPLLAAAVVGHQHIVEYL 226
HGA ++V G TPL+ A H +V+ L
Sbjct: 179 DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238
Query: 227 I 227
+
Sbjct: 239 L 239
Score = 80.0 bits (196), Expect = 2e-18
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Query: 74 VEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTN-STPLRAACFDGHFGVVKYLVEHG 132
VE L A + +VQ L+E GA VN + TPL A +V+ L+ HG
Sbjct: 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 62
Query: 133 ADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILK 192
AD + ++G T ++A G +++K LS AD+N G TA + A G ++ LK
Sbjct: 63 ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALK 122
Query: 193 LLLSHGARMD-----------VDSYGMTPLLAAAVVGHQHIVEYLI 227
L GA ++ + G T L+ AA GH +++ L+
Sbjct: 123 FLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILL 168
Score = 52.3 bits (124), Expect = 1e-08
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 172 SSKGNTALHDCAEAGSIEILKLLLSHGARMDV--DSYGMTPLLAAAVVGHQHIVEYLI 227
+ + N L + +++++ LL GA ++ + G TPL A + + IVE L+
Sbjct: 2 AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL 59
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 103 bits (258), Expect = 8e-28
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQ 93
T L AC GH EIVE+L++ + + G PL AA+AG IV+
Sbjct: 37 SRTALHWACSAGHTEIVEFLLQLGV---------PVNDKDDAGWSPLHIAASAGRDEIVK 87
Query: 94 FLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKG 153
L+ GA+VN+ + TPL A + L+E GA+ + + + T + A KG
Sbjct: 88 ALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKG 147
Query: 154 HYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLL 212
+ +++ LL A N + ++GNT LH + +E KLL+S GA + + + TPL
Sbjct: 148 NLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQ 207
Query: 213 AAAVVGHQHIVEYLI 227
A G I++ ++
Sbjct: 208 VAK-GGLGLILKRMV 221
Score = 82.3 bits (202), Expect = 1e-19
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Query: 80 LWCAAAAGHLPIV-QFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVS 138
+ A +G L + + ++ + + + T L AC GH +V++L++ G
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66
Query: 139 NRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHG 198
+ G + L IA G IVK LL A +N + G T LH A EI +LL G
Sbjct: 67 DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 126
Query: 199 ARMDV-DSYGMTPLLAAAVVGHQHIVEYL 226
A D D Y T + AA G+ ++ L
Sbjct: 127 ANPDAKDHYEATAMHRAAAKGNLKMIHIL 155
Score = 45.3 bits (106), Expect = 2e-06
Identities = 27/120 (22%), Positives = 39/120 (32%), Gaps = 35/120 (29%)
Query: 143 HTCLMIACYKGHYRIVK-YLLSLNADMNRKSSKGNTALHDCAEAG--------------- 186
+ + Y G +K +L+ + R TALH AG
Sbjct: 4 NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 63
Query: 187 ------------------SIEILKLLLSHGARMD-VDSYGMTPLLAAAVVGHQHIVEYLI 227
EI+K LL GA+++ V+ G TPL AA I L+
Sbjct: 64 NDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLL 123
Score = 36.5 bits (83), Expect = 0.002
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 10/64 (15%)
Query: 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQ 93
G TPL +AC E + LV A + E E PL A G I++
Sbjct: 169 GNTPLHLACDEERVEEAKLLV-SQGASI--------YIENKEEKTPLQVAKG-GLGLILK 218
Query: 94 FLVE 97
+VE
Sbjct: 219 RMVE 222
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 106 bits (265), Expect = 9e-28
Identities = 25/218 (11%), Positives = 58/218 (26%), Gaps = 18/218 (8%)
Query: 21 HEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEE---TGAVMFDHETVEGA 77
+ + A + + +++ + L A + ++
Sbjct: 33 SANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLY-YAHYNRNAKQLWSDAHKKGIKSE 91
Query: 78 PPLWCAAAAGHLPI---VQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGAD 134
+ AA G + L+ V N R A +GH V+ L E
Sbjct: 92 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPT 151
Query: 135 FEVSNR--HGHTCLMIACYKGHYRIVKYLLSLNADMNR---KSSKGNTALHDCAEAGSIE 189
++ + +A GH ++ L L ++ G
Sbjct: 152 EIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHN 211
Query: 190 ILKLLLSHGARMDVDSYGMTPLLAAAVVGHQHIVEYLI 227
++ LL + + G +++ ++
Sbjct: 212 VINFLLDCPVMLA------YAEIHEFEYGEKYVNPFIA 243
Score = 104 bits (261), Expect = 3e-27
Identities = 34/243 (13%), Positives = 58/243 (23%), Gaps = 32/243 (13%)
Query: 9 YTHYQAFLEARTHEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLVK--ECKADVEETGA 66
Y A + K +A G ++ L V+ A
Sbjct: 65 LCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQA 124
Query: 67 VMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRT--NSTPLRAACFDGHFGV 124
E AA GHL ++ L E N R A +GH V
Sbjct: 125 --------ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHV 176
Query: 125 VKYLVEHGA---DFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHD 181
+ L E + + + A +GH+ ++ +LL +
Sbjct: 177 LNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEK 236
Query: 182 -------CAEAGSIEILKLLLSHGARMDVD----------SYGMTPLLAAAVVGHQHIVE 224
E+ D Y + L+ +
Sbjct: 237 YVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIR 296
Query: 225 YLI 227
+L+
Sbjct: 297 FLL 299
Score = 98.0 bits (243), Expect = 1e-24
Identities = 32/225 (14%), Positives = 58/225 (25%), Gaps = 44/225 (19%)
Query: 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQ 93
+A NGH ++ L E AA GHL ++
Sbjct: 126 NYQAFRLAAENGHLHVLNRLC-ELAPTEIMAMIQAE------NYHAFRLAAENGHLHVLN 178
Query: 94 FLVEHGAKVNS---KTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRH--------- 141
L E + + AA GH V+ +L++ + H
