Your job contains 1 sequence.
>psy5990
MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA
LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCISLSTYRYSNVQIF
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5990
(119 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0028692 - symbol:Rpn2 "Regulatory particle non-ATP... 361 6.5e-32 1
UNIPROTKB|J9P4R4 - symbol:PSMD1 "Uncharacterized protein"... 326 1.6e-28 1
UNIPROTKB|F1PX57 - symbol:PSMD1 "Uncharacterized protein"... 327 2.5e-28 1
UNIPROTKB|A7MBA2 - symbol:PSMD1 "Uncharacterized protein"... 326 3.2e-28 1
UNIPROTKB|Q99460 - symbol:PSMD1 "26S proteasome non-ATPas... 326 3.2e-28 1
UNIPROTKB|Q5R5S4 - symbol:PSMD1 "26S proteasome non-ATPas... 326 3.2e-28 1
MGI|MGI:1917497 - symbol:Psmd1 "proteasome (prosome, macr... 326 3.2e-28 1
RGD|621669 - symbol:Psmd1 "proteasome (prosome, macropain... 326 3.2e-28 1
UNIPROTKB|G3V8B6 - symbol:Psmd1 "26S proteasome non-ATPas... 326 3.2e-28 1
UNIPROTKB|F1NUT6 - symbol:PSMD1 "26S proteasome non-ATPas... 326 3.2e-28 1
UNIPROTKB|Q5F418 - symbol:PSMD1 "26S proteasome non-ATPas... 326 3.2e-28 1
UNIPROTKB|E1C5P3 - symbol:PSMD1 "26S proteasome non-ATPas... 326 3.3e-28 1
UNIPROTKB|F1LRN6 - symbol:Psmd1 "26S proteasome non-ATPas... 325 4.1e-28 1
ZFIN|ZDB-GENE-040426-810 - symbol:psmd1 "proteasome (pros... 321 1.1e-27 1
DICTYBASE|DDB_G0287953 - symbol:psmD1 "26S proteasome reg... 257 8.1e-21 1
TAIR|locus:2046402 - symbol:AT2G32730 species:3702 "Arabi... 251 3.7e-20 1
GENEDB_PFALCIPARUM|PF14_0632 - symbol:PF14_0632 "26S prot... 249 7.6e-20 1
UNIPROTKB|Q8IKH3 - symbol:PF14_0632 "26S proteasome subun... 249 7.6e-20 1
TAIR|locus:2010672 - symbol:AT1G04810 species:3702 "Arabi... 246 1.3e-19 1
POMBASE|SPBC17D11.07c - symbol:rpn2 "19S proteasome regul... 223 3.4e-17 1
CGD|CAL0003585 - symbol:RPN2 species:5476 "Candida albica... 215 2.4e-16 1
SGD|S000001337 - symbol:RPN2 "Subunit of the 26S proteaso... 213 3.9e-16 1
ASPGD|ASPL0000047917 - symbol:AN1700 species:162425 "Emer... 204 4.6e-15 1
WB|WBGene00004459 - symbol:rpn-2 species:6239 "Caenorhabd... 126 7.8e-07 1
UNIPROTKB|Q18115 - symbol:rpn-2 "26S proteasome non-ATPas... 126 7.8e-07 1
>FB|FBgn0028692 [details] [associations]
symbol:Rpn2 "Regulatory particle non-ATPase 2" species:7227
"Drosophila melanogaster" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase activity"
evidence=IDA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 EMBL:AE014297 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006508 GO:GO:0050790
GO:GO:0006974 GO:GO:0004175 GO:GO:0042176 GO:GO:0008540
BRENDA:3.4.25.1 eggNOG:COG5116 GeneTree:ENSGT00550000074915
KO:K03032 OMA:CVENAEL Pfam:PF01851 EMBL:AF145303 EMBL:AF186594
EMBL:AF312231 EMBL:AY069503 EMBL:BT001598 EMBL:BT044102
RefSeq:NP_651677.2 UniGene:Dm.6875 ProteinModelPortal:Q9V3P6
SMR:Q9V3P6 IntAct:Q9V3P6 MINT:MINT-745147 STRING:Q9V3P6
PaxDb:Q9V3P6 PRIDE:Q9V3P6 EnsemblMetazoa:FBtr0085385 GeneID:43449
KEGG:dme:Dmel_CG11888 UCSC:CG11888-RA CTD:6185 FlyBase:FBgn0028692
InParanoid:Q9V3P6 OrthoDB:EOG4BVQ8J PhylomeDB:Q9V3P6
GenomeRNAi:43449 NextBio:834007 Bgee:Q9V3P6 GermOnline:CG11888
Uniprot:Q9V3P6
Length = 1020
Score = 361 (132.1 bits), Expect = 6.5e-32, P = 6.5e-32
Identities = 68/106 (64%), Positives = 88/106 (83%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + AG+ISLLD+PM +LK F+LKKL++IVD+FWPE+SE+I+KIE+LHED+ FP+ KLA
Sbjct: 3 LTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENKLAG 62
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
+VASKV++HLGSF D+L YALGAGDLFDV Y +TII K CI
Sbjct: 63 MVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAK--CI 106
