Query psy6
Match_columns 66
No_of_seqs 133 out of 1041
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 23:59:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h7c_A Liver carboxylesterase 99.4 1.7E-13 5.8E-18 91.9 5.6 48 13-66 441-488 (542)
2 3bix_A Neuroligin-1, neuroligi 99.4 2.8E-13 9.6E-18 91.4 6.1 54 13-66 447-500 (574)
3 2bce_A Cholesterol esterase; h 99.4 9.8E-14 3.3E-18 93.9 3.0 48 14-66 428-475 (579)
4 1p0i_A Cholinesterase; serine 99.4 3.3E-13 1.1E-17 90.2 4.7 48 14-66 431-478 (529)
5 1ea5_A ACHE, acetylcholinester 99.4 2.8E-13 9.6E-18 90.8 4.0 48 14-66 433-480 (537)
6 2ha2_A ACHE, acetylcholinester 99.4 3.6E-13 1.2E-17 90.3 4.0 48 14-66 440-487 (543)
7 1dx4_A ACHE, acetylcholinester 99.4 4.9E-13 1.7E-17 90.4 4.6 48 14-66 473-520 (585)
8 2fj0_A JuvenIle hormone estera 99.4 8.2E-13 2.8E-17 88.8 5.2 52 14-66 442-493 (551)
9 1ukc_A ESTA, esterase; fungi, 99.2 4.5E-12 1.5E-16 84.8 2.8 50 16-66 419-468 (522)
10 1qe3_A PNB esterase, para-nitr 99.2 1.2E-11 4.1E-16 82.1 4.7 48 18-66 396-443 (489)
11 2ogt_A Thermostable carboxyles 99.2 1E-11 3.5E-16 82.6 4.4 50 16-66 404-453 (498)
12 1thg_A Lipase; hydrolase(carbo 98.9 4.1E-10 1.4E-14 75.7 3.4 36 15-66 457-492 (544)
13 1llf_A Lipase 3; candida cylin 98.8 1.4E-09 4.7E-14 73.0 3.0 36 15-66 443-478 (534)
14 1nwd_B GAD, glutamate decarbox 62.7 7.3 0.00025 15.7 2.6 17 48-64 7-23 (28)
15 3c0t_B Mediator of RNA polymer 38.4 18 0.00063 15.0 1.4 15 52-66 6-20 (33)
16 2ad6_B Methanol dehydrogenase 23.0 80 0.0027 15.6 2.9 17 50-66 46-62 (69)
17 1w6s_B Methanol dehydrogenase 21.4 90 0.0031 15.6 2.9 17 50-66 46-62 (74)
18 1t6a_A Rbstp2229 gene product; 20.9 25 0.00085 19.5 0.3 14 8-23 81-94 (126)
No 1
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=99.43 E-value=1.7e-13 Score=91.86 Aligned_cols=48 Identities=35% Similarity=0.567 Sum_probs=41.2
Q ss_pred CCCCCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6 13 LFQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 13 ~p~~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G 66 (66)
.|.+.||+|++||+|+||++... ...+++|++++++|+++|+||||+|
T Consensus 441 ~~~~~Ga~H~~el~yvFg~~~~~------~~~~~~~~~ls~~m~~~W~nFaktG 488 (542)
T 2h7c_A 441 KPKTVIGDHGDELFSVFGAPFLK------EGASEEEIRLSKMVMKFWANFARNG 488 (542)
T ss_dssp SCTTCCSBTTTTHHHHTTGGGTS------SCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCcccccchHHhhCCcccc------CCCCcHHHHHHHHHHHHHHHHHhhC
Confidence 45678999999999999986531 3468899999999999999999987
No 2
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=99.42 E-value=2.8e-13 Score=91.43 Aligned_cols=54 Identities=37% Similarity=0.811 Sum_probs=41.8
Q ss_pred CCCCCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6 13 LFQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 13 ~p~~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G 66 (66)
.|.+.||+|++||+|+||++............+++|++++++|+++|+||||+|
T Consensus 447 ~~~~~Ga~H~~el~yvFg~~~~~~~~~~~~~~~~~d~~ls~~m~~~W~nFAktG 500 (574)
T 3bix_A 447 VPAWADAAHGDEVPYVLGIPMIGPTELFPCNFSKNDVMLSAVVMTYWTNFAKTG 500 (574)
T ss_dssp SCTTCCSCTTTTHHHHTTGGGGCCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCcCccchHHHcCCCcccccccccCCCChHHHHHHHHHHHHHHHHhCcC
Confidence 345689999999999999865422111123458899999999999999999987
No 3
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=99.40 E-value=9.8e-14 Score=93.93 Aligned_cols=48 Identities=31% Similarity=0.683 Sum_probs=40.3
Q ss_pred CCCCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6 14 FQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 14 p~~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G 66 (66)