Sbjct: 179 RLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYV 238
Query: 142 -------------GHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSI 188
H ++ G + +V + L + +
Sbjct: 239 NPFIARHVNRLKEMHDAFKLSNPDGVFDLV------TKSECLQGFYMLRNLIRRNDEVLL 292
Query: 189 EILKLLLSHGA------RMDVDSYGMTPLLAAAVVGHQHIVEYLI 227
+ ++ LLS + L A +G+Q L+
Sbjct: 293 DDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLL 337
Score = 77.2 bits (189), Expect = 4e-17
Identities = 28/193 (14%), Positives = 50/193 (25%), Gaps = 41/193 (21%)
Query: 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQ 93
+A NGH ++ L + + + W A GH ++
Sbjct: 161 NYHAFRLAAENGHLHVLNRLCELAPTEAT------AMIQAENYYAFRWAAVGRGHHNVIN 214
Query: 94 FLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFE-------VSNRHGH--- 143
FL++ + G V ++ H + +SN G
Sbjct: 215 FLLDCPVMLA-------YAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDL 267
Query: 144 -------------TCLMIACYKGHYRIVKYLLSLNADMNRKS-----SKGNTALHDCAEA 185
L+ + +++LLS+ N L
Sbjct: 268 VTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRL 327
Query: 186 GSIEILKLLLSHG 198
G+ LLLS
Sbjct: 328 GNQGACALLLSIP 340
Score = 71.8 bits (175), Expect = 3e-15
Identities = 19/163 (11%), Positives = 40/163 (24%), Gaps = 24/163 (14%)
Query: 7 DEYTHYQAFLEARTHEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGA 66
+ Y A + H I + A I G K + ++ + E
Sbjct: 196 NYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKE---- 251
Query: 67 VMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVK 126
+ G +V + L + ++
Sbjct: 252 ---------MHDAFKLSNPDGVFDLVT------KSECLQGFYMLRNLIRRNDEVLLDDIR 296
Query: 127 YLVEHGADFEVSNRH-----GHTCLMIACYKGHYRIVKYLLSL 164
+L+ ++ + L +A G+ LLS+
Sbjct: 297 FLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI 339
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 90.1 bits (222), Expect = 3e-22
Identities = 43/243 (17%), Positives = 66/243 (27%), Gaps = 55/243 (22%)
Query: 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQ 93
G T L +A + H+ +++L+ A E D + G L AA G V+
Sbjct: 9 GDTALHLAVIHQHEPFLDFLL-GFSAGHEY-----LDLQNDLGQTALHLAAILGEASTVE 62
Query: 94 FLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHG----------- 142
L GA V R T L AC L++
Sbjct: 63 KLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD 122
Query: 143 ---HTCLMIACYKGHYRIVKYLLSLNADMNRKSSKG------------------------ 175
+ + + ++ G
Sbjct: 123 TSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA 182
Query: 176 ----------NTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVE 224
T LH EA + +L+LLL GA G TPL +A + + +
Sbjct: 183 DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILAR 242
Query: 225 YLI 227
L
Sbjct: 243 LLR 245
Score = 83.2 bits (204), Expect = 1e-19
Identities = 31/171 (18%), Positives = 54/171 (31%), Gaps = 6/171 (3%)
Query: 40 MACRNGHKEIVEYLVKECKADVEETG-----AVMFDHETVEGAPPLWCAAAAGHLPIVQF 94
+ACR L++ + + AP +
Sbjct: 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPR 143
Query: 95 LVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGH-TCLMIACYKG 153
+ ++ ++ TPL A +V+ L + GAD T L +A
Sbjct: 144 DEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQ 203
Query: 154 HYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDVD 204
+++ LL AD + G T L + + +LL +HGA D
Sbjct: 204 AASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPED 254
Score = 69.0 bits (167), Expect = 2e-14
Identities = 33/151 (21%), Positives = 48/151 (31%), Gaps = 17/151 (11%)
Query: 69 FDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAK---VNSKTRTNSTPLRAACFDGHFGVV 125
F + T +G L A H P + FL+ A ++ + T L A G V
Sbjct: 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTV 61
Query: 126 KYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNT-------- 177
+ L GA V+ R GHT L +AC + LL R +S
Sbjct: 62 EKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTP 121
Query: 178 ------ALHDCAEAGSIEILKLLLSHGARMD 202
A D E +++
Sbjct: 122 DTSHAPAAVDSQPNPENEEEPRDEDWRLQLE 152
Score = 62.8 bits (151), Expect = 2e-12
Identities = 26/139 (18%), Positives = 41/139 (29%), Gaps = 3/139 (2%)
Query: 111 TPLRAACFDGHFGVVKYLVEHGADFE---VSNRHGHTCLMIACYKGHYRIVKYLLSLNAD 167
T L A H + +L+ A E + N G T L +A G V+ L + A
Sbjct: 11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG 70
Query: 168 MNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDVDSYGMTPLLAAAVVGHQHIVEYLI 227
+ G+TALH + +LL D+ + +
Sbjct: 71 VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAV 130
Query: 228 GLNIVSRKEKIDALELLGA 246
E+ E
Sbjct: 131 DSQPNPENEEEPRDEDWRL 149
Score = 34.3 bits (77), Expect = 0.009
Identities = 6/22 (27%), Positives = 8/22 (36%)
Query: 34 GATPLIMACRNGHKEIVEYLVK 55
G TPL A + + L
Sbjct: 225 GRTPLGSALLRPNPILARLLRA 246
Score = 30.8 bits (68), Expect = 0.12
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 203 VDSYGMTPLLAAAVVGHQHIVEYLI 227
V G T L A + H+ +++L+
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLL 29
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 90.5 bits (223), Expect = 4e-22
Identities = 35/196 (17%), Positives = 71/196 (36%), Gaps = 16/196 (8%)
Query: 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQ 93
G TPL + E+V++LV + ++ M + V+ + + ++
Sbjct: 107 GNTPLHWLTSIANLELVKHLV-KHGSNRLYGDN-MGESCLVKAVKSVNNYDSGTFEALLD 164
Query: 94 FLVEHGAKVNSKTRTNSTPL-RAACFDGHFGVVKYLVE---------HGADFEVSNRHGH 143
+L +S RT + + G KY ++ +
Sbjct: 165 YLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKE 224
