BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6009
(866 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|350409594|ref|XP_003488787.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like [Bombus impatiens]
Length = 2588
Score = 874 bits (2259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/831 (56%), Positives = 569/831 (68%), Gaps = 138/831 (16%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FPV KL +L KISS RWVVPVLPEQELECL++A+I+LCK DV SE CQRFFREGL+I
Sbjct: 70 FPVAKLNMLHEKISSPRWVVPVLPEQELECLLQASIDLCKKGIDVQSEACQRFFREGLTI 129
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTDDAV SWK NI NCI NC++L++L +LKL +D FPLLD+L MVFNP NKFHT
Sbjct: 130 SFTKILTDDAVSSWKMNIQNCINANCERLVDLCILKLDEDWFPLLDLLAMVFNPSNKFHT 189
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
FN+ + S +VP S+I D++++ARP ++ RGWLVDLIN FGS+ GF+ILL RFQ+
Sbjct: 190 FNAARVSETVPPGSDIPDEQLYARPPPDSRSPRGWLVDLINRFGSLNGFEILLSRFQSGR 249
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
LT+PVI+ALIRPFG +E LT+ TI+KY MPI+E
Sbjct: 250 NLTVPVIYALIRPFGLCYELLTVHTIVKYLMPIVE------------------------- 284
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP IL NLTDEELKKEAKNESKNDAIS IIK+ K L
Sbjct: 285 -----------------------MVPVILNNLTDEELKKEAKNESKNDAISAIIKAAKCL 321
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
+RVPHQE+ +K L I RLK+ILRLLQISSFNGKMNALNEVNKVIA V++Y HR+ E
Sbjct: 322 VSRVPHQEEMIKNLGILRLKMILRLLQISSFNGKMNALNEVNKVIATVSFYQHRNAIVEE 381
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT + MAKWIK+N VLEIVLRDSLHQPQYVEKLEKILRF+IKE+AL+L DLDAVWAA
Sbjct: 382 EEWLTAECMAKWIKENGVLEIVLRDSLHQPQYVEKLEKILRFIIKERALTLEDLDAVWAA 441
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CFQ SW +AN+KQ EKLLELIRRLAED
Sbjct: 442 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFECFQMSWKTANKKQGEKLLELIRRLAED 501
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVL LFW+LAHSD+V T+IM+QAL +H+KILDYSCSQERD QKTIWL C+E
Sbjct: 502 DKDGVMAHKVLTLFWNLAHSDEVPTEIMDQALNAHVKILDYSCSQERDAQKTIWLDKCVE 561
Query: 572 EFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
E K++ KW +PAL+QI++ICCLYEP N+ H R+H + RQ +I+ L HS ++
Sbjct: 562 ELKNSDKWALPALKQIREICCLYEPNPNIACHG---QRNH--HYRQDVIERLQAEHSAVI 616
Query: 632 LITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY-----YPHRHPEEE------------ 674
L+TN+L +++ KM L + N I G Y Y H +E
Sbjct: 617 LVTNSL------TNYMDKMRQLVKENPDIDGNTYMHDGRYNHIMQVQERLNFLRFLLKDG 670
Query: 675 --WLTPDRQ------LTESGL------KCFEKF--------------------------- 693
WL D+ L E G+ CF+ F
Sbjct: 671 QLWLCADQAEQIWQCLAEQGVFVSDREACFKWFSKLMGDEPDLDPAINKDFFQNNILQLD 730
Query: 694 ---------------FKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIA 738
FK+VN EGK LK+K+R+ L+D+ DLIG +YLWRV+TN+ E+IA
Sbjct: 731 PTLLTESGIKCYERFFKAVNSKEGK--LKLKRRTFLMDDVDLIGTDYLWRVVTNSPEEIA 788
Query: 739 FRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIG-LSHTY 788
RAI+LLKEV+T+LGP+LQSS+ FH T+I EC+DRL+AHYDT+ LS Y
Sbjct: 789 NRAIELLKEVNTNLGPRLQSSVLAFHVTYIGECMDRLKAHYDTVSVLSKVY 839
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A QIW LA++ +F DREACFKWFSKLM DEPDLDP + KDFF+ ++L +P
Sbjct: 678 QAEQIWQCLAEQGVFVSDREACFKWFSKLMGDEPDLDPAINKDFFQNNILQLDP 731
>gi|340713827|ref|XP_003395437.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 1 [Bombus terrestris]
gi|340713829|ref|XP_003395438.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 2 [Bombus terrestris]
Length = 2588
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/831 (56%), Positives = 569/831 (68%), Gaps = 138/831 (16%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FPV KL +L KISS RWVVPVLPEQELECL++A+I+LCK DV SE CQRFFREGL+I
Sbjct: 70 FPVAKLNMLHEKISSPRWVVPVLPEQELECLLQASIDLCKKGIDVQSEACQRFFREGLTI 129
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTDDAV SWK NI NCI NC++L++L +LKL +D FPLLD+L MVFNP NKFHT
Sbjct: 130 SFTKILTDDAVSSWKMNIQNCINANCERLVDLCILKLDEDWFPLLDLLAMVFNPSNKFHT 189
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
FN+ + S +VP S+I D++++ARP ++ RGWLVDLIN FGS+ GF+ILL RFQ+
Sbjct: 190 FNAARVSETVPPGSDIPDEQLYARPPPDSRSPRGWLVDLINRFGSLNGFEILLSRFQSGR 249
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
LT+PVI+ALIRPFG +E LT+ TI+KY MPI+E
Sbjct: 250 NLTVPVIYALIRPFGLCYELLTVHTIVKYLMPIVE------------------------- 284
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP IL NLTDEELKKEAKNESKNDAIS IIK+ K L
Sbjct: 285 -----------------------MVPVILNNLTDEELKKEAKNESKNDAISAIIKAAKCL 321
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
+RVPHQE+ +K L I RLK+ILRLLQISSFNGKMNALNEVNKVIA V++Y HR+ E
Sbjct: 322 VSRVPHQEEIIKNLGILRLKMILRLLQISSFNGKMNALNEVNKVIATVSFYQHRNAIVEE 381
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT + MAKWIK+N VLEIVLRDSLHQPQYVEKLEKILRF+IKE+AL+L DLDAVWAA
Sbjct: 382 EEWLTAECMAKWIKENGVLEIVLRDSLHQPQYVEKLEKILRFIIKERALTLEDLDAVWAA 441
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CFQ SW +AN+KQ EKLLELIRRLAED
Sbjct: 442 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFECFQMSWKTANKKQGEKLLELIRRLAED 501
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVL LFW+LAHSD+V T+IM+QAL +H+KILDYSCSQERD QKTIWL C+E
Sbjct: 502 DKDGVMAHKVLTLFWNLAHSDEVPTEIMDQALNAHVKILDYSCSQERDAQKTIWLDKCVE 561
Query: 572 EFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
E K++ KW +PAL+QI++ICCLYEP N+ H R+H + RQ +I+ L HS ++
Sbjct: 562 ELKNSDKWALPALKQIREICCLYEPNPNIACHG---QRNH--HYRQDVIERLQAEHSAVI 616
Query: 632 LITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY-----YPHRHPEEE------------ 674
L+TN+L +++ KM L + N + G Y Y H +E
Sbjct: 617 LVTNSL------TNYMDKMRQLVKENPDVDGNTYMHDGRYNHIMQVQERLNFLRFLLKDG 670
Query: 675 --WLTPDRQ------LTESGL------KCFEKF--------------------------- 693
WL D+ L E G+ CF+ F
Sbjct: 671 QLWLCADQAEQIWQCLAEQGVFVSDREACFKWFSKLMGDEPDLDPAINKDFFQNNILQLD 730
Query: 694 ---------------FKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIA 738
FK+VN EGK LK+K+R+ L+D+ DLIG +YLWRV+TN+ E+IA
Sbjct: 731 PTLLTESGIKCYERFFKAVNSKEGK--LKLKRRTFLMDDVDLIGTDYLWRVVTNSPEEIA 788
Query: 739 FRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIG-LSHTY 788
RAI+LLKEV+T+LGP+LQSS+ FH T+I EC+DRL+AHYDT+ LS Y
Sbjct: 789 NRAIELLKEVNTNLGPRLQSSVLAFHVTYIGECMDRLKAHYDTVSVLSKVY 839
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A QIW LA++ +F DREACFKWFSKLM DEPDLDP + KDFF+ ++L +P
Sbjct: 678 QAEQIWQCLAEQGVFVSDREACFKWFSKLMGDEPDLDPAINKDFFQNNILQLDP 731
>gi|328781722|ref|XP_395447.4| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
[Apis mellifera]
Length = 2588
Score = 874 bits (2257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/827 (56%), Positives = 569/827 (68%), Gaps = 130/827 (15%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FPV KL +L KISS RWVVPVLPEQELECL++A+I+LCK DV SE CQRFFREGL+I
Sbjct: 70 FPVAKLNMLHEKISSPRWVVPVLPEQELECLLQASIDLCKKGIDVQSEACQRFFREGLTI 129
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTDDAV SWK NI NCI NC++L++L +LKL +D FPLLD+L MVFNP NKFHT
Sbjct: 130 SFTKILTDDAVSSWKMNIQNCINANCERLVDLCILKLDEDWFPLLDLLAMVFNPSNKFHT 189
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
FN+ + S +VP S+I D++++ARP ++ RGWLVDLIN FGS+ GF+ILL RFQN
Sbjct: 190 FNAARVSETVPPGSDIPDEQLYARPPPDSRSPRGWLVDLINRFGSLNGFEILLSRFQNGR 249
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
LT+PVI+ALIRPFG +E LT+ TI+KY MPI+E
Sbjct: 250 NLTVPVIYALIRPFGLCYELLTVHTIVKYLMPIVE------------------------- 284
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP IL NLTDEELKKEAKNESKNDAIS IIK+ K L
Sbjct: 285 -----------------------MVPVILNNLTDEELKKEAKNESKNDAISAIIKAAKCL 321
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
+RVPHQE+ +K L I RLK+ILRLLQISSFNGKMNALNEVNKVIA V++Y HR+ E
Sbjct: 322 VSRVPHQEEMIKNLGILRLKMILRLLQISSFNGKMNALNEVNKVIATVSFYQHRNAIVEE 381
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT + MAKWIK+N VLEIVLRDSLHQPQYVEKLEKILRF+IKE+AL+L DLDAVWAA
Sbjct: 382 EEWLTAECMAKWIKENGVLEIVLRDSLHQPQYVEKLEKILRFIIKERALTLEDLDAVWAA 441
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CFQ SW +AN+KQ EKLLELIRRLAED
Sbjct: 442 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFECFQMSWKTANKKQGEKLLELIRRLAED 501
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVL LFW+LAHSD+V T+IM+QAL +H+KILDYSCSQERD QKTIWL C+E
Sbjct: 502 DKDGVMAHKVLTLFWNLAHSDEVPTEIMDQALNAHVKILDYSCSQERDAQKTIWLDKCVE 561
Query: 572 EFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
E K++ KW +PAL+QI++ICCLYEP N+ H R+H + RQ +I+ L HS ++
Sbjct: 562 ELKNSDKWALPALKQIREICCLYEPNPNIACHG---QRNH--HYRQDVIERLQAEHSAVI 616
Query: 632 LITNNLCSLL---------------QISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWL 676
L+TN+L + + I +G+ N + +V + + + + + WL
Sbjct: 617 LVTNSLTNYMDKMRQLVKENPDIDANIYMHDGRYNHIMQVQERLNFLRFL--LKDGQLWL 674
Query: 677 TPDRQ------LTESGL------KCFEKF------------------------------- 693
D+ L E G+ CF+ F
Sbjct: 675 CADQAEQIWQCLAEQGVFVSDREACFKWFSKLMGDEPDLDPAINKDFFQNNILQLDPTLL 734
Query: 694 -----------FKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRAI 742
FK+VN EGK LK+K+R+ L+D+ DLIG +YLWRV+TN+ E+IA RAI
Sbjct: 735 TESGIKCYERFFKAVNSKEGK--LKLKRRTFLMDDVDLIGTDYLWRVVTNSPEEIANRAI 792
Query: 743 DLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIG-LSHTY 788
+LLKEV+T+LGP+LQSS+ FH T+I EC+DRL+AHYDT+ LS Y
Sbjct: 793 ELLKEVNTNLGPRLQSSVLAFHVTYIGECMDRLKAHYDTVSVLSKVY 839
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A QIW LA++ +F DREACFKWFSKLM DEPDLDP + KDFF+ ++L +P
Sbjct: 678 QAEQIWQCLAEQGVFVSDREACFKWFSKLMGDEPDLDPAINKDFFQNNILQLDP 731
>gi|380024961|ref|XP_003696253.1| PREDICTED: LOW QUALITY PROTEIN: probable ubiquitin
carboxyl-terminal hydrolase FAF-X-like [Apis florea]
Length = 2588
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/827 (56%), Positives = 568/827 (68%), Gaps = 130/827 (15%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FPV KL +L KISS RWVVPVLPEQELECL++A+I+LCK DV SE CQRFFREGL+I
Sbjct: 70 FPVAKLNMLHEKISSPRWVVPVLPEQELECLLQASIDLCKKGIDVQSEACQRFFREGLTI 129
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTDDAV SWK NI NCI NC++L++L +LKL +D FPLLD+L MVFNP NKFHT
Sbjct: 130 SFTKILTDDAVSSWKMNIQNCINANCERLVDLCILKLDEDWFPLLDLLAMVFNPSNKFHT 189
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
FN+ + S +VP S+I D++++ARP ++ RGWLVDLIN FGS+ GF+ILL RFQN
Sbjct: 190 FNAARVSETVPPGSDIPDEQLYARPPPDSRSPRGWLVDLINRFGSLNGFEILLSRFQNGR 249
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
LT+PVI+ALIRPFG +E LT+ TI+KY MPI+E
Sbjct: 250 NLTVPVIYALIRPFGLCYELLTVHTIIKYLMPIVE------------------------- 284
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP IL NLTDEELKKEAKNESKNDAIS IIK+ K L
Sbjct: 285 -----------------------MVPVILNNLTDEELKKEAKNESKNDAISAIIKAAKCL 321
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
+RVPHQE+ +K L I RLK+ILRLLQISSFNGKMNALNEVNKVIA V++Y HR+ E
Sbjct: 322 VSRVPHQEEMIKNLGILRLKMILRLLQISSFNGKMNALNEVNKVIATVSFYQHRNAIVEE 381
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT + MAKWIK+N VLEIVLRDSLHQPQYVEKLEKILRF+IKE+AL+L DLDAVWAA
Sbjct: 382 EEWLTAECMAKWIKENGVLEIVLRDSLHQPQYVEKLEKILRFIIKERALTLEDLDAVWAA 441
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CFQ SW +AN+KQ EKLLELIRRLAED
Sbjct: 442 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFECFQMSWKTANKKQGEKLLELIRRLAED 501
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVL LFW+LAHSD+V T+IM+QAL +H+KILDYSCSQERD QKTIWL C+E
Sbjct: 502 DKDGVMAHKVLTLFWNLAHSDEVPTEIMDQALNAHVKILDYSCSQERDAQKTIWLDKCVE 561
Query: 572 EFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
E K++ KW +PAL+QI++ICCLYEP N+ H R+H + RQ +I+ L HS ++
Sbjct: 562 ELKNSDKWALPALKQIREICCLYEPNPNIACHG---QRNH--HYRQDVIERLQAEHSAVI 616
Query: 632 LITNNLCSLL---------------QISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWL 676
L+TN+L + + I +G+ N + +V + + + + + WL
Sbjct: 617 LVTNSLTNYMDKMRQLVKENPDIDANIYMHDGRYNHIMQVQERLNFLRFL--LKDGQLWL 674
Query: 677 TPDRQ------LTESGL------KCFEKF------------------------------- 693
D+ L E G+ CF+ F
Sbjct: 675 CADQAEQIWQCLAEQGVFVSDREACFKWFSKLMGDEPDLDPAINKDFFQNNILQLDPTLL 734
Query: 694 -----------FKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRAI 742
FK+VN EG LK+K+R+ L+D+ DLIG +YLWRV+TN+ E+IA RAI
Sbjct: 735 TESGIKCYERFFKAVNSKEGX--LKLKRRTFLMDDVDLIGTDYLWRVVTNSPEEIANRAI 792
Query: 743 DLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIG-LSHTY 788
+LLKEV+T+LGP+LQSS+ FH T+I EC+DRL+AHYDT+ LS Y
Sbjct: 793 ELLKEVNTNLGPRLQSSVLAFHVTYIGECMDRLKAHYDTVSVLSKVY 839
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A QIW LA++ +F DREACFKWFSKLM DEPDLDP + KDFF+ ++L +P
Sbjct: 678 QAEQIWQCLAEQGVFVSDREACFKWFSKLMGDEPDLDPAINKDFFQNNILQLDP 731
>gi|242005600|ref|XP_002423652.1| ubiquitin specific protease 9/faf, putative [Pediculus humanus
corporis]
gi|212506812|gb|EEB10914.1| ubiquitin specific protease 9/faf, putative [Pediculus humanus
corporis]
Length = 2583
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/822 (53%), Positives = 544/822 (66%), Gaps = 128/822 (15%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP +KLA LD+KISS RWVVPVLP+QELECL++A+I+LCK D SE CQRFFREGL+I
Sbjct: 41 FPHDKLAELDTKISSPRWVVPVLPDQELECLLQASIDLCKKGIDTRSEACQRFFREGLTI 100
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTDDAV+SWK NI IY NCQ+L+EL V+KL QD FPLLD+L M+FNP KFH
Sbjct: 101 SFTKILTDDAVNSWKPNIQLYIYQNCQRLVELCVIKLNQDWFPLLDLLAMLFNPNCKFHV 160
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
FN+++ S+P +I+D+E++ RP+ + RGWLVDLIN FG++GGF+ILLERFQ
Sbjct: 161 FNNSRPPESIPPGMHISDEEVYCRPVPDSRLPRGWLVDLINKFGNLGGFKILLERFQTGE 220
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L++ V+++LIRPFG +E LT+ TI+KYFMP++E
Sbjct: 221 NLSVAVMYSLIRPFGLCYELLTVNTIVKYFMPVIE------------------------- 255
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
I+ ++L+ LTDEELKKEAKNE KND+IS IIK+ K L
Sbjct: 256 -----------------------IILQVLDGLTDEELKKEAKNELKNDSISCIIKAAKCL 292
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
+RVP +E+T K LEIFRL++ILRLLQISSFNGKMNALNEVNKVIA VAYYPHRH E
Sbjct: 293 VSRVPGKEETSKDLEIFRLRMILRLLQISSFNGKMNALNEVNKVIASVAYYPHRHTPVEE 352
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
+EWLTP+RMAKWIKDN VLEIVLRDSLHQPQYVEKLEKILRF+IKE+ L+L DLDA+WAA
Sbjct: 353 DEWLTPERMAKWIKDNQVLEIVLRDSLHQPQYVEKLEKILRFIIKERCLTLSDLDAIWAA 412
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CFQ+SWT+AN+KQ EKLLELIR LAED
Sbjct: 413 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFECFQSSWTNANKKQREKLLELIRHLAED 472
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVL LFW+LAHSDDV T+IM+QALA+H+KILDYSCSQ++D QKT WL C+E
Sbjct: 473 DKDGVMAHKVLTLFWNLAHSDDVPTEIMDQALAAHVKILDYSCSQKKDAQKTSWLAKCVE 532
Query: 572 EFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
E KS KWV+PAL+QI++ICCLYE NLN S RS RQ IID L NHSL++
Sbjct: 533 ELKSGDKWVLPALKQIREICCLYEQSPNLNH----SQRSQHIYYRQQIIDRLQNNHSLVI 588
Query: 632 LITNNLCSLLQ-ISSFNGKMNALNEVNKVIAGVAYYPHRHPEEE--------------WL 676
L++++L + ++ + L+ N I G Y H +E WL
Sbjct: 589 LVSDSLENYIEKVKKLVSHHPELDSQNFCIDG--RYCHELQVQERLNFLRFLLKDGRLWL 646
Query: 677 TPDRQ------LTESGL------KCFEKFFKSVNIGEGKLVLKVKKRSLLLDN------- 717
+ L E G+ CF+ F K +GE + K R DN
Sbjct: 647 CDSQAKQIWKCLAEDGVFPSDREACFKWFSKL--MGEEPDLDPTKNREFFEDNILQLDPT 704
Query: 718 ----ADLIGAEYLWRVITNA-------------------GEDIAFRAI------------ 742
+ + E ++ + G D +R I
Sbjct: 705 LLTESGMKCFERFFKTVNKKEGKLIQKHRSIVMEDPDLIGMDYLWRVITNSGEEIANRAI 764
Query: 743 DLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGL 784
++++EV T+LG +L S++ +FH+T+IAECLDRLR HYD + L
Sbjct: 765 EIMREVCTNLGSQLTSNIYEFHETYIAECLDRLRTHYDNVTL 806
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 42/54 (77%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A+QIW LA++ +F DREACFKWFSKLM +EPDLDP ++FFE ++L +P
Sbjct: 650 QAKQIWKCLAEDGVFPSDREACFKWFSKLMGEEPDLDPTKNREFFEDNILQLDP 703
>gi|307186143|gb|EFN71868.1| Probable ubiquitin carboxyl-terminal hydrolase FAF-X [Camponotus
floridanus]
Length = 2606
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/610 (65%), Positives = 468/610 (76%), Gaps = 55/610 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP+ KL +L KISS RWVVPVLPEQELECL++A+IELCK DV SE CQRFFREGL+I
Sbjct: 70 FPISKLNMLHEKISSPRWVVPVLPEQELECLLQASIELCKKGIDVQSEACQRFFREGLTI 129
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTDDAV+SWK NIHNCI NC +L+EL VLKL +D FPLLD+L MVFNP NKFHT
Sbjct: 130 SFTKILTDDAVNSWKLNIHNCINANCARLVELCVLKLDEDWFPLLDLLAMVFNPSNKFHT 189
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
FN+ + S +VP S+I D+E++ARP ++ RGWLVDLIN FGS+ GF+ILL RFQ+
Sbjct: 190 FNAVRASETVPPGSDIPDEELYARPPPDSRSPRGWLVDLINRFGSLNGFEILLSRFQSGR 249
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
LT+PVI+ALIRPFG +E LT+ TI+KY MPI+E
Sbjct: 250 NLTVPVIYALIRPFGLCYELLTVHTIVKYLMPIVE------------------------- 284
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP IL NLTD+ELKKEAKNESKNDAIS IIK+ K L
Sbjct: 285 -----------------------MVPLILNNLTDDELKKEAKNESKNDAISAIIKAAKCL 321
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
+RVPHQE+ +K LEI RLK+ILRLLQISSFNGKMNALNEVNKVI+ V+Y+ HR+ E
Sbjct: 322 VSRVPHQEEMIKNLEILRLKMILRLLQISSFNGKMNALNEVNKVISSVSYHQHRNTIVEE 381
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMAKWIKDN VLEIVLRDSLHQPQYVEKLEKILRF+IKE+AL+L DLDAVWAA
Sbjct: 382 EEWLTAERMAKWIKDNGVLEIVLRDSLHQPQYVEKLEKILRFIIKERALTLEDLDAVWAA 441
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CFQ SW +AN+KQ EKLLELIRRLAED
Sbjct: 442 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFECFQTSWRTANKKQREKLLELIRRLAED 501
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVL LFW+LAHSD+V T+IM+QAL +H+KILDYSCSQERD QKTIWL C+E
Sbjct: 502 DKDGVMAHKVLTLFWTLAHSDEVPTEIMDQALNAHVKILDYSCSQERDAQKTIWLDKCVE 561
Query: 572 EFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
E K+ KW +PAL+QI++ICCLYEP NL S RSH + RQ +I+ L HS+++
Sbjct: 562 ELKNGDKWALPALKQIREICCLYEPNPNLGH----SQRSHHLHYRQEVIERLQSEHSVVI 617
Query: 632 LITNNLCSLL 641
L+TN+L + +
Sbjct: 618 LVTNSLTNYM 627
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 99/131 (75%), Gaps = 4/131 (3%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KC+E+FFK+VN EGKL K+K+R+ L+D+ DLIG +YLWRV+TN+ E+IA R
Sbjct: 735 LTESGIKCYERFFKAVNSKEGKL--KLKRRTFLMDDVDLIGTDYLWRVVTNSPEEIANRG 792
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIG-LSHTYRPILPE-ARQIW 799
I+LLKEV+T+LGP+L SS+ FH+T+IAEC+DRL+AHYDT+ LS Y E Q+
Sbjct: 793 IELLKEVNTNLGPRLHSSVLAFHETYIAECMDRLKAHYDTVTVLSRVYLEGKDEREEQMT 852
Query: 800 TALAQEAIFHC 810
+ EAI C
Sbjct: 853 NKIKMEAIKMC 863
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A QIW LA++ +F DREACFKWFSKLM DEPDLDP + KDFF+ ++L +P
Sbjct: 679 QAEQIWQCLAEQGVFVSDREACFKWFSKLMGDEPDLDPAINKDFFQNNILQLDP 732
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 89/170 (52%), Gaps = 20/170 (11%)
Query: 623 LIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPD 679
+IKN ++ L + LLQISSFNGKMNALNEVNKVI+ V+Y+ HR+ EEEWLT +
Sbjct: 331 MIKNLEILRL--KMILRLLQISSFNGKMNALNEVNKVISSVSYHQHRNTIVEEEEWLTAE 388
Query: 680 RQ---LTESGLKCFEKFFKS-------VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWR- 728
R + ++G+ E + V E L +K+R+L L++ D + A +
Sbjct: 389 RMAKWIKDNGV--LEIVLRDSLHQPQYVEKLEKILRFIIKERALTLEDLDAVWAAQAGKH 446
Query: 729 --VITNAGEDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
++ N + +A A D E HL Q+S +K + L+ +R
Sbjct: 447 EAIVKNVHDLLAKLAWDFSPEQLDHLFECFQTSWRTANKKQREKLLELIR 496
>gi|345479954|ref|XP_001604458.2| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 1 [Nasonia vitripennis]
Length = 2606
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/638 (63%), Positives = 478/638 (74%), Gaps = 61/638 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KLA+LD KISS RWVVPVLPEQELECL++A+IELCK DV SE CQRFFREGL+I
Sbjct: 71 FPHAKLALLDEKISSPRWVVPVLPEQELECLLQASIELCKKGIDVQSEACQRFFREGLTI 130
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTDDAV+SWK NIHN I NCQ+L+EL VLKL +D FPLLD+L MVFNP NKFHT
Sbjct: 131 SFTKILTDDAVNSWKLNIHNYINANCQRLVELCVLKLDEDWFPLLDLLAMVFNPNNKFHT 190
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
FN+++ S +VP SNI DEI+A+ +N RGWLVDLIN FGS+GGF ILL+RF +
Sbjct: 191 FNASRASETVPPGSNIPYDEIYAQSPQDTRNPRGWLVDLINKFGSLGGFDILLKRFSSGR 250
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
LT+PVI+ALI+PFG E LT+ T+ KY MPI++
Sbjct: 251 NLTVPVIYALIKPFGLCCELLTVHTVHKYLMPIVK------------------------- 285
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP+IL+NLTD ELKKEAKNESKNDAIS IIK+ K +
Sbjct: 286 -----------------------MVPQILDNLTDAELKKEAKNESKNDAISAIIKAAKCM 322
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+RVP+QE+ +K LEI RLK+ILRLLQISSFNGKMNALNEVNKVIA V YY HR+P E
Sbjct: 323 ASRVPYQEEMIKNLEILRLKMILRLLQISSFNGKMNALNEVNKVIASVNYYLHRNPSLEE 382
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMAKWIK+N VLEIVLRDSLHQPQYVEKLEKILRF+IKE+ALSL DLDAVWAA
Sbjct: 383 EEWLTAERMAKWIKENGVLEIVLRDSLHQPQYVEKLEKILRFIIKERALSLEDLDAVWAA 442
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ SW +ANRKQ EKLLELIRRLAED
Sbjct: 443 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFECFKTSWKTANRKQREKLLELIRRLAED 502
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVL LFW+LAHSD+V T+IM+QAL +H+KILDYSCSQERD QKTIWL C+E
Sbjct: 503 DKDGVMAHKVLMLFWNLAHSDEVPTEIMDQALNAHVKILDYSCSQERDAQKTIWLDKCVE 562
Query: 572 EFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
E KS KW +PAL+QI++ICCLYEP N+ H P RSH + RQ +I+ L HS+++
Sbjct: 563 ELKSGDKWALPALKQIREICCLYEPNPNI-GHNP---RSHHAYYRQEVIERLQNQHSVVI 618
Query: 632 LITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHR 669
L+T +L + ++ K+ L + N I Y P R
Sbjct: 619 LVTKSLTTYME------KVRQLVKENSDIDPNTYSPDR 650
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 88/103 (85%), Gaps = 2/103 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN EGKL K K+R++L+D+ DLIG +YLWRV+TN E+IA R
Sbjct: 736 LTESGIKCFERFFKAVNSKEGKL--KQKRRTVLMDDVDLIGTDYLWRVVTNGSEEIANRG 793
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGL 784
I+LLKEV+T+LGP+LQSS+ FH+T+IAEC+DRL+A+YD + +
Sbjct: 794 IELLKEVNTNLGPRLQSSVMAFHETYIAECMDRLKAYYDAVSI 836
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A+QIW LA++A+F DREACFKWFSKLM DEPDLDP + KDFF ++L +P
Sbjct: 680 QAKQIWQCLAEQAVFVSDREACFKWFSKLMGDEPDLDPAINKDFFVYNILLLDP 733
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 81/157 (51%), Gaps = 22/157 (14%)
Query: 623 LIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPD 679
+IKN ++ L + LLQISSFNGKMNALNEVNKVIA V YY HR+P EEEWLT +
Sbjct: 332 MIKNLEILRL--KMILRLLQISSFNGKMNALNEVNKVIASVNYYLHRNPSLEEEEWLTAE 389
Query: 680 RQ---LTESGLKCFEKFFKS-------VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV 729
R + E+G+ E + V E L +K+R+L L++ D + W
Sbjct: 390 RMAKWIKENGV--LEIVLRDSLHQPQYVEKLEKILRFIIKERALSLEDLDAV-----WAA 442
Query: 730 ITNAGEDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKT 766
E I DLL +++ P+ L + KT
Sbjct: 443 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFECFKT 479
>gi|345479950|ref|XP_003424062.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 2 [Nasonia vitripennis]
gi|345479952|ref|XP_003424063.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 3 [Nasonia vitripennis]
Length = 2568
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/638 (63%), Positives = 478/638 (74%), Gaps = 61/638 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KLA+LD KISS RWVVPVLPEQELECL++A+IELCK DV SE CQRFFREGL+I
Sbjct: 71 FPHAKLALLDEKISSPRWVVPVLPEQELECLLQASIELCKKGIDVQSEACQRFFREGLTI 130
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTDDAV+SWK NIHN I NCQ+L+EL VLKL +D FPLLD+L MVFNP NKFHT
Sbjct: 131 SFTKILTDDAVNSWKLNIHNYINANCQRLVELCVLKLDEDWFPLLDLLAMVFNPNNKFHT 190
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
FN+++ S +VP SNI DEI+A+ +N RGWLVDLIN FGS+GGF ILL+RF +
Sbjct: 191 FNASRASETVPPGSNIPYDEIYAQSPQDTRNPRGWLVDLINKFGSLGGFDILLKRFSSGR 250
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
LT+PVI+ALI+PFG E LT+ T+ KY MPI++
Sbjct: 251 NLTVPVIYALIKPFGLCCELLTVHTVHKYLMPIVK------------------------- 285
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP+IL+NLTD ELKKEAKNESKNDAIS IIK+ K +
Sbjct: 286 -----------------------MVPQILDNLTDAELKKEAKNESKNDAISAIIKAAKCM 322
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+RVP+QE+ +K LEI RLK+ILRLLQISSFNGKMNALNEVNKVIA V YY HR+P E
Sbjct: 323 ASRVPYQEEMIKNLEILRLKMILRLLQISSFNGKMNALNEVNKVIASVNYYLHRNPSLEE 382
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMAKWIK+N VLEIVLRDSLHQPQYVEKLEKILRF+IKE+ALSL DLDAVWAA
Sbjct: 383 EEWLTAERMAKWIKENGVLEIVLRDSLHQPQYVEKLEKILRFIIKERALSLEDLDAVWAA 442
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ SW +ANRKQ EKLLELIRRLAED
Sbjct: 443 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFECFKTSWKTANRKQREKLLELIRRLAED 502
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVL LFW+LAHSD+V T+IM+QAL +H+KILDYSCSQERD QKTIWL C+E
Sbjct: 503 DKDGVMAHKVLMLFWNLAHSDEVPTEIMDQALNAHVKILDYSCSQERDAQKTIWLDKCVE 562
Query: 572 EFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
E KS KW +PAL+QI++ICCLYEP N+ H P RSH + RQ +I+ L HS+++
Sbjct: 563 ELKSGDKWALPALKQIREICCLYEPNPNI-GHNP---RSHHAYYRQEVIERLQNQHSVVI 618
Query: 632 LITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHR 669
L+T +L + ++ K+ L + N I Y P R
Sbjct: 619 LVTKSLTTYME------KVRQLVKENSDIDPNTYSPDR 650
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 88/103 (85%), Gaps = 2/103 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN EGKL K K+R++L+D+ DLIG +YLWRV+TN E+IA R
Sbjct: 736 LTESGIKCFERFFKAVNSKEGKL--KQKRRTVLMDDVDLIGTDYLWRVVTNGSEEIANRG 793
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGL 784
I+LLKEV+T+LGP+LQSS+ FH+T+IAEC+DRL+A+YD + +
Sbjct: 794 IELLKEVNTNLGPRLQSSVMAFHETYIAECMDRLKAYYDAVSI 836
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A+QIW LA++A+F DREACFKWFSKLM DEPDLDP + KDFF ++L +P
Sbjct: 680 QAKQIWQCLAEQAVFVSDREACFKWFSKLMGDEPDLDPAINKDFFVYNILLLDP 733
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 81/157 (51%), Gaps = 22/157 (14%)
Query: 623 LIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPD 679
+IKN ++ L + LLQISSFNGKMNALNEVNKVIA V YY HR+P EEEWLT +
Sbjct: 332 MIKNLEILRL--KMILRLLQISSFNGKMNALNEVNKVIASVNYYLHRNPSLEEEEWLTAE 389
Query: 680 RQ---LTESGLKCFEKFFKS-------VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV 729
R + E+G+ E + V E L +K+R+L L++ D + W
Sbjct: 390 RMAKWIKENGV--LEIVLRDSLHQPQYVEKLEKILRFIIKERALSLEDLDAV-----WAA 442
Query: 730 ITNAGEDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKT 766
E I DLL +++ P+ L + KT
Sbjct: 443 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFECFKT 479
>gi|332030161|gb|EGI69955.1| Putative ubiquitin carboxyl-terminal hydrolase FAF-X [Acromyrmex
echinatior]
Length = 2590
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/611 (64%), Positives = 466/611 (76%), Gaps = 55/611 (9%)
Query: 34 KFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLS 93
+FP+ KL +L KISS RWVVPVLPEQELECL++A+IELCK DV SE CQRFFREGL+
Sbjct: 69 EFPIFKLNMLHEKISSPRWVVPVLPEQELECLLQASIELCKKGIDVQSEACQRFFREGLT 128
Query: 94 ISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFH 153
ISFTKILTDDAV+SWK NIHNCI NC +L+EL VLKL +D FPLLD+L MVFNP NKFH
Sbjct: 129 ISFTKILTDDAVNSWKLNIHNCINTNCARLVELCVLKLDEDWFPLLDLLAMVFNPSNKFH 188
Query: 154 TFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNK 213
T N+ + S +VP S+I D+E++ARP + RGWLVDLIN FGS+ GF+ILL RFQ+
Sbjct: 189 TVNAIRVSETVPPGSDIPDEELYARPPSDSRAPRGWLVDLINRFGSLNGFEILLSRFQSG 248
Query: 214 STLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKN 273
LT+PVI+ALIRPFG +E LT+ TI+KY MPI+E
Sbjct: 249 RNLTVPVIYALIRPFGLCYELLTVHTIVKYLMPIVE------------------------ 284
Query: 274 DAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKL 333
+VP IL NLTD+ELKKEAKNESKNDAIS IIK+ K
Sbjct: 285 ------------------------MVPLILNNLTDDELKKEAKNESKNDAISAIIKAAKC 320
Query: 334 LAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP--- 390
L +RVPHQE+ +K LEI RLK+ILRLLQISSFNGKMNALNEVNKVI+ V+Y+ HR+
Sbjct: 321 LVSRVPHQEEMIKNLEILRLKMILRLLQISSFNGKMNALNEVNKVISSVSYHQHRNTIAE 380
Query: 391 EEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWA 450
EEEWLT +RMAKWIKDN VLEIVLRDSLHQPQYVEKLEKILRF+IKE+AL+L DLDAVWA
Sbjct: 381 EEEWLTAERMAKWIKDNGVLEIVLRDSLHQPQYVEKLEKILRFIIKERALTLEDLDAVWA 440
Query: 451 AQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAE 510
AQAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CFQ SW +AN+KQ EKLLELIRRLAE
Sbjct: 441 AQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFECFQTSWRTANKKQREKLLELIRRLAE 500
Query: 511 DDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCI 570
DDKDGVMA KVL LFW+LAHSD+V T+IM+QAL +H+KILDYSCSQERD QK IW+ C+
Sbjct: 501 DDKDGVMAHKVLTLFWTLAHSDEVPTEIMDQALNAHVKILDYSCSQERDAQKAIWVDKCV 560
Query: 571 EEFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
EE K+ KW +PAL+QI++ICCLYEP NL S RSH + RQ +I+ L HS++
Sbjct: 561 EELKNGDKWALPALKQIREICCLYEPNPNLGH----SQRSHHMHYRQEVIERLQNEHSVV 616
Query: 631 MLITNNLCSLL 641
+L+TN+L + +
Sbjct: 617 ILVTNSLTNYM 627
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 69/108 (63%), Positives = 92/108 (85%), Gaps = 3/108 (2%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KC+E+FFK+VN EGKL K+K+R+ L+D+ DLIG +YLWRV+TN+ E+IA R
Sbjct: 735 LTESGIKCYERFFKAVNSKEGKL--KLKRRTFLMDDVDLIGTDYLWRVVTNSPEEIANRG 792
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIG-LSHTY 788
I+LLKEV+T+LGP+LQSS+ FH+T+IAEC+DRL+AHYDT+ LS Y
Sbjct: 793 IELLKEVNTNLGPRLQSSVLAFHETYIAECMDRLKAHYDTVTVLSRVY 840
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A QIW LA++ +F DREACFKWFSKLM DEPDLDP + KDFF+ ++L +P
Sbjct: 679 QAEQIWQCLAEQGVFVSDREACFKWFSKLMGDEPDLDPAINKDFFQNNILQLDP 732
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 22/146 (15%)
Query: 623 LIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPD 679
+IKN ++ L + LLQISSFNGKMNALNEVNKVI+ V+Y+ HR+ EEEWLT +
Sbjct: 331 MIKNLEILRL--KMILRLLQISSFNGKMNALNEVNKVISSVSYHQHRNTIAEEEEWLTAE 388
Query: 680 RQ---LTESGLKCFEKFFKS-------VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV 729
R + ++G+ E + V E L +K+R+L L++ D + W
Sbjct: 389 RMAKWIKDNGV--LEIVLRDSLHQPQYVEKLEKILRFIIKERALTLEDLDAV-----WAA 441
Query: 730 ITNAGEDIAFRAIDLLKEVSTHLGPK 755
E I DLL +++ P+
Sbjct: 442 QAGKHEAIVKNVHDLLAKLAWDFSPE 467
>gi|383863681|ref|XP_003707308.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
[Megachile rotundata]
Length = 2585
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/636 (62%), Positives = 474/636 (74%), Gaps = 62/636 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FPV KL +L KISS RWVVPVLP+QELECL++A+I+LCK DV SE CQRFFREGL+I
Sbjct: 70 FPVAKLNMLHEKISSPRWVVPVLPDQELECLLQASIDLCKKGIDVQSEACQRFFREGLTI 129
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTDDAV+SWK NIHNCI NC++L+EL VLKL +D FPLLD+L MVFNP NKFHT
Sbjct: 130 SFTKILTDDAVNSWKLNIHNCINANCERLVELCVLKLEEDWFPLLDLLAMVFNPSNKFHT 189
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
FN+ + S +VP S+I D+E++ARP ++ RGWLVDLIN FGS+ GF+ILL RFQ+
Sbjct: 190 FNAARVSETVPPGSDIPDEELYARPPADSRSPRGWLVDLINRFGSLNGFEILLSRFQSGR 249
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
LT+PVI+ALIRPFG +E LT+ TI+KY MPI+E+
Sbjct: 250 NLTVPVIYALIRPFGLCYELLTVHTIVKYLMPIVEM------------------------ 285
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
IS+I L NLTDE+LKKEAKNESKNDAIS IIK+ K L
Sbjct: 286 -ISII-----------------------LNNLTDEQLKKEAKNESKNDAISAIIKAAKCL 321
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
+RVPHQ++ +K L I RLK+ILRLLQISSFNGKMNALNEVNKVI V++Y HR+ E
Sbjct: 322 VSRVPHQDEMIKNLGILRLKMILRLLQISSFNGKMNALNEVNKVITTVSFYQHRNAIVEE 381
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT + MAKWIK+N VLEIVLRDSLHQPQYVEKLEKILRF+IKE+AL+L DLDAVWAA
Sbjct: 382 EEWLTAECMAKWIKENGVLEIVLRDSLHQPQYVEKLEKILRFIIKERALTLDDLDAVWAA 441
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF FQ SW +AN+KQ EKLLELIRRLAED
Sbjct: 442 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFERFQMSWKTANKKQREKLLELIRRLAED 501
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVL LFW+LAHSD+V T+IM+QAL +H+KILDYSCSQERD QKTIWL C+E
Sbjct: 502 DKDGVMAHKVLTLFWNLAHSDEVPTEIMDQALKAHVKILDYSCSQERDAQKTIWLDKCVE 561
Query: 572 EFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
E K+ KW +PAL+ I+DICCLYE +++ H + R+H + RQ +I+ L HS ++
Sbjct: 562 ELKNGDKWALPALKLIRDICCLYELNPHISCH---NQRNH--HYRQDVIERLQAQHSAVI 616
Query: 632 LITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYP 667
L+TN+L +++ KM L + N I Y P
Sbjct: 617 LVTNSL------TNYMNKMRQLVKENPDIDVNTYMP 646
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/103 (62%), Positives = 86/103 (83%), Gaps = 2/103 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KC+E+FFK+VN + LK+KK + L+D+ DLIG EYLWRV+TN+ E+IA RA
Sbjct: 734 LTESGIKCYERFFKAVN--SKEGKLKLKKGTFLMDDVDLIGTEYLWRVVTNSPEEIANRA 791
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGL 784
I+LLKEV+T+LGP+LQSS+ FH T+I EC+DRL+AHYDT+ +
Sbjct: 792 IELLKEVNTNLGPRLQSSVLAFHVTYIGECMDRLKAHYDTVSV 834
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A QIW LA++ +F DREACFKWFSKLM DEPDLDP + KDFF+ ++L +P
Sbjct: 678 QAEQIWQCLAEQGVFVSDREACFKWFSKLMGDEPDLDPAINKDFFQNNILQLDP 731
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 89/172 (51%), Gaps = 20/172 (11%)
Query: 621 DILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLT 677
D +IKN ++ L + LLQISSFNGKMNALNEVNKVI V++Y HR+ EEEWLT
Sbjct: 329 DEMIKNLGILRL--KMILRLLQISSFNGKMNALNEVNKVITTVSFYQHRNAIVEEEEWLT 386
Query: 678 PD---RQLTESGLKCFEKFFKS-------VNIGEGKLVLKVKKRSLLLDNADLIGAEYLW 727
+ + + E+G+ E + V E L +K+R+L LD+ D + A
Sbjct: 387 AECMAKWIKENGV--LEIVLRDSLHQPQYVEKLEKILRFIIKERALTLDDLDAVWAAQAG 444
Query: 728 R---VITNAGEDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ ++ N + +A A D E HL + Q S +K + L+ +R
Sbjct: 445 KHEAIVKNVHDLLAKLAWDFSPEQLDHLFERFQMSWKTANKKQREKLLELIR 496
>gi|270006582|gb|EFA03030.1| hypothetical protein TcasGA2_TC010455 [Tribolium castaneum]
Length = 2437
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/610 (61%), Positives = 460/610 (75%), Gaps = 55/610 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP +KLA LD KIS+ RWVVPVLP+QELECL+K +I+L + N D SE CQRFFREGL+
Sbjct: 41 FPHDKLASLDEKISNIRWVVPVLPDQELECLLKVSIDLARKNLDTRSEACQRFFREGLTT 100
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTDDAV SWK NIH CI+NNC KL+EL V KL D FPLLD+L MV NP NKFHT
Sbjct: 101 SFTKILTDDAVSSWKANIHACIHNNCLKLIELCVAKLSHDWFPLLDLLAMVLNPNNKFHT 160
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
FNS++QS + S ++++E+FARP + +N RGWLVDLIN FG +GGFQ+LL+RFQ+
Sbjct: 161 FNSSRQSETAGPGSTLSEEELFARPSNDLRNPRGWLVDLINRFGELGGFQLLLDRFQSGK 220
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L++ V+FAL+RPFG +E+LT TI K+ +PILE
Sbjct: 221 NLSVSVVFALLRPFGLCYEFLTPHTINKFILPILE------------------------- 255
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP ILE LTD+ELK+EAKNESK+D +S IIKS K L
Sbjct: 256 -----------------------MVPGILEKLTDDELKREAKNESKSDIVSAIIKSSKNL 292
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRH---PE 391
A+RVP+QE+ ++ LE FRL +ILR LQISSFNGKMNALNE+NKVI+ V+YYP+RH E
Sbjct: 293 ASRVPNQEELIRTLEGFRLTMILRQLQISSFNGKMNALNEINKVISSVSYYPNRHHGIEE 352
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EE+LTP+RMAKWI +N VLEIVLRDSLHQPQYVEKLEKILRF+IKE+ALSL DLDAVWAA
Sbjct: 353 EEYLTPERMAKWINENRVLEIVLRDSLHQPQYVEKLEKILRFVIKERALSLKDLDAVWAA 412
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFS QLDHLF CFQ SWTSA+++Q E+LLELIRRLAED
Sbjct: 413 QAGKHEAIVKNVHDLLAKLAWDFSADQLDHLFECFQNSWTSASKRQRERLLELIRRLAED 472
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVL LFW+LAH++DV T+IM+QAL++H+KILDYSCSQERD QKT+WL C+E
Sbjct: 473 DKDGVMAHKVLTLFWNLAHAEDVTTEIMDQALSAHVKILDYSCSQERDAQKTVWLDKCVE 532
Query: 572 EFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
E K+ WV+PAL+QI++IC LYE N++ R+H RQ +I+ L HSL++
Sbjct: 533 ELKNGEIWVLPALKQIREICLLYEQ----NTNGGHGQRTHHMYYRQEVIERLQSQHSLVI 588
Query: 632 LITNNLCSLL 641
L+TN+L S +
Sbjct: 589 LVTNSLTSYM 598
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 82/101 (81%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN KL K+K+RSLL ++ DLIG +YLW+V+T +DIA RA
Sbjct: 706 LTESGIKCFERFFKAVNTKAEKL--KLKRRSLLTEDPDLIGLDYLWKVVTLCPDDIAERA 763
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
I+LL+EVST+LGP+LQ S +FH+ FI EC DRLRAHYDT+
Sbjct: 764 IELLREVSTNLGPRLQQSQMEFHENFITECHDRLRAHYDTV 804
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPI 848
+A+QIW LA+ A+F DREACFKWFSKLM +EPDLDP + KDFFE ++L +P+
Sbjct: 650 QAKQIWQCLAENAVFQSDREACFKWFSKLMGEEPDLDPGINKDFFENNILTLDPL 704
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 14/150 (9%)
Query: 641 LQISSFNGKMNALNEVNKVIAGVAYYPHRH---PEEEWLTPDR--------QLTESGLKC 689
LQISSFNGKMNALNE+NKVI+ V+YYP+RH EEE+LTP+R ++ E L+
Sbjct: 318 LQISSFNGKMNALNEINKVISSVSYYPNRHHGIEEEEYLTPERMAKWINENRVLEIVLRD 377
Query: 690 FEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWR---VITNAGEDIAFRAIDLLK 746
+ V E L +K+R+L L + D + A + ++ N + +A A D
Sbjct: 378 SLHQPQYVEKLEKILRFVIKERALSLKDLDAVWAAQAGKHEAIVKNVHDLLAKLAWDFSA 437
Query: 747 EVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ HL Q+S T K L+ +R
Sbjct: 438 DQLDHLFECFQNSWTSASKRQRERLLELIR 467
>gi|91094873|ref|XP_972735.1| PREDICTED: similar to ubiquitin specific peptidase 9 [Tribolium
castaneum]
Length = 2440
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/610 (61%), Positives = 460/610 (75%), Gaps = 55/610 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP +KLA LD KIS+ RWVVPVLP+QELECL+K +I+L + N D SE CQRFFREGL+
Sbjct: 41 FPHDKLASLDEKISNIRWVVPVLPDQELECLLKVSIDLARKNLDTRSEACQRFFREGLTT 100
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTDDAV SWK NIH CI+NNC KL+EL V KL D FPLLD+L MV NP NKFHT
Sbjct: 101 SFTKILTDDAVSSWKANIHACIHNNCLKLIELCVAKLSHDWFPLLDLLAMVLNPNNKFHT 160
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
FNS++QS + S ++++E+FARP + +N RGWLVDLIN FG +GGFQ+LL+RFQ+
Sbjct: 161 FNSSRQSETAGPGSTLSEEELFARPSNDLRNPRGWLVDLINRFGELGGFQLLLDRFQSGK 220
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L++ V+FAL+RPFG +E+LT TI K+ +PILE
Sbjct: 221 NLSVSVVFALLRPFGLCYEFLTPHTINKFILPILE------------------------- 255
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP ILE LTD+ELK+EAKNESK+D +S IIKS K L
Sbjct: 256 -----------------------MVPGILEKLTDDELKREAKNESKSDIVSAIIKSSKNL 292
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRH---PE 391
A+RVP+QE+ ++ LE FRL +ILR LQISSFNGKMNALNE+NKVI+ V+YYP+RH E
Sbjct: 293 ASRVPNQEELIRTLEGFRLTMILRQLQISSFNGKMNALNEINKVISSVSYYPNRHHGIEE 352
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EE+LTP+RMAKWI +N VLEIVLRDSLHQPQYVEKLEKILRF+IKE+ALSL DLDAVWAA
Sbjct: 353 EEYLTPERMAKWINENRVLEIVLRDSLHQPQYVEKLEKILRFVIKERALSLKDLDAVWAA 412
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFS QLDHLF CFQ SWTSA+++Q E+LLELIRRLAED
Sbjct: 413 QAGKHEAIVKNVHDLLAKLAWDFSADQLDHLFECFQNSWTSASKRQRERLLELIRRLAED 472
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVL LFW+LAH++DV T+IM+QAL++H+KILDYSCSQERD QKT+WL C+E
Sbjct: 473 DKDGVMAHKVLTLFWNLAHAEDVTTEIMDQALSAHVKILDYSCSQERDAQKTVWLDKCVE 532
Query: 572 EFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
E K+ WV+PAL+QI++IC LYE N++ R+H RQ +I+ L HSL++
Sbjct: 533 ELKNGEIWVLPALKQIREICLLYEQ----NTNGGHGQRTHHMYYRQEVIERLQSQHSLVI 588
Query: 632 LITNNLCSLL 641
L+TN+L S +
Sbjct: 589 LVTNSLTSYM 598
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 82/101 (81%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN KL K+K+RSLL ++ DLIG +YLW+V+T +DIA RA
Sbjct: 706 LTESGIKCFERFFKAVNTKAEKL--KLKRRSLLTEDPDLIGLDYLWKVVTLCPDDIAERA 763
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
I+LL+EVST+LGP+LQ S +FH+ FI EC DRLRAHYDT+
Sbjct: 764 IELLREVSTNLGPRLQQSQMEFHENFITECHDRLRAHYDTV 804
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPI 848
+A+QIW LA+ A+F DREACFKWFSKLM +EPDLDP + KDFFE ++L +P+
Sbjct: 650 QAKQIWQCLAENAVFQSDREACFKWFSKLMGEEPDLDPGINKDFFENNILTLDPL 704
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 14/150 (9%)
Query: 641 LQISSFNGKMNALNEVNKVIAGVAYYPHRH---PEEEWLTPDR--------QLTESGLKC 689
LQISSFNGKMNALNE+NKVI+ V+YYP+RH EEE+LTP+R ++ E L+
Sbjct: 318 LQISSFNGKMNALNEINKVISSVSYYPNRHHGIEEEEYLTPERMAKWINENRVLEIVLRD 377
Query: 690 FEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWR---VITNAGEDIAFRAIDLLK 746
+ V E L +K+R+L L + D + A + ++ N + +A A D
Sbjct: 378 SLHQPQYVEKLEKILRFVIKERALSLKDLDAVWAAQAGKHEAIVKNVHDLLAKLAWDFSA 437
Query: 747 EVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ HL Q+S T K L+ +R
Sbjct: 438 DQLDHLFECFQNSWTSASKRQRERLLELIR 467
>gi|307205765|gb|EFN83995.1| Probable ubiquitin carboxyl-terminal hydrolase FAF-X [Harpegnathos
saltator]
Length = 2565
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/610 (61%), Positives = 445/610 (72%), Gaps = 81/610 (13%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FPV KL +L KISS RWVVPVLPEQELECL++A+I+LCK
Sbjct: 70 FPVSKLNMLHEKISSPRWVVPVLPEQELECLLQASIDLCKK------------------- 110
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
DDAV+SWK NIHNCI NC +L+EL VLKL +D FPLLD+L MVFNP NKFHT
Sbjct: 111 -------DDAVNSWKLNIHNCINANCGRLVELCVLKLDEDWFPLLDLLAMVFNPSNKFHT 163
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
FN+ + S +VP S+I D+E++ARP ++ RGWLVDLIN FGS+ GF+ILL RFQ+
Sbjct: 164 FNAVRVSETVPPGSDIPDEELYARPPQDSRSPRGWLVDLINRFGSLNGFEILLSRFQSGR 223
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
LT+PVI+ALIRPFG +E LT+ TI+KY MPI+E
Sbjct: 224 NLTVPVIYALIRPFGLCYELLTVHTIVKYLMPIVE------------------------- 258
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP IL NLTD+ELKKEAKNESKNDAIS IIK+ K L
Sbjct: 259 -----------------------MVPLILNNLTDDELKKEAKNESKNDAISAIIKAAKCL 295
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
+RVPHQE+ +K LEI RLK+ILRLLQISSFNGKMNALNEVNKVI+ V+Y+ HR+ E
Sbjct: 296 VSRVPHQEEMIKNLEILRLKMILRLLQISSFNGKMNALNEVNKVISSVSYHQHRNTIVEE 355
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMAKWIKDN VLEIVLRDSLHQPQYVEKLEKILRF+IKE+AL+L DLDAVWAA
Sbjct: 356 EEWLTAERMAKWIKDNGVLEIVLRDSLHQPQYVEKLEKILRFIIKERALTLEDLDAVWAA 415
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CFQ SW +AN+KQ EKLLELIRRLAED
Sbjct: 416 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFECFQTSWRTANKKQREKLLELIRRLAED 475
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVL LFW+LAHSD+V T+IM+QAL +H+KILDYSCSQERD QKTIWL C+E
Sbjct: 476 DKDGVMAHKVLTLFWTLAHSDEVPTEIMDQALNAHVKILDYSCSQERDAQKTIWLDKCVE 535
Query: 572 EFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
E K+ KW +PAL+QI++ICCLYEP N+ S R H + RQ +I+ L HS+++
Sbjct: 536 ELKNGDKWALPALKQIREICCLYEPNPNMGH----SQRGHHLHYRQEVIERLQSEHSVVI 591
Query: 632 LITNNLCSLL 641
L+TN+L + +
Sbjct: 592 LVTNSLTNYM 601
Score = 147 bits (371), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/101 (66%), Positives = 89/101 (88%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KC+E+FFK+VN EGKL K+K+R+ L+D+ DLIG +YLWRV+TN+ E+IA RA
Sbjct: 709 LTESGIKCYERFFKAVNSKEGKL--KLKRRTFLMDDMDLIGTDYLWRVVTNSPEEIANRA 766
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
I+LLKEV+T+LGP+LQSS+ FH+T IAEC+DRL+AHYDT+
Sbjct: 767 IELLKEVNTNLGPRLQSSVLAFHETHIAECMDRLKAHYDTV 807
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A QIW LA++ +F DRE CFKWFSKLM +E DLDP + K+FF+ ++L +P
Sbjct: 653 QADQIWQCLAEQGVFVSDREVCFKWFSKLMGEESDLDPAIYKNFFQNNILQLDP 706
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 89/170 (52%), Gaps = 20/170 (11%)
Query: 623 LIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPD 679
+IKN ++ L + LLQISSFNGKMNALNEVNKVI+ V+Y+ HR+ EEEWLT +
Sbjct: 305 MIKNLEILRL--KMILRLLQISSFNGKMNALNEVNKVISSVSYHQHRNTIVEEEEWLTAE 362
Query: 680 RQ---LTESGLKCFEKFFKS-------VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWR- 728
R + ++G+ E + V E L +K+R+L L++ D + A +
Sbjct: 363 RMAKWIKDNGV--LEIVLRDSLHQPQYVEKLEKILRFIIKERALTLEDLDAVWAAQAGKH 420
Query: 729 --VITNAGEDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
++ N + +A A D E HL Q+S +K + L+ +R
Sbjct: 421 EAIVKNVHDLLAKLAWDFSPEQLDHLFECFQTSWRTANKKQREKLLELIR 470
>gi|195060969|ref|XP_001995898.1| GH14199 [Drosophila grimshawi]
gi|193891690|gb|EDV90556.1| GH14199 [Drosophila grimshawi]
Length = 2889
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/856 (47%), Positives = 521/856 (60%), Gaps = 166/856 (19%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL + +D D EPC F+R GL+
Sbjct: 130 FPTTKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELAQAGADHDCEPCVEFYRNGLTT 189
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWKYNIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+T
Sbjct: 190 SFAKILTDEAVNSWKYNIHHCILVSCGKLLHLIAIHMQRDNPYLLDLLAIVFDPDNKFNT 249
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN +Q + P + + +++FA+ K RGWLVDLIN FG +GGF LLERF
Sbjct: 250 FNGARQPECFAAPECIWGVLDSNKMFAKSPAEPKPPRGWLVDLINRFGQLGGFDNLLERF 309
Query: 211 ----------QNKST----------------LTIPVIFALIRPFGQVHEYLTLPTILKYF 244
Q+ +T LT+ +I +L+RPFGQ +E LT TI KYF
Sbjct: 310 NSGLELLRRHQSSATNKVKVETENAGGQDNRLTLALIHSLLRPFGQCYELLTPATIAKYF 369
Query: 245 MPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILE 304
MP + V ++L+
Sbjct: 370 MPTWNV------------------------------------------------VLDLLD 381
Query: 305 NLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISS 364
+ TDEELK+E K E +ND I+ I+KS + LA+R+ QE+ ++ LE+FRLK+ILRLLQ+SS
Sbjct: 382 SFTDEELKREVKPEGRNDYINGIVKSARFLASRLSGQEELIRDLEMFRLKMILRLLQVSS 441
Query: 365 FNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVLEIVLR 415
FNGKMNALNE+NKV++ VAYY HR PE+E WLT +RMA+WIK ++VL IVL+
Sbjct: 442 FNGKMNALNEINKVLSSVAYYSHRSQPLPHNLPEDEMDWLTAERMAQWIKSSDVLGIVLK 501
Query: 416 DSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFS 475
DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKN+H+LLAKLAWDF+
Sbjct: 502 DSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNMHDLLAKLAWDFT 561
Query: 476 PVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVM 535
P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +V
Sbjct: 562 PEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQEVP 621
Query: 536 TDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYE 595
++++QAL +H+KILDYSCSQERD QKTIWL C+ E KS WV+PALR I+DICCLY+
Sbjct: 622 PEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVGELKSGDSWVLPALRLIRDICCLYD 681
Query: 596 PGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ-ISSFNGKMNALN 654
N HAP R+ + NR +I+ L ++SL++L+TN+L + ++ + S + L+
Sbjct: 682 MTPN---HAP---RTQTGTNRLQVIERLQNDYSLVILVTNSLTAYMEKVRSLVNETPTLD 735
Query: 655 EVNKVIAGVAYYPHRHPEEE--------------WLTPDRQ------------LTESGLK 688
+I G +PH E WL D+ T +
Sbjct: 736 AATILIDG--RFPHHAQIAERLEFLKFLLKDGQLWLCADQAKQIWHCLAVNAVFTADREE 793
Query: 689 CFEKFFK------------------------------------------SVNIGEGKLVL 706
CF F K +VN E K L
Sbjct: 794 CFRWFGKLMGEEPDLDPGINKDFFENNILQLDPHLLTESGIKCFERFFKAVNSKEDK--L 851
Query: 707 KVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKT 766
K R +LDN DLIG +YLWRVIT GE+IA +AIDLLKEVST LGP+LQ +T+FH+
Sbjct: 852 KAIHRGYILDNEDLIGKDYLWRVITTGGEEIANKAIDLLKEVSTALGPRLQEHITEFHEM 911
Query: 767 FIAECLDRLRAHYDTI 782
FI EC RLR HY I
Sbjct: 912 FIGECCSRLRTHYSNI 927
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 773 QAKQIWHCLAVNAVFTADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 830
Query: 854 LSGL 857
SG+
Sbjct: 831 ESGI 834
>gi|195390799|ref|XP_002054055.1| GJ24225 [Drosophila virilis]
gi|194152141|gb|EDW67575.1| GJ24225 [Drosophila virilis]
Length = 2836
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/862 (47%), Positives = 524/862 (60%), Gaps = 172/862 (19%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL + D D EPC F+R GL+
Sbjct: 112 FPTAKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELAQAGVDHDCEPCVEFYRNGLTT 171
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWKYNIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+T
Sbjct: 172 SFAKILTDEAVNSWKYNIHHCILLSCGKLLNLIAIHMQRDNPYLLDLLAIVFDPDNKFNT 231
Query: 155 FNSNQQSISVPVNSNI----ADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + +I ++++A+P KN RGWLVDLIN FG +GGF LLERF
Sbjct: 232 FNAVRQPECFAASDSIWGVLDSNKMYAKPPPEPKNPRGWLVDLINRFGQLGGFDNLLERF 291
Query: 211 --------QNKST------------------------LTIPVIFALIRPFGQVHEYLTLP 238
+N++T LT+ +I +L+RPFGQ +E LT
Sbjct: 292 NSGLELLKRNQNTKGGAVKSIASNESVGVEGAGHDNRLTLALIHSLLRPFGQCYELLTPA 351
Query: 239 TILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEI 298
TI KYFMP +
Sbjct: 352 TIAKYFMPTWNV------------------------------------------------ 363
Query: 299 VPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILR 358
V ++L++ TD+ELK+E K E +ND I+ I+KS + LA+R+ QE+ ++ LE+FRLK+ILR
Sbjct: 364 VLDLLDSFTDDELKREVKPEGRNDYINGIVKSARSLASRLTGQEEMIRDLEMFRLKMILR 423
Query: 359 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNV 409
LLQ+SSFNGKMNALNE+NKV++ VAYY HR PE+E WLT +RMA+WIK ++V
Sbjct: 424 LLQVSSFNGKMNALNEINKVLSSVAYYSHRSQPLPHCLPEDEMDWLTAERMAQWIKSSDV 483
Query: 410 LEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAK 469
L IVL+DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKN+H+LLAK
Sbjct: 484 LGIVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNMHDLLAK 543
Query: 470 LAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLA 529
LAWDF+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LA
Sbjct: 544 LAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLA 603
Query: 530 HSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKD 589
HS +V ++++QAL +H+KILDYSCSQERD QKTIWL C+ E KS WV+PALR I+D
Sbjct: 604 HSQEVPPEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVGELKSGDTWVLPALRLIRD 663
Query: 590 ICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLL-QISSFNG 648
ICCLY+ N HAP R+ + NR +I+ L ++SL++L+TN+L + + ++ +
Sbjct: 664 ICCLYDTTPN---HAP---RTQTGTNRLQVIERLQNDYSLVILVTNSLTAYMDKVRAMVN 717
Query: 649 KMNALNEVNKVIAGVAYYPHRHPEEE--------------WLTPDRQ------------L 682
+ +L+ +I G +PH E WL D+
Sbjct: 718 ETPSLDAATILIDG--RFPHHAQIAERLEFLKFLLKDGQLWLCADQAKQIWHCLAVNAVF 775
Query: 683 TESGLKCFEKFFK------------------------------------------SVNIG 700
T +CF F K +VN
Sbjct: 776 TADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLDPHLLTESGIKCFERFFKAVNSK 835
Query: 701 EGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRAIDLLKEVSTHLGPKLQSSL 760
E K LK R +LDN DLIG +YLWRVIT GE+IA +AIDLLKEVST LGP+LQ +
Sbjct: 836 EDK--LKAIHRGYILDNEDLIGKDYLWRVITTGGEEIANKAIDLLKEVSTALGPRLQEHI 893
Query: 761 TQFHKTFIAECLDRLRAHYDTI 782
T+FH+ FI EC RLR HY I
Sbjct: 894 TEFHEMFIGECCSRLRTHYSNI 915
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 761 QAKQIWHCLAVNAVFTADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 818
Query: 854 LSGL 857
SG+
Sbjct: 819 ESGI 822
>gi|327268409|ref|XP_003218990.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like [Anolis carolinensis]
Length = 2552
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/697 (55%), Positives = 477/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAIEL K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIELSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S +VP +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHLYNGTRPSETVPAGVQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELYARPPDP-RSPKGWLVDLINKFGTLNGFQILHDRFMSGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ K
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAK 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 EHGEYDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGSDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|387019563|gb|AFJ51899.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X [Crotalus
adamanteus]
Length = 2551
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/697 (55%), Positives = 478/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAIEL K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIELSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S +VP + +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHLYNGTRPSETVPAGAQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELYARPPDP-RSPKGWLVDLINKFGTLNGFQILHDRFMSGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGSPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + R+ R +I+ L NH+L+ L+ NL + ++ K
Sbjct: 577 CSLFGEAPQNLSQ----TQRAPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAK 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 EHGEYDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|326913480|ref|XP_003203066.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 1 [Meleagris gallopavo]
Length = 2552
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/697 (55%), Positives = 477/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S +VP +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHLYNGTRPSETVPAGVQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELYARPPDP-RSPKGWLVDLINKFGTLNGFQILHDRFMSGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ K
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAK 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 EHGEYDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGNDDIANRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|326913484|ref|XP_003203068.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 3 [Meleagris gallopavo]
Length = 2571
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/697 (55%), Positives = 477/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S +VP +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHLYNGTRPSETVPAGVQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELYARPPDP-RSPKGWLVDLINKFGTLNGFQILHDRFMSGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ K
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAK 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 EHGEYDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGNDDIANRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|118083913|ref|XP_416773.2| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 2 [Gallus gallus]
Length = 2552
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/697 (55%), Positives = 477/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S +VP +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHLYNGTRPSETVPAGVQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELYARPPDP-RSPKGWLVDLINKFGTLNGFQILHDRFMSGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ K
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAK 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 EHGEYDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGNDDIANRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|118083915|ref|XP_001233542.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 1 [Gallus gallus]
Length = 2555
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/697 (55%), Positives = 477/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S +VP +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHLYNGTRPSETVPAGVQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELYARPPDP-RSPKGWLVDLINKFGTLNGFQILHDRFMSGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ K
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAK 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 EHGEYDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGNDDIANRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|326913482|ref|XP_003203067.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 2 [Meleagris gallopavo]
Length = 2555
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/697 (55%), Positives = 477/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S +VP +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHLYNGTRPSETVPAGVQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELYARPPDP-RSPKGWLVDLINKFGTLNGFQILHDRFMSGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ K
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAK 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 EHGEYDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGNDDIANRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|449268686|gb|EMC79535.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X [Columba
livia]
Length = 2552
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/697 (55%), Positives = 477/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S +VP +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHLYNGTRPSETVPAGVQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQ+L +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELYARPPDP-RSPKGWLVDLINKFGTLNGFQVLHDRFMSGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ K
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAK 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 EHGEYDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGNDDIANRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|345323425|ref|XP_003430712.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
[Ornithorhynchus anatinus]
Length = 2553
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/697 (55%), Positives = 477/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S +VP +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPSETVPAGVQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELYARPPDP-RSPKGWLVDLINKFGTLNGFQILHDRFISGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ K
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAK 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 EHGEYDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|126325293|ref|XP_001366602.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 2 [Monodelphis domestica]
Length = 2566
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/697 (55%), Positives = 477/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S ++P +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPSETIPAGVQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELYARPPDP-RSPKGWLVDLINKFGTLNGFQILHDRFISGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ K
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAK 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 EHGEYDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGSDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|149633777|ref|XP_001513326.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 2 [Ornithorhynchus anatinus]
Length = 2572
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/697 (55%), Positives = 477/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S +VP +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPSETVPAGVQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELYARPPDP-RSPKGWLVDLINKFGTLNGFQILHDRFISGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ K
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAK 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 EHGEYDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|410896468|ref|XP_003961721.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like [Takifugu rubripes]
Length = 2556
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/655 (57%), Positives = 465/655 (70%), Gaps = 57/655 (8%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV E CQRFFR+GL+I
Sbjct: 67 FPHADLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQRFFRDGLTI 126
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTD+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 127 SFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMATNPHCKFHI 186
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + S SVP + +ADDE+FARP D ++ +GWLVDLIN FG++ GFQIL +RF +
Sbjct: 187 YNGTRPSESVPAGAQLADDELFARPPDP-RSPKGWLVDLINKFGTLNGFQILHDRFMSGQ 245
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+LTL T+ KYF+P++E
Sbjct: 246 ALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIE------------------------- 280
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 281 -----------------------MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 317
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRH--PEE 392
A+RVP QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EE
Sbjct: 318 ASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHNPEEE 377
Query: 393 EWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQ 452
EWLT +RMA+WI+ N++L IVLRDSLHQPQYVEKLEKILRF+IKEKAL++ DLD +WAAQ
Sbjct: 378 EWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTMQDLDNIWAAQ 437
Query: 453 AGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDD 512
AGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDD
Sbjct: 438 AGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDD 497
Query: 513 KDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEE 572
KDGVMA KVLNL W+LAHSDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE
Sbjct: 498 KDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEE 557
Query: 573 FKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L NH+L+
Sbjct: 558 LRTNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVT 613
Query: 632 LITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
L+ NL + ++ K A + V G + Y H +E L R L + G
Sbjct: 614 LVAENLSAYMETMRQLSKEQAEFDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 667
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 731 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGSDDIASRA 788
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGPKLQ + + H+ FI C DRL+A YDT+
Sbjct: 789 IDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDTL 829
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A+F CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 674 PQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 728
>gi|126325291|ref|XP_001366553.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 1 [Monodelphis domestica]
Length = 2553
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/697 (55%), Positives = 477/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S ++P +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPSETIPAGVQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELYARPPDP-RSPKGWLVDLINKFGTLNGFQILHDRFISGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ K
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAK 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 EHGEYDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGSDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|126325295|ref|XP_001366651.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 3 [Monodelphis domestica]
Length = 2554
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/697 (55%), Positives = 477/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S ++P +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPSETIPAGVQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELYARPPDP-RSPKGWLVDLINKFGTLNGFQILHDRFISGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ K
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAK 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 EHGEYDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGSDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|224042623|ref|XP_002192395.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
[Taeniopygia guttata]
Length = 2552
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/697 (55%), Positives = 479/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHR----KEGTSCGPGC----TCKFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S ++G + P FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQADAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S +VP +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHLYNGTRPSETVPAGVQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQ+L +RF + S L + +I ALI+PFGQ E
Sbjct: 206 ELYARPPDP-RSPKGWLVDLINKFGTLNGFQVLHDRFMSGSALNVQIIAALIKPFGQCFE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ K
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAK 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 EHGEYDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGNDDIANRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|116875773|ref|NP_001070917.1| probable ubiquitin carboxyl-terminal hydrolase FAF-X [Danio rerio]
gi|68705339|gb|AAY99448.1| ubiquitin specific protease 9 [Danio rerio]
Length = 2551
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/656 (57%), Positives = 465/656 (70%), Gaps = 58/656 (8%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP +LA LD I+ RWVVPVLP+ ELE L++AAI+LCK DV E CQRFFR+GL+I
Sbjct: 67 FPHTELAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGIDVKCEACQRFFRDGLTI 126
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTD+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 127 SFTKILTDEAVSGWKFEIHRCIINNAHRLVELCVTKLSQDWFPLLELLAMATNPHCKFHI 186
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + S +VP +A+DE+FARP D ++ +GWLVDLIN FG++ GFQ L +RF +
Sbjct: 187 YNGTRPSETVPAGVQLAEDELFARPPDP-RSPKGWLVDLINKFGTLNGFQTLHDRFMSGQ 245
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+LTL T+ KYF+PI+E
Sbjct: 246 ALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIE------------------------- 280
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 281 -----------------------MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 317
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+RVP QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH E
Sbjct: 318 ASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEE 377
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 378 EEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 437
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ SWT+A++KQ EKLLELIRRLAED
Sbjct: 438 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWTNASKKQREKLLELIRRLAED 497
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LAHSDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 498 DKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSCSQDRDTQKMQWIDRFIE 557
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L NH+L+
Sbjct: 558 ELRTNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALV 613
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
L+ NL + ++ K +A + V G + Y H +E L R L + G
Sbjct: 614 TLVAENLSAYMENMRQFSKEHADFDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 94/139 (67%), Gaps = 10/139 (7%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGSDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQ---- 797
IDLLKE+ T+LGPKLQ++ + H+ FI C DRL+A YDT+ + + + ARQ
Sbjct: 790 IDLLKEIYTNLGPKLQANQVEIHEDFIQSCFDRLKASYDTLCVLDGDKDSINCARQEAIR 849
Query: 798 ---IWTALAQEAIFHCDRE 813
+ T L +E I CD +
Sbjct: 850 MVRVLTVL-REYITECDSD 867
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A+F CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 729
>gi|348528270|ref|XP_003451641.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
[Oreochromis niloticus]
Length = 2559
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/611 (59%), Positives = 450/611 (73%), Gaps = 56/611 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV E CQRFFR+GL+I
Sbjct: 69 FPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQRFFRDGLTI 128
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTD+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 129 SFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMATNPHCKFHI 188
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + S +VP + +ADDE++ARP D ++ +GWLVDLIN FG++ GFQIL +RF +
Sbjct: 189 YNGTRPSETVPAGAQLADDELYARPPDP-RSPKGWLVDLINKFGTLNGFQILHDRFMSGQ 247
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+LTL T+ KYF+P++E
Sbjct: 248 ALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIE------------------------- 282
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 283 -----------------------MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 319
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRH--PEE 392
A+RVP QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EE
Sbjct: 320 ASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHNPEEE 379
Query: 393 EWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQ 452
EWLT +RMA+WI+ N++L IVLRDSLHQPQYVEKLEKILRF+IKEKAL++ DLD +WAAQ
Sbjct: 380 EWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTMQDLDNIWAAQ 439
Query: 453 AGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDD 512
AGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDD
Sbjct: 440 AGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDD 499
Query: 513 KDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEE 572
KDGVMA KVLNL W+LAHSDDV DIM+QAL++H+KILDYSCSQ+RD QK W+ IEE
Sbjct: 500 KDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSCSQDRDTQKIQWIDRFIEE 559
Query: 573 FKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L NH+L+
Sbjct: 560 LRTNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVT 615
Query: 632 LITNNLCSLLQ 642
L+ NL + ++
Sbjct: 616 LVAENLSAYME 626
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 734 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGSDDIANRA 791
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGPKLQ + + H+ FI C DRL+A YDT+
Sbjct: 792 IDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDTL 832
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A+F CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 677 PQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 731
>gi|209571464|ref|NP_001129365.1| probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform 1
[Rattus norvegicus]
gi|149044325|gb|EDL97646.1| ubiquitin specific peptidase 9, X chromosome (predicted) [Rattus
norvegicus]
Length = 2547
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/697 (55%), Positives = 474/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKSLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGSSEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ G+
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYMESMRLYGR 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
N + V G + Y H +E L R L + G
Sbjct: 633 DNEDYDPQTVRVG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
>gi|209571553|ref|NP_001129395.1| probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform 2
[Rattus norvegicus]
Length = 2554
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/697 (55%), Positives = 474/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKSLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGSSEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++ G+
