BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5991
(223 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VH90|TRBID_DROME Ubiquitin thioesterase trabid OS=Drosophila melanogaster GN=trbd
PE=1 SV=1
Length = 778
Score = 258 bits (658), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 152/197 (77%), Gaps = 28/197 (14%)
Query: 31 SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINW 90
+EIE LP IQEQL+DELLD++A Q+QLE P P +NW
Sbjct: 460 AEIEELPIPIQEQLYDELLDRDA-----------------------QKQLETPP-PALNW 495
Query: 91 SHEVTAHL----YALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPR 146
S E+TA L + LWNRSAGDCLLDS MQATWGVFDR+N+LRRALAD+L Q H+F+ R
Sbjct: 496 SLEITARLSSRMFVLWNRSAGDCLLDSAMQATWGVFDRDNILRRALADTLHQCGHVFFTR 555
Query: 147 WKEYEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHILRRPIIVYGV 206
WKEYE + AS+LHF+L++SQ+EEDW++L+SLA QPG++LEQLH+FALAHILRRPIIVYGV
Sbjct: 556 WKEYEMLQASMLHFTLEDSQFEEDWSTLLSLAGQPGSSLEQLHIFALAHILRRPIIVYGV 615
Query: 207 KYVKSFRGEDIGYARFE 223
KYVKSFRGEDIGYARFE
Sbjct: 616 KYVKSFRGEDIGYARFE 632
>sp|Q6NUB7|ZRN1B_XENLA Ubiquitin thioesterase zranb1-B OS=Xenopus laevis GN=zranb1-b PE=2
SV=1
Length = 701
Score = 230 bits (587), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)
Query: 26 FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
F C+F ++IE+LPP++QE+LFDE+LD++ Q++LE E
Sbjct: 363 FACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEE--------------- 407
Query: 76 AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
P+INWS E+ + LYALWNR+AGDCLLDS++QATWG++D+++VLR+A
Sbjct: 408 ---------SPIINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKA 458
Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
L DSL SH FY RWKE+E ++ LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 459 LHDSLRDCSHWFYSRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 518
Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 519 IFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 552
>sp|Q5U595|ZRN1A_XENLA Ubiquitin thioesterase zranb1-A OS=Xenopus laevis GN=zranb1-a PE=2
SV=1
Length = 701
Score = 230 bits (586), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)
Query: 26 FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
F C+F ++IE+LPP++QE+LFDE+LD++ Q++LE E
Sbjct: 363 FACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEE--------------- 407
Query: 76 AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
P+INWS E+ + LYALWNR+AGDCLLDS++QATWG++D+++VLR+A
Sbjct: 408 ---------SPIINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKA 458
Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
L DSL SH FY RWKE+E ++ LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 459 LHDSLHDCSHWFYSRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 518
Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 519 IFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 552
>sp|B1H2Q2|ZRAN1_XENTR Ubiquitin thioesterase zranb1 OS=Xenopus tropicalis GN=zranb1 PE=2
SV=1
Length = 701
Score = 230 bits (586), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)
Query: 26 FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
F C+F ++IE+LPP++QE+LFDE+LD++ Q++LE E
Sbjct: 363 FACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEE--------------- 407
Query: 76 AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
P+INWS E+ + LYALWNR+AGDCLLDS++QATWG++D+++VLR+A
Sbjct: 408 ---------SPIINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKA 458
Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
L DSL SH FY RWKE+E ++ LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 459 LHDSLHDCSHWFYSRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 518
Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 519 IFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 552
>sp|A6QP16|ZRAN1_BOVIN Ubiquitin thioesterase ZRANB1 OS=Bos taurus GN=ZRANB1 PE=2 SV=1
Length = 708
Score = 229 bits (584), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)
Query: 26 FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
F C+F ++IE+LPP++QE+LFDE+LD++ Q++LE E
Sbjct: 370 FACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEE--------------- 414
Query: 76 AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
P+INWS E+ + LYALWNR+AGDCLLDS++QATWG++D+++VLR+A
Sbjct: 415 ---------SPIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKA 465
Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
L DSL SH FY RWK++E ++ LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 466 LHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 525
Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 526 IFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 559