|.+.||+|++||+|+||.+... ....+++|++|+++|+++|+||||+|
T Consensus 428 ~~~~Ga~H~~El~yvFg~~~~~-----~~~~~~~d~~ls~~m~~~W~nFAktG 475 (579)
T 2bce_A 428 PKWMGADHADDLQYVFGKPFAT-----PLGYRAQDRTVSKAMIAYWTNFARTG 475 (579)
T ss_dssp CTTCCCBTTTTHHHHTTHHHHS-----GGGCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccccchhhHHHHHhCCcccc-----cCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 4678999999999999976432 12457889999999999999999987
No 4
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=99.38 E-value=3.3e-13 Score=90.20 Aligned_cols=48 Identities=33% Similarity=0.570 Sum_probs=39.7
Q ss_pred CCCCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6 14 FQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 14 p~~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G 66 (66)
|.+.||+|++||+|+||.+... ....+++|++++++|+++|+||||+|
T Consensus 431 ~~~~Ga~H~~el~yvFg~~~~~-----~~~~t~~~~~ls~~m~~~W~nFaktG 478 (529)
T 1p0i_A 431 PEWMGVMHGYEIEFVFGLPLER-----RDQYTKAEEILSRSIVKRWANFAKYG 478 (529)
T ss_dssp CGGGCSBTTTTHHHHTTGGGCT-----TC-CCHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccCcCccchhHHhcCCCccc-----cCCCCHHHHHHHHHHHHHHHHHhccC
Confidence 4567999999999999975432 13457899999999999999999987
No 5
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=99.37 E-value=2.8e-13 Score=90.79 Aligned_cols=48 Identities=40% Similarity=0.692 Sum_probs=40.3
Q ss_pred CCCCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6 14 FQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 14 p~~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G 66 (66)
+.+.||+|++||+|+||++... ....+++|++++++|+++|+||||+|
T Consensus 433 ~~~~Ga~H~~el~yvFg~~~~~-----~~~~~~~d~~ls~~m~~~W~nFaktG 480 (537)
T 1ea5_A 433 PEWMGVIHGYEIEFVFGLPLVK-----ELNYTAEEEALSRRIMHYWATFAKTG 480 (537)
T ss_dssp CGGGCSBTTTTHHHHTTGGGCG-----GGCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCcCCccchhhhHHHcCCcccc-----ccCCChHHHHHHHHHHHHHHHhcccC
Confidence 4567999999999999976532 12457889999999999999999987
No 6
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=99.36 E-value=3.6e-13 Score=90.32 Aligned_cols=48 Identities=40% Similarity=0.632 Sum_probs=40.1
Q ss_pred CCCCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6 14 FQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 14 p~~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G 66 (66)
|.+.||+|++||+|+||.+... ....+++|++++++|+++|+||||+|
T Consensus 440 ~~~~Ga~H~~el~yvFg~~~~~-----~~~~t~~~~~ls~~m~~~W~nFaktG 487 (543)
T 2ha2_A 440 PLWMGVPHGYEIEFIFGLPLDP-----SLNYTTEERIFAQRLMKYWTNFARTG 487 (543)
T ss_dssp CGGGCSBTTTTHHHHTTGGGCG-----GGCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccCccccchhhHhhCCcccc-----cCCCCHHHHHHHHHHHHHHHHHhhcC
Confidence 4567999999999999976432 13457899999999999999999987
No 7
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=99.36 E-value=4.9e-13 Score=90.41 Aligned_cols=48 Identities=29% Similarity=0.605 Sum_probs=40.2
Q ss_pred CCCCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6 14 FQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 14 p~~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G 66 (66)
+.+.||+|++||+|+||++... ....+++|++|+++|+++|+||||+|
T Consensus 473 ~~~~Ga~H~~el~yvFg~~~~~-----~~~~~~~e~~ls~~m~~~W~nFAktG 520 (585)
T 1dx4_A 473 GEWMGVLHGDEIEYFFGQPLNN-----SLQYRPVERELGKRMLSAVIEFAKTG 520 (585)
T ss_dssp CGGGCSBTTHHHHHHTTGGGCT-----TSCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCccCccccCccHHhcCCcccc-----cCCCCcHHHHHHHHHHHHHHHHhccC
Confidence 3457999999999999976532 23567889999999999999999987
No 8
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=99.35 E-value=8.2e-13 Score=88.77 Aligned_cols=52 Identities=15% Similarity=0.261 Sum_probs=40.1