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYMESMRLYGR 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
N + V G + Y H +E L R L + G
Sbjct: 633 DNEDYDPQTVRVG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
>gi|148703754|gb|EDL35701.1| ubiquitin specific peptidase 9, X chromosome [Mus musculus]
Length = 1374
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/697 (55%), Positives = 474/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH +EEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGSSEDEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ S RS R +I+ L NH+L+ L+ NL + ++ G+
Sbjct: 577 CSLFGEAPQNLSQ----SQRSPHVFYRHDLINQLQHNHALVTLVAENLATYMESMRMYGR 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
N + V G + Y H +E L R L + G
Sbjct: 633 DNEDYDPQTVRLG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 93/139 (66%), Gaps = 10/139 (7%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIACRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQ---- 797
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+ + + + ARQ
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSINCARQEAVR 849
Query: 798 ---IWTALAQEAIFHCDRE 813
+ T L +E I CD +
Sbjct: 850 MVRVLTVL-REYINECDSD 867
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
>gi|432931208|ref|XP_004081603.1| PREDICTED: LOW QUALITY PROTEIN: probable ubiquitin
carboxyl-terminal hydrolase FAF-X-like [Oryzias latipes]
Length = 2551
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/655 (57%), Positives = 463/655 (70%), Gaps = 57/655 (8%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV E CQRFFR+GL+I
Sbjct: 69 FPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQRFFRDGLTI 128
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTD+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 129 SFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMATNPHCKFHI 188
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + S +VP + + DDE++ARP D ++ +GWLVDLIN FG++ GFQIL +RF +
Sbjct: 189 YNGTRPSETVPAGAQLPDDELYARPPDP-RSPKGWLVDLINKFGNLNGFQILHDRFMSGQ 247
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+LTL T+ KYF+P++E
Sbjct: 248 ALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIE------------------------- 282
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 283 -----------------------MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 319
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRH--PEE 392
A+RVP QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EE
Sbjct: 320 ASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHNPEEE 379
Query: 393 EWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQ 452
EWLT +RMA+WI+ N++L IVLRDSLHQPQYVEKLEKILRF+IKEKAL++ DLD +WAAQ
Sbjct: 380 EWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTMQDLDNIWAAQ 439
Query: 453 AGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDD 512
AGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDD
Sbjct: 440 AGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDD 499
Query: 513 KDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEE 572
KDGVMA KVLNL W+LAHSDDV DIM+QAL +H+KILDYSCSQ+RD QK W+ IEE
Sbjct: 500 KDGVMAHKVLNLLWNLAHSDDVPVDIMDQALNAHIKILDYSCSQDRDTQKIQWIDRFIEE 559
Query: 573 FKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L NH+L+
Sbjct: 560 LRTNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVT 615
Query: 632 LITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
L+ NL + ++ K A + V G + Y H +E L R L + G
Sbjct: 616 LVAENLSAYMETMRQLSKEQAEFDPQTVRPG-SRYSHVQEVQERLNFLRFLLKDG 669
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 733 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGSDDIASRA 790
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGPKLQ + + H+ FI C DRL+A YDT+
Sbjct: 791 IDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDTL 831
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A+F CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 676 PQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 730
>gi|115511018|ref|NP_033507.2| probable ubiquitin carboxyl-terminal hydrolase FAF-X [Mus musculus]
gi|68705306|gb|AAY99447.1| ubiquitin specific protease 9 SSSRF- isoform [Mus musculus]
Length = 2554
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/697 (55%), Positives = 474/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH +EEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGSSEDEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ S RS R +I+ L NH+L+ L+ NL + ++ G+
Sbjct: 577 CSLFGEAPQNLSQ----SQRSPHVFYRHDLINQLQHNHALVTLVAENLATYMESMRMYGR 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
N + V G + Y H +E L R L + G
Sbjct: 633 DNEDYDPQTVRLG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIACRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
>gi|344240455|gb|EGV96558.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X [Cricetulus
griseus]
Length = 2558
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/654 (57%), Positives = 460/654 (70%), Gaps = 62/654 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV ++ + +D
Sbjct: 146 RCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSASAQVPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLEDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHA-PLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+S + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSSSRFSQTQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 630
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 737 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 794
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 795 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 835
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 680 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 734
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|338729100|ref|XP_001489487.2| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 2 [Equus caballus]
Length = 2570
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 459/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L+M NP KFH +N + SV N + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHIYNGTRPCESVSSNVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+P++E
Sbjct: 265 FLTLHTVKKYFLPVIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|342187109|sp|P70398.2|USP9X_MOUSE RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase FAF-X;
AltName: Full=Deubiquitinating enzyme FAF-X; AltName:
Full=Fat facets homolog; AltName: Full=Fat facets
protein-related, X-linked; AltName: Full=Ubiquitin
carboxyl-terminal hydrolase FAM; AltName: Full=Ubiquitin
thioesterase FAF-X; AltName: Full=Ubiquitin-specific
protease 9, X chromosome; AltName:
Full=Ubiquitin-specific-processing protease FAF-X
Length = 2559
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/697 (55%), Positives = 474/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH +EEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGSSEDEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ S RS R +I+ L NH+L+ L+ NL + ++ G+
Sbjct: 577 CSLFGEAPQNLSQ----SQRSPHVFYRHDLINQLQHNHALVTLVAENLATYMESMRMYGR 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
N + V G + Y H +E L R L + G
Sbjct: 633 DNEDYDPQTVRLG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIACRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
>gi|194227824|ref|XP_001489555.2| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 3 [Equus caballus]
Length = 2554
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 459/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L+M NP KFH +N + SV N + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHIYNGTRPCESVSSNVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+P++E
Sbjct: 265 FLTLHTVKKYFLPVIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|354465898|ref|XP_003495413.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 3 [Cricetulus griseus]
Length = 2546
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 459/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV ++ + +D
Sbjct: 146 RCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSASAQVPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLEDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|354465894|ref|XP_003495411.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 1 [Cricetulus griseus]
Length = 2553
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 459/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV ++ + +D
Sbjct: 146 RCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSASAQVPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLEDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|354465896|ref|XP_003495412.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 2 [Cricetulus griseus]
Length = 2569
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 459/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV ++ + +D
Sbjct: 146 RCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSASAQVPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLEDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|74197937|dbj|BAC33657.2| unnamed protein product [Mus musculus]
Length = 756
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/697 (55%), Positives = 473/697 (67%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRH---PEEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH +EEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGSSEDEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LL KL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLDKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ S RS R +I+ L NH+L+ L+ NL + ++ G+
Sbjct: 577 CSLFGEAPQNLSQ----SQRSPHVFYRHDLINQLQHNHALVTLVAENLATYMESMRMYGR 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
N + V G + Y H +E L R L + G
Sbjct: 633 DNEDYDPQTVRLG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/24 (75%), Positives = 22/24 (91%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLV 705
LTE+G+KCFE+FFK+VN EGKLV
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV 755
>gi|344292633|ref|XP_003418030.1| PREDICTED: LOW QUALITY PROTEIN: probable ubiquitin
carboxyl-terminal hydrolase FAF-X-like [Loxodonta
africana]
Length = 2554
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 461/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHR----KEGTSCGP----GCTCKFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S ++G GP FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDGPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV N + +D
Sbjct: 146 RCIVNNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSNVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N + L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGTALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+P++E
Sbjct: 265 FLTLHTVKKYFLPVIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|297493245|ref|XP_002700252.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 1 [Bos taurus]
gi|358420807|ref|XP_001787444.2| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 1 [Bos taurus]
gi|296470613|tpg|DAA12728.1| TPA: ubiquitin specific peptidase 9, X-linked isoform 1 [Bos
taurus]
gi|440911261|gb|ELR60956.1| Putative ubiquitin carboxyl-terminal hydrolase FAF-X [Bos grunniens
mutus]
Length = 2570
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/612 (59%), Positives = 448/612 (73%), Gaps = 57/612 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+I
Sbjct: 67 FPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTI 126
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTD+AV WK+ IH CI NN +L+EL V KL QD FPLL++L+M NP KFH
Sbjct: 127 SFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHI 186
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + SV N + +DE+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S
Sbjct: 187 YNGTRPCESVSSNVQLPEDELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGS 245
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+LTL T+ KYF+P++E
Sbjct: 246 ALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIE------------------------- 280
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 281 -----------------------MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 317
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+RVP QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH E
Sbjct: 318 ASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEE 377
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 378 EEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 437
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 438 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 497
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 498 DKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIE 557
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L NH+L+
Sbjct: 558 ELRTNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALV 613
Query: 631 MLITNNLCSLLQ 642
L+ NL + ++
Sbjct: 614 TLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|426256870|ref|XP_004022059.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 3 [Ovis aries]
Length = 2570
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/612 (59%), Positives = 448/612 (73%), Gaps = 57/612 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+I
Sbjct: 67 FPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTI 126
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTD+AV WK+ IH CI NN +L+EL V KL QD FPLL++L+M NP KFH
Sbjct: 127 SFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHI 186
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + SV N + +DE+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S
Sbjct: 187 YNGTRPCESVSSNVQLPEDELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGS 245
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+LTL T+ KYF+P++E
Sbjct: 246 ALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIE------------------------- 280
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 281 -----------------------MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 317
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+RVP QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH E
Sbjct: 318 ASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEE 377
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 378 EEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 437
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 438 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 497
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 498 DKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIE 557
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L NH+L+
Sbjct: 558 ELRTNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALV 613
Query: 631 MLITNNLCSLLQ 642
L+ NL + ++
Sbjct: 614 TLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|1527199|gb|AAB07731.1| FAM [Mus musculus]
Length = 2559
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/697 (55%), Positives = 473/697 (67%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP L LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLPKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH +EEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGSSEDEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ S RS R +I+ L NH+L+ L+ NL + ++ G+
Sbjct: 577 CSLFGEAPQNLSQ----SQRSPHVFYRHDLINQLQHNHALVTLVAENLATYMESMRMYGR 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
N + V G + Y H +E L R L + G
Sbjct: 633 DNEDYDPQTVRLG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIACRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
>gi|426256866|ref|XP_004022057.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 1 [Ovis aries]
Length = 2554
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/612 (59%), Positives = 448/612 (73%), Gaps = 57/612 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+I
Sbjct: 67 FPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTI 126
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTD+AV WK+ IH CI NN +L+EL V KL QD FPLL++L+M NP KFH
Sbjct: 127 SFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHI 186
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + SV N + +DE+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S
Sbjct: 187 YNGTRPCESVSSNVQLPEDELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGS 245
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+LTL T+ KYF+P++E
Sbjct: 246 ALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIE------------------------- 280
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 281 -----------------------MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 317
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+RVP QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH E
Sbjct: 318 ASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEE 377
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 378 EEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 437
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 438 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 497
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 498 DKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIE 557
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L NH+L+
Sbjct: 558 ELRTNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALV 613
Query: 631 MLITNNLCSLLQ 642
L+ NL + ++
Sbjct: 614 TLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|297493247|ref|XP_002700253.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 2 [Bos taurus]
gi|358420805|ref|XP_003584736.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 2 [Bos taurus]
gi|296470614|tpg|DAA12729.1| TPA: ubiquitin specific peptidase 9, X-linked isoform 2 [Bos
taurus]
Length = 2554
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/612 (59%), Positives = 448/612 (73%), Gaps = 57/612 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+I
Sbjct: 67 FPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTI 126
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTD+AV WK+ IH CI NN +L+EL V KL QD FPLL++L+M NP KFH
Sbjct: 127 SFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHI 186
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + SV N + +DE+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S
Sbjct: 187 YNGTRPCESVSSNVQLPEDELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGS 245
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+LTL T+ KYF+P++E
Sbjct: 246 ALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIE------------------------- 280
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 281 -----------------------MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 317
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+RVP QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH E
Sbjct: 318 ASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEE 377
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 378 EEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 437
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 438 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 497
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 498 DKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIE 557
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L NH+L+
Sbjct: 558 ELRTNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALV 613
Query: 631 MLITNNLCSLLQ 642
L+ NL + ++
Sbjct: 614 TLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|403263544|ref|XP_003924085.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 3 [Saimiri boliviensis boliviensis]
Length = 2069
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|348567388|ref|XP_003469481.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like [Cavia porcellus]
Length = 2546
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSASVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFLNGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410221820|gb|JAA08129.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN E KL+ K+RS ++D+ +LIG +YLWRV+ + ++IA RA
Sbjct: 732 LTENGMKCFERFFKAVNCRERKLI--AKRRSYMMDDLELIGLDYLWRVVIQSSDEIANRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+L+++ H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLKANQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 44/55 (80%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESSVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|297303640|ref|XP_002806244.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
[Macaca mulatta]
Length = 2545
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|297709764|ref|XP_002831594.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 1 [Pongo abelii]
Length = 2570
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410262990|gb|JAA19461.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
gi|410354935|gb|JAA44071.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2555
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410221818|gb|JAA08128.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2555
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|281347448|gb|EFB23032.1| hypothetical protein PANDA_001324 [Ailuropoda melanoleuca]
Length = 2565
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 459/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L+M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+P++E
Sbjct: 265 FLTLHTVKKYFLPVIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410262986|gb|JAA19459.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
gi|410354923|gb|JAA44065.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410221808|gb|JAA08123.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|395854980|ref|XP_003799953.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 3 [Otolemur garnettii]
Length = 2570
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL +D FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSEDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FGS+ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGSLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410354925|gb|JAA44066.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN E KL+ K+RS ++D+ +LIG +YLWRV+ + ++IA RA
Sbjct: 732 LTENGMKCFERFFKAVNCRERKLI--AKRRSYMMDDLELIGLDYLWRVVIQSSDEIANRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+L+++ H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLKANQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 44/55 (80%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESSVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410221816|gb|JAA08127.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|395854976|ref|XP_003799951.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 1 [Otolemur garnettii]
Length = 2554
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL +D FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSEDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FGS+ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGSLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|355704725|gb|EHH30650.1| hypothetical protein EGK_20401 [Macaca mulatta]
Length = 2570
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|403263542|ref|XP_003924084.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 2 [Saimiri boliviensis boliviensis]
Length = 2570
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|301755326|ref|XP_002913509.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 1 [Ailuropoda melanoleuca]
Length = 2554
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 459/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L+M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+P++E
Sbjct: 265 FLTLHTVKKYFLPVIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|291407352|ref|XP_002719892.1| PREDICTED: ubiquitin specific protease 9, X-linked-like isoform 1
[Oryctolagus cuniculus]
Length = 2570
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|301755328|ref|XP_002913510.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 2 [Ailuropoda melanoleuca]
Length = 2565
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 459/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L+M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+P++E
Sbjct: 265 FLTLHTVKKYFLPVIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|291407354|ref|XP_002719893.1| PREDICTED: ubiquitin specific protease 9, X-linked-like isoform 2
[Oryctolagus cuniculus]
Length = 2554
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410221806|gb|JAA08122.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|383421957|gb|AFH34192.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 4
[Macaca mulatta]
Length = 2553
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|145309311|ref|NP_001034680.2| probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform 4
[Homo sapiens]
gi|397488762|ref|XP_003815415.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 1 [Pan paniscus]
gi|119579816|gb|EAW59412.1| ubiquitin specific peptidase 9, X-linked, isoform CRA_f [Homo
sapiens]
gi|225000178|gb|AAI72429.1| Ubiquitin specific peptidase 9, X-linked [synthetic construct]
gi|410262984|gb|JAA19458.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
gi|410354921|gb|JAA44064.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|345806888|ref|XP_538002.3| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 1 [Canis lupus familiaris]
Length = 1872
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 459/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L+M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGALNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+P++E
Sbjct: 265 FLTLHTVKKYFLPVIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|426395623|ref|XP_004064067.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 1 [Gorilla gorilla gorilla]
gi|426395625|ref|XP_004064068.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 2 [Gorilla gorilla gorilla]
Length = 2554
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410262996|gb|JAA19464.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|297709766|ref|XP_002831595.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 2 [Pongo abelii]
Length = 2554
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410262988|gb|JAA19460.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
gi|410354931|gb|JAA44069.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|383408413|gb|AFH27420.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 4
[Macaca mulatta]
Length = 2554
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|383408407|gb|AFH27417.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 4
[Macaca mulatta]
Length = 2554
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410262994|gb|JAA19463.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|383408417|gb|AFH27422.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 4
[Macaca mulatta]
Length = 2554
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410354927|gb|JAA44067.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2553
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|383408405|gb|AFH27416.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 4
[Macaca mulatta]
Length = 2554
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|383408403|gb|AFH27415.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 4
[Macaca mulatta]
Length = 2554
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410262992|gb|JAA19462.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
gi|410354933|gb|JAA44070.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|355757294|gb|EHH60819.1| hypothetical protein EGM_18692 [Macaca fascicularis]
Length = 2570
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410221814|gb|JAA08126.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|145309309|ref|NP_001034679.2| probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform 3
[Homo sapiens]
gi|397488764|ref|XP_003815416.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 2 [Pan paniscus]
gi|317373496|sp|Q93008.3|USP9X_HUMAN RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase FAF-X;
AltName: Full=Deubiquitinating enzyme FAF-X; AltName:
Full=Fat facets in mammals; Short=hFAM; AltName:
Full=Fat facets protein-related, X-linked; AltName:
Full=Ubiquitin thioesterase FAF-X; AltName:
Full=Ubiquitin-specific protease 9, X chromosome;
AltName: Full=Ubiquitin-specific-processing protease
FAF-X
Length = 2570
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410221812|gb|JAA08125.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|403263540|ref|XP_003924083.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 1 [Saimiri boliviensis boliviensis]
Length = 2554
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|383408415|gb|AFH27421.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 4
[Macaca mulatta]
Length = 2554
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKL+ K+RS ++D+ +LIG +YLWRV+ + ++IA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLI--AKRRSYMMDDLELIGLDYLWRVVIQSSDEIANRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLK++ T+LGP+L+ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKDIYTNLGPRLKVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|383408409|gb|AFH27418.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 4
[Macaca mulatta]
Length = 2554
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|383408411|gb|AFH27419.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 4
[Macaca mulatta]
Length = 2554
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410221810|gb|JAA08124.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|380792029|gb|AFE67890.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 3,
partial [Macaca mulatta]
Length = 1822
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|390479670|ref|XP_002762843.2| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 1 [Callithrix jacchus]
Length = 2554
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPPLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLYTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|332243927|ref|XP_003271121.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
[Nomascus leucogenys]
Length = 2464
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410988369|ref|XP_004000458.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 1 [Felis catus]
Length = 2554
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L+M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+P++E
Sbjct: 265 FLTLHTVKKYFLPVIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPHFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410354929|gb|JAA44068.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410988371|ref|XP_004000459.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 2 [Felis catus]
Length = 2555
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L+M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+P++E
Sbjct: 265 FLTLHTVKKYFLPVIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPHFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|417407004|gb|JAA50137.1| Putative ubiquitin carboxyl-terminal hydrolase faf-x [Desmodus
rotundus]
Length = 2559
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/654 (57%), Positives = 460/654 (70%), Gaps = 62/654 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEEEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L+M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFISGSALNVQIIAALIKPFGQSYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNL-NSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL +S + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSSSRFSQTQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 630
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 737 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 794
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 795 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 835
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 680 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 734
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|380792791|gb|AFE68271.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 3,
partial [Macaca mulatta]
Length = 1822
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|380792561|gb|AFE68156.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 4,
partial [Macaca mulatta]
Length = 1822
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 93/139 (66%), Gaps = 10/139 (7%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKL+ K+RS ++D+ +LIG +YLWRV+ + ++IA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLI--AKRRSYMMDDLELIGLDYLWRVVIQSSDEIANRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQ---- 797
IDLLK++ T+LGP+L+ + H+ FI C DRL+A YDT+ + + + ARQ
Sbjct: 790 IDLLKDIYTNLGPRLKVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKNSINCARQEAIR 849
Query: 798 ---IWTALAQEAIFHCDRE 813
+ T L +E I CD +
Sbjct: 850 MVRVLTVL-KEYINECDSD 867
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|380792711|gb|AFE68231.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 3,
partial [Macaca mulatta]
Length = 1822
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|380792823|gb|AFE68287.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 3,
partial [Macaca mulatta]
Length = 1822
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|380792465|gb|AFE68108.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 3,
partial [Macaca mulatta]
Length = 1822
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410307034|gb|JAA32117.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 457/653 (69%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN E KL+ K+RS ++D+ +LIG +YLWRV+ + ++IA RA
Sbjct: 732 LTENGMKCFERFFKAVNCRERKLI--AKRRSYMMDDLELIGLDYLWRVVIQSSDEIANRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+L+++ H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLKANQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 44/55 (80%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESSVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410307030|gb|JAA32115.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2555
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 457/653 (69%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410307028|gb|JAA32114.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 457/653 (69%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410307020|gb|JAA32110.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 457/653 (69%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410307022|gb|JAA32111.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 457/653 (69%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410307018|gb|JAA32109.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 457/653 (69%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410307024|gb|JAA32112.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 457/653 (69%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410307026|gb|JAA32113.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 457/653 (69%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|444725252|gb|ELW65826.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X [Tupaia
chinensis]
Length = 2319
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/697 (55%), Positives = 473/697 (67%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCK--------FPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPVFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFLNGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+K+DA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKDDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVL DSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLLDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ + RS R +I+ L NH+L+ L T NL + ++ G+
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLATENLATYMESMRLYGR 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ + V G + Y H +E L R L + G
Sbjct: 633 DHEDYDPQTVRLG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
>gi|321464187|gb|EFX75197.1| hypothetical protein DAPPUDRAFT_306876 [Daphnia pulex]
Length = 2544
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/609 (59%), Positives = 443/609 (72%), Gaps = 63/609 (10%)
Query: 47 ISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVH 106
IS +RWVVPVLP+ ELE L+ A+I LC+ D SE CQRFF++GL+ SFTKILTDDAV
Sbjct: 2 ISRTRWVVPVLPKCELEILLDASINLCRRELDTRSEACQRFFQDGLTKSFTKILTDDAVS 61
Query: 107 SWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPV 166
SWK+ IH CI NC+KL+EL V KL QD FPLL++L +V NP KFHTFN + S P+
Sbjct: 62 SWKFEIHRCILRNCEKLIELCVSKLSQDWFPLLELLAVVLNPQCKFHTFNLTRPSELYPL 121
Query: 167 NSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIR 226
N+N D+EIFA+ D + RGWLVDLIN FG + GFQ+LLERFQ++ L++PV+FALIR
Sbjct: 122 NANGGDEEIFAKSPDI-RAPRGWLVDLINRFGKLNGFQLLLERFQSEQNLSLPVMFALIR 180
Query: 227 PFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 286
PFG +E LT+PTI KYF+PI+E
Sbjct: 181 PFGLCNEMLTIPTITKYFLPIVE------------------------------------- 203
Query: 287 AARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVK 346
++P L+NLTDEELKKE+KNE KND IS ++K K LA RVP QE+T++
Sbjct: 204 -----------VIPAFLDNLTDEELKKESKNEGKNDLISALVKFLKNLAQRVPGQEETLQ 252
Query: 347 QLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHR-----------HPEEEWL 395
LE+FRLK+ILRLLQISSFNGKMNALNE+NKVIA VA YPHR +EEWL
Sbjct: 253 NLEMFRLKMILRLLQISSFNGKMNALNEINKVIASVASYPHRTTGNSVVTGANETDEEWL 312
Query: 396 TPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGK 455
T +RMA W+K++ VL+IVL DSLHQPQYVEKLEKILRF+IKEKAL+L DLD VWA+QAGK
Sbjct: 313 TAERMAGWLKEHRVLQIVLADSLHQPQYVEKLEKILRFVIKEKALTLEDLDRVWASQAGK 372
Query: 456 HDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDG 515
H+AIVKNVH+LLAKLAWDFSP QLDHLF CFQASWT+A +KQ EKLLELIRRLAEDDKDG
Sbjct: 373 HEAIVKNVHDLLAKLAWDFSPEQLDHLFECFQASWTTAGKKQREKLLELIRRLAEDDKDG 432
Query: 516 VMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKS 575
VMA KVL LFW+LAHS DV +I++QA+ +H+KILDYSCSQ+RD QKT+WL C+EE +
Sbjct: 433 VMAHKVLTLFWNLAHSPDVPNEIIDQAMNAHVKILDYSCSQDRDTQKTVWLDRCVEEIRH 492
Query: 576 NPKWVVPALRQIKDICCLY-EPGQNLNSHAPL-SSRSHSSNNRQSIIDILIKNHSLIMLI 633
N WV+ AL+QI+DICCLY E N N A +SR+ RQ +++ L + H+L++LI
Sbjct: 493 N-VWVLQALKQIRDICCLYAETPANYNHAANAHASRAQHVLYRQEVVNRLQQQHALVILI 551
Query: 634 TNNLCSLLQ 642
T+NLCS ++
Sbjct: 552 TDNLCSYME 560
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 70/103 (67%), Gaps = 5/103 (4%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
+TESG+KCF++FFK+VN EGKLV + K +++ LIG +YLWRVI + +A +A
Sbjct: 668 MTESGMKCFDRFFKAVNAKEGKLVARRK-----MNDVGLIGLDYLWRVILFGSDPVAEKA 722
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGL 784
I LLKE T LGP+L ++ + H+ I C DRLRA +DT+ L
Sbjct: 723 IHLLKETYTSLGPRLVNNQVEIHEDLIGSCSDRLRASHDTLPL 765
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+ARQIW L + AIF DREACFKWFSKLM +EPDLDP++ ++FFE +L +P
Sbjct: 611 PQARQIWHCLVERAIFVADREACFKWFSKLMGEEPDLDPEVNREFFEAQILQLDP 665
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 40/65 (61%), Gaps = 11/65 (16%)
Query: 627 HSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHR-----------HPEEEW 675
+L M + LLQISSFNGKMNALNE+NKVIA VA YPHR +EEW
Sbjct: 252 QNLEMFRLKMILRLLQISSFNGKMNALNEINKVIASVASYPHRTTGNSVVTGANETDEEW 311
Query: 676 LTPDR 680
LT +R
Sbjct: 312 LTAER 316
>gi|351703043|gb|EHB05962.1| Putative ubiquitin carboxyl-terminal hydrolase FAF-X
[Heterocephalus glaber]
Length = 2568
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/656 (57%), Positives = 458/656 (69%), Gaps = 68/656 (10%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGRGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDIL---TMVFNPCNKFHTFNSNQQSISVPVNSNI 170
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + +
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLDPRAMALNPHCKFHIYNGTRPCESVSSSVQL 205
Query: 171 ADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQ 230
+DE+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ
Sbjct: 206 PEDELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQ 264
Query: 231 VHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARV 290
+E+LTL T+ KYF+PI+E
Sbjct: 265 CYEFLTLHTVKKYFLPIIE----------------------------------------- 283
Query: 291 PHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEI 350
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QEDTVK LEI
Sbjct: 284 -------MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEDTVKNLEI 336
Query: 351 FRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDN 407
FRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ N
Sbjct: 337 FRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQN 396
Query: 408 NVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELL 467
N+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LL
Sbjct: 397 NILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLL 456
Query: 468 AKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWS 527
AKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+
Sbjct: 457 AKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWN 516
Query: 528 LAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQI 587
LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI
Sbjct: 517 LAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQI 576
Query: 588 KDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
++IC L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 REICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 628
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 735 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 792
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 793 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 833
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 678 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 732
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 345 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 388
>gi|380792811|gb|AFE68281.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 3,
partial [Macaca mulatta]
Length = 1822
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 457/653 (69%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410221822|gb|JAA08130.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/653 (56%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH EEEWLT ++MA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPEEEEWLTAEQMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVL+DSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLQDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNE+NKVI+ V+YY HRH EEEWLT ++
Sbjct: 342 LLQISSFNGKMNALNEINKVISSVSYYTHRHSNPEEEEWLTAEQ 385
>gi|432119561|gb|ELK38530.1| Putative ubiquitin carboxyl-terminal hydrolase FAF-X [Myotis
davidii]
Length = 2554
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/612 (59%), Positives = 448/612 (73%), Gaps = 57/612 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+I
Sbjct: 67 FPHTDLAKLDDMINRPRWVVPVLPKGELEMLLEAAIDLSKKGLDVKSEACQRFFRDGLTI 126
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTD+AV WK+ IH CI NN +L+EL V KL QD FPLL++L+M NP KFH
Sbjct: 127 SFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHI 186
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + S+ + + +DE+FAR D ++ +GWLVDL+N FG++ GFQIL +RF + S
Sbjct: 187 YNGTRPCESMSSSVQLPEDELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFISGS 245
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+LTL T+ KYF+P++E
Sbjct: 246 ALNVQIIAALIKPFGQSYEFLTLHTVKKYFLPVIE------------------------- 280
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 281 -----------------------MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 317
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+RVP QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH E
Sbjct: 318 ASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEE 377
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 378 EEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 437
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 438 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 497
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 498 DKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIE 557
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L NH+L+
Sbjct: 558 ELRTNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALV 613
Query: 631 MLITNNLCSLLQ 642
L+ NL + ++
Sbjct: 614 TLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|417407020|gb|JAA50145.1| Putative ubiquitin carboxyl-terminal hydrolase faf-x [Desmodus
rotundus]
Length = 2597
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/655 (57%), Positives = 460/655 (70%), Gaps = 63/655 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEEEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L+M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLSMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFISGSALNVQIIAALIKPFGQSYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMAD-KVLNLFWSLA 529
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LA
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAXHKVLNLLWNLA 516
Query: 530 HSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKD 589
HSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++
Sbjct: 517 HSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIRE 576
Query: 590 ICCLY-EPGQNL-NSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
IC L+ E QNL +S + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 ICSLFGEAPQNLSSSRFSQTQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 631
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 738 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 795
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 796 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 836
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 681 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 735
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|380792559|gb|AFE68155.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 4,
partial [Macaca mulatta]
Length = 1822
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/653 (56%), Positives = 455/653 (69%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + + N+ + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCELISSNAQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FA D + +GWLVDLIN FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFACSSDP-RTPKGWLVDLINKFGTLNGFQILHDRFFNGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+L+ T+ KYF+P++E
Sbjct: 265 FLSQHTVKKYFIPVIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
IVP +LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----IVPHLLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|410307032|gb|JAA32116.1| ubiquitin specific peptidase 9, X-linked [Pan troglodytes]
Length = 2554
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/653 (56%), Positives = 457/653 (69%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH EEEWLT ++MA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPEEEEWLTAEQMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVL+DSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLQDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNE+NKVI+ V+YY HRH EEEWLT ++
Sbjct: 342 LLQISSFNGKMNALNEINKVISSVSYYTHRHSNPEEEEWLTAEQ 385
>gi|260795991|ref|XP_002592988.1| hypothetical protein BRAFLDRAFT_275724 [Branchiostoma floridae]
gi|229278212|gb|EEN48999.1| hypothetical protein BRAFLDRAFT_275724 [Branchiostoma floridae]
Length = 2574
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/617 (59%), Positives = 446/617 (72%), Gaps = 60/617 (9%)
Query: 30 GCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFR 89
G FP +LA LD I+ RWVVPVLP+ ELE L++A+IELCK + D SE CQRFFR
Sbjct: 69 GVEPDFPNAELAKLDDMINRPRWVVPVLPKGELEVLLEASIELCKKSLDTRSEACQRFFR 128
Query: 90 EGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPC 149
+GL+ISFTKILTDDAV WK+ IH CI+ N +KL+EL V KL QD FPLLD+L M NP
Sbjct: 129 DGLTISFTKILTDDAVSGWKFEIHRCIFKNAEKLIELCVTKLSQDWFPLLDLLAMALNPH 188
Query: 150 NKFHTFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLER 209
KFH +N + S +VPV + +ADDE+FARP D +N +GWLVDLIN FG + GF+IL ER
Sbjct: 189 CKFHIYNGTRPSETVPVGTQLADDELFARPPDP-RNPKGWLVDLINRFGQLEGFKILKER 247
Query: 210 FQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKN 269
F L +P+I ALI+P+GQ +E LT T+ +YF PI+ I
Sbjct: 248 FL-AGHLNVPIIAALIKPWGQCYELLTPHTVEEYFQPIIGI------------------- 287
Query: 270 ESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIK 329
VP L+ LTDEELKKEAKNE+KND +S IIK
Sbjct: 288 -----------------------------VPTFLDGLTDEELKKEAKNEAKNDQLSQIIK 318
Query: 330 SCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRH 389
+ K LA+RVP+QE+T+K LE+FRLK+ILRLLQISSFNGKMNALNEVNKVIA V+YY HRH
Sbjct: 319 ALKCLASRVPNQEETMKNLEMFRLKMILRLLQISSFNGKMNALNEVNKVIASVSYYTHRH 378
Query: 390 P---EEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLD 446
E+EWLT +RMA+WI+ NNVL IVLRDSLHQPQYVEKLEKILRF+IKEKAL++GDLD
Sbjct: 379 SGMEEDEWLTAERMAEWIQQNNVLSIVLRDSLHQPQYVEKLEKILRFVIKEKALTMGDLD 438
Query: 447 AVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIR 506
+WAAQAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ SW A++KQ EKLLELIR
Sbjct: 439 NIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWKDASKKQREKLLELIR 498
Query: 507 RLAEDDKDGVMADK-VLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIW 565
RLAEDDKDGVMA K VLNL W+LAHS+DV TDIM+QAL++H+KILDYSCSQ+RD QKT W
Sbjct: 499 RLAEDDKDGVMAHKVVLNLLWNLAHSEDVPTDIMDQALSAHIKILDYSCSQDRDAQKTQW 558
Query: 566 LQTCIEEFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILI 624
+ ++E K N +WV+PAL+QI++IC L+ E QN N HA RS R +I+ L
Sbjct: 559 IDRFVDELK-NDQWVLPALKQIREICQLFGEAPQNYN-HA---QRSPHVYYRHEVINQLQ 613
Query: 625 KNHSLIMLITNNLCSLL 641
+ HSL+ L+ NL S +
Sbjct: 614 QTHSLVTLVAENLASYM 630
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCF++FFK+VN+ E KLV K+R+ ++DN +LIG EY+WRVI ++IA +A
Sbjct: 738 LTENGIKCFDRFFKAVNLKENKLV--CKRRTYMMDNLELIGLEYIWRVILLGQDEIAAKA 795
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLL+E T+LGP+LQ++ H FI C DRL+A YDTI
Sbjct: 796 IDLLRETYTNLGPRLQTNQVDIHVDFIQSCFDRLKAAYDTI 836
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A+F DREACFKWFSKLM DEPDLDP++ +DFFE +VL +P
Sbjct: 681 PQAKQIWNCLAENAVFVSDREACFKWFSKLMGDEPDLDPEINRDFFEGNVLQLDP 735
>gi|350595991|ref|XP_003360581.2| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 1 [Sus scrofa]
Length = 2568
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/611 (58%), Positives = 445/611 (72%), Gaps = 57/611 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+I
Sbjct: 66 FPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVQSEACQRFFRDGLTI 125
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKIL D+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 126 SFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHI 185
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + S+ ++ +++DE+FAR D ++ +GWLVDLIN FG++ GFQIL +RF N S
Sbjct: 186 YNGTRPCESISSSAQLSEDELFARSSDP-RSPKGWLVDLINKFGTLNGFQILHDRFINGS 244
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+L+ T+ KYF+PI+E
Sbjct: 245 ALNVQIIAALIKPFGQCYEFLSQHTVKKYFIPIIE------------------------- 279
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
I+P+ LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 280 -----------------------IIPQFLENLTDEELKKEAKNETKNDALSMIIKSLKNL 316
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+R+P QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH E
Sbjct: 317 ASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHGNPEE 376
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ N +L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 377 EEWLTAERMAEWIQQNKILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLEDLDNIWAA 436
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
Q+GKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 437 QSGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 496
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 497 DKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIE 556
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L NH+L+
Sbjct: 557 ELRNNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALV 612
Query: 631 MLITNNLCSLL 641
L+ NL + +
Sbjct: 613 TLVAENLAAYM 623
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 731 LTENGMKCFERFFKAVNCREGKLV--AKRRTYMMDDLELIGLDYLWRVVMQSNDDIASRA 788
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 789 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 829
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 45/56 (80%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPI 848
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 674 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDPF 729
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNE+NKVI+ V+YY HRH EEEWLT +R
Sbjct: 341 LLQISSFNGKMNALNEINKVISSVSYYTHRHGNPEEEEWLTAER 384
>gi|431899714|gb|ELK07666.1| Putative ubiquitin carboxyl-terminal hydrolase FAF-X [Pteropus
alecto]
Length = 1541
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/652 (56%), Positives = 456/652 (69%), Gaps = 65/652 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCK--------FPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPFQQNQTSSPDSSNENSPATPPDEQGQGDAPPLHEIEEPVFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRF+R+GL+ISFTKIL D+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFYRDGLTISFTKILMDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV ++ + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSTSAQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR +D ++ +GWLVDLIN FG + GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSLDP-RSPKGWLVDLINKFGILNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+L+ T+ KYF+PI+E
Sbjct: 265 FLSQHTVKKYFIPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
IVP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+R+ QE+T+K LEIFRL
Sbjct: 281 ----IVPQFLENLTDEELKKEAKNETKNDALSMIIKSLKNLASRISGQEETIKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEINKVISNVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAK+
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKV 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDAQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLL 641
C L+ E QNL+ + RS + R +I+ L NH+L+ L+ NL + +
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHAFYRHDLINQLQHNHALVTLVAENLAAYM 624
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 92/139 (66%), Gaps = 10/139 (7%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+RS ++D+ +LIG +YLW+V+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRSYMMDDLELIGLDYLWKVVIQSNDDIANRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQ---- 797
IDLLKE+ T+LGP+LQ + H+ FI C DRL+ YDT+ + + + ARQ
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKVSYDTLCVLDGDKDSVNCARQEAIR 849
Query: 798 ---IWTALAQEAIFHCDRE 813
+ T L +E I CD +
Sbjct: 850 MVRVLTVL-REYINECDSD 867
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNE+NKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEINKVISNVSYYTHRHGNPEEEEWLTAER 385
>gi|350595993|ref|XP_003484218.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 2 [Sus scrofa]
Length = 2552
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/611 (58%), Positives = 445/611 (72%), Gaps = 57/611 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+I
Sbjct: 66 FPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVQSEACQRFFRDGLTI 125
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKIL D+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 126 SFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHI 185
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + S+ ++ +++DE+FAR D ++ +GWLVDLIN FG++ GFQIL +RF N S
Sbjct: 186 YNGTRPCESISSSAQLSEDELFARSSDP-RSPKGWLVDLINKFGTLNGFQILHDRFINGS 244
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+L+ T+ KYF+PI+E
Sbjct: 245 ALNVQIIAALIKPFGQCYEFLSQHTVKKYFIPIIE------------------------- 279
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
I+P+ LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 280 -----------------------IIPQFLENLTDEELKKEAKNETKNDALSMIIKSLKNL 316
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+R+P QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH E
Sbjct: 317 ASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHGNPEE 376
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ N +L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 377 EEWLTAERMAEWIQQNKILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLEDLDNIWAA 436
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
Q+GKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 437 QSGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 496
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 497 DKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIE 556
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L NH+L+
Sbjct: 557 ELRNNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALV 612
Query: 631 MLITNNLCSLL 641
L+ NL + +
Sbjct: 613 TLVAENLAAYM 623
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 731 LTENGMKCFERFFKAVNCREGKLV--AKRRTYMMDDLELIGLDYLWRVVMQSNDDIASRA 788
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 789 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 829
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 45/56 (80%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPI 848
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 674 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDPF 729
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNE+NKVI+ V+YY HRH EEEWLT +R
Sbjct: 341 LLQISSFNGKMNALNEINKVISSVSYYTHRHGNPEEEEWLTAER 384
>gi|119579815|gb|EAW59411.1| ubiquitin specific peptidase 9, X-linked, isoform CRA_e [Homo
sapiens]
Length = 2493
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/600 (60%), Positives = 441/600 (73%), Gaps = 57/600 (9%)
Query: 47 ISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVH 106
I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV
Sbjct: 2 INRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVS 61
Query: 107 SWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPV 166
WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV
Sbjct: 62 GWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSS 121
Query: 167 NSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIR 226
+ + +DE+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+
Sbjct: 122 SVQLPEDELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIK 180
Query: 227 PFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 286
PFGQ +E+LTL T+ KYF+PI+E
Sbjct: 181 PFGQCYEFLTLHTVKKYFLPIIE------------------------------------- 203
Query: 287 AARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVK 346
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK
Sbjct: 204 -----------MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVK 252
Query: 347 QLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKW 403
LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+W
Sbjct: 253 NLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEW 312
Query: 404 IKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNV 463
I+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNV
Sbjct: 313 IQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNV 372
Query: 464 HELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLN 523
H+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLN
Sbjct: 373 HDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLN 432
Query: 524 LFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPA 583
L W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PA
Sbjct: 433 LLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPA 492
Query: 584 LRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
L+QI++IC L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 493 LKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 548
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 655 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 712
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 713 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 753
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 598 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 652
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 265 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 308
>gi|119579814|gb|EAW59410.1| ubiquitin specific peptidase 9, X-linked, isoform CRA_d [Homo
sapiens]
Length = 2477
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/600 (60%), Positives = 441/600 (73%), Gaps = 57/600 (9%)
Query: 47 ISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVH 106
I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV
Sbjct: 2 INRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVS 61
Query: 107 SWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPV 166
WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV
Sbjct: 62 GWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSS 121
Query: 167 NSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIR 226
+ + +DE+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+
Sbjct: 122 SVQLPEDELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIK 180
Query: 227 PFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 286
PFGQ +E+LTL T+ KYF+PI+E
Sbjct: 181 PFGQCYEFLTLHTVKKYFLPIIE------------------------------------- 203
Query: 287 AARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVK 346
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK
Sbjct: 204 -----------MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVK 252
Query: 347 QLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKW 403
LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+W
Sbjct: 253 NLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEW 312
Query: 404 IKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNV 463
I+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNV
Sbjct: 313 IQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNV 372
Query: 464 HELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLN 523
H+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLN
Sbjct: 373 HDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLN 432
Query: 524 LFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPA 583
L W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PA
Sbjct: 433 LLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPA 492
Query: 584 LRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
L+QI++IC L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 493 LKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 548
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 655 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 712
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 713 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 753
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 598 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 652
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 265 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 308
>gi|119579813|gb|EAW59409.1| ubiquitin specific peptidase 9, X-linked, isoform CRA_c [Homo
sapiens]
Length = 2490
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/600 (60%), Positives = 441/600 (73%), Gaps = 57/600 (9%)
Query: 47 ISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVH 106
I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV
Sbjct: 2 INRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVS 61
Query: 107 SWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPV 166
WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV
Sbjct: 62 GWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSS 121
Query: 167 NSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIR 226
+ + +DE+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+
Sbjct: 122 SVQLPEDELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIK 180
Query: 227 PFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 286
PFGQ +E+LTL T+ KYF+PI+E
Sbjct: 181 PFGQCYEFLTLHTVKKYFLPIIE------------------------------------- 203
Query: 287 AARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVK 346
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK
Sbjct: 204 -----------MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVK 252
Query: 347 QLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKW 403
LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+W
Sbjct: 253 NLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEW 312
Query: 404 IKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNV 463
I+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNV
Sbjct: 313 IQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNV 372
Query: 464 HELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLN 523
H+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLN
Sbjct: 373 HDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLN 432
Query: 524 LFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPA 583
L W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PA
Sbjct: 433 LLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPA 492
Query: 584 LRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
L+QI++IC L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 493 LKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 548
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 655 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 712
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 713 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 753
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 598 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 652
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 265 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 308
>gi|380792793|gb|AFE68272.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 3,
partial [Macaca mulatta]
Length = 1822
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/653 (56%), Positives = 457/653 (69%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+R+ Q++T++ LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRISGQDETIQNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH EEEWLT +RMA+WI+ N++L
Sbjct: 337 KMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPEEEEWLTAERMAEWIQQNSIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVL+DSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLQDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNE+NKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEINKVISSVSYYTHRHSNPEEEEWLTAER 385
>gi|214010997|gb|ACJ61271.1| Y-linked ubiquitin-specific protease 9 [Bos taurus]
Length = 2521
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/656 (56%), Positives = 455/656 (69%), Gaps = 58/656 (8%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+I
Sbjct: 35 FPHADLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTI 94
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKIL D+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 95 SFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHV 154
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + SV ++ +DE+FA D ++ +GWLVDLIN FG + GFQIL +RF N S
Sbjct: 155 YNGTRPCESVSTSAQSPEDELFAHSSDP-RSPKGWLVDLINKFGILNGFQILHDRFINGS 213
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+L T+ KYF+PI+E
Sbjct: 214 ALNVQIIAALIKPFGQCYEFLNQHTVRKYFIPIIE------------------------- 248
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
IVP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 249 -----------------------IVPQFLENLTDEELKKEAKNETKNDALSMIIKSLKNL 285
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+R+P QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH E
Sbjct: 286 ASRIPDQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHGNPEE 345
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 346 EEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 405
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFS QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 406 QAGKHEAIVKNVHDLLAKLAWDFSAEQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 465
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 466 DKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIE 525
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ S RS R +I L NH+L+
Sbjct: 526 ELRTNDKWVIPALKQIREICSLFGEAPQNLSQ----SQRSPHVFYRHDLISQLQHNHALV 581
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
L+ NL + + + + + + V G + Y H +E L R L + G
Sbjct: 582 TLVAENLATYMDSTRLYARDHEDYDPQTVRLG-SRYSHVQEVQERLNFLRFLLKDG 636
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 700 LTENGMKCFERFFKAVNCREGKLV--TKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 757
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 758 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 798
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPI 848
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + K+FFE +VL +P
Sbjct: 643 PQAKQIWKCLAENAVYVCDREACFKWYSKLMGDEPDLDPDINKEFFESNVLQLDPF 698
>gi|224458400|ref|NP_001138981.1| probable ubiquitin carboxyl-terminal hydrolase FAF-Y [Bos taurus]
gi|223469540|gb|ACM90113.1| Usp9y [Bos taurus]