>UNIPROTKB|J9P4R4 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 Pfam:PF01851 EMBL:AAEX03014431
Ensembl:ENSCAFT00000044920 Uniprot:J9P4R4
Length = 701
Score = 326 (119.8 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 62/106 (58%), Positives = 86/106 (81%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + AG+ISLLD+ +LKEF+L KLN +V+DFW E+SE++ KIE+L+ED+GF + AA
Sbjct: 2 ITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
LVASKV++HLG+F +SL YALGAGDLF+V +++ YV+TII K CI
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAK--CI 105
>UNIPROTKB|F1PX57 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 OMA:CVENAEL Pfam:PF01851
EMBL:AAEX03014431 Ensembl:ENSCAFT00000017372 Uniprot:F1PX57
Length = 953
Score = 327 (120.2 bits), Expect = 2.5e-28, P = 2.5e-28
Identities = 62/103 (60%), Positives = 85/103 (82%)
Query: 4 VAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAALVA 63
+AG+ISLLD+ +LKEF+L KLN +V+DFW E+SE++ KIE+L+ED+GF + AALVA
Sbjct: 5 IAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAALVA 64
Query: 64 SKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
SKV++HLG+F +SL YALGAGDLF+V +++ YV+TII K CI
Sbjct: 65 SKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAK--CI 105
>UNIPROTKB|A7MBA2 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 eggNOG:COG5116
GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403 KO:K03032
OMA:CVENAEL Pfam:PF01851 CTD:5707 HOVERGEN:HBG007543
OrthoDB:EOG4X97GG EMBL:DAAA02006191 EMBL:BC151445 IPI:IPI00714855
RefSeq:NP_001094547.1 UniGene:Bt.27989 STRING:A7MBA2
Ensembl:ENSBTAT00000006754 GeneID:511803 KEGG:bta:511803
InParanoid:A7MBA2 NextBio:20870109 Uniprot:A7MBA2
Length = 953
Score = 326 (119.8 bits), Expect = 3.2e-28, P = 3.2e-28
Identities = 62/106 (58%), Positives = 86/106 (81%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + AG+ISLLD+ +LKEF+L KLN +V+DFW E+SE++ KIE+L+ED+GF + AA
Sbjct: 2 ITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
LVASKV++HLG+F +SL YALGAGDLF+V +++ YV+TII K CI
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAK--CI 105
>UNIPROTKB|Q99460 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0005838 "proteasome regulatory particle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0030234 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
SUPFAM:SSF48371 Reactome:REACT_21300 GO:GO:0006977
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 EMBL:AC009407 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 DrugBank:DB00188
GO:GO:0005838 eggNOG:COG5116 KO:K03032 OMA:CVENAEL Pfam:PF01851
CTD:5707 HOVERGEN:HBG007543 EMBL:D44466 EMBL:BC001053 EMBL:BC014013
EMBL:BC039845 EMBL:BC047897 EMBL:BC064398 EMBL:BC073833
EMBL:BC094720 EMBL:BC112344 EMBL:BC114434 IPI:IPI00299608
IPI:IPI00456695 RefSeq:NP_001177966.1 RefSeq:NP_002798.2
UniGene:Hs.3887 ProteinModelPortal:Q99460 SMR:Q99460 DIP:DIP-27548N
IntAct:Q99460 MINT:MINT-1160606 STRING:Q99460 PhosphoSite:Q99460
DMDM:51704332 PaxDb:Q99460 PRIDE:Q99460 Ensembl:ENST00000308696
Ensembl:ENST00000373635 Ensembl:ENST00000409643 GeneID:5707
KEGG:hsa:5707 UCSC:uc002vrm.2 UCSC:uc002vrn.2 GeneCards:GC02P231921
HGNC:HGNC:9554 HPA:CAB021092 neXtProt:NX_Q99460 PharmGKB:PA33899
InParanoid:Q99460 OrthoDB:EOG4X97GG PhylomeDB:Q99460
ChEMBL:CHEMBL1934 ChiTaRS:PSMD1 GenomeRNAi:5707 NextBio:22174
ArrayExpress:Q99460 Bgee:Q99460 CleanEx:HS_PSMD1
Genevestigator:Q99460 GermOnline:ENSG00000173692 Uniprot:Q99460
Length = 953
Score = 326 (119.8 bits), Expect = 3.2e-28, P = 3.2e-28
Identities = 62/106 (58%), Positives = 86/106 (81%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + AG+ISLLD+ +LKEF+L KLN +V+DFW E+SE++ KIE+L+ED+GF + AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
