BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6008
(123 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3VKF|A Chain A, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
pdb|3VKF|B Chain B, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
Length = 585
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 10 TVSFSTGFQIILEPNSRHLEPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGP 69
T +F I E N+ L PV FLGVPYAAPP G+ R+ P PP W+ R A P
Sbjct: 12 TTNFGKIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDIRNATQFAP 71
Query: 70 VCPQKFPDLSNKTAALQHMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
VCPQ D L PV L + Y+ + SEDCL+LNIYVP
Sbjct: 72 VCPQNIIDGRLPEVML---PVWFTNNLDVVSSYVQDQSEDCLYLNIYVP 117
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex
pdb|3B3Q|B Chain B, Crystal Structure Of A Synaptic Adhesion Complex
Length = 577
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 10 TVSFSTGFQIILEPNSRHLEPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGP 69
T +F I E N+ L PV FLGVPYAAPP G+ R+ P PP W+ R A P
Sbjct: 27 TTNFGKIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDIRNATQFAP 86
Query: 70 VCPQKFPDLSNKTAALQHMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
VCPQ D L PV L + Y+ + SEDCL+LNIYVP
Sbjct: 87 VCPQNIIDGRLPEVML---PVWFTNNLDVVSSYVQDQSEDCLYLNIYVP 132
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|B Chain B, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|C Chain C, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|D Chain D, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIX|A Chain A, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|B Chain B, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|C Chain C, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|D Chain D, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
Length = 574
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 10 TVSFSTGFQIILEPNSRHLEPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGP 69
T +F I E N+ L PV FLGVPYAAPP G+ R+ P PP W+ R A P
Sbjct: 14 TTNFGKIRGIKKELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDIRNATQFAP 73
Query: 70 VCPQKFPDLSNKTAALQHMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
VCPQ D L PV L + Y+ + SEDCL+LNIYVP
Sbjct: 74 VCPQNIIDGRLPEVML---PVWFTNNLDVVSSYVQDQSEDCLYLNIYVP 119
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|3BE8|B Chain B, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|2WQZ|A Chain A, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2WQZ|B Chain B, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2XB6|A Chain A, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
pdb|2XB6|B Chain B, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
Length = 588
Score = 79.7 bits (195), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 28 LEPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQH 87
L PVE +LGVPYA+PP G+ R+ P PP +WTG R VCPQ L ++
Sbjct: 36 LGPVEQYLGVPYASPPTGERRFQPPEPPSSWTGIRNTTQFAAVCPQH---LDERSLLHDM 92
Query: 88 MPVGRYQQLLRMEPYLGNYSEDCLHLNIYVPGSAQL 123
+P+ L + Y+ + +EDCL+LNIYVP +
Sbjct: 93 LPIWFTANLDTLMTYVQDQNEDCLYLNIYVPTEDDI 128
>pdb|3BL8|A Chain A, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|B Chain B, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|C Chain C, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|D Chain D, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
Length = 580
Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 22 EPNSRHLEPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNK 81
E N+ L PV FLGVPYA PP+G R+ P P +W G R A L P CPQ +L
Sbjct: 18 ELNNEILGPVVQFLGVPYATPPLGARRFQPPEAPASWPGVRNATTLPPACPQ---NLHGA 74
Query: 82 TAALQHMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
A+ +PV L Y+ N SEDCL+LN+YVP
Sbjct: 75 LPAIM-LPVWFTDNLEAAATYVQNQSEDCLYLNLYVP 110
>pdb|1K4Y|A Chain A, Crystal Structure Of Rabbit Liver Carboxylesterase In
Complex With 4- Piperidino-Piperidine
Length = 534
Score = 62.4 bits (150), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
+PV FLGVP+A PP+G LR+AP P +W+ + + P+C Q A HM
Sbjct: 23 QPVAVFLGVPFAKPPLGSLRFAPPQPAESWSHVKNTTSYPPMCSQD--------AVSGHM 74
Query: 89 PVGRYQQLLRMEPYLGNYSEDCLHLNIYVPGS 120
+ R E +SEDCL+LNIY P
Sbjct: 75 LSELFTN--RKENIPLKFSEDCLYLNIYTPAD 104
>pdb|1C7J|A Chain A, Pnb Esterase 56c8
Length = 489
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 43/90 (47%), Gaps = 18/90 (20%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V + G+PYA PPVGQ R+ PP W A A GPVCPQ LS
Sbjct: 21 VHKWKGIPYAKPPVGQWRFKAPEPPEVWEDVLDATAYGPVCPQPSDLLSLS--------- 71
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVPGS 120
Y +L R SEDCL++N++ P +
Sbjct: 72 --YTELPRQ-------SEDCLYVNVFAPDT 92
>pdb|1QE3|A Chain A, Pnb Esterase
Length = 489
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 18/90 (20%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V + G+PYA PPVGQ R+ PP W A A GP+CPQ LS
Sbjct: 21 VHKWKGIPYAKPPVGQWRFKAPEPPEVWEDVLDATAYGPICPQPSDLLSLS--------- 71
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVPGS 120
Y +L R SEDCL++N++ P +
Sbjct: 72 --YTELPRQ-------SEDCLYVNVFAPDT 92
>pdb|1C7I|A Chain A, Thermophylic Pnb Esterase
Length = 489
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 18/90 (20%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V + G+PYA PPVGQ R+ PP W A GPVCPQ LS
Sbjct: 21 VHKWKGIPYAKPPVGQWRFKAPEPPEVWEDVLDATVYGPVCPQPSDLLSLS--------- 71
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVPGS 120
Y++L R SEDCL++N++ P +
Sbjct: 72 --YKELPRQ-------SEDCLYVNVFAPDT 92
>pdb|1MX1|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX5|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX9|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
Length = 548
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
+PV FLG+P+A PP+G LR+ P P W+ + A + P+C Q L +
Sbjct: 27 QPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNATSYPPMCTQD----PKAGQLLSEL 82
Query: 89 PVGRYQQL-LRMEPYLGNYSEDCLHLNIYVPGS 120
R + + L++ SEDCL+LNIY P
Sbjct: 83 FTNRKENIPLKL-------SEDCLYLNIYTPAD 108
>pdb|2DQY|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQZ|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DR0|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2H7C|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|D Chain D, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|E Chain E, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|F Chain F, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
Length = 542
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
+PV FLG+P+A PP+G LR+ P P W+ + A + P+C Q L +
Sbjct: 27 QPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNATSYPPMCTQD----PKAGQLLSEL 82
Query: 89 PVGRYQQL-LRMEPYLGNYSEDCLHLNIYVPGS 120
R + + L++ SEDCL+LNIY P
Sbjct: 83 FTNRKENIPLKL-------SEDCLYLNIYTPAD 108
>pdb|1YA4|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA8|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YAH|A Chain A, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|B Chain B, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|C Chain C, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAJ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|2HRQ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRR|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|4AB1|A Chain A, Recombinant Human Carboxylesterase 1 From Whole Cabbage
Loopers
Length = 532
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