Length = 2552
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/656 (56%), Positives = 455/656 (69%), Gaps = 58/656 (8%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+I
Sbjct: 66 FPHADLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTI 125
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKIL D+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 126 SFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHV 185
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + SV ++ +DE+FA D ++ +GWLVDLIN FG + GFQIL +RF N S
Sbjct: 186 YNGTRPCESVSTSAQSPEDELFAHSSDP-RSPKGWLVDLINKFGILNGFQILHDRFINGS 244
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+L T+ KYF+PI+E
Sbjct: 245 ALNVQIIAALIKPFGQCYEFLNQHTVRKYFIPIIE------------------------- 279
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
IVP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 280 -----------------------IVPQFLENLTDEELKKEAKNETKNDALSMIIKSLKNL 316
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+R+P QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH E
Sbjct: 317 ASRIPDQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHGNPEE 376
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 377 EEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 436
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFS QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 437 QAGKHEAIVKNVHDLLAKLAWDFSAEQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 496
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 497 DKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIE 556
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ S RS R +I L NH+L+
Sbjct: 557 ELRTNDKWVIPALKQIREICSLFGEAPQNLSQ----SQRSPHVFYRHDLISQLQHNHALV 612
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
L+ NL + + + + + + V G + Y H +E L R L + G
Sbjct: 613 TLVAENLATYMDSTRLYARDHEDYDPQTVRLG-SRYSHVQEVQERLNFLRFLLKDG 667
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 731 LTENGMKCFERFFKAVNCREGKLV--TKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 788
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 789 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 829
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPI 848
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + K+FFE +VL +P
Sbjct: 674 PQAKQIWKCLAENAVYVCDREACFKWYSKLMGDEPDLDPDINKEFFESNVLQLDPF 729
>gi|426256868|ref|XP_004022058.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 2 [Ovis aries]
Length = 2547
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/612 (59%), Positives = 443/612 (72%), Gaps = 64/612 (10%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+I
Sbjct: 67 FPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTI 126
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTD+AV WK+ IH L+EL V KL QD FPLL++L+M NP KFH
Sbjct: 127 SFTKILTDEAVSGWKFEIH-------VSLVELCVAKLSQDWFPLLELLSMALNPHCKFHI 179
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + SV N + +DE+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S
Sbjct: 180 YNGTRPCESVSSNVQLPEDELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGS 238
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+LTL T+ KYF+P++E
Sbjct: 239 ALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIE------------------------- 273
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 274 -----------------------MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 310
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+RVP QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH E
Sbjct: 311 ASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEE 370
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 371 EEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 430
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 431 QAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 490
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 491 DKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIE 550
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L NH+L+
Sbjct: 551 ELRTNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALV 606
Query: 631 MLITNNLCSLLQ 642
L+ NL + ++
Sbjct: 607 TLVAENLATYME 618
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 725 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 782
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 783 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 823
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 668 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 722
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 335 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 378
>gi|395854978|ref|XP_003799952.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 2 [Otolemur garnettii]
Length = 2547
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/653 (56%), Positives = 453/653 (69%), Gaps = 72/653 (11%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
L+EL V KL +D FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 -------VSLVELCVAKLSEDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 198
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FGS+ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 199 ELFARSPDP-RSPKGWLVDLLNKFGSLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 257
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 258 FLTLHTVKKYFLPIIE-------------------------------------------- 273
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 274 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 329
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 330 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 389
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 390 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 449
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 450 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 509
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 510 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 569
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 570 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 618
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 725 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 782
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 783 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 823
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 668 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 722
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 335 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 378
>gi|74319833|ref|NP_004645.2| probable ubiquitin carboxyl-terminal hydrolase FAF-Y [Homo sapiens]
gi|229462772|sp|O00507.2|USP9Y_HUMAN RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;
AltName: Full=Deubiquitinating enzyme FAF-Y; AltName:
Full=Fat facets protein-related, Y-linked; AltName:
Full=Ubiquitin thioesterase FAF-Y; AltName:
Full=Ubiquitin-specific protease 9, Y chromosome;
AltName: Full=Ubiquitin-specific-processing protease
FAF-Y
gi|119612014|gb|EAW91608.1| ubiquitin specific peptidase 9, Y-linked (fat facets-like,
Drosophila), isoform CRA_b [Homo sapiens]
gi|225356494|gb|AAI56545.1| Ubiquitin specific peptidase 9, Y-linked (fat facets-like,
Drosophila) [synthetic construct]
Length = 2555
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/611 (58%), Positives = 443/611 (72%), Gaps = 57/611 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP +LA LD I+ RWVVPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+I
Sbjct: 68 FPHTELANLDDMINRPRWVVPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTI 127
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKIL D+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 128 SFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHI 187
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + + N+ + +DE+FAR D ++ +GWLVDLIN FG++ GFQIL +RF N S
Sbjct: 188 YNGTRPCELISSNAQLPEDELFARSSDP-RSPKGWLVDLINKFGTLNGFQILHDRFFNGS 246
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L I +I ALI+PFGQ +E+L+ T+ KYF+P++E
Sbjct: 247 ALNIQIIAALIKPFGQCYEFLSQHTLKKYFIPVIE------------------------- 281
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
IVP +LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 282 -----------------------IVPHLLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 318
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+R+ Q++T+K LEIFRLK+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH E
Sbjct: 319 ASRISGQDETIKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPEE 378
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVL+DSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 379 EEWLTAERMAEWIQQNNILSIVLQDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 438
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 439 QAGKHEAIVKNVHDLLAKLAWDFSPGQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 498
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LA SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 499 DKDGVMAHKVLNLLWNLAQSDDVPVDIMDLALSAHIKILDYSCSQDRDAQKIQWIDHFIE 558
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L +NH+L+
Sbjct: 559 ELRTNDKWVIPALKQIREICSLFGEASQNLSQ----TQRSPHIFYRHDLINQLQQNHALV 614
Query: 631 MLITNNLCSLL 641
L+ NL + +
Sbjct: 615 TLVAENLATYM 625
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN E KL+ K+RS ++D+ +LIG +YLWRV+ + ++IA RA
Sbjct: 733 LTENGMKCFERFFKAVNCRERKLI--AKRRSYMMDDLELIGLDYLWRVVIQSSDEIANRA 790
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+L+++ H+ FI C DRL+A YDT+
Sbjct: 791 IDLLKEIYTNLGPRLKANQVVIHEDFIQSCFDRLKASYDTL 831
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 676 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 730
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 615 NRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP--- 671
+R S D IKN + L + LLQISSFNGKMNALNE+NKVI+ V+YY HRH
Sbjct: 320 SRISGQDETIKNLEIFRL--KMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPE 377
Query: 672 EEEWLTPDR 680
EEEWLT +R
Sbjct: 378 EEEWLTAER 386
>gi|410988373|ref|XP_004000460.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
isoform 3 [Felis catus]
Length = 2547
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/653 (56%), Positives = 453/653 (69%), Gaps = 72/653 (11%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
L+EL V KL QD FPLL++L+M NP KFH +N + SV + + +D
Sbjct: 146 -------VSLVELCVAKLSQDWFPLLELLSMALNPHCKFHIYNGTRPCESVSSSVQLPED 198
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 199 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 257
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+P++E
Sbjct: 258 FLTLHTVKKYFLPVIE-------------------------------------------- 273
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 274 ----MVPHFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 329
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 330 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 389
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 390 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 449
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 450 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 509
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 510 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 569
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 570 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 618
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 725 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 782
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 783 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 823
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 668 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 722
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 335 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 378
>gi|119612013|gb|EAW91607.1| ubiquitin specific peptidase 9, Y-linked (fat facets-like,
Drosophila), isoform CRA_a [Homo sapiens]
Length = 1584
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/611 (58%), Positives = 443/611 (72%), Gaps = 57/611 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP +LA LD I+ RWVVPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+I
Sbjct: 68 FPHTELANLDDMINRPRWVVPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTI 127
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKIL D+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 128 SFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHI 187
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + + N+ + +DE+FAR D ++ +GWLVDLIN FG++ GFQIL +RF N S
Sbjct: 188 YNGTRPCELISSNAQLPEDELFARSSDP-RSPKGWLVDLINKFGTLNGFQILHDRFFNGS 246
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L I +I ALI+PFGQ +E+L+ T+ KYF+P++E
Sbjct: 247 ALNIQIIAALIKPFGQCYEFLSQHTLKKYFIPVIE------------------------- 281
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
IVP +LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 282 -----------------------IVPHLLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 318
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+R+ Q++T+K LEIFRLK+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH E
Sbjct: 319 ASRISGQDETIKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPEE 378
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVL+DSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 379 EEWLTAERMAEWIQQNNILSIVLQDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 438
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 439 QAGKHEAIVKNVHDLLAKLAWDFSPGQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 498
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LA SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 499 DKDGVMAHKVLNLLWNLAQSDDVPVDIMDLALSAHIKILDYSCSQDRDAQKIQWIDHFIE 558
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L +NH+L+
Sbjct: 559 ELRTNDKWVIPALKQIREICSLFGEASQNLSQ----TQRSPHIFYRHDLINQLQQNHALV 614
Query: 631 MLITNNLCSLL 641
L+ NL + +
Sbjct: 615 TLVAENLATYM 625
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN E KL+ K+RS ++D+ +LIG +YLWRV+ + ++IA RA
Sbjct: 733 LTENGMKCFERFFKAVNCRERKLI--AKRRSYMMDDLELIGLDYLWRVVIQSSDEIANRA 790
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+L+++ H+ FI C DRL+A YDT+
Sbjct: 791 IDLLKEIYTNLGPRLKANQVVIHEDFIQSCFDRLKASYDTL 831
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 676 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 730
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 615 NRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP--- 671
+R S D IKN + L + LLQISSFNGKMNALNE+NKVI+ V+YY HRH
Sbjct: 320 SRISGQDETIKNLEIFRL--KMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPE 377
Query: 672 EEEWLTPDR 680
EEEWLT +R
Sbjct: 378 EEEWLTAER 386
>gi|2181869|emb|CAA73941.1| DFFRY [Homo sapiens]
Length = 2070
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/611 (58%), Positives = 443/611 (72%), Gaps = 57/611 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP +LA LD I+ RWVVPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+I
Sbjct: 68 FPHTELANLDDMINRPRWVVPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTI 127
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKIL D+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 128 SFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHI 187
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + + N+ + ++E+FAR D ++ +GWLVDLIN FG++ GFQIL +RF N S
Sbjct: 188 YNGTRPCELISSNAQLPEEELFARSSDP-RSPKGWLVDLINKFGTLNGFQILHDRFFNGS 246
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L I +I ALI+PFGQ +E+L+ T+ KYF+P++E
Sbjct: 247 ALNIQIIAALIKPFGQCYEFLSQHTLKKYFIPVIE------------------------- 281
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
IVP +LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 282 -----------------------IVPHLLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 318
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+R+ Q++T+K LEIFRLK+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH E
Sbjct: 319 ASRISGQDETIKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPEE 378
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVL+DSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 379 EEWLTAERMAEWIQQNNILSIVLQDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 438
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 439 QAGKHEAIVKNVHDLLAKLAWDFSPGQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 498
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LA SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 499 DKDGVMAHKVLNLLWNLAQSDDVPVDIMDLALSAHIKILDYSCSQDRDAQKIQWIDHFIE 558
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L +NH+L+
Sbjct: 559 ELRTNDKWVIPALKQIREICSLFGEASQNLSQ----TQRSPHIFYRHDLINQLQQNHALV 614
Query: 631 MLITNNLCSLL 641
L+ NL + +
Sbjct: 615 TLVAENLATYM 625
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN E KL+ K+RS ++D+ +LIG +YLWRV+ + ++IA RA
Sbjct: 733 LTENGMKCFERFFKAVNCRERKLI--AKRRSYMMDDLELIGLDYLWRVVIQSSDEIANRA 790
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+L+++ H+ FI C DRL+A YDT+
Sbjct: 791 IDLLKEIYTNLGPRLKANQVVIHEDFIQSCFDRLKASYDTL 831
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 676 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 730
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 615 NRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP--- 671
+R S D IKN + L + LLQISSFNGKMNALNE+NKVI+ V+YY HRH
Sbjct: 320 SRISGQDETIKNLEIFRL--KMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPE 377
Query: 672 EEEWLTPDR 680
EEEWLT +R
Sbjct: 378 EEEWLTAER 386
>gi|2181867|emb|CAA73940.1| DFFRY [Homo sapiens]
Length = 2555
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/611 (58%), Positives = 443/611 (72%), Gaps = 57/611 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP +LA LD I+ RWVVPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+I
Sbjct: 68 FPHTELANLDDMINRPRWVVPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTI 127
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKIL D+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 128 SFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHI 187
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + + N+ + ++E+FAR D ++ +GWLVDLIN FG++ GFQIL +RF N S
Sbjct: 188 YNGTRPCELISSNAQLPEEELFARSSDP-RSPKGWLVDLINKFGTLNGFQILHDRFFNGS 246
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L I +I ALI+PFGQ +E+L+ T+ KYF+P++E
Sbjct: 247 ALNIQIIAALIKPFGQCYEFLSQHTLKKYFIPVIE------------------------- 281
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
IVP +LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 282 -----------------------IVPHLLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 318
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+R+ Q++T+K LEIFRLK+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH E
Sbjct: 319 ASRISGQDETIKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPEE 378
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVL+DSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 379 EEWLTAERMAEWIQQNNILSIVLQDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 438
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 439 QAGKHEAIVKNVHDLLAKLAWDFSPGQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 498
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LA SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 499 DKDGVMAHKVLNLLWNLAQSDDVPVDIMDLALSAHIKILDYSCSQDRDAQKIQWIDHFIE 558
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L +NH+L+
Sbjct: 559 ELRTNDKWVIPALKQIREICSLFGEASQNLSQ----TQRSPHIFYRHDLINQLQQNHALV 614
Query: 631 MLITNNLCSLL 641
L+ NL + +
Sbjct: 615 TLVAENLATYM 625
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN E KL+ K+RS ++D+ +LIG +YLWRV+ + ++IA RA
Sbjct: 733 LTENGMKCFERFFKAVNCRERKLI--AKRRSYMMDDLELIGLDYLWRVVIQSSDEIANRA 790
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+L+++ H+ FI C DRL+A YDT+
Sbjct: 791 IDLLKEIYTNLGPRLKANQVVIHEDFIQSCFDRLKASYDTL 831
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 676 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 730
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 615 NRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP--- 671
+R S D IKN + L + LLQISSFNGKMNALNE+NKVI+ V+YY HRH
Sbjct: 320 SRISGQDETIKNLEIFRL--KMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPE 377
Query: 672 EEEWLTPDR 680
EEEWLT +R
Sbjct: 378 EEEWLTAER 386
>gi|1666075|emb|CAA66942.1| ubiquitin hydrolase [Homo sapiens]
Length = 2547
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/653 (56%), Positives = 452/653 (69%), Gaps = 72/653 (11%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
C L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RC-------LVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 198
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 199 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 257
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 258 FLTLHTVKKYFLPIIE-------------------------------------------- 273
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 274 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 329
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 330 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 389
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 390 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 449
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDH F CF+AS T+A++KQ EKLLELIRRLAEDDKDGVMA +VLNL W+LAH
Sbjct: 450 AWDFSPEQLDHPFDCFKASRTNASKKQREKLLELIRRLAEDDKDGVMAHRVLNLLWNLAH 509
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 510 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 569
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 570 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLVTYME 618
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 725 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 782
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 783 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 823
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 668 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 722
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 335 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 378
>gi|227937273|gb|ACP43282.1| ubiquitin specific peptidase 9 Y-linked [Gorilla gorilla]
Length = 2555
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/611 (58%), Positives = 442/611 (72%), Gaps = 57/611 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP +LA LD I+ RWVVPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+I
Sbjct: 68 FPHTELAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTI 127
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKIL D+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 128 SFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHI 187
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + + N+ + +DE+FAR D ++ +GWLVDLIN FG + GFQIL +RF N S
Sbjct: 188 YNGTRPCELISSNAQLPEDELFARSSDP-RSPKGWLVDLINKFGILNGFQILHDRFFNGS 246
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+L+ T+ KYF+P++E
Sbjct: 247 ALNVQIIAALIKPFGQCYEFLSQHTVKKYFIPVIE------------------------- 281
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
IVP +LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 282 -----------------------IVPHLLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 318
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+R+ Q++T+K LEIFRLK+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HR E
Sbjct: 319 ASRISGQDETIKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRRSNPEE 378
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVL+DSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 379 EEWLTAERMAEWIQQNNILSIVLQDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 438
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 439 QAGKHEAIVKNVHDLLAKLAWDFSPGQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 498
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 499 DKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDAQKIQWIDHFIE 558
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L +NH+L+
Sbjct: 559 ELRTNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHIFYRHDLINQLQQNHALV 614
Query: 631 MLITNNLCSLL 641
L+ NL + +
Sbjct: 615 TLVAENLATYM 625
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN E KL+ K+RS ++D+ +LIG +YLWRV+ + ++IA RA
Sbjct: 733 LTENGMKCFERFFKAVNCRERKLI--AKRRSYMMDDLELIGLDYLWRVVIQSSDEIANRA 790
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+L+++ H+ FI C DRL+A YDT+
Sbjct: 791 IDLLKEIYTNLGPRLKANQVVIHEDFIQSCFDRLKASYDTL 831
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 676 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 730
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Query: 615 NRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP--- 671
+R S D IKN + L + LLQISSFNGKMNALNE+NKVI+ V+YY HR
Sbjct: 320 SRISGQDETIKNLEIFRL--KMILRLLQISSFNGKMNALNEINKVISSVSYYTHRRSNPE 377
Query: 672 EEEWLTPDR 680
EEEWLT +R
Sbjct: 378 EEEWLTAER 386
>gi|2580558|gb|AAC51833.1| ubiquitin specific protease 9 [Homo sapiens]
Length = 2555
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/611 (57%), Positives = 442/611 (72%), Gaps = 57/611 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP +LA LD I+ RWVVPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+I
Sbjct: 68 FPHTELANLDDMINRPRWVVPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTI 127
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKIL D+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 128 SFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHI 187
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + + N+ + +DE+FAR D ++ +GWLVDLIN FG++ GFQIL +RF N S
Sbjct: 188 YNGTRPCELISSNAQLPEDELFARSSDP-RSPKGWLVDLINKFGTLNGFQILHDRFFNGS 246
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L I +I ALI+PFGQ +E+L+ T+ KYF+P++E
Sbjct: 247 ALNIQIIAALIKPFGQCYEFLSQHTLKKYFIPVIE------------------------- 281
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP +LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 282 -----------------------MVPHLLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 318
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+R+ Q++T+K LEIFRLK+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH E
Sbjct: 319 ASRISGQDETIKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPEE 378
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVL+DSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 379 EEWLTAERMAEWIQQNNILSIVLQDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 438
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 439 QAGKHEAIVKNVHDLLAKLAWDFSPGQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 498
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LA SDDV IM+ AL++H+KILDYSC+Q+RD QK W+ IE
Sbjct: 499 DKDGVMAHKVLNLLWNLAQSDDVPVYIMDLALSAHIKILDYSCAQDRDAQKIQWIDHFIE 558
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L +NH+L+
Sbjct: 559 ELRTNDKWVIPALKQIREICSLFGEASQNLSQ----TQRSPHIFYRHDLINQLQQNHALV 614
Query: 631 MLITNNLCSLL 641
L+ NL + +
Sbjct: 615 TLVAENLATYM 625
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN E KL+ K+RS ++D+ +LIG +YLWRV+ + ++IA RA
Sbjct: 733 LTENGMKCFERFFKAVNCRERKLI--AKRRSYMMDDLELIGLDYLWRVVIQSSDEIANRA 790
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+L+++ H+ FI C DRL+A YDT+
Sbjct: 791 IDLLKEIYTNLGPRLKANQVVIHEDFIQSCFDRLKASYDTL 831
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 676 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 730
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 615 NRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP--- 671
+R S D IKN + L + LLQISSFNGKMNALNE+NKVI+ V+YY HRH
Sbjct: 320 SRISGQDETIKNLEIFRL--KMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPE 377
Query: 672 EEEWLTPDR 680
EEEWLT +R
Sbjct: 378 EEEWLTAER 386
>gi|328720470|ref|XP_003247040.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 2 [Acyrthosiphon pisum]
gi|328720472|ref|XP_001946927.2| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like isoform 1 [Acyrthosiphon pisum]
Length = 2593
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/636 (56%), Positives = 445/636 (69%), Gaps = 64/636 (10%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP+ KL L+ KI S RW+VPVLP+QEL L+ +I CK D+++E CQ+FFR+ + +
Sbjct: 91 FPIMKLINLEEKIHSQRWIVPVLPDQELLSLLNVSIAFCKKGLDINNEGCQKFFRDAMVL 150
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFT+ILTDDAV+SWK NI I NNC KL+EL+VLKL D FP L++L M+FNP NKFH
Sbjct: 151 SFTRILTDDAVNSWKVNIQQYIMNNCMKLVELLVLKLDDDNFPFLEMLGMLFNPLNKFHL 210
Query: 155 FNSNQQSISVP-VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNK 213
FN + S +P + +N D +++AR + +GWLVDL+N FG +GGFQ L RF++
Sbjct: 211 FNCTKHSDYIPEIGTN--DFDLYARTPPDSRAPKGWLVDLLNKFGVLGGFQKLSGRFESN 268
Query: 214 STLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKN 273
TLTI +I LIRPFG E LT PTILKY MPI+E +
Sbjct: 269 KTLTISIISGLIRPFGNCSELLTEPTILKYLMPIVEKI---------------------- 306
Query: 274 DAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKL 333
P +L+ LTD+ELKKE KNE KNDAIS IIK+CK
Sbjct: 307 --------------------------PSLLDVLTDDELKKETKNEGKNDAISSIIKACKQ 340
Query: 334 LAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRH--PE 391
LA ++P Q+D +KQLEIFRLK++LRLLQISSFNGKMNALNEVNKVI V Y PHRH +
Sbjct: 341 LAVKIPKQDDLIKQLEIFRLKMLLRLLQISSFNGKMNALNEVNKVITNVTYTPHRHIDHD 400
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EE+LTP++MAKWIK+NNVLEIVLRDSLHQPQYVEKLEKI+RF+IKE+ALSL DLDA+WAA
Sbjct: 401 EEYLTPEKMAKWIKENNVLEIVLRDSLHQPQYVEKLEKIIRFVIKEQALSLNDLDALWAA 460
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKHDAIVKNVH+LLAKLAWDFSP QLDHLF CF A+WT+AN+KQ EKLLELIRRLAED
Sbjct: 461 QAGKHDAIVKNVHDLLAKLAWDFSPEQLDHLFECFHANWTNANKKQREKLLELIRRLAED 520
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVL LFW+LAH +DV T+I++QAL++H+KILDYSC+Q+RD QKT WL C++
Sbjct: 521 DKDGVMAHKVLMLFWNLAHGEDVSTEIIDQALSAHVKILDYSCAQDRDAQKTAWLDKCVD 580
Query: 572 EFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIM 631
E KSN WV+P L+ ++DIC LY+ AP + RQ II L NH+L+
Sbjct: 581 ELKSNSSWVLPVLKHMRDICMLYDSSPVGAHQAPAHTLY-----RQEIIARLQNNHTLVS 635
Query: 632 LITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYP 667
L+T+NL S + + + + N + YYP
Sbjct: 636 LVTDNL------SKYMDDVRKVAQENHNLDPANYYP 665
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/103 (60%), Positives = 85/103 (82%), Gaps = 2/103 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN+ EGKL+ K+R ++N DLIG +YLW+V+TN EDIA A
Sbjct: 753 LTENGIKCFERFFKAVNVKEGKLL--KKRRCYHMENIDLIGVDYLWKVVTNCTEDIAAHA 810
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGL 784
I LLKEV+T+L P+LQ++ +FH+TF+AECL+RLRAHYDT+ +
Sbjct: 811 IHLLKEVNTNLAPRLQANPLEFHQTFVAECLERLRAHYDTVSI 853
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 41/54 (75%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A Q+W ALA++A+F DREACF+WFSKLM +EPD+DP + FF ++L +P
Sbjct: 697 QAHQVWIALAEKAVFLADREACFRWFSKLMGEEPDIDPSINTKFFINNLLQLDP 750
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 37/46 (80%), Gaps = 2/46 (4%)
Query: 637 LCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRH--PEEEWLTPDR 680
L LLQISSFNGKMNALNEVNKVI V Y PHRH +EE+LTP++
Sbjct: 363 LLRLLQISSFNGKMNALNEVNKVITNVTYTPHRHIDHDEEYLTPEK 408
>gi|405953280|gb|EKC20973.1| Putative ubiquitin carboxyl-terminal hydrolase FAF-X [Crassostrea
gigas]
Length = 1763
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/612 (57%), Positives = 437/612 (71%), Gaps = 59/612 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP+ +L LD I+ RWVVPVLP ELE L++AAI+LCK D SEPCQRFFREGL++
Sbjct: 84 FPMVELGRLDEMINRPRWVVPVLPNGELEVLLEAAIKLCKEGLDTKSEPCQRFFREGLTV 143
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKI+TD+AV WKY IH CI N +K++EL+V KL QD FPLL++L MV NP KFH
Sbjct: 144 SFTKIMTDEAVSGWKYEIHRCILKNAEKMIELVVAKLSQDWFPLLELLAMVLNPHCKFHI 203
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N ++ S S+ + +E+FARP D +N +GWLVDL+N FG +GGFQIL ERF++
Sbjct: 204 YNGSRTSESIQAGTE-NSEELFARPPDP-RNPKGWLVDLVNHFGKLGGFQILQERFKS-G 260
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L++PV+ ALI+PFGQ E LT T+ +YF+PI++I
Sbjct: 261 QLSVPVVAALIKPFGQCAEVLTPQTVEQYFLPIVDI------------------------ 296
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
VP+ L LTDEELKKE+KNE+KNDA+S IIK K L
Sbjct: 297 ------------------------VPKFLNELTDEELKKESKNEAKNDALSSIIKGLKQL 332
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
++P+QEDT+K LE FRLK+ILRLLQISSFNGKMNALNEVNKVI+ V++ RH E
Sbjct: 333 VNKLPNQEDTIKTLEGFRLKMILRLLQISSFNGKMNALNEVNKVISNVSFQSSRHSQMEE 392
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
+EWLT D+MA+WI+ N VL IVLRDSLHQPQYVEKLEKILRF+IKEKAL+ DLD +W A
Sbjct: 393 DEWLTADKMAEWIQKNGVLTIVLRDSLHQPQYVEKLEKILRFMIKEKALTSDDLDKLWEA 452
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
Q+GKHDAIVKNVH+LLAKLAWDFSP QLDHLF CFQ SWT A++KQ EKLLELIRRLAED
Sbjct: 453 QSGKHDAIVKNVHDLLAKLAWDFSPEQLDHLFECFQVSWTHASKKQREKLLELIRRLAED 512
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DK+GVMA KVL L W+LAHS+DV T+IM+QAL +H+KILDYSCSQ+RD QK W+ +E
Sbjct: 513 DKEGVMAHKVLGLLWNLAHSEDVPTEIMDQALTAHIKILDYSCSQDRDAQKMTWITKFVE 572
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E K N KWV+PAL+QI++IC L+ E QN HAP R+ R ++I L NHS++
Sbjct: 573 ELK-NDKWVLPALKQIREICQLFPESPQNF-PHAP--QRASHVYYRNTVIAQLQSNHSIV 628
Query: 631 MLITNNLCSLLQ 642
ML+ NL + ++
Sbjct: 629 MLVATNLSNYMK 640
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+ CFE+FFK VN E K++ K ++ L+D+ +LIG +YLWRV+ + +++A +A
Sbjct: 747 LTENGMNCFERFFKHVNQKENKIIAK-RRGGHLMDDLELIGMDYLWRVVLLSPDEVANKA 805
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
I LLK++ T+LGP+LQ + + H FI C+DRLRA YDT+
Sbjct: 806 IILLKDIYTNLGPRLQQNQVEIHDDFIQSCVDRLRALYDTV 846
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 45/54 (83%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+ARQIW LA+ AI+ DRE+CFKWF+KLM +EPDLDP++ KDFFE+++L +P
Sbjct: 691 QARQIWQCLAESAIYSSDRESCFKWFAKLMGEEPDLDPEITKDFFEQNILQLDP 744
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 35/44 (79%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V++ RH E+EWLT D+
Sbjct: 357 LLQISSFNGKMNALNEVNKVISNVSFQSSRHSQMEEDEWLTADK 400
>gi|443732937|gb|ELU17500.1| hypothetical protein CAPTEDRAFT_183046 [Capitella teleta]
Length = 2504
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/643 (55%), Positives = 440/643 (68%), Gaps = 78/643 (12%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP +LA LD I+ RWVVPVLP ELE L+ AAI LCK N D +E CQRFFR+GL+I
Sbjct: 11 FPHAELAKLDEMINRPRWVVPVLPHGELEVLLDAAINLCKKNLDTRTEACQRFFRDGLTI 70
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTD+AV+ WKY IH CI+ N KL+EL V+KL D FPLLD+L MV NP +KFH+
Sbjct: 71 SFTKILTDEAVNGWKYEIHRCIFTNAMKLIELCVVKLPHDWFPLLDLLAMVLNPASKFHS 130
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N N+ S S D+EI+A+ D + +GWLVDL+N FG +GGFQILL+RF + +
Sbjct: 131 YNGNRPSEPPAQGSQTTDEEIYAKSPDA-RVPKGWLVDLVNKFGKLGGFQILLDRFTSGA 189
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L++PVI AL+RPFG +E LT + KY MPI+E
Sbjct: 190 NLSVPVIAALVRPFGLCYEVLTPNVVSKYLMPIVEQ------------------------ 225
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
VP++LE LTD+ELKKE+K+E+KNDA+S IIK+ K L
Sbjct: 226 ------------------------VPKLLEKLTDDELKKESKSEAKNDALSGIIKALKCL 261
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+R+P QE+T+K LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI V+YY HRH E
Sbjct: 262 ASRLPKQEETIKGLEIFRLKMILRLLQISSFNGKMNALNEVNKVITNVSYYTHRHSQLEE 321
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
+EWLT ++MA+WI+ NNVL IVLRDSLHQPQYVEKLEKI+RF+IKEKAL+ DL+ +W A
Sbjct: 322 DEWLTAEKMAEWIQQNNVLSIVLRDSLHQPQYVEKLEKIIRFMIKEKALTRNDLNMIWEA 381
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFS QLDHLF CFQ SW +A++KQ EKLLELIRRLAED
Sbjct: 382 QAGKHEAIVKNVHDLLAKLAWDFSHDQLDHLFECFQKSWANASKKQREKLLELIRRLAED 441
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQE-RDKQKTIWLQTCI 570
DK+GVMA KVL L W+LAHS+DV TDIM+QAL +H+KILDYSCSQ+ RD QK W+ +
Sbjct: 442 DKEGVMAQKVLGLLWNLAHSEDVPTDIMDQALTAHIKILDYSCSQQDRDAQKIHWINRFV 501
Query: 571 EEFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSL 629
EE K N KWV+PAL+QIK+IC L+ E QN S R R ++I+ L +S+
Sbjct: 502 EELK-NDKWVLPALKQIKEICSLFTEAPQNFTH----SQRQPHMFYRNTVINQLQNQNSI 556
Query: 630 IMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPE 672
+ L+ NL N MN + Y H HP+
Sbjct: 557 VTLVAQNL---------NAYMNNARK----------YSHEHPD 580
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 78/102 (76%), Gaps = 1/102 (0%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+ CFE+FFKSVN EGKL+ K ++ ++D+ DLIG +YLWRV+ + ED+A +A
Sbjct: 676 LTENGMNCFERFFKSVNNKEGKLIAK-RRGGHMMDDLDLIGLDYLWRVVLFSPEDVADKA 734
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIG 783
I LLK++ T+LGP+LQS+ + H+ F+ C+DRL+A YDTI
Sbjct: 735 IVLLKDIYTNLGPRLQSNQVEIHEDFLQYCMDRLKAAYDTIS 776
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 46/55 (83%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+ IWT LA+ AI+ CDRE CFKWFSKLM +EPDLDP++ KDFFE ++L F+P
Sbjct: 619 PQAKPIWTCLAENAIYPCDRENCFKWFSKLMGEEPDLDPEITKDFFEANILQFDP 673
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 36/44 (81%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI V+YY HRH E+EWLT ++
Sbjct: 286 LLQISSFNGKMNALNEVNKVITNVSYYTHRHSQLEEDEWLTAEK 329
>gi|194378380|dbj|BAG57940.1| unnamed protein product [Homo sapiens]
Length = 577
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/591 (59%), Positives = 421/591 (71%), Gaps = 60/591 (10%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRH---PEEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVV 581
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVM 567
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH---PEEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|390333473|ref|XP_003723719.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
[Strongylocentrotus purpuratus]
Length = 2695
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/622 (55%), Positives = 439/622 (70%), Gaps = 59/622 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP E L LD I+ RWV+PVLP+ ELE L++AAIEL K N D+ SE CQRFFR+GL+I
Sbjct: 59 FPAESLNRLDEMINKPRWVIPVLPKGELEVLLEAAIELSKKNLDIRSESCQRFFRDGLTI 118
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTD+AV WK+ IH CI N +KL+EL V KL QD FPLL++L M NP KFH
Sbjct: 119 SFTKILTDEAVSGWKFEIHRCIMKNTEKLIELCVSKLSQDWFPLLELLAMALNPLCKFHV 178
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
FN ++QS +VP+ S + +++IFARP D +N +GWLVDL+N FG++GGF IL ERF ++S
Sbjct: 179 FNGSRQSETVPMGSQLNNNDIFARPPDI-RNPKGWLVDLLNRFGALGGFDILQERFLDES 237
Query: 215 -TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKN 273
+L +P+I AL+RP+GQ +E +T T+ +FMPI++ V L+
Sbjct: 238 QSLNVPIIHALLRPWGQCYELITQHTVQTHFMPIVDRVVAYLDG---------------- 281
Query: 274 DAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKL 333
L+D+ELKKE+KNE++NDA+S IIK+ +
Sbjct: 282 --------------------------------LSDDELKKESKNEARNDALSSIIKALRN 309
Query: 334 LAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP--- 390
L ++VP+QE+ +K LE+FRLK+ILRLLQISSFNGKMNALNEVNKVIA V YY H+
Sbjct: 310 LVSKVPNQEEKIKNLEMFRLKMILRLLQISSFNGKMNALNEVNKVIANVTYYTHKQTGVD 369
Query: 391 EEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWA 450
EEE+LT +RMA+WI++N VL IVLRDSLHQPQYVEKLEKILRF+IKEKAL++ DLD +WA
Sbjct: 370 EEEYLTAERMAEWIQENKVLSIVLRDSLHQPQYVEKLEKILRFVIKEKALTMEDLDNIWA 429
Query: 451 AQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAE 510
AQ GKH+AIVKNVH+LLAKLAWDFSP QLDHLF CFQ SW +A+ KQ EKLLELIRRLAE
Sbjct: 430 AQVGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFQESWATASTKQREKLLELIRRLAE 489
Query: 511 DDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCI 570
DDKDG+MA KVL+L W+LAH DV TDIM+QAL +H KILDYSCSQ+RD QK W+ +
Sbjct: 490 DDKDGLMAHKVLSLLWTLAHQQDVPTDIMDQALHAHTKILDYSCSQDRDSQKLHWIDKFV 549
Query: 571 EEFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSL 629
EE + + WV+PAL+QIK+IC L+ E QN P + RS R +I+ L HSL
Sbjct: 550 EELRKD-NWVIPALKQIKEICSLFAEAPQNY----PTAQRSSHVQYRHDVINSLQTKHSL 604
Query: 630 IMLITNNLCSLLQISSFNGKMN 651
+ L+ NL S + + + K N
Sbjct: 605 VTLVAENLSSYMNHARQSAKEN 626
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 83/106 (78%), Gaps = 2/106 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCF++FFK+VN EGKLV K+R+ L+D+ +LIG +YLWRV+ +G++IA +A
Sbjct: 722 LTENGIKCFDRFFKAVNSKEGKLV--PKRRAFLMDDLELIGLDYLWRVVLCSGDEIALKA 779
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHT 787
I+LLKE T+LGPKLQ+S + H+ FI C+DRL+A YDT+ + T
Sbjct: 780 IELLKETYTNLGPKLQASQSDIHEDFIQSCMDRLKAMYDTLRILET 825
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A++IW LA+ +++ DREACFKWFSKLM +EPDLDP++ +DFFE ++L +P
Sbjct: 665 PQAKEIWHCLAENSVYVSDREACFKWFSKLMGEEPDLDPEINRDFFEDNILQLDP 719
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
Query: 624 IKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
IKN L M + LLQISSFNGKMNALNEVNKVIA V YY H+ EEE+LT +R
Sbjct: 321 IKN--LEMFRLKMILRLLQISSFNGKMNALNEVNKVIANVTYYTHKQTGVDEEEYLTAER 378
>gi|120300980|ref|NP_683745.2| ubiquitin specific peptidase 9, Y chromosome [Mus musculus]
gi|225000562|gb|AAI72601.1| Ubiquitin specific peptidase 9, Y chromosome [synthetic construct]
Length = 2556
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/613 (56%), Positives = 433/613 (70%), Gaps = 62/613 (10%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA L+ I+ SRWVVPVLP+ ELE L++A+I+L K DV SE CQRFFR+ L++
Sbjct: 67 FPHTDLAKLEDMINRSRWVVPVLPKGELEVLLEASIDLTKKGLDVKSEACQRFFRDVLTV 126
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF+KIL D+AV WK+ IH CI NN +L+EL V KL QD FP L++L + NP KFH
Sbjct: 127 SFSKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPFLELLAIALNPHCKFHV 186
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + SV + +DE+FA D + + +GWLVDLIN FG++ GFQIL +RF + S
Sbjct: 187 YNGARPCESVSSSVQFPEDELFACSPDLH-SPKGWLVDLINTFGTLNGFQILHDRFTSGS 245
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + I ALI+PFGQ +E+LT T+ KYF+P++E
Sbjct: 246 ALNVQTIAALIKPFGQCYEFLTQHTLRKYFIPVIE------------------------- 280
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP+IL+ LT+EELKKE K E KND IS+IIK K L
Sbjct: 281 -----------------------VVPQILQKLTNEELKKETKTEVKNDTISMIIKFLKNL 317
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRH--PEE 392
A+R+P QE+TVK LE FRLK+ILRLLQISSFNGKMNALNE+NKV++ V+YY H H EE
Sbjct: 318 ASRIPGQEETVKNLETFRLKMILRLLQISSFNGKMNALNEINKVLSSVSYYTHGHGNSEE 377
Query: 393 EWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQ 452
EWLT +RM +WI+ NN+L IVL+DSLHQPQYVEK+EKILRF+IKEKAL+L DL+ +WAAQ
Sbjct: 378 EWLTVERMTEWIQQNNILSIVLQDSLHQPQYVEKIEKILRFVIKEKALTLQDLNNIWAAQ 437
Query: 453 AGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDD 512
AGKH+AIVKNVH+LLAKLAW+FSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDD
Sbjct: 438 AGKHEAIVKNVHDLLAKLAWNFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDD 497
Query: 513 KDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEE 572
KDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE
Sbjct: 498 KDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDCFIEE 557
Query: 573 FKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNN---RQSIIDILIKNHS 628
F++N KWV+PAL+QIK+IC L+ E QNL S++H S R +I L NH+
Sbjct: 558 FRTNNKWVIPALKQIKEICSLFGEAPQNL-------SQTHQSPRVFYRHDLISQLQHNHA 610
Query: 629 LIMLITNNLCSLL 641
L+ L+ NL + +
Sbjct: 611 LVTLVAENLAAYM 623
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 88/126 (69%), Gaps = 8/126 (6%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKL+ +K++ ++D+ DLIG +YLW+V+ + +DI+ RA
Sbjct: 731 LTENGMKCFERFFKTVNCREGKLM--IKRKIYMMDDLDLIGLDYLWKVVIQSNDDISSRA 788
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTA 801
IDLLKE+ T LGPKLQ++ H+ FI C DRL+A YDT+ + + E I++
Sbjct: 789 IDLLKEIYTSLGPKLQANQVVIHEDFIQSCFDRLKASYDTLCVLDS------EKDNIFSC 842
Query: 802 LAQEAI 807
QEAI
Sbjct: 843 ARQEAI 848
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A+QIW LA+ A++ DREACF W+SKLM DEPDL P + K+FFE +VL +P
Sbjct: 675 QAKQIWNCLAENAVYFSDREACFMWYSKLMGDEPDLHPDINKEFFESNVLQLDP 728
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%), Gaps = 2/43 (4%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH--PEEEWLTPDR 680
LLQISSFNGKMNALNE+NKV++ V+YY H H EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEINKVLSSVSYYTHGHGNSEEEWLTVER 384
>gi|194764889|ref|XP_001964560.1| GF22987 [Drosophila ananassae]
gi|190614832|gb|EDV30356.1| GF22987 [Drosophila ananassae]
Length = 2782
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/646 (53%), Positives = 441/646 (68%), Gaps = 96/646 (14%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL +L KIS+ RWVVPVLPEQELE L+ AAIEL + D + EPC F+R GL+
Sbjct: 119 FPTTKLRMLTQKISNPRWVVPVLPEQELEVLLNAAIELTQAGVDHNCEPCVEFYRNGLTT 178
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWKYNIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+T
Sbjct: 179 SFAKILTDEAVNSWKYNIHHCILVSCGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNT 238
Query: 155 FNSNQQSISV--------PVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQIL 206
FN+ + + P++SN ++FA+P KN RGWLVDLIN FG +GGF L
Sbjct: 239 FNAARHPVCFATPDAIWGPLDSN----KMFAKPPPEPKNARGWLVDLINRFGQLGGFDNL 294
Query: 207 LERF----------QNKST-----------LTIPVIFALIRPFGQVHEYLTLPTILKYFM 245
LERF QNK T LT+ +I +L+RPFGQ +E LT TI KYFM
Sbjct: 295 LERFNSGLELLKRNQNKPTAKEASDGQDNRLTLALIHSLLRPFGQCYELLTPATIAKYFM 354
Query: 246 PILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILEN 305
P + V ++L++
Sbjct: 355 PTWNV------------------------------------------------VLDLLDS 366
Query: 306 LTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSF 365
TDEELK+E K E +ND I+ I+KS + LA+R+ QE+ ++ LE+FRLK+ILRLLQ+SSF
Sbjct: 367 FTDEELKREVKPEGRNDYINGIVKSARFLASRLTGQEELIRDLEMFRLKMILRLLQVSSF 426
Query: 366 NGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVLEIVLRD 416
NGKMNALNE+NKV++ VAYY HR PE+E WLT +RMA+WIK ++VL IVL+D
Sbjct: 427 NGKMNALNEINKVLSSVAYYSHRSQPLPHCMPEDEMDWLTAERMAQWIKSSDVLGIVLKD 486
Query: 417 SLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSP 476
SLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWDF+P
Sbjct: 487 SLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWDFTP 546
Query: 477 VQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMT 536
QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +V
Sbjct: 547 EQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQEVPP 606
Query: 537 DIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYEP 596
++++QAL +H+KILDYSCSQERD QKTIWL C+ E KS WV+PALR I+DICCLY+
Sbjct: 607 EVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVGELKSGDSWVLPALRLIRDICCLYDT 666
Query: 597 GQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
N HAP R+ + NRQ +I+ L +++L++L+TN+L + ++
Sbjct: 667 TPN---HAP---RTQTGTNRQQVIERLQNDYTLVILVTNSLTAYME 706
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GEDIA +A
Sbjct: 813 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYILDNEDLIGKDYLWRVITTGGEDIAGKA 870
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST L P+LQ ++ +FH+ FI EC RLR HY I
Sbjct: 871 IDLLKEVSTALSPRLQENVAEFHEMFIGECCSRLRNHYGNI 911
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 757 QAKQIWHCLAVSAVFPADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 814
Query: 854 LSGL 857
SG+
Sbjct: 815 ESGI 818
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAYY HR PE+E WLT +R Q +S
Sbjct: 420 LLQVSSFNGKMNALNEINKVLSSVAYYSHRSQPLPHCMPEDEMDWLTAERMAQWIKSSDV 479
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 480 LGIVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 534
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 535 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 576
>gi|195452542|ref|XP_002073399.1| GK13174 [Drosophila willistoni]
gi|194169484|gb|EDW84385.1| GK13174 [Drosophila willistoni]
Length = 2766
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/714 (50%), Positives = 464/714 (64%), Gaps = 103/714 (14%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGP-GCTCKFPVEKLAILDSKISSSRWVVPVLPEQ 60
P G S + + SSS T+ P FP KL L KIS+ RWVVPVLPEQ
Sbjct: 71 PATPAGDSLEGPATTSSSLDSTVTTVSPEKLISSFPTTKLRSLTQKISNPRWVVPVLPEQ 130
Query: 61 ELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNC 120
ELE L+ AAIEL + D D EPC F+R GLS SF KILTD+AV+SWKYNIH+CI +C
Sbjct: 131 ELEVLLNAAIELTQAGVDHDCEPCVEFYRNGLSTSFAKILTDEAVNSWKYNIHHCILVSC 190
Query: 121 QKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQ--SISVP--VNSNIADDEIF 176
KLL LI + + +D LLD+L +VF+P NKF+TFN+ +Q + P + + +++F
Sbjct: 191 GKLLHLIAIHMQRDNPYLLDLLAIVFDPDNKFNTFNAARQPECFAAPDCIWGVLDSNKMF 250
Query: 177 ARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF----------QNK------------- 213
ARP KN RGWLVDLIN FG +GGF LLERF QN+
Sbjct: 251 ARPPPEPKNARGWLVDLINRFGQLGGFDNLLERFNSGLEILKRNQNQKKGSGKSAASDSS 310
Query: 214 --------STLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKK 265
+ LT+ +I +L+RPFGQ HE LT TI KYFMP +
Sbjct: 311 SGDGTAQDNRLTLALIHSLLRPFGQCHELLTPATIAKYFMPTWNV--------------- 355
Query: 266 EAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAIS 325
V ++L++ TDEELK+E K E +ND I+
Sbjct: 356 ---------------------------------VLDLLDSFTDEELKREVKPEGRNDYIN 382
Query: 326 VIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYY 385
I+KS + LA+R+ QE+ ++ LE+FRLK+ILRLLQ+SSFNGKMNALNE+NKV++ VAYY
Sbjct: 383 GIVKSARSLASRLTGQEELIRDLEMFRLKMILRLLQVSSFNGKMNALNEINKVLSSVAYY 442
Query: 386 PHRH-------PEE---EWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLI 435
HR P+E +WLT +RMA+WIK ++VL IVL+DSLHQPQYVEKLEKI+RFLI
Sbjct: 443 SHRSQPLPHCMPDEMEMDWLTAERMAQWIKSSDVLGIVLKDSLHQPQYVEKLEKIIRFLI 502
Query: 436 KEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANR 495
KE+AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWDF+P QLDHLF FQAS T+AN+
Sbjct: 503 KEQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWDFTPEQLDHLFEAFQASMTTANK 562
Query: 496 KQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCS 555
+Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +V ++++QA+ +H+KILDYSCS
Sbjct: 563 RQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQEVPPEVLDQAIGAHVKILDYSCS 622
Query: 556 QERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNN 615
QERD QKTIWL C+ E K+ WV+PALR I+DICCLY+ SHAP R+ +S N
Sbjct: 623 QERDAQKTIWLDKCVGELKAGDSWVLPALRLIRDICCLYDTSP---SHAP---RTQTSTN 676
Query: 616 RQSIIDILIKNHSLIMLITNNLCSLL-QISSFNGKMNALNEVNKVIAGVAYYPH 668
RQ +I+ L ++SL++L+TN+L + + +I + +L+ + +I G +PH
Sbjct: 677 RQQVIERLQNDYSLVILVTNSLTAYMDKIRHMVSETPSLDPASILIDG--RFPH 728
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 810 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYMLDNEDLIGKDYLWRVITTGGEEIANKA 867
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+LQ ++ +FH+ FI EC RLR HY I
Sbjct: 868 IDLLKEVSTALGPRLQENIAEFHEMFIGECCSRLRTHYGNI 908
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 754 QAKQIWHCLAVNAVFPSDREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 811
Query: 854 LSGL 857
SG+
Sbjct: 812 ESGI 815
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 31/163 (19%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEE---EWLTPDR--QLTES-- 685
LLQ+SSFNGKMNALNE+NKV++ VAYY HR P+E +WLT +R Q +S
Sbjct: 416 LLQVSSFNGKMNALNEINKVLSSVAYYSHRSQPLPHCMPDEMEMDWLTAERMAQWIKSSD 475
Query: 686 --GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNA 733
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 476 VLGIVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNV 530
Query: 734 GEDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 531 HDLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 573
>gi|194904689|ref|XP_001981044.1| GG11832 [Drosophila erecta]
gi|190655682|gb|EDV52914.1| GG11832 [Drosophila erecta]
Length = 2775
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/684 (51%), Positives = 450/684 (65%), Gaps = 99/684 (14%)
Query: 4 PQPGTSSDKDISQSSSHRKEGTSCG----PGCTCKFPVEKLAILDSKISSSRWVVPVLPE 59
P G+ S D++ S S ++ FP KL L KIS+ RWVVPVLPE
Sbjct: 72 PATGSQSSDDVAASLSANSVDSTITLVPPEKLISSFPTTKLRSLTQKISNPRWVVPVLPE 131
Query: 60 QELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNN 119
QELE L+ AAIEL + D D EPC F+R GLS SF KILTD+AV+SWK NIH+CI +
Sbjct: 132 QELEVLLNAAIELTQAGVDHDCEPCVEFYRNGLSTSFAKILTDEAVNSWKNNIHHCILVS 191
Query: 120 CQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQ--SISVP--VNSNIADDEI 175
C KLL LI + + +D LLD+L +VF+P NKF+TFN+ +Q + P + + +++
Sbjct: 192 CGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNTFNAARQPECFAAPDYIWGQLDSNKM 251
Query: 176 FARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF----------QNKST---------- 215
+ARP KN RGWLVDLIN FG +GGF LLERF QNK T
Sbjct: 252 YARPPAEPKNARGWLVDLINRFGQLGGFDNLLERFNSGLELLKRNQNKCTGKNVGVEGSV 311
Query: 216 --------LTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEA 267
LT+ +I +L+RPFGQ +E LT TI KYFMP +
Sbjct: 312 ENGGQDNRLTLALIHSLLRPFGQCYELLTPATISKYFMPTWNV----------------- 354
Query: 268 KNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVI 327
V ++L++ TDEELK+E K E +ND I+ I
Sbjct: 355 -------------------------------VLDLLDSFTDEELKREVKPEGRNDYINGI 383
Query: 328 IKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPH 387
+KS + LA+R+ QE+ ++ LE+FRLK+ILRLLQ+SSFNGKMNALNE+NKV++ VAYY H
Sbjct: 384 VKSARFLASRLSGQEELIRDLEMFRLKMILRLLQVSSFNGKMNALNEINKVLSSVAYYSH 443
Query: 388 RH-------PEEE--WLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEK 438
R PE+E WLT +RMA+WIK ++VL IVL+DSLHQPQYVEKLEKI+RFLIKE+
Sbjct: 444 RSQPLPHCMPEDEMDWLTAERMAQWIKSSDVLGIVLKDSLHQPQYVEKLEKIIRFLIKEQ 503
Query: 439 ALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQT 498
AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWDF+P QLDHLF FQAS T+AN++Q
Sbjct: 504 ALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQR 563
Query: 499 EKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQER 558
E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +V ++++QAL +H+KILDYSCSQER
Sbjct: 564 ERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQEVPPEVLDQALGAHVKILDYSCSQER 623
Query: 559 DKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQS 618
D QKTIWL C+ E KS WV+PALR I+DICCLY+ N HAP R+ + NRQ
Sbjct: 624 DAQKTIWLDKCVGELKSGDAWVLPALRLIRDICCLYDTTPN---HAP---RTQTGTNRQQ 677
Query: 619 IIDILIKNHSLIMLITNNLCSLLQ 642
+I+ L ++SL++L+TN+L + ++
Sbjct: 678 VIERLQNDYSLVILVTNSLTAYME 701
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 808 LTESGIKCFERFFKAVNSKEDKL--KAIHGGYILDNEDLIGKDYLWRVITTGGEEIASKA 865
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+LQ ++ +FH+ FI EC RLR HY+ I
Sbjct: 866 IDLLKEVSTALGPRLQENIAEFHEMFIGECCSRLRTHYENI 906
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 752 QAKQIWHCLAVNAVFPADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 809
Query: 854 LSGL 857
SG+
Sbjct: 810 ESGI 813
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAYY HR PE+E WLT +R Q +S
Sbjct: 415 LLQVSSFNGKMNALNEINKVLSSVAYYSHRSQPLPHCMPEDEMDWLTAERMAQWIKSSDV 474
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 475 LGIVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 529
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 530 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 571
>gi|195505547|ref|XP_002099552.1| GE10966 [Drosophila yakuba]
gi|194185653|gb|EDW99264.1| GE10966 [Drosophila yakuba]
Length = 2760
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/684 (51%), Positives = 450/684 (65%), Gaps = 99/684 (14%)
Query: 4 PQPGTSSDKDISQSSSHRKEGTSCG----PGCTCKFPVEKLAILDSKISSSRWVVPVLPE 59
P G+ S D++ S S ++ FP KL L KIS+ RWVVPVLPE
Sbjct: 68 PATGSQSSDDVAASLSANTVDSTITIVPPEKLISSFPTTKLRSLTQKISNPRWVVPVLPE 127
Query: 60 QELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNN 119
QELE L+ AAIEL + D D EPC F+R GLS SF KILTD+AV+SWK NIH+CI +
Sbjct: 128 QELEVLLNAAIELTQAGVDHDCEPCVEFYRNGLSTSFAKILTDEAVNSWKNNIHHCILVS 187
Query: 120 CQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQ--SISVP--VNSNIADDEI 175
C KLL LI + + +D LLD+L +VF+P NKF+TFN+ +Q + P + + +++
Sbjct: 188 CGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNTFNAARQPECFAAPDCIWGQLDSNKM 247
Query: 176 FARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF----------QNKST---------- 215
+ARP KN RGWLVDLIN FG +GGF LLERF QNK T
Sbjct: 248 YARPPAEPKNARGWLVDLINRFGQLGGFDNLLERFNSGLELLKRNQNKCTGKNVGVEGSV 307
Query: 216 --------LTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEA 267
LT+ +I +L+RPFGQ +E LT TI KYFMP +
Sbjct: 308 ENGAQDNRLTLALIHSLLRPFGQCYELLTPATIAKYFMPTWNV----------------- 350
Query: 268 KNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVI 327
V ++L++ TDEELK+E K E +ND I+ I
Sbjct: 351 -------------------------------VLDLLDSFTDEELKREVKPEGRNDYINGI 379
Query: 328 IKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPH 387
+KS + LA+R+ QE+ ++ LE+FRLK+ILRLLQ+SSFNGKMNALNE+NKV++ VAYY H
Sbjct: 380 VKSARFLASRLSGQEELIRDLEMFRLKMILRLLQVSSFNGKMNALNEINKVLSSVAYYSH 439
Query: 388 RH-------PEEE--WLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEK 438
R PE+E WLT +RMA+WIK ++VL IVL+DSLHQPQYVEKLEKI+RFLIKE+
Sbjct: 440 RSQPLPHCMPEDEMDWLTAERMAQWIKSSDVLGIVLKDSLHQPQYVEKLEKIIRFLIKEQ 499
Query: 439 ALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQT 498
AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWDF+P QLDHLF FQAS T+AN++Q
Sbjct: 500 ALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQR 559
Query: 499 EKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQER 558
E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +V ++++QAL +H+KILDYSCSQER
Sbjct: 560 ERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQEVPPEVLDQALGAHVKILDYSCSQER 619
Query: 559 DKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQS 618
D QKTIWL C+ E KS WV+PALR I+DICCLY+ N HAP R+ + NRQ
Sbjct: 620 DAQKTIWLDKCVGELKSGDGWVLPALRLIRDICCLYDTTPN---HAP---RTQTGTNRQQ 673
Query: 619 IIDILIKNHSLIMLITNNLCSLLQ 642
+I+ L ++SL++L+TN+L + ++
Sbjct: 674 VIERLQNDYSLVILVTNSLTAYME 697
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 804 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYILDNEDLIGKDYLWRVITTGGEEIASKA 861
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDL KEVST LGP+LQ ++ +FH+ FI EC RLR HY I
Sbjct: 862 IDLFKEVSTALGPRLQENIAEFHEMFIGECCSRLRTHYGNI 902
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 748 QAKQIWHCLAVNAVFPADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 805
Query: 854 LSGL 857
SG+
Sbjct: 806 ESGI 809
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAYY HR PE+E WLT +R Q +S
Sbjct: 411 LLQVSSFNGKMNALNEINKVLSSVAYYSHRSQPLPHCMPEDEMDWLTAERMAQWIKSSDV 470
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 471 LGIVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 525
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 526 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 567
>gi|14041782|emb|CAC38831.1| putative ubiquitin-specific protease [Mus musculus]
Length = 2556
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/613 (55%), Positives = 429/613 (69%), Gaps = 62/613 (10%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP A L+ I+ SRWVVPVLP+ ELE L++ +I+L K DV SE CQRFFR+ L++
Sbjct: 67 FPHTDPAKLEDMINRSRWVVPVLPKGELEVLLETSIDLTKKGLDVKSEACQRFFRDVLTV 126
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF+KIL D+AV WK+ IH CI NN +L+EL V KL QD FP L++L + NP KFH
Sbjct: 127 SFSKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPFLELLAIALNPHCKFHV 186
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + SV + +DE+FA D + + +GWLVDLIN FG++ GFQIL +RF + S
Sbjct: 187 YNGARPCESVSSSVQFPEDELFACSPDLH-SPKGWLVDLINTFGTLNGFQILHDRFTSGS 245
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + I A I+PFGQ +E+LT T+ KYF+P++E
Sbjct: 246 ALNVQTIAAPIKPFGQCYEFLTQHTLRKYFIPVIE------------------------- 280
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
+VP+IL+ LT+EELKKE K E KND IS+IIK K L
Sbjct: 281 -----------------------VVPQILQKLTNEELKKETKTEVKNDTISMIIKFLKNL 317
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRH--PEE 392
A+R+P QE+TVK LE FRLK+ILRLLQISSFNGKMNALNE+NKV++ V+YY H H E
Sbjct: 318 ASRIPGQEETVKNLETFRLKMILRLLQISSFNGKMNALNEINKVLSSVSYYTHGHGNSEG 377
Query: 393 EWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQ 452
EWLT +RM +WI+ NN+L IVL+DSLHQPQYVEK+EKILRF+IKEKAL+L DL+ +WAAQ
Sbjct: 378 EWLTVERMTEWIQQNNILSIVLQDSLHQPQYVEKIEKILRFVIKEKALTLQDLNNIWAAQ 437
Query: 453 AGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDD 512
AGKH+AIVKNVH+LLAKLAW+FSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDD
Sbjct: 438 AGKHEAIVKNVHDLLAKLAWNFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDD 497
Query: 513 KDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEE 572
KDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE
Sbjct: 498 KDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDCFIEE 557
Query: 573 FKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNN---RQSIIDILIKNHS 628
F++N KWV+PAL+QIK+IC L+ E QNL S++H S R +I L NH+
Sbjct: 558 FRTNNKWVIPALKQIKEICSLFGEAPQNL-------SQTHQSPRVFYRHDLISQLQHNHA 610
Query: 629 LIMLITNNLCSLL 641
L+ L+ NL + +
Sbjct: 611 LVTLVAENLAAYM 623
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 88/126 (69%), Gaps = 8/126 (6%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKL+ +K++ ++D+ DLIG +YLW+V+ + +DI+ RA
Sbjct: 731 LTENGMKCFERFFKTVNCREGKLM--IKRKIYMMDDLDLIGLDYLWKVVIQSNDDISSRA 788
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTA 801
IDLLKE+ T LGPKLQ++ H+ FI C DRL+A YDT+ + + E I++
Sbjct: 789 IDLLKEIYTSLGPKLQANQVVIHEDFIQSCFDRLKASYDTLCVLDS------EKDNIFSC 842
Query: 802 LAQEAI 807
QEAI
Sbjct: 843 ARQEAI 848
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A+QIW LA+ A++ DREACF W+SKLM DEPDL P + K+FFE +VL +P
Sbjct: 675 QAKQIWNCLAENAVYFSDREACFMWYSKLMGDEPDLHPDINKEFFESNVLQLDP 728
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 2/43 (4%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH--PEEEWLTPDR 680
LLQISSFNGKMNALNE+NKV++ V+YY H H E EWLT +R
Sbjct: 342 LLQISSFNGKMNALNEINKVLSSVSYYTHGHGNSEGEWLTVER 384
>gi|6013477|gb|AAF01348.1| fat facets long isoform [Drosophila melanogaster]
Length = 2747
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/649 (53%), Positives = 440/649 (67%), Gaps = 95/649 (14%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL + D D EPC F+R GLS
Sbjct: 107 FPTTKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELTQAGVDHDCEPCVEFYRNGLST 166
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWK NIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+T
Sbjct: 167 SFAKILTDEAVNSWKNNIHHCILVSCGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNT 226
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + P + + ++++ARP KN RGWLVDLIN FG +GGF LLERF
Sbjct: 227 FNAGRQPDCFAAPDYIWGQLDSNKMYARPPPEPKNARGWLVDLINRFGQLGGFDNLLERF 286
Query: 211 ----------QNKST------------------LTIPVIFALIRPFGQVHEYLTLPTILK 242
QNK T LT+ +I +L+RPFGQ +E L TI K
Sbjct: 287 NIGLELLKRNQNKCTGKNISVEGRVENGAQDNRLTLALIHSLLRPFGQCYELLMPATIAK 346
Query: 243 YFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEI 302
YFMP + V ++
Sbjct: 347 YFMPTWNV------------------------------------------------VLDL 358
Query: 303 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQI 362
L++ TDEELK+E K E +ND I+ I+KS +LLA+R+ QE+ ++ LE+FRLK+ILRLLQ+
Sbjct: 359 LDSFTDEELKREVKPEGRNDYINGIVKSARLLASRLTGQEELIRDLEMFRLKMILRLLQV 418
Query: 363 SSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVLEIV 413
SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DRMA+WIK ++VL +V
Sbjct: 419 SSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDVLGVV 478
Query: 414 LRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWD 473
L+DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWD
Sbjct: 479 LKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWD 538
Query: 474 FSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDD 533
F+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +
Sbjct: 539 FTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQE 598
Query: 534 VMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCL 593
V ++++QAL +H+KILDYSCSQERD QKTIWL C++E KS WV+PALR I+DICCL
Sbjct: 599 VPPEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVDELKSGDGWVLPALRLIRDICCL 658
Query: 594 YEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
Y+ N HA R+ +S NRQ +I+ L ++SL++L+TN+L + ++
Sbjct: 659 YDTTTN---HA---QRTQTSTNRQQVIERLQNDYSLVILVTNSLTAYME 701
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 808 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYMLDNEDLIGKDYLWRVITTGGEEIASKA 865
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+LQ ++ +FH+ FI EC RLR HY I
Sbjct: 866 IDLLKEVSTALGPRLQENIAEFHEMFIGECCSRLRTHYGNI 906
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 752 QAKQIWHCLAVNAVFPADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 809
Query: 854 LSGL 857
SG+
Sbjct: 810 ESGI 813
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DR Q +S
Sbjct: 415 LLQVSSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDV 474
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 475 LGVVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 529
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 530 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 571
>gi|6013474|gb|AAF01345.1| fat facets long isoform [Drosophila melanogaster]
Length = 2747
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/649 (53%), Positives = 440/649 (67%), Gaps = 95/649 (14%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL + D D EPC F+R GLS
Sbjct: 107 FPTTKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELTQAGVDHDCEPCVEFYRNGLST 166
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWK NIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+T
Sbjct: 167 SFAKILTDEAVNSWKNNIHHCILVSCGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNT 226
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + P + + ++++ARP KN RGWLVDLIN FG +GGF LLERF
Sbjct: 227 FNAGRQPDCFAAPDYIWGQLDSNKMYARPPPEPKNARGWLVDLINRFGQLGGFDNLLERF 286
Query: 211 ----------QNKST------------------LTIPVIFALIRPFGQVHEYLTLPTILK 242
QNK T LT+ +I +L+RPFGQ +E L TI K
Sbjct: 287 NIGLELLKRNQNKCTGKNISVEGRVENGAQDNRLTLALIHSLLRPFGQCYELLMPATIAK 346
Query: 243 YFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEI 302
YFMP + V ++
Sbjct: 347 YFMPTWNV------------------------------------------------VLDL 358
Query: 303 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQI 362
L++ TDEELK+E K E +ND I+ I+KS +LLA+R+ QE+ ++ LE+FRLK+ILRLLQ+
Sbjct: 359 LDSFTDEELKREVKPEGRNDYINGIVKSARLLASRLTGQEELIRDLEMFRLKMILRLLQV 418
Query: 363 SSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVLEIV 413
SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DRMA+WIK ++VL +V
Sbjct: 419 SSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDVLGVV 478
Query: 414 LRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWD 473
L+DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWD
Sbjct: 479 LKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWD 538
Query: 474 FSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDD 533
F+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +
Sbjct: 539 FTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQE 598
Query: 534 VMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCL 593
V ++++QAL +H+KILDYSCSQERD QKTIWL C++E KS WV+PALR I+DICCL
Sbjct: 599 VPPEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVDELKSGDGWVLPALRLIRDICCL 658
Query: 594 YEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
Y+ N HA R+ +S NRQ +I+ L ++SL++L+TN+L + ++
Sbjct: 659 YDTTTN---HA---QRTQTSTNRQQVIERLQNDYSLVILVTNSLTAYME 701
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 808 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYMLDNEDLIGKDYLWRVITTGGEEIASKA 865
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+LQ ++ +FH+ FI EC RLR HY I
Sbjct: 866 IDLLKEVSTALGPRLQENIAEFHEMFIGECCSRLRTHYGNI 906
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 752 QAKQIWHCLAVNAVFPADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 809
Query: 854 LSGL 857
SG+
Sbjct: 810 ESGI 813
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DR Q +S
Sbjct: 415 LLQVSSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDV 474
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 475 LGVVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 529
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 530 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 571
>gi|24651753|ref|NP_524612.2| fat facets, isoform A [Drosophila melanogaster]
gi|26006955|sp|P55824.2|FAF_DROME RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase FAF;
AltName: Full=Protein fat facets; AltName:
Full=Ubiquitin thioesterase FAF; AltName:
Full=Ubiquitin-specific-processing protease FAF;
Short=Deubiquitinating enzyme FAF
gi|7302097|gb|AAF57198.1| fat facets, isoform A [Drosophila melanogaster]
Length = 2778
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/649 (53%), Positives = 440/649 (67%), Gaps = 95/649 (14%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL + D D EPC F+R GLS
Sbjct: 107 FPTTKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELTQAGVDHDCEPCVEFYRNGLST 166
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWK NIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+T
Sbjct: 167 SFAKILTDEAVNSWKNNIHHCILVSCGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNT 226
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + P + + ++++ARP KN RGWLVDLIN FG +GGF LLERF
Sbjct: 227 FNAGRQPECFAAPDYIWGQLDSNKMYARPPPEPKNARGWLVDLINRFGQLGGFDNLLERF 286
Query: 211 ----------QNKST------------------LTIPVIFALIRPFGQVHEYLTLPTILK 242
QNK T LT+ +I +L+RPFGQ +E L TI K