LVASKV++HLG+F +SL YALGAGDLF+V +++ YV+TII K CI
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAK--CI 105
>UNIPROTKB|Q5R5S4 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9601 "Pongo abelii" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 GeneTree:ENSGT00550000074915 KO:K03032 OMA:CVENAEL
Pfam:PF01851 CTD:5707 HOVERGEN:HBG007543 OrthoDB:EOG4X97GG
EMBL:CR860782 RefSeq:NP_001126695.1 UniGene:Pab.18654
ProteinModelPortal:Q5R5S4 PRIDE:Q5R5S4 Ensembl:ENSPPYT00000015422
GeneID:100173695 KEGG:pon:100173695 InParanoid:Q5R5S4
Uniprot:Q5R5S4
Length = 953
Score = 326 (119.8 bits), Expect = 3.2e-28, P = 3.2e-28
Identities = 62/106 (58%), Positives = 86/106 (81%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + AG+ISLLD+ +LKEF+L KLN +V+DFW E+SE++ KIE+L+ED+GF + AA
Sbjct: 2 ITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
LVASKV++HLG+F +SL YALGAGDLF+V +++ YV+TII K CI
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAK--CI 105
>MGI|MGI:1917497 [details] [associations]
symbol:Psmd1 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
MGI:MGI:1917497 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 eggNOG:COG5116 GeneTree:ENSGT00550000074915
HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL Pfam:PF01851 CTD:5707
HOVERGEN:HBG007543 OrthoDB:EOG4X97GG EMBL:AK153386 EMBL:AK159123
EMBL:BC138526 EMBL:BC138527 IPI:IPI00267295 RefSeq:NP_081633.1
UniGene:Mm.280013 ProteinModelPortal:Q3TXS7 SMR:Q3TXS7
IntAct:Q3TXS7 STRING:Q3TXS7 PhosphoSite:Q3TXS7 PaxDb:Q3TXS7
PRIDE:Q3TXS7 Ensembl:ENSMUST00000027432 GeneID:70247 KEGG:mmu:70247
UCSC:uc007buy.1 InParanoid:B2RRP8 NextBio:331246 Bgee:Q3TXS7
Genevestigator:Q3TXS7 Uniprot:Q3TXS7
Length = 953
Score = 326 (119.8 bits), Expect = 3.2e-28, P = 3.2e-28
Identities = 62/106 (58%), Positives = 86/106 (81%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + AG+ISLLD+ +LKEF+L KLN +V+DFW E+SE++ KIE+L+ED+GF + AA
Sbjct: 2 ITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
LVASKV++HLG+F +SL YALGAGDLF+V +++ YV+TII K CI
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAK--CI 105
>RGD|621669 [details] [associations]
symbol:Psmd1 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 eggNOG:COG5116
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 CTD:5707
HOVERGEN:HBG007543 OrthoDB:EOG4X97GG EMBL:AJ006340 IPI:IPI00212512
RefSeq:NP_114184.1 UniGene:Rn.2891 ProteinModelPortal:O88761
IntAct:O88761 STRING:O88761 PhosphoSite:O88761 PRIDE:O88761
GeneID:83806 KEGG:rno:83806 UCSC:RGD:621669 InParanoid:O88761
NextBio:616403 ArrayExpress:O88761 Genevestigator:O88761
GermOnline:ENSRNOG00000017730 Uniprot:O88761
Length = 953
Score = 326 (119.8 bits), Expect = 3.2e-28, P = 3.2e-28
Identities = 62/106 (58%), Positives = 86/106 (81%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + AG+ISLLD+ +LKEF+L KLN +V+DFW E+SE++ KIE+L+ED+GF + AA
Sbjct: 2 ITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
LVASKV++HLG+F +SL YALGAGDLF+V +++ YV+TII K CI
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAK--CI 105
>UNIPROTKB|G3V8B6 [details] [associations]
symbol:Psmd1 "26S proteasome non-ATPase regulatory subunit
1" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 GeneTree:ENSGT00550000074915
OMA:CVENAEL Pfam:PF01851 UniGene:Rn.2891 EMBL:CH474004
Ensembl:ENSRNOT00000024306 Uniprot:G3V8B6
Length = 953
Score = 326 (119.8 bits), Expect = 3.2e-28, P = 3.2e-28
Identities = 62/106 (58%), Positives = 86/106 (81%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + AG+ISLLD+ +LKEF+L KLN +V+DFW E+SE++ KIE+L+ED+GF + AA
Sbjct: 2 ITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