Q ss_pred CCCCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6 14 FQRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 14 p~~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G 66 (66)
+.+.||+|++||+|+|+++...... .....+++|++|+++|+++|+||||+|
T Consensus 442 ~~~~Ga~H~~el~yvFg~~~~~~~~-~~~~~~~~d~~ls~~m~~~W~nFAktG 493 (551)
T 2fj0_A 442 LNFEGAGHIEDLTYVFRTNSMLGGH-ASFPPHDKDDHMKYWMTSFITNFMKYS 493 (551)
T ss_dssp CCCSSCCTTTGGGGTSBCTTTCCSC-CCSSCCSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCcccccceeeecCCchhcccc-cCCCCChHHHHHHHHHHHHHHHHHhhC
Confidence 3468999999999999986541000 012447788999999999999999987
No 9
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.21 E-value=4.5e-12 Score=84.75 Aligned_cols=50 Identities=28% Similarity=0.380 Sum_probs=37.4
Q ss_pred CCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6 16 RQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 16 ~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G 66 (66)
..||+|++||+|+|++...... ......+++|++++++|+++|+||||+|
T Consensus 419 ~~Ga~H~~el~yvFg~~~~~~~-~~~~~~~~~d~~ls~~m~~~W~nFaktG 468 (522)
T 1ukc_A 419 GIGVPHTFELPAIFGAGSTGTL-SSDSSYLTYNAAIIPVTMHYFISFVQTL 468 (522)
T ss_dssp TCCSBTTTTHHHHHCTTTTSCC-CTTCGGGTTTTTHHHHHHHHHHHHHHHS
T ss_pred CCCCcchhhHHHhcCCcccccc-cCccCCChHHHHHHHHHHHHHHHHhhhC
Confidence 5799999999999997653210 0011224457899999999999999987
No 10
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.21 E-value=1.2e-11 Score=82.11 Aligned_cols=48 Identities=25% Similarity=0.250 Sum_probs=36.5
Q ss_pred CCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6 18 GCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 18 Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G 66 (66)
||+|++||+|+||+........ ....+++|++++++|+++|+||||+|
T Consensus 396 ga~H~~dl~yvFg~~~~~~~~~-~~~~~~~~~~ls~~m~~~w~~Fa~~G 443 (489)
T 1qe3_A 396 KAFHALELPFVFGNLDGLERMA-KAEITDEVKQLSHTIQSAWITFAKTG 443 (489)
T ss_dssp SCCTTTTHHHHHTCCTTC--------CCHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCccccchhhhcCCcccccccc-ccCCCHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999865320000 02246788999999999999999987
No 11
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=99.21 E-value=1e-11 Score=82.56 Aligned_cols=50 Identities=18% Similarity=0.219 Sum_probs=35.0
Q ss_pred CCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6 16 RQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 16 ~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G 66 (66)
..||+|++||+|+|++....... .....+++|++++++|+++|+||||+|
T Consensus 404 ~~Ga~H~~el~yvFg~~~~~~~~-~~~~~~~~d~~ls~~m~~~w~nFak~G 453 (498)
T 2ogt_A 404 QLKACHALELPFVFHNLHQPGVA-NFVGNRPEREAIANEMHYAWLSFARTG 453 (498)
T ss_dssp ----CCCCCHHHHHTCTTSTTSC-CCSSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCcccccchhhhcCCccccccc-cccCCCHHHHHHHHHHHHHHHHHhccC
Confidence 36999999999999986532000 011235678999999999999999987
No 12
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=98.95 E-value=4.1e-10 Score=75.66 Aligned_cols=36 Identities=22% Similarity=0.409 Sum_probs=31.0
Q ss_pred CCCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6 15 QRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 15 ~~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G 66 (66)
++.||+|++||+|+|+.+ .+++++|+++|+||||+|
T Consensus 457 ~~~Ga~H~~el~yvF~~~----------------~~ls~~m~~~w~~Fa~tG 492 (544)
T 1thg_A 457 PFLGTFHGNELIFQFNVN----------------IGPANSYLRYFISFANHH 492 (544)
T ss_dssp TTTSSBTTTTHHHHHTCC----------------CTTHHHHHHHHHHHHHHS
T ss_pred CCCCceecccHHHHhcCH----------------HHHHHHHHHHHHHHHhhC