Sbjct: 287 NIGLELLKRNQNKCTGKNISVEGRVENGAQDNRLTLALIHSLLRPFGQCYELLMPATIAK 346
Query: 243 YFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEI 302
YFMP + V ++
Sbjct: 347 YFMPTWNV------------------------------------------------VLDL 358
Query: 303 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQI 362
L++ TDEELK+E K E +ND I+ I+KS +LLA+R+ QE+ ++ LE+FRLK+ILRLLQ+
Sbjct: 359 LDSFTDEELKREVKPEGRNDYINGIVKSARLLASRLTGQEELIRDLEMFRLKMILRLLQV 418
Query: 363 SSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVLEIV 413
SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DRMA+WIK ++VL +V
Sbjct: 419 SSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDVLGVV 478
Query: 414 LRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWD 473
L+DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWD
Sbjct: 479 LKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWD 538
Query: 474 FSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDD 533
F+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +
Sbjct: 539 FTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQE 598
Query: 534 VMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCL 593
V ++++QAL +H+KILDYSCSQERD QKTIWL C++E KS WV+PALR I+DICCL
Sbjct: 599 VPPEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVDELKSGDGWVLPALRLIRDICCL 658
Query: 594 YEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
Y+ N HA R+ +S NRQ +I+ L ++SL++L+TN+L + ++
Sbjct: 659 YDTTTN---HA---QRTQTSTNRQQVIERLQNDYSLVILVTNSLTAYME 701
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 808 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYMLDNEDLIGKDYLWRVITTGGEEIASKA 865
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+LQ ++ +FH+ FI EC RLR HY I
Sbjct: 866 IDLLKEVSTALGPRLQENIAEFHEMFIGECCSRLRTHYGNI 906
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 752 QAKQIWHCLAVNAVFPADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 809
Query: 854 LSGL 857
SG+
Sbjct: 810 ESGI 813
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DR Q +S
Sbjct: 415 LLQVSSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDV 474
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 475 LGVVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 529
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 530 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 571
>gi|386766827|ref|NP_001247387.1| fat facets, isoform D [Drosophila melanogaster]
gi|386766833|ref|NP_001247390.1| fat facets, isoform G [Drosophila melanogaster]
gi|383293046|gb|AFH06704.1| fat facets, isoform D [Drosophila melanogaster]
gi|383293049|gb|AFH06707.1| fat facets, isoform G [Drosophila melanogaster]
Length = 2773
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/649 (53%), Positives = 440/649 (67%), Gaps = 95/649 (14%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL + D D EPC F+R GLS
Sbjct: 107 FPTTKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELTQAGVDHDCEPCVEFYRNGLST 166
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWK NIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+T
Sbjct: 167 SFAKILTDEAVNSWKNNIHHCILVSCGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNT 226
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + P + + ++++ARP KN RGWLVDLIN FG +GGF LLERF
Sbjct: 227 FNAGRQPECFAAPDYIWGQLDSNKMYARPPPEPKNARGWLVDLINRFGQLGGFDNLLERF 286
Query: 211 ----------QNKST------------------LTIPVIFALIRPFGQVHEYLTLPTILK 242
QNK T LT+ +I +L+RPFGQ +E L TI K
Sbjct: 287 NIGLELLKRNQNKCTGKNISVEGRVENGAQDNRLTLALIHSLLRPFGQCYELLMPATIAK 346
Query: 243 YFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEI 302
YFMP + V ++
Sbjct: 347 YFMPTWNV------------------------------------------------VLDL 358
Query: 303 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQI 362
L++ TDEELK+E K E +ND I+ I+KS +LLA+R+ QE+ ++ LE+FRLK+ILRLLQ+
Sbjct: 359 LDSFTDEELKREVKPEGRNDYINGIVKSARLLASRLTGQEELIRDLEMFRLKMILRLLQV 418
Query: 363 SSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVLEIV 413
SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DRMA+WIK ++VL +V
Sbjct: 419 SSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDVLGVV 478
Query: 414 LRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWD 473
L+DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWD
Sbjct: 479 LKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWD 538
Query: 474 FSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDD 533
F+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +
Sbjct: 539 FTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQE 598
Query: 534 VMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCL 593
V ++++QAL +H+KILDYSCSQERD QKTIWL C++E KS WV+PALR I+DICCL
Sbjct: 599 VPPEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVDELKSGDGWVLPALRLIRDICCL 658
Query: 594 YEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
Y+ N HA R+ +S NRQ +I+ L ++SL++L+TN+L + ++
Sbjct: 659 YDTTTN---HA---QRTQTSTNRQQVIERLQNDYSLVILVTNSLTAYME 701
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 808 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYMLDNEDLIGKDYLWRVITTGGEEIASKA 865
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+LQ ++ +FH+ FI EC RLR HY I
Sbjct: 866 IDLLKEVSTALGPRLQENIAEFHEMFIGECCSRLRTHYGNI 906
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 752 QAKQIWHCLAVNAVFPADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 809
Query: 854 LSGL 857
SG+
Sbjct: 810 ESGI 813
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DR Q +S
Sbjct: 415 LLQVSSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDV 474
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 475 LGVVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 529
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 530 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 571
>gi|386766829|ref|NP_001247388.1| fat facets, isoform E [Drosophila melanogaster]
gi|383293047|gb|AFH06705.1| fat facets, isoform E [Drosophila melanogaster]
Length = 2761
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/649 (53%), Positives = 440/649 (67%), Gaps = 95/649 (14%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL + D D EPC F+R GLS
Sbjct: 107 FPTTKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELTQAGVDHDCEPCVEFYRNGLST 166
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWK NIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+T
Sbjct: 167 SFAKILTDEAVNSWKNNIHHCILVSCGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNT 226
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + P + + ++++ARP KN RGWLVDLIN FG +GGF LLERF
Sbjct: 227 FNAGRQPECFAAPDYIWGQLDSNKMYARPPPEPKNARGWLVDLINRFGQLGGFDNLLERF 286
Query: 211 ----------QNKST------------------LTIPVIFALIRPFGQVHEYLTLPTILK 242
QNK T LT+ +I +L+RPFGQ +E L TI K
Sbjct: 287 NIGLELLKRNQNKCTGKNISVEGRVENGAQDNRLTLALIHSLLRPFGQCYELLMPATIAK 346
Query: 243 YFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEI 302
YFMP + V ++
Sbjct: 347 YFMPTWNV------------------------------------------------VLDL 358
Query: 303 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQI 362
L++ TDEELK+E K E +ND I+ I+KS +LLA+R+ QE+ ++ LE+FRLK+ILRLLQ+
Sbjct: 359 LDSFTDEELKREVKPEGRNDYINGIVKSARLLASRLTGQEELIRDLEMFRLKMILRLLQV 418
Query: 363 SSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVLEIV 413
SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DRMA+WIK ++VL +V
Sbjct: 419 SSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDVLGVV 478
Query: 414 LRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWD 473
L+DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWD
Sbjct: 479 LKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWD 538
Query: 474 FSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDD 533
F+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +
Sbjct: 539 FTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQE 598
Query: 534 VMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCL 593
V ++++QAL +H+KILDYSCSQERD QKTIWL C++E KS WV+PALR I+DICCL
Sbjct: 599 VPPEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVDELKSGDGWVLPALRLIRDICCL 658
Query: 594 YEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
Y+ N HA R+ +S NRQ +I+ L ++SL++L+TN+L + ++
Sbjct: 659 YDTTTN---HA---QRTQTSTNRQQVIERLQNDYSLVILVTNSLTAYME 701
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 808 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYMLDNEDLIGKDYLWRVITTGGEEIASKA 865
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+LQ ++ +FH+ FI EC RLR HY I
Sbjct: 866 IDLLKEVSTALGPRLQENIAEFHEMFIGECCSRLRTHYGNI 906
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 752 QAKQIWHCLAVNAVFPADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 809
Query: 854 LSGL 857
SG+
Sbjct: 810 ESGI 813
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DR Q +S
Sbjct: 415 LLQVSSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDV 474
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 475 LGVVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 529
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 530 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 571
>gi|198452394|ref|XP_001358753.2| GA15146, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198131914|gb|EAL27896.2| GA15146, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 2812
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/651 (53%), Positives = 439/651 (67%), Gaps = 97/651 (14%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL D D EPC F+R GLS
Sbjct: 107 FPTTKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELTLAGVDHDCEPCVEFYRNGLST 166
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWKYNIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+
Sbjct: 167 SFAKILTDEAVNSWKYNIHHCILVSCGKLLHLIAIHMVRDNPYLLDLLAIVFDPENKFNA 226
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + P + + ++++ARP K+ RGWLVDLIN FG +GGF LLERF
Sbjct: 227 FNAARQPECFATPDCIWGQLDSNKMYARPPPEPKSARGWLVDLINRFGQLGGFDNLLERF 286
Query: 211 ----------QNK--------------------STLTIPVIFALIRPFGQVHEYLTLPTI 240
QNK + LT+ VI +L+RPFGQ HE LT TI
Sbjct: 287 NKGLELLKRNQNKVPSIKSGGSSSSEGEEGGQDNRLTLAVIHSLLRPFGQCHELLTPATI 346
Query: 241 LKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVP 300
KYFMP + V
Sbjct: 347 AKYFMPTWNV------------------------------------------------VL 358
Query: 301 EILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLL 360
++L++ TDEELK+E K E +ND I+ I+KS + LA+R+ QED ++ LE+FRLK+ILRLL
Sbjct: 359 DLLDSFTDEELKREVKPEGRNDYINGIVKSARFLASRLSGQEDLIRDLEMFRLKMILRLL 418
Query: 361 QISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVLE 411
Q+SSFNGKMNALNE+NKV++ VAYY HR PE++ WLT +RMA+WIK ++VL
Sbjct: 419 QVSSFNGKMNALNEINKVLSSVAYYSHRSQPLPHSLPEDDMDWLTAERMAQWIKASDVLG 478
Query: 412 IVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLA 471
IVL+DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLA
Sbjct: 479 IVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLA 538
Query: 472 WDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHS 531
WDF+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS
Sbjct: 539 WDFTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHS 598
Query: 532 DDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDIC 591
+V ++++QAL +H+KILDYSCSQERD QKTIWL C+ E K+ WV+PALR I+DIC
Sbjct: 599 KEVPPEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVGELKAGDSWVLPALRLIRDIC 658
Query: 592 CLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
CLY+ N HAP R+ +S NRQ +I+ L ++SL++L+TN+L + ++
Sbjct: 659 CLYDTTPN---HAP---RTQTSTNRQQVIERLQNDYSLVILVTNSLTAYME 703
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 810 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYILDNEDLIGKDYLWRVITTGGEEIASKA 867
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+L ++++FH+ FI EC RLR HY I
Sbjct: 868 IDLLKEVSTALGPRLLENISEFHEMFIGECCSRLRTHYGNI 908
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 754 QAKQIWHCLAVSAVFPSDREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 811
Query: 854 LSGL 857
SG+
Sbjct: 812 ESGI 815
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEE--EWLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAYY HR PE+ +WLT +R Q ++
Sbjct: 417 LLQVSSFNGKMNALNEINKVLSSVAYYSHRSQPLPHSLPEDDMDWLTAERMAQWIKASDV 476
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 477 LGIVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 531
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 532 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 573
>gi|386766831|ref|NP_001247389.1| fat facets, isoform F [Drosophila melanogaster]
gi|383293048|gb|AFH06706.1| fat facets, isoform F [Drosophila melanogaster]
Length = 2756
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/649 (53%), Positives = 440/649 (67%), Gaps = 95/649 (14%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL + D D EPC F+R GLS
Sbjct: 107 FPTTKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELTQAGVDHDCEPCVEFYRNGLST 166
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWK NIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+T
Sbjct: 167 SFAKILTDEAVNSWKNNIHHCILVSCGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNT 226
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + P + + ++++ARP KN RGWLVDLIN FG +GGF LLERF
Sbjct: 227 FNAGRQPECFAAPDYIWGQLDSNKMYARPPPEPKNARGWLVDLINRFGQLGGFDNLLERF 286
Query: 211 ----------QNKST------------------LTIPVIFALIRPFGQVHEYLTLPTILK 242
QNK T LT+ +I +L+RPFGQ +E L TI K
Sbjct: 287 NIGLELLKRNQNKCTGKNISVEGRVENGAQDNRLTLALIHSLLRPFGQCYELLMPATIAK 346
Query: 243 YFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEI 302
YFMP + V ++
Sbjct: 347 YFMPTWNV------------------------------------------------VLDL 358
Query: 303 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQI 362
L++ TDEELK+E K E +ND I+ I+KS +LLA+R+ QE+ ++ LE+FRLK+ILRLLQ+
Sbjct: 359 LDSFTDEELKREVKPEGRNDYINGIVKSARLLASRLTGQEELIRDLEMFRLKMILRLLQV 418
Query: 363 SSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVLEIV 413
SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DRMA+WIK ++VL +V
Sbjct: 419 SSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDVLGVV 478
Query: 414 LRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWD 473
L+DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWD
Sbjct: 479 LKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWD 538
Query: 474 FSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDD 533
F+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +
Sbjct: 539 FTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQE 598
Query: 534 VMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCL 593
V ++++QAL +H+KILDYSCSQERD QKTIWL C++E KS WV+PALR I+DICCL
Sbjct: 599 VPPEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVDELKSGDGWVLPALRLIRDICCL 658
Query: 594 YEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
Y+ N HA R+ +S NRQ +I+ L ++SL++L+TN+L + ++
Sbjct: 659 YDTTTN---HA---QRTQTSTNRQQVIERLQNDYSLVILVTNSLTAYME 701
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 808 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYMLDNEDLIGKDYLWRVITTGGEEIASKA 865
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+LQ ++ +FH+ FI EC RLR HY I
Sbjct: 866 IDLLKEVSTALGPRLQENIAEFHEMFIGECCSRLRTHYGNI 906
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 752 QAKQIWHCLAVNAVFPADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 809
Query: 854 LSGL 857
SG+
Sbjct: 810 ESGI 813
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DR Q +S
Sbjct: 415 LLQVSSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDV 474
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 475 LGVVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 529
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 530 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 571
>gi|6013475|gb|AAF01346.1| fat facets short isoform [Drosophila melanogaster]
gi|6013476|gb|AAF01347.1| fat facets short isoform [Drosophila melanogaster]
Length = 2711
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/649 (53%), Positives = 440/649 (67%), Gaps = 95/649 (14%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL + D D EPC F+R GLS
Sbjct: 107 FPTTKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELTQAGVDHDCEPCVEFYRNGLST 166
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWK NIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+T
Sbjct: 167 SFAKILTDEAVNSWKNNIHHCILVSCGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNT 226
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + P + + ++++ARP KN RGWLVDLIN FG +GGF LLERF
Sbjct: 227 FNAGRQPDCFAAPDYIWGQLDSNKMYARPPPEPKNARGWLVDLINRFGQLGGFDNLLERF 286
Query: 211 ----------QNKST------------------LTIPVIFALIRPFGQVHEYLTLPTILK 242
QNK T LT+ +I +L+RPFGQ +E L TI K
Sbjct: 287 NIGLELLKRNQNKCTGKNISVEGRVENGAQDNRLTLALIHSLLRPFGQCYELLMPATIAK 346
Query: 243 YFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEI 302
YFMP + V ++
Sbjct: 347 YFMPTWNV------------------------------------------------VLDL 358
Query: 303 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQI 362
L++ TDEELK+E K E +ND I+ I+KS +LLA+R+ QE+ ++ LE+FRLK+ILRLLQ+
Sbjct: 359 LDSFTDEELKREVKPEGRNDYINGIVKSARLLASRLTGQEELIRDLEMFRLKMILRLLQV 418
Query: 363 SSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVLEIV 413
SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DRMA+WIK ++VL +V
Sbjct: 419 SSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDVLGVV 478
Query: 414 LRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWD 473
L+DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWD
Sbjct: 479 LKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWD 538
Query: 474 FSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDD 533
F+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +
Sbjct: 539 FTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQE 598
Query: 534 VMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCL 593
V ++++QAL +H+KILDYSCSQERD QKTIWL C++E KS WV+PALR I+DICCL
Sbjct: 599 VPPEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVDELKSGDGWVLPALRLIRDICCL 658
Query: 594 YEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
Y+ N HA R+ +S NRQ +I+ L ++SL++L+TN+L + ++
Sbjct: 659 YDTTTN---HA---QRTQTSTNRQQVIERLQNDYSLVILVTNSLTAYME 701
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 808 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYMLDNEDLIGKDYLWRVITTGGEEIASKA 865
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+LQ ++ +FH+ FI EC RLR HY I
Sbjct: 866 IDLLKEVSTALGPRLQENIAEFHEMFIGECCSRLRTHYGNI 906
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 752 QAKQIWHCLAVNAVFPADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 809
Query: 854 LSGL 857
SG+
Sbjct: 810 ESGI 813
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DR Q +S
Sbjct: 415 LLQVSSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDV 474
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 475 LGVVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 529
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 530 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 571
>gi|24651755|ref|NP_733455.1| fat facets, isoform C [Drosophila melanogaster]
gi|23172803|gb|AAN14291.1| fat facets, isoform C [Drosophila melanogaster]
Length = 2711
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/649 (53%), Positives = 440/649 (67%), Gaps = 95/649 (14%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL + D D EPC F+R GLS
Sbjct: 107 FPTTKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELTQAGVDHDCEPCVEFYRNGLST 166
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWK NIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+T
Sbjct: 167 SFAKILTDEAVNSWKNNIHHCILVSCGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNT 226
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + P + + ++++ARP KN RGWLVDLIN FG +GGF LLERF
Sbjct: 227 FNAGRQPECFAAPDYIWGQLDSNKMYARPPPEPKNARGWLVDLINRFGQLGGFDNLLERF 286
Query: 211 ----------QNKST------------------LTIPVIFALIRPFGQVHEYLTLPTILK 242
QNK T LT+ +I +L+RPFGQ +E L TI K
Sbjct: 287 NIGLELLKRNQNKCTGKNISVEGRVENGAQDNRLTLALIHSLLRPFGQCYELLMPATIAK 346
Query: 243 YFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEI 302
YFMP + V ++
Sbjct: 347 YFMPTWNV------------------------------------------------VLDL 358
Query: 303 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQI 362
L++ TDEELK+E K E +ND I+ I+KS +LLA+R+ QE+ ++ LE+FRLK+ILRLLQ+
Sbjct: 359 LDSFTDEELKREVKPEGRNDYINGIVKSARLLASRLTGQEELIRDLEMFRLKMILRLLQV 418
Query: 363 SSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVLEIV 413
SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DRMA+WIK ++VL +V
Sbjct: 419 SSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDVLGVV 478
Query: 414 LRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWD 473
L+DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWD
Sbjct: 479 LKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWD 538
Query: 474 FSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDD 533
F+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +
Sbjct: 539 FTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQE 598
Query: 534 VMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCL 593
V ++++QAL +H+KILDYSCSQERD QKTIWL C++E KS WV+PALR I+DICCL
Sbjct: 599 VPPEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVDELKSGDGWVLPALRLIRDICCL 658
Query: 594 YEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
Y+ N HA R+ +S NRQ +I+ L ++SL++L+TN+L + ++
Sbjct: 659 YDTTTN---HA---QRTQTSTNRQQVIERLQNDYSLVILVTNSLTAYME 701
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 808 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYMLDNEDLIGKDYLWRVITTGGEEIASKA 865
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+LQ ++ +FH+ FI EC RLR HY I
Sbjct: 866 IDLLKEVSTALGPRLQENIAEFHEMFIGECCSRLRTHYGNI 906
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 752 QAKQIWHCLAVNAVFPADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 809
Query: 854 LSGL 857
SG+
Sbjct: 810 ESGI 813
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DR Q +S
Sbjct: 415 LLQVSSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDV 474
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 475 LGVVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 529
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 530 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 571
>gi|390178144|ref|XP_003736579.1| GA15146, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859339|gb|EIM52652.1| GA15146, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 2730
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/651 (53%), Positives = 439/651 (67%), Gaps = 97/651 (14%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL D D EPC F+R GLS
Sbjct: 107 FPTTKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELTLAGVDHDCEPCVEFYRNGLST 166
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWKYNIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+
Sbjct: 167 SFAKILTDEAVNSWKYNIHHCILVSCGKLLHLIAIHMVRDNPYLLDLLAIVFDPENKFNA 226
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + P + + ++++ARP K+ RGWLVDLIN FG +GGF LLERF
Sbjct: 227 FNAARQPECFATPDCIWGQLDSNKMYARPPPEPKSARGWLVDLINRFGQLGGFDNLLERF 286
Query: 211 ----------QNK--------------------STLTIPVIFALIRPFGQVHEYLTLPTI 240
QNK + LT+ VI +L+RPFGQ HE LT TI
Sbjct: 287 NKGLELLKRNQNKVPSIKSGGSSSSEGEEGGQDNRLTLAVIHSLLRPFGQCHELLTPATI 346
Query: 241 LKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVP 300
KYFMP + V
Sbjct: 347 AKYFMPTWNV------------------------------------------------VL 358
Query: 301 EILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLL 360
++L++ TDEELK+E K E +ND I+ I+KS + LA+R+ QED ++ LE+FRLK+ILRLL
Sbjct: 359 DLLDSFTDEELKREVKPEGRNDYINGIVKSARFLASRLSGQEDLIRDLEMFRLKMILRLL 418
Query: 361 QISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVLE 411
Q+SSFNGKMNALNE+NKV++ VAYY HR PE++ WLT +RMA+WIK ++VL
Sbjct: 419 QVSSFNGKMNALNEINKVLSSVAYYSHRSQPLPHSLPEDDMDWLTAERMAQWIKASDVLG 478
Query: 412 IVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLA 471
IVL+DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLA
Sbjct: 479 IVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLA 538
Query: 472 WDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHS 531
WDF+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS
Sbjct: 539 WDFTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHS 598
Query: 532 DDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDIC 591
+V ++++QAL +H+KILDYSCSQERD QKTIWL C+ E K+ WV+PALR I+DIC
Sbjct: 599 KEVPPEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVGELKAGDSWVLPALRLIRDIC 658
Query: 592 CLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
CLY+ N HAP R+ +S NRQ +I+ L ++SL++L+TN+L + ++
Sbjct: 659 CLYDTTPN---HAP---RTQTSTNRQQVIERLQNDYSLVILVTNSLTAYME 703
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 810 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYILDNEDLIGKDYLWRVITTGGEEIASKA 867
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+L ++++FH+ FI EC RLR HY I
Sbjct: 868 IDLLKEVSTALGPRLLENISEFHEMFIGECCSRLRTHYGNI 908
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 754 QAKQIWHCLAVSAVFPSDREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 811
Query: 854 LSGL 857
SG+
Sbjct: 812 ESGI 815
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEE--EWLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAYY HR PE+ +WLT +R Q ++
Sbjct: 417 LLQVSSFNGKMNALNEINKVLSSVAYYSHRSQPLPHSLPEDDMDWLTAERMAQWIKASDV 476
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 477 LGIVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 531
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 532 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 573
>gi|195145090|ref|XP_002013529.1| GL23356 [Drosophila persimilis]
gi|194102472|gb|EDW24515.1| GL23356 [Drosophila persimilis]
Length = 2737
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/652 (53%), Positives = 439/652 (67%), Gaps = 98/652 (15%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL D D EPC F+R GLS
Sbjct: 105 FPTTKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELTLAGVDHDCEPCVEFYRNGLST 164
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWKYNIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+
Sbjct: 165 SFAKILTDEAVNSWKYNIHHCILVSCGKLLHLIAIHMVRDNPYLLDLLAIVFDPENKFNA 224
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + P + + ++++ARP K+ RGWLVDLIN FG +GGF LLERF
Sbjct: 225 FNAARQPECFATPDCIWGQLDSNKMYARPPPEPKSARGWLVDLINRFGQLGGFDNLLERF 284
Query: 211 ----------QNK---------------------STLTIPVIFALIRPFGQVHEYLTLPT 239
QNK + LT+ VI +L+RPFGQ HE LT T
Sbjct: 285 NKGLELLKRNQNKVPSIKSGGSSSSEGGEEGGQDNRLTLAVIHSLLRPFGQCHELLTPAT 344
Query: 240 ILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIV 299
I KYFMP + V
Sbjct: 345 IAKYFMPTWNV------------------------------------------------V 356
Query: 300 PEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRL 359
++L++ TDEELK+E K E +ND I+ I+KS + LA+R+ QED ++ LE+FRLK+ILRL
Sbjct: 357 LDLLDSFTDEELKREVKPEGRNDYINGIVKSARFLASRLSGQEDLIRDLEMFRLKMILRL 416
Query: 360 LQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVL 410
LQ+SSFNGKMNALNE+NKV++ VAYY HR PE++ WLT +RMA+WIK ++VL
Sbjct: 417 LQVSSFNGKMNALNEINKVLSSVAYYSHRSQPLPHSLPEDDMDWLTAERMAQWIKASDVL 476
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVL+DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKNVH+LLAKL
Sbjct: 477 GIVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKL 536
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDF+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAH
Sbjct: 537 AWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAH 596
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
S +V ++++QAL +H+KILDYSCSQERD QKTIWL C+ E K+ WV+PALR I+DI
Sbjct: 597 SKEVPPEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVGELKAGDSWVLPALRLIRDI 656
Query: 591 CCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
CCLY+ N HAP R+ +S NRQ +I+ L ++SL++L+TN+L + ++
Sbjct: 657 CCLYDTTPN---HAP---RTQTSTNRQQVIERLQNDYSLVILVTNSLTAYME 702
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 809 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYILDNEDLIGKDYLWRVITTGGEEIASKA 866
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+L ++++FH+ FI EC RLR HY I
Sbjct: 867 IDLLKEVSTALGPRLLENISEFHEMFIGECCSRLRTHYGNI 907
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 753 QAKQIWHCLAVSAVFPSDREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 810
Query: 854 LSGL 857
SG+
Sbjct: 811 ESGI 814
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEE--EWLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAYY HR PE+ +WLT +R Q ++
Sbjct: 416 LLQVSSFNGKMNALNEINKVLSSVAYYSHRSQPLPHSLPEDDMDWLTAERMAQWIKASDV 475
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 476 LGIVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 530
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 531 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 572
>gi|156366894|ref|XP_001627156.1| predicted protein [Nematostella vectensis]
gi|156214057|gb|EDO35056.1| predicted protein [Nematostella vectensis]
Length = 2489
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/658 (52%), Positives = 446/658 (67%), Gaps = 62/658 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP+ +L+ LD I+ RWVVPVLP+ ELE L+ +I+LC+ D SE CQRFFR+GL+
Sbjct: 68 FPLAELSKLDEMINRPRWVVPVLPKGELEVLLDVSIKLCRAGLDTKSEDCQRFFRDGLTT 127
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KIL D+AV+ WKY IH CI N +KL+EL V KL QD FPLLD+L + FNP ++F+
Sbjct: 128 SFHKILNDEAVNGWKYEIHRCILKNTEKLIELCVTKLSQDWFPLLDLLALAFNPLSRFNI 187
Query: 155 FNSNQQSISVPVNSNIADD-EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNK 213
+N + S S+P + + + +A+ D ++ +GWLVDL+N FGS+ GF IL +R K
Sbjct: 188 YNGARPSESLPQGAPVTEGITQYAKSPDA-RSPKGWLVDLVNKFGSLDGFSILRDRICGK 246
Query: 214 STLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKN 273
LT+P++ AL++PFG E LT T+ +YF+P+++ V
Sbjct: 247 ENLTVPLLSALLKPFGSCAEVLTPQTVEEYFLPVIDFV---------------------- 284
Query: 274 DAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKL 333
P LE+L+D+ELKKEAKNE+KNDA+S IIK+ K
Sbjct: 285 --------------------------PGFLESLSDQELKKEAKNEAKNDALSSIIKALKN 318
Query: 334 LAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP--- 390
LA ++ +ED KQLE FRLK+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH
Sbjct: 319 LAGKITSKEDIPKQLETFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHTTAD 378
Query: 391 EEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWA 450
EEEWLT +RMA+WI N VL IVL+D+LHQPQYVEKLEKI+RF+IKEKALSL DLD++WA
Sbjct: 379 EEEWLTAERMAEWIHANKVLSIVLKDNLHQPQYVEKLEKIIRFVIKEKALSLDDLDSIWA 438
Query: 451 AQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAE 510
AQ GKHDAI+KN+H+LLAKLAWDFSP QLDHLF CFQ SWT A++KQ EKLLELIRRLAE
Sbjct: 439 AQIGKHDAIIKNIHDLLAKLAWDFSPEQLDHLFSCFQESWTCASKKQREKLLELIRRLAE 498
Query: 511 DDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCI 570
DDK+GVMA KVL L WSLAHSDDV DIM+ AL++H+KILDYSCSQ+RD QKT W+ C+
Sbjct: 499 DDKEGVMAHKVLGLLWSLAHSDDVPIDIMDLALSAHIKILDYSCSQDRDSQKTQWIDRCV 558
Query: 571 EEFKSNPKWVVPALRQIKDICCL-YEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSL 629
EE + N WV+PAL+ IK+IC L YE QN SH R+ R +I+ L HSL
Sbjct: 559 EELR-NDSWVLPALKHIKEICMLFYEAPQNY-SHM---QRNPHVFYRHEVINQLQMTHSL 613
Query: 630 IMLITNNLCSLLQ-ISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
+ L+ +NL ++ ++S N ++ VN+ + Y H +E LT R L + G
Sbjct: 614 VTLVADNLAKYMEKVTSLVAGKNDVD-VNEFLPD-GRYNHAQQVQERLTFLRFLLKDG 669
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FF+ VNI E KLV K+R+ L+++ DL+G +YLW+V+ + ++IA RA
Sbjct: 733 LTENGIKCFERFFRGVNIKEHKLV--SKRRAYLIEDLDLVGVDYLWQVVLRSSDEIASRA 790
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
I+L+KE T+LGP L++ + H FI C +++
Sbjct: 791 IELIKETYTNLGPSLRAKQLEIHDKFIQTCTGKIQ 825
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 42/55 (76%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+ IW LA++A+F DRE CFKWFSKLM DEPDLDP++ FFE +VL +P
Sbjct: 676 PQAKLIWQCLAEKAVFPSDRECCFKWFSKLMGDEPDLDPEISLSFFEGNVLKLDP 730
>gi|219880810|gb|ACL51678.1| ubiquitin specific peptidase 9 Y-linked, partial [Macaca mulatta]
Length = 2454
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/568 (58%), Positives = 414/568 (72%), Gaps = 57/568 (10%)
Query: 78 DVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP 137
DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH CI NN +L+EL V KL QD FP
Sbjct: 5 DVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFP 64
Query: 138 LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLF 197
LL++L M NP KFH +N + + N+ + +DE+FA D + +GWLVDLIN F
Sbjct: 65 LLELLAMALNPHCKFHIYNGTRPCELISSNAQLPEDELFACSSDP-RTPKGWLVDLINKF 123
Query: 198 GSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILEN 257
G++ GFQIL +RF N S L + +I ALI+PFGQ +E+L+ T+ KYF+P++E
Sbjct: 124 GTLNGFQILHDRFFNGSALNVQIIAALIKPFGQCYEFLSQHTVKKYFIPVIE-------- 175
Query: 258 LTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKN 317
IVP +LENLTDEELKKEAKN
Sbjct: 176 ----------------------------------------IVPHLLENLTDEELKKEAKN 195
Query: 318 ESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNK 377
E+KNDA+S+IIKS K LA+R+ Q++T++ LEIFRLK+ILRLLQISSFNGKMNALNE+NK
Sbjct: 196 EAKNDALSMIIKSLKNLASRISGQDETIQNLEIFRLKMILRLLQISSFNGKMNALNEINK 255
Query: 378 VIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFL 434
VI+ V+YY HRH EEEWLT +RMA+WI+ N++L IVL+DSLHQPQYVEKLEKILRF+
Sbjct: 256 VISSVSYYTHRHSNPEEEEWLTAERMAEWIQQNSILSIVLQDSLHQPQYVEKLEKILRFV 315
Query: 435 IKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSAN 494
IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A+
Sbjct: 316 IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPGQLDHLFDCFKASWTNAS 375
Query: 495 RKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSC 554
+KQ EKLLELIRRLA+DDKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSC
Sbjct: 376 KKQREKLLELIRRLADDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSC 435
Query: 555 SQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSS 613
SQ+RD QK W+ IEE + N KWV+PAL+QI++IC L+ E QNL+ + RSH
Sbjct: 436 SQDRDAQKIQWIDHFIEELRGNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSHHI 491
Query: 614 NNRQSIIDILIKNHSLIMLITNNLCSLL 641
R +I+ L +NH+L+ L+ NL + +
Sbjct: 492 FYRHDLINQLQQNHALVTLVAENLATYM 519
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKL+ K+RS ++D+ +LIG +YLWRV+ + ++IA RA
Sbjct: 627 LTENGMKCFERFFKAVNCREGKLI--AKRRSYMMDDLELIGLDYLWRVVIQSSDEIANRA 684
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLK++ T+LGP+L+ + H+ FI C DRL+A YDT+
Sbjct: 685 IDLLKDIYTNLGPRLKVNQVVIHEDFIQSCFDRLKASYDTL 725
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 570 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 624
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNE+NKVI+ V+YY HRH EEEWLT +R
Sbjct: 237 LLQISSFNGKMNALNEINKVISSVSYYTHRHSNPEEEEWLTAER 280
>gi|195354522|ref|XP_002043746.1| GM16452 [Drosophila sechellia]
gi|194128946|gb|EDW50989.1| GM16452 [Drosophila sechellia]
Length = 2740
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/649 (52%), Positives = 439/649 (67%), Gaps = 95/649 (14%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL +L KIS+ RWVVPVLPEQELE L+ AAIEL + D D EPC F+R GLS
Sbjct: 107 FPTTKLRLLMQKISNPRWVVPVLPEQELEVLLNAAIELAQAGVDHDCEPCVEFYRHGLST 166
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTD+AV+SWK NIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+T
Sbjct: 167 SFTKILTDEAVNSWKNNIHHCILVSCGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNT 226
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + P + + ++++ARP KN RGWLVDLIN FG +GGF LLERF
Sbjct: 227 FNAARQPECFAAPDYIWGQLDSNKMYARPPPEPKNARGWLVDLINRFGQLGGFDNLLERF 286
Query: 211 ----------QNKST------------------LTIPVIFALIRPFGQVHEYLTLPTILK 242
QNK T LT+ +I +L+RPFGQ +E L TI K
Sbjct: 287 NTGLELLKRNQNKCTGKNVGVEGSVENGAQDNRLTLALIHSLLRPFGQCYELLMPATIAK 346
Query: 243 YFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEI 302
YFMP + V ++
Sbjct: 347 YFMPTWNV------------------------------------------------VLDL 358
Query: 303 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQI 362
L++ TDEELK+E K E +ND I+ I+KS +LLA+R+ QE+ ++ LE+FRLK+ILRLLQ+
Sbjct: 359 LDSFTDEELKREVKPEGRNDYINGIVKSARLLASRLTGQEELIRDLEMFRLKMILRLLQV 418
Query: 363 SSFNGKMNALNEVNKVIAGVAYY-------PHRHPEEE--WLTPDRMAKWIKDNNVLEIV 413
SSFNGKMNALNE+NKV+ VAY+ PH PE+E WLT +RMA+WIK ++VL +V
Sbjct: 419 SSFNGKMNALNEINKVLYSVAYFSHRSQPVPHYMPEDEMDWLTAERMAQWIKSSDVLGVV 478
Query: 414 LRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWD 473
L+DSLHQPQYVEKLEKI+RFLIK++AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWD
Sbjct: 479 LKDSLHQPQYVEKLEKIIRFLIKQQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWD 538
Query: 474 FSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDD 533
F+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +
Sbjct: 539 FTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQE 598
Query: 534 VMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCL 593
V ++++QAL +H+KILDYSCS ERD Q+TIWL C++E KS WV+PALR I+DICCL
Sbjct: 599 VPPEVLDQALGAHVKILDYSCSDERDAQRTIWLDKCVDELKSGDGWVLPALRLIRDICCL 658
Query: 594 YEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
Y+ N HA R+ +S RQ +I+ L ++SL++L+TN+L + ++
Sbjct: 659 YDTTTN---HA---QRAQTSTIRQQVIERLQNDYSLVILVTNSLTAYME 701
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 808 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYILDNEDLIGKDYLWRVITTGGEEIASKA 865
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+LQ ++ +FH+ FI EC RLR HY I
Sbjct: 866 IDLLKEVSTALGPRLQENIAEFHEMFIGECCSRLRTHYGNI 906
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 752 QAKQIWHCLAVNAVFPADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 809
Query: 854 LSGL 857
SG+
Sbjct: 810 ESGI 813
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYY-------PHRHPEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV+ VAY+ PH PE+E WLT +R Q +S
Sbjct: 415 LLQVSSFNGKMNALNEINKVLYSVAYFSHRSQPVPHYMPEDEMDWLTAERMAQWIKSSDV 474
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 475 LGVVLKDSLHQPQYVEKLEKIIRFLIKQQALTLDDLDAV-----WRAQAGKHEAIVKNVH 529
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 530 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 571
>gi|195575384|ref|XP_002105659.1| GD21604 [Drosophila simulans]
gi|194201586|gb|EDX15162.1| GD21604 [Drosophila simulans]
Length = 2736
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/684 (50%), Positives = 450/684 (65%), Gaps = 99/684 (14%)
Query: 4 PQPGTSSDKDISQSSSHRKEGTSCG----PGCTCKFPVEKLAILDSKISSSRWVVPVLPE 59
P G+ S D++ S S ++ FP KL +L KIS+ RWVVPVLPE
Sbjct: 72 PATGSQSSDDVAASLSANSVDSTITIVPPEKLISSFPTTKLRLLMQKISNPRWVVPVLPE 131
Query: 60 QELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNN 119
QELE L+ AAIEL + D D EPC F+R GLS SFTKILTD+AV+SWK NIH+CI +
Sbjct: 132 QELEVLLNAAIELAQAGVDHDCEPCVEFYRHGLSTSFTKILTDEAVNSWKNNIHHCILVS 191
Query: 120 CQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQ--SISVP--VNSNIADDEI 175
C KLL LI + + +D LLD+L +VF+P NKF+TFN+ +Q + P + + +++
Sbjct: 192 CGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNTFNAARQPECFAAPDYIWGQLDSNKM 251
Query: 176 FARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF----------QNKST---------- 215
+ARP KN RGWLVDLIN FG +GGF LLERF QNK T
Sbjct: 252 YARPPPEPKNARGWLVDLINRFGQLGGFDNLLERFNTGLELLKRNQNKCTGKNVGVEGSV 311
Query: 216 --------LTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEA 267
LT+ +I +L+RPFGQ +E L TI KYFMP +
Sbjct: 312 ENGAQDNRLTLALIHSLLRPFGQCYELLMPATIAKYFMPTWNV----------------- 354
Query: 268 KNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVI 327
V ++L++ TDEELK+E K E +ND I+ I
Sbjct: 355 -------------------------------VLDLLDSFTDEELKREVKPEGRNDYINGI 383
Query: 328 IKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYY-- 385
+KS +LLA+R+ QE+ ++ LE+FRLK+ILRLLQ+SSFNGKMNALNE+NKV+ VAY+
Sbjct: 384 VKSARLLASRLTGQEELIRDLEMFRLKMILRLLQVSSFNGKMNALNEINKVLYSVAYFSH 443
Query: 386 -----PHRHPEEE--WLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEK 438
PH PE+E WLT +RMA+WIK ++VL +VL+DSLHQPQYVEKLEKI+RFLIK++
Sbjct: 444 RSQPVPHYMPEDEMDWLTAERMAQWIKSSDVLGVVLKDSLHQPQYVEKLEKIIRFLIKQQ 503
Query: 439 ALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQT 498
AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWDF+P QLDHLF FQAS T+AN++Q
Sbjct: 504 ALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQR 563
Query: 499 EKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQER 558
E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +V ++++QAL +H+KILDYSCS ER
Sbjct: 564 ERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQEVPPEVLDQALGAHVKILDYSCSDER 623
Query: 559 DKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQS 618
D Q+TIWL C++E KS WV+PALR I+DICCLY+ N HA R+ +S RQ
Sbjct: 624 DAQRTIWLDKCVDELKSGDGWVLPALRLIRDICCLYDTTTN---HA---QRAQTSTIRQQ 677
Query: 619 IIDILIKNHSLIMLITNNLCSLLQ 642
+I+ L ++SL++L+TN+L + ++
Sbjct: 678 VIERLQNDYSLVILVTNSLTAYME 701
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 808 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYILDNEDLIGKDYLWRVITTGGEEIASKA 865
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+LQ ++ +FH+ FI EC RLR HY I
Sbjct: 866 IDLLKEVSTALGPRLQENIAEFHEMFIGECCSRLRTHYGNI 906
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 752 QAKQIWHCLAVNAVFPADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 809
Query: 854 LSGL 857
SG+
Sbjct: 810 ESGI 813
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYY-------PHRHPEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV+ VAY+ PH PE+E WLT +R Q +S
Sbjct: 415 LLQVSSFNGKMNALNEINKVLYSVAYFSHRSQPVPHYMPEDEMDWLTAERMAQWIKSSDV 474
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 475 LGVVLKDSLHQPQYVEKLEKIIRFLIKQQALTLDDLDAV-----WRAQAGKHEAIVKNVH 529
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 530 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 571
>gi|157124346|ref|XP_001660433.1| ubiquitin specific protease 9/faf [Aedes aegypti]
gi|108874054|gb|EAT38279.1| AAEL009824-PA, partial [Aedes aegypti]
Length = 1953
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/855 (44%), Positives = 503/855 (58%), Gaps = 163/855 (19%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP +KL+ L KIS+SRWVVPVLP QELECL+ AAI L + D EPC +F+REGL+
Sbjct: 8 FPEDKLSSLTIKISNSRWVVPVLPNQELECLLNAAIRLSQAGLDDKCEPCMKFYREGLTT 67
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV SWKYNIH+CI +C KLL LI L + D LL +L +VF+P NKFHT
Sbjct: 68 SFIKILTDEAVSSWKYNIHHCILMSCSKLLHLIALHMKHDNPHLLSLLAVVFDPENKFHT 127
Query: 155 FN-SNQQSISVPVNSN---IADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
N S Q + + + + + + +I+ARP KN RGWLVDLIN FG GF LER
Sbjct: 128 QNASRQMELYLSLGESEEPLQEGKIYARPPPEPKNPRGWLVDLINRFGECKGFDNFLERM 187
Query: 211 Q--------------NKSTLTIPVIFA-------------------LIRPFGQVHEYLTL 237
+KS + A L+RPFGQ E LT+
Sbjct: 188 NVGIALFRKQREIASSKSLDSATTSSASANTSADESGKLSLLLLHTLLRPFGQCGELLTV 247
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
T+ KYFMPI ++
Sbjct: 248 STVEKYFMPIWDV----------------------------------------------- 260
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+ EILE L+D+ELK+EAK E KND I+ I+K + L RVP+QE+ ++ LE+ RL+IIL
Sbjct: 261 -ILEILETLSDDELKREAKFEGKNDIITGIVKYARALINRVPNQENLLRALEMCRLRIIL 319
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEE---WLTPDRMAKWIKDNNVLEIVL 414
R+LQISSFNGKMNALNE+NKV+ V+YYP+R E+ L ++MAKWI+DN+VL IVL
Sbjct: 320 RVLQISSFNGKMNALNEINKVLGFVSYYPNRQMTEDEVDVLNAEKMAKWIRDNDVLGIVL 379
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
RDSLHQPQYVEKLEKILRFLIKEK+L+ DLDAVW AQAGKH+AIVKNVH+LLAKLAWDF
Sbjct: 380 RDSLHQPQYVEKLEKILRFLIKEKSLTFDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWDF 439
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDV 534
+ QLDHLF CFQAS +AN+KQ E+LLEL RRLAEDDK+GVMA KVL LFW+LAHS D+
Sbjct: 440 NAEQLDHLFKCFQASMKTANKKQRERLLELNRRLAEDDKNGVMAQKVLKLFWTLAHSADI 499
Query: 535 MTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLY 594
++++QALASH+KILDYSCSQERD QKT+WL C+EE K+ +W +PALR I++IC LY
Sbjct: 500 PPEVLDQALASHVKILDYSCSQERDAQKTMWLDKCVEELKAGDEWALPALRLIREICTLY 559
Query: 595 EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMN-AL 653
E +SH P R H R+ +ID L +H+L++L+T +L + K+N ++
Sbjct: 560 E---TTSSHTP---RVHQVLTRRQVIDRLQNDHTLVILVTTSLTKYMDKVRAQVKLNPSI 613
Query: 654 NEVNKVIAGVAYYPHRHPEEE--------------WLTPDR------------QLTESGL 687
N ++ ++ YPH +E WL D+
Sbjct: 614 NPMHLLLD--KRYPHPQQIQERLEFLKFLLKDGQLWLCADQAKQIWQCLAVNAAFPSDRE 671
Query: 688 KCFEKFFK------SVNIGEGKLVLK---VKKRSLLLDNADLIGAEYLWRVITNA----- 733
+CF F K ++ G K + +K +LL + + E ++ + +
Sbjct: 672 ECFRWFGKLMGDEPDLDPGINKDFFENNLLKLDPVLLTESGIKCFERFFKAVNSKEERLK 731
Query: 734 --------------GEDIAFRAI------------DLLKEVSTHLGPKLQSSLTQFHKTF 767
G+D +R I DLLKEVST LGP+L +++ +FH+ F
Sbjct: 732 GKQRGYVLDNEDLIGKDYLWRVITDADEEIACKAIDLLKEVSTALGPRLLANVCEFHENF 791
Query: 768 IAECLDRLRAHYDTI 782
I+EC DRL+++YDT+
Sbjct: 792 ISECCDRLQSYYDTV 806
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPI 848
+A+QIW LA A F DRE CF+WF KLM DEPDLDP + KDFFE ++L +P+
Sbjct: 652 QAKQIWQCLAVNAAFPSDREECFRWFGKLMGDEPDLDPGINKDFFENNLLKLDPV 706
>gi|195113269|ref|XP_002001190.1| GI22109 [Drosophila mojavensis]
gi|193917784|gb|EDW16651.1| GI22109 [Drosophila mojavensis]
Length = 2831
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/652 (52%), Positives = 438/652 (67%), Gaps = 98/652 (15%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL + D D EPC F+R GL+
Sbjct: 126 FPTAKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELAQAGVDHDCEPCVEFYRNGLTT 185
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWKYNIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+T
Sbjct: 186 SFAKILTDEAVNSWKYNIHHCILVSCGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNT 245
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + P + + ++++A+P KN RGWLVDLIN FG +GGF LLERF
Sbjct: 246 FNAARQPECFAAPDCIWGVLDSNKMYAKPPPEPKNPRGWLVDLINRFGQLGGFDNLLERF 305
Query: 211 ----------QNK---------------------STLTIPVIFALIRPFGQVHEYLTLPT 239
QN + LT+ +I +L+RPFGQ +E LT T
Sbjct: 306 NSGLELLKRNQNSKGAVKSIASNESMGADGAGQDNRLTLSLIHSLLRPFGQCYELLTPAT 365
Query: 240 ILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIV 299
I KYFMP + V
Sbjct: 366 IAKYFMPTWNV------------------------------------------------V 377
Query: 300 PEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRL 359
++L++ TD+ELK+E K E +ND I+ I+KS + LA+R+ QE+ ++ LE+FRLK+ILRL
Sbjct: 378 LDLLDSFTDDELKREVKPEGRNDYINGIVKSARSLASRLTGQEELIRDLEMFRLKMILRL 437
Query: 360 LQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVL 410
LQ+SSFNGKMNALNE+NKV++ VAYY HR PE+E WLT +RMA+WIK ++VL
Sbjct: 438 LQVSSFNGKMNALNEINKVLSSVAYYSHRSQPLPHCLPEDEMDWLTAERMAQWIKSSDVL 497
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVL+DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKN+H+LLAKL
Sbjct: 498 GIVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNMHDLLAKL 557
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDF+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAH
Sbjct: 558 AWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAH 617
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
S +V ++++QAL +H+KILDYSCSQERD QKTIWL C+ E KS WV+PALR I+DI
Sbjct: 618 SQEVPPEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVGELKSGDSWVLPALRLIRDI 677
Query: 591 CCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
CCLY+ N HAP R+ + NR +I+ L ++SL++L+TN+L + ++
Sbjct: 678 CCLYDTTPN---HAP---RTQTGTNRLQVIERLQNDYSLVILVTNSLTAYME 723
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 830 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYILDNEDLIGKDYLWRVITTGGEEIANKA 887
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+LQ +TQFH+ FI EC RLR HY I
Sbjct: 888 IDLLKEVSTALGPRLQEHITQFHEMFIGECCSRLRTHYSNI 928
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L +P
Sbjct: 774 QAKQIWHCLAVNAVFPSDREECFRWFGKLMGEEPDLDPGINKDFFENNILQLDP 827
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAYY HR PE+E WLT +R Q +S
Sbjct: 437 LLQVSSFNGKMNALNEINKVLSSVAYYSHRSQPLPHCLPEDEMDWLTAERMAQWIKSSDV 496
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 497 LGIVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNMH 551
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 552 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 593
>gi|332860581|ref|XP_003317476.1| PREDICTED: LOW QUALITY PROTEIN: probable ubiquitin
carboxyl-terminal hydrolase FAF-X [Pan troglodytes]
Length = 2497
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 352/653 (53%), Positives = 431/653 (66%), Gaps = 90/653 (13%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K SE R R
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKEIISQSENTIRGQR------------------------ 121
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 122 -CIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 180
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 181 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 239
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 240 FLTLHTVKKYFLPIIE-------------------------------------------- 255
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 256 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 311
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 312 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 371
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 372 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 431
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 432 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 491
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 492 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 551
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 552 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 600
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 707 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 764
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 765 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 805
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 650 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 704
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 317 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 360
>gi|198419740|ref|XP_002123585.1| PREDICTED: similar to ubiquitin specific peptidase 9 [Ciona
intestinalis]
Length = 2595
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/640 (50%), Positives = 422/640 (65%), Gaps = 65/640 (10%)
Query: 34 KFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLS 93
+FP+ +L L+ I+ ++WVVPVLP +LE L++ AI K ++ + PC+RF L
Sbjct: 110 EFPMVELDQLEEMINRTQWVVPVLPNGQLEVLLQCAI---KQSTQAITVPCKRFLNSSLV 166
Query: 94 ISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFH 153
+SFTKILTDDAV +WK NIH CIY N L+EL + KL D PLL++L M NP K+H
Sbjct: 167 VSFTKILTDDAVSNWKLNIHECIYKNILLLIELCISKLSDDFPPLLELLGMAINPHCKYH 226
Query: 154 TFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNK 213
+N+ + S SVP ++ + DDE++ARP D + RGWLVDL+N FG + GF++L +RFQ+
Sbjct: 227 IYNAQRASKSVPFDAQLKDDELYARPADT-RQPRGWLVDLVNYFGKLDGFEMLQKRFQSG 285
Query: 214 STLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKN 273
+ L +PVI ALIRPFG+V E LT YF+ ++E
Sbjct: 286 TALNVPVIVALIRPFGEVSELLTAHICQTYFLSVIE------------------------ 321
Query: 274 DAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEA--KNESKNDAISVIIKSC 331
+V L++LTD+E+KKEA + + + D+ S+I+KS
Sbjct: 322 ------------------------VVINRLDSLTDDEIKKEANKQEQQRGDSFSIILKSL 357
Query: 332 KLLAARVP--HQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPH-R 388
K + R+ E+ V+ +E+FRLK+ILRLL+ISSFNGKMNALNEVNKVI V+YYPH R
Sbjct: 358 KRILLRISLNEVEEKVRAIELFRLKMILRLLKISSFNGKMNALNEVNKVIHSVSYYPHSR 417
Query: 389 HP--EEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLD 446
H EE W+T ++MA+W+K+N VL IVL D+LHQPQYVEKLEKILRF+IKEK+L+L DL
Sbjct: 418 HSLDEEVWITAEKMAEWLKENKVLSIVLCDNLHQPQYVEKLEKILRFIIKEKSLTLDDLG 477
Query: 447 AVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIR 506
++W AQAGKH+AIVKNVHELLAKLAWDFS QLDHLF F+ SW A++KQ EKLLELIR
Sbjct: 478 SIWNAQAGKHEAIVKNVHELLAKLAWDFSAEQLDHLFELFKESWAGASKKQREKLLELIR 537
Query: 507 RLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWL 566
RLAEDDKDGVMA KVLNL W+LAHSDDV T+IM+QAL++H KILDYSCSQ+RD QK W+
Sbjct: 538 RLAEDDKDGVMAHKVLNLLWNLAHSDDVPTEIMDQALSAHKKILDYSCSQDRDNQKLHWI 597
Query: 567 QTCIEEFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIK 625
EE KS WV+PALRQI+ IC L+ E QN P R+ + R II+ L
Sbjct: 598 DKFTEELKSG-NWVIPALRQIQGICLLFNEAPQNY----PNMHRTQHFSYRPEIINRLQD 652
Query: 626 NHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY 665
HS++ L+ NL + ++ + + N +++ G Y
Sbjct: 653 KHSMVTLVAVNLSNYVEFARTYAQENPRYRPSEIRNGSRY 692
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 85/148 (57%), Gaps = 11/148 (7%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKR-SLLLDNADLIGAEYLWRVITNAGEDIAF 739
QLT+SG+ CFE+FFK+VN E KL+ K S ++D DLIG Y+WRV+ N +DIA
Sbjct: 775 QLTQSGMFCFERFFKTVNCHEKKLLPKHHSSGSFMMDALDLIGVPYMWRVVMNGKDDIAT 834
Query: 740 RAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGL--------SHTYRPI 791
+AI LL+E+ T+LGP LQ + H+ FI CL+RLR +D + L + I
Sbjct: 835 KAIQLLQEIYTNLGPNLQVNQGSIHEDFIQSCLERLRVSFDNVNLLVGDNDATLDSSNDI 894
Query: 792 LPEARQIWTALA--QEAIFHCDREACFK 817
E R++ L E I CD E F+
Sbjct: 895 NNEIRRMTRVLTVLSEYITKCDEECSFE 922
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 44/55 (80%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A QIWT LA+ +++ D+EACF+WFSKLM +EPDLDP + K+FFE +L F+P
Sbjct: 719 PQACQIWTCLAENSVYQSDQEACFQWFSKLMGEEPDLDPNINKEFFETKILQFDP 773
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 36/44 (81%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPH-RHP--EEEWLTPDR 680
LL+ISSFNGKMNALNEVNKVI V+YYPH RH EE W+T ++
Sbjct: 387 LLKISSFNGKMNALNEVNKVIHSVSYYPHSRHSLDEEVWITAEK 430
>gi|357608719|gb|EHJ66111.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X [Danaus
plexippus]
Length = 1889
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 312/633 (49%), Positives = 431/633 (68%), Gaps = 40/633 (6%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L+ KIS RWVVPVLPEQELE L+ AA EL DV++ CQ F+ + L++
Sbjct: 17 FPEAKLKALEEKISHPRWVVPVLPEQELEALLIAATELATRGEDVNNLACQHFYTDSLTV 76
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTDDAV SWK NI C+ +NC+KL++L +KL F L +L M FNP NKFHT
Sbjct: 77 SFTKILTDDAVSSWKNNIQQCVRSNCEKLVKLCAMKLDDPRF--LHLLYMAFNPNNKFHT 134
Query: 155 FNSNQQSISVPV-NSNIA------DDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILL 207
FN+++ + V NS A + E+FA+ D ++ RGWLV LIN+FG GGF L
Sbjct: 135 FNASRTCEGLSVTNSTTAGQGSTQETEVFAKSQD-HRTPRGWLVHLINVFGQAGGFVKLR 193
Query: 208 ERFQ-----NKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEE 262
ERF+ KS LT I + + ++ E I + + ++T E
Sbjct: 194 ERFEMIMGFKKSDLTSSAI-SEEKVINEITEKENEENKSNVTESITSLPDNLEGSMTRSE 252
Query: 263 ----LKKEAKNESKNDAISVIIKSCKLLAARV-PHQEDT------EIVPEILENLTDEEL 311
L++ E+ +A+ +++ L + PH E +P +LE+LTDEEL
Sbjct: 253 QPSSLEQSTSGETCVNAVWQLLRPLGLCHELLTPHTVTVYLLPVLECIPTLLESLTDEEL 312
Query: 312 KKEAK-NESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMN 370
K+EA+ +E+K D +S +I++CK ++ + P +K LE+FRLK+ILRLLQ+SSFNGKM+
Sbjct: 313 KREARGSENKTDTVSCLIRACKCVSLKTPQHHSLLKSLEMFRLKMILRLLQMSSFNGKMS 372
Query: 371 ALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKI 430
ALNE+N++I+ ++ + P+ EWLTP + WI++N V++IVLRDSLHQPQYVE+LEK+
Sbjct: 373 ALNEINQLISTIS----QQPKPEWLTPTVITNWIRENKVVDIVLRDSLHQPQYVERLEKM 428
Query: 431 LRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASW 490
LRF+IKE +L+ DLDA+W AQ GKH+AIVKN+H+LLAKLAWDF+P QLDHLF CF+ASW
Sbjct: 429 LRFMIKENSLTRDDLDAIWRAQHGKHEAIVKNLHDLLAKLAWDFTPDQLDHLFDCFKASW 488
Query: 491 TSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKIL 550
++++KQ++KLLE+IRRLAEDDKDGVMA+KVL LFW+LAHSD+V T+IM+ ALA+ +KIL
Sbjct: 489 ATSSKKQSDKLLEVIRRLAEDDKDGVMANKVLVLFWNLAHSDEVCTEIMDVALANLIKIL 548
Query: 551 DYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRS 610
DYSCSQ+RD QK +WL C+EE KSN KWV+PAL+ +++ICCLY+ G +R
Sbjct: 549 DYSCSQDRDAQKILWLDKCVEELKSNDKWVLPALKMMREICCLYDAG------GGAGARP 602
Query: 611 HSSNNRQSIIDILIKNHSLIMLITNNLCSLLQI 643
H + RQ +ID L HSL++L+T++L + +
Sbjct: 603 HVT--RQELIDRLQTQHSLVILVTDSLTHYMNV 633
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LT SG+KCFE+FFK+VN EGKL K K+RS L+++ADLIG +YLWRVIT ++I+ R
Sbjct: 739 LTHSGIKCFERFFKAVNSKEGKL--KAKRRSFLINDADLIGLDYLWRVITECDDEISARG 796
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTA 801
I+LL+EV T GP+L S H+ F+ C R + + ++ A
Sbjct: 797 IELLREVCTCTGPQL--SAAHHHEAFLTHCCARTQRLQKDMDTQDDVSECCTRMCRVIRA 854
Query: 802 LAQEAIFHCDR 812
+ QE I CDR
Sbjct: 855 I-QEYINECDR 864
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A+QIW LA+ DREACF+WFSKLM +EPDLDP + FF ++++ P
Sbjct: 683 QAKQIWICLAERPAHLGDREACFRWFSKLMGEEPDLDPNINLHFFRRNIMTLSP 736
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 32/172 (18%)
Query: 606 LSSRSHSSNNRQSIIDILIK-----------NHSLI----MLITNNLCSLLQISSFNGKM 650
L + S N+ + LI+ +HSL+ M + LLQ+SSFNGKM
Sbjct: 312 LKREARGSENKTDTVSCLIRACKCVSLKTPQHHSLLKSLEMFRLKMILRLLQMSSFNGKM 371
Query: 651 NALNEVNKVIAGVAYYPHRHPEEEWLTP--------DRQLTESGLKCFEKFFKSVNIGEG 702
+ALNE+N++I+ ++ + P+ EWLTP + ++ + L+ + V E
Sbjct: 372 SALNEINQLISTIS----QQPKPEWLTPTVITNWIRENKVVDIVLRDSLHQPQYVERLEK 427
Query: 703 KLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRAIDLLKEVSTHLGP 754
L +K+ SL D+ D I WR E I DLL +++ P
Sbjct: 428 MLRFMIKENSLTRDDLDAI-----WRAQHGKHEAIVKNLHDLLAKLAWDFTP 474
>gi|119579810|gb|EAW59406.1| ubiquitin specific peptidase 9, X-linked, isoform CRA_a [Homo
sapiens]
Length = 2395
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 298/503 (59%), Positives = 366/503 (72%), Gaps = 57/503 (11%)
Query: 144 MVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGF 203
M NP KFH +N + SV + + +DE+FAR D ++ +GWLVDL+N FG++ GF
Sbjct: 1 MALNPHCKFHIYNGTRPCESVSSSVQLPEDELFARSPDP-RSPKGWLVDLLNKFGTLNGF 59
Query: 204 QILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEEL 263
QIL +RF N S L + +I ALI+PFGQ +E+LTL T+ KYF+PI+E
Sbjct: 60 QILHDRFINGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIE-------------- 105
Query: 264 KKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDA 323
+VP+ LENLTDEELKKEAKNE+KNDA
Sbjct: 106 ----------------------------------MVPQFLENLTDEELKKEAKNEAKNDA 131
Query: 324 ISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVA 383
+S+IIKS K LA+RVP QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+
Sbjct: 132 LSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVS 191
Query: 384 YYPHRHP---EEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKAL 440
YY HRH EEEWLT +RMA+WI+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL
Sbjct: 192 YYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKAL 251
Query: 441 SLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEK 500
+L DLD +WAAQAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EK
Sbjct: 252 TLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREK 311
Query: 501 LLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDK 560
LLELIRRLAEDDKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD
Sbjct: 312 LLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDT 371
Query: 561 QKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSI 619
QK W+ IEE ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +
Sbjct: 372 QKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDL 427
Query: 620 IDILIKNHSLIMLITNNLCSLLQ 642
I+ L NH+L+ L+ NL + ++
Sbjct: 428 INQLQHNHALVTLVAENLATYME 450
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 557 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 614
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 615 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 655
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 500 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 554
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 167 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 210
>gi|119579811|gb|EAW59407.1| ubiquitin specific peptidase 9, X-linked, isoform CRA_b [Homo
sapiens]
gi|119579812|gb|EAW59408.1| ubiquitin specific peptidase 9, X-linked, isoform CRA_b [Homo
sapiens]
Length = 2379
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 298/503 (59%), Positives = 366/503 (72%), Gaps = 57/503 (11%)
Query: 144 MVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGF 203
M NP KFH +N + SV + + +DE+FAR D ++ +GWLVDL+N FG++ GF
Sbjct: 1 MALNPHCKFHIYNGTRPCESVSSSVQLPEDELFARSPDP-RSPKGWLVDLLNKFGTLNGF 59
Query: 204 QILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEEL 263
QIL +RF N S L + +I ALI+PFGQ +E+LTL T+ KYF+PI+E
Sbjct: 60 QILHDRFINGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIE-------------- 105
Query: 264 KKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDA 323
+VP+ LENLTDEELKKEAKNE+KNDA
Sbjct: 106 ----------------------------------MVPQFLENLTDEELKKEAKNEAKNDA 131
Query: 324 ISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVA 383
+S+IIKS K LA+RVP QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+
Sbjct: 132 LSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVS 191
Query: 384 YYPHRHP---EEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKAL 440
YY HRH EEEWLT +RMA+WI+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL
Sbjct: 192 YYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKEKAL 251
Query: 441 SLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEK 500
+L DLD +WAAQAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EK
Sbjct: 252 TLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREK 311
Query: 501 LLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDK 560
LLELIRRLAEDDKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+RD
Sbjct: 312 LLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDT 371
Query: 561 QKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSI 619
QK W+ IEE ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +
Sbjct: 372 QKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYRHDL 427
Query: 620 IDILIKNHSLIMLITNNLCSLLQ 642
I+ L NH+L+ L+ NL + ++
Sbjct: 428 INQLQHNHALVTLVAENLATYME 450
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 557 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 614
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 615 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 655
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 500 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 554
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 167 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 210
>gi|351706181|gb|EHB09100.1| Putative ubiquitin carboxyl-terminal hydrolase FAF-Y
[Heterocephalus glaber]
Length = 2447
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/582 (52%), Positives = 393/582 (67%), Gaps = 70/582 (12%)
Query: 2 PPPQPGTSSDKDISQS---SSHRKEGTSCGPGC-----TCKFPVEKLAILDSKISSSRWV 53
PP QP +S D S + H ++G P FP LA LD I+S R +
Sbjct: 26 PPFQPNQTSSPDFSNENFPAPHPEQGQGDAPTQHEDEEEPAFPHNDLARLDDMINSPRGM 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPV P+ ELE L++A+++L K DV SE CQRFFR+GL++SFTKIL D+AV WK+ IH
Sbjct: 86 VPVWPKGELEVLLEASVDLSKKGLDVKSEACQRFFRDGLTVSFTKILLDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP +FH +N + + + ++ +D
Sbjct: 146 RCIINNTHRLIELCVAKLSQDWFPLLELLAMALNPRCRFHIYNDMRPCELLSSSIHLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FA + ++ +GWLVDLIN FG++ GFQIL +RF N S L I +I ALI+PFGQ +E
Sbjct: 206 ELFACSPNV-RSPKGWLVDLINRFGTLNGFQILHDRFINGSGLNIQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+L+ T+ KYF+P++E
Sbjct: 265 FLSQHTLKKYFIPVIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
IVP++LE L+DEELK NE+K+DA+S+IIKS K LA+++ QE+T+K LE+FRL
Sbjct: 281 ----IVPQLLEKLSDEELK----NEAKSDALSMIIKSLKNLASKISGQEETIKTLEMFRL 332
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRH---PEEEWLTPDRMAKWIKDNNVL 410
K+I RLLQISSFNGKMNALNE+NKVI+ +YY H + EEEWLT +RMA+WI+ N++L
Sbjct: 333 KMIRRLLQISSFNGKMNALNEINKVISTTSYYTHHNHNCEEEEWLTAERMAEWIQQNSIL 392
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVL+DSLH PQYVEKL KILRFLIKE+AL+L DLD +WAAQAGKH+AIVKNVH+LLA+L
Sbjct: 393 SIVLKDSLHHPQYVEKLVKILRFLIKERALTLQDLDHIWAAQAGKHEAIVKNVHDLLAQL 452
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+AN+KQ EKLLELI RLAED+K GVM KVLNL W+LA
Sbjct: 453 AWDFSPEQLDHLFDCFKASWTNANKKQREKLLELICRLAEDNKGGVMVHKVLNLLWNLAR 512
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEE 572
SDDV DIM+ AL++H+KILDY SQ K IW C+ E
Sbjct: 513 SDDVPVDIMDVALSAHIKILDYRHSQ----AKQIW--KCLAE 548
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN E KL+ K+R+ ++D+ LIG +YLWRV+ + +D+A RA
Sbjct: 594 LTENGIKCFERFFKAVNCKEQKLI--PKRRAYMMDDLQLIGLDYLWRVVIQSNDDVACRA 651
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ+S HK FI C +RLRA YD++
Sbjct: 652 IDLLKEIYTNLGPRLQTSQVVIHKDFIQSCFNRLRASYDSL 692
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 123/264 (46%), Gaps = 66/264 (25%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH---PEEEWLTPDRQ------------LTE 684
LLQISSFNGKMNALNE+NKVI+ +YY H + EEEWLT +R + +
Sbjct: 338 LLQISSFNGKMNALNEINKVISTTSYYTHHNHNCEEEEWLTAERMAEWIQQNSILSIVLK 397
Query: 685 SGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWR---VITNAGEDIAFRA 741
L + K V I L +K+R+L L + D I A + ++ N + +A A
Sbjct: 398 DSLHHPQYVEKLVKI----LRFLIKERALTLQDLDHIWAAQAGKHEAIVKNVHDLLAQLA 453
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLD---------------------------- 773
D E HL ++S T +K + L+
Sbjct: 454 WDFSPEQLDHLFDCFKASWTNANKKQREKLLELICRLAEDNKGGVMVHKVLNLLWNLARS 513
Query: 774 ----------RLRAHYDTIGLSHTYRPILPEARQIWTALAQEAIFHCDREACFKWFSKLM 823
L AH + H+ +A+QIW LA+ A++ DREACFKW+SKLM
Sbjct: 514 DDVPVDIMDVALSAHIKILDYRHS------QAKQIWKCLAENAVYLSDREACFKWYSKLM 567
Query: 824 TDEPDLDPKMMKDFFEKHVLHFEP 847
D DLDP ++KDFFE +VL +P
Sbjct: 568 GDGSDLDPDIIKDFFESNVLQLDP 591
>gi|158299145|ref|XP_319246.4| AGAP010088-PA [Anopheles gambiae str. PEST]
gi|157014228|gb|EAA14582.5| AGAP010088-PA [Anopheles gambiae str. PEST]
Length = 2486
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/642 (49%), Positives = 400/642 (62%), Gaps = 97/642 (15%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FPV+KLA L++KIS+SRWVVPVLP QEL+CL+ AAI+L D D E C RF++ L+
Sbjct: 5 FPVDKLASLNAKISNSRWVVPVLPSQELDCLLDAAIQLSTLGIDGDCESCVRFYQNELAT 64
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF ILTD+AV SWK NIH CI+ +C K L L L + +D LL++L +VF+P NKFH
Sbjct: 65 SFINILTDEAVMSWKNNIHVCIFKSCCKFLLLASLHMERDNQSLLELLAIVFDPENKFHM 124
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYY--------KNQRGWLVDLINLFGSMGGFQIL 206
N +Q P N N KN RGWL++ IN FG GF+
Sbjct: 125 HNIARQ----PENINTPPPPPPPPAPPATFAKPPVETKNPRGWLLNFINQFGVYNGFENF 180
Query: 207 LERF--------------------------QNKSTLTIPVIFALIRPFGQVHEYLTLPTI 240
L+R + +++ +++AL+RPFG EYLT+ TI
Sbjct: 181 LKRMTVAIEQHQRVSASEEKTEGGRGGGGEKCDGKISLQLLYALLRPFGLCAEYLTVDTI 240
Query: 241 LKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVP 300
+Y +P C+ V
Sbjct: 241 ERYLLP-----------------------------------GCRF-------------VL 252
Query: 301 EILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLL 360
+LE+L+D ELK+E E KND I+ I+K + L RVP QE + +LE+ RLKIILR+L
Sbjct: 253 TVLESLSDVELKREVVFEGKNDFITGIVKFARALLTRVPGQESLLNELEMARLKIILRVL 312
Query: 361 QISSFNGKMNALNEVNKVIAGVAYYPHR----HPEEEWLTPDRMAKWIKDNNVLEIVLRD 416
QISSFNGKMNALNE+N+V++ V+ YP+R E ++L+ +RMA WI++N VL IVLRD
Sbjct: 313 QISSFNGKMNALNEINRVLSYVSIYPNRGLIAEEEGDFLSANRMAMWIRNNRVLTIVLRD 372
Query: 417 SLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSP 476
SLHQ QYVEKLEKILRFLIKEKAL+ DLDAVW AQ GKH+AI KNVH+LLAKLAWDFS
Sbjct: 373 SLHQSQYVEKLEKILRFLIKEKALTFDDLDAVWNAQEGKHEAIAKNVHDLLAKLAWDFSA 432
Query: 477 VQLDHLFVCFQASWT-SANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVM 535
QLD+LF CFQ S SA+RKQ E+LLEL RRLAEDDK+G+MA KVLN+FW+LAHS D
Sbjct: 433 DQLDYLFRCFQTSMQKSASRKQRERLLELNRRLAEDDKNGMMAQKVLNMFWNLAHSSDTP 492
Query: 536 TDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYE 595
+++EQAL SH+KILDYSCSQERD QK+IWL C+EE K +WV+PALR I+DIC LY+
Sbjct: 493 LEVLEQALQSHVKILDYSCSQERDAQKSIWLVKCVEELKGRDEWVLPALRLIRDICSLYD 552
Query: 596 PGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNL 637
N H P R + NRQ IID L +H L++L+TN+L
Sbjct: 553 TTPN---HTP---RIQHTMNRQKIIDQLQNDHKLVILVTNSL 588
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 72/105 (68%), Gaps = 5/105 (4%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKV---KKRSLLLDNA-DLIGAEYLWRVITNAGEDI 737
L+E+G++CFE+FF++VN E ++V + +L +N DLIG +YLWRVIT E I
Sbjct: 700 LSENGIRCFERFFRAVNTKEERIVSAKHHHRNAYVLYNNGEDLIGKDYLWRVITAGQEPI 759
Query: 738 AFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
A RAI++L E+ T +GP+ S + +H++FI EC ++LRA + ++
Sbjct: 760 AHRAINILNEMMT-VGPRQLSEMKAYHESFIEECCEKLRAMFQSM 803
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPI 848
+A+QIW +LA A F DRE CF+WFSKLM + PDLDP + +DFFE ++L +PI
Sbjct: 644 QAKQIWNSLAVNAAFESDREECFRWFSKLMGENPDLDPGINRDFFENNLLKLDPI 698
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 23/125 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH--PEEE-----------WLTPDRQLTESG 686
+LQISSFNGKMNALNE+N+V++ V+ YP+R EEE W+ +R LT
Sbjct: 311 VLQISSFNGKMNALNEINRVLSYVSIYPNRGLIAEEEGDFLSANRMAMWIRNNRVLT--- 367
Query: 687 LKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRAIDL 744
+ + +S + + + +L+ +K+++L D+ D + W E IA DL
Sbjct: 368 IVLRDSLHQSQYVEKLEKILRFLIKEKALTFDDLDAV-----WNAQEGKHEAIAKNVHDL 422
Query: 745 LKEVS 749
L +++
Sbjct: 423 LAKLA 427
>gi|402909908|ref|XP_003917643.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like, partial [Papio anubis]
Length = 536
Score = 550 bits (1418), Expect = e-153, Method: Compositional matrix adjust.