Query: 144 TCLMIACYKGHYRIVKYLLS---LNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGAR 200
+ + I++ L + +N + S G+T L+ A G+I I+ LL +GA
Sbjct: 225 SKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD 284
Query: 201 MDV-DSYGMTPLLAAA 215
+ + G+ P+ A
Sbjct: 285 PFIANKSGLRPVDFGA 300
Score = 75.5 bits (184), Expect = 1e-16
Identities = 36/174 (20%), Positives = 64/174 (36%), Gaps = 21/174 (12%)
Query: 75 EGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFG-------VVKY 127
G PL + +L +V+ LV+HG+ + L A + ++ Y
Sbjct: 106 HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDY 165
Query: 128 LVEHGADFEVSNRHG-HTCLMIACYKGHYRIVKYLLSL---------NADMNRKSSKGNT 177
L + NR H ++ + G KY L + N + +++ +
Sbjct: 166 LYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKES 225
Query: 178 ALHDCAEAGSIEILKLLLSHGARMDV----DSYGMTPLLAAAVVGHQHIVEYLI 227
+D IL+ L ++ DS G T L AA +G+ IV+ L+
Sbjct: 226 KPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALL 279
Score = 59.3 bits (142), Expect = 5e-11
Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 19/162 (11%)
Query: 91 IVQFLVEHGAKVNSKTRTN-STPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIA 149
+ +N + +TPL + +VK+LV+HG++ + G +CL+ A
Sbjct: 88 VNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKA 147
Query: 150 CYKGH----YRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIE------------ILKL 193
+ L L + + S T LH + ++
Sbjct: 148 VKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGW 207
Query: 194 LLSHGAR--MDVDSYGMTPLLAAAVVGHQHIVEYLIGLNIVS 233
++ R + + I+E L I++
Sbjct: 208 IVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIA 249
Score = 46.6 bits (109), Expect = 9e-07
Identities = 21/154 (13%), Positives = 43/154 (27%), Gaps = 2/154 (1%)
Query: 89 LPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVS-NRHGHTCLM 147
L I++ L N + L+ F + L ++
Sbjct: 19 LKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQH 78
Query: 148 IACYKGHYRIVKYLLSLNADMNRKS-SKGNTALHDCAEAGSIEILKLLLSHGARMDVDSY 206
++ + + ++N GNT LH ++E++K L+ HG+
Sbjct: 79 VSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDN 138
Query: 207 GMTPLLAAAVVGHQHIVEYLIGLNIVSRKEKIDA 240
L AV + + +
Sbjct: 139 MGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL 172
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 87.2 bits (214), Expect = 1e-21
Identities = 46/194 (23%), Positives = 69/194 (35%), Gaps = 9/194 (4%)
Query: 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQ 93
G T L +A R + + L+ + P AA
Sbjct: 23 GETSLHLAARFARADAAKRLLDAGA--------DANSQDNTGRTPLHAAVAADAMGVFQI 74
Query: 94 FLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKG 153
L +N++ +TPL A G+V+ L+ AD ++ G T L A
Sbjct: 75 LLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVN 134
Query: 154 HYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLL 212
+ V LL +A+ + + K T L A GS E K LL + A ++ D P
Sbjct: 135 NTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRD 194
Query: 213 AAAVVGHQHIVEYL 226
A+ H IV L
Sbjct: 195 VASERLHHDIVRLL 208
Score = 45.6 bits (106), Expect = 1e-06
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 124 VVKYLVEHGADF-EVSNRHGHTCLMIACYKGHYRIVKYL 161
V+ L+ GA+ ++ G T L +A K L
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRL 42
Score = 44.8 bits (104), Expect = 3e-06
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 187 SIEILKLLLSHGARMD--VDSYGMTPLLAAAVVGHQHIVEYL 226
+ +++ LL+ GA ++ +D G T L AA + L
Sbjct: 1 TAQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRL 42
Score = 39.8 bits (91), Expect = 1e-04
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 156 RIVKYLLSLNADMNRKSSK-GNTALHDCAEAGSIEILKLLLSHGARMDVDSYGM 208
+++ LL+ A++N K G T+LH A + K LL GA +
Sbjct: 3 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTG 56
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 88.6 bits (218), Expect = 2e-21
Identities = 53/258 (20%), Positives = 87/258 (33%), Gaps = 54/258 (20%)
Query: 28 TKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETG---------AVMFDHETVEGAP 78
TK KF + AC +G E V L+ E AD+ A + D+ +
Sbjct: 34 TKVKFDDGAVFLAACSSGDTEEVLRLL-ERGADINYANVDGLTALHQACIDDNVDMVKFL 92
Query: 79 ----------------PLWCAAAAGHLPIVQFLVEHGAKVNSKTR--------------- 107
PL AA+ G+L I ++L+ GA V +
Sbjct: 93 VENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAME 152
Query: 108 ------------TNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHY 155
+ ++L + + G T L +A KG+
Sbjct: 153 ELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYT 212
Query: 156 RIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMD-VDSYGMTPLLAA 214
++K L+ D+N K G T LH A G E ++L+ + M+ V+ G T A
Sbjct: 213 EVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272
Query: 215 AVVGHQHIVEYLIGLNIV 232
++ E N++
Sbjct: 273 DEDILGYLEELQKKQNLL 290
Score = 64.7 bits (156), Expect = 6e-13
Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 13/127 (10%)
Query: 7 DEYTHYQAFLEARTHEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGA 66
+E + + G T L +A G+ E+++ L + + DV
Sbjct: 172 EEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL-IQARYDV----- 225
Query: 67 VMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVK 126
+ + +G PL AA G + LVE+ + + + T A D ++
Sbjct: 226 ---NIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED----ILG 278
Query: 127 YLVEHGA 133
YL E
Sbjct: 279 YLEELQK 285
Score = 46.6 bits (109), Expect = 8e-07