+PV FLG+P+A PP+G LR+ P P W+ + A + P+C Q L +
Sbjct: 25 QPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNATSYPPMCTQD----PKAGQLLSEL 80
Query: 89 PVGRYQQL-LRMEPYLGNYSEDCLHLNIYVPGS 120
R + + L++ SEDCL+LNIY P
Sbjct: 81 FTNRKENIPLKL-------SEDCLYLNIYTPAD 106
>pdb|3K9B|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
Length = 529
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
+PV FLG+P+A PP+G LR+ P P W+ + A + P+C Q L +
Sbjct: 22 QPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNATSYPPMCTQD----PKAGQLLSEL 77
Query: 89 PVGRYQQL-LRMEPYLGNYSEDCLHLNIYVPGS 120
R + + L++ SEDCL+LNIY P
Sbjct: 78 FTNRKENIPLKL-------SEDCLYLNIYTPAD 103
>pdb|3DL7|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
Length = 538
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>pdb|2JGE|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Methamidophos
pdb|2JGJ|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Methamidophos
Length = 536
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>pdb|1MAA|A Chain A, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|B Chain B, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|C Chain C, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|D Chain D, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
Length = 547
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>pdb|2XUD|A Chain A, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUD|B Chain B, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUH|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUH|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUI|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUI|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUJ|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUJ|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUK|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUK|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUO|A Chain A, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUO|B Chain B, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUP|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUP|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUQ|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
pdb|2XUQ|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
Length = 543
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>pdb|2JGJ|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Methamidophos
Length = 535
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 25 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 84
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 85 PNR------------ELSEDCLYLNVWTP 101
>pdb|2XUF|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUF|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUG|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
pdb|2XUG|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
Length = 544
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>pdb|2JGE|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Methamidophos
Length = 533
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 25 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 84
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 85 PNR------------ELSEDCLYLNVWTP 101
>pdb|3DL7|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
Length = 534
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 25 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 84
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 85 PNR------------ELSEDCLYLNVWTP 101
>pdb|1KU6|A Chain A, Fasciculin 2-Mouse Acetylcholinesterase Complex
Length = 549
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>pdb|4A16|A Chain A, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|B Chain B, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|C Chain C, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|D Chain D, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
Length = 545
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 25 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 84
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 85 PNR------------ELSEDCLYLNVWTP 101
>pdb|2JGF|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGF|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGI|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGI|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGK|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGK|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGL|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGL|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGM|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGM|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JEZ|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JEZ|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JF0|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|2JF0|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|3DL4|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|3DL4|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|2WHP|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
pdb|2WHQ|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WHQ|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WU3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU4|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2WU4|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2Y2U|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2U|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2V|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
pdb|2Y2V|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
Length = 548
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>pdb|1N5M|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
pdb|1N5M|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
Length = 541
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>pdb|2HA4|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA4|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA5|A Chain A, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA5|B Chain B, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA6|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA6|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA7|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
pdb|2HA7|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
Length = 543
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>pdb|2WHP|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
Length = 548
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>pdb|2C0P|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0P|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0Q|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2C0Q|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2JEY|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2JEY|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2WHR|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|2WHR|B Chain B, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|4A23|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4A23|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4ARA|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARA|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARB|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution.