Identities = 285/474 (60%), Positives = 348/474 (73%), Gaps = 56/474 (11%)
Query: 173 DEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVH 232
D + A + + + GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +
Sbjct: 108 DMLLASQLLFCASCMGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCY 167
Query: 233 EYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPH 292
E+LTL T+ KYF+PI+E
Sbjct: 168 EFLTLHTVKKYFLPIIE------------------------------------------- 184
Query: 293 QEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFR 352
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFR
Sbjct: 185 -----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFR 239
Query: 353 LKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRH---PEEEWLTPDRMAKWIKDNNV 409
LK+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+
Sbjct: 240 LKMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNI 299
Query: 410 LEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAK 469
L IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAK
Sbjct: 300 LSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAK 359
Query: 470 LAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLA 529
LAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LA
Sbjct: 360 LAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLA 419
Query: 530 HSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKD 589
HSDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++
Sbjct: 420 HSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIRE 479
Query: 590 ICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
IC L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 480 ICSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 529
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 38/47 (80%), Gaps = 3/47 (6%)
Query: 637 LCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRH---PEEEWLTPDR 680
+ LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 243 ILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 289
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTN 76
VPVLP+ ELE L++AAI+L K +
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKD 108
>gi|431898764|gb|ELK07136.1| Putative ubiquitin carboxyl-terminal hydrolase FAF-X [Pteropus
alecto]
Length = 2280
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 292/503 (58%), Positives = 358/503 (71%), Gaps = 57/503 (11%)
Query: 188 GWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPI 247
GWLVDL+N FGS+ GFQIL +RF N S L + +I ALI+PFGQ +E+LTL T+ KYF+P+
Sbjct: 146 GWLVDLLNKFGSLNGFQILHDRFINGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPV 205
Query: 248 LEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLT 307
+E +VP+ LENLT
Sbjct: 206 IE------------------------------------------------MVPQFLENLT 217
Query: 308 DEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNG 367
DEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRLK+ILRLLQISSFNG
Sbjct: 218 DEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNG 277
Query: 368 KMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYV 424
KMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L IVLRDSLHQPQYV
Sbjct: 278 KMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYV 337
Query: 425 EKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFV 484
EKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF
Sbjct: 338 EKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFD 397
Query: 485 CFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALA 544
CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAHSDDV DIM+ AL+
Sbjct: 398 CFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALS 457
Query: 545 SHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLY-EPGQNLNSH 603
+H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++IC L+ E QNL+
Sbjct: 458 AHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQ- 516
Query: 604 APLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGV 663
+ RS R +I+ L NH+L+ L+ NL + ++ + + + + V G
Sbjct: 517 ---TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYMESMRLHARDHEDYDPQTVRLG- 572
Query: 664 AYYPHRHPEEEWLTPDRQLTESG 686
+ Y H +E L R L + G
Sbjct: 573 SRYSHVQEVQERLNFLRFLLKDG 595
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 659 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 716
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 717 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 757
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 78/131 (59%), Gaps = 8/131 (6%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+I
Sbjct: 67 FPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTI 126
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVF--------PLLDILTMVF 146
SFTKILTD+AV WK+ IH + + K L ++ D F ++ L F
Sbjct: 127 SFTKILTDEAVSGWKFEIHGWLVDLLNKFGSLNGFQILHDRFINGSALNVQIIAALIKPF 186
Query: 147 NPCNKFHTFNS 157
C +F T ++
Sbjct: 187 GQCYEFLTLHT 197
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 602 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 656
>gi|312385287|gb|EFR29826.1| hypothetical protein AND_00945 [Anopheles darlingi]
Length = 2101
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 324/736 (44%), Positives = 414/736 (56%), Gaps = 149/736 (20%)
Query: 5 QPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELEC 64
Q T+ D + +++ G S P FP+EKLA L++KIS+SRWVVPVLP QEL+C
Sbjct: 12 QESTAEPNDNAHNTNSNSTG-STKPALIASFPIEKLASLNAKISNSRWVVPVLPSQELDC 70
Query: 65 LIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNC---- 120
L+ AAI+L D + EPC RF+ L+ SF ILTD+AV SWK NIH CI+ +C
Sbjct: 71 LLDAAIQLSVAGIDGECEPCVRFYHNELATSFINILTDEAVMSWKNNIHVCIFKSCCKFL 130
Query: 121 -----------QKLLELIVL-----------KLGQDVFPLLDILT---MVFNPCNKFH-- 153
Q LLEL+ + + + P+L T + NP
Sbjct: 131 RLAALHMERDNQPLLELLAMVFDSENKFHLHNISRQPEPMLTAQTAANTLANPATASSSS 190
Query: 154 -------------------------TFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRG 188
T +++ I P A +PI+ KN RG
Sbjct: 191 SSSSSSSSSSLPDSSDNSSGGGATTTSSNSAPGIVSPKQQEEAIVSFAKQPIET-KNPRG 249
Query: 189 WLVDLINLFGSMGGFQILLERF-------------------------QNKSTLTIPVIFA 223
WL++LIN FG GF LL+R + + +++P+++A
Sbjct: 250 WLLNLINHFGMYHGFDNLLKRLTVAIEQQQRHSTEPESTGGGDANGVKRRGKMSLPLLYA 309
Query: 224 LIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSC 283
L+RPFG EYL TI +Y +P C
Sbjct: 310 LLRPFGLCAEYLATETIERYLLP-----------------------------------GC 334
Query: 284 KLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQED 343
+ V +LE LTD ELK+E E KND I+ I+K + L VP QE
Sbjct: 335 RF-------------VLSVLEGLTDVELKREVVFEGKNDFITGIVKFSRALLTLVPGQES 381
Query: 344 TVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRH--PEEE---WLTPD 398
+ +LE+ RLKIILR+LQI SFNGKMNALNE+N+V++ V+ YPHR EEE +L+
Sbjct: 382 LLNELEMARLKIILRVLQILSFNGKMNALNEINRVLSYVSIYPHRGLIAEEEGGDFLSAG 441
Query: 399 RMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDA 458
+MA+WI+ N VL IVL DSLHQ QYVEKLEKILRFLIKEKALS DLDAVW AQ GKH+A
Sbjct: 442 KMAQWIRSNRVLAIVLNDSLHQSQYVEKLEKILRFLIKEKALSFDDLDAVWNAQEGKHEA 501
Query: 459 IVKNVHELLAKLAWDFSPVQLDHLFVCFQASWT-SANRKQTEKLLELIRRLAEDDKDGVM 517
I KNVH+LLAKLAWDFS QLDHLF CFQ S S N+KQ E+LLEL RRLAEDDK+G+M
Sbjct: 502 IAKNVHDLLAKLAWDFSADQLDHLFRCFQTSMQRSGNKKQRERLLELNRRLAEDDKNGMM 561
Query: 518 ADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNP 577
A KVLN+FW+LAHS D +++EQAL SH+KILDYSCSQERD QK IWL C+EE K
Sbjct: 562 AQKVLNMFWNLAHSPDTPLEVLEQALQSHVKILDYSCSQERDAQKGIWLVKCVEELKGRD 621
Query: 578 KWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNL 637
+WV+PALR I+DIC LY+ N H P R H + NRQ IID L +H L++L+TN+L
Sbjct: 622 EWVLPALRLIRDICSLYDTTPN---HTP---RMHHTMNRQKIIDQLQNDHKLVILVTNSL 675
Query: 638 CSLLQISSFNGKMNAL 653
+ + G++ AL
Sbjct: 676 ------TGYMGRVRAL 685
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 683 TESGLKCFEKFFKSVNIGEGKLVLKVKK------RSLLLDNADLIGAEYLWRVITNAGED 736
TESG+KCFE+FF++VN E +L+ K + +LIG +YLWRVIT A E
Sbjct: 788 TESGVKCFERFFRAVNTKEDRLMSMAKVHHHRGIKGGYSYGEELIGKDYLWRVITTAAEP 847
Query: 737 IAFRAIDLLKEVSTHLGPKLQ-SSLTQFHKTFIAECLDRLRAHYDTIGL 784
IA RAI +L ++ T +GP+ + + ++H+ FI EC ++LRA Y +I L
Sbjct: 848 IANRAIGILNDMVTAIGPRTTVADVQEYHEAFIEECCEKLRATYQSIEL 896
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKH 841
+A+QIW ALA A F DRE CF+WFSKLM + PDLDP + +DFFE +
Sbjct: 731 QAKQIWNALAVSAAFASDREECFRWFSKLMGENPDLDPGINRDFFENN 778
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 24/126 (19%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH--PEEE------------WLTPDRQLTES 685
+LQI SFNGKMNALNE+N+V++ V+ YPHR EEE W+ +R L
Sbjct: 397 VLQILSFNGKMNALNEINRVLSYVSIYPHRGLIAEEEGGDFLSAGKMAQWIRSNRVL--- 453
Query: 686 GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRAID 743
+ + +S + + + +L+ +K+++L D+ D + W E IA D
Sbjct: 454 AIVLNDSLHQSQYVEKLEKILRFLIKEKALSFDDLDAV-----WNAQEGKHEAIAKNVHD 508
Query: 744 LLKEVS 749
LL +++
Sbjct: 509 LLAKLA 514
>gi|391348563|ref|XP_003748516.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
[Metaseiulus occidentalis]
Length = 2407
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 301/668 (45%), Positives = 413/668 (61%), Gaps = 94/668 (14%)
Query: 5 QPGTSSDKDISQSSSHRKEGTSCGPGCTCK-------------FPVEKLAILDSKISSSR 51
+ GTS+ ++ S + H E S C K FP E+L L+ I+ SR
Sbjct: 23 EGGTSTTQETSGETPH--EQPSPDGSCPTKEENSEDVDNNDTSFPEEELGKLEGMINRSR 80
Query: 52 WVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYN 111
WVVPVLP ELE L+KA + L K D ++E C+RF R+GL SFTKILTD+AV WK+
Sbjct: 81 WVVPVLPNGELEVLLKATLRLAKRGLDEENEMCKRFIRDGLITSFTKILTDEAVSGWKFE 140
Query: 112 IHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIA 171
IH CIY+NC+ L+EL V+KL Q+ PL+D+L +VFNP NKFH +N+++ S + +
Sbjct: 141 IHKCIYHNCELLIELCVVKLEQNCQPLMDMLALVFNPENKFHQYNASRVMDSQEMPYAKS 200
Query: 172 DDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS---TLTIPVIFALIRPF 228
+D ++ +GWLV+LIN FG +GGF+ILL++F++ S T + VI +LI+PF
Sbjct: 201 NDS---------RSPKGWLVNLINKFGHLGGFEILLKKFKDMSPERTAPLNVIVSLIKPF 251
Query: 229 GQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAA 288
G LT T+ +Y MPI ++K
Sbjct: 252 GLSCLLLTERTLTRYLMPI-------------------------------VVK------- 273
Query: 289 RVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQL 348
VP + NL+DE+LKK+ +KND +S+++K + +A H V L
Sbjct: 274 ----------VPSYIWNLSDEQLKKD----TKNDCLSLLVKWLRCIALCTAHTY-VVADL 318
Query: 349 EIFRLKIILRLLQISSFNGKMNALNEVNKVI--------AGVAYYPHRHPEEEWLTPDRM 400
E FRL+++ RLL ISSFNGKMNALNEVNK I +G A E ++LT +
Sbjct: 319 EKFRLEMLHRLLLISSFNGKMNALNEVNKTITNAMSGRQSGHALRCPDGSESDYLTSRDI 378
Query: 401 AKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAG--KHDA 458
+WIK N+L IVLRDSLHQPQYVEKLEKILRF+IKEKAL DLDA+W +Q+G +H+A
Sbjct: 379 IQWIKSANILSIVLRDSLHQPQYVEKLEKILRFMIKEKALQSDDLDAIWQSQSGATRHEA 438
Query: 459 IVKNVHELLAKLAWDFSPVQLDHLF-VCFQASW-TSANRKQTEKLLELIRRLAEDDKDGV 516
IVKN+H+LLAKLAWDFSP QL+++F CF+ SW T++ +K+ E+L+ELIRRLAEDDKDG+
Sbjct: 439 IVKNIHDLLAKLAWDFSPDQLEYVFESCFKKSWATASTKKERERLIELIRRLAEDDKDGM 498
Query: 517 MADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSN 576
MA KVL L W LAH+ +V +I++ ALA+HLKILDYSC Q+R QK WL+ C++E K N
Sbjct: 499 MAHKVLQLLWGLAHNQEVPNEIVDLALAAHLKILDYSCCQDRSAQKQHWLEECVKELKIN 558
Query: 577 PKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNN 636
K+V+PAL+ I+DIC LY+ +N + L+ + R II L H+L++L+T N
Sbjct: 559 DKFVIPALKHIRDICMLYQ--ENQQTQHGLARGGNQGPARSDIISTLQNKHTLVVLVTTN 616
Query: 637 LCSLLQIS 644
L ++ S
Sbjct: 617 LVEYVEES 624
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 74/107 (69%), Gaps = 6/107 (5%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLV-LKVKKRS-----LLLDNADLIGAEYLWRVITNAG 734
QLT+SG+ CFE+FFK VN+ +G L+ +K S + +DN +L+G +YLW+V+ +
Sbjct: 726 QLTDSGIHCFERFFKMVNVKDGNLITMKTMTSSTHAGVVYVDNVELVGLDYLWKVVLLSS 785
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDT 781
+D++ +A ++L+ +T+LGPKLQ S FH+ F++ C +R+R YDT
Sbjct: 786 DDVSAKAAEILRTTATNLGPKLQESRMDFHEDFVSTCFERIRIAYDT 832
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A QIW LA+ + DREACF WF+KLM DEPDLDP + K FFE ++L F+P
Sbjct: 670 PQATQIWKCLAENGAYPSDREACFNWFAKLMGDEPDLDPDINKQFFENNILKFDP 724
Score = 40.0 bits (92), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/24 (79%), Positives = 19/24 (79%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGV 663
LL ISSFNGKMNALNEVNK I
Sbjct: 329 LLLISSFNGKMNALNEVNKTITNA 352
>gi|351711657|gb|EHB14576.1| Putative ubiquitin carboxyl-terminal hydrolase FAF-X
[Heterocephalus glaber]
Length = 884
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 239/390 (61%), Positives = 290/390 (74%), Gaps = 51/390 (13%)
Query: 205 ILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELK 264
IL +RF N S L + +I ALI+PFGQ +E+LTL + KYF+PI+E
Sbjct: 137 ILHDRFINGSALNVQIIAALIKPFGQCYEFLTLHIVKKYFLPIIE--------------- 181
Query: 265 KEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAI 324
+VP+ LE LTDEELKKEAKNE+KNDA+
Sbjct: 182 ---------------------------------MVPQFLEKLTDEELKKEAKNETKNDAL 208
Query: 325 SVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAY 384
S+IIKS LA+RV QE+TVK LEIFRLK+ILRLLQISSFNGKMNALNEVNKVI+ V+
Sbjct: 209 SMIIKSLMNLASRVLGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVISSVSC 268
Query: 385 YPHRH---PEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALS 441
Y +H EEEWLT ++MA+WI+ NN+L IVL+DSLHQPQY EKLEKIL F+IKEKAL+
Sbjct: 269 YTQQHGNTEEEEWLTAEQMAEWIQQNNILSIVLQDSLHQPQYAEKLEKILSFVIKEKALT 328
Query: 442 LGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKL 501
L DLD +WAAQAGKH+AIVKNVH+LL KLAWDFSP QLDHLF CF+A+WT+A++KQ EKL
Sbjct: 329 LEDLDNIWAAQAGKHEAIVKNVHDLLPKLAWDFSPEQLDHLFYCFKANWTNASKKQHEKL 388
Query: 502 LELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQ 561
LELIRRL EDDKDGVMA KVLNL W+LAHSDD+ DIM+ AL++H+KILDYSCSQ+RD Q
Sbjct: 389 LELIRRLTEDDKDGVMAHKVLNLLWNLAHSDDMPVDIMDLALSAHIKILDYSCSQDRDIQ 448
Query: 562 KTIWLQTCIEEFKSNPKWVVPALRQIKDIC 591
K W+ IEE ++N KWV+PAL+Q+++IC
Sbjct: 449 KIQWINRFIEELRTNDKWVIPALKQVREIC 478
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I +WVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+I
Sbjct: 67 FPHTDLAKLDDMIDRPQWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTI 126
Query: 95 SFTKILTDDAV 105
SFTKILTD+A+
Sbjct: 127 SFTKILTDEAI 137
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 35/44 (79%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH---PEEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+ Y +H EEEWLT ++
Sbjct: 243 LLQISSFNGKMNALNEVNKVISSVSCYTQQHGNTEEEEWLTAEQ 286
>gi|47220139|emb|CAG07280.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1846
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/398 (56%), Positives = 281/398 (70%), Gaps = 52/398 (13%)
Query: 78 DVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP 137
DV E CQRFFR+GL+ISFTKILTD+AV WK+ IH CI NN +L+EL V KL QD FP
Sbjct: 251 DVKCEACQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFP 310
Query: 138 LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLF 197
LL++L M NP KFH +N + S SVP + +ADDE+FARP D ++ +GWLVDLIN F
Sbjct: 311 LLELLAMATNPHCKFHIYNGTRPSESVPAGAQLADDELFARPPDP-RSPKGWLVDLINKF 369
Query: 198 GSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILEN 257
G++ GFQIL +RF + L + +I ALI+PFGQ +E+LTL T+ KYF+P++E+VP+ LEN
Sbjct: 370 GTLNGFQILHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLEN 429
Query: 258 LTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKN 317
LTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+
Sbjct: 430 LTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEE---------------------- 467
Query: 318 ESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNK 377
TVK LEIFRLK+ILRLLQ+SSFNGKMNALNEVNK
Sbjct: 468 --------------------------TVKNLEIFRLKMILRLLQMSSFNGKMNALNEVNK 501
Query: 378 VIAGVAYYPHRH--PEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLI 435
VI+ V+YY HRH EEEWLT +RMA+WI+ N++L IVLRDSLHQPQYVEKLEKILRF+I
Sbjct: 502 VISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRFVI 561
Query: 436 KEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWD 473
KEKAL++ DLD +WAAQ H+ +++ + L K ++D
Sbjct: 562 KEKALTMQDLDNIWAAQVEIHEDFIQSCFDRL-KASYD 598
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 74/145 (51%), Gaps = 29/145 (20%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH--PEEEWLTPDRQLTESGLKCFEKFFKSV 697
LLQ+SSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R +
Sbjct: 483 LLQMSSFNGKMNALNEVNKVISSVSYYTHRHNPEEEEWLTAERM--------------AE 528
Query: 698 NIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRAIDLLKEVSTHLGPKLQ 757
I + ++ V + SL E L +++ ++ A DL +
Sbjct: 529 WIQQNHILSIVLRDSLHQPQY----VEKLEKILRFVIKEKALTMQDL---------DNIW 575
Query: 758 SSLTQFHKTFIAECLDRLRAHYDTI 782
++ + H+ FI C DRL+A YDT+
Sbjct: 576 AAQVEIHEDFIQSCFDRLKASYDTL 600
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDV 79
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K +
Sbjct: 131 FPHADLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGRNT 175
>gi|241652648|ref|XP_002411295.1| ubiquitin specific protease, putative [Ixodes scapularis]
gi|215503925|gb|EEC13419.1| ubiquitin specific protease, putative [Ixodes scapularis]
Length = 1324
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/379 (55%), Positives = 268/379 (70%), Gaps = 60/379 (15%)
Query: 148 PCNKFHTFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILL 207
PC +F ++ +++ + D+ + + + GWLVDLIN FGS+GGF +LL
Sbjct: 69 PCQRFF-----REGLTISFTKILTDEAVSGWKFEIH----GWLVDLINRFGSLGGFSLLL 119
Query: 208 ERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEA 267
ERF++ L++P++ ALIRP G H LT+ T+ ++ +P++ +
Sbjct: 120 ERFRSGRALSVPLMAALIRPLGLCHSLLTVSTVERFLLPLVSL----------------- 162
Query: 268 KNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVI 327
VP +LE LTD+ELK+EAKNE+KNDA+S I
Sbjct: 163 -------------------------------VPSLLERLTDDELKREAKNETKNDALSAI 191
Query: 328 IKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPH 387
+K+ + LAARVPHQEDTVK LE+FRL++ILRLLQISSFNGKMNALNEVNKVIA V+YY H
Sbjct: 192 VKALRCLAARVPHQEDTVKALEMFRLRMILRLLQISSFNGKMNALNEVNKVIANVSYYAH 251
Query: 388 RHP---EEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGD 444
RH EEEWLT +RMA+WIK+N VL+IVLRDSLHQPQYVEKLEK++RF+IKEKAL+L D
Sbjct: 252 RHAGIEEEEWLTAERMAEWIKENRVLQIVLRDSLHQPQYVEKLEKMVRFVIKEKALTLED 311
Query: 445 LDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLEL 504
LD +WAAQ+GKH+AIVKNVH+LLAKLAWDF+P QLDHLF CFQ+SW SA +KQ EKLLEL
Sbjct: 312 LDDLWAAQSGKHEAIVKNVHDLLAKLAWDFAPEQLDHLFDCFQSSWASATKKQREKLLEL 371
Query: 505 IRRLAEDDKDGVMADKVLN 523
IRRLAEDDKDGVMA K++
Sbjct: 372 IRRLAEDDKDGVMAHKLMG 390
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/155 (42%), Positives = 88/155 (56%), Gaps = 14/155 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FPV +LA LD I+ RWVVPVL + ELE L++AAI LCK DV SEPCQRFFREGL+I
Sbjct: 21 FPVAELARLDEMINRPRWVVPVLAKGELEVLLEAAIALCKEGRDVASEPCQRFFREGLTI 80
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVF--------PLLDILTMVF 146
SFTKILTD+AV WK+ IH + + + L L + F PL+ L
Sbjct: 81 SFTKILTDEAVSGWKFEIHGWLVDLINRFGSLGGFSLLLERFRSGRALSVPLMAALIRPL 140
Query: 147 NPCNKFHTFNSNQQ------SISVPVNSNIADDEI 175
C+ T ++ ++ S+ + + DDE+
Sbjct: 141 GLCHSLLTVSTVERFLLPLVSLVPSLLERLTDDEL 175
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV VK+R L++ +L+GA+YLW+V+ + +A RA
Sbjct: 416 LTENGIKCFERFFKAVNSKEGKLV--VKRRVYQLEDVELVGADYLWKVVLHGASPVADRA 473
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAEC 771
I+LL+EV T LGP+LQ S F C
Sbjct: 474 IELLREVYTSLGPRLQGSQVGSPSPFFVVC 503
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 113/231 (48%), Gaps = 39/231 (16%)
Query: 628 SLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR---- 680
+L M + LLQISSFNGKMNALNEVNKVIA V+YY HRH EEEWLT +R
Sbjct: 211 ALEMFRLRMILRLLQISSFNGKMNALNEVNKVIANVSYYAHRHAGIEEEEWLTAERMAEW 270
Query: 681 ----QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGED 736
++ + L+ + V E + +K+++L L++ D LW + E
Sbjct: 271 IKENRVLQIVLRDSLHQPQYVEKLEKMVRFVIKEKALTLEDLD-----DLWAAQSGKHEA 325
Query: 737 IAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEAR 796
I DLL +++ P E LD L + + S T + +
Sbjct: 326 IVKNVHDLLAKLAWDFAP---------------EQLDHLFDCFQSSWASATKKQ-REKLL 369
Query: 797 QIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
++ LA++ D++ KLM +EPDLDP++ +DFFE +VL EP
Sbjct: 370 ELIRRLAED-----DKDGVMA--HKLMGEEPDLDPEINQDFFENNVLQLEP 413
>gi|196011597|ref|XP_002115662.1| hypothetical protein TRIADDRAFT_59589 [Trichoplax adhaerens]
gi|190581950|gb|EDV22025.1| hypothetical protein TRIADDRAFT_59589 [Trichoplax adhaerens]
Length = 2373
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/422 (50%), Positives = 296/422 (70%), Gaps = 21/422 (4%)
Query: 278 VIIKSCKLLAARVPHQ-------EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKS 330
I K C+ L P + ED + ++L+ L+D+ELKKE+K+ESK+DAIS II++
Sbjct: 169 AIRKLCRFLNGNYPSELHDAYCGEDH--ITKLLDKLSDDELKKESKSESKSDAISSIIRA 226
Query: 331 CKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHR-- 388
K L+ RVP +E+ ++ +E+FRLKI+LRLLQ+SSFNGKM+ALNE+N++I V+Y HR
Sbjct: 227 LKNLSVRVPGKEEVIRTVELFRLKIVLRLLQMSSFNGKMSALNEMNRLIMNVSYITHRNT 286
Query: 389 ---HPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDL 445
+P+++WLT DR+A+WI+ N+VL +VLRD+LHQPQYVEKLEKILRF IKEKA++ DL
Sbjct: 287 GSSYPDDDWLTADRIAEWIQQNDVLNVVLRDNLHQPQYVEKLEKILRFAIKEKAVTFRDL 346
Query: 446 DAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
D +WAAQAGKH+AIVKNVH+LLAKLAWDFS QLD+LF CFQ SWT+A+ KQ EKL+ELI
Sbjct: 347 DLIWAAQAGKHEAIVKNVHDLLAKLAWDFSAQQLDYLFDCFQKSWTNASNKQREKLIELI 406
Query: 506 RRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIW 565
RRLAEDDK+G MA KVL L W+L H DV +IM+ AL++H+KILDY+CS +RD QKT W
Sbjct: 407 RRLAEDDKEGFMAQKVLELLWNLVHDRDVPIEIMDLALSAHIKILDYNCSPDRDVQKTNW 466
Query: 566 LQTCIEEFKSNPKWVVPALRQIKDICCL-YEPGQNLNSHAPLSSRSHSSNNRQSIIDILI 624
+ C+EE K + WV+PA++ I++IC L YE ++ + PLS + R +I+ L
Sbjct: 467 IDKCVEELKES-NWVIPAVKHIQEICQLFYEAPRDYSRSQPLSHLFY----RHEVINQLQ 521
Query: 625 KNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTE 684
+ H ++ + NL + + + + N + V+ ++Y H +E LT R
Sbjct: 522 QKHKIVSVTAENLSIYMNKARAHFQAFRENSTSDVMPA-SHYSHSQQVDERLTFLRYCLR 580
Query: 685 SG 686
G
Sbjct: 581 DG 582
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 14/119 (11%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTN-----SDVDSEPCQRFFR 89
FP+ +L L+ I+ +RWVVPVLP EL L++++I++ + + +D + CQRF +
Sbjct: 37 FPIAELNKLEEMINKTRWVVPVLPGGELLVLLESSIKIGQQSDIFECTDEAHQYCQRFIK 96
Query: 90 EGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNP 148
+GL SFTKIL DDA I N +KL+EL V+ QD+ PLLD+L + NP
Sbjct: 97 DGLVSSFTKILCDDA---------RSIVKNIEKLVELCVVTFHQDILPLLDLLAVAMNP 146
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G++CFE FF++VN G + + + + + +LIG +Y+WRV+ + ED+A +A
Sbjct: 646 LTENGVRCFELFFRAVN---GGTKINNETKPIYKHDQELIGVDYIWRVVLCSEEDVANKA 702
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRA 777
I+LLKE L P +Q+S FI C+ RL+
Sbjct: 703 IELLKETYITLNPDVQNSQVLADSEFIETCMKRLQV 738
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 792 LPEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
LPEA IW LA++ I DREACF WFS+++ D + P+ + FFEK++L F+P
Sbjct: 588 LPEAELIWFCLAEKGIHLSDREACFTWFSRILEDTTVMQPETCQKFFEKNILTFDP 643
>gi|395518714|ref|XP_003763504.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X
[Sarcophilus harrisii]
Length = 2462
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/411 (52%), Positives = 264/411 (64%), Gaps = 60/411 (14%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S ++P +A+D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPSETIPAGVQLAED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E++ARP D ++ +GWLVDLIN FG++ GFQIL +RF + S L + +I ALI+PFGQ +E
Sbjct: 206 ELYARPPD-PRSPKGWLVDLINKFGTLNGFQILHDRFISGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E+VP+ LENLTD+ELKKEAKNE+KNDA+S+IIKS K LA+RVP Q
Sbjct: 265 FLTLHTVKKYFLPIIEMVPQFLENLTDDELKKEAKNEAKNDALSMIIKSLKNLASRVPGQ 324
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
E+ TVK LEIFRL
Sbjct: 325 EE------------------------------------------------TVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMA 401
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMA 387
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/200 (50%), Positives = 133/200 (66%), Gaps = 6/200 (3%)
Query: 488 ASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHL 547
ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAHSDDV DIM+QAL++H+
Sbjct: 388 ASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHI 447
Query: 548 KILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPL 606
KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++IC L+ E QNL+
Sbjct: 448 KILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQ---- 503
Query: 607 SSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYY 666
+ RS R +I+ L NH+L+ L+ NL + ++ K + + V G + Y
Sbjct: 504 TQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMESMRQYAKEHGEYDPQTVRPG-SRY 562
Query: 667 PHRHPEEEWLTPDRQLTESG 686
H +E L R L + G
Sbjct: 563 SHVQEVQERLNFLRFLLKDG 582
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 77/101 (76%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 646 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGNDDIASRA 703
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 704 IDLLKEIYTNLGPRLQVNQVAIHEDFIQSCFDRLKASYDTL 744
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 589 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFENNVLQLDP 643
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>gi|358422921|ref|XP_003585533.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like, partial [Bos taurus]
Length = 386
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/370 (54%), Positives = 245/370 (66%), Gaps = 52/370 (14%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+I
Sbjct: 66 FPHADLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTI 125
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKIL D+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 126 SFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHV 185
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + SV ++ +DE+FA D ++ +GWLVDLIN FG + GFQIL +RF N S
Sbjct: 186 YNGTRPCESVSTSAQSPEDELFAHSSD-PRSPKGWLVDLINKFGILNGFQILHDRFINGS 244
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L + +I ALI+PFGQ +E+L T+ KYF+PI+EIVP+ LENLTDEELKKEAKNE+KND
Sbjct: 245 ALNVQIIAALIKPFGQCYEFLNQHTVRKYFIPIIEIVPQFLENLTDEELKKEAKNETKND 304
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
A+S+IIKS K LA+R+P QE+
Sbjct: 305 ALSMIIKSLKNLASRIPDQEE--------------------------------------- 325
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
TVK LEIFRLK+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH E
Sbjct: 326 ---------TVKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHGNPEE 376
Query: 392 EEWLTPDRMA 401
EEWLT +RMA
Sbjct: 377 EEWLTAERMA 386
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNE+NKVI+ V+YY HRH EEEWLT +R
Sbjct: 341 LLQISSFNGKMNALNEINKVISSVSYYTHRHGNPEEEEWLTAER 384
>gi|358423043|ref|XP_003585574.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like, partial [Bos taurus]
Length = 316
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 190/303 (62%), Positives = 221/303 (72%), Gaps = 51/303 (16%)
Query: 188 GWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPI 247
GWLVDLIN FG + GFQIL +RF N S L + +I ALI+PFGQ +E+L T+ KYF+PI
Sbjct: 1 GWLVDLINKFGILNGFQILHDRFINGSALNVQIIAALIKPFGQCYEFLNQHTVRKYFIPI 60
Query: 248 LEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLT 307
+E IVP+ LENLT
Sbjct: 61 IE------------------------------------------------IVPQFLENLT 72
Query: 308 DEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNG 367
DEELKKEAKNE+KNDA+S+IIKS K LA+R+P QE+TVK LEIFRLK+ILRLLQISSFNG
Sbjct: 73 DEELKKEAKNETKNDALSMIIKSLKNLASRIPDQEETVKNLEIFRLKMILRLLQISSFNG 132
Query: 368 KMNALNEVNKVIAGVAYYPHRH---PEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYV 424
KMNALNE+NKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L IVLRDSLHQPQYV
Sbjct: 133 KMNALNEINKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYV 192
Query: 425 EKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFV 484
EKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKLAWDFS QLDHLF
Sbjct: 193 EKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSAEQLDHLFD 252
Query: 485 CFQ 487
CF+
Sbjct: 253 CFK 255
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH---PEEEWLTPDR 680
LLQISSFNGKMNALNE+NKVI+ V+YY HRH EEEWLT +R
Sbjct: 124 LLQISSFNGKMNALNEINKVISSVSYYTHRHGNPEEEEWLTAER 167
>gi|170057372|ref|XP_001864455.1| ubiquitin specific protease 9/faf [Culex quinquefasciatus]
gi|167876777|gb|EDS40160.1| ubiquitin specific protease 9/faf [Culex quinquefasciatus]
Length = 930
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 203/369 (55%), Positives = 248/369 (67%), Gaps = 20/369 (5%)
Query: 421 PQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLD 480
PQYVEKLEKILRFLIKEKAL+ DLDAVW AQAGKH+AIVKNVH+LLAKLAWDF+ QLD
Sbjct: 3 PQYVEKLEKILRFLIKEKALTFDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWDFNTEQLD 62
Query: 481 HLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIME 540
+LF CFQ +AN+KQ E+LLEL RRLAEDDK+GVMA KVL LFW+LAHS D+ ++++
Sbjct: 63 YLFKCFQTCMKTANKKQRERLLELNRRLAEDDKNGVMAQKVLKLFWTLAHSADIPPEVLD 122
Query: 541 QALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYEPGQNL 600
QALASH+KILDYSCSQERD QKTIWL C++E K W +PALR I++IC LYE
Sbjct: 123 QALASHVKILDYSCSQERDAQKTIWLDKCVDELKRGDDWALPALRLIREICTLYE---TT 179
Query: 601 NSHA----PLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEV 656
SH L +R R + L+K+ L L + Q + N + E
Sbjct: 180 TSHTQRIHQLLTRQQQIQERLEFLKFLLKDGQL-WLCAEQAKQIWQCLTVNAAFPSDREE 238
Query: 657 NKVIAG--VAYYPHRHP-------EEEWLTPDR-QLTESGLKCFEKFFKSVNIGEGKLVL 706
G + P P E L D LTESG+KCFE+FFK+VN E + L
Sbjct: 239 CFRWFGKLMGDEPDLDPGINKDFFENNLLKLDPVVLTESGIKCFERFFKAVNSKEER--L 296
Query: 707 KVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKT 766
K K+R +LDN DLIG +YLWRVIT+A E+IA++AIDLLKEVST L +LQ+SLT+FH+
Sbjct: 297 KGKQRGYVLDNEDLIGKDYLWRVITDADENIAYKAIDLLKEVSTALSLRLQASLTEFHEN 356
Query: 767 FIAECLDRL 775
FI L+ L
Sbjct: 357 FIGRQLEDL 365
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 734 GEDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILP 793
G+D A A+ L++E+ T L S + H+ + + R + L +
Sbjct: 158 GDDWALPALRLIREICT-LYETTTSHTQRIHQLLTRQQQIQERLEFLKFLLKDGQLWLCA 216
Query: 794 E-ARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPI 848
E A+QIW L A F DRE CF+WF KLM DEPDLDP + KDFFE ++L +P+
Sbjct: 217 EQAKQIWQCLTVNAAFPSDREECFRWFGKLMGDEPDLDPGINKDFFENNLLKLDPV 272
>gi|355728155|gb|AES09434.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X [Mustela
putorius furo]
Length = 343
Score = 355 bits (910), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 185/310 (59%), Positives = 229/310 (73%), Gaps = 9/310 (2%)
Query: 381 GVAYYPHRH---PEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKE 437
V+YY HRH EEEWLT +RMA+WI+ NN+L IVLRDSLHQPQYVEKLEKILRF+IKE
Sbjct: 1 SVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFVIKE 60
Query: 438 KALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQ 497
KAL+L DLD +WAAQAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ
Sbjct: 61 KALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQ 120
Query: 498 TEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQE 557
EKLLELIRRLAEDDKDGVMA KVLNL W+LAHSDDV DIM+ AL++H+KILDYSCSQ+
Sbjct: 121 REKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQD 180
Query: 558 RDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNR 616
RD QK W+ IEE ++N KWV+PAL+QI++IC L+ E QNL+ + RS R
Sbjct: 181 RDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQ----TQRSPHVFYR 236
Query: 617 QSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWL 676
+I+ L NH+L+ L+ NL + ++ + + + V G + Y H +E L
Sbjct: 237 HDLINQLQHNHALVTLVAENLATYMESMRLYARDHEDYDPQTVRLG-SRYSHVQEVQERL 295
Query: 677 TPDRQLTESG 686
R L + G
Sbjct: 296 NFLRFLLKDG 305
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLM 823
P+A+QIW LA+ A++ CDREACFKW+SKLM
Sbjct: 312 PQAKQIWKCLAENAVYLCDREACFKWYSKLM 342
>gi|449671014|ref|XP_002160338.2| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like, partial [Hydra magnipapillata]
Length = 2142
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 188/319 (58%), Positives = 238/319 (74%), Gaps = 16/319 (5%)
Query: 330 SCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYP-HR 388
S KL+ + +P QE+ KQ E RL +ILRLLQ+S FNGKMNALNE+N+VI+ V+YY HR
Sbjct: 1 SMKLIVSCLPGQEELCKQFEELRLLMILRLLQVSPFNGKMNALNEINRVISSVSYYSNHR 60
Query: 389 H---PEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDL 445
H E+E+LT D +AKW+++NNVL IVL+D+LHQPQYVEKLEKI+RF IK K L++ DL
Sbjct: 61 HNNYEEDEYLTNDMVAKWLQENNVLVIVLKDNLHQPQYVEKLEKIIRFTIKSKTLTVKDL 120
Query: 446 DAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
D +W AQ GKH+AIVKNVH+LLAKLAWDFS QLDHLF FQA W SAN+KQ EKLLELI
Sbjct: 121 DTIWMAQLGKHEAIVKNVHDLLAKLAWDFSAEQLDHLFSRFQAGWNSANKKQQEKLLELI 180
Query: 506 RRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCS--QERDKQKT 563
RRLAEDDK+GV+A KVLNL W LAHSDD+ TDIM+QAL +H+KILDYSCS Q+RD K
Sbjct: 181 RRLAEDDKEGVIAHKVLNLLWQLAHSDDLPTDIMDQALNAHIKILDYSCSQTQDRDNLKI 240
Query: 564 IWLQTCIEEFKSNPKWVVPALRQIKDICCL-YEPGQNLNSHAPLSSRSHSSNNRQSIIDI 622
W+ C+EE K WV+PAL+QI+ IC L YE G +++H L R ++++
Sbjct: 241 HWIDLCVEEIKVG-SWVIPALKQIRAICELFYENGNQVSNHHILY--------RNTVVES 291
Query: 623 LIKNHSLIMLITNNLCSLL 641
+ H+++ L+ NL +
Sbjct: 292 IQNKHAIVSLVAENLTKYM 310
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
L E GLKCFE+FFK VN+ EG L K + + +L++ LIG +YLW+VIT A DI +A
Sbjct: 418 LNEHGLKCFERFFKFVNLKEGYLQ-KKRNGAFVLEHTQLIGYDYLWKVITQASVDIVTQA 476
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRL 775
I++L+E+ T++G +L+ S + H FI C DR+
Sbjct: 477 IEVLREIYTNIGSQLKQS--EIHSMFIKTCSDRI 508
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A QIW LA ++F D++ CFKWFS +M D+PDLDP + + FFE +VL +P
Sbjct: 361 PQAEQIWVCLAINSVFPVDQDICFKWFSVVMGDDPDLDPDITRQFFENNVLKTDP 415
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Query: 642 QISSFNGKMNALNEVNKVIAGVAYYP-HRH---PEEEWLTPD---RQLTESG-----LKC 689
Q+S FNGKMNALNE+N+VI+ V+YY HRH E+E+LT D + L E+ LK
Sbjct: 32 QVSPFNGKMNALNEINRVISSVSYYSNHRHNNYEEDEYLTNDMVAKWLQENNVLVIVLKD 91
Query: 690 FEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWR---VITNAGEDIAFRAIDLLK 746
+ V E + +K ++L + + D I L + ++ N + +A A D
Sbjct: 92 NLHQPQYVEKLEKIIRFTIKSKTLTVKDLDTIWMAQLGKHEAIVKNVHDLLAKLAWDFSA 151
Query: 747 EVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
E HL + Q+ +K + L+ +R
Sbjct: 152 EQLDHLFSRFQAGWNSANKKQQEKLLELIR 181
>gi|326676999|ref|XP_002665714.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Danio rerio]
Length = 2583
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 245/886 (27%), Positives = 393/886 (44%), Gaps = 169/886 (19%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + D+ +S E +C G + +FP L L+S++ + W +P E+
Sbjct: 79 PPP-----AYHDVVESERSNDENGNCS-GNSMEFPTTNLYELESRVFTDHWSIPYKREES 132
Query: 62 L-ECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNC 120
L +CLI + +D D E C+RF + +F K+LT AVH W IH IYN
Sbjct: 133 LGKCLIASTCLARHGLADAD-ENCKRFIDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNML 191
Query: 121 QKLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA- 177
L++L+ ++ QD P L+ +LTM FNP N++H F + ++ +D +FA
Sbjct: 192 MLLVDLVAERVKQDPIPIGLMGVLTMAFNPDNEYH-FKNRMKACQRNWAEVFGEDSMFAV 250
Query: 178 -RPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLT 236
Y K GWLVDL+N FG MGGF + + N+ + I + AL++P G EYL
Sbjct: 251 SPSSSYQKEPHGWLVDLVNRFGEMGGFTAIQCKL-NQEEIEIGCVSALVQPLGVCAEYLN 309
Query: 237 LPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDT 296
+ P++ + ++NL +++LK + +L++
Sbjct: 310 SSLVQPMLDPVIHKMITYVQNLEEKDLKDK-----------------RLVS--------- 343
Query: 297 EIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKII 356
+PE+L + KLL R Q + V ++ RL I+
Sbjct: 344 --IPELLSAI-------------------------KLLCMRF--QRELVNVVDDLRLDIL 374
Query: 357 LRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRD 416
LR+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L
Sbjct: 375 LRMLKTPHFSAKMNSLKEVTKLIEESTV---SKTVKNAIDTDRLLDWLVENSVLSIALEG 431
Query: 417 SLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSP 476
++ Q QY ++++ I+ L + LSL +L +W QAG+ +++N+H ++A A F+
Sbjct: 432 NIDQAQYCDRIKGIIELLGSK--LSLDELSKIWKIQAGQSSTVIENIHTIIAAAAVKFNF 489
Query: 477 VQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMT 536
QL HLFV Q SW + + +KLL LI R+ + + KVL + W LAH + T
Sbjct: 490 DQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLEVLWELAHLPTLPT 549
Query: 537 DIMEQALASHLKIL-DYSCSQERDKQKTIWLQTCIEEFK-----SNPK--WVVPALRQIK 588
+++QAL HL IL D +E K+ ++ CIE+ K +NP+ WVVPALRQ+
Sbjct: 550 SLVQQALEEHLTILSDAYAVKETIKRN--YIIKCIEDIKKSSQQTNPQTVWVVPALRQLH 607
Query: 589 DICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQIS 644
+I +RS Q SII L KN ++ LIT +L S +++
Sbjct: 608 EI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLITGSLVSCHRLA 650
Query: 645 SFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTE----------------SGLK 688
N L+ V +Y + ++L Q SG+
Sbjct: 651 VSVAGSNGLSGSTLVDGRYSYQEYLEGHLKFLAFFLQEASLYLVWNRAKEIWECLVSGMD 710
Query: 689 --------CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNADLI----------- 721
CFE F K + E + +LK++ + ++ +L
Sbjct: 711 VCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLEPYEITMNGFNLFKTFFENVNLSD 770
Query: 722 ------------------GAEYLWRV-ITNAGEDIAFRAIDLLKEVS-THLGPKLQSSLT 761
G +++WR+ + + EDIA AI L+ S +L PK++
Sbjct: 771 HRLKRQGTQLCVERLDLAGMDFIWRIAMESPDEDIANEAIQLIITYSYINLNPKMKKDSV 830
Query: 762 QFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 831 SLHKKFIADCYKRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 875
>gi|417414101|gb|JAA53351.1| Putative ubiquitin carboxyl-terminal hydrolase 24, partial
[Desmodus rotundus]
Length = 2270
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 231/901 (25%), Positives = 395/901 (43%), Gaps = 185/901 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 6 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 58
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 59 LGKCLLASTYLARLGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 118
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 119 LLIELVAERIKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAIS 177
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + +++ + + + AL++P G EYL
Sbjct: 178 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLRSED-IELGAVSALVQPLGVCAEYLNS 236
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P++ + + ++ +++LK + +L++
Sbjct: 237 SVVQPMLDPVIHTTIQDVRSVEEKDLKDK-----------------RLVS---------- 269
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 270 -IPELL-------------------------SAIKLLCMRF--QPDLVTVVDDLRLDILL 301
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 302 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 358
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 359 IDQAQYCDRIKGIIELL--GSKLSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSD 416
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 417 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSS 476
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK--------------------SNP 577
+++QAL HL IL + + ++ K ++ CIE+ K +NP
Sbjct: 477 LIQQALDEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKKKDGFKSSQLNNP 535
Query: 578 K--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIM 631
+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 536 QFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVK 578
Query: 632 LITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPH----------------------- 668
L+T +L + ++++ L V V Y +
Sbjct: 579 LVTGSLIACHRLAAAVAGPGGLTGVTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNR 638
Query: 669 ------------------RHPEEEWLTPDRQLTESG------------LKCFE------K 692
R EW T + ES L+ +E
Sbjct: 639 AKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFN 698
Query: 693 FFKS----VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAFRAIDLLKE 747
FK+ VN+ + +L K + L ++ +LIG +++W++ + + E+IA AI L+
Sbjct: 699 LFKTFFENVNLCDHRL--KRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIIN 756
Query: 748 VS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEA 806
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A
Sbjct: 757 YSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPT 815
Query: 807 I 807
+
Sbjct: 816 V 816
>gi|417414115|gb|JAA53358.1| Putative ubiquitin carboxyl-terminal hydrolase 24, partial
[Desmodus rotundus]
Length = 2417
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 231/901 (25%), Positives = 395/901 (43%), Gaps = 185/901 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 6 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 58
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 59 LGKCLLASTYLARLGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 118
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 119 LLIELVAERIKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAIS 177
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + +++ + + + AL++P G EYL
Sbjct: 178 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLRSED-IELGAVSALVQPLGVCAEYLNS 236
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P++ + + ++ +++LK + +L++
Sbjct: 237 SVVQPMLDPVIHTTIQDVRSVEEKDLKDK-----------------RLVS---------- 269
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 270 -IPELL-------------------------SAIKLLCMRF--QPDLVTVVDDLRLDILL 301
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 302 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 358
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 359 IDQAQYCDRIKGIIELL--GSKLSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSD 416
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 417 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSS 476
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK--------------------SNP 577
+++QAL HL IL + + ++ K ++ CIE+ K +NP
Sbjct: 477 LIQQALDEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKKKDGFKSSQLNNP 535
Query: 578 K--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIM 631
+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 536 QFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVK 578
Query: 632 LITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPH----------------------- 668
L+T +L + ++++ L V V Y +
Sbjct: 579 LVTGSLIACHRLAAAVAGPGGLTGVTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNR 638
Query: 669 ------------------RHPEEEWLTPDRQLTESG------------LKCFE------K 692
R EW T + ES L+ +E
Sbjct: 639 AKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFN 698
Query: 693 FFKS----VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAFRAIDLLKE 747
FK+ VN+ + +L K + L ++ +LIG +++W++ + + E+IA AI L+
Sbjct: 699 LFKTFFENVNLCDHRL--KRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIIN 756
Query: 748 VS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEA 806
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A
Sbjct: 757 YSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPT 815
Query: 807 I 807
+
Sbjct: 816 V 816
>gi|417413974|gb|JAA53295.1| Putative ubiquitin carboxyl-terminal hydrolase 24, partial
[Desmodus rotundus]
Length = 1822
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 231/901 (25%), Positives = 395/901 (43%), Gaps = 185/901 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 14 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 66
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 67 LGKCLLASTYLARLGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 126
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 127 LLIELVAERIKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAIS 185
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + +++ + + + AL++P G EYL
Sbjct: 186 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLRSED-IELGAVSALVQPLGVCAEYLNS 244
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P++ + + ++ +++LK + +L++
Sbjct: 245 SVVQPMLDPVIHTTIQDVRSVEEKDLKDK-----------------RLVS---------- 277
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 278 -IPELLSAI-------------------------KLLCMRF--QPDLVTVVDDLRLDILL 309
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 310 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 366
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 367 IDQAQYCDRIKGIIELL--GSKLSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSD 424
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 425 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSS 484
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK--------------------SNP 577
+++QAL HL IL + + ++ K ++ CIE+ K +NP
Sbjct: 485 LIQQALDEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKKKDGFKSSQLNNP 543
Query: 578 K--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIM 631
+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 544 QFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVK 586
Query: 632 LITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPH----------------------- 668
L+T +L + ++++ L V V Y +
Sbjct: 587 LVTGSLIACHRLAAAVAGPGGLTGVTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNR 646
Query: 669 ------------------RHPEEEWLTPDRQLTESG------------LKCFE------K 692
R EW T + ES L+ +E
Sbjct: 647 AKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFN 706
Query: 693 FFKS----VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAFRAIDLLKE 747
FK+ VN+ + +L K + L ++ +LIG +++W++ + + E+IA AI L+
Sbjct: 707 LFKTFFENVNLCDHRL--KRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIIN 764
Query: 748 VS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEA 806
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A
Sbjct: 765 YSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPT 823
Query: 807 I 807
+
Sbjct: 824 V 824
>gi|403258440|ref|XP_003921771.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Saimiri
boliviensis boliviensis]
Length = 2597
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 237/898 (26%), Positives = 395/898 (43%), Gaps = 186/898 (20%)
Query: 6 PGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECL 65
PG+ S+K + + + G G G +FP L L+S++ + W +P E+ L
Sbjct: 78 PGSESEK-----AKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKC 130
Query: 66 IKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLE 125
+ A+ L + E C+RF + +F K+LT AVH W IH IYN L+E
Sbjct: 131 LLASTYLARLGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIE 190
Query: 126 LIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDY 182
L+ ++ QD P LL +LTM FNP N++H F + + + +FA P+
Sbjct: 191 LVAERIKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVSPVST 249
Query: 183 YKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTIL 241
++ + GW+VDL+N FG +GGF + + ++ + + + ALI+P G EYL +
Sbjct: 250 FQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNSSVV- 307
Query: 242 KYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPE 301
P+L+ P IL + D +E +K +L++ +PE
Sbjct: 308 ---QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS-----------IPE 340
Query: 302 ILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQ 361
+L + KLL R Q D V ++ RL I+LR+L+
Sbjct: 341 LL-------------------------SAIKLLCMRF--QPDLVTIVDDLRLDILLRMLK 373
Query: 362 ISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQP 421
F+ KMN+L EV K+I + + DR+ W+ +N+VL I L ++ Q
Sbjct: 374 SPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQA 430
Query: 422 QYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDH 481
QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+ QL+H
Sbjct: 431 QYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNH 488
Query: 482 LFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQ 541
LFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + + +++Q
Sbjct: 489 LFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSSLIQQ 548
Query: 542 ALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SNPK-- 578
AL HL IL + + ++ K ++ CIE+ K +NP+
Sbjct: 549 ALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNNPQFV 607
Query: 579 WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLIT 634
WVVPALRQ+ +I +RS Q SII L KN ++ L+T
Sbjct: 608 WVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVT 650
Query: 635 NNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPH-------------------------- 668
+L + ++++ L+ V Y +
Sbjct: 651 GSLIACHRLAAAVAGQGGLSGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRARE 710
Query: 669 ---------------RHPEEEWLTPDRQLTESG------------LKCFE------KFFK 695
R EW T + ES L+ +E FK
Sbjct: 711 IWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFNLFK 770
Query: 696 S----VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAFRAIDLLKEVS- 749
+ VN+ + +L K + L ++ +LIG +++W++ + + E+IA AI L+ S
Sbjct: 771 TFFENVNLCDHRL--KRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSY 828
Query: 750 THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
+L P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 829 INLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 885
>gi|403310688|ref|NP_001258135.1| ubiquitin carboxyl-terminal hydrolase 24 [Rattus norvegicus]
Length = 2617
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 234/902 (25%), Positives = 394/902 (43%), Gaps = 186/902 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 94 PPP-----AYHEVVDAEKNDENGNCSGEGV--EFPTTNLYELESRVLTDHWSIPYKREES 146
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 147 LGKCLLASTYLARLGLSESDENCKRFMERCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 206
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 207 LLIELVAERMKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVS 265
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + ++ + + + AL++P G EYL
Sbjct: 266 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNS 324
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 325 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 357
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 358 -IPELL-------------------------SAIKLLCMRF--QPDLVTIVDDLRLDILL 389
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 390 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 446
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 447 IDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNAD 504
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 505 QLNHLFVLIQKSWETETDRVRQKLLSLIGRIGREARFEATSGKVLDVLWELAHLPTLPSS 564
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SN 576
+++QAL HL IL + + ++ K ++ CIE+ K +N
Sbjct: 565 LIQQALEEHLTILSDAYAV-KEAVKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQHNN 623
Query: 577 PK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLI 630
P+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 624 PQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIV 666
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPH---------------------- 668
L+T +L + ++++ L + V Y +
Sbjct: 667 KLVTGSLLACHRLAAAVAGPGGLTGLTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWN 726
Query: 669 -------------------RHPEEEWLTPDRQLTESG------------LKCFE------ 691
R EW T + ES L+ +E
Sbjct: 727 RAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGF 786
Query: 692 KFFKS----VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAFRAIDLLK 746
FK+ VN+ + +L K + L ++ +L+G +++W++ + + E+IA AI L+
Sbjct: 787 NLFKTFFENVNLCDHRL--KRQGAQLYVEKLELVGMDFIWKIAMESPDEEIANEAIQLII 844
Query: 747 EVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQE 805
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A
Sbjct: 845 NYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMP 903
Query: 806 AI 807
+
Sbjct: 904 TV 905
>gi|148698872|gb|EDL30819.1| mCG121553, isoform CRA_a [Mus musculus]
Length = 2511
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 233/902 (25%), Positives = 394/902 (43%), Gaps = 186/902 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 40 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 92
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 93 LGKCLLASTYLARLGLSESDENCKRFMERCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 152
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 153 LLIELVAERMKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAIS 211
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + ++ + + + AL++P G EYL
Sbjct: 212 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNS 270
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 271 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 303
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q V ++ RL I+L
Sbjct: 304 -IPELL-------------------------SAIKLLCMRF--QPALVTTVDALRLDILL 335
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 336 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 392
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 393 IDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNAD 450
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 451 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFEATSGKVLDVLWELAHLPTLPSS 510
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SN 576
+++QAL HL IL + + ++ K ++ CIE+ K +N
Sbjct: 511 LIQQALEEHLTILSDAYAV-KEAVKRSYIIKCIEDIKRPGEWSSLEKNKKDGFKSSQLNN 569
Query: 577 PK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLI 630
P+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 570 PQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIV 612
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPH---------------------- 668
L+T +L + ++++ L + V Y +
Sbjct: 613 KLVTGSLLACHRLAAAVAGPGGLTGLTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWN 672
Query: 669 -------------------RHPEEEWLTPDRQLTESG------------LKCFE------ 691
R EW T + ES L+ +E
Sbjct: 673 RAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGF 732
Query: 692 KFFKS----VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAFRAIDLLK 746
FK+ VN+ + +L K + L ++ +L+G +++W++ + + E+IA AI L+
Sbjct: 733 NLFKTFFENVNLCDHRL--KRQGAQLYVEKLELVGMDFIWKIAMESPDEEIANEAIQLII 790
Query: 747 EVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQE 805
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A
Sbjct: 791 NYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMP 849
Query: 806 AI 807
+
Sbjct: 850 TV 851
>gi|260064007|ref|NP_899048.2| ubiquitin carboxyl-terminal hydrolase 24 [Mus musculus]
gi|212288549|sp|B1AY13.1|UBP24_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 24; AltName:
Full=Deubiquitinating enzyme 24; AltName: Full=Ubiquitin
thioesterase 24; AltName:
Full=Ubiquitin-specific-processing protease 24
Length = 2617
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 233/902 (25%), Positives = 394/902 (43%), Gaps = 186/902 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 94 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 146
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 147 LGKCLLASTYLARLGLSESDENCKRFMERCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 206
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 207 LLIELVAERMKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAIS 265
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + ++ + + + AL++P G EYL
Sbjct: 266 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNS 324
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 325 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 357
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q V ++ RL I+L
Sbjct: 358 -IPELL-------------------------SAIKLLCMRF--QPALVTTVDALRLDILL 389
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 390 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 446
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 447 IDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNAD 504
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 505 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFEATSGKVLDVLWELAHLPTLPSS 564
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SN 576
+++QAL HL IL + + ++ K ++ CIE+ K +N
Sbjct: 565 LIQQALEEHLTILSDAYAV-KEAVKRSYIIKCIEDIKRPGEWSSLEKNKKDGFKSSQLNN 623
Query: 577 PK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLI 630
P+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 624 PQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIV 666
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPH---------------------- 668
L+T +L + ++++ L + V Y +
Sbjct: 667 KLVTGSLLACHRLAAAVAGPGGLTGLTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWN 726
Query: 669 -------------------RHPEEEWLTPDRQLTESG------------LKCFE------ 691
R EW T + ES L+ +E
Sbjct: 727 RAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGF 786
Query: 692 KFFKS----VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAFRAIDLLK 746
FK+ VN+ + +L K + L ++ +L+G +++W++ + + E+IA AI L+
Sbjct: 787 NLFKTFFENVNLCDHRL--KRQGAQLYVEKLELVGMDFIWKIAMESPDEEIANEAIQLII 844
Query: 747 EVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQE 805
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A
Sbjct: 845 NYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMP 903
Query: 806 AI 807
+
Sbjct: 904 TV 905
>gi|395840651|ref|XP_003793167.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Otolemur
garnettii]
Length = 2619
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 234/900 (26%), Positives = 395/900 (43%), Gaps = 182/900 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 96 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 148
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 149 LGKCLLASTYLARLGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 208
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 209 LLIELVAERIKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAIS 267
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + ++ + + + AL++P G EYL
Sbjct: 268 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNS 326
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 327 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 359
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 360 -IPELL-------------------------SAIKLLCMRF--QPDLVTVVDDLRLDILL 391
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL + L +
Sbjct: 392 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSVALEGN 448
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 449 IDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSD 506
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + N + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 507 QLNHLFVLIQKSWETENDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSS 566
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SN 576
+++QAL HL IL + + ++ K ++ CIE+ K +N
Sbjct: 567 LIQQALEEHLTILSDAYAV-KEAVKRSYIIKCIEDIKRPGEWSSLEKNKKDGFKSSQLNN 625
Query: 577 PK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLI 630
P+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 626 PQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIV 668
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH------------------ 670
L+T +L + ++++ L + V Y Y H
Sbjct: 669 KLVTGSLIACHRLAAAVAGPGGLTGLTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWN 728
Query: 671 -PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNA 718
+E W L + + E + CFE F K + E + +LK++ + ++
Sbjct: 729 RAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGF 788
Query: 719 DL-----------------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEV 748
+L IG +++W++ + + E+IA AI L+
Sbjct: 789 NLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINY 848
Query: 749 S-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 849 SYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 907
>gi|354466645|ref|XP_003495784.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Cricetulus
griseus]
Length = 2518
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 232/880 (26%), Positives = 385/880 (43%), Gaps = 181/880 (20%)
Query: 24 GTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEP 83
G G G +FP L L+S++ + W +P E+ L + A+ L + E
Sbjct: 12 GNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLARLGLSESDEN 69
Query: 84 CQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLDI 141
C+RF + +F K+LT AVH W IH IYN L+EL+ ++ QD P LL +
Sbjct: 70 CKRFMERCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPIGLLGV 129
Query: 142 LTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWLVDLINLFGS 199
LTM FNP N++H F + + + +FA P+ ++ + GW+VDL+N FG
Sbjct: 130 LTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAISPVSTFQKEPHGWVVDLVNKFGE 188
Query: 200 MGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLT 259
+GGF + + ++ L + + AL++P G EYL + P+L+ P IL +
Sbjct: 189 LGGFAAIQAKLHSED-LELGAVSALVQPLGVCAEYLNSTVV----QPMLD--PVILTTIQ 241
Query: 260 DEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNES 319
D +E +K +L++ +PE+L
Sbjct: 242 DVRSVEEKD-----------LKDKRLVS-----------IPELL---------------- 263
Query: 320 KNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVI 379
+ KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV K+I
Sbjct: 264 ---------SAIKLLCMRF--QPDLVTIVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLI 312
Query: 380 AGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKA 439
+ + DR+ W+ +N+VL I L ++ Q QY ++++ I+ L +
Sbjct: 313 EDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSK-- 367
Query: 440 LSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTE 499
LSL +L +W Q+G+ +++N+H ++A A F+ QL+HLFV Q SW + + + +
Sbjct: 368 LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNADQLNHLFVLIQKSWETESDRVRQ 427
Query: 500 KLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERD 559
KLL LI R+ + + + KVL++ W LAH + + +++QAL HL IL + + ++
Sbjct: 428 KLLSLIGRIGREARFEATSGKVLDVLWELAHLPTLPSSLIQQALEEHLTILSDAYAV-KE 486
Query: 560 KQKTIWLQTCIEEFK---------------------SNPK--WVVPALRQIKDICCLYEP 596
K ++ CIE+ K +NP+ WVVPALRQ+ +I
Sbjct: 487 AIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNNPQFVWVVPALRQLHEI------ 540
Query: 597 GQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNA 652
+RS Q SII L KN ++ L+T +L + ++++
Sbjct: 541 -----------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLLACHRLAAAVAGPGG 589
Query: 653 LNEVNKVIAGVAYYPH-----------------------------------------RHP 671
L + V Y + R
Sbjct: 590 LTGLTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRAKEIWECLVTGQDVCELDREM 649
Query: 672 EEEWLTPDRQLTESG------------LKCFE------KFFKS----VNIGEGKLVLKVK 709
EW T + ES L+ +E FK+ VN+ + +L K +
Sbjct: 650 CFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFNLFKTFFENVNLCDHRL--KRQ 707