Confidence 467999999999999421 169999999999999987
No 13
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=98.84 E-value=1.4e-09 Score=72.98 Aligned_cols=36 Identities=8% Similarity=-0.034 Sum_probs=29.9
Q ss_pred CCCCCCccccHHHhcCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhhcC
Q psy6 15 QRQGCVQGEELPYMFGAPLVGGMGYFPKNYTKPEIQLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 15 ~~~Ga~H~~dl~yifg~~~~~~~~~~~~~~~~~d~~ls~~m~~~w~~Fak~G 66 (66)
++.||+|++||+|+|+.+ . .+++.|+++|+||||+|
T Consensus 443 ~~~Ga~H~~el~yvF~~~---------~-------~~s~~m~~~W~nFaktG 478 (534)
T 1llf_A 443 PIMGTFHANDIVWQDYLL---------G-------SGSVIYNNAFIAFATDL 478 (534)
T ss_dssp TTTSSBTTHHHHHHHTCC---------C-------TTHHHHTHHHHHHHHHS
T ss_pred CCCCeeccchhHHHhCCc---------h-------HHHHHHHHHHHHHhccC
Confidence 478999999999999421 1 26789999999999987
No 14
>1nwd_B GAD, glutamate decarboxylase; calmodulin-peptide complex, calmodulin, dimer, binding protein/hydrolase comple; NMR {Petunia x hybrida}
Probab=62.71 E-value=7.3 Score=15.71 Aligned_cols=17 Identities=18% Similarity=0.323 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy6 48 EIQLSEMLMTYLSNFVR 64 (66)
Q Consensus 48 d~~ls~~m~~~w~~Fak 64 (66)
|.++.-.|+..|-.|+.
T Consensus 7 dsevqlemitawkkfve 23 (28)
T 1nwd_B 7 DSEVQLEMITAWKKFVE 23 (28)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 33455589999999975
No 15
>3c0t_B Mediator of RNA polymerase II transcription subunit 8; beta barrel, channel, protein-protein complex, activator, nucleus; 2.40A {Schizosaccharomyces pombe}
Probab=38.44 E-value=18 Score=15.02 Aligned_cols=15 Identities=20% Similarity=0.607 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHhhcC
Q psy6 52 SEMLMTYLSNFVRTG 66 (66)
Q Consensus 52 s~~m~~~w~~Fak~G 66 (66)
+.+|..-+.+|.|.|
T Consensus 6 anqmltdilsfmksg 20 (33)
T 3c0t_B 6 ANQMLTDILSFMKSG 20 (33)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcc
Confidence 456777778888876
No 16
>2ad6_B Methanol dehydrogenase subunit 2; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: a.137.2.1 PDB: 1g72_B* 2ad7_B* 2ad8_B* 4aah_B*
Probab=23.00 E-value=80 Score=15.56 Aligned_cols=17 Identities=12% Similarity=0.151 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHhhcC
Q psy6 50 QLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 50 ~ls~~m~~~w~~Fak~G 66 (66)
.|-++=...+.+|.+||
T Consensus 46 ame~RN~kRv~~fkkTG 62 (69)
T 2ad6_B 46 AMDARNAKRIANAKSSG 62 (69)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 45555567899999987
No 17
>1w6s_B Methanol dehydrogenase subunit 2; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: a.137.2.1 PDB: 1h4j_B* 1h4i_B* 2d0v_B*
Probab=21.45 E-value=90 Score=15.58 Aligned_cols=17 Identities=35% Similarity=0.479 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHhhcC
Q psy6 50 QLSEMLMTYLSNFVRTG 66 (66)
Q Consensus 50 ~ls~~m~~~w~~Fak~G 66 (66)
.|-.+=...+.+|.+||
T Consensus 46 ame~RN~kRv~~fkkTG 62 (74)
T 1w6s_B 46 QMEERNKKRVENFKKTG 62 (74)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 45555567899999987
No 18
>1t6a_A Rbstp2229 gene product; structural genomics, hypothetical protein, PSI, protein structure initiative; HET: MSE; 2.05A {Geobacillus stearothermophilus} SCOP: d.129.8.1
Probab=20.88 E-value=25 Score=19.55 Aligned_cols=14 Identities=29% Similarity=0.565 Sum_probs=7.9
Q ss_pred cccccCCCCCCCCccc
Q psy6 8 FFIVLLFQRQGCVQGE 23 (66)
Q Consensus 8 ~~~~~~p~~~Ga~H~~ 23 (66)
+++...|+ +|+|||
T Consensus 81 fIQi~LP~--~AThGD 94 (126)
T 1t6a_A 81 FIDIALPP--GATHGD 94 (126)
T ss_dssp EEEEECCT--TCCHHH
T ss_pred eEEEECCC--CCCcCc
Confidence 44555554 567765
Done!