pdb|4ARB|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution
Length = 548
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>pdb|1MAH|A Chain A, Fasciculin2-Mouse Acetylcholinesterase Complex
pdb|1J06|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J06|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J07|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1J07|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1N5R|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|1N5R|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|2H9Y|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2H9Y|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2HA0|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA0|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA2|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA2|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2HA3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2GYU|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYU|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYV|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYV|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYW|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2GYW|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2WLS|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|2WLS|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|4BC0|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC1|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
Length = 543
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>pdb|1C2B|A Chain A, Electrophorus Electricus Acetylcholinesterase
Length = 540
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 25 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 84
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 85 PNR------------ELSEDCLYLNVWTP 101
>pdb|1C2O|A Chain A, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|B Chain B, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|C Chain C, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|D Chain D, Electrophorus Electricus Acetylcholinesterase
Length = 539
Score = 51.6 bits (122), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 24 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 83
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 84 PNR------------ELSEDCLYLNVWTP 100
>pdb|1Q83|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q83|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q84|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
pdb|1Q84|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
Length = 580
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 59 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 118
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 119 PNR------------ELSEDCLYLNVWTP 135
>pdb|2OGS|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.2
Length = 498
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 18/93 (19%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQ-KFPDLSNKTAALQH 87
E V + G+PYA PVG+ R+ P PP W G R A + GPV Q P S +
Sbjct: 19 EGVFVWKGIPYAKAPVGERRFLPPEPPDAWDGVREATSFGPVVMQPSDPIFSGLLGRMSE 78
Query: 88 MPVGRYQQLLRMEPYLGNYSEDCLHLNIYVPGS 120
P SED L+LNI+ P +
Sbjct: 79 AP-----------------SEDGLYLNIWSPAA 94
>pdb|2OGT|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.8
Length = 498
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 18/93 (19%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQ-KFPDLSNKTAALQH 87
E V + G+PYA PVG+ R+ P PP W G R A + GPV Q P S +
Sbjct: 19 EGVFVWKGIPYAKAPVGERRFLPPEPPDAWDGVREATSFGPVVMQPSDPIFSGLLGRMSE 78
Query: 88 MPVGRYQQLLRMEPYLGNYSEDCLHLNIYVPGS 120
P SED L+LNI+ P +
Sbjct: 79 AP-----------------SEDGLYLNIWSPAA 94
>pdb|1UKC|A Chain A, Crystal Structure Of Aspergillus Niger Esta
pdb|1UKC|B Chain B, Crystal Structure Of Aspergillus Niger Esta
Length = 522
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 25/92 (27%)
Query: 31 VEAFLGVPYAAPPVGQLRY-APANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
V+ FLG+ YA+PP+G LR+ AP +PP N T + A GP+C
Sbjct: 29 VDEFLGMRYASPPIGDLRFRAPQDPPANQT-LQSATEYGPIC------------------ 69
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVPGSA 121
+G L E G+ SEDCL +N++ P +A
Sbjct: 70 IG-----LDEEESPGDISEDCLFINVFKPSTA 96
>pdb|2X8B|A Chain A, Crystal Structure Of Human Acetylcholinesterase Inhibited
By Aged Tabun And Complexed With Fasciculin-Ii
Length = 583
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PP+G R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPMGPRRFLPPEPKQPWSGVVDATTFQSVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>pdb|1F8U|A Chain A, Crystal Structure Of Mutant E202q Of Human
Acetylcholinesterase Complexed With Green Mamba Venom
Peptide Fasciculin-ii
Length = 583
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PP+G R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPMGPRRFLPPEPKQPWSGVVDATTFQSVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>pdb|1B41|A Chain A, Human Acetylcholinesterase Complexed With Fasciculin-Ii,
Glycosylated Protein
Length = 539
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PP+G R+ P P W+G A VC Q L +
Sbjct: 24 PVSAFLGIPFAEPPMGPRRFLPPEPKQPWSGVVDATTFQSVCYQYVDTLYPGFEGTEMWN 83
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 84 PNR------------ELSEDCLYLNVWTP 100
>pdb|3LII|A Chain A, Recombinant Human Acetylcholinesterase
pdb|3LII|B Chain B, Recombinant Human Acetylcholinesterase
Length = 540
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PP+G R+ P P W+G A VC Q L +
Sbjct: 25 PVSAFLGIPFAEPPMGPRRFLPPEPKQPWSGVVDATTFQSVCYQYVDTLYPGFEGTEMWN 84
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 85 PNR------------ELSEDCLYLNVWTP 101
>pdb|4EY4|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In The Apo State
pdb|4EY4|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In The Apo State
pdb|4EY5|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Huperzine A
pdb|4EY5|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Huperzine A
pdb|4EY6|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Galantamine
pdb|4EY6|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Galantamine
pdb|4EY7|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Donepezil
pdb|4EY7|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Donepezil
pdb|4EY8|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Fasciculin-2
Length = 542
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PP+G R+ P P W+G A VC Q L +
Sbjct: 27 PVSAFLGIPFAEPPMGPRRFLPPEPKQPWSGVVDATTFQSVCYQYVDTLYPGFEGTEMWN 86
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 87 PNR------------ELSEDCLYLNVWTP 103
>pdb|1GQR|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Rivastigmine
pdb|1GQS|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With Nap
pdb|1JJB|A Chain A, A Neutral Molecule In Cation-Binding Site: Specific
Binding Of Peg-Sh To Acetylcholinesterase From Torpedo
Californica
Length = 532
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQ----KFPDLSNKTAALQ 86
+ AFLG+P+A PPVG +R+ P W+G A C Q +FP S
Sbjct: 24 ISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSGSEMWNP 83
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
+ + SEDCL+LNI+VP
Sbjct: 84 NREM----------------SEDCLYLNIWVP 99
>pdb|2DFP|A Chain A, X-Ray Structure Of Aged Di-Isopropyl-Phosphoro-Fluoridate
(Dfp) Bound To Acetylcholinesterase
Length = 534
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQ----KFPDLSNKTAALQ 86
+ AFLG+P+A PPVG +R+ P W+G A C Q +FP S
Sbjct: 26 ISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSGSEMWNP 85
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
+ + SEDCL+LNI+VP
Sbjct: 86 NREM----------------SEDCLYLNIWVP 101
>pdb|3GEL|A Chain A, O-Methylphosphorylated Torpedo Acetylcholinesterase
Obtained By Reaction With Methyl Paraoxon (Aged)
Length = 532
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQ----KFPDLSNKTAALQ 86
+ AFLG+P+A PPVG +R+ P W+G A C Q +FP S
Sbjct: 24 ISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSGSEMWNP 83
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
+ + SEDCL+LNI+VP
Sbjct: 84 NREM----------------SEDCLYLNIWVP 99
>pdb|1EEA|A Chain A, Acetylcholinesterase
Length = 534
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQ----KFPDLSNKTAALQ 86
+ AFLG+P+A PPVG +R+ P W+G A C Q +FP S
Sbjct: 27 ISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSGSEMWNP 86
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
+ + SEDCL+LNI+VP
Sbjct: 87 NREM----------------SEDCLYLNIWVP 102
>pdb|3I6M|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With N-Piperidinopropyl-Galanthamine
pdb|3I6Z|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With N-Saccharinohexyl-Galanthamine
Length = 534
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQ----KFPDLSNKTAALQ 86
+ AFLG+P+A PPVG +R+ P W+G A C Q +FP S
Sbjct: 26 ISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSGSEMWNP 85
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
+ + SEDCL+LNI+VP
Sbjct: 86 NREM----------------SEDCLYLNIWVP 101
>pdb|1UT6|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With N-9-(1',2',3',4'-Tetrahydroacridinyl)-1,8-
Diaminooctane At 2.4 Angstroms Resolution.
