RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6008
(123 letters)
>d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus
(Geotrichum candidum), ATCC 34614 [TaxId: 27317]}
Length = 544
Score = 94.8 bits (234), Expect = 2e-24
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPD-----LSNKTAA 84
V+ F G+P+A PP+ LR+ P A+ P C Q P L
Sbjct: 20 KVDTFKGIPFADPPLNDLRFKHPQPFTGSYQGLKANDFSPACMQLDPGNSLTLLDKALGL 79
Query: 85 LQHMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVPGSAQ 122
+ +P L M + +EDCL+LN++ P +
Sbjct: 80 AKVIPEEFRGPLYDMAKGTVSMNEDCLYLNVFRPAGTK 117
>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 571
Score = 93.7 bits (231), Expect = 4e-24
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 12/95 (12%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
V + G+PYA PPV LR+ P W G A L C Q+ + +
Sbjct: 22 REVHVYTGIPYAKPPVEDLRFRKPVPAEPWHGVLDATGLSATCVQERYEYFPGFSG---- 77
Query: 89 PVGRYQQLLRMEPYLGNYSEDCLHLNIYVPGSAQL 123
+ N SEDCL++N++ P A+L
Sbjct: 78 --------EEIWNPNTNVSEDCLYINVWAPAKARL 104
>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida
cylindracea, cholesterol esterase [TaxId: 44322]}
Length = 534
Score = 91.4 bits (225), Expect = 2e-23
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
EAFLG+P+A PPVG LR+ P + + GP C Q+ P+ +
Sbjct: 20 NEAFLGIPFAEPPVGNLRFKDPVPYSGSLNGQKFTSYGPSCMQQNPEGT--FEENLGKTA 77
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVPGSAQ 122
++ + SEDCL +N+ P +
Sbjct: 78 LDLVMQSKVFQAVLPQSEDCLTINVVRPPGTK 109
>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 542
Score = 91.0 bits (224), Expect = 4e-23
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
PV AFLG+P+A PPVG R+ P P W+G A VC Q L +
Sbjct: 28 PVSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLDATTFQNVCYQYVDTLYPGFEGTEMWN 87
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVP 118
R SEDCL+LN++ P
Sbjct: 88 PNR------------ELSEDCLYLNVWTP 104
>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver
carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]}
Length = 532
Score = 90.2 bits (222), Expect = 6e-23
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
+PV FLG+P+A PP+G LR+ P P W+ + A + P+C Q + +
Sbjct: 25 QPVAIFLGIPFAKPPLGPLRFTPPQPAEPWSFVKNATSYPPMCTQDPKAGQLLSELFTN- 83
Query: 89 PVGRYQQLLRMEPYLGNYSEDCLHLNIYVPGSA 121
R E SEDCL+LNIY P
Sbjct: 84 ---------RKENIPLKLSEDCLYLNIYTPADL 107
>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray
(Torpedo californica) [TaxId: 7787]}
Length = 532
Score = 89.0 bits (219), Expect = 2e-22
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
+ AFLG+P+A PPVG +R+ P W+G A C Q + + +
Sbjct: 22 SHISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWNASTYPNNCQQYVDEQFPGFSGSEMW 81
Query: 89 PVGRYQQLLRMEPYLGNYSEDCLHLNIYVPGSA 121
R SEDCL+LNI+VP
Sbjct: 82 NPNR------------EMSEDCLYLNIWVPSPR 102
>d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 526
Score = 87.9 bits (216), Expect = 4e-22
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 12/92 (13%)
Query: 30 PVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMP 89
V AFLG+PYA PP+G+LR+ W+ A C Q +
Sbjct: 21 TVTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWNATKYANSCCQNIDQSFPGFHGSE--- 77
Query: 90 VGRYQQLLRMEPYLGNYSEDCLHLNIYVPGSA 121
M + SEDCL+LN+++P
Sbjct: 78 ---------MWNPNTDLSEDCLYLNVWIPAPK 100
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB
esterase) {Bacillus subtilis [TaxId: 1423]}
Length = 483
Score = 87.4 bits (215), Expect = 5e-22
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 18/93 (19%)
Query: 29 EPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
V + G+PYA PPVGQ R+ PP W A A GP+CPQ LS
Sbjct: 18 NGVHKWKGIPYAKPPVGQWRFKAPEPPEVWEDVLDATAYGPICPQPSDLLSL-------- 69
Query: 89 PVGRYQQLLRMEPYLGNYSEDCLHLNIYVPGSA 121
L SEDCL++N++ P +
Sbjct: 70 ----------SYTELPRQSEDCLYVNVFAPDTP 92
