RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6001
(327 letters)
>d1hd7a_ d.151.1.1 (A:) DNA repair endonuclease Hap1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 275
Score = 148 bits (374), Expect = 2e-43
Identities = 115/268 (42%), Positives = 164/268 (61%), Gaps = 9/268 (3%)
Query: 64 SRKPYTTKVKVSTWNVNGLRACVKKNACVEYILEENPDIMALQQIRCQEDEVPESFRKSL 123
S KP T +K+ +WNV+GLRA +KK ++++ EE PDI+ LQ+ +C E+++P ++
Sbjct: 13 SGKPAT--LKICSWNVDGLRAWIKKKG-LDWVKEEAPDILCLQETKCSENKLPAELQELP 69
Query: 124 SHYHMFWIGS--DKGQGGVGLLTKEKPLTVKYGIPGVSN-QRGRVITAKFKRFTFITVYV 180
H +W +G GVGLL+++ PL V YGI + Q GRVI A+F F +T YV
Sbjct: 70 GLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYV 129
Query: 181 PNSGIKLKAIDFRMIWDQHFYDYIQSELRSNSNIIISGDLNVCLQSIDLANPDKNVKTAG 240
PN+G L +++R WD+ F +++ S +++ GDLNV + IDL NP N K AG
Sbjct: 130 PNAGRGLVRLEYRQRWDEAFRKFLKGL-ASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAG 188
Query: 241 YTVEERRNFRELL-DTGLVDAFRHLYPDEEGAYTYWSFRNKSARLNNKGWRLDYHLVSEQ 299
+T +ER+ F ELL L D+FRHLYP+ AYT+W++ AR N GWRLDY L+S
Sbjct: 189 FTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMN-ARSKNVGWRLDYFLLSHS 247
Query: 300 LANNIKDCIIRSDVQGSTHCPVVLRLSL 327
L + D IRS GS HCP+ L L+L
Sbjct: 248 LLPALCDSKIRSKALGSDHCPITLYLAL 275
>d1akoa_ d.151.1.1 (A:) DNA-repair enzyme exonuclease III
{Escherichia coli [TaxId: 562]}
Length = 268
Score = 145 bits (365), Expect = 3e-42
Identities = 59/268 (22%), Positives = 110/268 (41%), Gaps = 18/268 (6%)
Query: 73 KVSTWNVNGLRACVKKNACVEYILEENPDIMALQQIRCQEDEVPESFRKSLSHYHMFWIG 132
K ++N+NGLRA + + + PD++ LQ+ + +D P L + +
Sbjct: 2 KFVSFNINGLRARPHQ--LEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQ 59
Query: 133 SDKGQGGVGLLTKEKPLTVKYGIPGVSNQRGRVITAKFKRFTFITV-----YVPNSGIKL 187
+ + + QR ++ +TV S
Sbjct: 60 KGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHP 119
Query: 188 KAIDFRMIWDQHFYDYIQSELRSNSNIIISGDLNVCLQSIDLANPDKNVKTA------GY 241
+ + Q+ +Y+++EL+ ++ ++I GD+N+ +D+ ++N K +
Sbjct: 120 IKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSF 179
Query: 242 TVEERRNFRELLDTGLVDAFRHLYPDEEGAYTYWSFRNKSARLNNKGWRLDYHLVSEQLA 301
EER L+ GLVD FRH P ++++ +R+K +N+G R+D L S+ LA
Sbjct: 180 LPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSK-GFDDNRGLRIDLLLASQPLA 238
Query: 302 NNIKDCII----RSDVQGSTHCPVVLRL 325
+ I RS + S H PV
Sbjct: 239 ECCVETGIDYEIRSMEKPSDHAPVWATF 266
>d1vyba_ d.151.1.1 (A:) Endonuclease domain of LINE-1 reverse
transcriptase homolog {Human (Homo sapiens) [TaxId:
9606]}
Length = 236
Score = 107 bits (267), Expect = 3e-28
Identities = 33/255 (12%), Positives = 83/255 (32%), Gaps = 24/255 (9%)
Query: 71 KVKVSTWNVNGLRACVKKNACVEYILEENPDIMALQQIRCQEDEVPESFRKSLSHYHMFW 130
+ + T N+NGL + +K++ +I ++P + +Q+ + K +