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 165 NADMNRKSSK----GNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGH 219
+ RK +K +G E + LL GA ++ + G+T L A + +
Sbjct: 26 PPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDN 85
Query: 220 QHIVEY 225
+V++
Sbjct: 86 VDMVKF 91
Score = 40.9 bits (94), Expect = 7e-05
Identities = 19/77 (24%), Positives = 25/77 (32%), Gaps = 13/77 (16%)
Query: 27 VTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAA 86
V + G TPL A G +E LV E D+ + G A
Sbjct: 225 VNIKDYDGWTPLHAAAHWGKEEACRILV-ENLCDM--------EAVNKVGQTAFDVADED 275
Query: 87 GHLPIVQFLVEHGAKVN 103
I+ +L E K N
Sbjct: 276 ----ILGYLEELQKKQN 288
Score = 28.9 bits (63), Expect = 0.55
Identities = 10/43 (23%), Positives = 14/43 (32%)
Query: 185 AGSIEILKLLLSHGARMDVDSYGMTPLLAAAVVGHQHIVEYLI 227
GS L+ + + V LAA G V L+
Sbjct: 18 IGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLL 60
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 86.3 bits (212), Expect = 1e-20
Identities = 46/243 (18%), Positives = 80/243 (32%), Gaps = 50/243 (20%)
Query: 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQ 93
T L N E E L+ + GA + + PL A A +V
Sbjct: 33 NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGA-DVNAMDCDENTPLMLAVLARRRRLVA 91
Query: 94 FLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGA-------------------- 133
+L++ GA ++ + L A + FG++ Y++
Sbjct: 92 YLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVA 151
Query: 134 ---------------------------DFEVSNRHGHTCLMIACYKGHYRIVKYLLSLN- 165
+ G T L A + IVKYL+
Sbjct: 152 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG 211
Query: 166 ADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMD-VDSYGMTPLLAAAVVGHQHIVE 224
++ +++ G T + A+ G IE++ L+ GA ++ VD+ T A H +IV+
Sbjct: 212 SNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVD 271
Query: 225 YLI 227
Sbjct: 272 IFD 274
Score = 60.5 bits (145), Expect = 2e-11
Identities = 28/134 (20%), Positives = 45/134 (33%), Gaps = 9/134 (6%)
Query: 83 AAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEH--------GAD 134
AAG I + + + R N T L + + L+ H GAD
Sbjct: 8 TEAAGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD 66
Query: 135 FEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLL 194
+ +T LM+A R+V YL+ AD + +ALH A ++ +
Sbjct: 67 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYM 126
Query: 195 LSHGARMDVDSYGM 208
L+
Sbjct: 127 LNSTKLKGDIEELD 140
Score = 59.0 bits (141), Expect = 6e-11
Identities = 50/250 (20%), Positives = 84/250 (33%), Gaps = 68/250 (27%)
Query: 36 TPLIMACR-NGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQF 94
+P+ + G I E + +E ++ L A+ +
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNIID----------PRHNRTVLHWIASNSSAEKSED 51
Query: 95 LVEH--------GAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCL 146
L+ H GA VN+ +TPL A +V YL++ GAD + N+ + L
Sbjct: 52 LIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSAL 111
Query: 147 MIACYKGHYRIVKYLLSL------------------------------------------ 164
A + ++ Y+L+
Sbjct: 112 HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK 171
Query: 165 -----NADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGA--RMDVDSYGMTPLLAAAVV 217
A + + KG TALH A+ ++ I+K L+ + D G TP++ AA
Sbjct: 172 VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE 231
Query: 218 GHQHIVEYLI 227
G +V YLI
Sbjct: 232 GRIEVVMYLI 241
Score = 34.7 bits (78), Expect = 0.007
Identities = 6/22 (27%), Positives = 9/22 (40%)
Query: 34 GATPLIMACRNGHKEIVEYLVK 55
T +A N H IV+ +
Sbjct: 254 DHTARQLAQANNHHNIVDIFDR 275
Score = 25.1 bits (53), Expect = 8.4
Identities = 8/36 (22%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Query: 209 TPL-LAAAVVGHQHIVEYLI--GLNIVSRKEKIDAL 241
+P+ L G I E + +NI+ + L
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVL 37
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 77.6 bits (189), Expect = 8e-18
Identities = 42/224 (18%), Positives = 76/224 (33%), Gaps = 34/224 (15%)
Query: 34 GATPLIMACRNGHKEIVEYLVK---ECKADVEETGA------------------------ 66
G TPL +A G+ V LV + +++
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62
Query: 67 -VMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNS----TPLRAACFDGH 121
G A ++ L++ A + T L A
Sbjct: 63 GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 122
Query: 122 FGVVKYLVEHGADFEVSNRHGHT-CLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALH 180
V+ L+E GAD + + L+ A +V+ LL A++N + G++ALH
Sbjct: 123 QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALH 182
Query: 181 DCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIV 223
+ G + +++ L+ GA + + + TPL+ A I+
Sbjct: 183 SASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 226
Score = 68.3 bits (165), Expect = 2e-14
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 6/154 (3%)
Query: 40 MACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHG 99
+AC + + L+ + A +D T L A VQ L+E G
Sbjct: 79 LACEHRSPTCLRALLDSAAPGTLDLEARNYDGLT-----ALHVAVNTECQETVQLLLERG 133
Query: 100 AKVNSKTRTNST-PLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIV 158
A +++ + PL A + +V+ L++HGA+ G + L A +G +V
Sbjct: 134 ADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLV 193
Query: 159 KYLLSLNADMNRKSSKGNTALHDCAEAGSIEILK 192
+ L+ AD + K+ +T L I+IL+
Sbjct: 194 RTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 66.8 bits (161), Expect = 7e-14