pdb|1ACJ|A Chain A, Quaternary Ligand Binding To Aromatic Residues In The
Active-Site Gorge Of Acetylcholinesterase
pdb|1ACL|A Chain A, Quaternary Ligand Binding To Aromatic Residues In The
Active-Site Gorge Of Acetylcholinesterase
Length = 537
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQ----KFPDLSNKTAALQ 86
+ AFLG+P+A PPVG +R+ P W+G A C Q +FP S
Sbjct: 27 ISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSGSEMWNP 86
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
+ + SEDCL+LNI+VP
Sbjct: 87 NREM----------------SEDCLYLNIWVP 102
>pdb|2C58|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
20mm Acetylthiocholine
Length = 537
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQ----KFPDLSNKTAALQ 86
+ AFLG+P+A PPVG +R+ P W+G A C Q +FP S
Sbjct: 27 ISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSGSEMWNP 86
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
+ + SEDCL+LNI+VP
Sbjct: 87 NREM----------------SEDCLYLNIWVP 102
>pdb|2CEK|A Chain A, Conformational Flexibility In The Peripheral Site Of
Torpedo Californica Acetylcholinesterase Revealed By The
Complex Structure With A Bifunctional Inhibitor
Length = 535
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQ----KFPDLSNKTAALQ 86
+ AFLG+P+A PPVG +R+ P W+G A C Q +FP S
Sbjct: 27 ISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSGSEMWNP 86
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
+ + SEDCL+LNI+VP
Sbjct: 87 NREM----------------SEDCLYLNIWVP 102
>pdb|1SOM|A Chain A, Torpedo Californica Acetylcholinesterase Inhibited By
Nerve Agent Gd (Soman).
pdb|1DX6|A Chain A, Structure Of Acetylcholinesterase Complexed With
(-)-Galanthamine At 2.3a Resolution
pdb|1E3Q|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Bw284c51
pdb|1E66|A Chain A, Structure Of Acetylcholinesterase Complexed With
(-)-Huprine X At 2.1a Resolution
pdb|1HBJ|A Chain A, X-Ray Crystal Structure Of Complex Between Torpedo
Californica Ache And A Reversible Inhibitor, 4-Amino-5-
Fluo Ro-2-Methyl-3-(3-Trifluoroacetylbenzylthiomethyl)
Quinoline
pdb|1H22|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With (S,S)-(-)-Bis(10)-Hupyridone At 2.15a Resolution
pdb|1H23|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With (S,S)-(-)-Bis(12)-Hupyridone At 2.15a Resolution
pdb|1W4L|A Chain A, Complex Of Tcache With Bis-Acting Galanthamine Derivative
pdb|1W6R|A Chain A, Complex Of Tcache With Galanthamine Derivative
pdb|1W75|A Chain A, Native Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache)
pdb|1W75|B Chain B, Native Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache)
pdb|1W76|A Chain A, Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache) Complexed With Bis-Acting
Galanthamine Derivative
pdb|1W76|B Chain B, Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache) Complexed With Bis-Acting
Galanthamine Derivative
pdb|1ODC|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With N-4'-Quinolyl-N'-9"-(1",2",3",4"
-Tetrahydroacridinyl)-1,8-Diaminooctane At 2.2a
Resolution
pdb|1U65|A Chain A, Ache W. Cpt-11
pdb|1ZGB|A Chain A, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(R)-Tacrine(10)-Hupyridone Inhibitor.
pdb|1ZGC|A Chain A, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(Rs)-Tacrine(10)-Hupyridone Inhibitor.
pdb|1ZGC|B Chain B, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(Rs)-Tacrine(10)-Hupyridone Inhibitor.
pdb|2BAG|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With Ganstigmine
pdb|2CKM|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Alkylene-Linked Bis-Tacrine Dimer (7 Carbon Linker)
pdb|2CMF|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Alkylene-Linked Bis-Tacrine Dimer (5 Carbon Linker)
pdb|2J4F|A Chain A, Torpedo Acetylcholinesterase - Hg Heavy-Atom Derivative
pdb|1EVE|A Chain A, Three Dimensional Structure Of The Anti-Alzheimer Drug,
E2020 (Aricept), Complexed With Its Target
Acetylcholinesterase
pdb|2J3Q|A Chain A, Torpedo Acetylcholinesterase Complexed With Fluorophore
Thioflavin T
pdb|2VQ6|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With 2-
Pam
pdb|2J3D|A Chain A, Native Monoclinic Form Of Torpedo Acetylcholinesterase
pdb|3M3D|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
Xenon
pdb|3ZV7|A Chain A, Torpedo Californica Acetylcholinesterase Inhibition By
Bisnorcymserine
Length = 543
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQ----KFPDLSNKTAALQ 86
+ AFLG+P+A PPVG +R+ P W+G A C Q +FP S
Sbjct: 27 ISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSGSEMWNP 86
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
+ + SEDCL+LNI+VP
Sbjct: 87 NREM----------------SEDCLYLNIWVP 102
>pdb|1FSS|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Fasciculin-Ii
pdb|1CFJ|A Chain A, Methylphosphonylated Acetylcholinesterase (Aged) Obtained
By Reaction With O-Isopropylmethylphosphonofluoridate
(Gb, Sarin)
pdb|1VXO|A Chain A, Methylphosphonylated Acetylcholinesterase (Aged) Obtained
By Reaction With
O-Ethyl-S-[2-[bis(1-Methylethyl)amino]ethyl]
Methylphosphonothioate (Vx)
pdb|1VXR|A Chain A, O-Ethylmethylphosphonylated Acetylcholinesterase Obtained
By Reaction With
O-Ethyl-S-[2-[bis(1-Methylethyl)amino]ethyl]
Methylphosphonothioate (Vx)
pdb|1QTI|A Chain A, Acetylcholinesterase (E.C.3.1.1.7)