Sbjct: 5 HITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQAN 64
Query: 131 IGSDKGQGGVGLLTKEKPLTVKYGIPGVSNQRGRVITAKFKRFTFITVYVPNSGIKLKAI 190
K + + K K + + + + T + +Y P
Sbjct: 65 GKQKKAGVAILVSDKTDFKPTKIKRDKEGHYIMVKGSIQQEELTILNIYAP--------- 115
Query: 191 DFRMIWDQHFYDYIQSELRSNSNIIISGDLNVCLQSIDLANPDKNVKTAGYTVEERRNFR 250
F + S+L+ + + + + + + T ++ +
Sbjct: 116 ---NTGAPRFIKQVLSDLQRDLDSH-----TLIMGDFNTPLSTLDRSTRQKVNKDTQELN 167
Query: 251 ELLDTGLVDAFRHLYPDEEGAYTYWSFRNKSARLNNKGWRLDYHLVSEQLANNIKDCIIR 310
L + + YT++S ++ ++D+ + S+ L + K I
Sbjct: 168 SALHQADLIDIYRTLHPKSTEYTFFSAP------HHTYSKIDHIVGSKALLSKCKRTEII 221
Query: 311 SDVQGSTHCPVVLRL 325
++ S H + L L
Sbjct: 222 TNY-LSDHSAIKLEL 235
>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex
lectularius) [TaxId: 79782]}
Length = 280
Score = 104 bits (260), Expect = 8e-27
Identities = 39/283 (13%), Positives = 75/283 (26%), Gaps = 36/283 (12%)
Query: 71 KVKVSTWNVNGLRACVKKNACVEYILEENPDIMA--LQQIRCQEDEVPESFRK------- 121
V +WN RA + E PD++A +Q Q D+ +
Sbjct: 6 SVHTVSWNSGHERAPTNLEELLGLNSGETPDVIAVAVQGFGFQTDKPQQGPACVKNFQSL 65
Query: 122 -SLSHYHMFWIGSDKGQGGVGLLTKEKPL-------TVKYGIPG-VSNQRGRVITAKF-- 170
+ Y G+ + EK L G V +
Sbjct: 66 LTSKGYTKLKNTI-TETMGLTVYCLEKHLDQNTLKNETIIVTVDDQKKSGGIVTSFTIYN 124
Query: 171 KRFTFITVYVPNSGIKLKAIDFRMIWDQHFYDYIQSELRSNSNIIISGDLNVCLQSIDLA 230
KRF+F T + + + + + + + GDLNV +++
Sbjct: 125 KRFSFTTSRMSDEDVTST----NTKYAYDTRLDYSKKDDPSDFLFWIGDLNVRVETNATH 180
Query: 231 NPDKNVKTAGYTVEERRNFRELLDTGLVDAFRHLYPDEEGAYTYWSFRNKSARLNNKGWR 290
++ F +L F + + + +
Sbjct: 181 AKSLV---DQNNIDGLMAFDQLKKAKEQKLFDG-WTEPQVTFKPTYKFKP-NTDEYDLSA 235
Query: 291 ----LDYHLVSEQLANNIKDCIIRS--DVQGSTHCPVVLRLSL 327
D L I+ S + + + H PV+ + +
Sbjct: 236 TPSWTDRALYKSGTGKTIQPLSYNSLTNYKQTEHRPVLAKFRV 278
>d2f1na1 d.151.1.1 (A:1-250) Cytolethal distending toxin subunit B
{Escherichia coli [TaxId: 562]}
Length = 250
Score = 103 bits (257), Expect = 1e-26
Identities = 44/288 (15%), Positives = 78/288 (27%), Gaps = 74/288 (25%)
Query: 70 TKVKVSTWNVNGLRACVKKNACVE----YILEENPDIMALQQIRCQEDEVPESFRKSLS- 124
T +V+TWN+ G A + + E DI+A+Q+ ++ R S
Sbjct: 3 TDFRVATWNLQGASATTESKWNINVRQLISGENAVDILAVQEAGSPPSTAVDTGRVIPSP 62
Query: 125 -------------------HYHMFW-IGSDKGQGGVGLLTKEKPLTVKYGIPGVSNQRGR 164
Y F + + G+ + L++ + V P R
Sbjct: 63 GIPVRELIWNLSTNSRPQQVYIYFSAVDALGGRVNLALVSNRRADEVFVLSPVRQGGR-P 121
Query: 165 VITAKFKRFTFITVYVPNSGIKLKAIDFRMIWDQ--HFYDYIQSELRSNSNIIISGDLNV 222
++ + F T + D + ++ +F+ + + N +I GD N
Sbjct: 122 LLGIRIGNDAFFTAHAIAMR----NNDAPALVEEVYNFFRDSRDPVHQALNWMILGDFNR 177
Query: 223 CLQSIDLANPDKNVKTAGYTVEERRNFRELLDTGLVDAFRHLYPDEEGAYTYWSFRNKSA 282
L + A + P T S
Sbjct: 178 EPAD----------------------LEMNLTVPVRRASEIISPAA---ATQTS------ 206
Query: 283 RLNNKGWRLDYHLVSEQLANNIK------DCIIRSDVQGSTHCPVVLR 324