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 25 QMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAA 84
+ + G T L +A +E V+ L++ A + + G PL A
Sbjct: 101 LDLEARNYDGLTALHVAVNTECQETVQLLLERG--------ADIDAVDIKSGRSPLIHAV 152
Query: 85 AAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHT 144
L +VQ L++HGA VN++ + S+ L +A G +V+ LV GAD + N H T
Sbjct: 153 ENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDT 212
Query: 145 CLMIACYKGHYRIVK 159
LM+A + I++
Sbjct: 213 PLMVARSRRVIDILR 227
Score = 50.6 bits (119), Expect = 3e-08
Identities = 42/196 (21%), Positives = 67/196 (34%), Gaps = 43/196 (21%)
Query: 75 EGAPPLWCAAAAGHLPIVQFLV----EHGAKVNSKTRTNSTPL----------------- 113
+G PL A G+LP V LV + G +++ TPL
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61
Query: 114 ----------------RAACFDGHFGVVKYLVEHGADFEVSNRH----GHTCLMIACYKG 153
AC ++ L++ A + G T L +A
Sbjct: 62 AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 121
Query: 154 HYRIVKYLLSLNADMNRKSSKG-NTALHDCAEAGSIEILKLLLSHG-ARMDVDSYGMTPL 211
V+ LL AD++ K + L E S+ +++LLL HG G + L
Sbjct: 122 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 181
Query: 212 LAAAVVGHQHIVEYLI 227
+A+ G +V L+
Sbjct: 182 HSASGRGLLPLVRTLV 197
Score = 39.4 bits (90), Expect = 2e-04
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 9/73 (12%)
Query: 21 HEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPL 80
+ V + G++ L A G +V LV AD + PL
Sbjct: 164 LQHGANVNAQMYSGSSALHSASGRGLLPLVRTLV-RSGADS--------SLKNCHNDTPL 214
Query: 81 WCAAAAGHLPIVQ 93
A + + I++
Sbjct: 215 MVARSRRVIDILR 227
Score = 28.7 bits (62), Expect = 0.65
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 207 GMTPLLAAAVVGHQHIVEYLIGLNI 231
G TPL A V G+ V L+ L
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQ 27
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 71.8 bits (174), Expect = 8e-16
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQ 93
G + L +A + K + ++++ K D+ +T PL A I +
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQT-----PLHLAVITNQPEIAE 56
Query: 94 FLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRH------GHTCLM 147
L+ G + +TPL AC G V L + + + GHTCL
Sbjct: 57 ALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLH 116
Query: 148 IACYKGHYRIVKYLLSLNAD-MNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMD-VDS 205
+A G+ IV+ L+SL AD ++ G TALH + + +++ LLL GA ++ V
Sbjct: 117 LASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTY 176
Query: 206 YGMTPLLAAAVVGHQHIVEYLI 227
G +P I + L
Sbjct: 177 QGYSPYQLTWGRPSTRIQQQLG 198
Score = 58.8 bits (140), Expect = 5e-11
Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 1/129 (0%)
Query: 40 MACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHG 99
+ + + ++ + G L A+ G+L IV+ LV G
Sbjct: 75 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLG 134
Query: 100 AKVNSKTRTN-STPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIV 158
A VN++ N T L A + +V L++ GAD G++ + + RI
Sbjct: 135 ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQ 194
Query: 159 KYLLSLNAD 167
+ L L +
Sbjct: 195 QQLGQLTLE 203
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 69.9 bits (169), Expect = 1e-15
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 36 TPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFL 95
L+ A R G + V L+ A G PL AA GH + L
Sbjct: 4 KKLLEAARAGQDDEVRILM-ANGAPF---------TTDWLGTSPLHLAAQYGHFSTTEVL 53
Query: 96 VEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHY 155
+ G +++T+ + TPL A +GH +V+ L++HGAD + T L A H
Sbjct: 54 LRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQ 113
Query: 156 RIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLL 194
+V+ L+ AD++ +S TA + G+ ++ ++L
Sbjct: 114 EVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 64.9 bits (156), Expect = 7e-14
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 79 PLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVS 138
L AA AG V+ L+ +GA ++PL A GHF + L+ G +
Sbjct: 5 KLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63
Query: 139 NRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHG 198
+ T L +A +GH IV+ LL AD+N K TALH E E+++LL+ +G
Sbjct: 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123
Query: 199 ARMDV-DSYGMTPLLAAAVVGHQHIVEYL 226
A + + T + G++ + E L
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 37.9 bits (86), Expect = 3e-04
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 175 GNTALHDCAEAGSIEILKLLLSHGARMDVDSYGMTP 210
L + A AG + +++L+++GA D G +P
Sbjct: 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSP 37
Score = 27.1 bits (58), Expect = 1.5
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 209 TPLLAAAVVGHQHIVEYLI 227
LL AA G V L+
Sbjct: 4 KKLLEAARAGQDDEVRILM 22
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 68.3 bits (165), Expect = 2e-14
Identities = 41/233 (17%), Positives = 74/233 (31%), Gaps = 52/233 (22%)
Query: 36 TPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFL 95
PL AC V+ L+ + + + +G PL + + I FL
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLL--------LQKDQDGRIPLHWSVSFQAHEITSFL 53
Query: 96 VEHG--------------------------------------AKVNSKTRTNSTPLRAAC 117
+ +N T T L A
Sbjct: 54 LSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAV 113
Query: 118 FDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNR-KSSKGN 176
F V ++L+E+GA + ++ L A G ++++ L L + +G
Sbjct: 114 GKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGW 173