LVASKV++HLG+F +SL YALGAGDLF+V +++ YV+TII K CI
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAK--CI 105
>UNIPROTKB|F1NUT6 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 Pfam:PF01851 IPI:IPI00598268
EMBL:AADN02020638 Ensembl:ENSGALT00000012419 ArrayExpress:F1NUT6
Uniprot:F1NUT6
Length = 955
Score = 326 (119.8 bits), Expect = 3.2e-28, P = 3.2e-28
Identities = 62/106 (58%), Positives = 86/106 (81%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + AG+ISLLD+ +LKEF+L KLN +V+DFW E+SE++ KIE+L+ED+GF + AA
Sbjct: 2 ITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
LVASKV++HLG+F +SL YALGAGDLF+V +++ YV+TII K CI
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAK--CI 105
>UNIPROTKB|Q5F418 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032
Pfam:PF01851 EMBL:AJ851482 IPI:IPI00598268 RefSeq:NP_001012618.1
UniGene:Gga.12538 ProteinModelPortal:Q5F418 STRING:Q5F418
PRIDE:Q5F418 GeneID:424926 KEGG:gga:424926 CTD:5707
HOVERGEN:HBG007543 NextBio:20827189 Uniprot:Q5F418
Length = 955
Score = 326 (119.8 bits), Expect = 3.2e-28, P = 3.2e-28
Identities = 62/106 (58%), Positives = 86/106 (81%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + AG+ISLLD+ +LKEF+L KLN +V+DFW E+SE++ KIE+L+ED+GF + AA
Sbjct: 2 ITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
LVASKV++HLG+F +SL YALGAGDLF+V +++ YV+TII K CI
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAK--CI 105
>UNIPROTKB|E1C5P3 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 OMA:CVENAEL Pfam:PF01851
EMBL:AADN02020638 IPI:IPI00579067 Ensembl:ENSGALT00000012418
ArrayExpress:E1C5P3 Uniprot:E1C5P3
Length = 958
Score = 326 (119.8 bits), Expect = 3.3e-28, P = 3.3e-28
Identities = 62/106 (58%), Positives = 86/106 (81%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + AG+ISLLD+ +LKEF+L KLN +V+DFW E+SE++ KIE+L+ED+GF + AA
Sbjct: 2 ITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 61
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
LVASKV++HLG+F +SL YALGAGDLF+V +++ YV+TII K CI
Sbjct: 62 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAK--CI 105
>UNIPROTKB|F1LRN6 [details] [associations]
symbol:Psmd1 "26S proteasome non-ATPase regulatory subunit
1" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 Pfam:PF01851 IPI:IPI00949424
PRIDE:F1LRN6 Ensembl:ENSRNOT00000066613 ArrayExpress:F1LRN6
Uniprot:F1LRN6
Length = 952
Score = 325 (119.5 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 62/106 (58%), Positives = 86/106 (81%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + AG+ISLLD+ +LKEF+L KLN +V+DFW E+SE++ KIE+L+ED+GF + AA
Sbjct: 1 LTSQAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAA 60
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
LVASKV++HLG+F +SL YALGAGDLF+V +++ YV+TII K CI
Sbjct: 61 LVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAK--CI 104
>ZFIN|ZDB-GENE-040426-810 [details] [associations]
symbol:psmd1 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 1" species:7955 "Danio rerio" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
ZFIN:ZDB-GENE-040426-810 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GeneTree:ENSGT00550000074915 Pfam:PF01851
EMBL:BX571973 EMBL:CABZ01044354 IPI:IPI00506005
Ensembl:ENSDART00000144100 ArrayExpress:F1QY43 Uniprot:F1QY43
Length = 959
Score = 321 (118.1 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 64/114 (56%), Positives = 87/114 (76%)
Query: 6 GVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAALVASK 65
G+ISLLD+ +LKEF+L KLN +V+DFW E+SE++ KIE+L+ED+ F + AALVASK
Sbjct: 2 GIISLLDEDEPQLKEFALHKLNSVVNDFWAEISESVGKIEVLYEDETFRSREFAALVASK 61
Query: 66 VYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCISLST-YRYSNVQI 118