>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId:
5061]}
Length = 517
Score = 84.5 bits (207), Expect = 7e-21
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 23/91 (25%)
Query: 31 VEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLSNKTAALQHMPV 90
V+ FLG+ YA+PP+G LR+ P + A GP+C
Sbjct: 24 VDEFLGMRYASPPIGDLRFRAPQDPPANQTLQSATEYGPICIG----------------- 66
Query: 91 GRYQQLLRMEPYLGNYSEDCLHLNIYVPGSA 121
L E G+ SEDCL +N++ P +A
Sbjct: 67 ------LDEEESPGDISEDCLFINVFKPSTA 91
>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol
esterase) {Cow (Bos taurus) [TaxId: 9913]}
Length = 579
Score = 72.4 bits (176), Expect = 1e-16
Identities = 23/102 (22%), Positives = 34/102 (33%), Gaps = 26/102 (25%)
Query: 20 ILEPNSRHLEPVEAFLGVPYAAPPVGQLRYAPANPPLNWTGTRLADALGPVCPQKFPDLS 79
+ + S + V+ F G+P+AA P W GT A + C Q
Sbjct: 16 VNKKLSLFGDSVDIFKGIPFAAAPKA---LEKPERHPGWQGTLKAKSFKKRCLQA----- 67
Query: 80 NKTAALQHMPVGRYQQLLRMEPYLGNYSEDCLHLNIYVPGSA 121
+ +EDCL+LNI+VP
Sbjct: 68 ------------------TLTQDSTYGNEDCLYLNIWVPQGR 91
>d1q9ca_ a.22.1.3 (A:) Histone domain of Son of sevenless protein
{Human (Homo sapiens) [TaxId: 9606]}
Length = 172
Score = 27.1 bits (60), Expect = 0.47
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 58 WTGTRLADALGPVCPQKFPDLSNKTAALQHM 88
W G L AL V Q P L + ALQ++
Sbjct: 14 WRG-LLVPALKKVQGQVHPTLESNDDALQYV 43
>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia,
lectin I-b4 [TaxId: 3850]}
Length = 236
Score = 24.6 bits (53), Expect = 3.6
Identities = 8/36 (22%), Positives = 11/36 (30%)
Query: 8 GNTVSFSTGFQIILEPNSRHLEPVEAFLGVPYAAPP 43
+ SF T F L+ AF P +
Sbjct: 63 ESVASFYTEFTFFLKITGNGPADGLAFFLAPPDSDV 98
>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume
(Griffonia simplicifolia) [TaxId: 3850]}
Length = 243
Score = 24.3 bits (52), Expect = 4.6
Identities = 9/43 (20%), Positives = 16/43 (37%)
Query: 1 MYIQEKMGNTVSFSTGFQIILEPNSRHLEPVEAFLGVPYAAPP 43
+++ + G SF T F +L+ AF P +
Sbjct: 60 VFLWDSTGKAASFYTSFTFLLKNYGAPTADGLAFFLAPVDSSV 102
>d2akza1 c.1.11.1 (A:140-433) Enolase {Human (Homo sapiens), gamma
isoform [TaxId: 9606]}
Length = 294
Score = 23.8 bits (51), Expect = 7.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 90 VGRYQQLLRMEPYLGN 105
+ +Y QL+R+E LG+
Sbjct: 264 LAKYNQLMRIEEELGD 279
>d3brja1 a.285.1.1 (A:6-172) Mannitol operon repressor MtlR {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 167
Score = 23.6 bits (51), Expect = 8.3
Identities = 3/31 (9%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 69 PVCPQKFPDL-SNKTAALQHMPVGRYQQLLR 98
+ + + + + + R QQ+++
Sbjct: 121 GMVQLEVNEPDDDIDLEFYQLQLQRQQQIIK 151
>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus),
UEA-II [TaxId: 3902]}
Length = 237
Score = 23.5 bits (50), Expect = 9.4
Identities = 7/35 (20%), Positives = 13/35 (37%)
Query: 9 NTVSFSTGFQIILEPNSRHLEPVEAFLGVPYAAPP 43
SF+T F +++ + AF P +
Sbjct: 63 KVASFATSFSFVVKADKSDGVDGLAFFLAPANSQI 97
>d2al1a1 c.1.11.1 (A:142-436) Enolase {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 295
Score = 23.4 bits (50), Expect = 9.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 90 VGRYQQLLRMEPYLGN 105
+ + QLLR+E LG+
Sbjct: 265 LAKLNQLLRIEEELGD 280
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.429
Gapped
Lambda K H
0.267 0.0639 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 457,034
Number of extensions: 19132
Number of successful extensions: 47
Number of sequences better than 10.0: 1
Number of HSP's gapped: 37
Number of HSP's successfully gapped: 18
Length of query: 123
Length of database: 2,407,596
Length adjustment: 75
Effective length of query: 48
Effective length of database: 1,377,846
Effective search space: 66136608
Effective search space used: 66136608
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.1 bits)