Query: 177 TALHDCAEAGSIEILKLLLS-HGARMD-VDSYGMTPLLAAAVVGHQHIVEYLI 227
T L G + LL+ +GA D VD+ G A ++ + ++ +
Sbjct: 174 TPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFL 223
Score = 49.0 bits (115), Expect = 1e-07
Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 14/161 (8%)
Query: 9 YTHYQAFLEARTHEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVM 68
+ + + K G T L +A E+ ++L++
Sbjct: 80 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGA---------S 130
Query: 69 FDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAK-VNSKTRTNSTPLRAACFDGHFGVVKY 127
+ PL AA+ G L +++ L G VN + + TPL A +GH
Sbjct: 131 VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVL 190
Query: 128 LVE-HGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNAD 167
LVE +GA++++ + G +A + ++ K+ L+ D
Sbjct: 191 LVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVVD 228
Score = 42.1 bits (97), Expect = 2e-05
Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 2/48 (4%)
Query: 176 NTALHDCAEAGSIEILKLLL-SHGARMDV-DSYGMTPLLAAAVVGHQH 221
N LH ++ LL S + + D G PL +
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHE 48
Score = 38.6 bits (88), Expect = 3e-04
Identities = 18/97 (18%), Positives = 29/97 (29%), Gaps = 11/97 (11%)
Query: 4 LTLDEYTHYQAFLEARTHEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEE 63
L +E V G TPL A GH + LV++ A+
Sbjct: 142 LHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY-- 199
Query: 64 TGAVMFDHETVEGAPPLWCAAAAGHLPIVQFLVEHGA 100
D +GA A + + +F + +
Sbjct: 200 ------DLVDNKGAKAEDVAL---NEQVKKFFLNNVV 227
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 64.3 bits (155), Expect = 7e-14
Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 3/126 (2%)
Query: 79 PLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVS 138
L ++ G +VQ ++ + T L A GH +VK+LV+ G + +
Sbjct: 4 LLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAA 63
Query: 139 NRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGN---TALHDCAEAGSIEILKLLL 195
+ G T L A + ++ K+L+ A + + + E G + + L
Sbjct: 64 DSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLY 123
Query: 196 SHGARM 201
+M
Sbjct: 124 GVQEKM 129
Score = 58.1 bits (139), Expect = 2e-11
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Query: 111 TPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNR 170
L + +G F +V+ ++ D + N G T L A GH IVK+L+ ++N
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 171 KSSKGNTALHDCAEAGSIEILKLLLSHGARMDV----DSYGMTPLLAAAVVGHQHIVEYL 226
S G T LH A ++++ K L+ GA + D G+ ++L
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122
Query: 227 IGL 229
G+
Sbjct: 123 YGV 125
Score = 53.1 bits (126), Expect = 8e-10
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 12/136 (8%)
Query: 36 TPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFL 95
L+ + G ++V+ ++ E EG L A AGH IV+FL
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEV---------DDPSLPNDEGITALHNAVCAGHTEIVKFL 53
Query: 96 VEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGAD-FEVSNRHGHTC--LMIACYK 152
V+ G VN+ TPL A + V K+LVE GA F ++ T +
Sbjct: 54 VQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEE 113
Query: 153 GHYRIVKYLLSLNADM 168
G+ + ++L + M
Sbjct: 114 GYTQCSQFLYGVQEKM 129
Score = 32.3 bits (72), Expect = 0.017
Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 6/94 (6%)
Query: 9 YTHYQAFLEARTHEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLVKECKADVEETGAVM 68
+ + V G TPL A + ++ ++LV E A V
Sbjct: 42 VCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLV-ESGAAVFAM---- 96
Query: 69 FDHETVEGAPPLWCAAAAGHLPIVQFLVEHGAKV 102
+ ++ A G+ QFL K+
Sbjct: 97 -TYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 129
Score = 25.0 bits (53), Expect = 7.0
Identities = 5/20 (25%), Positives = 12/20 (60%)
Query: 208 MTPLLAAAVVGHQHIVEYLI 227
+ LL +++ G +V+ +I
Sbjct: 2 LALLLDSSLEGEFDLVQRII 21
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 63.8 bits (154), Expect = 2e-13
Identities = 23/131 (17%), Positives = 39/131 (29%), Gaps = 9/131 (6%)
Query: 79 PLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNS------TPLRAACFDGHFG---VVKYLV 129
L A + + G + K + T L A +V +LV
Sbjct: 9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLV 68
Query: 130 EHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIE 189
++ + + G T L C + +K LL A + + G T L
Sbjct: 69 QNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEH 128
Query: 190 ILKLLLSHGAR 200
+LL +
Sbjct: 129 CEELLTQALSG 139
Score = 62.7 bits (151), Expect = 5e-13
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 2/133 (1%)
Query: 36 TPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAA-GHLPIVQF 94
L A + + + D+ E + HE E A L + L IV F
Sbjct: 8 HSLCEAVKTRDIFGLLQAYAD-GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDF 66
Query: 95 LVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGH 154
LV++ ++ +T ST L C + +K L+ A E++N G T L IA H
Sbjct: 67 LVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKH 126
Query: 155 YRIVKYLLSLNAD 167
+ L +
Sbjct: 127 EHCEELLTQALSG 139
Score = 57.7 bits (138), Expect = 3e-11
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 10/134 (7%)
Query: 104 SKTRTNSTPLRAACFDGHFGVVKYLVEHGADF------EVSNRHGHTCLMIACY---KGH 154
+ T L A + G D + T L +A +
Sbjct: 1 ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTS 60
Query: 155 YRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLA 213