V++HLG+F +SL YALGAGDLF+V +D+ YV+TII K CI T R N ++
Sbjct: 62 VFYHLGAFDESLSYALGAGDLFNVNDDSEYVETIIAK--CIDHYTKQRVENAEL 113
>DICTYBASE|DDB_G0287953 [details] [associations]
symbol:psmD1 "26S proteasome regulatory subunit S1"
species:44689 "Dictyostelium discoideum" [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 dictyBase:DDB_G0287953
INTERPRO:IPR002015 GO:GO:0005634 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GenomeReviews:CM000154_GR GO:GO:0004175 GO:GO:0006511 GO:GO:0042176
EMBL:AAFI02000105 GO:GO:0005838 eggNOG:COG5116 KO:K03032
OMA:CVENAEL Pfam:PF01851 RefSeq:XP_636972.1
ProteinModelPortal:Q54JM5 IntAct:Q54JM5 STRING:Q54JM5 PRIDE:Q54JM5
EnsemblProtists:DDB0232977 GeneID:8626381 KEGG:ddi:DDB_G0287953
ProtClustDB:CLSZ2728851 Uniprot:Q54JM5
Length = 975
Score = 257 (95.5 bits), Expect = 8.1e-21, P = 8.1e-21
Identities = 48/104 (46%), Positives = 79/104 (75%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEV-SEAIQKIEILHEDKGFPQYKLA 59
+N+V+ +SLLD+ +ELK +SL+KL+ VD+FW E+ S +I KI+ L +K FP+++LA
Sbjct: 4 INSVSNYLSLLDEDQLELKSYSLEKLDSCVDEFWSEIASSSIDKIKSLSVNKQFPKHELA 63
Query: 60 ALVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKY 103
+LV SKVY++L F +S++YAL AG LF+V + + Y++T++ K+
Sbjct: 64 SLVLSKVYYNLSDFPNSMEYALSAGSLFNVLSKSEYIETLLYKF 107
>TAIR|locus:2046402 [details] [associations]
symbol:AT2G32730 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;TAS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0007010 "cytoskeleton organization" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0010498 "proteasomal
protein catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0030234 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 EMBL:AC003974 eggNOG:COG5116
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 EMBL:AY099861
IPI:IPI00538191 PIR:T00795 RefSeq:NP_180832.1 UniGene:At.19478
ProteinModelPortal:O48844 SMR:O48844 IntAct:O48844 STRING:O48844
PaxDb:O48844 PRIDE:O48844 ProMEX:O48844 EnsemblPlants:AT2G32730.1
GeneID:817833 KEGG:ath:AT2G32730 TAIR:At2g32730 InParanoid:O48844
OMA:LLCNFWG PhylomeDB:O48844 ProtClustDB:CLSN2681948
ArrayExpress:O48844 Genevestigator:O48844 Uniprot:O48844
Length = 1004
Score = 251 (93.4 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 49/104 (47%), Positives = 75/104 (72%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFP--QYKL 58
+++ G++++L++P LK +L LN++VD FWPE+S ++ IE L+ED+ F Q +L
Sbjct: 6 VSSAGGLLAMLNEPHPVLKLHALSNLNNLVDQFWPEISTSVPIIESLYEDEEFDLHQRQL 65
Query: 59 AALVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICK 102
AAL+ SKV+++LG +DSL YALGAG LFDV D+ YV T++ K
Sbjct: 66 AALLVSKVFYYLGELNDSLSYALGAGPLFDVSEDSDYVHTLLAK 109
>GENEDB_PFALCIPARUM|PF14_0632 [details] [associations]
symbol:PF14_0632 "26S proteasome subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0004175 EMBL:AE014187 GO:GO:0006511
GO:GO:0042176 InterPro:IPR004155 SMART:SM00567 GO:GO:0005838
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 RefSeq:XP_001348806.1
ProteinModelPortal:Q8IKH3 IntAct:Q8IKH3 MINT:MINT-1557099
PRIDE:Q8IKH3 EnsemblProtists:PF14_0632:mRNA GeneID:812214
KEGG:pfa:PF14_0632 EuPathDB:PlasmoDB:PF3D7_1466300 OMA:ANDENSH
ProtClustDB:CLSZ2733875 Uniprot:Q8IKH3
Length = 1172
Score = 249 (92.7 bits), Expect = 7.6e-20, P = 7.6e-20
Identities = 51/106 (48%), Positives = 78/106 (73%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + +GVI+LL++ LK F L+KLN IVD +WPE++++I KIE L ED+ F +LA
Sbjct: 13 VTSASGVIALLNEEETSLKLFGLEKLNAIVDVYWPELADSIFKIEELCEDEDFVGRELAN 72
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
L+ASK+YFHL +S++L+YAL AG LF+++ + YV+T++ K CI