LDY + +A R S H PV +
Sbjct: 207 -----QRTLDYAVAGNSVAFRPSPLQAGIVYGARRTQISSDHFPVGVS 249
>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon
(ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]}
Length = 228
Score = 90.9 bits (224), Expect = 3e-22
Identities = 30/257 (11%), Positives = 65/257 (25%), Gaps = 36/257 (14%)
Query: 73 KVSTWNVNGLRACVKKNACVEYILEENPDIMALQQIRCQEDEVPESFRKSLSHYHMFWIG 132
+V N+ + I +Q+ + K +F
Sbjct: 4 RVLQANLQRKKL--ATAELAIEAATRKAAIALIQEPYVGGAKSM----KGFRGVRVFQST 57
Query: 133 SDKGQGGVGLLTKEKPLTVKYGIPGVSNQRGRV--ITAKFKRFTFITVYVPNSGIKLKAI 190
+ + P ++ V I + T ++ Y
Sbjct: 58 AQGDGTVKAAIAVFDHDLDVIQYPQLTTNNIVVVGIRTRAWEITLVSYYFEP-------- 109
Query: 191 DFRMIWDQHFYDYIQSELRSNSNIIISGDLNVCLQSIDLANPDKNVKTAGYTVEERRNFR 250
D + ++ ++ +I GD N + + R
Sbjct: 110 DKPIESYLEQIKRVERKMGPK-RLIFGGDANAKSTWWG---------------SKEDDAR 153
Query: 251 ELLDTGLVDAFRHLYPDEEGAYTYWSFRNKSARLNNKGWRLDYHLVSEQLANNIKDCIIR 310
G + +E T+ + R + R+D +E + + I +
Sbjct: 154 GDQLMGTLGELGLHILNEGDVPTFDTIRGGKRYQS----RVDVTFCTEDMLDLIDGWRVD 209
Query: 311 SDVQGSTHCPVVLRLSL 327
D+ S H +V + L
Sbjct: 210 EDLVSSDHNGMVFNIRL 226
>d1sr4b_ d.151.1.1 (B:) Cytolethal distending toxin subunit B
{Haemophilus ducreyi [TaxId: 730]}
Length = 261
Score = 81.8 bits (200), Expect = 1e-18
Identities = 35/282 (12%), Positives = 75/282 (26%), Gaps = 51/282 (18%)
Query: 70 TKVKVSTWNVNGLRACVKKNACVE----YILEENPDIMALQQIRCQEDEVP--------- 116
+ KV+TWN+ G A + + E+ DI+ +Q+
Sbjct: 3 SDFKVATWNLQGSSAVNESKWNINVRQLLSGEQGADILMVQEAGSLPSSAVRTSRVIQHG 62
Query: 117 ----------ESFRKSLSHYHMFWIGSD--KGQGGVGLLTKEKPLTVKYGIPGVSNQRGR 164
R + ++++ D + + ++++ + S + R
Sbjct: 63 GTPIEEYTWNLGTRSRPNMVYIYYSRLDVGANRVNLAIVSRRQADEAFIVHSDSSVLQSR 122
Query: 165 -VITAKFKRFTFITVYVPNSGIKLKAIDFRMIWDQHFYDYIQSELRSNSNIIISGDLNVC 223
+ + F TV+ +G R I+ F R + ++ GD N
Sbjct: 123 PAVGIRIGTDVFFTVHALATGGSDAVSLIRNIFT-TFNSSSSPPERRVYSWMVVGDFNRA 181
Query: 224 LQSIDLANPDKNVKTAGYTVEERRNFRELLDTGLVDAFRHLYPDEEGAYTYWSFRNKSAR 283
+++ + + + + P E T+ S
Sbjct: 182 PANLE--------------------VALRQEPAVSENTIIIAPTE---PTHRSGNIL-DY 217
Query: 284 LNNKGWRLDYHLVSEQLANNIKDCIIRSDVQGSTHCPVVLRL 325
L + + S H PV
Sbjct: 218 AILHDAHLPRREQARERIGASLMLNQLRSQITSDHFPVSFVR 259
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 345
Score = 57.5 bits (138), Expect = 5e-10
Identities = 45/290 (15%), Positives = 77/290 (26%), Gaps = 43/290 (14%)
Query: 71 KVKVSTWNVNGLRACVKKNACVEYILEENPDI--MALQQIRCQE---------------- 112
K+ V+++N+NG A K + DI + Q+I
Sbjct: 26 KIFVASYNLNGCSATTKLENWLFPENTPLADIYVVGFQEIVQLTPQQVISADPAKRREWE 85
Query: 113 ---DEVPESFRKSLSHYHMFWIGSDKGQGGVGLLTKEKPL---------TVKYGIPGVSN 160
+ S Y G + + KE L K G+ GVS
Sbjct: 86 SCVKRLLNGKCTSGPGYVQLRSGQ-LVGTALMIFCKESCLPSIKNVEGTVKKTGLGGVSG 144