Query: 710 KRSLLLDNADLIGAEYLWRV-ITNAGEDIAFRAIDLLKEVS-THLGPKLQSSLTQFHKTF 767
L ++ +LIG +++W++ + + E+IA AI L+ S +L P+L+ HK F
Sbjct: 708 GAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSYINLNPRLKKDSVSLHKKF 767
Query: 768 IAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
IA+C RL +G T + A ++ TA A +
Sbjct: 768 IADCYTRLEVASSALG-GPTLTHAVTRATKMLTATAMPTV 806
>gi|297278796|ref|XP_001108457.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Macaca
mulatta]
Length = 2624
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 235/900 (26%), Positives = 396/900 (44%), Gaps = 182/900 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 96 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 148
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 149 LGKCLLASTYLARLGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 208
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 209 LLIELVAERIKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVS 267
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + ++ + + + ALI+P G EYL+
Sbjct: 268 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLSS 326
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 327 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 359
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 360 -IPELL-------------------------SAIKLLCMRF--QPDLVTIVDDLRLDILL 391
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 392 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 448
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 449 IDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSD 506
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 507 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSS 566
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SN 576
+++QAL HL IL + + ++ K ++ CIE+ K +N
Sbjct: 567 LIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNN 625
Query: 577 PK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLI 630
P+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 626 PQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIV 668
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH------------------ 670
L+T +L + ++++ L+ V Y Y H
Sbjct: 669 KLVTGSLIACHRLAAAVAGPGGLSSSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWN 728
Query: 671 -PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNA 718
+E W L + + E + CFE F K + E + +LK++ + ++
Sbjct: 729 RAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGF 788
Query: 719 DL-----------------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEV 748
+L IG +++W++ + + E+IA AI L+
Sbjct: 789 NLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINY 848
Query: 749 S-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 849 SYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 907
>gi|73956404|ref|XP_536697.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Canis lupus
familiaris]
Length = 2527
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 234/897 (26%), Positives = 392/897 (43%), Gaps = 177/897 (19%)
Query: 5 QPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELEC 64
Q G+ D + + + G G G +FP L L+S++ + W +P E+ L
Sbjct: 2 QAGSIQDSLAKDVTKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGK 59
Query: 65 LIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLL 124
+ A+ L + E C+RF + +F K+LT AVH W IH IYN L+
Sbjct: 60 CLLASTYLARLGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLI 119
Query: 125 ELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPID 181
EL+ ++ QD P LL +LTM FNP N++H F + + + +FA P+
Sbjct: 120 ELVAERIKQDPIPTGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWTEVFGEGNMFAVSPVS 178
Query: 182 YYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTI 240
++ + GW+VDL+N FG +GGF + + ++ + + + AL++P G EYL +
Sbjct: 179 TFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNSSVV 237
Query: 241 LKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVP 300
P+L+ P IL + D +E +K +L++ +P
Sbjct: 238 ----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS-----------IP 269
Query: 301 EILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLL 360
E+L + KLL R Q D V ++ RL I+LR+L
Sbjct: 270 ELL-------------------------SAIKLLCMRF--QPDLVTVVDDLRLDILLRML 302
Query: 361 QISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQ 420
+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L ++ Q
Sbjct: 303 KSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQ 359
Query: 421 PQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLD 480
QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+ QL+
Sbjct: 360 AQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLN 417
Query: 481 HLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIME 540
HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + + +++
Sbjct: 418 HLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSSLIQ 477
Query: 541 QALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SNPK- 578
QAL HL IL + + ++ K ++ CIE+ K +NP+
Sbjct: 478 QALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNNPQF 536
Query: 579 -WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLI 633
WVVPALRQ+ +I +RS Q SII L KN ++ L+
Sbjct: 537 VWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLV 579
Query: 634 TNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH-------------------PE 672
T +L + ++++ L V Y Y H +
Sbjct: 580 TGSLIACHRLAAAVAGPGGLTGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRAK 639
Query: 673 EEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNADL- 720
E W L + + E + CFE F K + E + +LK++ + ++ +L
Sbjct: 640 EIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFNLF 699
Query: 721 ----------------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEVS-T 750
IG +++W++ + + E+IA AI L+ S
Sbjct: 700 KTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSYI 759
Query: 751 HLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
+L P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 760 NLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 815
>gi|291398812|ref|XP_002715648.1| PREDICTED: ubiquitin specific protease 24 [Oryctolagus cuniculus]
Length = 2607
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 238/905 (26%), Positives = 404/905 (44%), Gaps = 192/905 (21%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 95 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 147
Query: 62 L-ECLIK----AAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCI 116
L +CL+ A + LC+++ E C+RF + +F K+LT AVH W IH I
Sbjct: 148 LGKCLLASTYLARLGLCESD-----ENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGI 202
Query: 117 YNNCQKLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDE 174
YN L+EL+ ++ QD P LL +LTM FNP N++H F + + +
Sbjct: 203 YNMLMLLIELVAERIKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGN 261
Query: 175 IFA-RPIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVH 232
+FA P+ ++ + GW+VDL+N FG +GGF + + ++ + + + AL++P G
Sbjct: 262 MFAVSPVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCA 320
Query: 233 EYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPH 292
EYL P++++ P+L+ P IL + D +E +K +L++
Sbjct: 321 EYLN-PSVVQ---PMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS----- 358
Query: 293 QEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFR 352
+PE+L + KLL R Q D V ++ R
Sbjct: 359 ------IPELLSAI-------------------------KLLCMRF--QPDLVTAVDELR 385
Query: 353 LKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEI 412
L I+LR+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I
Sbjct: 386 LDILLRMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSI 442
Query: 413 VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAW 472
L ++ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A
Sbjct: 443 ALEGNIDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAV 500
Query: 473 DFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSD 532
F+ QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH
Sbjct: 501 KFNSDQLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLP 560
Query: 533 DVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK------------------ 574
+ + +++QAL HL IL + + ++ K ++ CIE+ K
Sbjct: 561 TLPSSLIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKS 619
Query: 575 ---SNPK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIK 625
+NP+ WVVPALRQ+ +I +RS Q SII L K
Sbjct: 620 SQLNNPQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKK 662
Query: 626 NHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH------------- 670
N ++ L+T +L + ++++ L V Y Y H
Sbjct: 663 NFEIVKLVTGSLLACHRLAAAVAGPGGLTGSTLVDGRYTYREYLEAHLKFLAFFLQEATL 722
Query: 671 ------PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSL 713
+E W L + + E + CFE F K + E + +LK++ +
Sbjct: 723 YLGWNRAKEIWECLVTGQDVCELDREVCFEWFTKGQHDLESDVQQQLFKEKILKLESYEI 782
Query: 714 LLDNADL-----------------------------IGAEYLWRV-ITNAGEDIAFRAID 743
++ +L IG +++W++ + + E+IA AI
Sbjct: 783 TMNGFNLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQ 842
Query: 744 LLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTAL 802
L+ S +L P+L+ HK FIA+C RL A +G T + A ++ TA
Sbjct: 843 LIISYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTAT 901
Query: 803 AQEAI 807
A +
Sbjct: 902 AMPTV 906
>gi|297664821|ref|XP_002810822.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Pongo abelii]
Length = 2619
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 235/900 (26%), Positives = 396/900 (44%), Gaps = 182/900 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 96 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 148
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 149 LGKCLLASTYLARLGLSESDENCRRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 208
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 209 LLIELVAERIKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVS 267
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + ++ + + + ALI+P G EYL+
Sbjct: 268 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLSS 326
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 327 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 359
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 360 -IPELL-------------------------SAIKLLCMRF--QPDLVTIVDDLRLDILL 391
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 392 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 448
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 449 IDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSD 506
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 507 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSS 566
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SN 576
+++QAL HL IL + + ++ K ++ CIE+ K +N
Sbjct: 567 LIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNN 625
Query: 577 PK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLI 630
P+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 626 PQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIV 668
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH------------------ 670
L+T +L + ++++ L+ V Y Y H
Sbjct: 669 KLVTGSLIACHRLAAAVAGPGGLSGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWN 728
Query: 671 -PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNA 718
+E W L + + E + CFE F K + E + +LK++ + ++
Sbjct: 729 RAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGF 788
Query: 719 DL-----------------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEV 748
+L IG +++W++ + + E+IA AI L+
Sbjct: 789 NLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINY 848
Query: 749 S-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 849 SYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 907
>gi|426329775|ref|XP_004025910.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 24 [Gorilla gorilla gorilla]
Length = 2619
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 235/900 (26%), Positives = 395/900 (43%), Gaps = 182/900 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 96 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 148
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 149 LGKCLLASTYLARLGLSESDENCRRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 208
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 209 LLIELVAERIKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVS 267
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + ++ + + + ALI+P G EYL
Sbjct: 268 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNS 326
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 327 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 359
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 360 -IPELL-------------------------SAVKLLCMRF--QPDLVTIVDDLRLDILL 391
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 392 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 448
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 449 IDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSD 506
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 507 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSS 566
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SN 576
+++QAL HL IL + + ++ K ++ CIE+ K +N
Sbjct: 567 LIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNN 625
Query: 577 PK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLI 630
P+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 626 PQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIV 668
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH------------------ 670
L+T +L + ++++ L+ V Y Y H
Sbjct: 669 KLVTGSLIACHRLAAAVAGPGGLSGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWN 728
Query: 671 -PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNA 718
+E W L + + E + CFE F K + E + +LK++ + ++
Sbjct: 729 RAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGF 788
Query: 719 DL-----------------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEV 748
+L IG +++W++ + + E+IA AI L+
Sbjct: 789 NLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINY 848
Query: 749 S-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 849 SYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 907
>gi|402854697|ref|XP_003891997.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Papio anubis]
Length = 2619
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 235/900 (26%), Positives = 395/900 (43%), Gaps = 182/900 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 96 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 148
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 149 LGKCLLASTYLARLGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 208
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 209 LLIELVAERIKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVS 267
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + ++ + + + ALI+P G EYL
Sbjct: 268 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNS 326
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 327 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 359
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 360 -IPELL-------------------------SAIKLLCMRF--QPDLVTIVDDLRLDILL 391
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 392 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 448
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 449 IDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSD 506
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 507 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSS 566
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SN 576
+++QAL HL IL + + ++ K ++ CIE+ K +N
Sbjct: 567 LIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNN 625
Query: 577 PK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLI 630
P+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 626 PQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIV 668
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH------------------ 670
L+T +L + ++++ L+ V Y Y H
Sbjct: 669 KLVTGSLIACHRLAAAVAGPGGLSSSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWN 728
Query: 671 -PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNA 718
+E W L + + E + CFE F K + E + +LK++ + ++
Sbjct: 729 RAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGF 788
Query: 719 DL-----------------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEV 748
+L IG +++W++ + + E+IA AI L+
Sbjct: 789 NLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINY 848
Query: 749 S-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 849 SYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 907
>gi|301787459|ref|XP_002929145.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like
[Ailuropoda melanoleuca]
Length = 2616
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 234/899 (26%), Positives = 394/899 (43%), Gaps = 181/899 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 94 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 146
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 147 LGKCLLASTYLARLGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 206
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 207 LLIELVAERIKQDPIPTGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWTEVFGEGNMFAVS 265
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + ++ + + + AL++P G EYL
Sbjct: 266 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNS 324
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 325 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 357
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 358 -IPELLSAI-------------------------KLLCMRF--QPDLVTVVDDLRLDILL 389
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 390 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 446
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 447 IDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSD 504
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 505 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSS 564
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK--------------------SNP 577
+++QAL HL IL + + ++ K ++ CIE+ K +NP
Sbjct: 565 LIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKKKDGFKSSQLNNP 623
Query: 578 K--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIM 631
+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 624 QFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVK 666
Query: 632 LITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH------------------- 670
L+T +L + ++++ L V Y Y H
Sbjct: 667 LVTGSLIACHRLAAAVAGPGGLTGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNR 726
Query: 671 PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNAD 719
+E W L + + E + CFE F K + E + +LK++ + ++ +
Sbjct: 727 AKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFN 786
Query: 720 L-----------------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEVS 749
L IG +++W++ + + E+IA AI L+ S
Sbjct: 787 LFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYS 846
Query: 750 -THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
+L P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 847 YINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 904
>gi|410967480|ref|XP_003990247.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Felis catus]
Length = 2523
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 227/887 (25%), Positives = 390/887 (43%), Gaps = 177/887 (19%)
Query: 15 SQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCK 74
+S + + G G G +FP L L+S++ + W +P E+ L + A+ L +
Sbjct: 8 GESKKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLAR 65
Query: 75 TNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQD 134
E C+RF + +F K+LT AVH W IH IYN L+EL+ ++ QD
Sbjct: 66 LGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQD 125
Query: 135 VFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWL 190
P LL +LTM FNP N++H F + ++ + +FA P+ ++ + GW+
Sbjct: 126 PIPTGLLGVLTMAFNPDNEYH-FKNRMKTSQRNWTEVFGEGNMFAVSPVSTFQKEPHGWV 184
Query: 191 VDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEI 250
VDL+N FG +GGF + + ++ + + + AL++P G EYL + P++
Sbjct: 185 VDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNSSVVQPMLDPVILT 243
Query: 251 VPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEE 310
+ + ++ +++LK + +L++ +PE+L
Sbjct: 244 AIQDVRSVEEKDLKDK-----------------RLVS-----------IPELL------- 268
Query: 311 LKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMN 370
+ KLL R Q D V ++ RL I+LR+L+ F+ KMN
Sbjct: 269 ------------------SAIKLLCMRF--QPDLVTVVDDLRLDILLRMLKSPHFSAKMN 308
Query: 371 ALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKI 430
+L EV K+I + + DR+ W+ +N+VL I L ++ Q QY ++++ I
Sbjct: 309 SLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGI 365
Query: 431 LRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASW 490
+ L + LSL +L +W Q+G+ +++N+H ++A A F+ QL+HLFV Q SW
Sbjct: 366 IELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQKSW 423
Query: 491 TSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKIL 550
+ + + +KLL LI R+ + + + KVL++ W LAH + + +++QAL HL IL
Sbjct: 424 ETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSSLIQQALEEHLTIL 483
Query: 551 DYSCSQERDKQKTIWLQTCIEEFK---------------------SNPK--WVVPALRQI 587
+ + ++ K ++ CIE+ K +NP+ WVVPALRQ+
Sbjct: 484 SDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNNPQFVWVVPALRQL 542
Query: 588 KDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQI 643
+I +RS Q SII L KN ++ L+T +L + ++
Sbjct: 543 HEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLIACHRL 585
Query: 644 SSFNGKMNALNEVNKVIAGVAY--YPHRH-------------------PEEEW--LTPDR 680
++ L V Y Y H +E W L +
Sbjct: 586 AAAVAGPGGLTGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRAKEIWECLVTGQ 645
Query: 681 QLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNADL----------- 720
+ E + CFE F K + E + +LK++ + ++ +L
Sbjct: 646 DVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFNLFKTFFENVNLC 705
Query: 721 ------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEVS-THLGPKLQSSL 760
IG +++W++ + + E+IA AI L+ S +L P+L+
Sbjct: 706 DHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSYINLNPRLKKDS 765
Query: 761 TQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 766 VSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 811
>gi|348556582|ref|XP_003464100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Cavia
porcellus]
Length = 2532
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 236/894 (26%), Positives = 392/894 (43%), Gaps = 178/894 (19%)
Query: 9 SSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKA 68
SS + ++ E +C G +FP L L+S++ + W +P E+ L + A
Sbjct: 16 SSGPQVEENWEKNDENGNCS-GEGIEFPTTNLYELESRVLTDHWSIPYKREESLGKCLLA 74
Query: 69 AIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIV 128
+ L + E C+RF + +F K+LT AVH W IH IYN L+EL+
Sbjct: 75 STYLARLGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVA 134
Query: 129 LKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKN 185
++ QD P LL +LTM FNP N++H F + + + +FA P+ ++
Sbjct: 135 ERIKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVSPVSTFQK 193
Query: 186 Q-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYF 244
+ GW+VDL+N FG +GGF + + ++ + + + AL++P G EYL +
Sbjct: 194 EPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELAAVSALVQPLGVCAEYLNSSVV---- 248
Query: 245 MPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILE 304
P+L+ P IL + D +E +K +L++ +PE+L
Sbjct: 249 QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS-----------IPELLS 284
Query: 305 NLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISS 364
+ KLL R Q D V ++ RL I+LR+L+
Sbjct: 285 AI-------------------------KLLCMRF--QPDLVTIVDDLRLDILLRMLKSPH 317
Query: 365 FNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYV 424
F+ KMN+L EV K+I + + DR+ W+ +N+VL I L ++ Q QY
Sbjct: 318 FSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYC 374
Query: 425 EKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFV 484
++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+ QL+HLFV
Sbjct: 375 DRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFV 432
Query: 485 CFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALA 544
Q SW + + + +KLL LI R+ + + + KVL++ W LAH + + +++QAL
Sbjct: 433 LIQKSWETESDRVRQKLLSLIGRIGREARLETTSGKVLDVLWELAHLPTLPSSLIQQALE 492
Query: 545 SHLKIL-DYSCSQERDKQKTIWLQTCIEEFK---------------------SNPK--WV 580
HL IL D +E K+ ++ CIE+ K +NP+ WV
Sbjct: 493 EHLTILSDAYAVKEAIKRN--YIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNNPQFVWV 550
Query: 581 VPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNN 636
VPALRQ+ +I +RS Q SII L KN ++ L+T +
Sbjct: 551 VPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGS 593
Query: 637 LCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH-------------------PEEEW 675
L + ++++ L V V Y Y H +E W
Sbjct: 594 LIACHRLAAAVAGPGGLTGVTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRAKEIW 653
Query: 676 --LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNADL---- 720
L + + E + CFE F K + E + +LK++ + ++ +L
Sbjct: 654 ECLVTGQDVCELDRELCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFNLFKTF 713
Query: 721 -------------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEVS-THLG 753
IG +++W++ + + E+IA AI L+ S +L
Sbjct: 714 FENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSYINLN 773
Query: 754 PKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 774 PRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 826
>gi|397488047|ref|XP_003815086.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Pan paniscus]
Length = 2621
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 235/900 (26%), Positives = 395/900 (43%), Gaps = 182/900 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 98 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 150
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 151 LGKCLLASTYLARLGLSESDENCRRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 210
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 211 LLIELVAERIKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVS 269
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + ++ + + + ALI+P G EYL
Sbjct: 270 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNS 328
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 329 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 361
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 362 -IPELL-------------------------SAVKLLCMRF--QPDLVTIVDDLRLDILL 393
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 394 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 450
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 451 IDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSD 508
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 509 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSS 568
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SN 576
+++QAL HL IL + + ++ K ++ CIE+ K +N
Sbjct: 569 LIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNN 627
Query: 577 PK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLI 630
P+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 628 PQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIV 670
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH------------------ 670
L+T +L + ++++ L+ V Y Y H
Sbjct: 671 KLVTGSLIACHRLAAAVAGPGGLSGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWN 730
Query: 671 -PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNA 718
+E W L + + E + CFE F K + E + +LK++ + ++
Sbjct: 731 RAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGF 790
Query: 719 DL-----------------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEV 748
+L IG +++W++ + + E+IA AI L+
Sbjct: 791 NLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINY 850
Query: 749 S-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 851 SYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 909
>gi|260064009|ref|NP_056121.2| ubiquitin carboxyl-terminal hydrolase 24 [Homo sapiens]
gi|212276491|sp|Q9UPU5.3|UBP24_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 24; AltName:
Full=Deubiquitinating enzyme 24; AltName: Full=Ubiquitin
thioesterase 24; AltName:
Full=Ubiquitin-specific-processing protease 24
Length = 2620
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 235/900 (26%), Positives = 395/900 (43%), Gaps = 182/900 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 97 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 149
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 150 LGKCLLASTYLARLGLSESDENCRRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 209
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 210 LLIELVAERIKQDPIPTGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVS 268
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + ++ + + + ALI+P G EYL
Sbjct: 269 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNS 327
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 328 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 360
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 361 -IPELL-------------------------SAVKLLCMRF--QPDLVTIVDDLRLDILL 392
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 393 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 449
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 450 IDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSD 507
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 508 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSS 567
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SN 576
+++QAL HL IL + + ++ K ++ CIE+ K +N
Sbjct: 568 LIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNN 626
Query: 577 PK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLI 630
P+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 627 PQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIV 669
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH------------------ 670
L+T +L + ++++ L+ V Y Y H
Sbjct: 670 KLVTGSLIACHRLAAAVAGPGGLSGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWN 729
Query: 671 -PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNA 718
+E W L + + E + CFE F K + E + +LK++ + ++
Sbjct: 730 RAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGF 789
Query: 719 DL-----------------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEV 748
+L IG +++W++ + + E+IA AI L+
Sbjct: 790 NLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINY 849
Query: 749 S-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 850 SYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 908
>gi|332809164|ref|XP_513431.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Pan
troglodytes]
Length = 2560
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 233/895 (26%), Positives = 394/895 (44%), Gaps = 176/895 (19%)
Query: 7 GTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLI 66
G + ++ + + + E +C G +FP L L+S++ + W +P E+ L +
Sbjct: 36 GQTLEQIVGRMRAKNDENGNCS-GEGIEFPTTNLYELESRVLTDHWSIPYKREESLGKCL 94
Query: 67 KAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLEL 126
A+ L + E C+RF + +F K+LT AVH W IH IYN L+EL
Sbjct: 95 LASTYLARLGLSESDENCRRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIEL 154
Query: 127 IVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYY 183
+ ++ QD P LL +LTM FNP N++H F + + + +FA P+ +
Sbjct: 155 VAERIKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVSPVSTF 213
Query: 184 KNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILK 242
+ + GW+VDL+N FG +GGF + + ++ + + + ALI+P G EYL +
Sbjct: 214 QKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNSSVV-- 270
Query: 243 YFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEI 302
P+L+ P IL + D +E +K +L++ +PE+
Sbjct: 271 --QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS-----------IPEL 304
Query: 303 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQI 362
L + KLL R Q D V ++ RL I+LR+L+
Sbjct: 305 L-------------------------SAVKLLCMRF--QPDLVTIVDDLRLDILLRMLKS 337
Query: 363 SSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQ 422
F+ KMN+L EV K+I + + DR+ W+ +N+VL I L ++ Q Q
Sbjct: 338 PHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQ 394
Query: 423 YVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHL 482
Y ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+ QL+HL
Sbjct: 395 YCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHL 452
Query: 483 FVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQA 542
FV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + + +++QA
Sbjct: 453 FVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSSLIQQA 512
Query: 543 LASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SNPK--W 579
L HL IL + + ++ K ++ CIE+ K +NP+ W
Sbjct: 513 LEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNNPQFVW 571
Query: 580 VVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITN 635
VVPALRQ+ +I +RS Q SII L KN ++ L+T
Sbjct: 572 VVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTG 614
Query: 636 NLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH-------------------PEEE 674
+L + ++++ L+ V Y Y H +E
Sbjct: 615 SLIACHRLAAAVAGPGGLSGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRAKEI 674
Query: 675 W--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNADL--- 720
W L + + E + CFE F K + E + +LK++ + ++ +L
Sbjct: 675 WECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFNLFKT 734
Query: 721 --------------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEVS-THL 752
IG +++W++ + + E+IA AI L+ S +L
Sbjct: 735 FFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSYINL 794
Query: 753 GPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 795 NPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 848
>gi|297465674|ref|XP_002704027.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 24 [Bos taurus]
gi|297473139|ref|XP_002686434.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Bos taurus]
gi|296489115|tpg|DAA31228.1| TPA: ubiquitin specific peptidase 24 [Bos taurus]
Length = 2617
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 234/900 (26%), Positives = 394/900 (43%), Gaps = 182/900 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 94 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 146
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 147 LGKCLLASTYLARLGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 206
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 207 LLIELVAERIKQDPIPTGLLAVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVS 265
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + ++ + + + AL++P G EYL
Sbjct: 266 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNS 324
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 325 SVV----QPMLD--PVILNTIQDVRSVEEKD-----------LKDKRLVS---------- 357
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 358 -IPELL-------------------------SAIKLLCMRF--QPDLVTVVDDLRLDILL 389
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 390 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 446
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 447 IDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSD 504
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 505 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSS 564
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SN 576
+++QAL HL IL + + ++ K ++ CIE+ K +N
Sbjct: 565 LIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLDKNKKDGFKSSQINN 623
Query: 577 PK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLI 630
P+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 624 PQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIV 666
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH------------------ 670
L+T +L + ++++ L V Y Y H
Sbjct: 667 KLVTGSLIACHRLAAAVAGPGGLTGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWN 726
Query: 671 -PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNA 718
+E W L + + E + CFE F K + E + +LK++ + ++
Sbjct: 727 RAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGF 786
Query: 719 DL-----------------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEV 748
+L IG +++W++ + + E+IA AI L+
Sbjct: 787 NLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINY 846
Query: 749 S-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 847 SYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 905
>gi|410921066|ref|XP_003974004.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Takifugu
rubripes]
Length = 2581
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 242/892 (27%), Positives = 384/892 (43%), Gaps = 180/892 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + D+ S E +C G +FP L L+S++ + W +P E+
Sbjct: 82 PPP-----AYHDVVDSERSNDENGNCSGGIM-EFPTTNLYELESRVFTDHWSIPYKREES 135
Query: 62 L-ECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNC 120
L +CLI A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 136 LGKCLI-ASTCLARHGLAEADENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNML 194
Query: 121 QKLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQ--QSISVPVNSNIADDEIF 176
L+EL+ ++ QD P L+ +LTM FNP N++H N + Q V + A+
Sbjct: 195 MLLVELVAERVKQDPVPVNLMGVLTMAFNPDNEYHFKNRMKTCQRNWAEVFGDEANMFAI 254
Query: 177 ARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLT 236
+ Y K GWLVDL+N FG +GGF + + N + I + AL++P G EYL
Sbjct: 255 SPSNSYQKEPHGWLVDLVNRFGELGGFTAIQAKL-NADEIEIASVSALVQPLGVSAEYLN 313
Query: 237 LPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDT 296
+ P++ H+ T
Sbjct: 314 SSLVQPMLDPVI-------------------------------------------HKMIT 330
Query: 297 EIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKII 356
+ +NL +++LK + + +I ++ + KLL R Q + V ++ RL +
Sbjct: 331 YV-----QNLEEKDLK-----DKRLVSIPDLLSAIKLLCMRF--QRELVTVVDDLRLDTL 378
Query: 357 LRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRD 416
LR+L+ F+ KMN+L EV K+I + + D++ W+ +N+VL I L
Sbjct: 379 LRMLKTPHFSTKMNSLKEVTKLIEESTV---SKTVKNAIDTDKLLDWLVENSVLSIALEG 435
Query: 417 SLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSP 476
++ Q QY E+++ I+ L + LSL +L +W QAG+ +++N+H ++A A FS
Sbjct: 436 NIDQAQYCERIKGIIELLGSK--LSLDELSKIWRIQAGQSSTVIENIHTIIAAAAVKFSF 493
Query: 477 VQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMT 536
QL HLFV Q SW + + +KLL LI R+ + + KVL + W LAH + T
Sbjct: 494 DQLTHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSETTTGKVLEVLWELAHLPTLPT 553
Query: 537 DIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK-----SNPK--WVVPALRQIKD 589
+++QAL HL IL + + ++ K ++ CIE+ K S+P+ WVVPALRQ+ +
Sbjct: 554 TLVQQALEEHLGILSDAYAV-KETVKRNYIIKCIEDIKKASQQSSPQAVWVVPALRQLHE 612
Query: 590 ICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQISS 645
I +RS Q SII L KN ++ LIT +L +++
Sbjct: 613 I-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLITGSLVCCHRLAV 655
Query: 646 FNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQ-----LTESGL------------- 687
G N L +G R+ +E+L + L E+ L
Sbjct: 656 TAGGNNGL-------SGSTLVDGRYTYQEYLDSHLRFLAFFLQEASLYLVWNRAKELWEC 708
Query: 688 -------------KCFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNADLI----- 721
CFE F K + E + +LK++ + ++ +L
Sbjct: 709 LVSGPDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLEPYEITMNGFNLFKTFFE 768
Query: 722 ------------GAEYLWRVITNAGEDIAFR-------------AIDLLKEVS-THLGPK 755
G + + AG D +R AI L+ S T+L PK
Sbjct: 769 NVNLCDHRLKRQGTQLCVERLDLAGMDFIWRIAMESPDEEIANEAIQLIITYSYTNLNPK 828
Query: 756 LQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
++ HK FIA+C RL A +G T + +A ++ TA A +
Sbjct: 829 MKKDSVSLHKKFIADCYKRLEAASSALG-GPTLTHAVTKATKMLTATAMPTV 879
>gi|431896929|gb|ELK06193.1| Ubiquitin carboxyl-terminal hydrolase 24 [Pteropus alecto]
Length = 2563
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 232/888 (26%), Positives = 390/888 (43%), Gaps = 177/888 (19%)
Query: 14 ISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELC 73
+ ++ + + G G G +FP L L+S++ + W +P E+ L + A+ L
Sbjct: 34 VDETEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLA 91
Query: 74 KTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQ 133
+ E C+RF + +F K+LT AVH W IH IYN L+EL+ ++ Q
Sbjct: 92 RLGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQ 151
Query: 134 DVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGW 189
D P LL +LTM FNP N++H F + + + +FA PI ++ + GW
Sbjct: 152 DPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAISPISTFQKEPHGW 210
Query: 190 LVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILE 249
+VDL+N FG +GGF + + ++ + + + AL++P G EYL + P+L+
Sbjct: 211 VVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNSSVV----QPMLD 265
Query: 250 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDE 309
P IL + D +E +K +L++ +PE+L
Sbjct: 266 --PVILTTIQDVRSVEEKD-----------LKDKRLVS-----------IPELL------ 295
Query: 310 ELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKM 369
+ KLL R Q D V ++ RL I+LR+L+ F+ KM
Sbjct: 296 -------------------SAIKLLCMRF--QPDLVTVVDDLRLDILLRMLKSPHFSAKM 334
Query: 370 NALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEK 429
N+L EV K+I + + DR+ W+ +N+VL I L ++ Q QY ++++
Sbjct: 335 NSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKG 391
Query: 430 ILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQAS 489
I+ L + LSL +L +W Q+G+ +++N+H ++A A F+ QL+HLFV Q S
Sbjct: 392 IIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQKS 449
Query: 490 WTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKI 549
W + + + +KLL LI R+ + + + KVL++ W LAH + + +++QAL HL I
Sbjct: 450 WETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSSLIQQALDEHLTI 509
Query: 550 LDYSCSQERDKQKTIWLQTCIEEFK---------------------SNPK--WVVPALRQ 586
L + + ++ K ++ CIE+ K +NP+ WVVPALRQ
Sbjct: 510 LSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSSLEKNKKDGFKSSQLNNPQFVWVVPALRQ 568
Query: 587 IKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQ 642
+ +I +RS Q SII L KN ++ L+T +L + +
Sbjct: 569 LHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLIACHR 611
Query: 643 ISSFNGKMNALNEVNKVIAGVAY--YPHRH-------------------PEEEW--LTPD 679
+++ L V Y Y H +E W L
Sbjct: 612 LAAAMAGPGGLTGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRAKEIWECLVTG 671
Query: 680 RQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNADL---------- 720
+ + E + CFE F K + E + +LK++ + ++ +L
Sbjct: 672 QDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFNLFKTFFENVNL 731
Query: 721 -------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEVS-THLGPKLQSS 759
IG +++W++ + + E+IA AI L+ S +L P+L+
Sbjct: 732 CDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSYINLNPRLKKD 791
Query: 760 LTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 792 SVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 838
>gi|332232144|ref|XP_003265264.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Nomascus
leucogenys]
Length = 2572
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 236/903 (26%), Positives = 395/903 (43%), Gaps = 183/903 (20%)
Query: 6 PGTSSDKD-------ISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLP 58
PG SS+ + + + E +C G +FP L L+S++ + W +P
Sbjct: 28 PGLSSEMGRQTLQHIVGRMRAKNDENGNCS-GEGIEFPTTNLYELESRVLTDHWSIPYKR 86
Query: 59 EQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYN 118
E+ L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 87 EESLGKCLLASTYLARLGLSESDENCRRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYN 146
Query: 119 NCQKLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIF 176
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +F
Sbjct: 147 MLMLLIELVAERIKQDPIPVGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMF 205
Query: 177 A-RPIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEY 234
A P+ ++ + GW+VDL+N FG +GGF + + ++ + + + ALI+P G EY
Sbjct: 206 AVSPVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEY 264
Query: 235 LTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQE 294
L + P+L+ P IL + D +E +K +L++
Sbjct: 265 LNSSVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS------- 300
Query: 295 DTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLK 354
+PE+L + KLL R Q D V ++ RL
Sbjct: 301 ----IPELLSAI-------------------------KLLCMRF--QPDLVTIVDDLRLD 329
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
I+LR+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L
Sbjct: 330 ILLRMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIAL 386
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
++ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F
Sbjct: 387 EGNIDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKF 444
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDV 534
+ QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH +
Sbjct: 445 NSDQLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTL 504
Query: 535 MTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK-------------------- 574
+ +++QAL HL IL + + ++ K ++ CIE+ K
Sbjct: 505 PSSLIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQ 563
Query: 575 -SNPK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNH 627
+NP+ WVVPALRQ+ +I +RS Q SII L KN
Sbjct: 564 LNNPQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNF 606
Query: 628 SLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH--------------- 670
++ L+T +L + ++++ L+ V Y Y H
Sbjct: 607 EIVKLVTGSLIACHRLAAAVAGPGGLSGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYL 666
Query: 671 ----PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLL 715
+E W L + + E + CFE F K + E + +LK++ + +
Sbjct: 667 GWNRAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITM 726
Query: 716 DNADL-----------------------------IGAEYLWRV-ITNAGEDIAFRAIDLL 745
+ +L IG +++W++ + + E+IA AI L+
Sbjct: 727 NGFNLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLI 786
Query: 746 KEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQ 804
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A
Sbjct: 787 INYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAM 845
Query: 805 EAI 807
+
Sbjct: 846 PTV 848
>gi|348504484|ref|XP_003439791.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Oreochromis
niloticus]
Length = 2585
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 241/895 (26%), Positives = 390/895 (43%), Gaps = 186/895 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + D+ S E +C G + +FP L L+S++ + W +P E+
Sbjct: 82 PPP-----AYHDVVDSERSNDENGNCSGG-SMEFPTTNLYELESRVFTDHWSIPYKREES 135
Query: 62 L-ECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNC 120
L +CLI ++ +D D E C+RF + +F K+LT AVH W IH IYN
Sbjct: 136 LGKCLIASSCLARHGLADAD-ENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNML 194
Query: 121 QKLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD-EIFA 177
L+EL+ ++ QD P L+ +LTM NP N++H F + ++ D+ +FA
Sbjct: 195 MLLVELVAERVKQDPVPVNLMGVLTMALNPDNEYH-FKNRMKACQRNWAEVFGDEANMFA 253
Query: 178 -RPIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYL 235
P + Y+ + GWLVDL+N FG +GGF + + N + I + AL++P G EYL
Sbjct: 254 VSPSNTYQKEPHGWLVDLVNRFGELGGFTAIQTKL-NTEEIEIAYVSALVQPLGVCAEYL 312
Query: 236 TLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQED 295
+ P++ H+
Sbjct: 313 NSSLVQPMLDPVI-------------------------------------------HKMI 329
Query: 296 TEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKI 355
T + +NL +++LK + + +I ++ + KLL R Q + V ++ RL
Sbjct: 330 TYV-----QNLEEKDLK-----DKRLVSIPDLLSAIKLLCMRF--QRELVTVVDDLRLDT 377
Query: 356 ILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLR 415
+LR+L+ F+ KMN+L EV K+I + + D++ W+ +N+VL I L
Sbjct: 378 LLRMLKTPHFSTKMNSLKEVTKLIEESTV---SKSVKNAIDTDKLLDWLVENSVLSIALE 434
Query: 416 DSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFS 475
++ Q QY E+++ I+ L + LSL +L +W QAG+ +++N+H ++A A FS
Sbjct: 435 GNIDQAQYCERIKGIIELLGSK--LSLDELSKIWRIQAGQSSTVIENIHTIIAAAAVKFS 492
Query: 476 PVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVM 535
QL HLFV Q SW + + +KLL LI R+ + + KVL + W LAH +
Sbjct: 493 FDQLTHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSETTTGKVLEVLWELAHLPTLP 552
Query: 536 TDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK-----SNPK--WVVPALRQIK 588
T +++QAL HL IL + + ++ K ++ CIE+ K S+P+ WVVPALRQ+
Sbjct: 553 TSLVQQALEEHLGILSDAYAV-KELVKRSYIIKCIEDIKKASQQSSPQAVWVVPALRQLH 611
Query: 589 DICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNL--CSLLQ 642
+I +RS Q SII L KN ++ LIT +L C L
Sbjct: 612 EI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLITGSLVCCHRLA 654
Query: 643 ISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQ-----LTESGL---------- 687
+++ N ++G R+ +E+L + L E+ L
Sbjct: 655 VTAAG---------NSGLSGSTLVDGRYTYQEYLDSHLRFLAFFLQEASLYLVWNRAKEL 705
Query: 688 ----------------KCFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNADLI-- 721
CFE F K + E + +LK++ + ++ +L
Sbjct: 706 WECLVSGPDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLEPYEITMNGFNLFKT 765
Query: 722 ---------------GAEYLWRVITNAGEDIAFR-------------AIDLLKEVS-THL 752
G + + AG D +R AI L+ S T+L
Sbjct: 766 FFENVNLCDHRLKRQGTQLCVERLDLAGMDFIWRIAMETPDEEIANEAIQLIITYSYTNL 825
Query: 753 GPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
PK++ HK FIA+C RL A +G T + +A ++ TA A +
Sbjct: 826 NPKMKKDSVSLHKKFIADCYKRLEAASSALG-GPTLTHAVTKATKMLTATAMPTV 879
>gi|281351958|gb|EFB27542.1| hypothetical protein PANDA_019245 [Ailuropoda melanoleuca]
Length = 2492
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 231/877 (26%), Positives = 385/877 (43%), Gaps = 176/877 (20%)
Query: 24 GTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEP 83
G G G +FP L L+S++ + W +P E+ L + A+ L + E
Sbjct: 7 GNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLARLGLSESDEN 64
Query: 84 CQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLDI 141
C+RF + +F K+LT AVH W IH IYN L+EL+ ++ QD P LL +
Sbjct: 65 CKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPTGLLGV 124
Query: 142 LTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWLVDLINLFGS 199
LTM FNP N++H F + + + +FA P+ ++ + GW+VDL+N FG
Sbjct: 125 LTMAFNPDNEYH-FKNRMKVSQRNWTEVFGEGNMFAVSPVSTFQKEPHGWVVDLVNKFGE 183
Query: 200 MGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLT 259
+GGF + + ++ + + + AL++P G EYL + P+L+ P IL +
Sbjct: 184 LGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNSSVV----QPMLD--PVILTTIQ 236
Query: 260 DEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNES 319
D +E +K +L++ +PE+L
Sbjct: 237 DVRSVEEKD-----------LKDKRLVS-----------IPELL---------------- 258
Query: 320 KNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVI 379
+ KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV K+I
Sbjct: 259 ---------SAIKLLCMRF--QPDLVTVVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLI 307
Query: 380 AGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKA 439
+ + DR+ W+ +N+VL I L ++ Q QY ++++ I+ L +
Sbjct: 308 EDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSK-- 362
Query: 440 LSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTE 499
LSL +L +W Q+G+ +++N+H ++A A F+ QL+HLFV Q SW + + + +
Sbjct: 363 LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQKSWETESDRVRQ 422
Query: 500 KLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERD 559
KLL LI R+ + + + KVL++ W LAH + + +++QAL HL IL + + ++
Sbjct: 423 KLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSSLIQQALEEHLTILSDAYAV-KE 481
Query: 560 KQKTIWLQTCIEEFK--------------------SNPK--WVVPALRQIKDICCLYEPG 597
K ++ CIE+ K +NP+ WVVPALRQ+ +I
Sbjct: 482 AIKRSYIIKCIEDIKRPGEWSGLEKKKDGFKSSQLNNPQFVWVVPALRQLHEI------- 534
Query: 598 QNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNAL 653
+RS Q SII L KN ++ L+T +L + ++++ L
Sbjct: 535 ----------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLIACHRLAAAVAGPGGL 584
Query: 654 NEVNKVIAGVAY--YPHRH-------------------PEEEW--LTPDRQLTESGLK-C 689
V Y Y H +E W L + + E + C
Sbjct: 585 TGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRAKEIWECLVTGQDVCELDREMC 644
Query: 690 FEKFFKSVNIGEGKL--------VLKVKKRSLLLDNADL--------------------- 720
FE F K + E + +LK++ + ++ +L
Sbjct: 645 FEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFNLFKTFFENVNLCDHRLKRQGAQ 704
Query: 721 --------IGAEYLWRV-ITNAGEDIAFRAIDLLKEVS-THLGPKLQSSLTQFHKTFIAE 770
IG +++W++ + + E+IA AI L+ S +L P+L+ HK FIA+
Sbjct: 705 LYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSYINLNPRLKKDSVSLHKKFIAD 764
Query: 771 CLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
C RL A +G T + A ++ TA A +
Sbjct: 765 CYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 800
>gi|432853655|ref|XP_004067815.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Oryzias
latipes]
Length = 2542
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 241/885 (27%), Positives = 385/885 (43%), Gaps = 167/885 (18%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + D+ + E +C G + +FP L L+S++ + W +P E+
Sbjct: 82 PPP-----AYHDVVEGERSNDENGNCS-GGSMEFPTTNLYELESRVFTDHWSIPYKREES 135
Query: 62 L-ECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNC 120
L +CLI + +D D E C+RF + +F K+LT AVH W IH IYN
Sbjct: 136 LGKCLIASTCLARHGLADAD-ENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNML 194
Query: 121 QKLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD-EIFA 177
L+EL+ ++ QD P L+ +LTM NP N++H F + ++ D+ +FA
Sbjct: 195 MLLVELVAERVKQDPVPVNLMGVLTMALNPDNEYH-FKNRMKACQRNWAEVFGDEANMFA 253
Query: 178 -RPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLT 236
P Y K GWLVDL+N FG +GGF + + N + I + AL++P G EYL
Sbjct: 254 VSPNTYQKEPHGWLVDLVNRFGELGGFTAIQTKL-NSEEVEIASVSALVQPLGVCAEYLN 312
Query: 237 LPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDT 296
+ P++ + ++NL +++L K +L++
Sbjct: 313 SSLVQPMLDPVIHKMITYVQNLEEKDL-----------------KDKRLVS--------- 346
Query: 297 EIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKII 356
+PE+L + KLL R Q + V ++ RL +
Sbjct: 347 --IPELL-------------------------SAIKLLCMRF--QRELVAVVDDLRLDTL 377
Query: 357 LRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRD 416
LR+L+ F+ KMN+L EV K+I + + D++ W+ +N+VL I L
Sbjct: 378 LRMLKTPHFSTKMNSLKEVTKLIEESTV---SKSVKNAIDTDKLLDWLVENSVLSIALEG 434
Query: 417 SLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSP 476
++ Q QY E+++ I+ L + LSL +L +W QAG+ +++N+H ++A A FS
Sbjct: 435 NIDQAQYCERIKGIIELLGSK--LSLDELSKIWKIQAGQSSTVIENIHTIIAAAAAKFSF 492
Query: 477 VQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMT 536
QL HLF+ Q SW + + +KLL LI R+ + + KVL + W LAH + T
Sbjct: 493 DQLTHLFILIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLEVLWELAHLPTLPT 552
Query: 537 DIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK-----SNPK--WVVPALRQIKD 589
+++QAL HL IL + + ++ K ++ CIE+ K S+P+ WVVPALRQ+ +
Sbjct: 553 SLVQQALEEHLGILSDAYAV-KETVKRSYIIKCIEDIKKASQQSSPQAVWVVPALRQLHE 611
Query: 590 ICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQISS 645
I +RS Q SII L KN ++ LIT +L +++
Sbjct: 612 I-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLITGSLVCCHRLAV 654
Query: 646 FNGKMNALNEVNKVIAGVAY--YPHRH-------------------PEEEW--LTPDRQL 682
N L+ V Y Y H +E W L +
Sbjct: 655 TASGNNGLSSSTLVDGRYTYQEYLDSHLRFLAFFLQEASLYLVWNRAKELWECLVSGADV 714
Query: 683 TESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNADLI------------ 721
E + CFE F K + E + +LK++ + ++ +L
Sbjct: 715 CELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLEPYEITMNGFNLFKTFFENVNLCDH 774
Query: 722 -----GAEYLWRVITNAGEDIAFR-------------AIDLLKEVS-THLGPKLQSSLTQ 762
G + + AG D +R AI L+ S T+L PK++
Sbjct: 775 RLKRQGTQLCVERLDLAGMDFLWRIAMETPDEEIANEAIQLIITYSYTNLNPKMKKDSVS 834
Query: 763 FHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
HK FIA+C RL A +G T + +A ++ TA A +
Sbjct: 835 LHKKFIADCYKRLEAASSALG-GPTLTHAVTKATKMLTATAMPTV 878
Score = 39.3 bits (90), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 795 ARQIWTALAQEA-IFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
A+++W L A + DRE CF+WF+K + DL+ + + F++ +L EP
Sbjct: 701 AKELWECLVSGADVCELDREMCFEWFTK---GQHDLESDVQQQLFKEKILKLEP 751
>gi|440895008|gb|ELR47312.1| Ubiquitin carboxyl-terminal hydrolase 24, partial [Bos grunniens
mutus]
Length = 2511
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 231/878 (26%), Positives = 384/878 (43%), Gaps = 177/878 (20%)
Query: 24 GTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEP 83
G G G +FP L L+S++ + W +P E+ L + A+ L + E
Sbjct: 7 GNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLARLGLSESDEN 64
Query: 84 CQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLDI 141
C+RF + +F K+LT AVH W IH IYN L+EL+ ++ QD P LL +
Sbjct: 65 CKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPTGLLAV 124
Query: 142 LTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWLVDLINLFGS 199
LTM FNP N++H F + + + +FA P+ ++ + GW+VDL+N FG
Sbjct: 125 LTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVSPVSTFQKEPHGWVVDLVNKFGE 183
Query: 200 MGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLT 259
+GGF + + ++ + + + AL++P G EYL + P+L+ P IL +
Sbjct: 184 LGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNSSVV----QPMLD--PVILNTIQ 236
Query: 260 DEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNES 319
D +E +K +L++ +PE+L
Sbjct: 237 DVRSVEEKD-----------LKDKRLVS-----------IPELL---------------- 258
Query: 320 KNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVI 379
+ KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV K+I
Sbjct: 259 ---------SAIKLLCMRF--QPDLVTVVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLI 307
Query: 380 AGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKA 439
+ + DR+ W+ +N+VL I L ++ Q QY ++++ I+ L
Sbjct: 308 EDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELL--GSK 362
Query: 440 LSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTE 499
LSL +L +W Q+G+ +++N+H ++A A F+ QL+HLFV Q SW + + + +
Sbjct: 363 LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQKSWETESDRVRQ 422
Query: 500 KLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERD 559
KLL LI R+ + + + KVL++ W LAH + + +++QAL HL IL + + ++
Sbjct: 423 KLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSSLIQQALEEHLTILSDAYAV-KE 481
Query: 560 KQKTIWLQTCIEEFK---------------------SNPK--WVVPALRQIKDICCLYEP 596
K ++ CIE+ K +NP+ WVVPALRQ+ +I
Sbjct: 482 AIKRSYIIKCIEDIKRPGEWSGLDKNKKDGFKSSQINNPQFVWVVPALRQLHEI------ 535
Query: 597 GQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNA 652
+RS Q SII L KN ++ L+T +L + ++++
Sbjct: 536 -----------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLIACHRLAAAVAGPGG 584
Query: 653 LNEVNKVIAGVAY--YPHRH-------------------PEEEW--LTPDRQLTESGLK- 688
L V Y Y H +E W L + + E +
Sbjct: 585 LTGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRAKEIWECLVTGQDVCELDREM 644
Query: 689 CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNADL-------------------- 720
CFE F K + E + +LK++ + ++ +L
Sbjct: 645 CFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFNLFKTFFENVNLCDHRLKRQGA 704
Query: 721 ---------IGAEYLWRV-ITNAGEDIAFRAIDLLKEVS-THLGPKLQSSLTQFHKTFIA 769
IG +++W++ + + E+IA AI L+ S +L P+L+ HK FIA
Sbjct: 705 QLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSYINLNPRLKKDSVSLHKKFIA 764
Query: 770 ECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
+C RL A +G T + A ++ TA A +
Sbjct: 765 DCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 801
>gi|344278648|ref|XP_003411105.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Loxodonta
africana]
Length = 2619
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 236/905 (26%), Positives = 400/905 (44%), Gaps = 192/905 (21%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + +W +P E+
Sbjct: 96 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDQWSIPYKREES 148
Query: 62 L-ECLIK----AAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCI 116
L +CL+ A + LC+++ E C+RF + +F K+LT AVH W IH I
Sbjct: 149 LGKCLLASTYLARLGLCESD-----ENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGI 203
Query: 117 YNNCQKLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDE 174
YN L+EL+ ++ QD P LL +LTM FNP N++H F + + +
Sbjct: 204 YNMLMLLIELVAERIKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGN 262
Query: 175 IFA-RPIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVH 232
FA P+ ++ + GW+VDL+N FG +GGF + + ++ + + + AL++P G
Sbjct: 263 TFAISPVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCA 321
Query: 233 EYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPH 292
EYL + P+L+ P IL + D +E +K +L++
Sbjct: 322 EYLNSSVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS----- 359
Query: 293 QEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFR 352
+PE+L + KLL + Q D V ++ R
Sbjct: 360 ------IPELL-------------------------SAIKLLCMQF--QPDLVTVVDDLR 386
Query: 353 LKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEI 412
L I+LR+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I
Sbjct: 387 LDILLRMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSI 443
Query: 413 VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAW 472
L ++ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A
Sbjct: 444 ALEGNIDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHSIIAAAAV 501
Query: 473 DFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSD 532
F+ QL+HLFV Q SW + + +KLL LI R+ + + + KVL++ W LAH
Sbjct: 502 KFNSDQLNHLFVLIQKSWEIESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLP 561
Query: 533 DVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK------------------ 574
+ + +++QAL HL IL + + + +K+ ++ CIE+ K
Sbjct: 562 TLPSSLIQQALEEHLTILSDAYAVKETIKKS-YIVKCIEDIKRPGEWTSLDKNKKDGFKS 620
Query: 575 ---SNPK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIK 625
+NP+ WVVPALRQ+ +I +RS Q SII L K
Sbjct: 621 SQLNNPQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKK 663
Query: 626 NHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH------------- 670
N ++ L+T +L + ++++ L V Y Y H
Sbjct: 664 NFEIVKLVTGSLIACHRLAAAVAGPGGLTGSTLVDGRYTYREYLEAHLKFLAFFLQEATL 723
Query: 671 ------PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSL 713
+E W L + + E + CFE F K + E + +LK++ +
Sbjct: 724 YLGWNRAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEI 783
Query: 714 LLDNADL-----------------------------IGAEYLWRV-ITNAGEDIAFRAID 743
++ +L IG +++W++ + + E+IA AI
Sbjct: 784 TMNGFNLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQ 843
Query: 744 LLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTAL 802
L+ S +L P+L+ HK FIA+C RL A +G T + A ++ TA
Sbjct: 844 LIISYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTAT 902
Query: 803 AQEAI 807
A +
Sbjct: 903 AMPTV 907