Sbjct: 73 LLASKIYFHLEKYSEALKYALCAGKLFNIKEKSQYVETMLAK--CI 116
>UNIPROTKB|Q8IKH3 [details] [associations]
symbol:PF14_0632 "26S proteasome subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0004175 EMBL:AE014187 GO:GO:0006511
GO:GO:0042176 InterPro:IPR004155 SMART:SM00567 GO:GO:0005838
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 RefSeq:XP_001348806.1
ProteinModelPortal:Q8IKH3 IntAct:Q8IKH3 MINT:MINT-1557099
PRIDE:Q8IKH3 EnsemblProtists:PF14_0632:mRNA GeneID:812214
KEGG:pfa:PF14_0632 EuPathDB:PlasmoDB:PF3D7_1466300 OMA:ANDENSH
ProtClustDB:CLSZ2733875 Uniprot:Q8IKH3
Length = 1172
Score = 249 (92.7 bits), Expect = 7.6e-20, P = 7.6e-20
Identities = 51/106 (48%), Positives = 78/106 (73%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + +GVI+LL++ LK F L+KLN IVD +WPE++++I KIE L ED+ F +LA
Sbjct: 13 VTSASGVIALLNEEETSLKLFGLEKLNAIVDVYWPELADSIFKIEELCEDEDFVGRELAN 72
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCI 106
L+ASK+YFHL +S++L+YAL AG LF+++ + YV+T++ K CI
Sbjct: 73 LLASKIYFHLEKYSEALKYALCAGKLFNIKEKSQYVETMLAK--CI 116
>TAIR|locus:2010672 [details] [associations]
symbol:AT1G04810 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;TAS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0006302 "double-strand break repair"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010332 "response to
gamma radiation" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
EMBL:CP002684 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0030163 GO:GO:0000502 GO:GO:0042176
EMBL:AC004809 HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL
Pfam:PF01851 ProtClustDB:CLSN2681948 EMBL:BT004007 IPI:IPI00520284
PIR:C86181 RefSeq:NP_171973.1 UniGene:At.19689
ProteinModelPortal:Q9MAT0 SMR:Q9MAT0 IntAct:Q9MAT0 STRING:Q9MAT0
PRIDE:Q9MAT0 ProMEX:Q9MAT0 EnsemblPlants:AT1G04810.1 GeneID:839409
KEGG:ath:AT1G04810 TAIR:At1g04810 InParanoid:Q9MAT0
PhylomeDB:Q9MAT0 ArrayExpress:Q9MAT0 Genevestigator:Q9MAT0
Uniprot:Q9MAT0
Length = 1001
Score = 246 (91.7 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 48/104 (46%), Positives = 75/104 (72%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYK--L 58
+++ G++++L++P LK +L L +VD FWPE+S ++ IE L+ED+ F Q++ L
Sbjct: 6 VSSAGGLLAMLNEPHPSLKLHALSYLIRLVDQFWPEISTSVPIIESLYEDEEFDQHQRQL 65
Query: 59 AALVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICK 102
AAL+ASKV+++LG +DSL YALGAG LFDV D+ Y+ T++ K
Sbjct: 66 AALLASKVFYYLGELNDSLSYALGAGSLFDVSEDSDYIHTLLSK 109
>POMBASE|SPBC17D11.07c [details] [associations]
symbol:rpn2 "19S proteasome regulatory subunit Rpn2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISO] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0004175 "endopeptidase
activity" evidence=ISO] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 PomBase:SPBC17D11.07c INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0005634 GO:GO:0007346 GO:GO:0030234
SUPFAM:SSF48371 GO:GO:0043161 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GO:GO:0050790 GenomeReviews:CU329671_GR GO:GO:0042176
GO:GO:0008540 eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032
OMA:CVENAEL Pfam:PF01851 PIR:T39718 RefSeq:NP_596381.1
ProteinModelPortal:O74762 IntAct:O74762 STRING:O74762
EnsemblFungi:SPBC17D11.07c.1 GeneID:2540191 KEGG:spo:SPBC17D11.07c
OrthoDB:EOG4KD9V5 NextBio:20801323 Uniprot:O74762
Length = 965
Score = 223 (83.6 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 42/112 (37%), Positives = 75/112 (66%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ + G+++LLD+ EL+ +L K+ + +D WPE+S+ + KIE+++ED FP+ +LAA
Sbjct: 12 ITSAGGLMALLDEQERELQVHALLKIYEFIDQLWPEISDDVTKIEVMYEDHSFPERELAA 71
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCISLSTYR 112