pdb|1QID|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point A) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIE|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point B) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIF|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point C) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIG|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point D) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIH|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point E) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QII|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point F) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIJ|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point G) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIK|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point H) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIM|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point I) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1EA5|A Chain A, Native Acetylcholinesterase (E.C. 3.1.1.7) From Torpedo
Californica At 1.8a Resolution
pdb|1GPK|A Chain A, Structure Of Acetylcholinesterase Complex With
(+)-Huperzine A At 2.1a Resolution
pdb|1GPN|A Chain A, Structure Of Acetylcholinesterase Complexed With Huperzine
B At 2.35a Resolution
pdb|2C4H|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
500mm Acetylthiocholine
pdb|2C5F|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium
pdb|2C5G|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
20mm Thiocholine
pdb|1AMN|A Chain A, Transition State Analog: Acetylcholinesterase Complexed
With M-(N,N,N-Trimethylammonio)trifluoroacetophenone
pdb|1AX9|A Chain A, Acetylcholinesterase Complexed With Edrophonium, Laue Data
pdb|1OCE|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With Mf268
pdb|1VOT|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Huperzine A
pdb|2ACE|A Chain A, Native Acetylcholinesterase (E.C. 3.1.1.7) From Torpedo
Californica
pdb|2ACK|A Chain A, Acetylcholinesterase Complexed With Edrophonium,
Monochromatic Data
pdb|2V96|A Chain A, Structure Of The Unphotolysed Complex Of Tcache With 1-(2-
Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine At 100k
pdb|2V96|B Chain B, Structure Of The Unphotolysed Complex Of Tcache With 1-(2-
Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine At 100k
pdb|2V97|A Chain A, Structure Of The Unphotolysed Complex Of Tcache With
1-(2- Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature
pdb|2V97|B Chain B, Structure Of The Unphotolysed Complex Of Tcache With
1-(2- Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature
pdb|2V98|A Chain A, Structure Of The Complex Of Tcache With
1-(2-Nitrophenyl)-2, 2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature, During
The First 5 Seconds Of Which Laser Irradiation At 266nm
Took Place
pdb|2V98|B Chain B, Structure Of The Complex Of Tcache With
1-(2-Nitrophenyl)-2, 2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature, During
The First 5 Seconds Of Which Laser Irradiation At 266nm
Took Place
pdb|2VA9|A Chain A, Structure Of Native Tcache After A 9 Seconds Annealing To
Room Temperature During The First 5 Seconds Of Which
Laser Irradiation At 266nm Took Place
pdb|2VA9|B Chain B, Structure Of Native Tcache After A 9 Seconds Annealing To
Room Temperature During The First 5 Seconds Of Which
Laser Irradiation At 266nm Took Place
pdb|2VJA|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 100k
pdb|2VJA|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 100k
pdb|2VJB|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset D At 100k
pdb|2VJB|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset D At 100k
pdb|2VJC|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-oxo-n,n,n-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 150k
pdb|2VJC|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-oxo-n,n,n-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 150k
pdb|2VJD|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset C At 150k
pdb|2VJD|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset C At 150k
pdb|2VT6|A Chain A, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 9400000 Gy
pdb|2VT6|B Chain B, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 9400000 Gy
pdb|2VT7|A Chain A, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 800000 Gy
pdb|2VT7|B Chain B, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 800000 Gy
pdb|2WFZ|A Chain A, Non-Aged Conjugate Of Torpedo Californica
Acetylcholinesterase With Soman
pdb|2WG0|A Chain A, Aged Conjugate Of Torpedo Californica Acetylcholinesterase
With Soman (Obtained By In Crystallo Aging)
pdb|2WG1|A Chain A, Ternary Complex Of The Aged Conjugate Of Torpedo
Californica Aceylcholinesterase With Soman And 2-Pam
pdb|2WG2|A Chain A, Non-Aged Conjugate Of Torpedo Californica
Acetylcholinesterase With Soman (Alternative Refinement)
pdb|2XI4|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
Aflatoxin B1 (Orthorhombic Space Group)
pdb|2XI4|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With
Aflatoxin B1 (Orthorhombic Space Group)
Length = 537
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQ----KFPDLSNKTAALQ 86
+ AFLG+P+A PPVG +R+ P W+G A C Q +FP S
Sbjct: 27 ISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSGSEMWNP 86
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
+ + SEDCL+LNI+VP
Sbjct: 87 NREM----------------SEDCLYLNIWVP 102
>pdb|2WID|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta1
pdb|2WIG|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta4
Length = 529
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V AFLG+PYA PP+G+LR+ WT A C Q Q P
Sbjct: 25 VTAFLGIPYAQPPLGRLRFKKPQSLTKWTDIWNATKYANSCCQNID---------QSFPG 75
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
++ L SEDCL+LN+++P
Sbjct: 76 FHGSEMWNPNTDL---SEDCLYLNVWIP 100
>pdb|2W6C|X Chain X, Ache In Complex With A Bis-(-)-Nor-Meptazinol Derivative