>sp|Q7M760|ZRAN1_MOUSE Ubiquitin thioesterase Zranb1 OS=Mus musculus GN=Zranb1 PE=2 SV=1
Length = 708
Score = 229 bits (584), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)
Query: 26 FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
F C+F ++IE+LPP++QE+LFDE+LD++ Q++LE E
Sbjct: 370 FACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEE--------------- 414
Query: 76 AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
P+INWS E+ + LYALWNR+AGDCLLDS++QATWG++D+++VLR+A
Sbjct: 415 ---------SPIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKA 465
Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
L DSL SH FY RWK++E ++ LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 466 LHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 525
Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 526 IFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 559
>sp|Q9UGI0|ZRAN1_HUMAN Ubiquitin thioesterase ZRANB1 OS=Homo sapiens GN=ZRANB1 PE=1 SV=2
Length = 708
Score = 229 bits (584), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)
Query: 26 FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
F C+F ++IE+LPP++QE+LFDE+LD++ Q++LE E
Sbjct: 370 FACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEE--------------- 414
Query: 76 AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
P+INWS E+ + LYALWNR+AGDCLLDS++QATWG++D+++VLR+A
Sbjct: 415 ---------SPIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKA 465
Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
L DSL SH FY RWK++E ++ LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 466 LHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 525
Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
+F LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 526 IFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 559
>sp|A0JMQ9|ZRN1B_DANRE Ubiquitin thioesterase zranb1-B OS=Danio rerio GN=zranb1b PE=2 SV=1
Length = 716
Score = 228 bits (582), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 149/214 (69%), Gaps = 40/214 (18%)
Query: 26 FVCFF----------SEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKE 75
F C+F ++IE+LPP++QE+LFDE+LD++ Q++LE E
Sbjct: 378 FPCYFFTDLVTFTLPADIEDLPPNVQEKLFDEVLDRDVQKELEEE--------------- 422
Query: 76 AQQQLEAEPHPVINWSHEVT----AHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRA 131
P+INWS E+ + LYALWNR+AGDCLLDS++QATWG++D+++VLR++
Sbjct: 423 ---------SPIINWSLELGTRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKS 473
Query: 132 LADSLAQASHLFYPRWKEYEDMHASL--LHFSLDESQWEEDWASLVSLASQPGAALEQLH 189
L DSL SH FY RWKE+E ++ LHFSL E QW+EDWA ++SLASQPGA+LEQ H
Sbjct: 474 LNDSLHDCSHWFYTRWKEWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTH 533
Query: 190 VFALAHILRRPIIVYGVKYVKSFRGEDIGYARFE 223
VF LAHILRRPIIVYGVKY KSFRGE +GY RF+
Sbjct: 534 VFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQ 567
>sp|Q60769|TNAP3_MOUSE Tumor necrosis factor alpha-induced protein 3 OS=Mus musculus
GN=Tnfaip3 PE=1 SV=2
Length = 775
Score = 82.0 bits (201), Expect = 3e-15, Method: Composition-based stats.
Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 21/157 (13%)
Query: 71 LLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRR 130
L+D+ Q LE++ +NW EV L AL G+CL+ + Q WGV D + VLR+
Sbjct: 68 LIDRSVQASLESQKK--LNWCREVR-KLVALKTNGDGNCLMHAACQYMWGVQDTDLVLRK 124
Query: 131 ALADSLAQA-SHLFYPRW-----KEYEDMHASLLHFSLDESQWEEDWASLVSLAS--QPG 182
AL +L + + F RW K E + L + D W ++W +LV +AS P
Sbjct: 125 ALCSTLKETDTRNFKFRWQLESLKSQEFVETGLCY---DTRNWNDEWDNLVKMASADTPA 181
Query: 183 A-------ALEQLHVFALAHILRRPIIVYGVKYVKSF 212
A +LE++H+F L++ILRRPIIV K ++S
Sbjct: 182 ARSGLQYNSLEEIHIFVLSNILRRPIIVISDKMLRSL 218
>sp|Q4R8W3|TNAP3_MACFA Tumor necrosis factor alpha-induced protein 3 OS=Macaca
fascicularis GN=TNFAIP3 PE=2 SV=1
Length = 790
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 21/157 (13%)
Query: 71 LLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRR 130
L+DK Q LE++ +NW EV L AL G+CL+ + Q WGV D + VLR+
Sbjct: 68 LIDKNIQASLESQKK--LNWCREVR-KLVALKTNGDGNCLMHATSQYMWGVQDTDLVLRK 124
Query: 131 ALADSLAQA-SHLFYPRW-----KEYEDMHASLLHFSLDESQWEEDWASLVSLASQ--PG 182
AL +L + + F RW K E + L + D W ++W +L+ +AS P
Sbjct: 125 ALFSTLKETDTRNFKFRWQLESLKSQEFVETGLCY---DTRNWNDEWDNLIKMASTDTPM 181
Query: 183 A-------ALEQLHVFALAHILRRPIIVYGVKYVKSF 212
A +LE++H+F L +ILRRPIIV K ++S
Sbjct: 182 ARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSL 218
>sp|P21580|TNAP3_HUMAN Tumor necrosis factor alpha-induced protein 3 OS=Homo sapiens
GN=TNFAIP3 PE=1 SV=1
Length = 790
Score = 78.6 bits (192), Expect = 4e-14, Method: Composition-based stats.