LV SKVY++LG + ++L +AL +G F ++ Y +T+I K CI + ++
Sbjct: 72 LVVSKVYYYLGEYDEALLFALSSGPKFLHDKNSDYKETLIFK--CIDMFIHK 121
>CGD|CAL0003585 [details] [associations]
symbol:RPN2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0043248 "proteasome assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
CGD:CAL0003585 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AACQ01000070 EMBL:AACQ01000071 eggNOG:COG5116
KO:K03032 Pfam:PF01851 RefSeq:XP_716329.1 RefSeq:XP_716391.1
ProteinModelPortal:Q5A3L0 STRING:Q5A3L0 GeneID:3641945
GeneID:3642027 KEGG:cal:CaO19.12725 KEGG:cal:CaO19.5260
Uniprot:Q5A3L0
Length = 952
Score = 215 (80.7 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 43/106 (40%), Positives = 71/106 (66%)
Query: 3 TVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAALV 62
+ A ++LL +P LK ++L LN +VD W E++ I ++E L+ED F + +LAALV
Sbjct: 5 SAAPYLALLGEPDSTLKSYALSSLNQVVDQLWAEIANNITELEELYEDDSFDRKELAALV 64
Query: 63 ASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYFCISL 108
SKVY++LG F +++YAL AG+ F++ + Y++TI+ + CI+L
Sbjct: 65 ISKVYYNLGDFDAAVKYALYAGNEFNLEEKSQYMETIVSQ--CINL 108
>SGD|S000001337 [details] [associations]
symbol:RPN2 "Subunit of the 26S proteasome" species:4932
"Saccharomyces cerevisiae" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IMP;IPI] [GO:0034515 "proteasome
storage granule" evidence=IDA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0004175 "endopeptidase activity"
evidence=IMP] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043248 "proteasome
assembly" evidence=IGI] [GO:0050790 "regulation of catalytic
activity" evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 SGD:S000001337 INTERPRO:IPR002015 GO:GO:0005634
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:BK006942 GO:GO:0050790 GO:GO:0043248 GO:GO:0006511 EMBL:Z37997
GO:GO:0042176 GO:GO:0034515 GO:GO:0008540 PDB:4B4T PDBsum:4B4T
eggNOG:COG5116 GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403
KO:K03032 OMA:CVENAEL Pfam:PF01851 OrthoDB:EOG4KD9V5 EMBL:L06321
PIR:S48369 RefSeq:NP_012190.1 PDB:4ADY PDBsum:4ADY
ProteinModelPortal:P32565 SMR:P32565 DIP:DIP-4638N IntAct:P32565
MINT:MINT-539880 STRING:P32565 PaxDb:P32565 PeptideAtlas:P32565
EnsemblFungi:YIL075C GeneID:854735 KEGG:sce:YIL075C NextBio:977437
Genevestigator:P32565 GermOnline:YIL075C Uniprot:P32565
Length = 945
Score = 213 (80.0 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 38/102 (37%), Positives = 68/102 (66%)
Query: 1 MNTVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKIEILHEDKGFPQYKLAA 60
+ T A +++LL + +K ++L+ +N++VD W E+S + IE L++D F ++AA
Sbjct: 3 LTTAAPLLALLRENQDSVKTYALESINNVVDQLWSEISNELPDIEALYDDDTFSDREMAA 62
Query: 61 LVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICK 102
L+ASKVY++LG + +++YAL A D FD+ + +V+TI+ K
Sbjct: 63 LIASKVYYNLGEYESAVKYALAAKDRFDIDEKSQFVETIVSK 104
>ASPGD|ASPL0000047917 [details] [associations]
symbol:AN1700 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BN001307 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AACD01000026 InterPro:IPR004155 SMART:SM00567
eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL
Pfam:PF01851 OrthoDB:EOG4KD9V5 RefSeq:XP_659304.1
ProteinModelPortal:Q5BCN0 STRING:Q5BCN0
EnsemblFungi:CADANIAT00008343 GeneID:2874940 KEGG:ani:AN1700.2
Uniprot:Q5BCN0
Length = 1144
Score = 204 (76.9 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 52/126 (41%), Positives = 76/126 (60%)
Query: 3 TVAGVISLLDDPMIELKEFSLKKLNDIVDDFWPEVSEAIQKI----------------EI 46
+ AG++ L +P ELK F+L+ L+ +D W EV +AI +I E
Sbjct: 6 SAAGLVGFLSEPDSELKVFALQTLDSQIDLLWTEVVDAIPQIRRLCGNGYQTNIQFLREA 65