pdb|2W9I|A Chain A, Ache In Complex With Methylene Blue
Length = 586
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQ----KFPDLSNKTAALQ 86
+ AFLG+P+A PPVG +R+ P W+G A C Q +FP S
Sbjct: 48 ISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSGSEMWNP 107
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
+ + SEDCL+LNI+VP
Sbjct: 108 NREM----------------SEDCLYLNIWVP 123
>pdb|1DX4|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Phenylmethylamino)-1,2,3,4-Tetrahydroacridine
pdb|1QO9|A Chain A, Native Acetylcholinesterase From Drosophila Melanogaster
pdb|1QON|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Iodobenzylamino)-1,2,3,4-Tetrahydroacridine
Length = 585
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 20/97 (20%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQK----FPDLSNKTAALQ 86
V + G+PYA PPV LR+ P W G A L C Q+ FP S +
Sbjct: 26 VHVYTGIPYAKPPVEDLRFRKPVPAEPWHGVLDATGLSATCVQERYEYFPGFSGEEIWNP 85
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVPGSAQL 123
+ N SEDCL++N++ P A+L
Sbjct: 86 NT----------------NVSEDCLYINVWAPAKARL 106
>pdb|2WSL|A Chain A, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta4
pdb|1XLU|A Chain A, X-Ray Structure Of Di-Isopropyl-Phosphoro-Fluoridate (Dfp)
Inhibited Butyrylcholinesterase After Aging
pdb|1XLV|A Chain A, Ethylphosphorylated Butyrylcholinesterase (Aged) Obtained
By Reaction With Echothiophate
pdb|1XLW|A Chain A, Diethylphosphorylated Butyrylcholinesterase (Nonaged)
Obtained By Reaction With Echothiophate
Length = 529
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V AFLG+PYA PP+G+LR+ W+ A C Q Q P
Sbjct: 25 VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCXQNID---------QSFPG 75
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
++ L SEDCL+LN+++P
Sbjct: 76 FHGSEMWNPNTDL---SEDCLYLNVWIP 100
>pdb|2J4C|A Chain A, Structure Of Human Butyrylcholinesterase In Complex With
10mm Hgcl2
Length = 529
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V AFLG+PYA PP+G+LR+ W+ A C Q Q P
Sbjct: 25 VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCXQNID---------QSFPG 75
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
++ L SEDCL+LN+++P
Sbjct: 76 FHGSEMWNPNTDL---SEDCLYLNVWIP 100
>pdb|3O9M|A Chain A, Co-Crystallization Studies Of Full Length Recombinant Bche
With Cocaine Offers Insights Into Cocaine Detoxification
pdb|3O9M|B Chain B, Co-Crystallization Studies Of Full Length Recombinant Bche
With Cocaine Offers Insights Into Cocaine Detoxification
Length = 574
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 20/93 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWT----GTRLADALGPVCPQKFPDLSNKTAALQ 86
V AFLG+PYA PP+G+LR+ W+ T+ A++ Q FP
Sbjct: 25 VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCCQNIDQSFPGFHGS----- 79
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVPG 119
M + SEDCL+LN+++P
Sbjct: 80 -----------EMWNPNTDLSEDCLYLNVWIPA 101
>pdb|2PM8|A Chain A, Crystal Structure Of Recombinant Full Length Human
Butyrylcholinesterase
pdb|2PM8|B Chain B, Crystal Structure Of Recombinant Full Length Human
Butyrylcholinesterase
Length = 574
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 20/93 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWT----GTRLADALGPVCPQKFPDLSNKTAALQ 86
V AFLG+PYA PP+G+LR+ W+ T+ A++ Q FP
Sbjct: 25 VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCCQNIDQSFPGFHGS----- 79
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVPG 119
M + SEDCL+LN+++P
Sbjct: 80 -----------EMWNPNTDLSEDCLYLNVWIPA 101
>pdb|2WIF|A Chain A, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta1
pdb|2WIJ|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta5
pdb|2WIK|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta6
pdb|4BBZ|A Chain A, Structure Of Human Butyrylcholinesterase Inhibited By Cbdp
( 2-min Soak): Cresyl-phosphoserine Adduct
Length = 529
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V AFLG+PYA PP+G+LR+ W+ A C Q Q P
Sbjct: 25 VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCCQNID---------QSFPG 75
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
++ L SEDCL+LN+++P
Sbjct: 76 FHGSEMWNPNTDL---SEDCLYLNVWIP 100
>pdb|2Y1K|A Chain A, Structure Of Human Butyrylcholinesterase Inhibited By Cbdp
( 12h Soak): Phosphoserine Adduct
Length = 529
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V AFLG+PYA PP+G+LR+ W+ A C Q Q P
Sbjct: 25 VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCCQNID---------QSFPG 75
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
++ L SEDCL+LN+++P
Sbjct: 76 FHGSEMWNPNTDL---SEDCLYLNVWIP 100
>pdb|2XQF|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Racemic Vx
pdb|2XQG|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Racemic Vr
pdb|2XQI|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Racemic Cvx
pdb|2XQJ|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Pure Enantiomer Vx-(R)
pdb|2XQK|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Pure Enantiomer Vx-(S)
Length = 527
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V AFLG+PYA PP+G+LR+ W+ A C Q Q P
Sbjct: 23 VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCCQNID---------QSFPG 73
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
++ L SEDCL+LN+++P
Sbjct: 74 FHGSEMWNPNTDL---SEDCLYLNVWIP 98
>pdb|4B0O|A Chain A, Crystal Structure Of Soman-Aged Human
Butyrylcholinesterase In Complex With Benzyl
Pyridinium-4-Methyltrichloroacetimidate
pdb|4B0P|A Chain A, Crystal Structure Of Soman-Aged Human
Butyrylcholinesterase In Complex With Methyl
2-(Pentafluorobenzyloxyimino) Pyridinium
Length = 529
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V AFLG+PYA PP+G+LR+ W+ A C Q Q P