>gi|338721670|ref|XP_001915653.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Equus
caballus]
Length = 2577
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 234/888 (26%), Positives = 387/888 (43%), Gaps = 178/888 (20%)
Query: 15 SQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCK 74
S S E +C G +FP L L+S++ + W +P E+ L + A+ L +
Sbjct: 141 SSSGDKNDENGNCS-GEGIEFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLAR 199
Query: 75 TNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQD 134
E C+RF + +F K+LT AVH W IH IYN L+EL ++ QD
Sbjct: 200 LGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGSEIHEGIYNMLMLLVELAAERIKQD 259
Query: 135 VFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWL 190
P LL +LTM FNP N++H F + ++ + +FA P+ ++ + GW+
Sbjct: 260 PVPVGLLAVLTMAFNPDNEYH-FKNRMKASQRNWAEVFGEGNVFAVSPVSAFQKEPHGWV 318
Query: 191 VDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEI 250
VDL+N FG +GGF + + ++ + + + AL++P G EYL + P+L+
Sbjct: 319 VDLVNKFGELGGFAAIQAKLHSED-VELGAVSALVQPLGVCAEYLNASVV----QPMLD- 372
Query: 251 VPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEE 310
P IL + D +E +K +L++ +PE+L +
Sbjct: 373 -PVILTTIQDVRSVEEKD-----------LKDKRLVS-----------IPELLSAI---- 405
Query: 311 LKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMN 370
KLL R Q D V ++ RL I+LR+L+ F+ KMN
Sbjct: 406 ---------------------KLLCMRF--QPDLVTVVDDLRLDILLRMLKSPHFSAKMN 442
Query: 371 ALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKI 430
+L EV K+I + + DR+ W+ +N+VL I L ++ Q QY ++++ I
Sbjct: 443 SLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGI 499
Query: 431 LRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASW 490
+ L + LSL +L +W Q+G+ +++N+H ++A A F+ QL+HLFV Q SW
Sbjct: 500 IELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQKSW 557
Query: 491 TSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKIL 550
+ + + +KLL LI R+ + + + KVL++ W LAH + + +++QAL HL IL
Sbjct: 558 EAESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSSLIQQALEEHLTIL 617
Query: 551 DYSCSQERDKQKTIWLQTCIEEFK---------------------SNPK--WVVPALRQI 587
+ + ++ K ++ CIE+ K +NP+ WVVPALRQ+
Sbjct: 618 SDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGVKSSQLNNPQFVWVVPALRQL 676
Query: 588 KDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQI 643
+I +RS Q SII L KN ++ L+T +L + ++
Sbjct: 677 HEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLIACHRL 719
Query: 644 SSFNGKMNALNEVNKVIAGVAY--YPHRH-------------------PEEEW----LTP 678
++ L V Y Y H +E W P
Sbjct: 720 AAAVAGPGGLTGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRAKEIWECLVTGP 779
Query: 679 DRQLTESGLKCFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNADLI--------- 721
D + + CFE F K + E + VLK++ + ++ +L
Sbjct: 780 DVCELDREM-CFEWFTKGQHDLESDVQQQLFKEKVLKLESYEITMNGFNLFKTFFENVNL 838
Query: 722 --------GAE------------YLWRV-ITNAGEDIAFRAIDLLKEVS-THLGPKLQSS 759
GA+ ++W++ + + E+IA AI L+ S +L P+L+
Sbjct: 839 CDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSYINLNPRLKKD 898
Query: 760 LTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 899 SVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 945
>gi|326925422|ref|XP_003208914.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Meleagris
gallopavo]
Length = 2545
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 193/657 (29%), Positives = 316/657 (48%), Gaps = 101/657 (15%)
Query: 5 QPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQEL-E 63
Q TSS +I+ + + G G G +FP L L+S++ + W +P E+ L +
Sbjct: 39 QQQTSSVLNIAMKND--ENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGK 94
Query: 64 CLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKL 123
CLI A+ L + E C+RF + +F K+LT AVH W IH IYN L
Sbjct: 95 CLI-ASTYLARLGLSDSDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLL 153
Query: 124 LELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPI 180
++L+ ++ QD P LL +LTM FNP N++H F + + + + A PI
Sbjct: 154 VDLVAERVKQDPIPVGLLGVLTMAFNPDNEYH-FKNRMKVCQRNWAEVFGEGNMHAVSPI 212
Query: 181 DYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPT 239
++ + GWLVDL+N F +GGF + + N + + I AL++PFG EYL
Sbjct: 213 STFQKEPHGWLVDLVNRFAELGGFSAIQSKL-NSEDIELGAISALVQPFGVCAEYLNSSV 271
Query: 240 ILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIV 299
+ P++ + + ++N+ +++LK + +L++ +
Sbjct: 272 VQPMLDPVIHKMIKYVQNVEEKDLKDK-----------------RLVS-----------I 303
Query: 300 PEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRL 359
PE+L + KLL R Q D V ++ RL I+LR+
Sbjct: 304 PELLSGI-------------------------KLLCMRF--QPDLVTAVDDLRLDILLRM 336
Query: 360 LQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLH 419
L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L ++
Sbjct: 337 LKSPHFSAKMNSLKEVTKLIEDSTV---SKSVKNAIDTDRLLNWLVENSVLSIALEGNID 393
Query: 420 QPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQL 479
Q QY ++++ I+ L LSL +L +W Q+G+ +++N+H ++A A FS QL
Sbjct: 394 QAQYCDRIKGIIELL--GSKLSLDELTKIWRIQSGQSSTVIENIHTIIAAAAVKFSSDQL 451
Query: 480 DHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIM 539
+HLFV Q SW + + + +KLL LI R+ + + KVL + W LAH + ++
Sbjct: 452 NHLFVLIQKSWETESDRVRQKLLSLIGRIGREARVETTTGKVLEVLWELAHLPTLPCSLI 511
Query: 540 EQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK-----SNPK--WVVPALRQIKDICC 592
+QAL HL IL + + ++ K ++ CIE+ K +NP+ WVVPALRQ+ +I
Sbjct: 512 QQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRSSQHNNPQFVWVVPALRQLHEI-- 568
Query: 593 LYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQISS 645
+RS Q SII L KN ++ L+T +L S ++++
Sbjct: 569 ---------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLISCHRLAA 610
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + L ++ +LIG +++W++ + + E+IA
Sbjct: 709 EITMNGFSLFKTFFENVNLCDHRL--KRQGTQLSVEKLELIGMDFIWKIAMESPDEEIAN 766
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
AI L+ S +L P+L+ HK FIA+C RL A +G T + A ++
Sbjct: 767 EAIQLIINYSYINLTPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKM 825
Query: 799 WTALAQEAI 807
TA A +
Sbjct: 826 LTATAMPTV 834
>gi|363736657|ref|XP_422499.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Gallus gallus]
Length = 2572
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 188/649 (28%), Positives = 314/649 (48%), Gaps = 99/649 (15%)
Query: 13 DISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQEL-ECLIKAAIE 71
++ ++ + + G G G +FP L L+S++ + W +P E+ L +CLI A+
Sbjct: 97 EMVENEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLI-ASTY 153
Query: 72 LCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKL 131
L + E C+RF + +F K+LT AVH W IH IYN L++L+ ++
Sbjct: 154 LARLGLSDSDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLVDLVAERV 213
Query: 132 GQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-R 187
QD P LL +LTM FNP N++H F + + + + A PI ++ +
Sbjct: 214 KQDPIPVGLLGVLTMAFNPDNEYH-FKNRMKVCQRNWAEVFGEGNMHAVSPISTFQKEPH 272
Query: 188 GWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPI 247
GWLVDL+N F +GGF + + N + + I AL++PFG EYL + P+
Sbjct: 273 GWLVDLVNRFAELGGFSAIQSKL-NSEDIELGAISALVQPFGVCAEYLNSSVVQPMLDPV 331
Query: 248 LEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLT 307
+ + + ++N+ +++LK + +L++ +PE+L +
Sbjct: 332 IHKMIKYVQNVEEKDLKDK-----------------RLVS-----------IPELLSGI- 362
Query: 308 DEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNG 367
KLL R Q D V ++ RL I+LR+L+ F+
Sbjct: 363 ------------------------KLLCMRF--QPDLVTAVDDLRLDILLRMLKSPHFSA 396
Query: 368 KMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKL 427
KMN+L EV K+I + + DR+ W+ +N+VL I L ++ Q QY +++
Sbjct: 397 KMNSLKEVTKLIEDSTV---SKSVKNAIDTDRLLNWLVENSVLSIALEGNIDQAQYCDRI 453
Query: 428 EKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQ 487
+ I+ L + LSL +L +W Q+G+ +++N+H ++A A FS QL+HLFV Q
Sbjct: 454 KGIIELLGSK--LSLDELTKIWRIQSGQSSTVIENIHTIIAAAAVKFSSDQLNHLFVLIQ 511
Query: 488 ASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHL 547
SW + + + +KLL LI R+ + + KVL + W LAH + +++QAL HL
Sbjct: 512 KSWETESDRVRQKLLSLIGRIGREARVETTTGKVLEVLWELAHLPTLPCSLIQQALEEHL 571
Query: 548 KILDYSCSQERDKQKTIWLQTCIEEFK-----SNPK--WVVPALRQIKDICCLYEPGQNL 600
IL + + ++ K ++ CIE+ K +NP+ WVVPALRQ+ +I
Sbjct: 572 TILSDAYAV-KEAIKRSYIIKCIEDIKRSSQHNNPQFVWVVPALRQLHEI---------- 620
Query: 601 NSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQISS 645
+RS Q SII L KN ++ L+T +L S ++++
Sbjct: 621 -------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLISCHRLAA 662
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + L ++ +LIG +++W++ + + E+IA
Sbjct: 761 EITMNGFSLFKTFFENVNLCDHRL--KRQGTQLSVEKLELIGMDFIWKIAMESPDEEIAN 818
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
AI L+ S +L P+L+ HK FIA+C RL A +G T + A ++
Sbjct: 819 EAIQLIINYSYINLTPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKM 877
Query: 799 WTALAQEAI 807
TA A +
Sbjct: 878 LTATAMPTV 886
>gi|449508914|ref|XP_002194265.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Taeniopygia
guttata]
Length = 2502
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 307/638 (48%), Gaps = 99/638 (15%)
Query: 24 GTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQEL-ECLIKAAIELCKTNSDVDSE 82
G G G +FP L L+S++ + W +P E+ L +CLI A+ L + E
Sbjct: 11 GNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLI-ASTYLARLGLSDSDE 67
Query: 83 PCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLD 140
C+RF + +F K+LT AVH W IH IYN L++L+ ++ QD P LL
Sbjct: 68 NCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLVDLVAERVKQDPIPVGLLG 127
Query: 141 ILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWLVDLINLFG 198
+LTM FNP N++H F + + + + A PI ++ + GWLVDL+N F
Sbjct: 128 VLTMAFNPDNEYH-FKNRMKVCQRNWAEVFGEGNMHAVSPISTFQKEPHGWLVDLVNRFA 186
Query: 199 SMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENL 258
+GGF + + N + + I AL++PFG EYL + P++ + + ++N+
Sbjct: 187 ELGGFSAIQSKL-NSEDIELGAISALVQPFGVCAEYLNSSVVQPMLDPVIHKMIKYVQNV 245
Query: 259 TDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNE 318
+++LK + +L++ +PE+L +
Sbjct: 246 EEKDLKDK-----------------RLVS-----------IPELLSGI------------ 265
Query: 319 SKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKV 378
KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV K+
Sbjct: 266 -------------KLLCMRF--QPDLVTAVDDLRLDILLRMLKSPHFSAKMNSLKEVTKL 310
Query: 379 IAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEK 438
I + + DR+ W+ +N+VL I L ++ Q QY ++++ I+ L
Sbjct: 311 IEDSTV---SKSVKNAIDTDRLLNWLVENSVLSIALEGNIDQAQYCDRIKGIIELL--GS 365
Query: 439 ALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQT 498
LSL +L +W Q+G+ +++N+H ++A A FS QL+HLFV Q SW + + +
Sbjct: 366 KLSLDELTKIWRIQSGQSSTVIENIHTIIAAAAVKFSSDQLNHLFVLIQKSWETESDRVR 425
Query: 499 EKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQER 558
+KLL LI R+ + + KVL + W LAH + +++QAL HL IL + + +
Sbjct: 426 QKLLSLIGRIGREARVETTTGKVLEVLWELAHLPTLPCSLIQQALEEHLTILSDAYAV-K 484
Query: 559 DKQKTIWLQTCIEEFK-----SNPK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSH 611
+ K ++ CIE+ K +NP+ WVVPALRQ+ +I +RS
Sbjct: 485 EAIKRSYIIKCIEDIKRSSQHNNPQFVWVVPALRQLHEI-----------------TRSF 527
Query: 612 SSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQISS 645
Q SII L KN ++ L+T +L S ++++
Sbjct: 528 IKQTYQKQDKSIIQDLKKNFEIVKLVTGSLISCHRLAA 565
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + L ++ +LIG +++W++ + + E+IA
Sbjct: 664 EITMNGFSLFKTFFENVNLCDHRL--KRQGTQLSVEKLELIGMDFIWKIAMESPDEEIAN 721
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
AI L+ S +L P+L+ HK FIA+C RL A +G T + A ++
Sbjct: 722 EAIQLIINYSYINLTPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKM 780
Query: 799 WTALAQEAI 807
TA A +
Sbjct: 781 LTATAMPTV 789
>gi|327270846|ref|XP_003220199.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Anolis
carolinensis]
Length = 2605
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 187/660 (28%), Positives = 317/660 (48%), Gaps = 104/660 (15%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ ++ + + G G G +FP L L+S++ + W +P E+
Sbjct: 99 PPP-----AYHEVVENEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 151
Query: 62 L-ECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNC 120
L +CLI A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 152 LGKCLI-ASTYLARLGLSDSDENCRRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNML 210
Query: 121 QKLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA- 177
L++L ++ QD P LL +LTM NP N++H F + + + ++A
Sbjct: 211 MLLVDLAAERIKQDPIPVGLLAVLTMALNPDNEYH-FKNRMKVCQRNWAEVFGEGNMYAA 269
Query: 178 RPIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLT 236
PI ++ + GWLVDL+N F +GGF + + ++ + + + +L++P G EYL
Sbjct: 270 SPISTFQKEPHGWLVDLVNRFAELGGFSAIQSKLHSED-IELGAVSSLVQPLGVCAEYLN 328
Query: 237 LPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDT 296
+ P++ + + ++N+ +++LK + +L++
Sbjct: 329 SSVVQPMLDPVIHNMIKYVQNVEEKDLKDK-----------------RLVS--------- 362
Query: 297 EIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKII 356
+PE+L + KLL R Q D V ++ RL I+
Sbjct: 363 --IPELL-------------------------SAIKLLCMRF--QPDLVTVVDDLRLDIL 393
Query: 357 LRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRD 416
LR+L+ F+ KMN+L EV K+I + + PDR+ W+ +N+VL I L
Sbjct: 394 LRMLKSPHFSAKMNSLKEVTKLIEDSTV---SKSVKNAIDPDRLLNWLVENSVLSIALEG 450
Query: 417 SLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSP 476
++ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A FS
Sbjct: 451 NIDQAQYCDRIKGIIELLGSK--LSLDELTKIWRIQSGQPSTVIENIHSIIAAAAVKFSS 508
Query: 477 VQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMT 536
QL HLFV Q SW S + + +KLL LI R+ + + KVL + W LAH + +
Sbjct: 509 EQLSHLFVLIQKSWESESDRVRQKLLSLIGRIGREARVDSTTGKVLEVLWDLAHLPTLPS 568
Query: 537 DIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKS-----NPK--WVVPALRQIKD 589
+++QAL HL IL + + ++ K ++ CIE+ K NP+ WVVPALRQ+ +
Sbjct: 569 SLIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRSSQHHNPQFVWVVPALRQLHE 627
Query: 590 ICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQISS 645
I +RS Q SII L KN ++ L+T +L + ++++
Sbjct: 628 I-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLIACHRLAA 670
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + L ++ +LIG +++W++ + + E+IA
Sbjct: 769 EITMNGFGLFKTFFENVNLCDHRL--KRQGTQLHVEKLELIGMDFIWKIAMESPDEEIAN 826
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
AI L+ S +L P+L+ HK FIA+C RL A +G T + A ++
Sbjct: 827 EAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKM 885
Query: 799 WTALAQEAI 807
TA A +
Sbjct: 886 LTATAMPTV 894
>gi|390341500|ref|XP_796637.3| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 24-like [Strongylocentrotus purpuratus]
Length = 2693
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 234/864 (27%), Positives = 368/864 (42%), Gaps = 162/864 (18%)
Query: 1 PPPPQPGTSSD--KDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLP 58
PPPP + + +D SSS + + +FP L L+ ++ + +W +P
Sbjct: 79 PPPPSYDEAVEPVEDEDPSSSSVEAREEESVEVSKEFPQGNLYELEGRVFTDQWSIPYKK 138
Query: 59 EQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYN 118
E+ L + AA L + E C RF + +F K++T AVH W IH IYN
Sbjct: 139 EESLGKCLVAATRLASEGLLENDENCVRFVNRCMPEAFRKLMTSKAVHRWGAEIHEGIYN 198
Query: 119 NCQKLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIF 176
Q +EL+ ++L P LL++L M NP +FH N ++ + + F
Sbjct: 199 MLQLFIELVAVRLKYKPVPIELLEVLGMALNPETEFHYKNRAKKWDHIFWEEKFGVNSTF 258
Query: 177 A--RPIDYYKNQRGWLVDLINLFGSMGGFQILLER-FQNKSTLTIPVIFALIRPFGQVHE 233
A P + YK+ GWLV+LIN F GG + +R ++ + P + L++P G E
Sbjct: 259 AVSPPFETYKDPCGWLVNLINAFAYHGGMDQIRDRVLESLDDVDPPTLSTLMQPLGYCGE 318
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
YL P FM +E
Sbjct: 319 YLN-PLKFAPFMSQVE-------------------------------------------- 333
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+ V + +++L + ELK++ K +IS ++ + K L D VK+++ RL
Sbjct: 334 ---KQVLKYVQDLKEHELKRK-----KTGSISELLTTMKCLCLHF--WVDDVKKVDDLRL 383
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYP-HRHPEEEWLTPDRMAKWIKDNNVLEI 412
+ LR+L FN KMN+L E+ K+I + +R+ EE + D W+ +N VL +
Sbjct: 384 SVALRMLNSPHFNAKMNSLKEITKMIEDTSISSRNRNAIEEEVILD----WLVENKVLSV 439
Query: 413 VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAW 472
L ++ Q QY +KL+ I+ FL + LS+ DL +W Q + +V N+H ++A A
Sbjct: 440 ALEGNIDQSQYADKLKGIVEFLGPK--LSIEDLTKIWKMQNDQPLTVVDNIHSIMAAAAV 497
Query: 473 DFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSD 532
FS QL+HLF Q +W + N + EKLL LI R+ D + KVL L W LAH
Sbjct: 498 KFSGEQLEHLFHLIQKAWQNENERVQEKLLSLIGRIGRDARSPKTTCKVLELLWDLAHLP 557
Query: 533 DVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK------------SNPKWV 580
+ + ME AL HL IL S + + K ++ C+E+ K + +V
Sbjct: 558 AIPKNHMEHALEEHLFILSDSLAVGM-QIKNKYVAKCVEDIKRVRTLILLXFNENKFVFV 616
Query: 581 VPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNL--C 638
VPALRQI I ++ +S+S ++ S+ L K + +I L T +L C
Sbjct: 617 VPALRQIHQIA------------KGITKQSYSKTDK-SLPQELNKTYDIIKLTTQSLMKC 663
Query: 639 SLLQISS-----------FNGKMNALNEVN---KVIA-----GVAYYPHRHPEEEWLT-- 677
+ I++ +GK V K +A G Y E W T
Sbjct: 664 HKMAINAAGQDGLSGSTIVDGKYTHCEHVEIHLKFLAFILQEGALYLQWHRAREIWDTLV 723
Query: 678 -------PDRQ---------------------------------LTESGLKCFEKFFKSV 697
DR+ L+ G C FF+S+
Sbjct: 724 ANPEACEADRETCYEWFRHGLADLETETQMQLFKDKLLRLESTHLSPMGFDCVRAFFESI 783
Query: 698 NIGEGKLVLKVKKRSLLLDNADLIGAEYLWR-VITNAGEDIAFRAIDLLKEVS-THLGPK 755
N L+ L+++ DL G +++W+ V+ + E IA AI + +S T+L +
Sbjct: 784 NTNNHS--LRKGATGLIVEKLDLFGLDFMWKMVLESTNESIAEMAIRQIMSMSYTNLAQR 841
Query: 756 LQSSLTQFHKTFIAECLDRLRAHY 779
L+ + HK FI+EC RL Y
Sbjct: 842 LKKDVLDLHKHFISECYKRLELAY 865
>gi|395530563|ref|XP_003767360.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Sarcophilus
harrisii]
Length = 2763
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 194/676 (28%), Positives = 323/676 (47%), Gaps = 118/676 (17%)
Query: 5 QPGTSSDKDISQSSSHRK--EGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQEL 62
+P S + S S RK E +C G +FP L L+S++ + W +P E+ L
Sbjct: 236 RPVGSQRAALQASVSVRKNDENGNCS-GDNIEFPTTNLYELESRVLTDHWSIPYKREESL 294
Query: 63 -ECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
+CLI +A L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 295 GKCLIASA-RLARLGLSESDENCKRFVDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 353
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNI-ADDEIFA- 177
L++L ++ QD P LL +LTM FNP N++H N+ +S + I + +FA
Sbjct: 354 LLVDLAAERVKQDPIPIGLLGVLTMAFNPDNEYHF--KNRMKVSQRNWAEIFGEGNMFAI 411
Query: 178 RPIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLT 236
P+ ++ + GWLVDL+N FG +GGF + + ++ + + + AL++P G EYL
Sbjct: 412 SPVSAFQKEPHGWLVDLVNRFGELGGFAAIQSKLHSED-VELGAVSALVQPLGVCAEYLN 470
Query: 237 LPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDT 296
+ P++ + + ++++ +++LK + +L++
Sbjct: 471 SSVVQPMLDPVIHKMIKYVQSVEEKDLKDK-----------------RLVS--------- 504
Query: 297 EIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKII 356
+PE+L + KLL R Q D V ++ RL I+
Sbjct: 505 --IPELLSAI-------------------------KLLCMRF--QPDLVMVVDDLRLDIL 535
Query: 357 LRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRD 416
LR+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L
Sbjct: 536 LRMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEG 592
Query: 417 SLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSP 476
++ Q QY ++++ I+ L + LSL +L +W QAG+ +++N+H ++A A FS
Sbjct: 593 NIDQAQYCDRIKGIIELLGSK--LSLDELTKIWRIQAGQSSTVIENIHTIIAAAAVKFSS 650
Query: 477 VQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMT 536
QL+HLFV Q SW + N + +KLL LI R+ + + + KVL + W LAH + +
Sbjct: 651 DQLNHLFVLIQKSWETENDRVRQKLLSLIGRIGREARFETTSGKVLEVLWDLAHLPTLPS 710
Query: 537 DIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------S 575
+++QAL HL IL + + ++ K ++ CIE+ K +
Sbjct: 711 SLIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQHN 769
Query: 576 NPK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSL 629
NP+ WVVPALRQ+ +I +RS Q SII L KN +
Sbjct: 770 NPQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEI 812
Query: 630 IMLITNNLCSLLQISS 645
+ L+T +L + ++++
Sbjct: 813 VKLVTGSLIACHRLAA 828
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + L ++ +L+G +++W++ + + E+IA
Sbjct: 927 EITMNGFALFKTFFENVNLCDHRL--KRQGAQLYVEKLELVGMDFIWKIAMESPDEEIAN 984
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
AI L+ S +L P+L+ H+ FIA+C RL A +G T + A ++
Sbjct: 985 EAIQLIINYSYINLNPRLKKDSVSLHRKFIADCYARLEAASSALG-GPTLTHAVTRATKM 1043
Query: 799 WTALAQEAI 807
TA A +
Sbjct: 1044 LTATAMPTV 1052
>gi|334321681|ref|XP_003340143.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Monodelphis
domestica]
Length = 2641
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 188/656 (28%), Positives = 315/656 (48%), Gaps = 116/656 (17%)
Query: 23 EGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQEL-ECLIKAAIELCKTNSDVDS 81
E +C G +FP L L+S++ + W +P E+ L +CLI +A L +
Sbjct: 134 ENGNCS-GDNIEFPTTNLYELESRVLTDHWSIPYKREESLGKCLIASA-RLARLGLSESD 191
Query: 82 EPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LL 139
E C+RF + +F K+LT AVH W IH IYN L++L ++ QD P LL
Sbjct: 192 ENCKRFVDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLVDLAAERVKQDPIPIGLL 251
Query: 140 DILTMVFNPCNKFHTFNSNQQSISVPVNSNI-ADDEIFA-RPIDYYKNQ-RGWLVDLINL 196
+LTM FNP N++H N+ +S + I + +FA P+ ++ + GWLVDL+N
Sbjct: 252 GVLTMAFNPDNEYHF--KNRMKVSQRNWAEIFGEGNMFAISPVSAFQKEPHGWLVDLVNR 309
Query: 197 FGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILE 256
FG +GGF + + ++ + + + AL++P G EYL + P++ + + ++
Sbjct: 310 FGELGGFAAIQSKLHSED-IELGAVSALVQPLGVCAEYLNSSVVQPMLDPVIHKMIKYVQ 368
Query: 257 NLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAK 316
++ +++LK + +L++ +PE+L
Sbjct: 369 SVEEKDLKDK-----------------RLVS-----------IPELL------------- 387
Query: 317 NESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVN 376
+ KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV
Sbjct: 388 ------------SAIKLLCMRF--QPDLVMVVDDLRLDILLRMLKSPHFSAKMNSLKEVT 433
Query: 377 KVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIK 436
K+I + + DR+ W+ +N+VL I L ++ Q QY ++++ I+ L
Sbjct: 434 KLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGS 490
Query: 437 EKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRK 496
+ LSL +L +W QAG+ +++N+H ++A A FS QL+HLFV Q SW + N +
Sbjct: 491 K--LSLDELTKIWRIQAGQSSTVIENIHTIIAAAAVKFSSDQLNHLFVLIQKSWETENDR 548
Query: 497 QTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQ 556
+KLL LI R+ + + + KVL + W LAH + + +++QAL HL IL + +
Sbjct: 549 VRQKLLSLIGRIGREARFETTSGKVLEVLWDLAHLPTLPSSLIQQALEEHLTILSDAYAV 608
Query: 557 ERDKQKTIWLQTCIEEFK---------------------SNPK--WVVPALRQIKDICCL 593
++ K ++ CIE+ K +NP+ WVVPALRQ+ +I
Sbjct: 609 -KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQHNNPQFVWVVPALRQLHEI--- 664
Query: 594 YEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQISS 645
+RS Q SII L KN ++ L+T +L + ++++
Sbjct: 665 --------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLIACHRLAA 706
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + L ++ +LIG +++W++ + + E+IA
Sbjct: 805 EITMNGFGLFKTFFENVNLCDHRL--KRQGTQLYVEKLELIGMDFIWKIAMESPDEEIAN 862
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
AI L+ S +L P+L+ H+ FIA+C RL A +G T + A ++
Sbjct: 863 EAIQLIISYSYINLNPRLKKDSVSLHRKFIADCYARLEAASSALG-GPTLTHAVTRATKM 921
Query: 799 WTALAQEAI 807
TA A +
Sbjct: 922 LTATAMPTV 930
>gi|426218747|ref|XP_004003598.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Ovis aries]
Length = 2793
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 186/654 (28%), Positives = 310/654 (47%), Gaps = 112/654 (17%)
Query: 23 EGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSE 82
E +C G +FP L L+S++ + W +P E+ L + A+ L + E
Sbjct: 285 ENGNCS-GERIEFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLARLGFSESDE 343
Query: 83 PCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLD 140
C+RF + +F K+LT AVH W IH IYN L+EL+ ++ QD P LL
Sbjct: 344 NCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERMKQDPIPTGLLA 403
Query: 141 ILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWLVDLINLFG 198
+LTM FNP N++H F + + + +FA P+ ++ + GWLVDL+N FG
Sbjct: 404 VLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAISPVSTFQKEPHGWLVDLVNKFG 462
Query: 199 SMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENL 258
+GGF ++ + ++ + + + AL++P G EYL + P+L+ P IL +
Sbjct: 463 ELGGFAVIQAKLHSED-IELGAVSALVQPLGVCAEYLNSSVV----QPMLD--PVILNTI 515
Query: 259 TDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNE 318
D +E +K +L++ +PE+L +
Sbjct: 516 QDVRSVEEKD-----------LKDKRLVS-----------IPELLSAI------------ 541
Query: 319 SKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKV 378
KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV K+
Sbjct: 542 -------------KLLCMRF--QPDLVTVVDDLRLDILLRMLKSPHFSAKMNSLKEVTKL 586
Query: 379 IAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEK 438
I + + DR+ W+ +N+VL I L ++ Q QY ++++ I+ L +
Sbjct: 587 IEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSK- 642
Query: 439 ALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQT 498
LSL +L +W Q+G+ +++N+H ++A A F+ QL+HLFV Q SW + + +
Sbjct: 643 -LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQKSWETESDRVR 701
Query: 499 EKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQER 558
+KLL LI R+ + + + KVL++ W LAH + + +++QAL HL IL + + +
Sbjct: 702 QKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSSLIQQALEEHLTILSDAYAV-K 760
Query: 559 DKQKTIWLQTCIEEFK---------------------SNPK--WVVPALRQIKDICCLYE 595
+ K ++ CIE+ K +NP+ WVVPALRQ+ +I
Sbjct: 761 EAIKRSYIIKCIEDIKRPGEWSGLDKNKKDGFKSSQINNPQFVWVVPALRQLHEI----- 815
Query: 596 PGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQISS 645
+RS Q SII L KN ++ L+T +L + ++++
Sbjct: 816 ------------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLIACHRLAA 857
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + L ++ +LIG +++W++ + + E+IA
Sbjct: 956 EITMNGFTLFKTFFENVNLCDHRL--KRQGAQLYVEKLELIGMDFIWKIAMESPDEEIAN 1013
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
AI L+ S +L P+L+ HK FIA+C RL A +G T + A ++
Sbjct: 1014 EAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKM 1072
Query: 799 WTALAQEAI 807
TA A +
Sbjct: 1073 LTATAMPTV 1081
>gi|296208061|ref|XP_002807053.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 24 [Callithrix jacchus]
Length = 2594
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 232/900 (25%), Positives = 380/900 (42%), Gaps = 208/900 (23%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 97 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 149
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 150 LGKCLLASTYLARLGLSESDENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 209
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNP--CNKFHTFNSNQQSISVPVNSNIADDEIFA 177
L+EL+ ++ QD P LL +LTM N C+ TF
Sbjct: 210 LLIELVAERIKQDPIPIGLLGVLTMRENMFCCSPVSTFQ--------------------- 248
Query: 178 RPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
K GW+VDL+N FG +GGF + + ++ + + + ALI+P G EYL
Sbjct: 249 ------KEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNS 301
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L P IL + D KE +K +L++
Sbjct: 302 SVV----QPMLN--PVILTTIQDVRSVKEKD-----------LKXKRLVS---------- 334
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 335 -IPELLSAI-------------------------KLLCMRF--QPDLVTIVDDLRLDILL 366
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 367 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 423
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 424 IDQAQYCDRIKGIIELLGSK--LSLEELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSD 481
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 482 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSS 541
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SN 576
+++QAL HL IL + + ++ K ++ CIE+ K +N
Sbjct: 542 LIQQALEEHLTILSDAYAV-KEAVKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNN 600
Query: 577 PK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLI 630
P+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 601 PQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIV 643
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH------------------ 670
L+T +L + ++++ L+ V Y Y H
Sbjct: 644 KLVTGSLIACHRLAAAVAGPGGLSGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWN 703
Query: 671 -PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNA 718
E W L + + E + CFE F K + E + +LK++ + ++
Sbjct: 704 RAREIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGF 763
Query: 719 DL-----------------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEV 748
+L IG +++W++ + + E+IA AI L+
Sbjct: 764 NLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINY 823
Query: 749 S-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 824 SYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 882
>gi|432095625|gb|ELK26763.1| Ubiquitin carboxyl-terminal hydrolase 24 [Myotis davidii]
Length = 2539
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 227/877 (25%), Positives = 377/877 (42%), Gaps = 200/877 (22%)
Query: 24 GTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEP 83
G G G +FP L L+S++ + W +P E+ L + A+ L + E
Sbjct: 56 GNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLARLGLSESDEN 113
Query: 84 CQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLDI 141
C+RF + +F K+LT AVH W IH IYN L+EL+ ++ QD P LL +
Sbjct: 114 CKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPIGLLGV 173
Query: 142 LTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWLVDLINLFGS 199
LTM FNP N++H F + + + +FA P+ ++ + GW+VDL+N FG
Sbjct: 174 LTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAISPVSTFQKEPHGWVVDLVNKFGE 232
Query: 200 MGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLT 259
+GGF + + +++ + + + AL++P G EYL + P+L+ P IL +
Sbjct: 233 LGGFAAIQAKLRSED-IELGAVSALVQPLGVCAEYLNSSVV----QPMLD--PVILTTIQ 285
Query: 260 DEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNES 319
D +E +K +L++ +PE+L +
Sbjct: 286 DVRSVEEKD-----------LKDKRLVS-----------IPELLSAI------------- 310
Query: 320 KNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVI 379
KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV K+I
Sbjct: 311 ------------KLLCMRF--QPDLVTVVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLI 356
Query: 380 AGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKA 439
+ + DR+ W+ +N+VL I L ++ Q QY ++++ I+ L +
Sbjct: 357 EDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSK-- 411
Query: 440 LSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTE 499
LSL +L +W Q+G+ +++N+H ++A A F+ QL+HLFV Q SW +TE
Sbjct: 412 LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQKSW------ETE 465
Query: 500 KLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERD 559
+D+VL++ W LAH + + +++QAL HL IL + + ++
Sbjct: 466 ------------------SDRVLDVLWELAHLPTLPSSLIQQALDEHLTILSDAYAV-KE 506
Query: 560 KQKTIWLQTCIEEFK--------------------SNPK--WVVPALRQIKDICCLYEPG 597
K ++ CIE+ K +NP+ WVVPALRQ+ +I
Sbjct: 507 AIKRSYIIKCIEDIKRPGEWSGLEKKKDGFKSCQLNNPQFVWVVPALRQLHEI------- 559
Query: 598 QNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNAL 653
+RS Q SII L KN ++ L+T +L + ++++ L
Sbjct: 560 ----------TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLIACHRLAAAMAGPGGL 609
Query: 654 NEVNKVIAGVAY--YPHRH-------------------PEEEW--LTPDRQLTESGLK-C 689
V Y Y H +E W L + + E + C
Sbjct: 610 TGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRAKEIWECLVTGQDVCELDREMC 669
Query: 690 FEKFFKSVNIGEGKL--------VLKVKKRSLLLDNADL--------------------- 720
FE F K + E + +LK++ + ++ +L
Sbjct: 670 FEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFNLFKTFFENVNLCDHRLKRQGAQ 729
Query: 721 --------IGAEYLWRV-ITNAGEDIAFRAIDLLKEVS-THLGPKLQSSLTQFHKTFIAE 770
IG +++W++ + + E+IA AI L+ S +L P+L+ HK FIA+
Sbjct: 730 LYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSYINLNPRLKKDSVSLHKKFIAD 789
Query: 771 CLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
C RL A +G T + A ++ TA A +
Sbjct: 790 CYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 825
>gi|119627063|gb|EAX06658.1| hCG33036, isoform CRA_b [Homo sapiens]
Length = 2684
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 163/555 (29%), Positives = 270/555 (48%), Gaps = 69/555 (12%)
Query: 24 GTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEP 83
G G G +FP L L+S++ + W +P E+ L + A+ L + E
Sbjct: 60 GNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLARLGLSESDEN 117
Query: 84 CQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLDI 141
C+RF + +F K+LT AVH W IH IYN L+EL+ ++ QD P LL +
Sbjct: 118 CRRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPIGLLGV 177
Query: 142 LTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWLVDLINLFGS 199
LTM FNP N++H F + + + +FA P+ ++ + GW+VDL+N FG
Sbjct: 178 LTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVSPVSTFQKEPHGWVVDLVNKFGE 236
Query: 200 MGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLT 259
+GGF + + ++ + + + ALI+P G EYL + P+L+ P IL +
Sbjct: 237 LGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNSSVV----QPMLD--PVILTTIQ 289
Query: 260 DEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNES 319
D +E +K +L++ +PE+L
Sbjct: 290 DVRSVEEKD-----------LKDKRLVS-----------IPELL---------------- 311
Query: 320 KNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVI 379
+ KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV K+I
Sbjct: 312 ---------SAVKLLCMRF--QPDLVTIVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLI 360
Query: 380 AGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKA 439
+ + DR+ W+ +N+VL I L ++ Q QY ++++ I+ L
Sbjct: 361 EDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELL--GSK 415
Query: 440 LSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTE 499
LSL +L +W Q+G+ +++N+H ++A A F+ QL+HLFV Q SW + + + +
Sbjct: 416 LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQKSWETESDRVRQ 475
Query: 500 KLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERD 559
KLL LI R+ + + + KVL++ W LAH + + +++QAL HL IL + + ++
Sbjct: 476 KLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSSLIQQALEEHLTILSDAYAV-KE 534
Query: 560 KQKTIWLQTCIEEFK 574
K ++ CIE+ K
Sbjct: 535 AIKRSYIIKCIEDIK 549
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + L ++ +LIG +++W++ + + E+IA
Sbjct: 847 EITMNGFNLFKTFFENVNLCDHRL--KRQGAQLYVEKLELIGMDFIWKIAMESPDEEIAN 904
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
AI L+ S +L P+L+ HK FIA+C RL A +G T + A ++
Sbjct: 905 EAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKM 963
Query: 799 WTALAQEAI 807
TA A +
Sbjct: 964 LTATAMPTV 972
>gi|119627064|gb|EAX06659.1| hCG33036, isoform CRA_c [Homo sapiens]
Length = 2677
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 163/555 (29%), Positives = 271/555 (48%), Gaps = 69/555 (12%)
Query: 24 GTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEP 83
G G G +FP L L+S++ + W +P E+ L + A+ L + E
Sbjct: 60 GNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLARLGLSESDEN 117
Query: 84 CQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLDI 141
C+RF + +F K+LT AVH W IH IYN L+EL+ ++ QD P LL +
Sbjct: 118 CRRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPIGLLGV 177
Query: 142 LTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWLVDLINLFGS 199
LTM FNP N++H F + + + +FA P+ ++ + GW+VDL+N FG
Sbjct: 178 LTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVSPVSTFQKEPHGWVVDLVNKFGE 236
Query: 200 MGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLT 259
+GGF + + ++ + + + ALI+P G EYL + P+L+ P IL +
Sbjct: 237 LGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNSSVV----QPMLD--PVILTTIQ 289
Query: 260 DEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNES 319
D +E +K +L++ +PE+L
Sbjct: 290 DVRSVEEKD-----------LKDKRLVS-----------IPELL---------------- 311
Query: 320 KNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVI 379
+ KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV K+I
Sbjct: 312 ---------SAVKLLCMRF--QPDLVTIVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLI 360
Query: 380 AGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKA 439
+ + DR+ W+ +N+VL I L ++ Q QY ++++ I+ L +
Sbjct: 361 EDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSK-- 415
Query: 440 LSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTE 499
LSL +L +W Q+G+ +++N+H ++A A F+ QL+HLFV Q SW + + + +
Sbjct: 416 LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQKSWETESDRVRQ 475
Query: 500 KLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERD 559
KLL LI R+ + + + KVL++ W LAH + + +++QAL HL IL + + ++
Sbjct: 476 KLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSSLIQQALEEHLTILSDAYAV-KE 534
Query: 560 KQKTIWLQTCIEEFK 574
K ++ CIE+ K
Sbjct: 535 AIKRSYIIKCIEDIK 549
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + L ++ +LIG +++W++ + + E+IA
Sbjct: 847 EITMNGFNLFKTFFENVNLCDHRL--KRQGAQLYVEKLELIGMDFIWKIAMESPDEEIAN 904
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
AI L+ S +L P+L+ HK FIA+C RL A +G T + A ++
Sbjct: 905 EAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKM 963
Query: 799 WTALAQEAI 807
TA A +
Sbjct: 964 LTATAMPTV 972
>gi|119627062|gb|EAX06657.1| hCG33036, isoform CRA_a [Homo sapiens]
Length = 1284
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 163/555 (29%), Positives = 270/555 (48%), Gaps = 69/555 (12%)
Query: 24 GTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEP 83
G G G +FP L L+S++ + W +P E+ L + A+ L + E
Sbjct: 60 GNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLARLGLSESDEN 117
Query: 84 CQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLDI 141
C+RF + +F K+LT AVH W IH IYN L+EL+ ++ QD P LL +
Sbjct: 118 CRRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPIGLLGV 177
Query: 142 LTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWLVDLINLFGS 199
LTM FNP N++H F + + + +FA P+ ++ + GW+VDL+N FG
Sbjct: 178 LTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVSPVSTFQKEPHGWVVDLVNKFGE 236
Query: 200 MGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLT 259
+GGF + + ++ + + + ALI+P G EYL + P+L+ P IL +
Sbjct: 237 LGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNSSVV----QPMLD--PVILTTIQ 289
Query: 260 DEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNES 319
D +E +K +L++ +PE+L
Sbjct: 290 DVRSVEEKD-----------LKDKRLVS-----------IPELLS--------------- 312
Query: 320 KNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVI 379
+ KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV K+I
Sbjct: 313 ----------AVKLLCMRF--QPDLVTIVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLI 360
Query: 380 AGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKA 439
+ + DR+ W+ +N+VL I L ++ Q QY ++++ I+ L
Sbjct: 361 EDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELL--GSK 415
Query: 440 LSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTE 499
LSL +L +W Q+G+ +++N+H ++A A F+ QL+HLFV Q SW + + + +
Sbjct: 416 LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQKSWETESDRVRQ 475
Query: 500 KLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERD 559
KLL LI R+ + + + KVL++ W LAH + + +++QAL HL IL + + ++
Sbjct: 476 KLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSSLIQQALEEHLTILSDAYAV-KE 534
Query: 560 KQKTIWLQTCIEEFK 574
K ++ CIE+ K
Sbjct: 535 AIKRSYIIKCIEDIK 549
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + L ++ +LIG +++W++ + + E+IA
Sbjct: 847 EITMNGFNLFKTFFENVNLCDHRL--KRQGAQLYVEKLELIGMDFIWKIAMESPDEEIAN 904
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
AI L+ S +L P+L+ HK FIA+C RL A +G T + A ++
Sbjct: 905 EAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKM 963
Query: 799 WTALAQEAI 807
TA A +
Sbjct: 964 LTATAMPTV 972
>gi|350586171|ref|XP_003356500.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Sus scrofa]
Length = 2417
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 212/810 (26%), Positives = 354/810 (43%), Gaps = 175/810 (21%)
Query: 92 LSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLDILTMVFNPC 149
S+ ++LT AVH W IH IYN L+EL+ ++ QD P LL +LTM FNP
Sbjct: 4 FSVKSQRLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPTGLLAVLTMAFNPD 63
Query: 150 NKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWLVDLINLFGSMGGFQILL 207
N++H F + + + +FA P+ ++ + GW+VDL+N FG +GGF +
Sbjct: 64 NEYH-FKNRMKVSQRNWAEVFGEGNMFAVSPVSTFQKEPHGWVVDLVNKFGELGGFAAIQ 122
Query: 208 ERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEA 267
+ ++ + + + AL++P G EYL + P+L+ P IL + D +E
Sbjct: 123 AKLHSED-IELGAVSALVQPLGVCAEYLNSSVV----QPMLD--PVILTTIQDVRSVEEK 175
Query: 268 KNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVI 327
+K +L++ +PE+L
Sbjct: 176 D-----------LKDKRLVS-----------IPELL------------------------ 189
Query: 328 IKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPH 387
+ KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV K+I
Sbjct: 190 -SAIKLLCMRF--QPDLVTVVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLIEDSTL--- 243
Query: 388 RHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDA 447
+ + DR+ W+ +N+VL I L ++ Q QY ++++ I+ L LSL +L
Sbjct: 244 SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELL--GSKLSLDELTK 301
Query: 448 VWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRR 507
+W Q+G+ +++N+H ++A A F+ QL+HLFV Q SW + + + +KLL LI R
Sbjct: 302 IWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQKSWETESDRVRQKLLSLIGR 361
Query: 508 LAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQ 567
+ + + + KVL++ W LAH + + +++QAL HL IL + + ++ K ++
Sbjct: 362 IGREARYETTSGKVLDVLWELAHLPTLPSSLIQQALEEHLTILSDAYAV-KEAIKRSYII 420
Query: 568 TCIEEFK---------------------SNPK--WVVPALRQIKDICCLYEPGQNLNSHA 604
CIE+ K +NP+ WVVPALRQ+ +I
Sbjct: 421 KCIEDIKRPGEWSGLEKNKKDGFKSSQLNNPQFVWVVPALRQLHEI-------------- 466
Query: 605 PLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVI 660
+RS Q SII L KN ++ L+T +L + ++++ L V
Sbjct: 467 ---TRSFIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLIACHRLAAAVAGPGGLTGSTLVD 523
Query: 661 AGVAY--YPHRH-------------------PEEEW--LTPDRQLTESGLK-CFEKFFKS 696
Y Y H +E W L + + E + CFE F K
Sbjct: 524 GRYTYREYLEAHLKFLAFFLQEATLYLGWNRAKEIWECLVTGQDVCELDREMCFEWFTKG 583
Query: 697 VNIGEGKL--------VLKVKKRSLLLDNADL---------------------------- 720
+ E + +LK++ + ++ +L
Sbjct: 584 QHDLESDVQQQLFKEKILKLESYEITMNGFNLFKTFFENVNLCDHRLKRQGAQLYVEKLE 643
Query: 721 -IGAEYLWRV-ITNAGEDIAFRAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRA 777
IG +++W++ + + E+IA AI L+ S +L P+L+ HK FIA+C RL A
Sbjct: 644 LIGMDFIWKIAMESPDEEIANEAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEA 703
Query: 778 HYDTIGLSHTYRPILPEARQIWTALAQEAI 807
+G T + A ++ TA A +
Sbjct: 704 ASSALG-GPTLTHAVTRATKMLTATAMPTV 732
>gi|301603969|ref|XP_002931653.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 24-like [Xenopus (Silurana) tropicalis]
Length = 2551
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 182/656 (27%), Positives = 305/656 (46%), Gaps = 122/656 (18%)
Query: 23 EGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQEL-ECLIKAAIELCKTNSDVDS 81
E +C G +FP L L+S++ + W +P E+ L +CLI A+ L K
Sbjct: 90 ENGNCS-GENIEFPTTNLYELESRVLTDHWSIPYKREESLGKCLI-ASTYLAKLGISDSD 147
Query: 82 EPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LL 139
E C+RF + +F K+LT AVH W IH IYN L++L+ ++ Q+ P LL
Sbjct: 148 ENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLVDLVAERIKQETIPTGLL 207
Query: 140 DILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFAR-----PIDYYKNQR--GWLVD 192
+LTMV + N+ + ++P+ N ++ + I ++ Q GWLVD
Sbjct: 208 GVLTMVMTSKHXISYKNNFTIAKNIPL-LNFCPLTVYXQIGNSAKISFFFPQEPHGWLVD 266
Query: 193 LINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVP 252
L+N FG +GGF + + N + + + AL++P G EYL T+ ++ +
Sbjct: 267 LVNRFGELGGFSAIQSKL-NSEDIELGAVSALVQPLGVCAEYLNSSTVQPMLDRVIHKMI 325
Query: 253 EILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELK 312
+ ++++ +++LK + +L++ +PE+L +
Sbjct: 326 KYVQSVEEKDLKDK-----------------RLVS-----------IPELLSAI------ 351
Query: 313 KEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNAL 372
KLL R Q D V ++ RL I+LR+L+ F+ KMN+L
Sbjct: 352 -------------------KLLCMRF--QPDLVTAVDDLRLDILLRMLKSPHFSAKMNSL 390
Query: 373 NEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILR 432
EV K+I + + DR+ W+ +N+VL I L ++ Q QY ++++ I+
Sbjct: 391 KEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIE 447
Query: 433 FLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTS 492
L + LSL +L +W Q+G+ +++N+H ++A A F+ QL HLFV Q W +
Sbjct: 448 LLGSK--LSLDELSKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLSHLFVLIQKCWEN 505
Query: 493 ANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKIL-D 551
+ + +KLL LI R+ + ++ KVL + W LAH + + +++QAL HL IL D
Sbjct: 506 ESDRVRQKLLSLIGRIGREARNETTTAKVLEVLWELAHLPALPSSLIQQALDEHLTILCD 565
Query: 552 YSCSQERDKQKTIWLQTCIEEFK----------------------SNPK--WVVPALRQI 587
+E K+ ++ CIE+ K +NP+ WVVPALRQ+
Sbjct: 566 AYAVKETIKRS--YIIKCIEDIKKVTIFFLLRINVPFQYFQSSQHNNPQVVWVVPALRQL 623
Query: 588 KDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNLCS 639
+I +RS + Q SII L KN ++ L+T +L +
Sbjct: 624 HEI-----------------TRSFNKQTYQKQDKSIIQDLKKNFEIVKLVTASLVA 662
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + LL++ +LIG +++W++ + + E+IA
Sbjct: 767 EITMNGFNLFKTFFENVNLCDHRL--KRQGTQLLVEKLELIGMDFIWKIAVESPDEEIAN 824
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
AI L+ S +L P+L+ HK FIA+C RL A +G T + A ++
Sbjct: 825 EAIQLIINYSYINLNPRLKKDSVPLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKM 883
Query: 799 WTALAQEAI 807
TA A ++
Sbjct: 884 LTATAMPSV 892
>gi|427798491|gb|JAA64697.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 1223
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 221/853 (25%), Positives = 378/853 (44%), Gaps = 174/853 (20%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQEL-ECLIKAAIEL-----CKTNSDVDSEPCQRFF 88
FP L L+ ++ +W +P ++ L +CLI AA L C++NSD C+ F
Sbjct: 38 FPQANLYELEQRVFVDQWSIPYKKDESLAKCLI-AATNLAKEGQCESNSD-----CRNFM 91
Query: 89 REGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP---LLDILTMV 145
+ F K+LT AV +W+ ++ +YN L++L V +LG + P L ++LTM
Sbjct: 92 ESCMPECFRKLLTALAVRNWQPDVQEGVYNMLMLLIDLTVERLGYNPVPEKLLSNVLTMA 151
Query: 146 FNPCNKFHTFNSNQQSISVPVNSNIADDEIFARP---IDYYKNQRGWLVDLINLFGSMGG 202
F+P +FH N ++QS + + ++A+ +D Y GWL+D+IN FGS GG
Sbjct: 152 FDPEAEFHIKNKSRQST---LEQGLV---VYAKSRGSLDPY----GWLLDVINKFGSRGG 201
Query: 203 FQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEE 262
F +L +F LT + AL+ P ++L T P +
Sbjct: 202 FDKILAKF--GENLTANEMAALLNPLAVCAQFLNPDTTCSLLSPCM-------------- 245
Query: 263 LKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKN- 321
N AIS I + LTD++LK +KN
Sbjct: 246 ----------NKAISYI------------------------KGLTDDDLK------NKNI 265
Query: 322 DAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAG 381
+++ ++K+ K+L + QE + L +ILR+L+ S FN +MN L E+ K+I
Sbjct: 266 GSVTELLKAVKMLCVYLWPQE--IASTSTLCLDVILRMLKCSHFNARMNGLKELIKLIDD 323
Query: 382 VAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALS 441
+ + + +++ W+ +NNVL I L ++ Q QY++K++ I+ F+ + LS
Sbjct: 324 CSATGAS--SKAAIDAEQLQNWMAENNVLSITLESNIDQAQYMDKIKSIIEFV--GQRLS 379
Query: 442 LGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKL 501
+ +L +W+ Q ++ +V N+H ++A + FS Q DHL +W ++ +L
Sbjct: 380 IEELTKIWSMQDRQNCQVVDNIHGIMAAASTKFSQQQFDHLITLISKAWRGSSDITWRRL 439
Query: 502 LELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQ 561
L I +L ++ G ++ K+L+L W L H + + +EQ + IL S RD
Sbjct: 440 LTFIGKLGKESNQGKVSTKLLDLLWELLHLNSLPQAHVEQFVEEFFSIL--SEMGNRDSA 497
Query: 562 KTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQS--I 619
K ++ C+++ K N V+PAL+ ++ I S A S+ S +Q I
Sbjct: 498 KRQYVARCVDDIKKN-MCVIPALKMLRHI-----------SGAKGSAGSKGPPYKQDKFI 545
Query: 620 IDILIKNHSLIMLITNNL--CSLLQISSFNGK------------------MNALNEVNKV 659
+ L ++H ++ L++ +L C + NGK M L + +
Sbjct: 546 FNELNRSHEVVKLVSTSLATCHRDAVKLANGKSVLPLVLVDGIYSHKEHVMTHLEFLQFL 605
Query: 660 IA-GVAYYPHRHPEEEWLT----PD----------------------------------- 679
+ G Y P +E W T PD
Sbjct: 606 LKDGSQYLPWNRAKEIWDTLVTNPDACSSDREMCFEWFEKCLPDLEADTQSLLFQHKLLK 665
Query: 680 ---RQLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGE 735
Q+ CF+ +F+ VNI E K LK + L+++ +L G ++LW++ + E
Sbjct: 666 MDPSQVGSKAFSCFKTYFEHVNIHESK--LKKRPGVLIVEKLELSGIDFLWQISLAAPEE 723
Query: 736 DIAFRAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPE 794
+IA AID + ++S L P+L+ + H FI EC +RL+A +TIG + +
Sbjct: 724 EIAEMAIDFILDLSYKFLSPRLKKDVVSLHHRFINECYNRLKAVAETIGDTAMTTAVSNA 783
Query: 795 ARQIWTALAQEAI 807
+ + EAI
Sbjct: 784 TKTLTAMAVSEAI 796
>gi|170583692|ref|XP_001896697.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
gi|158596044|gb|EDP34458.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
Length = 2976
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 162/588 (27%), Positives = 293/588 (49%), Gaps = 73/588 (12%)
Query: 34 KFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLS 93
+ P L L ++ +RWVVPVLP+QELE L++ AI L K +D S+ + F +GL
Sbjct: 313 ELPSGMLTRLFDQLHRARWVVPVLPKQELEGLMEVAIVLIKRGTDKTSKFFEGFLEKGLE 372
Query: 94 ISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP------LLDILTMVFN 147
++F K++ D+A+ WK IH I+ + + L + K+ Q + IL V +
Sbjct: 373 VAFDKLMNDEAMKDWKIEIHRFIWLSVARFLIMFTEKMRQTLVAEDFHHSYWKILQYVMS 432
Query: 148 PCNKFHTFNSNQQSISVPVNSNIAD----DEIFARPIDYYKNQRGWLVDLINLFGSMGGF 203
++FH N +++ + + + ++ I Y + + WL+ L+ FG +GGF
Sbjct: 433 SNSRFHMQNYGRKADFLEMEFDPSELMRYTSINTVEEVYQRVLQLWLLLLLTYFGKIGGF 492
Query: 204 QIL---LERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTD 260
++ LER N++T I +RPF L I++ F P ++I
Sbjct: 493 TLMKNFLERNVNETT-KITDFIDWLRPFASCSLLLKPSIIIETFGPTIQIA--------- 542
Query: 261 EELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESK 320
AR+ H +D E+ E + K NES
Sbjct: 543 --------------------------VARLEHMDDKELKCETV---------KGDLNESP 567
Query: 321 NDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIA 380
++ +++S L+ + H +Q+ F L+ ILR+LQ++ F G++ AL E++ V+
Sbjct: 568 YVELAKVLQSLLLINPEMIH---LGRQMPFFSLRYILRVLQVAPFAGRIAALEELHMVLH 624
Query: 381 GVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKAL 440
A +E ++ + + +W++ +++EI++RD+LH P Y E+LE++ R L++ A+
Sbjct: 625 NAA--SEFRQQELVISMNDLTEWLRKQHLIEILVRDNLHHPSYCERLERVFRVLLERNAI 682
Query: 441 SLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEK 500
++ DLD +W Q KHD I +NVH+L+AKL + HLF + SWT ++ +Q
Sbjct: 683 TIDDLDILWNVQHEKHDVIQRNVHDLIAKLVNGLNNTLQKHLFERMKESWTKSSARQRTL 742
Query: 501 LLELIRRLAEDDK---DGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQE 557
LL+LIRR+ D + + K L+L W L H + + ++++ AL +H +L+ + E
Sbjct: 743 LLDLIRRIGVDFSSLTEKELTIKSLSLLWDLFHDERLPVEMIDAALEAHFNVLESAVPAE 802
Query: 558 RDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDIC-----CLYEPGQNL 600
++ +++ CI+E + +V+PAL+ ++ + C Y G+ +
Sbjct: 803 ELRRH--YIERCIDELLLDSVFVLPALKHMQRLMMLMPECDYSTGRKV 848
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 678 PDRQLTESGLKCFEKFFKSVNIGEGKLVLKVKKRS-LLLDNADLIGAEYLWRVITNAGED 736
P L E G CF+ F+ ++N KL + S L+ + DL G +YLW ++ A +
Sbjct: 983 PVELLNEEGFSCFKTFWIAINKRHSKLFQPTEGMSHYLMCDFDLEGMDYLWEIMLQARAE 1042
Query: 737 IAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
++ AI L + + + S +T + +C L+ +D +
Sbjct: 1043 VSHLAISLWVGILANPHTAVISDFANLIQTVVNKCFIMLKTKHDDL 1088
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 791 ILPEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVL 843
+ P+A ++W AL +++F +R F+ F M D+ D+DPK + F +L
Sbjct: 929 MTPQANELWDALIVQSVFEYERTYGFQLFGT-MQDQQDIDPKALDQLFTSRIL 980
>gi|260821294|ref|XP_002605968.1| hypothetical protein BRAFLDRAFT_126572 [Branchiostoma floridae]
gi|229291305|gb|EEN61978.1| hypothetical protein BRAFLDRAFT_126572 [Branchiostoma floridae]
Length = 2450
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 218/840 (25%), Positives = 363/840 (43%), Gaps = 119/840 (14%)
Query: 19 SHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSD 78
S R++G G G +FP L L+S+ ++ W +P + L + AA L K
Sbjct: 60 SSREQGE--GEGENLEFPAGNLYELESRTFTNSWSIPYRRHESLGRCLLAATRLAKEGLA 117
Query: 79 VDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP- 137
E C+RF L +F K+LT V +WK I IY Q L++L+ +L P
Sbjct: 118 EADENCRRFMDGVLPDAFNKLLTSTYVTTWKGEIQEGIYTMSQLLVDLVAARLKHPPLPV 177
Query: 138 -LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFARPIDYYK--NQRGWLVDLI 194
LL +L+ VF+P FH N ++ + + S + + +A Y + GWLV+L+
Sbjct: 178 NLLYLLSTVFDPDVNFHVKNRSRPAERLHWASVFGEGKTYAISPAYATGCDPCGWLVNLV 237
Query: 195 NLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEI 254
N +G GGFQ L + + A +RP YL + P +E+
Sbjct: 238 NRWGEKGGFQQLFGDESQVLCWSEEELAAALRPVACAAPYLNHNVLQPLLKPPMELAHTK 297
Query: 255 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKE 314
L++L ++L+ +A E ++++ LA Q+ + L++LTD +
Sbjct: 298 LQSLLTDDLRSKATQE-------LLLQLMGQLACST--QQSGKGCQYSLQHLTDNYCYQS 348
Query: 315 AKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNE 374
K A+ +QL + Q S NG+ N L++
Sbjct: 349 QHYGPKMAAL---------------------RQLGEL-------IEQSSGTNGRTNGLDQ 380
Query: 375 VNKV-------IAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKL 427
+ + + A H E L + I N+VL+ L S+HQ QY +++
Sbjct: 381 QHLLCWLQENSVLKYALEGSIHQENSVLK-YALEGSIHQNSVLKYALEGSIHQAQYADRV 439
Query: 428 EKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQ 487
+K+L+FL L+ ++ +W Q + + +N+H LL A F QL+HLF Q
Sbjct: 440 KKLLQFLAPN--LAKKEISNIWKMQENQPIVVAENIHGLLVHAAEQFDEEQLEHLFRLIQ 497
Query: 488 ASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHL 547
SW+++ E LL+L+ +LA + + VL++ W +AH + ++ QAL H
Sbjct: 498 TSWSNSTHATQELLLQLMGQLACSTQQSGIIHHVLSMLWDMAHLPALPRPLLHQALNQHS 557
Query: 548 KILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAP-- 605
IL ++ SQ + W+Q C+ E KS ++VVPAL+ I +I +N+ ++ P
Sbjct: 558 TIL-FNTSQITTATRKEWVQQCVHEVKS-ARFVVPALQHIMNIL------RNMLNNMPQK 609
Query: 606 -LSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKV---IA 661
+ S N Q ++ +L+ + I + +Q + L+E + +
Sbjct: 610 LMRSFIQDMNRTQDLVKVLVTSLITIHKTAKSSTESMQAPALVDDKFGLDECVQTHLSMI 669
Query: 662 GVA------YYP-HR-------------HPEEE------WLT-------PDRQL------ 682
GV + P HR EEE WL P+ Q+
Sbjct: 670 GVILEDGELFLPWHRLRDLWDCLVSGPTASEEERELCWRWLQGRLNDLEPEPQMNLMKER 729
Query: 683 ---------TESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNA 733
T +G +CF+ FF+SVN E + L+ L ++ ++L+G +Y+WRV +
Sbjct: 730 LFKVPPTQLTTTGFQCFQSFFESVN--EEQHGLRKLVSILQVEKSELLGLDYVWRVALES 787
Query: 734 GED-IAFRAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPI 791
+D +A AI +L S T+L PKL+ HK F EC RL A +G S + +
Sbjct: 788 VQDEVADLAISMLIRYSYTNLAPKLKKEPLTVHKKFFEECQKRLLAAQSVLGESAIAKAV 847
>gi|182888363|gb|AAI60138.1| Ubiquitin specific peptidase 24 [synthetic construct]
Length = 2460
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 210/804 (26%), Positives = 345/804 (42%), Gaps = 191/804 (23%)
Query: 82 EPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LL 139
E C+RF + +F K+LT AVH W IH IYN L+EL+ ++ QD P LL
Sbjct: 58 ENCRRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPTGLL 117
Query: 140 DILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWLVDLINLF 197
+LTM FNP N++H F + + + +FA P+ ++ + GW+VDL+N F
Sbjct: 118 GVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVSPVSTFQKEPHGWVVDLVNKF 176
Query: 198 GSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILEN 257
G +GGF + + ++ + + + ALI+P G EYL + P+L+ P IL
Sbjct: 177 GELGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNSSVV----QPMLD--PVILTT 229
Query: 258 LTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKN 317
+ D +E +K +L++ +PE+L
Sbjct: 230 IQDVRSVEEKD-----------LKDKRLVS-----------IPELL-------------- 253
Query: 318 ESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNK 377
+ KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV K
Sbjct: 254 -----------SAVKLLCMRF--QPDLVTIVDDLRLDILLRMLKSPHFSAKMNSLKEVTK 300
Query: 378 VIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKE 437
+I + + DR+ W+ +N+VL I L ++ Q QY ++++ I+ L
Sbjct: 301 LIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELL--G 355
Query: 438 KALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQ 497
LSL +L +W Q+G+ +++N+H ++A A F+ QL+HLFV Q
Sbjct: 356 SKLSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSDQLNHLFVLIQ---------- 405
Query: 498 TEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQE 557
KVL++ W LAH + + +++QAL HL IL + +
Sbjct: 406 ----------------------KVLDVLWELAHLPTLPSSLIQQALEEHLTILSDAYAV- 442
Query: 558 RDKQKTIWLQTCIEEFK-----SNPK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRS 610
++ K ++ CIE+ K +NP+ WVVPALRQ+ +I +RS
Sbjct: 443 KEAIKRSYIIKCIEDIKRSSQLNNPQFVWVVPALRQLHEI-----------------TRS 485
Query: 611 HSSNNRQ----SIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY- 665
Q SII L KN ++ L+T +L + ++++ L+ V Y
Sbjct: 486 FIKQTYQKQDKSIIQDLKKNFEIVKLVTGSLIACHRLAAAVAGPGGLSGSTLVDGRYTYR 545
Query: 666 -YPHRH-------------------PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEG 702
Y H +E W L + + E + CFE F K + E
Sbjct: 546 EYLEAHLKFLAFFLQEATLYLGWNRAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLES 605
Query: 703 KL--------VLKVKKRSLLLDNADL-----------------------------IGAEY 725
+ +LK++ + ++ +L IG ++
Sbjct: 606 DVQQQLFKEKILKLESYEITMNGFNLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDF 665
Query: 726 LWRV-ITNAGEDIAFRAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIG 783
+W++ + + E+IA AI L+ S +L P+L+ HK FIA+C RL A +G
Sbjct: 666 IWKIAMESPDEEIANEAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG 725
Query: 784 LSHTYRPILPEARQIWTALAQEAI 807
T + A ++ TA A +
Sbjct: 726 -GPTLTHAVTRATKMLTATAMPTV 748
>gi|156393533|ref|XP_001636382.1| predicted protein [Nematostella vectensis]
gi|156223485|gb|EDO44319.1| predicted protein [Nematostella vectensis]
Length = 2450
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 169/597 (28%), Positives = 272/597 (45%), Gaps = 83/597 (13%)
Query: 1 PPPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQ 60
PPPP D+ +S S + EG +FP L L+ ++ W +P E+
Sbjct: 60 PPPPY-----DEVVSGSDPAKGEGP-------LEFPTTNLYELEDRVFVESWSIPYKREE 107
Query: 61 EL-ECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNN 119
L +CLI A + + D E C+RF L F K+LT +AV W IH+ IY+
Sbjct: 108 SLGKCLISAERFAAEGLLEAD-ENCRRFVERALPECFKKLLTSEAVMRWNPEIHDGIYDM 166
Query: 120 CQKLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA 177
L++L+ +L + P LL +LT F+P KF T N + DD+ +A
Sbjct: 167 VCLLIDLVATRLKYEPVPYGLLQVLTQAFDPETKFQTKNKTKGWDKAYYEGVFGDDQCYA 226
Query: 178 RP---IDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEY 234
+P +YY ++ G G ++ +F K
Sbjct: 227 QPPQNANYYSTEK----------GPCGWLVNIINQFAEKGGF------------------ 258
Query: 235 LTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDA-ISVIIKSCKLLAARVPHQ 293
EE++K +N K A ++ ++K + A + Q
Sbjct: 259 --------------------------EEIRKLIENTEKVTAPVTALLKPIGVCAGYLNAQ 292
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+E+ ++LE T +++ A ++ K + + L V ++ RL
Sbjct: 293 VISEVFSQVLEK-TLAYIQELADDDMKQKEVGKVFDLLTTLKLLCLTLWQEVTGVDDLRL 351
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIV 413
++ L++L+ FN KMN+L EV K+I + ++ + +AKW+ DN VL +
Sbjct: 352 EVALKMLKAPHFNAKMNSLKEVCKLIDDSEKCKNVKIS---ISQEAIAKWLVDNRVLSVA 408
Query: 414 LRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWD 473
+LHQ QY ++L+ ++ FL L+L +L +W Q GKH V N+H +LA A
Sbjct: 409 FESNLHQTQYCDRLKVVVEFL--GNRLTLDELTTIWKMQLGKHPIEVDNIHNILATAAVR 466
Query: 474 FSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDD 533
F+ QLDHLF Q SW + N + +KLL LI R+ ++ + + KVL+L WSLAH
Sbjct: 467 FNTNQLDHLFTLIQQSWGTENDRMKDKLLVLIGRIGKEARVAKITTKVLDLLWSLAHLPS 526
Query: 534 VMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
+ TD+++QAL SH+ IL S + +D+ K + CIE+ K V+P L + DI
Sbjct: 527 LTTDMVDQALKSHIDILSDSFTV-KDQIKKSYAVKCIEDIKKGG--VLPELNKTYDI 580
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNA-GEDIAF 739
+L+ G +CF FF+SVN E K K + ++ DLIG +YLWR+ E+IA
Sbjct: 695 KLSMKGFQCFRAFFESVNHNEHKH--KKTANTYTVEKMDLIGLDYLWRIALEVPSEEIAA 752
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRL 775
A+ LL ++S T L PKL+ HK FI EC RL
Sbjct: 753 PAVKLLIQLSYTWLSPKLKKDPVTIHKKFIMECYKRL 789
>gi|358254820|dbj|GAA56408.1| ubiquitin carboxyl-terminal hydrolase 9/24 [Clonorchis sinensis]
Length = 2915
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 121/281 (43%), Positives = 169/281 (60%), Gaps = 15/281 (5%)
Query: 364 SFNGKMNALNEVNKVIA-----GVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSL 418
SFN +M ALN++N + + G+ P + LT DR+A W+ D VL ++LR++L
Sbjct: 188 SFNKRMMALNDLNSLFSRLSPSGIPSQSSYSPSSDTLTIDRIATWMHDKQVLGLMLRENL 247
Query: 419 HQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQ 478
HQ QYVEK E+I+RF++K L+ DLD +W AQ GKH I KNV ++LA+LA +F+P Q
Sbjct: 248 HQLQYVEKAERIIRFMVKHAYLTTADLDQIWEAQDGKHQTIAKNVFDMLARLALEFTPEQ 307
Query: 479 LDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDI 538
LDHLF FQ SW+ A ++Q E L++LI RLAE+D+DG+MA KVLNL W LA D DI
Sbjct: 308 LDHLFHRFQQSWSHATKRQREHLIDLICRLAEEDRDGLMAAKVLNLLWELAVDADSSPDI 367
Query: 539 MEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPK--WVVPALRQIKDICCLYEP 596
AL +H KILD++ S+ ++ W+ I K P+ ++PA+RQ +I L P
Sbjct: 368 SSFALKAHAKILDHNISEVGSNIRSKWITRLIGILKGGPREPHLLPAIRQFTEILNLI-P 426
Query: 597 GQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNL 637
+ +SH S R I L HSL+ I NN+
Sbjct: 427 AKQYSSHT-------SYLARMKTIQELNARHSLLESIVNNV 460
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 19/126 (15%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRS--------------LLLDNADLIGAEYL 726
LT SG+ F+ FF VN G L+ S L DNADL G + +
Sbjct: 579 HLTASGMMLFKIFFYQVNYQLGYLLSSGVGNSSAGNSGLTSSVDLQFLTDNADLCGLDNI 638
Query: 727 WRVITNAGEDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGL-- 784
WR++ +A +A A+ LL+++ T+L P+L + H+ + C RLRA YDTI +
Sbjct: 639 WRILLDAPSSVALEAMQLLEKLYTNLSPQLLPQKRERHEDLLQHCFSRLRADYDTIHILM 698
Query: 785 ---SHT 787
SHT
Sbjct: 699 NSESHT 704
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 5 QPGT--SSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQEL 62
+PG+ SSD+ S +S + + T FP + L+S ++ +WVVPVLP+ L
Sbjct: 25 KPGSPVSSDQSASNDTSPKADVTQN----LLDFPTQSWTTLNSCLNMVKWVVPVLPDSHL 80
Query: 63 ECLIKAAIELCKTNS 77
E L+KAAIEL K ++
Sbjct: 81 EILLKAAIELAKQDT 95
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 190 LVDLINLFGSMGGFQIL---LERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMP 246
L D I+LFG + GF+ L RF + +T+ +I + PF +YL TI +YF+P
Sbjct: 124 LKDFIDLFGRLNGFERLKGRFLRFAELNDMTLCLIATYLYPFSLCCDYLHPDTITEYFVP 183
Query: 247 IL 248
I+
Sbjct: 184 IV 185
>gi|324499618|gb|ADY39840.1| Ubiquitin carboxyl-terminal hydrolase FAF-X [Ascaris suum]
Length = 2917
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 152/587 (25%), Positives = 286/587 (48%), Gaps = 77/587 (13%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