Query: 47 LHEDKGFPQYKLAALVASKVYFHLGSFSDSLQYALGAGDLFDVRNDTVYVKTIICKYF-- 104
L+ED+ FP+ +LAALVA+KVY+HL + +S+ +ALGAG LF++ N + +TII K
Sbjct: 66 LYEDEDFPERELAALVAAKVYYHLQEYHESMVFALGAGKLFNLDNGGEFEETIIAKCVDT 125
Query: 105 CISLST 110
ISLST
Sbjct: 126 FISLST 131
>WB|WBGene00004459 [details] [associations]
symbol:rpn-2 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0005080 "protein kinase C binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0072686 "mitotic
spindle" evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0031965 "nuclear membrane" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0005886 GO:GO:0005938 GO:GO:0008340
GO:GO:0009792 GO:GO:0006915 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0031965
GO:GO:0000003 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GO:GO:0072686 EMBL:FO080630 RefSeq:NP_498346.2 RefSeq:NP_498347.3
ProteinModelPortal:Q18115 SMR:Q18115 IntAct:Q18115 MINT:MINT-210658
STRING:Q18115 PaxDb:Q18115 PRIDE:Q18115 EnsemblMetazoa:C23G10.4b.1
EnsemblMetazoa:C23G10.4b.2 EnsemblMetazoa:C23G10.4b.3 GeneID:175877
KEGG:cel:CELE_C23G10.4 UCSC:C23G10.4a.1 CTD:175877
WormBase:C23G10.4a WormBase:C23G10.4b eggNOG:COG5116
GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403 InParanoid:Q18115
KO:K03032 OMA:CVENAEL NextBio:890112 Pfam:PF01851 Uniprot:Q18115
Length = 965
Score = 126 (49.4 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 40/111 (36%), Positives = 61/111 (54%)
Query: 2 NTVAGVISLLDDPMIEL--KEFSLKKLND--IVDDFWPEVSEAIQKIEILHEDKGFPQYK 57
+ A I +L+ P + K LK ND ++ + W EV++A+ +E L ++ FP++
Sbjct: 16 SNAAAFIRVLESPKSAVTDKVLVLKAFNDWDVLVNTWFEVADALPAVEQLLDNNTFPEHS 75
Query: 58 LAALVASKVYFHLGSFSDSLQYALGAGDLFDV----R----NDTVYVKTII 100
AAL+ SKVYF L + +L++AL GD F+V R ND YV II
Sbjct: 76 SAALLVSKVYFCLEQYERALEFAL-RGD-FNVVPATRTGLGNDAEYVNKII 124
>UNIPROTKB|Q18115 [details] [associations]
symbol:rpn-2 "26S proteasome non-ATPase regulatory subunit
1" species:6239 "Caenorhabditis elegans" [GO:0000502 "proteasome
complex" evidence=NAS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0005886 GO:GO:0005938
GO:GO:0008340 GO:GO:0009792 GO:GO:0006915 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119
GO:GO:0031965 GO:GO:0000003 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GO:GO:0072686 EMBL:FO080630 RefSeq:NP_498346.2
RefSeq:NP_498347.3 ProteinModelPortal:Q18115 SMR:Q18115
IntAct:Q18115 MINT:MINT-210658 STRING:Q18115 PaxDb:Q18115
PRIDE:Q18115 EnsemblMetazoa:C23G10.4b.1 EnsemblMetazoa:C23G10.4b.2
EnsemblMetazoa:C23G10.4b.3 GeneID:175877 KEGG:cel:CELE_C23G10.4
UCSC:C23G10.4a.1 CTD:175877 WormBase:C23G10.4a WormBase:C23G10.4b
eggNOG:COG5116 GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403
InParanoid:Q18115 KO:K03032 OMA:CVENAEL NextBio:890112 Pfam:PF01851
Uniprot:Q18115
Length = 965
Score = 126 (49.4 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 40/111 (36%), Positives = 61/111 (54%)
Query: 2 NTVAGVISLLDDPMIEL--KEFSLKKLND--IVDDFWPEVSEAIQKIEILHEDKGFPQYK 57
+ A I +L+ P + K LK ND ++ + W EV++A+ +E L ++ FP++
Sbjct: 16 SNAAAFIRVLESPKSAVTDKVLVLKAFNDWDVLVNTWFEVADALPAVEQLLDNNTFPEHS 75
Query: 58 LAALVASKVYFHLGSFSDSLQYALGAGDLFDV----R----NDTVYVKTII 100
AAL+ SKVYF L + +L++AL GD F+V R ND YV II
Sbjct: 76 SAALLVSKVYFCLEQYERALEFAL-RGD-FNVVPATRTGLGNDAEYVNKII 124
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 119 119 0.00091 102 3 11 22 0.45 30
29 0.47 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 562 (60 KB)
Total size of DFA: 121 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.39u 0.08s 13.47t Elapsed: 00:00:19
Total cpu time: 13.39u 0.08s 13.47t Elapsed: 00:00:19
Start: Thu Aug 15 14:18:55 2013 End: Thu Aug 15 14:19:14 2013