Sbjct: 25 VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCCQNID---------QSFPG 75
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
++ L SEDCL+LN+++P
Sbjct: 76 FHGSEMWNPNTDL---SEDCLYLNVWIP 100
>pdb|4AXB|A Chain A, Crystal Structure Of Soman-aged Human
Butyrylcholinesterase In Complex With 2-pam
Length = 527
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V AFLG+PYA PP+G+LR+ W+ A C Q Q P
Sbjct: 23 VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCCQNID---------QSFPG 73
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
++ L SEDCL+LN+++P
Sbjct: 74 FHGSEMWNPNTDL---SEDCLYLNVWIP 98
>pdb|3DJY|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun
pdb|3DKK|A Chain A, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun
Length = 529
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V AFLG+PYA PP+G+LR+ W+ A C Q Q P
Sbjct: 25 VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCCQNID---------QSFPG 75
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
++ L SEDCL+LN+++P
Sbjct: 76 FHGSEMWNPNTDL---SEDCLYLNVWIP 100
>pdb|1P0I|A Chain A, Crystal Structure Of Human Butyryl Cholinesterase
pdb|1P0M|A Chain A, Crystal Structure Of Human Butyryl Cholinesterase In
Complex With A Choline Molecule
pdb|1P0P|A Chain A, Crystal Structure Of Soman-Aged Human Butyryl
Cholinesterase In Complex With The Substrate Analog
Butyrylthiocholine
pdb|1P0Q|A Chain A, Crystal Structure Of Soman-Aged Human Butyryl
Cholinesterase
Length = 529
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V AFLG+PYA PP+G+LR+ W+ A C Q Q P
Sbjct: 25 VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCCQNID---------QSFPG 75
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
++ L SEDCL+LN+++P
Sbjct: 76 FHGSEMWNPNTDL---SEDCLYLNVWIP 100
>pdb|2XMB|A Chain A, G117h Mutant Of Human Butyrylcholinesterase In Complex
With Sulfate
pdb|2XMC|A Chain A, G117h Mutant Of Human Butyrylcholinesterase In Complex
With Fluoride Anion
pdb|2XMD|A Chain A, G117h Mutant Of Human Butyrylcholinesterase In Complex
With Echothiophate
pdb|2XMG|A Chain A, G117h Mutant Of Human Butyrylcholinesterase In Complex
With Vx
Length = 529
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V AFLG+PYA PP+G+LR+ W+ A C Q Q P
Sbjct: 25 VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCCQNID---------QSFPG 75
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
++ L SEDCL+LN+++P
Sbjct: 76 FHGSEMWNPNTDL---SEDCLYLNVWIP 100
>pdb|4AQD|A Chain A, Crystal Structure Of Fully Glycosylated Human
Butyrylcholinesterase
pdb|4AQD|B Chain B, Crystal Structure Of Fully Glycosylated Human
Butyrylcholinesterase
Length = 531
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 20/93 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWT----GTRLADALGPVCPQKFPDLSNKTAALQ 86
V AFLG+PYA PP+G+LR+ W+ T+ A++ Q FP
Sbjct: 27 VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCCQNIDQSFPGFHGS----- 81
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVPG 119
M + SEDCL+LN+++P
Sbjct: 82 -----------EMWNPNTDLSEDCLYLNVWIPA 103
>pdb|2WIL|A Chain A, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta5
pdb|2WIL|B Chain B, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta5
Length = 529
Score = 46.6 bits (109), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 20/93 (21%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWT----GTRLADALGPVCPQKFPDLSNKTAALQ 86
V AFLG+PYA PP+G+LR+ W+ T+ A++ Q FP
Sbjct: 25 VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCCQNIDQSFPGFHGS----- 79
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVPG 119
M + SEDCL+LN+++P
Sbjct: 80 -----------EMWNPNTDLSEDCLYLNVWIPA 101
>pdb|1LLF|A Chain A, Cholesterol Esterase (Candida Cylindracea) Crystal
Structure At 1.4a Resolution
pdb|1LLF|B Chain B, Cholesterol Esterase (Candida Cylindracea) Crystal
Structure At 1.4a Resolution
Length = 534
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 32 EAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLS-----NKTAALQ 86
EAFLG+P+A PPVG LR+ P + + GP C Q+ P+ + KTA
Sbjct: 21 EAFLGIPFAEPPVGNLRFKDPVPYSGSLNGQKFTSYGPSCMQQNPEGTFEENLGKTALDL 80
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
M +Q +L SEDCL +N+ P
Sbjct: 81 VMQSKVFQAVLPQ-------SEDCLTINVVRP 105
>pdb|1CLE|A Chain A, Structure Of Uncomplexed And Linoleate-Bound Candida
Cylindracea Cholesterol Esterase
pdb|1CLE|B Chain B, Structure Of Uncomplexed And Linoleate-Bound Candida
Cylindracea Cholesterol Esterase
Length = 534
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 32 EAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLS-----NKTAALQ 86
EAFLG+P+A PPVG LR+ P + + GP C Q+ P+ + KTA
Sbjct: 21 EAFLGIPFAEPPVGNLRFKDPVPYSGSLNGQKFTSYGPSCMQQNPEGTFEENLGKTALDL 80
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
M +Q +L SEDCL +N+ P
Sbjct: 81 VMQSKVFQAVLPQ-------SEDCLTINVVRP 105
>pdb|1LPM|A Chain A, A Structural Basis For The Chiral Preferences Of Lipases
pdb|1LPN|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPO|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPP|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPS|A Chain A, A Structural Basis For The Chiral Preferences Of Lipases
Length = 549
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 32 EAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPVG 91
EAFLG+P+A PPVG LR+ P + + GP C Q+ P+ + + +++P
Sbjct: 36 EAFLGIPFAEPPVGNLRFKDPVPYSGSLDGQKFTSYGPSCMQQNPEGTYE----ENLPKA 91
Query: 92 RYQQLLRMEPY--LGNYSEDCLHLNIYVP 118
+++ + + + SEDCL +N+ P
Sbjct: 92 ALDLVMQSKVFEAVSPSSEDCLTINVVRP 120
>pdb|1CRL|A Chain A, Insights Into Interfacial Activation From An 'open'
Structure Of Candida Rugosa Lipase
pdb|1TRH|A Chain A, Two Conformational States Of Candida Rugosa Lipase