Identities = 55/157 (35%), Positives = 82/157 (52%), Gaps = 21/157 (13%)
Query: 71 LLDKEAQQQLEAEPHPVINWSHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRR 130
L+D+ Q LE++ +NW EV L AL G+CL+ + Q WGV D + VLR+
Sbjct: 68 LIDRNIQATLESQKK--LNWCREVRK-LVALKTNGDGNCLMHATSQYMWGVQDTDLVLRK 124
Query: 131 ALADSLAQA-SHLFYPRW-----KEYEDMHASLLHFSLDESQWEEDWASLVSLASQ--PG 182
AL +L + + F RW K E + L + D W ++W +L+ +AS P
Sbjct: 125 ALFSTLKETDTRNFKFRWQLESLKSQEFVETGLCY---DTRNWNDEWDNLIKMASTDTPM 181
Query: 183 A-------ALEQLHVFALAHILRRPIIVYGVKYVKSF 212
A +LE++H+F L +ILRRPIIV K ++S
Sbjct: 182 ARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSL 218
>sp|B2RUR8|OTU7B_MOUSE OTU domain-containing protein 7B OS=Mus musculus GN=Otud7b PE=1
SV=1
Length = 840
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 31/157 (19%)
Query: 88 INW--SHEVTAH-LYALWNRSAGDCLLDSLMQATWGVFDRENVLRRAL----ADSLAQAS 140
+NW S + T L L G+CLL + WG DR+ VLR+AL + + +
Sbjct: 170 LNWWVSMDSTCQRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKALYALMEKGVEKEA 229
Query: 141 HLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVSLAS-QP-------GAA-------- 184
RW++ + S L ++ DE W+++W L+ LAS +P GA+
Sbjct: 230 LRRRWRWQQTQQNKESGLVYTEDE--WQKEWNELIKLASSEPRMHLGSNGASGGGVESSE 287
Query: 185 ------LEQLHVFALAHILRRPIIVYGVKYVKSFRGE 215
LE+ HVF LAH+L+RPI+V ++ GE
Sbjct: 288 EPVYESLEEFHVFVLAHVLKRPIVVVADTMLRDSGGE 324
>sp|Q6GQQ9|OTU7B_HUMAN OTU domain-containing protein 7B OS=Homo sapiens GN=OTUD7B PE=1
SV=1
Length = 843
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 31/157 (19%)
Query: 88 INW---SHEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRAL----ADSLAQAS 140
+NW + L L G+CLL + WG DR+ +LR+AL + + +
Sbjct: 170 LNWWVSVDPTSQRLLPLATTGDGNCLLHAASLGMWGFHDRDLMLRKALYALMEKGVEKEA 229
Query: 141 HLFYPRWKEYEDMHASLLHFSLDESQWEEDWASLVSLAS-QP-------GA--------- 183
RW++ + S L ++ DE W+++W L+ LAS +P GA
Sbjct: 230 LKRRWRWQQTQQNKESGLVYTEDE--WQKEWNELIKLASSEPRMHLGTNGANCGGVESSE 287
Query: 184 -----ALEQLHVFALAHILRRPIIVYGVKYVKSFRGE 215
+LE+ HVF LAH+LRRPI+V ++ GE
Sbjct: 288 EPVYESLEEFHVFVLAHVLRRPIVVVADTMLRDSGGE 324
>sp|Q8R554|OTU7A_MOUSE OTU domain-containing protein 7A OS=Mus musculus GN=Otud7a PE=2
SV=1
Length = 926
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 62/146 (42%), Gaps = 20/146 (13%)
Query: 90 WSHEVTA--HLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASH--LFYP 145
WS T+ L L G+CLL + WG DR+ VLR+AL + +
Sbjct: 191 WSTVCTSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKALYTMMRTGAEREALKR 250
Query: 146 RWK----------EYEDMHASLLHFSLDE-----SQWEEDWASLVSLASQPG-AALEQLH 189
RW+ E+E LL + E S+ V + P +LE+ H
Sbjct: 251 RWRWQQTQQNKEEEWEREWTELLKLASSEPRTHFSKNGSGTGGGVDNSEDPVYESLEEFH 310
Query: 190 VFALAHILRRPIIVYGVKYVKSFRGE 215
VF LAHILRRPI+V ++ GE
Sbjct: 311 VFVLAHILRRPIVVVADTMLRDSGGE 336
>sp|Q8TE49|OTU7A_HUMAN OTU domain-containing protein 7A OS=Homo sapiens GN=OTUD7A PE=1
SV=1
Length = 926
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 61/145 (42%), Gaps = 19/145 (13%)