Query: 161 QRGRV---ITAKFKRFTFITVYVPNSGIKLKA-IDFRMIWDQHFYDYIQSELRSNSNIII 216
+G V + FIT ++ + ++ ++
Sbjct: 145 NKGAVAIRFDYEDTGLCFITSHLAAGYTNYDERDHDYRTIASGLRFRRGRSIFNHDYVVW 204
Query: 217 SGDLNVCLQSIDLANPDKNVKTAGYTVEERRNFRELLDTGLVDAFRHLYPDEEGAYTYWS 276
GD N + + + E + + TG V F P TY
Sbjct: 205 FGDFNYRISLTYEEVVPCIAQGKLSYLFEYDQLNKQMLTGKVFPFFSELPITF-PPTYKF 263
Query: 277 FRNKSARLNNKGWRL----DYHLVSEQLANNIKDCIIRSDVQGSTHCPVV 322
+ R+ D L +L + + S H P+
Sbjct: 264 DIGTDIYDTSDKHRVPAWTDRILYRGEL---VPHSYQSVPLYYSDHRPIY 310
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C
{Bacillus cereus [TaxId: 1396]}
Length = 299
Score = 56.9 bits (135), Expect = 6e-10
Identities = 34/297 (11%), Positives = 79/297 (26%), Gaps = 40/297 (13%)
Query: 71 KVKVSTWNVNGLRACVKKN--------ACVEYILEENPDIMALQQIRCQE--DEVPESFR 120
+KV T NV L + N +N D++ L ++ D + + +
Sbjct: 3 TLKVMTHNVYMLSTNLYPNWGQTERADLIGAADYIKNQDVVILNEVFDNSASDRLLGNLK 62
Query: 121 KSLSHYHMFWIG---------------SDKGQGGVGLLTKEKPLTVKYGIPGVSNQRGRV 165
K + S GGV +++K + +
Sbjct: 63 KEYPNQTAVLGRSSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKIQYVFAKGCGPDNL 122
Query: 166 ITAKF---------KRFTFITVYVPN----SGIKLKAIDFRMIWDQHFYDYIQSELRSNS 212
F + I ++ G A + + +N
Sbjct: 123 SNKGFVYTKIKKNDRFVHVIGTHLQAEDSMCGKTSPASVRTNQLKEIQDFIKNKNIPNNE 182
Query: 213 NIIISGDLNVCLQSIDLANPDKNVKTAGYTVEERRNFRELLDTGLVDAFRHLYPDEEGAY 272
++I GD+NV + + N + ++ T + +
Sbjct: 183 YVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTATWDATTNSIAKYNFPDSP 242
Query: 273 TYWSFRNKSARLNNKGWRLDYHLVSEQLANNIKDCIIRSDVQG--STHCPVVLRLSL 327
+ +++ + ++ ++ + + S H PV +S+
Sbjct: 243 AEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTYNDYSDHYPVEATISM 299
>d2a40b1 d.151.1.1 (B:1-260) Deoxyribonuclease I {Cow (Bos taurus)
[TaxId: 9913]}
Length = 260
Score = 53.4 bits (126), Expect = 7e-09
Identities = 29/289 (10%), Positives = 69/289 (23%), Gaps = 65/289 (22%)
Query: 73 KVSTWNVNGLRAC-VKKNACVEYILE--ENPDIMALQQIRCQEDEVPESFRKSLSHYHMF 129
K++ +N+ + YI+ DI+ +Q++R L+
Sbjct: 2 KIAAFNIRTFGETKMSNATLASYIVRIVRRYDIVLIQEVRDSHLVAVGKLLDYLNQDDPN 61
Query: 130 W--------IGSDKGQGGVGLLTKEKPLTVK----------YGIPGVSNQRGRVITAKFK 171
+G + + L + ++V ++ V+
Sbjct: 62 TYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSFSREPAVVKFSSH 121
Query: 172 RFTFITVYVPNSGIKLKAIDFRMIWDQHFYDYIQSELRSNSNIIISGDLNVCLQSIDLAN 231
+ + Y +Q + +++++ GD N
Sbjct: 122 STKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQ-QKWHLNDVMLMGDFN---------- 170
Query: 232 PDKNVKTAGYTVEERRNFRELLDTGLVDAFRHLYPDEEGAYTYWSFRNKSARLNNKGWRL 291
+ L + + + A T +
Sbjct: 171 ----------ADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTA---------TSTNCAY 211
Query: 292 DYHLVSEQLANNIK--------------DCIIRSDVQGSTHCPVVLRLS 326
D +V+ L + + S H PV + L+
Sbjct: 212 DRIVVAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 260