pdb|3RAR|A Chain A, X-Ray Structure Of A Bound Phosphonate Transition State
Analog And Enantioselectivity Of Candida Rugosa Lipase
Toward Chiral Carboxylic Acids
Length = 534
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 32 EAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPVG 91
EAFLG+P+A PPVG LR+ P + + GP C Q+ P+ + + +++P
Sbjct: 21 EAFLGIPFAEPPVGNLRFKDPVPYSGSLDGQKFTSYGPSCMQQNPEGTYE----ENLPKA 76
Query: 92 RYQQLLRMEPY--LGNYSEDCLHLNIYVP 118
+++ + + + SEDCL +N+ P
Sbjct: 77 ALDLVMQSKVFEAVSPSSEDCLTINVVRP 105
>pdb|2FJ0|A Chain A, Crystal Structure Of Juvenile Hormone Esterase From
Manduca Sexta, With Otfp Covalently Attached
Length = 551
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 19/86 (22%)
Query: 33 AFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPVGR 92
+F GVPYA P+G+LR+ P W A GPVC Q T L
Sbjct: 32 SFRGVPYAKQPLGELRFKELQPLEPWQDELDATQEGPVCQQ--------TDVL------- 76
Query: 93 YQQLLRMEPYLGNYSEDCLHLNIYVP 118
Y +++R SE C+H NI+VP
Sbjct: 77 YGRIMRPR----GMSEACIHANIHVP 98
>pdb|1GZ7|A Chain A, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|B Chain B, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|C Chain C, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|D Chain D, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
Length = 534
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Query: 32 EAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQ-----KFPDLSNKTAALQ 86
E FLG+P+A PPVG LR+ P P + + GP C Q F D K A
Sbjct: 21 EKFLGIPFAEPPVGTLRFKPPVPYSASLNGQQFTSYGPSCMQMNPMGSFEDTLPKNALDL 80
Query: 87 HMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
+ +Q +L + EDCL +N+ P
Sbjct: 81 VLQSKIFQVVLPND-------EDCLTINVIRP 105
>pdb|1THG|A Chain A, 1.8 Angstroms Refined Structure Of The Lipase From
Geotrichum Candidum
Length = 544
Score = 38.5 bits (88), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFP----DLSNKTAALQ 86
V+ F G+P+A PP+ LR+ P A+ P C Q P L +K L
Sbjct: 21 VDTFKGIPFADPPLNDLRFKHPQPFTGSYQGLKANDFSPACMQLDPGNSLTLLDKALGLA 80
Query: 87 HMPVGRYQQ-LLRMEPYLGNYSEDCLHLNIYVPGSAQ 122
+ ++ L M + +EDCL+LN++ P +
Sbjct: 81 KVIPEEFRGPLYDMAKGTVSMNEDCLYLNVFRPAGTK 117
>pdb|2BCE|A Chain A, Cholesterol Esterase From Bos Taurus
Length = 579
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 26/90 (28%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
+ V+ F G+P+AA P + P P W GT A + C
Sbjct: 25 DSVDIFKGIPFAAAPKALEK--PERHP-GWQGTLKAKSFKKRC----------------- 64
Query: 89 PVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
Q L + GN EDCL+LNI+VP
Sbjct: 65 ----LQATLTQDSTYGN--EDCLYLNIWVP 88
>pdb|1AQL|A Chain A, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
pdb|1AQL|B Chain B, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
Length = 532
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 26/90 (28%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
+ ++ F G+P+AA P + P P W GT A + C
Sbjct: 25 DSIDIFKGIPFAAAPKALEK--PERHP-GWQGTLKAKSFKKRC----------------- 64
Query: 89 PVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
Q L + GN EDCL+LNI+VP
Sbjct: 65 ----LQATLTQDSTYGN--EDCLYLNIWVP 88
>pdb|1AKN|A Chain A, Structure Of Bile-salt Activated Lipase
Length = 579
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 26/90 (28%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
+ ++ F G+P+AA P + P P W GT A + C
Sbjct: 25 DSIDIFKGIPFAAAPKALEK--PERHP-GWQGTLKAKSFKKRC----------------- 64
Query: 89 PVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
Q L + GN EDCL+LNI+VP
Sbjct: 65 ----LQATLTQDSTYGN--EDCLYLNIWVP 88
>pdb|2HZ8|A Chain A, QmMM STRUCTURE REFINED FROM NMR-Structure Of A Single
Chain Diiron Protein
Length = 115
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 6 KMGNTVSFSTGFQIILEPNSRHLEPVE 32
K GN F++ Q IL+ RH+E +E
Sbjct: 86 KQGNAEQFASLVQQILQDEQRHVEEIE 112
>pdb|1F6W|A Chain A, Structure Of The Catalytic Domain Of Human Bile Salt
Activated Lipase
Length = 533
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 33/90 (36%), Gaps = 26/90 (28%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
+ V+ F G+P+AAP P W GT A C
Sbjct: 25 DSVDIFKGIPFAAPTKA---LENPQPHPGWQGTLKAKNFKKRC----------------- 64
Query: 89 PVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
Q + + G+ EDCL+LNI+VP
Sbjct: 65 ----LQATITQDSTYGD--EDCLYLNIWVP 88
>pdb|1JMY|A Chain A, Truncated Recombinant Human Bile Salt Stimulated Lipase
Length = 522
Score = 28.1 bits (61), Expect = 1.5, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 33/90 (36%), Gaps = 26/90 (28%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
+ V+ F G+P+AAP P W GT A C
Sbjct: 25 DSVDIFKGIPFAAPTKA---LENPQPHPGWQGTLKAKNFKKRC----------------- 64
Query: 89 PVGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
Q + + G+ EDCL+LNI+VP
Sbjct: 65 ----LQATITQDSTYGD--EDCLYLNIWVP 88
>pdb|2P3X|A Chain A, Crystal Structure Of Grenache (Vitis Vinifera) Polyphenol
Oxidase
Length = 339
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 7/37 (18%)
Query: 34 FLGVPYAA-----PPVGQLRYAPANPPLNWTGTRLAD 65
FLG PY A P G L +AP N WTG LAD
Sbjct: 216 FLGYPYRAGDAIDPGAGTLEHAPHNIVHKWTG--LAD 250
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,918,344
Number of Sequences: 62578
Number of extensions: 150556
Number of successful extensions: 388
Number of sequences better than 100.0: 82
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 238
Number of HSP's gapped (non-prelim): 82
length of query: 123
length of database: 14,973,337
effective HSP length: 85
effective length of query: 38
effective length of database: 9,654,207
effective search space: 366859866
effective search space used: 366859866
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)