Query: 90 WSHEVTA--HLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASH--LFYP 145
WS T+ L L G+CLL + WG DR+ VLR+AL + +
Sbjct: 189 WSTVCTSCKRLLPLATTGDGNCLLHAASLGMWGFHDRDLVLRKALYTMMRTGAEREALKR 248
Query: 146 RWK----------EYEDMHASLLHFSLDESQW----EEDWASLVSLASQPG-AALEQLHV 190
RW+ E+E LL + E + V + P +LE+ HV
Sbjct: 249 RWRWQQTQQNKEEEWEREWTELLKLASSEPRTHFSKNGGTGGGVDNSEDPVYESLEEFHV 308
Query: 191 FALAHILRRPIIVYGVKYVKSFRGE 215
F LAHILRRPI+V ++ GE
Sbjct: 309 FVLAHILRRPIVVVADTMLRDSGGE 333
>sp|Q8CF97|VCIP1_RAT Deubiquitinating protein VCIP135 OS=Rattus norvegicus GN=Vcpip1
PE=1 SV=2
Length = 1221
Score = 36.6 bits (83), Expect = 0.14, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 107 GDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQ 166
G CL+ ++ +A G RE + AL ++L Q ++++ + +L H +D ++
Sbjct: 216 GHCLVHAVSRALVG---RE-LFWHALRENLKQ-------HFQQHLARYQALFHDFIDAAE 264
Query: 167 WEEDWASLVSLASQPGA---ALEQLHVFALAHILRRPIIV 203
WE+ L P L +H+F LA++L RPII+
Sbjct: 265 WEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIIL 304
>sp|Q96JH7|VCIP1_HUMAN Deubiquitinating protein VCIP135 OS=Homo sapiens GN=VCPIP1 PE=1
SV=2
Length = 1222
Score = 36.6 bits (83), Expect = 0.14, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 107 GDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQ 166
G CL+ ++ +A G RE + AL ++L Q ++++ + +L H +D ++
Sbjct: 217 GHCLVHAVSRALVG---RE-LFWHALRENLKQ-------HFQQHLARYQALFHDFIDAAE 265
Query: 167 WEEDWASLVSLASQPGA---ALEQLHVFALAHILRRPIIV 203
WE+ L P L +H+F LA++L RPII+
Sbjct: 266 WEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIIL 305
>sp|Q8CDG3|VCIP1_MOUSE Deubiquitinating protein VCIP135 OS=Mus musculus GN=Vcpip1 PE=2
SV=1
Length = 1220
Score = 36.6 bits (83), Expect = 0.16, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 107 GDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRWKEYEDMHASLLHFSLDESQ 166
G CL+ ++ +A G RE + AL ++L Q ++++ + +L H +D ++
Sbjct: 216 GHCLVHAVSRALVG---RE-LFWHALRENLKQ-------HFQQHLARYQALFHDFIDAAE 264
Query: 167 WEEDWASLVSLASQPGA---ALEQLHVFALAHILRRPIIV 203
WE+ L P L +H+F LA++L RPII+
Sbjct: 265 WEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIIL 304
>sp|A2R4R1|CD123_ASPNC Cell division cycle protein 123 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=cdc123 PE=3 SV=1
Length = 371
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 7/113 (6%)
Query: 5 WLNHYRRLQTKTSISRLTSKYFVCFFSEIENLPPSIQEQLFDELLDKEAQQQLEAEPHPV 64
W YR L K+ RLT+ + ++ LPP D+ LD + + EP P
Sbjct: 41 WQPRYRTLVPKSRAIRLTAPFVKYLRADGIVLPPEAAPPTDDDNLDTFSDDGADEEPDPS 100
Query: 65 INWS--HELLDKEAQQQLEAEPHPVINWSHEVTAHLYALWN----RSAGDCLL 111
+ W H + K + + P +NWS A + N R+A D L
Sbjct: 101 VEWPEIHNQI-KSTITEYGGKVTPKLNWSAPKDATWMSATNDTQCRTANDIYL 152
>sp|A4S1G4|FEN1_OSTLU Flap endonuclease 1 OS=Ostreococcus lucimarinus (strain CCE9901)
GN=FEN1 PE=3 SV=1
Length = 389
Score = 34.3 bits (77), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 16/91 (17%)