IV +L+ + ++++++ KG+TALH C + E LKLLL A +++ + G TPL
Sbjct: 61 LHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 120
Query: 214 AAVVGHQHIVEYLI 227
A + H+H E L
Sbjct: 121 AKRLKHEHCEELLT 134
Score = 45.7 bits (107), Expect = 6e-07
Identities = 17/111 (15%), Positives = 36/111 (32%), Gaps = 12/111 (10%)
Query: 34 GATPLIMACRN---GHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLP 90
T L +A R+ IV++L + ++++ +
Sbjct: 45 DETALHLAVRSVDRTSLHIVDFL-VQNSGNLDKQTGKGSTAL--------HYCCLTDNAE 95
Query: 91 IVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRH 141
++ L+ A + + TPL A H + L + + S+ H
Sbjct: 96 CLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVH 146
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 59.8 bits (143), Expect = 6e-12
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 10/164 (6%)
Query: 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQ 93
L A G + V L+ + G I
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTA---------LQVMMFGSTAIAL 52
Query: 94 FLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKG 153
L++ GA N + + ++P+ A G +K LVEHGAD V + G + +A +G
Sbjct: 53 ELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEG 112
Query: 154 HYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSH 197
H +V +L + +D++R+ ++G T L + G+ +++ +L H
Sbjct: 113 HTAVVSFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155
Score = 58.3 bits (139), Expect = 2e-11
Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 2/151 (1%)
Query: 79 PLWCAAAAGHLPIVQFLVE-HGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEV 137
L AAA G + V+ L+ ++ R T G + L++ GA V
Sbjct: 5 RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTA-LQVMMFGSTAIALELLKQGASPNV 63
Query: 138 SNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSH 197
+ G + + A G +K L+ AD+N G +H + G ++ L +
Sbjct: 64 QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123
Query: 198 GARMDVDSYGMTPLLAAAVVGHQHIVEYLIG 228
D+ G+TPL A G Q +V+ L G
Sbjct: 124 SDLHRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 34.4 bits (77), Expect = 0.005
Identities = 8/49 (16%), Positives = 17/49 (34%)
Query: 6 LDEYTHYQAFLEARTHEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLV 54
+ + + G TPL +A + G +++V+ L
Sbjct: 105 IHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 30.9 bits (68), Expect = 0.085
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 140 RHGHTCLMIACYKGHYRIVKYLLSLN-ADMNRKSSKGNTALHDC 182
R G L A +G + V+ LL + + G TAL
Sbjct: 1 RAGDR-LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVM 43
Score = 27.9 bits (60), Expect = 0.80
Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 174 KGNTALHDCAEAGSIEILKLLL-SHGARMD-VDSYGMTP 210
+ L A G ++ ++ LL D ++ +G T
Sbjct: 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTA 39
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 57.6 bits (137), Expect = 5e-11
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 3/151 (1%)
Query: 79 PLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVS 138
L AAA G L + L+++ VN++ G+ + + L+ GA+ ++
Sbjct: 4 ELASAAARGDLEQLTSLLQNNVNVNAQNG-FGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 139 NRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHG 198
+R G + A G ++ LL AD+N + ++GN LH A+ G + +++ L+ H
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122
Query: 199 ARMD--VDSYGMTPLLAAAVVGHQHIVEYLI 227
A + G T A + G +V +
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 153
Score = 55.7 bits (132), Expect = 2e-10
Identities = 22/163 (13%), Positives = 46/163 (28%), Gaps = 9/163 (5%)
Query: 36 TPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFL 95
L A G E + L+ + +V + + G L + L
Sbjct: 3 NELASAAARGDLEQLTSLL-QNNVNV--------NAQNGFGRTALQVMKLGNPEIARRLL 53
Query: 96 VEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHY 155
+ + AA + L N + A
Sbjct: 54 LRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLR 113
Query: 156 RIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLLSHG 198
+ + +++ ++ KG+TA G E++ L+ ++G
Sbjct: 114 VVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 34.9 bits (78), Expect = 0.004
Identities = 6/22 (27%), Positives = 9/22 (40%)
Query: 34 GATPLIMACRNGHKEIVEYLVK 55
G T +A G E+V +
Sbjct: 133 GDTACDLARLYGRNEVVSLMQA 154
Score = 32.9 bits (73), Expect = 0.015
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 177 TALHDCAEAGSIEILKLLLSHGARMDV-DSYGM 208
L A G +E L LL + ++ + +G
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGR 35
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 55.3 bits (131), Expect = 2e-10
Identities = 22/121 (18%), Positives = 41/121 (33%)
Query: 76 GAPPLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADF 135
A L AAA G + V+ L+E GA N+ P++ L+
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62
Query: 136 EVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILKLLL 195
+ A +G + L A ++ + + G + E G ++ + L
Sbjct: 63 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122
Query: 196 S 196
+
Sbjct: 123 A 123
Score = 48.0 bits (112), Expect = 6e-08
Identities = 24/130 (18%), Positives = 41/130 (31%), Gaps = 9/130 (6%)
Query: 34 GATPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQ 93
A L A G E V L++ + G P+
Sbjct: 3 SADWLATAAARGRVEEVRALLEAG---------ANPNAPNSYGRRPIQVMMMGSARVAEL 53
Query: 94 FLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKG 153
L+ + T + P+ A +G + L GA +V + G + +A G