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C
{Listeria ivanovii [TaxId: 1638]}
Length = 293
Score = 50.7 bits (119), Expect = 6e-08
Identities = 38/309 (12%), Positives = 71/309 (22%), Gaps = 74/309 (23%)
Query: 68 YTTKVKVSTWNVNGLRACVKKN--------ACVEYILEENPDIMALQQIRCQEDE----- 114
Y K+++ NV + N + +N D++ L +
Sbjct: 1 YPGNFKITSHNVYLFSRNIYPNWGQMHRADLIAQADYMKNNDVVILNEAFDTSASHRLLN 60
Query: 115 -----------VPESFRKSLSHYHMFWIGSDKGQGGVGLLTKEKPLTVKYGIPGVSNQRG 163
V + + GGV ++++ + I
Sbjct: 61 NLREMYPHQTPVIGRSKHGWDKTEGNYSNFALEDGGVAVVSQWPIVEKSQHIFQRGGGAD 120
Query: 164 RVITAKF---------KRFTFITVYV----PNSGIKLKAIDFRMIWDQHFYDYIQSELRS 210
R+ F K + I + + + +
Sbjct: 121 RLSNKGFAYVKIMKNGKPYHIIGTHTQADDSLISKDTSRAIRAEQMQEIQTFIAKKNIPK 180
Query: 211 NSNIIISGDLNVCLQSIDLANPDKNVKTAGYTVEERRNFRELLDTGLVDAFRHLYPDEEG 270
+ I I GDLNV + + + L +
Sbjct: 181 DEIIFIGGDLNVNYGTDEYHDM-------------------LKLLNVSSPANFNGQMATW 221
Query: 271 AYTYWSFRNKSARLNNKGWRLDYHLVSEQLAN--NIKDCIIRSDVQG------------- 315
T S +S LDY V A + + ++ +
Sbjct: 222 DPTTNSMLKESYP-KAAPEYLDYIFVENGHARPHSWHNKVLHTKSPQWSVKSWFKTYTYQ 280
Query: 316 --STHCPVV 322
S H PVV
Sbjct: 281 DFSDHYPVV 289
>d2bcjq1 a.66.1.1 (Q:67-183) Transducin (alpha subunit), insertion
domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 117
Score = 25.3 bits (55), Expect = 6.5
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 241 YTVEERRNFRELLDTGLVDAFRHL 264
Y+ E++R F +L+ + A + +
Sbjct: 1 YSDEDKRGFTKLVYQNIFTAMQAM 24
>d1n2aa2 c.47.1.5 (A:1-80) Class beta GST {Escherichia coli [TaxId:
562]}
Length = 80
Score = 24.5 bits (53), Expect = 7.6
Identities = 9/60 (15%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Query: 46 ENQIPKKQVKFDISHEEGSRKPYTTKV----KVSTWNVNGLRACVKKNACVEYILEENPD 101
E+ V D+ + V +V ++ + A ++Y+ + PD
Sbjct: 20 ESGKDFTLVSVDLMKKRLENGDDYFAVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPD 79
>d1dmha_ b.3.6.1 (A:) Catechol 1,2-dioxygenase {Acinetobacter
calcoaceticus [TaxId: 471]}
Length = 309
Score = 25.7 bits (56), Expect = 9.3
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 160 NQRGRVITAKFKRFTFITVY 179
N R +IT + ++ T+
Sbjct: 175 NMRRSIITDENGQYRVRTIL 194
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.398
Gapped
Lambda K H
0.267 0.0427 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,245,336
Number of extensions: 58417
Number of successful extensions: 199
Number of sequences better than 10.0: 1
Number of HSP's gapped: 171
Number of HSP's successfully gapped: 19
Length of query: 327
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 241
Effective length of database: 1,226,816
Effective search space: 295662656
Effective search space used: 295662656
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)