Query: 34 ENLPPSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEAEPHPVINWSHE 93
+N P +I+EQ F+ LD+ ++A H I ++ ++ +QQL N + E
Sbjct: 12 DNAPGAIKEQKFESYLDRRV--AIDASMH--IYQFMMVVGRQGEQQL-------TNEAGE 60
Query: 94 VTAHLYALWNRSAGDC-LLDSLMQATWGVFD 123
VT+HL + NR+ C +L++ ++ + VFD
Sbjct: 61 VTSHLQGMLNRT---CRMLEAGIKPIY-VFD 87
>sp|A7RFT2|CD123_NEMVE Cell division cycle protein 123 homolog OS=Nematostella vectensis
GN=cdc123 PE=3 SV=1
Length = 329
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 5 WLNHYRRLQTKTSISRLTSKYFVCFFSEIENLP--PSIQEQLFDELLDKEAQQQLEAEPH 62
W ++ + ++ I L+ ++ ++ LP PS + D+ D E Q LE +P
Sbjct: 14 WYPRFKNVTIRSKIIPLSKEFVDYLKTDGVVLPGKPSSLPRHEDDESDSEEWQNLEEDPE 73
Query: 63 PVINWSHELLD-----KEAQQQLEAEPHPVINWSHEVTA----HLYALWNRSAGDCLLDS 113
+ E D KEA Q+L E P +NWS A H L +S GD L
Sbjct: 74 QATVEAPEFNDIDTKIKEAIQELGGEVFPKLNWSAPRDASWISHDNTLRCKSPGDIYL-- 131
Query: 114 LMQATWGVFDRENVLRRALADSL 136
L++++ + + R L D+
Sbjct: 132 LLKSS-------DTIDRVLCDAF 147
>sp|Q17938|DAF36_CAEEL Cholesterol desaturase daf-36 OS=Caenorhabditis elegans GN=daf-36
PE=1 SV=2
Length = 428
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 92 HEVTAHLYALWNRSAGDCLLDSLMQATWGVFDRENVLRRALADSLAQASHLFYPRW--KE 149
HEV H+ + A L+ L ++ V ++++ L+D H++ +W K
Sbjct: 219 HEVMCHIQEIPENGADIAHLNYLHKSAPPVTKGSDIIKTDLSDPQPAVQHVWDGKWEVKS 278
Query: 150 YEDMHASLLHFSLDESQWEEDWASLVSLASQPGAALEQLHVFALAHIL 197
ED H ++H +Q+ W V L S A + H + H+L
Sbjct: 279 EEDRHCGVMHL----NQFMTFWGYKVPLTSSKLVA--EQHGPGIVHML 320
>sp|Q2U988|CD123_ASPOR Cell division cycle protein 123 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=cdc123 PE=3 SV=1
Length = 413
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 7/114 (6%)
Query: 4 EWLNHYRRLQTKTSISRLTSKYFVCFFSEIENLPPSIQEQLFDELLDKEAQQQLEAEPHP 63
+W YR L K+ + LT + ++ LPP D+ LD + + + +P P
Sbjct: 39 DWQPRYRALTPKSRLIPLTVPFISYLRADGIVLPPENATPTDDDNLDTYSDDEADEQPDP 98
Query: 64 VINWS--HELLDKEAQQQLEAEPHPVINWSHEVTAHLYALWN----RSAGDCLL 111
W H + K +L P +NWS A A N R+ D L
Sbjct: 99 STEWEEIHTQI-KTTISELGGIITPKLNWSAPKDATWMAATNDMQCRTPNDIYL 151
>sp|Q96RT1|LAP2_HUMAN Protein LAP2 OS=Homo sapiens GN=ERBB2IP PE=1 SV=2
Length = 1412
Score = 31.2 bits (69), Expect = 5.8, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 30 FSEIENLP-------PSIQEQLFDELLDKEAQQQLEAEPHPVINWSHELLDKEAQQQLEA 82
+S+I + P PS +EQL D L+ K A Q +PH HEL +E + ++E
Sbjct: 1270 YSQIHHPPQASVARHPS-REQLIDYLMLKVAHQPPYTQPHCSPRQGHELAKQEIRVRVEK 1328
Query: 83 EP 84
+P
Sbjct: 1329 DP 1330
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,466,995
Number of Sequences: 539616
Number of extensions: 3378745
Number of successful extensions: 9250
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 9168
Number of HSP's gapped (non-prelim): 48
length of query: 223
length of database: 191,569,459
effective HSP length: 113
effective length of query: 110
effective length of database: 130,592,851
effective search space: 14365213610
effective search space used: 14365213610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)