Sbjct: 54 LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG 113
Query: 154 HYRIVKYLLS 163
H + +YL +
Sbjct: 114 HRDVARYLRA 123
Score = 46.1 bits (107), Expect = 3e-07
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Query: 109 NSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADM 168
++ L A G V+ L+E GA+ N +G + + LL
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62
Query: 169 NRKSSKGNTALHDCAEAGSIEILKLLLSHGARMD-VDSYGMTPLLAAAVVGHQHIVEYLI 227
+ +HD A G ++ L +L GAR+D D++G P+ A +GH+ + YL
Sbjct: 63 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122
Score = 33.4 bits (74), Expect = 0.008
Identities = 8/45 (17%), Positives = 14/45 (31%)
Query: 9 YTHYQAFLEARTHEEIQMVTKFKFGGATPLIMACRNGHKEIVEYL 53
H + G P+ +A GH+++ YL
Sbjct: 77 AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 121
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 43.4 bits (100), Expect = 2e-06
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 13/127 (10%)
Query: 36 TPLIMACRNGHKEIVEYLVKECKADVEETGAVMFDHETVEGAPPLWCAAAAGHLPIVQFL 95
+ A +NG + V+ V + + + G PL AA G L I++FL
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGE---------DVNRTLEGGRKPLHYAADCGQLEILEFL 54
Query: 96 VEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHY 155
+ GA +N+ + + TPL +A ++GH VK L+ GAD V G T L +
Sbjct: 55 LLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQA-- 112
Query: 156 RIVKYLL 162
+K LL
Sbjct: 113 --IKALL 117
Score = 42.6 bits (98), Expect = 4e-06
Identities = 36/114 (31%), Positives = 48/114 (42%)
Query: 79 PLWCAAAAGHLPIVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGADFEVS 138
A G L V+ V G VN PL A G ++++L+ GAD
Sbjct: 5 EFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAP 64
Query: 139 NRHGHTCLMIACYKGHYRIVKYLLSLNADMNRKSSKGNTALHDCAEAGSIEILK 192
++H T L+ A Y+GH VK LLS AD K G TAL +L+
Sbjct: 65 DKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKALLQ 118
Score = 38.3 bits (87), Expect = 1e-04
Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 5/118 (4%)
Query: 111 TPLRAACFDGHFGVVKYLVEHGADFEVSNRHGHTCLMIACYKGHYRIVKYLLSLNADMNR 170
A +G VK V G D + G L A G I+++LL AD+N
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63
Query: 171 KSSKGNTALHDCAEAGSIEILKLLLSHGARMDV-DSYGMTPLLAAAVVGHQHIVEYLI 227
T L G + +KLLLS GA V G+T L A ++ L+
Sbjct: 64 PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEAT----DNQAIKALL 117
Score = 24.9 bits (52), Expect = 5.8
Identities = 4/34 (11%), Positives = 13/34 (38%)
Query: 175 GNTALHDCAEAGSIEILKLLLSHGARMDVDSYGM 208
+ + G ++ +K ++ G ++ G
Sbjct: 2 CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGG 35
>d1knxa1 c.98.2.1 (A:1-132) HPr kinase/phoshatase HprK N-terminal
domain {Mycoplasma pneumoniae [TaxId: 2104]}
Length = 132
Score = 25.1 bits (55), Expect = 5.9
Identities = 8/45 (17%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 14 AFLEARTHEEIQMVTKFKFGGATPLIMACRNGHKEIVEYLVKECK 58
FL +T E Q + P I+ ++ L++ +
Sbjct: 62 GFLSQKTLVEQQQILHNLLKLNPPAIILTKS--FTDPTVLLQVNQ 104
>d2qwva1 c.116.1.7 (A:5-205) Uncharacterized protein VCA1059 {Vibrio
cholerae [TaxId: 666]}
Length = 201
Score = 25.1 bits (55), Expect = 7.8
Identities = 8/41 (19%), Positives = 11/41 (26%), Gaps = 6/41 (14%)
Query: 169 NRKSSKGNTALHDCAEAGSIEIL------KLLLSHGARMDV 203
+ L + EIL L + R DV
Sbjct: 9 RSAPTDSQRLLDEIGGKCHTEILAHCMMNSLFTAQSHREDV 49
>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase,
HppD {Corn (Zea mays) [TaxId: 4577]}
Length = 172
Score = 24.8 bits (53), Expect = 8.2
Identities = 8/41 (19%), Positives = 13/41 (31%)
Query: 91 IVQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEH 131
+ V GA+ R A + + VV V +
Sbjct: 113 AFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSY 153
>d2qmma1 c.116.1.7 (A:95-288) Uncharacterized protein AF1056
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 194
Score = 24.8 bits (54), Expect = 8.6
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Query: 170 RKSSKGNTALHDCAEAGSIEIL------KLLLSHGARMDVDSY 206
K+ +L+D AG +++L L +SHG R DV+ Y
Sbjct: 9 NKAFTQPFSLNDLPGAGRMDVLCRCTSQALFISHGIRRDVEVY 51
>d1eexa_ c.1.19.3 (A:) Diol dehydratase, alpha subunit {Klebsiella
oxytoca [TaxId: 571]}
Length = 551
Score = 25.2 bits (55), Expect = 9.5
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 11/43 (25%)
Query: 199 ARMDVD-----------SYGMTPLLAAAVVGHQHIVEYLIGLN 230
A M D + MTP VV H ++VE ++ +
Sbjct: 88 ANMLCDPNVKRSEIVPLTTAMTPAKIVEVVSHMNVVEMMMAMQ 130
>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase,
HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 167
Score = 24.8 bits (53), Expect = 9.5
Identities = 9/43 (20%), Positives = 16/43 (37%)
Query: 92 VQFLVEHGAKVNSKTRTNSTPLRAACFDGHFGVVKYLVEHGAD 134
V +GA +S + + A + VV V + A+
Sbjct: 119 FSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAE 161
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.135 0.405
Gapped
Lambda K H
0.267 0.0558 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 923,970
Number of extensions: 41574
Number of successful extensions: 445
Number of sequences better than 10.0: 1
Number of HSP's gapped: 236
Number of HSP's successfully gapped: 146
Length of query: 247
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 164
Effective length of database: 1,268,006
Effective search space: 207952984
Effective search space used: 207952984
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.2 bits)