P LA L +++ RWVVPVLP+QELE L++ I L + D + F +GL +
Sbjct: 253 LPSPMLAKLLEQLNRQRWVVPVLPDQELEVLMEIGIRLIRKGLDGKARYFDSFLEKGLVV 312
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP------LLDILTMVFNP 148
++ K++ D+A+ WK +IH I+++ + + KL Q + P IL N
Sbjct: 313 AYDKLMHDEAMKEWKPDIHRFIWHSVLRYFVMFTEKLRQTLHPEEIHDAYWTILWQTMNC 372
Query: 149 CNKFHTFNSNQQSISVPVNSNIADDEIFARPID---YYKNQRGWLVDLINLFGSMGGFQI 205
N+FH N N+ + + + AD + F +D + + WL+ L+N FG + GF++
Sbjct: 373 HNRFHRHNKNRPIDMLQSDVDPADLQRFTLSVDDERIHSHHGVWLLLLLNRFGRLDGFEL 432
Query: 206 L---LERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEE 262
+ L+ N+ T +I +RP + L I F + I + L L++ +
Sbjct: 433 IKAFLKENVNEETNAAQLI-EWMRPVASCAQVLKPELISDVFQHTITIALDRLRKLSNSD 491
Query: 263 LKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKND 322
LK E +++ + + P ++E L
Sbjct: 492 LKCEQVKGDLRESLMIEL-------------------PRVIEAL---------------- 516
Query: 323 AISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGV 382
++ + LL K++ F L+ ILR+LQ++ F G++ AL E+ ++ V
Sbjct: 517 ----VVPNPTLLP--------IGKEMFFFVLRYILRVLQVAPFAGRIAALEELQAILLNV 564
Query: 383 AYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSL 442
+ + +A+W++ + +EI+ RD+LH P + E+LE+++R L+++ A+
Sbjct: 565 T-------QCSIIPIGEIAEWLRKQSTIEILFRDNLHHPAFCERLERVVRVLLEKNAIIP 617
Query: 443 GDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLL 502
+LD +W AQ KHDA+ +N H+L+AKLA F+ + LF + SWT+++ ++ LL
Sbjct: 618 DELDIMWDAQKEKHDAVQRNFHDLIAKLASAFNNQLQERLFARMKQSWTNSSSRERTLLL 677
Query: 503 ELIRRLAEDDKDG---VMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERD 559
+LIRR+ D + + + L+L W L + + ++M+ AL +H I++ S ++ D
Sbjct: 678 DLIRRIGIDSSENAERALTLRSLSLLWDLFRDERLCVELMDAALDAHYSIIE-SVTRADD 736
Query: 560 KQKTIWLQTCIEEFKSNPKWVVPALRQIKDIC-----CLYEPGQNLN 601
++ ++ CIEE ++ +V+ L+ ++ + C + +N++
Sbjct: 737 VRRE-YIHKCIEELLTDSVFVLSTLKHMQRLMMIAPDCTFSATKNMS 782
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 57/101 (56%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
L E G CF+ F+ +VN GKLV LL++ DL G +YLW +I A ++++ RA
Sbjct: 919 LNEEGFSCFKTFWTAVNKLAGKLVQPPSSIHFLLNSFDLEGHDYLWEIILKARDNVSRRA 978
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
+L ++ ++ + S + Q ++ I +C L+A++D +
Sbjct: 979 TELWVDIFSNPHADMVSDVGQLNEFVINKCFTMLKANHDEL 1019
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 791 ILPEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVL 843
+ P+A ++W AL A+F +R F+ F+ M ++ D+DPK + FFE +L
Sbjct: 861 MTPQANELWDALVVNAVFEFERTYGFQLFAS-MQEQEDIDPKALDPFFETRIL 912
>gi|326435105|gb|EGD80675.1| hypothetical protein PTSG_11701 [Salpingoeca sp. ATCC 50818]
Length = 2557
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 152/528 (28%), Positives = 259/528 (49%), Gaps = 81/528 (15%)
Query: 82 EPCQRFFREGLSISFTKILTDDAVHSWK----YNIHNCIYNNCQKLLELIVLKLGQDVFP 137
+ C+ F ++ L L + + W +I + N+ L+ ++ ++ D
Sbjct: 90 DSCETFLKDVLLPCILTCLNSEQLLKWSPDYLVDIRQLLINS----LDALIPRMDSDDTQ 145
Query: 138 LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFAR-PIDYYKN-QRGWLVDLIN 195
+ + + N +H ++S+S P+N DE++A +D + Q G+L+D+ +
Sbjct: 146 YIRVTAQMMNYRTLYHQQVWCEKSMSAPLN---GPDEVYALFSVDTETDSQYGFLIDICD 202
Query: 196 LFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTIL---KYFMPILEIVP 252
FG GGF+ L+ N + + V+ A F H LP+ + ++ P+ + +
Sbjct: 203 AFGVKGGFKRALQIVTNPESSLVQVVLAASCTFFSGH----LPSDMCREQFVYPMFDKMY 258
Query: 253 EILENLTDEELKKEAKNESKNDAISVIIKSCKL-LAARVPHQEDTEIVPEILENLTDEEL 311
+ + N T +EL+ K++ I I++ KL LAAR +D E V +L+NL
Sbjct: 259 DRVLNATLKELRPLVPELVKDNGILSAIRNAKLVLAAR----QDIE-VNRVLDNL----- 308
Query: 312 KKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNA 371
L +I ++L++ SFN M A
Sbjct: 309 ----------------------------------------HLAVIDKMLRVQSFNATMYA 328
Query: 372 LNEVNKVIAGV--AYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEK 429
L+E+ +I + P + +T + W+ + +LE++ D+LH+ YV ++++
Sbjct: 329 LDELKGLIHRINAQSKPDARFQFTAVTAGELTDWMAEKKLLELLFSDNLHKTSYVNRVQE 388
Query: 430 ILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQAS 489
I+RF + L+L DL+ +W AQ GKH IV N+H+LLA LA+ F P QLDHLF QAS
Sbjct: 389 IVRFTATTR-LTLQDLELIWKAQEGKHGVIVDNIHDLLAHLAYHFGPEQLDHLFSLVQAS 447
Query: 490 WTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKI 549
W +++ +LL LI+RLAE+D G MA KV+ + WSLAH+ D +I ++A+AS +KI
Sbjct: 448 WGGSDQNMM-RLLRLIQRLAEEDAAGEMAHKVMEVVWSLAHNPDTSHEIADEAVASMVKI 506
Query: 550 LD---YSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLY 594
L + + D K WL C+ E K +WVVPA+R ++ + L+
Sbjct: 507 LQGRFFHDASGADVNK--WLDACLRELKEQ-RWVVPAMRMMEALLDLF 551
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 26/181 (14%)
Query: 672 EEEWLTPDRQLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNA-DLIGA---EYLW 727
E+ W+ P ++ E+ L F + S + +VL R L D DL A +
Sbjct: 533 EQRWVVPAMRMMEALLDLFSRHSDSKHASPRDVVLNRLLRQGLQDAVLDLCEAYQEKAKQ 592
Query: 728 RVITNAGEDIAFRAID--LLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLS 785
R+ G++ +A+D ++ E+STH ++++ Q HK H+ +
Sbjct: 593 RLEALGGDE---KALDNTVVFEMSTH-----RATMQQLHKLL----------HF-IVAER 633
Query: 786 HTYRPILPEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHF 845
+Y L +A ++W L + A DR A +WFS+++ +PDLD + E H+LH
Sbjct: 634 ESYMA-LDDAVRLWLMLVEGAPTAKDRTAGLRWFSRVLVPDPDLDADAQRFLLENHLLHM 692
Query: 846 E 846
+
Sbjct: 693 D 693
>gi|449671706|ref|XP_002156037.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like, partial
[Hydra magnipapillata]
Length = 743
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 154/563 (27%), Positives = 253/563 (44%), Gaps = 73/563 (12%)
Query: 34 KFPVEKLAILDSKISSSRWVVPVLPEQEL-ECLIKAAIELCKTNSDVDSEPCQRFFREGL 92
+FPV L L+ +I + W +P + L +CL A SD+D+ C F L
Sbjct: 105 EFPVTNLYELEERIFTENWSIPFKKNESLAKCLYSATKLAFYEKSDIDTN-CAHFVDRIL 163
Query: 93 SISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLDILTMVFNPCN 150
F+K++ AV W+ +IH ++N Q ++ +L P LL IL F+P +
Sbjct: 164 PECFSKLMFSPAVRKWQPDIHEGVFNMVQLFIDFAATRLKYQPLPVKLLGILCKCFDPES 223
Query: 151 KFHTFNSNQQSISVPVNSNIADDE---IFARPIDYYKNQRGWLVDLINLFGSMGGFQILL 207
+FH F + + + +I E + P YK+ GWLVDL N F GG L+
Sbjct: 224 EFH-FKNRSRKWNRTYYEDIFGYEKCPAMSPPYTSYKDPFGWLVDLFNRFSLKGGLDALI 282
Query: 208 ERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEA 267
+ N LT ++ L +P G YL
Sbjct: 283 SQINNVEALTPNILSCLWKPLGLCAPYLN------------------------------- 311
Query: 268 KNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVI 327
D +S+ + C +++ +T ELK+ E + D + +
Sbjct: 312 -----KDVLSIKLSDC---------------ASNVVKFVT--ELKESDMKEKEVDKVFDL 349
Query: 328 IKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPH 387
+++ ++ + D + L +L++L I+ FN +MNAL E+ ++I
Sbjct: 350 LRTLSVVCEAL--WSDKTTHVNQLHLSTLLKMLHIAHFNSRMNALKELCRLIKDCE---S 404
Query: 388 RHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDA 447
+ L D + KW+ DN VL I + LHQ QY EKL+K++ F+ + +SL +L
Sbjct: 405 KERGTNVLQYDVIMKWMLDNKVLSIAFSNILHQSQYCEKLKKVVEFVCTK--ISLEELTT 462
Query: 448 VWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANR---KQTEKLLEL 504
+W+ Q+GKH +V N+H ++A A +FS QLDHL QAS ++ K E +L +
Sbjct: 463 IWSMQSGKHITVVDNIHNIIASAAQNFSTKQLDHLIELIQASLKESDNDEGKANEGILIM 522
Query: 505 IRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTI 564
+ ++ D D + K+L + W H+ D+ ++ Q + SHL IL S + + K
Sbjct: 523 VGKIGRDIHDEKIVIKLLGMLWDYWHTTDLPLCLLNQTVQSHLDILTDS-TVIKAPVKLD 581
Query: 565 WLQTCIEEFKSNPKWVVPALRQI 587
++ C+ + KS VVPALR I
Sbjct: 582 YISKCVADLKSKTV-VVPALRHI 603
>gi|402588100|gb|EJW82034.1| hypothetical protein WUBG_07056 [Wuchereria bancrofti]
Length = 624
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 264/552 (47%), Gaps = 85/552 (15%)
Query: 77 SDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVF 136
+D S+ + F +GL ++F K++ D+A+ WK IH I+ + + L + K+ Q +
Sbjct: 31 TDRTSKFFEGFLEKGLEVAFDKLMNDEAMKDWKIEIHRFIWLSVARFLIMFTEKMRQTLV 90
Query: 137 P------LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIAD----------DEIFARPI 180
IL V + ++FH N +++ + + + ++ +E++ R +
Sbjct: 91 AEDFHHSYWKILQYVMSSNSRFHMQNFGRKADFLEMEFDPSELMRYTSINTVEEVYQRVL 150
Query: 181 DYYKNQRGWLVDLINLFGSMGGFQIL---LERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
+ FG +GGF ++ LER N++T I +RPF L
Sbjct: 151 QLWLLLLL------TYFGKIGGFTLMKNFLERNVNETT-KITDFIDWLRPFASCSLLLKP 203
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
I++ F P ++I AR+ H +D E
Sbjct: 204 SIIIETFGPTIQIA-----------------------------------VARLEHMDDKE 228
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+ E + K NES ++ +++S L+ + H +Q+ F L+ IL
Sbjct: 229 LKCETV---------KGDLNESPYVELAKVLQSLLLINPEMIH---LGRQMPFFSLRYIL 276
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+LQ++ F G++ AL E++ V+ A +E ++ + + +W++ +++EI++RD+
Sbjct: 277 RVLQVAPFAGRIAALEELHMVLHNAA--SEFRQQELVISMNDLTEWLRKQHLIEILVRDN 334
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
LH P Y E+LE++ R L++ A+++ DLD +W Q KHD I +NVH+L+AKL +
Sbjct: 335 LHHPSYCERLERVFRVLLERNAIAIDDLDILWNVQHEKHDVIQRNVHDLIAKLVNGLNNT 394
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDK---DGVMADKVLNLFWSLAHSDDV 534
HLF + SWT ++ +Q LL+LIRR+ D + + K L+L W L H + +
Sbjct: 395 LQKHLFERMKESWTKSSARQRTLLLDLIRRIGVDFSSLTEKELTIKSLSLLWDLFHDERL 454
Query: 535 MTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDIC--- 591
++++ AL +H +L+ + E ++ +++ CI+E + +V+PAL+ ++ +
Sbjct: 455 PVEMIDAALEAHFNVLESAVPAEELRRH--YIERCIDELLLDSVFVLPALKHMQRLMMLM 512
Query: 592 --CLYEPGQNLN 601
C Y G+ +
Sbjct: 513 PECDYSTGRKIT 524
>gi|167518407|ref|XP_001743544.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778643|gb|EDQ92258.1| predicted protein [Monosiga brevicollis MX1]
Length = 2279
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 156/601 (25%), Positives = 269/601 (44%), Gaps = 95/601 (15%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEP-CQRFFREGLS 93
FP + L L++K+ + W VP+ L +A + L + NS +++ RF
Sbjct: 4 FPSQSLEELENKVLAPSWTVPLESNGPLVVCTQALLRLLQANSSFEADDVATRFLHGVFH 63
Query: 94 ISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP-LLDILTMVF-NPCNK 151
S+ K+L DAV +WK NI + I E + +G P L +++ + +
Sbjct: 64 ESYAKLLDSDAVRTWKSNIISLIEEKMPLFAETLAYVVGASDHPELYNLVALALCDDAEL 123
Query: 152 FHTFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQ 211
+H + S S+ ++ + Q G D++N+FG GG
Sbjct: 124 YHRCGTGASSTSLQSSA-------------FACRQYGLWPDVVNIFGHHGG--------- 161
Query: 212 NKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKK-EAKNE 270
F I + E + +L+ ++ P++ +++ D+ L A+
Sbjct: 162 ----------FQRIAAYA-AREDVPFENLLQLARISVQASPDLKDSVRDQVLAPIWARFN 210
Query: 271 SKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKS 330
+K D +S +++LKK A + ++
Sbjct: 211 TKFDGMS------------------------------NDDLKKLAPH---------VLGK 231
Query: 331 CKLLA--ARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHR 388
LLA A P D+V +LRLL+ SF+ M+ + +++
Sbjct: 232 RGLLATFAAFPRLRDSVSPGRPPVYDCMLRLLKCGSFSVTMSVMQFIHEQARYGPSTADV 291
Query: 389 HPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAV 448
+ L+ + +A WI +N++L+I+L+ +LHQ QYV ++ K++ L +K L+ L +
Sbjct: 292 RSRQATLSQEDIAPWIVENDILDILLKGNLHQEQYVRRITKLVTILTSQKMLNQATLKQI 351
Query: 449 WAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRL 508
W AQ GKH+ IVKN+HELLA++AWD + L +LF F+ SW ++ + LL L+RRL
Sbjct: 352 WDAQGGKHETIVKNLHELLAEIAWDLTGDNLHYLFELFKESWGGSDENR-RNLLTLMRRL 410
Query: 509 AEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQT 568
AE+D MA++VLNL W L H D +I+ AL +H IL + +QE +++ W+ T
Sbjct: 411 AEEDTHNTMANQVLNLLWDLVHDDTASREIITAALEAHCHILLHGYNQEAERRH--WINT 468
Query: 569 CIEEFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHS 628
+E + K V+ +++Q+ I Y S S SS+ R + I+N
Sbjct: 469 LVEAIGAE-KDVLLSVQQLHRILKYY-------------SNSASSHTRHKELFTFIENSK 514
Query: 629 L 629
L
Sbjct: 515 L 515
>gi|194332819|ref|NP_001123721.1| ubiquitin specific peptidase 9, X-linked [Xenopus (Silurana)
tropicalis]
gi|189441598|gb|AAI67347.1| LOC100170466 protein [Xenopus (Silurana) tropicalis]
Length = 275
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 119/186 (63%), Gaps = 6/186 (3%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP LA LD I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+I
Sbjct: 68 FPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTI 127
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKILTD+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 128 SFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHI 187
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRG------WLVDLINLFGSMGGFQILLE 208
+N + S +VP +A+DE+FARP D + WL +L+ M Q L+
Sbjct: 188 YNGTRPSETVPAGVQLAEDELFARPPDPRSPKVSLFFFTVWLTELLPFQMCMIKAQPFLD 247
Query: 209 RFQNKS 214
+ +KS
Sbjct: 248 IWNDKS 253
>gi|449678491|ref|XP_004209099.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like, partial [Hydra magnipapillata]
Length = 183
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 126/190 (66%), Gaps = 7/190 (3%)
Query: 92 LSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNK 151
++ISFTK+L DDAV +WK+ IH CI N +KL+EL V+KL QD FPLLD+L + NP +K
Sbjct: 1 MTISFTKVLMDDAVSTWKFEIHKCILKNTEKLIELCVVKLEQDWFPLLDLLAIALNPNSK 60
Query: 152 FHTFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQ 211
FH FNS + P + FAR D + +GWLVDL+N FG +GGF L R
Sbjct: 61 FHLFNSARNHEFTPSHG------WFARCNDC-RQPKGWLVDLVNQFGDLGGFHKLQHRIC 113
Query: 212 NKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNES 271
+ L ++ ALI+PFG E LT T+ ++ +P+++ + L+++TDE LKKE+KNE+
Sbjct: 114 DMGGLNAQIVCALIKPFGLCAEVLTEHTVEQFLLPVVKSIKNFLDSITDEILKKESKNEA 173
Query: 272 KNDAISVIIK 281
KN+AISVIIK
Sbjct: 174 KNEAISVIIK 183
>gi|302812074|ref|XP_002987725.1| hypothetical protein SELMODRAFT_447079 [Selaginella moellendorffii]
gi|300144617|gb|EFJ11300.1| hypothetical protein SELMODRAFT_447079 [Selaginella moellendorffii]
Length = 2442
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 148/560 (26%), Positives = 248/560 (44%), Gaps = 105/560 (18%)
Query: 33 CKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAA--IELCKTNSDVDSEPCQRFFRE 90
C+FP ++L + ++ W V P CL AA + + D Q +RE
Sbjct: 56 CEFPRDELGTVLDGLNKFPWTV--YPIHLRNCLSAAAKIVSGGREEFGGDFRKLQTLYRE 113
Query: 91 GLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVF----------PLLD 140
+ +F K L D A+ W IHN I++ KL++L+ +K Q + PLL
Sbjct: 114 AVPSAFEKCLDDKAIWKWTNEIHNNIFDAVCKLMDLVSVKAPQLLLDDVGVDDDMLPLLR 173
Query: 141 ILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFARPI------------DYY-KNQR 187
L + F+ +FH + Q + + + FARP+ D++ N++
Sbjct: 174 TLAIAFDKQCQFHLKHKEQGLPPSASSVSPPCN--FARPMPGTPSRKASSNNDWHCANRK 231
Query: 188 G--------------------WLVDLINLFGSMG---GFQILLERFQNKSTLTIPVIFAL 224
G WL L+N FG G+Q LL L V+ AL
Sbjct: 232 GAAVRDESCDCNRCRPPDVYCWLAYLLNYFGHTAYGNGYQHLLRVLNYPQKLLPAVMEAL 291
Query: 225 IRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCK 284
+ P + E++T E+ +L D
Sbjct: 292 LLPIARSTEFIT---------------DEVASHLGD------------------------ 312
Query: 285 LLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDT 344
P V ++LE D L + K+ S A+S+I+K +++ R E
Sbjct: 313 ------PCSRILRYVEDLLERDVDA-LSDKTKDGSFG-ALSLILKHLQVILGRSSSAEKA 364
Query: 345 VKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWI 404
I + K++ R+L +SFN +++A+ E+NK++ P ++ + + +W+
Sbjct: 365 ESMTSIVQRKMVERMLGFNSFNKQLSAVREINKLLENARAIA---PRDKSRSVNATIQWL 421
Query: 405 KDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA--QAGKHDAIVKN 462
+ NN+L VLR LH QYV+++EKI+RFL++E+ LS +DA+WAA + + + + N
Sbjct: 422 ERNNILRHVLRSHLHHKQYVDQVEKIMRFLLQERRLSEEHIDAIWAATEKPDQFETVKAN 481
Query: 463 VHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVL 522
+ +LLA LAW FS QLD LF F+ S + K+L L+++LA D GVMA ++L
Sbjct: 482 IFDLLADLAWSFSAEQLDSLFGRFERS-QGRSPSDIVKILSLVKKLARSDTKGVMAQRLL 540
Query: 523 NLFWSLAHSDDVMTDIMEQA 542
L W++ HS + ++++
Sbjct: 541 ELLWNMMHSGEAPAEVLDSG 560
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAFR 740
L+E +CF + F VN+ E KLV + LIG Y+W+ +++ IA +
Sbjct: 760 LSEIAWRCFMRLFLWVNLFEKKLVRIRIDEGTETHDLQLIGMSYMWQAALSSPVNSIAEQ 819
Query: 741 AIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRA 777
+I +L+++ THL L+ +L Q + FI ECL L A
Sbjct: 820 SISMLRDIHTHLSDSLRQNLVQIRQCFINECLRNLTA 856
>gi|302811701|ref|XP_002987539.1| hypothetical protein SELMODRAFT_447032 [Selaginella moellendorffii]
gi|300144693|gb|EFJ11375.1| hypothetical protein SELMODRAFT_447032 [Selaginella moellendorffii]
Length = 2414
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 148/560 (26%), Positives = 248/560 (44%), Gaps = 105/560 (18%)
Query: 33 CKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAA--IELCKTNSDVDSEPCQRFFRE 90
C+FP ++L + ++ W V P CL AA + + D Q +RE
Sbjct: 56 CEFPRDELGTVLDGLNKFPWTV--YPIHLRNCLSAAAKIVSGGREEFGGDFRKLQTLYRE 113
Query: 91 GLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVF----------PLLD 140
+ +F K L D A+ W IHN I++ KL++L+ +K Q + PLL
Sbjct: 114 AVPSAFEKCLDDKAIWKWTNEIHNNIFDAVCKLMDLVSVKAPQLLLDDVGVDDDMLPLLR 173
Query: 141 ILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFARPI------------DYY-KNQR 187
L + F+ +FH + Q + + + FARP+ D++ N++
Sbjct: 174 TLAIAFDKQCQFHLKHKEQGLPPSASSVSPPCN--FARPMPGTPSRKASSNNDWHCANRK 231
Query: 188 G--------------------WLVDLINLFGSMG---GFQILLERFQNKSTLTIPVIFAL 224
G WL L+N FG G+Q LL L V+ AL
Sbjct: 232 GAAVRDESCDCNRCRPPDVYCWLAYLLNYFGHTAYGNGYQHLLRVLNYPQKLLPAVMEAL 291
Query: 225 IRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCK 284
+ P + E++T E+ +L D
Sbjct: 292 LLPIARSTEFIT---------------DEVASHLGD------------------------ 312
Query: 285 LLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDT 344
P V ++LE D L + K+ S A+S+I+K +++ R E
Sbjct: 313 ------PCSRILRYVEDLLERDVDA-LSDKTKDGSFG-ALSLILKHLQVILGRSSSAEKA 364
Query: 345 VKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWI 404
I + K++ R+L +SFN +++A+ E+NK++ P ++ + + +W+
Sbjct: 365 ESMTSIVQRKMVERMLGFNSFNKQLSAVREINKLLENARAIA---PRDKSRSVNATIQWL 421
Query: 405 KDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA--QAGKHDAIVKN 462
+ NN+L VLR LH QYV+++EKI+RFL++E+ LS +DA+WAA + + + + N
Sbjct: 422 ERNNILRHVLRSHLHHKQYVDQVEKIMRFLLQERRLSEEHIDAIWAATEKPDQFETVKAN 481
Query: 463 VHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVL 522
+ +LLA LAW FS QLD LF F+ S + K+L L+++LA D GVMA ++L
Sbjct: 482 IFDLLADLAWSFSAEQLDSLFGRFERS-QGRSPSDIVKILSLVKKLARSDTKGVMAQRLL 540
Query: 523 NLFWSLAHSDDVMTDIMEQA 542
L W++ HS + ++++
Sbjct: 541 ELLWNMMHSGEAPAEVLDSG 560
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAFR 740
L+E +CF + F VN+ E KLV + LIG Y+W+ +++ IA +
Sbjct: 760 LSEIAWRCFMRLFLWVNLFEKKLVRIRIDEGTETHDLQLIGMSYMWQAALSSPVNSIAEQ 819
Query: 741 AIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRA 777
+I +L+++ THL L+ +L Q + FI ECL L A
Sbjct: 820 SISMLRDIHTHLSDSLRQNLVQIRQCFINECLRNLTA 856
>gi|351696095|gb|EHA99013.1| Ubiquitin carboxyl-terminal hydrolase 24 [Heterocephalus glaber]
Length = 2400
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 160/613 (26%), Positives = 272/613 (44%), Gaps = 125/613 (20%)
Query: 292 HQEDTEIVPE----ILENLTD-EELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVK 346
H ED E+ P IL + D ++++ + + +I ++ + KLL R Q D V
Sbjct: 197 HSEDIELAPMLDPVILTTIQDVRSVEEKDLKDKRLVSIPELLSAVKLLCMRF--QPDLVT 254
Query: 347 QLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKD 406
++ RL I+LR+L+ F+ KMN+L EV K+I + + DR+ W+ +
Sbjct: 255 IVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVE 311
Query: 407 NNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHEL 466
N+VL I L ++ Q QY ++++ I+ L LSL +L +W Q+G+ +++N+H +
Sbjct: 312 NSVLSIALEGNIDQAQYCDRIKGIIELL--GSKLSLDELTKIWKIQSGQSSTVIENIHTI 369
Query: 467 LAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFW 526
+A A F+ QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W
Sbjct: 370 IAAAAVKFNSDQLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLW 429
Query: 527 SLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK------------ 574
LAH + + +++QAL HL IL + + ++ K ++ CIE+ K
Sbjct: 430 ELAHLPTLPSSLIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLDKNK 488
Query: 575 ---------SNPK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SI 619
+NP+ WVVPALRQ+ +I +RS Q SI
Sbjct: 489 KDGFKSSQLNNPQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSI 531
Query: 620 IDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPH----------- 668
I L KN ++ L+T +L + ++++ L + V Y +
Sbjct: 532 IQDLKKNFEIVKLVTGSLIACHRLAAAVAGPGGLTGLTLVDGRYTYREYLEAHLKFLAFF 591
Query: 669 ------------------------------RHPEEEWLTPDRQLTESG------------ 686
R EW T + ES
Sbjct: 592 LQEATLYLGWNRAKEIWECLVTGQDVCELDREVCFEWFTKGQHDLESDVQQQLFKEKILK 651
Query: 687 LKCFE------KFFKS----VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGE 735
L+ +E FK+ VN+ + +L K + L ++ +LIG +++W++ + + E
Sbjct: 652 LESYEITMNGFNLFKTFFENVNLCDHRL--KRQGAQLYVEKLELIGMDFIWKIAMESPDE 709
Query: 736 DIAFRAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPE 794
+IA AI L+ S +L P+L+ HK FIA+C RL A +G T +
Sbjct: 710 EIANEAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTR 768
Query: 795 ARQIWTALAQEAI 807
A ++ TA A +
Sbjct: 769 ATKMLTATAMPTV 781
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 21/223 (9%)
Query: 24 GTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQEL-ECLIK----AAIELCKTNSD 78
G G G +FP L L+S++ + W +P E+ L +CL+ A + LC+++
Sbjct: 9 GNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLARLGLCESD-- 64
Query: 79 VDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP- 137
E C+RF + +F K+LT AVH W IH IYN L+EL+ ++ QD P
Sbjct: 65 ---ENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPI 121
Query: 138 -LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWLVDLI 194
LL +LTM FNP N++H F + + + +FA P+ ++ + GW+VDL+
Sbjct: 122 GLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVSPVSTFQKEPHGWVVDLV 180
Query: 195 NLFGSMGGFQILLERFQNK----STLTIPVIFALIRPFGQVHE 233
N FG +GGF + + ++ + + PVI I+ V E
Sbjct: 181 NKFGELGGFAAIQAKLHSEDIELAPMLDPVILTTIQDVRSVEE 223
>gi|224178864|ref|XP_002199442.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like, partial [Taeniopygia guttata]
Length = 155
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 101/139 (72%)
Query: 43 LDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTD 102
+D I+ RWVVPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD
Sbjct: 12 VDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTD 71
Query: 103 DAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSI 162
+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH +N + S
Sbjct: 72 EAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHLYNGTRPSE 131
Query: 163 SVPVNSNIADDEIFARPID 181
+VP +A+DE++ARP D
Sbjct: 132 TVPAGVQLAEDELYARPPD 150
>gi|355728152|gb|AES09433.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X [Mustela
putorius furo]
Length = 140
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 109/140 (77%), Gaps = 1/140 (0%)
Query: 152 FHTFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQ 211
FH +N + SV + + +DE+FAR D ++ +GWLVDL+N FG++ GFQIL +RF
Sbjct: 1 FHIYNGTRPCESVSSSVQLPEDELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFV 59
Query: 212 NKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNES 271
N S L++ +I ALI+PFGQ +E+LT T+ KYF+P++EIVP+ LENLTDEELKKEAKNE+
Sbjct: 60 NGSALSVQIIAALIKPFGQCYEFLTQHTVKKYFLPVIEIVPQFLENLTDEELKKEAKNET 119
Query: 272 KNDAISVIIKSCKLLAARVP 291
KNDA+S+IIKS K LA+RVP
Sbjct: 120 KNDALSMIIKSLKNLASRVP 139
>gi|57114083|ref|NP_001009110.1| ubiquitin specific protease 9, Y-linked [Pan troglodytes]
gi|54781336|gb|AAV40817.1| USP9Y [Pan troglodytes]
Length = 225
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 104/157 (66%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP +LA LD I+ RWVVPVLP+ ELE L++AAI+L DV SE CQRFF++GL+I
Sbjct: 68 FPHTELAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFQDGLTI 127
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKIL D+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 128 SFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPYCKFHI 187
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLV 191
+N + + N+ + DDE+FAR D + W +
Sbjct: 188 YNGTRPCELISSNAQLPDDELFARSSDPRSPKTIWTM 224
>gi|196008375|ref|XP_002114053.1| hypothetical protein TRIADDRAFT_27581 [Trichoplax adhaerens]
gi|190583072|gb|EDV23143.1| hypothetical protein TRIADDRAFT_27581 [Trichoplax adhaerens]
Length = 2077
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 210/448 (46%), Gaps = 64/448 (14%)
Query: 395 LTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAG 454
++ DR+ +W+K VL I L LHQ QY +KL KIL F L L L +W AQ G
Sbjct: 7 ISKDRVLEWLKVKEVLSITLAGYLHQHQYCDKLTKILEFF--GPNLPLDTLSVIWKAQIG 64
Query: 455 KHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKD 514
K V N+H LA + FS QLDHLF Q +W + + EKLL LI ++ ++ +
Sbjct: 65 KGSPTVDNIHNCLAAASIRFSSDQLDHLFNLIQQTWRTETNQNREKLLILIGKIGQEARV 124
Query: 515 GVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYS-CSQERDKQKTIWLQTCIEEF 573
+A KVL+L WSLAH D++ QAL SH+ IL YS +E KQ + CI++
Sbjct: 125 ARIATKVLDLLWSLAHLPTSTADMVTQALKSHMAILSYSYLVKENIKQG--YAIKCIDDI 182
Query: 574 KSNPKWVVPALRQIKDICCLY--------------EPGQNLNSHAPLSSRSHSSNNRQSI 619
K K V+ L + D+ L G L+ + + SR + S
Sbjct: 183 K---KGVIHDLEKSHDVIKLITISLVKCHRAAVSASGGTGLDENTKIDSRYAYAEYLNSH 239
Query: 620 IDILIKNHSLIMLITN-------------------NLCSLLQISSFNGKMNALNEVNKVI 660
+D+L S I+ TN + C+L + + F+ + + ++
Sbjct: 240 LDLL----SFILNCTNICLHWHRARDIWNCLESDPDACNLDRETCFDWFITHIGDLEDEA 295
Query: 661 AGVAYYPHRHPEEEWLTPDRQLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADL 720
+ H ++ L+P + LT G +CF+ +F+ +N E KL V S +++ DL
Sbjct: 296 KSTIF---NHLIQK-LSPSK-LTVKGFECFKTYFECINQNEHKLKCPVPFVS-IVEKIDL 349
Query: 721 IGAEYLWRVITN-AGEDIAFRAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLR-- 776
G YLW+++ + E++A AI+ +++ T++ KL+ + HK FIAE RL
Sbjct: 350 TGISYLWQIVLQVSNEEVANEAINYFIQITCTNVSYKLKKDIGGLHKKFIAEFQKRLEDG 409
Query: 777 ---------AHYDTIGLSHTYRPILPEA 795
AH ++ + P PE+
Sbjct: 410 IAILKQSKVAHAVSLTAAMVTAPAFPES 437
>gi|443683607|gb|ELT87807.1| hypothetical protein CAPTEDRAFT_215538 [Capitella teleta]
Length = 2055
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 209/447 (46%), Gaps = 86/447 (19%)
Query: 406 DNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHE 465
D +VL I L ++ Q QY +K++ ++ L + LSL +L +W Q G+ ++ N+H
Sbjct: 3 DAHVLSIALEGNIDQMQYCDKVKNLVEHLGTK--LSLEELSKIWRMQNGESTVVIDNIHS 60
Query: 466 LLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLF 525
++A FS QLD LF Q SW A+ K +KLL LI ++ + K KVL L
Sbjct: 61 IIAACGVKFSTTQLDQLFKLIQMSWNIADDKMRDKLLSLIGKIGTNSKVTKTTSKVLELL 120
Query: 526 WSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALR 585
W LAH + T ++EQA++ HL IL+ S ++ K I++ C+++ + WV+PAL+
Sbjct: 121 WDLAHLPSLKTSLIEQAISEHLTILNDSYVL-KENVKRIYVVKCVDDIREG-VWVLPALK 178
Query: 586 QIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNL-----CSL 640
Q+ I +N+ H+ H + +SI+ L KN+ +I L+TN+L C++
Sbjct: 179 QLLQI------SKNIAKHS-----FHKA--EKSILQELNKNYEIIKLVTNSLTKFHHCAV 225
Query: 641 LQISSFN----------GKMNALNEVNKVIAGVAY-------YPHRH------------P 671
L N G+ + V+ ++ + + Y H H P
Sbjct: 226 LHAKESNEALSENTFVDGRYTHQDFVSVHLSFLQFLLQEGILYLHWHRARDLWDALIASP 285
Query: 672 EE---------EWLT-------PDRQ---------------LTESGLKCFEKFFKSVNIG 700
+ EW T PD Q LT G CF+ FF+SVN
Sbjct: 286 DACHWDKEMCYEWFTKGLADLEPDTQSQLFQKQLLHIDPTKLTVKGFNCFKSFFESVNQS 345
Query: 701 EGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGE-DIAFRAIDLLKEVST-HLGPKLQS 758
E K LK SL ++ DL G ++LW + NA + +I RA+DLL +++ +L + +
Sbjct: 346 EQK--LKKSGNSLSVEKTDLAGLDFLWEICLNASDAEITERAVDLLMDMTYFNLVSRFKR 403
Query: 759 SLTQFHKTFIAECLDRLRAHYDTIGLS 785
H+ FI EC RL +G S
Sbjct: 404 DPIVLHQKFIDECYSRLELAMIPLGGS 430
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 795 ARQIWTAL-AQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
AR +W AL A H D+E C++WF+K + DL+P F+K +LH +P
Sbjct: 274 ARDLWDALIASPDACHWDKEMCYEWFTKGLA---DLEPDTQSQLFQKQLLHIDP 324
>gi|148698873|gb|EDL30820.1| mCG121553, isoform CRA_b [Mus musculus]
Length = 427
Score = 157 bits (397), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 205/456 (44%), Gaps = 73/456 (16%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 40 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 92
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 93 LGKCLLASTYLARLGLSESDENCKRFMERCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 152
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 153 LLIELVAERMKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAIS 211
Query: 179 PIDYY-KNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ + K GW+VDL+N FG +GGF + + ++ + + + AL++P G EYL
Sbjct: 212 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNS 270
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 271 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 303
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q V ++ RL I+L
Sbjct: 304 -IPELL-------------------------SAIKLLCMR--FQPALVTTVDALRLDILL 335
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 336 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 392
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQA 453
+ Q QY ++++ I+ L LSL +L +W Q
Sbjct: 393 IDQAQYCDRIKGIIELL--GSKLSLDELTKIWKIQV 426
>gi|345311349|ref|XP_003429097.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like, partial
[Ornithorhynchus anatinus]
Length = 1261
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 214/477 (44%), Gaps = 109/477 (22%)
Query: 188 GWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPI 247
GWLVDL+N FG +GGF + + ++ +R Q E P +L P+
Sbjct: 133 GWLVDLVNRFGELGGFTAIQAKLHSEDIELGVSSMPWVR-LAQRAEPSCAPPMLD---PV 188
Query: 248 LEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLT 307
+ + + ++N+ ++++K + KLL+ +PE+L +
Sbjct: 189 IHKMIKYVQNVEEKDVKDK-----------------KLLS-----------IPELLSAI- 219
Query: 308 DEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNG 367
KLL R Q D V ++ RL I+LR+L+ F+
Sbjct: 220 ------------------------KLLCMRF--QPDLVTAVDDLRLDILLRMLKSPHFSA 253
Query: 368 KMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKL 427
KMN+L EV K+I + + DR+ W+ +N+VL + L ++ Q QY +++
Sbjct: 254 KMNSLKEVTKLIEDSTL---SKSVKIAIDADRLLDWLVENSVLSVALEGNIDQAQYCDRI 310
Query: 428 EKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQ 487
+ I+ L + LSL +L +W Q G+ +++N+H ++A A FS QL HLFV Q
Sbjct: 311 KGIIELLGSK--LSLDELTKIWRIQCGQSSTVIENIHTIVAAAAVKFSSDQLSHLFVLIQ 368
Query: 488 ASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHL 547
SW + + + +KLL LI R+ + + + KVL + W LAH + +++QAL HL
Sbjct: 369 KSWETESDRVRQKLLSLIGRIGREARFDTTSAKVLEVLWDLAHLPTLPGGLIQQALDEHL 428
Query: 548 KILDYSCSQERDKQKTIWLQTCIEEFK--------------------SNPK---WVVPAL 584
IL + + + +++ ++ CIE+ K NP WVVPAL
Sbjct: 429 AILSDAYTIKETVKRS-YIIKCIEDIKRPGEWTGLEKAKKDGFKVCPQNPPQLVWVVPAL 487
Query: 585 RQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLIMLITNNL 637
RQ+ +I +RS Q SII L KN ++ L+T +L
Sbjct: 488 RQLHEI-----------------TRSFVKQTYQKQDKSIIQDLKKNFEIVKLVTGSL 527
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGED-IAF 739
++T SG F+ FF++VN+ + +L K + LL++ +L+G +++W+V + +D IA
Sbjct: 635 EITMSGFGLFKAFFENVNLCDHRL--KRQGSQLLVEKLELVGMDFIWKVCMESPDDEIAN 692
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
A+ L+ S +L P+L+ HK FIA+C RL A +G T + A ++
Sbjct: 693 EAVQLIISYSYVNLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKM 751
Query: 799 WTALAQEAI 807
TA A +
Sbjct: 752 LTATAMPTV 760
>gi|405959512|gb|EKC25542.1| Ubiquitin carboxyl-terminal hydrolase 24 [Crassostrea gigas]
Length = 2338
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 198/433 (45%), Gaps = 72/433 (16%)
Query: 34 KFPVEKLAILDSKISSSRWVVPVLPEQEL-ECLIKAAIELCKTNSDVDSEPCQRFFREGL 92
+FPV L L+ ++ + W +P E+ L +CLI AA L + N + E C+RF +
Sbjct: 102 EFPVTNLYELEGRVFAEHWSIPYKKEESLGKCLI-AATRLAEANLTENDEHCRRFLERCM 160
Query: 93 SISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP----LLDILTMVFNP 148
SF K++T AVH W I I+N + +++ V +L P +L+ILT+VFN
Sbjct: 161 PESFQKLMTSGAVHRWNAEIQEGIFNMAELFIDMCVARLQH--LPIHHEILNILTLVFNK 218
Query: 149 CNKFHTFNSNQQSISVPVNSNIADDEIFARPIDYYK--NQRGWLVDLINLFGSMGGFQIL 206
++FH F + + + D +++ Y + GWL IN F GGF ++
Sbjct: 219 ESEFH-FKNRSKRDRTYWEDKLEDGQLYTANTGYKSSIDPYGWLTHAINRFAFKGGFNVV 277
Query: 207 LERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKE 266
+ +N+ L P + AL+RPFG E+L + + P +E + ++NL +++LK
Sbjct: 278 RKLLENEE-LDAPSMAALLRPFGMCAEFLNPKVVTEILAPGMEKTIKYIQNLEEKDLK-- 334
Query: 267 AKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISV 326
E K ++S ++ S KLL ++ P+ E+L D
Sbjct: 335 ---EKKIGSVSDLLASMKLLC--------IQMWPQHTESLDD------------------ 365
Query: 327 IIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYP 386
RL++ LR+L+ FN +MNAL EV K+I
Sbjct: 366 ------------------------LRLEVALRMLKSPHFNARMNALKEVTKLIEDATSNK 401
Query: 387 HRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLD 446
++ T + W+ +N VL I L ++ Q QY EK++ I+ FL E +++ +L
Sbjct: 402 VSKTAIDYKT---ILHWLVENKVLSIALEGNIDQVQYCEKVKGIVDFLGSE--ITIEELA 456
Query: 447 AVWAAQAGKHDAI 459
+W Q ++ +
Sbjct: 457 MIWKMQCHGNETL 469
>gi|344235614|gb|EGV91717.1| Ubiquitin carboxyl-terminal hydrolase 24 [Cricetulus griseus]
Length = 2077
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 236/503 (46%), Gaps = 42/503 (8%)
Query: 332 KLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPE 391
KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV K+I
Sbjct: 76 KLLCMRF--QPDLVTIVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSV 130
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
+ + DR+ W+ +N+VL I L ++ Q QY ++++ I+ L LSL +L +W
Sbjct: 131 KNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELL--GSKLSLDELTKIWKI 188
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
Q + +++N+H ++A A F+ QL+HLFV Q SW + + + +KLL LI R+ +
Sbjct: 189 QVRQSSTVIENIHTIIAAAAVKFNADQLNHLFVLIQKSWETESDRVRQKLLSLIGRIGRE 248
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
+ + KVL++ W LAH + + +++QAL HL IL + + ++ K ++ CIE
Sbjct: 249 ARFEATSGKVLDVLWELAHLPTLPSSLIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIE 307
Query: 572 EFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSN-NRQSIIDILIKNHSLI 630
+ K + ++ L++ +I L G L H ++ + +++D +
Sbjct: 308 DIK---RSIIQDLKKNFEIVKLV-TGSLLACHRLAAAVAGPGGLTGLTLVDGRYTYREYL 363
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNK--VIAGVAYYPHRHPEEEWLTPDRQLTESG-- 686
L LQ ++ N E+ + V R EW T + ES
Sbjct: 364 EAHLKFLAFFLQEATLYLGWNRAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQ 423
Query: 687 ----------LKCFE------KFFKS----VNIGEGKLVLKVKKRSLLLDNADLIGAEYL 726
L+ +E FK+ VN+ + +L K + L ++ +LIG +++
Sbjct: 424 QQLFKEKILKLESYEITMNGFNLFKTFFENVNLCDHRL--KRQGAQLYVEKLELIGMDFI 481
Query: 727 WRV-ITNAGEDIAFRAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGL 784
W++ + + E+IA AI L+ S +L P+L+ HK FIA+C RL +G
Sbjct: 482 WKIAMESPDEEIANEAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEVASSALG- 540
Query: 785 SHTYRPILPEARQIWTALAQEAI 807
T + A ++ TA A +
Sbjct: 541 GPTLTHAVTRATKMLTATAMPTV 563
>gi|148706202|gb|EDL38149.1| ubiquitin specific peptidase 9, Y chromosome [Mus musculus]
Length = 1929
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/86 (81%), Positives = 80/86 (93%)
Query: 438 KALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQ 497
KAL+L DL+ +WAAQAGKH+AIVKNVH+LLAKLAW+FSP QLDHLF CF+ASWT+A++KQ
Sbjct: 2 KALTLQDLNNIWAAQAGKHEAIVKNVHDLLAKLAWNFSPEQLDHLFDCFKASWTNASKKQ 61
Query: 498 TEKLLELIRRLAEDDKDGVMADKVLN 523
EKLLELIRRLAEDDKDGVMA KVLN
Sbjct: 62 REKLLELIRRLAEDDKDGVMAHKVLN 87
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKL+ +K++ ++D+ DLIG +YLW+V+ + +DI+ RA
Sbjct: 186 LTENGMKCFERFFKTVNCREGKLM--IKRKIYMMDDLDLIGLDYLWKVVIQSNDDISSRA 243
Query: 742 IDLLKEVSTHLGPKLQSSLTQF---HKTFIAECLDRLRAHYDTIGLSHT 787
IDLLKE+ T LGPKLQ++ F H +F ++ + D LSHT
Sbjct: 244 IDLLKEIYTSLGPKLQANQRAFRGKHLSFTVRFPNQGKEVEDLDILSHT 292
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
+A+QIW LA+ A++ DREACF W+SKLM DEPDL P + K+FFE +VL +P
Sbjct: 130 QAKQIWNCLAENAVYFSDREACFMWYSKLMGDEPDLHPDINKEFFESNVLQLDP 183
>gi|291226083|ref|XP_002733025.1| PREDICTED: Y-linked ubiquitin-specific protease 9-like
[Saccoglossus kowalevskii]
Length = 594
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 146/251 (58%), Gaps = 28/251 (11%)
Query: 60 QELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHN-CIYN 118
+L+ L+ LCK D SE + F + L F I A+ + + + I
Sbjct: 57 NDLDLLLITTTALCKKGMDEHSELIKVFTEKTLLKLFRHIHDTYAIINQDGVLKDETIIT 116
Query: 119 NCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSN-----------QQSISVPVN 167
++L++LI++KL D PLL++L ++F+PC++F+ +N + Q+S S PV
Sbjct: 117 RTEQLIDLIIIKLNDDYMPLLNLLAIIFDPCSRFYAYNESAEAKSLTTATCQRSASEPVV 176
Query: 168 SNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRP 227
I+D+ ++P +G+LVD+INLFG++GGFQ + ERFQ TIPV AL+RP
Sbjct: 177 YAISDES--SKP-------KGFLVDIINLFGNLGGFQSIKERFQRDPPPTIPVTAALLRP 227
Query: 228 FGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELK---KEAKN----ESKNDAISVII 280
FGQ +E+LT T++ YF+P+L+ E+L+ L+D EL+ E+++ E K DAI+ II
Sbjct: 228 FGQCYEFLTEDTVVAYFVPVLDKTCEMLDVLSDSELQLLLSESEDIVIGEDKPDAINTII 287
Query: 281 KSCKLLAARVP 291
+ + +A R+P
Sbjct: 288 VAVESIATRIP 298
>gi|393910512|gb|EFO24354.2| hypothetical protein LOAG_04131 [Loa loa]
Length = 2307
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 218/449 (48%), Gaps = 68/449 (15%)
Query: 400 MAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAI 459
+ +W++ +++E+++RD+LH P Y E+LE++ R L++ A+++ DLD +W Q +HD I
Sbjct: 4 LTEWLRKQHLIEVLVRDNLHHPSYCERLERVFRVLLERNAVTVDDLDILWNVQHERHDVI 63
Query: 460 VKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDK---DGV 516
+NVH+L+AKL + V HLF + SWT ++ +Q LL+LIRR+ D +
Sbjct: 64 QRNVHDLIAKLVNGLNNVLQKHLFERMKESWTKSSSRQRTLLLDLIRRIGVDFSSLTEKQ 123
Query: 517 MADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSN 576
+ K L+L W L H + + ++++ AL +H +L+ + E ++ +++ CI+E +
Sbjct: 124 LTIKSLSLLWDLFHDERLPVEMIDAALEAHFNVLESAVPAEELRRH--YIERCIDELLLD 181
Query: 577 PKWVVPALRQIKDIC-----CLYEPGQNLNSHAPLSS--------------------RSH 611
+V+PAL+ ++ + C Y G+ + +++ +
Sbjct: 182 SVFVLPALKHMQRLMTLMPECDYSTGRKVTRAEYIATVQQDTELCSRLSKNVALYMEKVR 241
Query: 612 SSNNRQSIIDILIKNHSLIMLI-----TNNLCSLLQISSF---NGKMNAL----NEV-NK 658
++ N Q + +++ S++M + ++NL L F +G++ + NE+ +
Sbjct: 242 NAMNDQPHVYTAVEDASVVMFVGRYTHSDNLRIRLGFLHFLLTDGQLWLMTPQANELWDA 301
Query: 659 VIAGVAYYPHR---------HPEEEWLTP---DRQLTESGLK------------CFEKFF 694
+IA + R ++E + P D+ T LK CF+ F+
Sbjct: 302 LIARSVFEYERTYGFQLFATMQDQEDIDPKALDQLFTSRILKLPVEMLNEEGFSCFKTFW 361
Query: 695 KSVNIGEGKLVLKVKKRS-LLLDNADLIGAEYLWRVITNAGEDIAFRAIDLLKEVSTHLG 753
++N KL + S L+ + DL G +YLW ++ A +++ AI L E+ +
Sbjct: 362 TAINKKHSKLFQPTEGMSHYLMCDFDLEGMDYLWEIMLQARGEVSHLAISLWVEILANPH 421
Query: 754 PKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
+ S +T + +C L+A +D +
Sbjct: 422 TAVISDFAHLIQTVVNKCFVMLKAKHDDL 450
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 791 ILPEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVL 843
+ P+A ++W AL ++F +R F+ F+ M D+ D+DPK + F +L
Sbjct: 291 MTPQANELWDALIARSVFEYERTYGFQLFAT-MQDQEDIDPKALDQLFTSRIL 342
>gi|312073875|ref|XP_003139716.1| hypothetical protein LOAG_04131 [Loa loa]
Length = 2333
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 218/449 (48%), Gaps = 68/449 (15%)
Query: 400 MAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAI 459
+ +W++ +++E+++RD+LH P Y E+LE++ R L++ A+++ DLD +W Q +HD I
Sbjct: 4 LTEWLRKQHLIEVLVRDNLHHPSYCERLERVFRVLLERNAVTVDDLDILWNVQHERHDVI 63
Query: 460 VKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDK---DGV 516
+NVH+L+AKL + V HLF + SWT ++ +Q LL+LIRR+ D +
Sbjct: 64 QRNVHDLIAKLVNGLNNVLQKHLFERMKESWTKSSSRQRTLLLDLIRRIGVDFSSLTEKQ 123
Query: 517 MADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSN 576
+ K L+L W L H + + ++++ AL +H +L+ + E ++ +++ CI+E +
Sbjct: 124 LTIKSLSLLWDLFHDERLPVEMIDAALEAHFNVLESAVPAEELRRH--YIERCIDELLLD 181
Query: 577 PKWVVPALRQIKDIC-----CLYEPGQNLNSHAPLSS--------------------RSH 611
+V+PAL+ ++ + C Y G+ + +++ +
Sbjct: 182 SVFVLPALKHMQRLMTLMPECDYSTGRKVTRAEYIATVQQDTELCSRLSKNVALYMEKVR 241
Query: 612 SSNNRQSIIDILIKNHSLIMLI-----TNNLCSLLQISSF---NGKMNAL----NEV-NK 658
++ N Q + +++ S++M + ++NL L F +G++ + NE+ +
Sbjct: 242 NAMNDQPHVYTAVEDASVVMFVGRYTHSDNLRIRLGFLHFLLTDGQLWLMTPQANELWDA 301
Query: 659 VIAGVAYYPHR---------HPEEEWLTP---DRQLTESGLK------------CFEKFF 694
+IA + R ++E + P D+ T LK CF+ F+
Sbjct: 302 LIARSVFEYERTYGFQLFATMQDQEDIDPKALDQLFTSRILKLPVEMLNEEGFSCFKTFW 361
Query: 695 KSVNIGEGKLVLKVKKRS-LLLDNADLIGAEYLWRVITNAGEDIAFRAIDLLKEVSTHLG 753
++N KL + S L+ + DL G +YLW ++ A +++ AI L E+ +
Sbjct: 362 TAINKKHSKLFQPTEGMSHYLMCDFDLEGMDYLWEIMLQARGEVSHLAISLWVEILANPH 421
Query: 754 PKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
+ S +T + +C L+A +D +
Sbjct: 422 TAVISDFAHLIQTVVNKCFVMLKAKHDDL 450
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 791 ILPEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVL 843
+ P+A ++W AL ++F +R F+ F+ M D+ D+DPK + F +L
Sbjct: 291 MTPQANELWDALIARSVFEYERTYGFQLFAT-MQDQEDIDPKALDQLFTSRIL 342
>gi|321458290|gb|EFX69360.1| hypothetical protein DAPPUDRAFT_329113 [Daphnia pulex]
Length = 2727
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 225/495 (45%), Gaps = 70/495 (14%)
Query: 343 DTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAK 402
D ++ RL++ILR+L+ F+ +MNAL EV+K++ P++ + D++A+
Sbjct: 340 DLADRMNNIRLEVILRMLKTPHFSTRMNALKEVSKLVEEAE---STSPKKSSIPGDQLAE 396
Query: 403 WIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKN 462
W+ D+ VL + L ++ QY ++++ ++ FL LS +L +W A K +V N
Sbjct: 397 WLSDHQVLSVALEGNIDHVQYTDRIKGLVEFLGPR--LSSDELSQIW-AMGEKSFHVVDN 453
Query: 463 VHELLAKLAWDFSPVQLDHLFVCFQASWT-SANRKQTEKLLELIRRLAEDDKDGVMADKV 521
+H +LA A +P QLDHL + Q W ++N + EKLL + +L ++ + K+
Sbjct: 454 LHGVLAAAAPKLAPAQLDHLLLLVQEKWQRNSNDRMREKLLSFLGQLGKECRVSKTGSKI 513
Query: 522 LNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVV 581
L W LA + ++E+AL HL +L ++E+ ++ ++ CI++ K + +
Sbjct: 514 LETLWDLARYTGLPCHLVERALDEHLSVLAEIPNKEQLRK--TYVLRCIDDLKKGNQGTL 571
Query: 582 PALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILI----KNHSLIM----LI 633
P LR + ++ G H P + N I+ +L+ K HS + ++
Sbjct: 572 PLLRHLLNVARSMVKGSG-TYHKPDKTALAEWNTNHEIVKLLLVSLGKCHSQAVASAKVL 630
Query: 634 TNNLCSLLQISSFNGKMNALNEVNKVIAGVA------YYPHRHPEEEW------------ 675
+ +L + + + L + + + + Y P +E W
Sbjct: 631 SQSLTQETIVDRYGYRHGQLIQAHLDLLQLLLKEADLYLPWARCKELWDTLVTNPDACEA 690
Query: 676 ---------------LTPDRQ---------------LTESGLKCFEKFFKSVNIGEGKLV 705
+ PD Q LT G +C + FF+SVN+ +GK
Sbjct: 691 DRECCFQWFASCLGDMQPDTQSALFREKILKSNPAQLTLRGFECVQTFFESVNVSDGK-- 748
Query: 706 LKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAFRAIDLLKEVST-HLGPKLQSSLTQF 763
++ +++ D IG +Y W+V + + ED+A A+ + ++S HL P+++
Sbjct: 749 MRRFGTQAMVEKLDPIGTDYFWQVALESPNEDLAKEAMGHILDISYLHLAPRMKKDPATL 808
Query: 764 HKTFIAECLDRLRAH 778
HK FI +C RL
Sbjct: 809 HKKFINDCYKRLETQ 823
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 122/260 (46%), Gaps = 8/260 (3%)
Query: 12 KDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIE 71
K+++ S E S FP L L+S++ + +W +P ++ L + AA +
Sbjct: 62 KEVAGVSKGSSEDASVSESGNDGFPETHLYELESRVFTDQWSIPYKKDESLHKCLAAATK 121
Query: 72 LCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKL 131
L + + E QRF + + +F K+L AV W I IYN + ++L+V+++
Sbjct: 122 LIEEGVWENDENMQRFLNKCMPEAFRKLLNSGAVQRWNSEIQKGIYNMLELFIDLLVVRM 181
Query: 132 GQDVFPLLDILTMVFN-PCN---KFHTFNSNQQSISVPVNSNIADDEIFAR-PIDYYKNQ 186
P + +L VF+ C+ +++ N QQS EIFAR P ++ ++
Sbjct: 182 KHKPVP-VQMLNQVFSLACDLDCEWNCKNKGQQSEEKHWEDLFGPGEIFARSPENFNQDP 240
Query: 187 RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMP 246
GWLVDL+N FG+ GF ++ + F+ L + A++RP G E L +
Sbjct: 241 YGWLVDLLNHFGAKNGFGMMQDSFEED--LDPVSMAAILRPLGNCAELLNPSAVCPMLTK 298
Query: 247 ILEIVPEILENLTDEELKKE 266
+E + + D++LK +
Sbjct: 299 CVEYAVNHVTTIEDKDLKNK 318
>gi|444727496|gb|ELW67984.1| Ubiquitin carboxyl-terminal hydrolase 24, partial [Tupaia
chinensis]
Length = 2280
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 132/520 (25%), Positives = 234/520 (45%), Gaps = 85/520 (16%)
Query: 332 KLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNE-----VNKVIA------ 380
KLL R Q D V ++ RL I+LR+L+ F+ KMN+L E V +++A
Sbjct: 152 KLLCMRF--QPDLVTIVDDLRLDILLRMLKSPHFSAKMNSLKEGGICHVAEIVAMANCQV 209
Query: 381 -------------------------GVAYYPHRHPE-----------EEWLTPDRMAKWI 404
G A R + + + DR+ W+
Sbjct: 210 SDAKFAVTAEGLTHGLFLSSSIVFGGCALIGVRVTKLIEDSTLSKSVKNAIDTDRLLDWL 269
Query: 405 KDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVH 464
+N+VL I L ++ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H
Sbjct: 270 VENSVLSIALEGNIDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIH 327
Query: 465 ELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNL 524
++A A F+ QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++
Sbjct: 328 TIIAAAAVKFNSDQLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDV 387
Query: 525 FWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPAL 584
W LAH + + +++QAL HL IL + + ++ K ++ CIE+ K + ++ L
Sbjct: 388 LWELAHLPTLPSSLIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRS---IIQDL 443
Query: 585 RQIKDICCLYEPGQNLNSHAPLSSRSHSSN-NRQSIIDILIKNHSLIMLITNNLCSLLQI 643
++ +I L G + H ++ + +++D + L LQ
Sbjct: 444 KKNFEIVKLV-TGSLIACHRLAAAVAGPGGLTGSTLVDGRYTYREYLEAHLKFLAFFLQE 502
Query: 644 SSFNGKMNALNEVNK--VIAGVAYYPHRHPEEEWLTPDRQLTESG------------LKC 689
++ N E+ + V R EW T + ES L+
Sbjct: 503 ATLYLGWNRAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLES 562
Query: 690 FE------KFFKS----VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIA 738
+E FK+ VN+ + +L K + L ++ +LIG +++W++ + + E+IA
Sbjct: 563 YEITMNGFNLFKTFFENVNLCDHRL--KRQGAQLYVEKLELIGMDFIWKIAMESPDEEIA 620
Query: 739 FRAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRA 777
AI L+ S +L P+L+ HK FIA+C RL +
Sbjct: 621 NEAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLES 660
>gi|355558046|gb|EHH14826.1| hypothetical protein EGK_00811, partial [Macaca mulatta]
Length = 346
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 160/357 (44%), Gaps = 62/357 (17%)
Query: 24 GTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEP 83
G G G +FP L L+S++ + W +P E+ L + A+ L + E
Sbjct: 38 GNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLARLGLSESDEN 95
Query: 84 CQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLDI 141
C+RF + +F K+LT AVH W IH IYN L+EL+ ++ QD P LL +
Sbjct: 96 CKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPIGLLGV 155
Query: 142 LTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWLVDLINLFGS 199
LTM FNP N++H F + + + +FA P+ ++ + GW+VDL+N FG
Sbjct: 156 LTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVSPVSTFQKEPHGWVVDLVNKFGE 214
Query: 200 MGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLT 259
+GGF + + ++ + + + ALI+P G EYL + P+L+ P IL +
Sbjct: 215 LGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNSSVV----QPMLD--PVILTTIQ 267
Query: 260 DEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNES 319
D +E + K +S +PE+L
Sbjct: 268 DVRSVEEKDLKDKKRLVS---------------------IPELL---------------- 290
Query: 320 KNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVN 376
+ KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV+
Sbjct: 291 ---------SAIKLLCMRF--QPDLVTIVDDLRLDILLRMLKSPHFSAKMNSLKEVS 336
>gi|355745318|gb|EHH49943.1| hypothetical protein EGM_00689, partial [Macaca fascicularis]
Length = 346
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 160/357 (44%), Gaps = 62/357 (17%)
Query: 24 GTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEP 83
G G G +FP L L+S++ + W +P E+ L + A+ L + E
Sbjct: 38 GNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREESLGKCLLASTYLARLGLSESDEN 95
Query: 84 CQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLDI 141
C+RF + +F K+LT AVH W IH IYN L+EL+ ++ QD P LL +
Sbjct: 96 CKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLIELVAERIKQDPIPIGLLGV 155
Query: 142 LTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-RPIDYYKNQ-RGWLVDLINLFGS 199
LTM FNP N++H F + + + +FA P+ ++ + GW+VDL+N FG
Sbjct: 156 LTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVSPVSAFQKEPHGWVVDLVNKFGE 214
Query: 200 MGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLT 259
+GGF + + ++ + + + ALI+P G EYL + P+L+ P IL +
Sbjct: 215 LGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNSSVV----QPMLD--PVILTTIQ 267
Query: 260 DEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNES 319
D +E + K +S +PE+L
Sbjct: 268 DVRSVEEKDLKDKKRLVS---------------------IPELL---------------- 290
Query: 320 KNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVN 376
+ KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV+
Sbjct: 291 ---------SAIKLLCMRF--QPDLVTIVDDLRLDILLRMLKSPHFSAKMNSLKEVS 336
>gi|26337023|dbj|BAC32195.1| unnamed protein product [Mus musculus]
Length = 418
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 169/379 (44%), Gaps = 68/379 (17%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 94 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 146
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 147 LGKCLLASTYLARLGLSESDENCKRFMERCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 206
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 207 LLIELVAERMKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAIS 265
Query: 179 PIDYY-KNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ + K GW+VDL+N FG +GGF + + ++ + + + AL++P G EYL
Sbjct: 266 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNS 324
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 325 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 357
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q V ++ RL I+L
Sbjct: 358 -IPELL-------------------------SAIKLLCMRF--QPALVTTVDALRLDILL 389
Query: 358 RLLQISSFNGKMNALNEVN 376
R+L+ F+ KMN+L EV+
Sbjct: 390 RMLKSPHFSAKMNSLKEVS 408
>gi|303271175|ref|XP_003054949.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462923|gb|EEH60201.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 2789
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 139/569 (24%), Positives = 246/569 (43%), Gaps = 92/569 (16%)
Query: 25 TSCGPGCTCKFPVEK-LAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEP 83
+ C P CT +P E+ L +L+ W V P Q C+ AA+ + + S
Sbjct: 16 SECDPACT--YPAEEHLLVLEGLRRLPSWTV--YPAQLSNCM-SAALRASEDGVEETSSE 70
Query: 84 CQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILT 143
++ +RE + +F K ++ +++W N+H I KL EL+ +KL
Sbjct: 71 MRQLYRELIPGTFEKCMSGADLYNWNDNVHGNILECGVKLGELVAVKLA----------- 119
Query: 144 MVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLV-----DLINLFG 198
+ +N++S ++ A F R D+YK R + + + F
Sbjct: 120 ---------NVHAANEESEEDLLHLLQALPLAFDRRADFYKKHRHDEIPREHPGVADAFA 170
Query: 199 SMGGFQIL--LERFQNKSTLTIPVIFALIRPF--------------------------GQ 230
++GG ++ L+R + F P G+
Sbjct: 171 AVGGSRLFAALQRAAPRKMNARAGTFDDDAPIRIDQDDEEEEDEDEDDAMHQGTPDEGGE 230
Query: 231 V-HEYLTLPTILKYF--MPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKL-- 285
+ H +L L ++ +F + V E+L + T L+ DA+ + C +
Sbjct: 231 IIHRWLCL--VIDHFGNAGGFDAVLEMLHDPTRVTLRT-------FDAVMTAMARCAIVL 281
Query: 286 ---LAARVPHQEDTEIVPEILENLT---DEELKKEAKNESKNDAI---SVIIKSCKLLAA 336
L AR +E+ ++ + L+++ D L + +E + S + K+L+A
Sbjct: 282 DDQLLARF--EENAQVALDHLQDIVTRGDSSLVGSSPSERDRRYLHLGSALRSLRKVLSA 339
Query: 337 RV--PHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEW 394
V P E V ++E ++ +L IS+FN ++ AL E+N ++A + EE
Sbjct: 340 CVGDPEAEKRVSRVE---RAMVEGMLSISTFNMQLIALREINLMLATASNSKLLGTEESA 396
Query: 395 LTPDRMAKWIKDNNVLEIVLRD-SLHQPQYVEKLEKILRFLIKEKALSLGDLDAVW--AA 451
KW+ VL VLR LH QYV+++ +LRFL+KE AL+ +D +W
Sbjct: 397 SAMQTAVKWLDMKKVLPHVLRPVYLHHKQYVDQVAAVLRFLLKEDALAETHVDMLWDITQ 456
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
+ + + NV++LL LAW F+ QLD LF+ F+++ + KL E+I++LA
Sbjct: 457 KQDTFEEVKHNVYDLLTSLAWHFNGDQLDQLFLRFESAGGGMTAADSGKLSEMIQKLARG 516
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIME 540
D G MA+++L L W + H+ + +E
Sbjct: 517 DNGGQMAERLLALLWRMVHAGETGAAGLE 545
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 28/127 (22%)
Query: 678 PDRQLTESGLKCFEKFFKSVNIGEGKLVL------------------KVKKRSLLLD--- 716
P ++T+SG F FF + GKLV +R L+ D
Sbjct: 765 PAEKMTKSGWSTFRTFFMQAGLDSGKLVFPEDDSEAPELVFLNEDGDDGSRRVLVTDHRA 824
Query: 717 ------NADLIGAEYLWRVITNAGED-IAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIA 769
+ DL+G + LWR+ + +D +A A++LL ++ T L ++ +T H+ F+A
Sbjct: 825 EEISARDIDLVGLDQLWRISLDTSDDAVADDALNLLIQLHTDLAVNDENYVTNLHRDFLA 884
Query: 770 ECLDRLR 776
LDRLR
Sbjct: 885 STLDRLR 891
>gi|296470431|tpg|DAA12546.1| TPA: Y-linked ubiquitin-specific protease 9-like [Bos taurus]
Length = 478
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 138 LTENGMKCFERFFKAVNCREGKLV--TKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 195
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 196 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 236
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPI 848
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + K+FFE +VL +P
Sbjct: 81 PQAKQIWKCLAENAVYVCDREACFKWYSKLMGDEPDLDPDINKEFFESNVLQLDPF 136
>gi|119931091|ref|XP_001256846.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase FAF-X,
partial [Bos taurus]
Length = 347
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 70 LTENGMKCFERFFKAVNCREGKLV--TKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 127
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 128 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 168
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 45/56 (80%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPI 848
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + K+FFE +VL +P
Sbjct: 13 PQAKQIWKCLAENAVYVCDREACFKWYSKLMGDEPDLDPDINKEFFESNVLQLDPF 68
>gi|350595636|ref|XP_003135083.3| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like, partial [Sus scrofa]
Length = 1842
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 20 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 77
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 78 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 118
>gi|402909910|ref|XP_003917644.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like, partial [Papio anubis]
Length = 1936
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 99 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 156
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 157 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 197
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 42 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 96
>gi|149035799|gb|EDL90480.1| rCG63187 [Rattus norvegicus]
Length = 298
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 131/267 (49%), Gaps = 13/267 (4%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 39 PPP-----AYHEVVDAEKNDENGNCSGEGV--EFPTTNLYELESRVLTDHWSIPYKREES 91
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 92 LGKCLLASTYLARLGLSESDENCKRFMERCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 151
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 152 LLIELVAERMKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVS 210
Query: 179 PIDYY-KNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ + K GW+VDL+N FG +GGF + + ++ + + + AL++P G EYL
Sbjct: 211 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNS 269
Query: 238 PTILKYFMPILEIVPEILENLTDEELK 264
+ P++ + + ++ +++LK
Sbjct: 270 SVVQPMLDPVILTTIQDVRSVEEKDLK 296
>gi|444509272|gb|ELV09214.1| putative ubiquitin carboxyl-terminal hydrolase FAF-Y [Tupaia
chinensis]
Length = 1134
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ +DIA RA
Sbjct: 28 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQGNDDIACRA 85
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+ YDT+
Sbjct: 86 IDLLKEIYTNLGPRLQVNQVVIHEDFIHSCFDRLKTSYDTL 126
>gi|380803769|gb|AFE73760.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform 4,
partial [Macaca mulatta]
Length = 69
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/69 (84%), Positives = 65/69 (94%)
Query: 445 LDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLEL 504
LD +WAAQAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLEL
Sbjct: 1 LDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPGQLDHLFDCFKASWTNASKKQREKLLEL 60
Query: 505 IRRLAEDDK 513
IRRLAEDDK
Sbjct: 61 IRRLAEDDK 69
>gi|391339273|ref|XP_003743976.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Metaseiulus
occidentalis]
Length = 2518
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 143/664 (21%), Positives = 271/664 (40%), Gaps = 106/664 (15%)
Query: 3 PPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQEL 62
PP+ + D S S+S + + P +FP L L +++ W +P ++ L
Sbjct: 47 PPRCFPEINYDFS-STSQQITASPMEPIDPLEFPASFLQDLQNRVFVQDWSIPYKEDEAL 105
Query: 63 ECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQK 122
++A I L + + E C++F + F K+ V SW ++ + +
Sbjct: 106 ARCMQATIRLVEAGTAETDEGCKQFVDHVMPECFRKLCASFPVSSWAQDVQEGVKHMALI 165
Query: 123 LLELIV--LKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFARPI 180
+++ L+ GQ +L IL++VF+P +FH N N + S++ D F
Sbjct: 166 FIDVCCAYLRSGQAPESVLSILSIVFDPDCEFHVRNRN---VRYEEPSDVTDSFEF---- 218
Query: 181 DYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTI 240
GWL +L+N F + GF + F + + PV+ ++++P + + L +
Sbjct: 219 -------GWLQELLNKFSAQWGFDSMQSLFLQED-VAGPVMASMLQPLSKPAQLYKLEPM 270
Query: 241 LKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVP 300
+ F P ++ K+ K +
Sbjct: 271 KQVFDPCIQ-------------------------------KALKFV-------------- 285
Query: 301 EILENLTDEELKKEAKNESK-NDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRL 359
LTD +LK KN S D ++ + + C L + D ++ +++ILRL
Sbjct: 286 ---NGLTDADLK--VKNISYLPDLVNALRQICAFLWS------DQLQDFTQVAMQVILRL 334
Query: 360 LQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLH 419
L+ F + E+ ++I A + D + W+ +N+VL +VL +++
Sbjct: 335 LRSPHFAARTCGFKEIIQLIEESASTKQTRVS---IPRDFLVTWLTENSVLHLVLENNIE 391
Query: 420 QPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQL 479
Q Y +KL+ ++ + L+ D++ +WA Q ++ NVH +A A F+ L
Sbjct: 392 QSHYNDKLKAVIECV--ASTLTEEDVERIWAMQDRQNCTTADNVHYCVAAAACHFNENLL 449
Query: 480 DHLFVCFQASWT-SANRKQTEKLLELIRRLAEDDKDGVMADK--------VLNLFWSLAH 530
L + SW + + + ++L+ + ++ +D ++A+ L+L W L
Sbjct: 450 RKLLSLVETSWNENCSEEAKKRLMTFLGKMGKD----LIAENCRVENSLLTLDLIWKLVK 505
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
+ + ++E +L L IL S + K K + CI + S V+P+LR +K I
Sbjct: 506 TPQLSRHLVEHSLEQLLNILAALNSNHKGKAKKKFADACISDISSG-SLVLPSLRFLKWI 564
Query: 591 CCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNL--CSLLQISSFNG 648
C G + +AP +S ++ +D L+ L T +L C + FN
Sbjct: 565 LC----GTSTTRNAP------NSKQDKNFLDEFKATAKLVSLATKSLSECHTRSVEQFNA 614
Query: 649 KMNA 652
A
Sbjct: 615 SRRA 618
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWR-VITNAGEDIAFR 740
++ CF+ FF++VN L + + ++ A LIGA+YLW+ V+ N +DIA
Sbjct: 737 MSHKAFMCFKAFFEAVNRDAKNL--RKNREQFTVEKASLIGADYLWQLVLNNETDDIAEL 794
Query: 741 AIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDT 781
+ID + ++ L P L+ + H F +C RLR D+
Sbjct: 795 SIDFILDICYRQLSPTLKKDPIKLHTQFAQQCYVRLRQVADS 836
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 792 LPEARQIWTALAQEAIFHC--DREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
L EA QIW L++E C D+E CF++F K M DLD + FE+ ++ EP
Sbjct: 680 LQEAIQIWKTLSRENPNSCIADQEMCFEFFEKCMM---DLDEETRLKLFEQKLMQIEP 734
>gi|241618036|ref|XP_002408283.1| conserved hypothetical protein [Ixodes scapularis]
gi|215502950|gb|EEC12444.1| conserved hypothetical protein [Ixodes scapularis]
Length = 343
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 149/297 (50%), Gaps = 40/297 (13%)
Query: 303 LENLTDEELKKEAKNESKN-DAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQ 361
++ LTDE+LK +KN +++ ++K+ K+L + QE + L +ILR+L+
Sbjct: 60 IKGLTDEDLK------NKNIGSVTELLKAVKMLCVYLWPQE--IATTSSLCLDVILRMLR 111
Query: 362 ISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQP 421
S FN +MN L E+ K+I G + + + + +++ W+ +NNVL I L ++ Q
Sbjct: 112 CSHFNARMNGLKELVKLIEGCS---SSNSSKATIQSEQLLDWLAENNVLSITLESNIDQA 168
Query: 422 QYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDH 481
QY+EK++ I+ F+ LSL +L +WA Q ++ +V N+H ++A + F+ Q +H
Sbjct: 169 QYMEKIKGIIEFI--GPRLSLEELTKIWAMQDRQNCQVVDNIHGIMAAASTKFTQQQFEH 226
Query: 482 LFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKV-------------------- 521
L +W S + ++LL I +L ++ G ++ KV
Sbjct: 227 LIALISKAWRSGSDITWKRLLTFIGKLGKESNQGKVSTKVSIIFSLTSLTFFFCLTSLRL 286
Query: 522 ----LNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK 574
L+L W L+HS + +EQA+ IL S RD+ + ++ CI++ K
Sbjct: 287 RAQLLDLLWELSHSSTLPKTHVEQAVEEFFNIL--SEMSNRDQVRKQYISRCIDDVK 341
>gi|427797999|gb|JAA64451.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 499
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 183/395 (46%), Gaps = 78/395 (19%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQEL-ECLIKAAIEL-----CKTNSDVDSEPCQRFF 88
FP L L+ ++ +W +P ++ L +CLI AA L C++NSD C+ F
Sbjct: 117 FPQANLYELEQRVFVDQWSIPYKKDESLAKCLI-AATNLAKEGQCESNSD-----CRNFM 170
Query: 89 REGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP---LLDILTMV 145
+ F K+LT AV +W+ ++ +YN L++L V +LG + P L ++LTM
Sbjct: 171 ESCMPECFRKLLTALAVRNWQPDVQEGVYNMLMLLIDLTVERLGYNPVPEKLLSNVLTMA 230
Query: 146 FNPCNKFHTFNSNQQSISVPVNSNIADDEIFAR---PIDYYKNQRGWLVDLINLFGSMGG 202
F+P +FH N ++QS + + ++A+ +D Y GWL+D+IN FGS GG
Sbjct: 231 FDPEAEFHIKNKSRQST---LEQGLV---VYAKSRGSLDPY----GWLLDVINKFGSRGG 280
Query: 203 FQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEE 262
F +L +F LT + AL+ P ++L T P + ++ LTD++
Sbjct: 281 FDKILAKF--GENLTANEMAALLNPLAVCAQFLNPDTTCSLLSPCMNKAISYIKGLTDDD 338
Query: 263 LKKEAKNESKN-DAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEEL---------- 311
LK +KN +++ ++K+ K+L + QE ENLT E+
Sbjct: 339 LK------NKNIGSVTELLKAVKMLCVYLWPQEIASTX--FGENLTANEMAALLNPLAVC 390
Query: 312 ------------------------KKEAKNESKN---DAISVIIKSCKLLAARVPHQEDT 344
K ++ KN +++ ++K+ K+L + QE
Sbjct: 391 AQFLNPDTTCSLLSPCMNKAISYIKGLTDDDLKNKNIGSVTELLKAVKMLCVYLWPQE-- 448
Query: 345 VKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVI 379
+ L +ILR+L+ S FN +MN L E+ K+I
Sbjct: 449 IASTSTLCLDVILRMLKCSHFNARMNGLKELIKLI 483
>gi|384251519|gb|EIE24996.1| hypothetical protein COCSUDRAFT_46553 [Coccomyxa subellipsoidea
C-169]
Length = 2582
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/538 (21%), Positives = 217/538 (40%), Gaps = 89/538 (16%)
Query: 76 NSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLG--- 132
+ + ++ ++ R+ +F K + AV +W + I+N +++L LKL
Sbjct: 42 SGNAETHNIKKLMRDTAPYAFEKCFGERAVANWSDTVQQDIFNAAMHMVDLTALKLKALV 101
Query: 133 -------------QDVFPLLDILTMVFNPCNKFHTFNSNQ---------QSISVPVNSNI 170
+D+ LL+ L+ + +P FH N NQ + ++P+ S
Sbjct: 102 RYAGLPETCAELEEDLTGLLEALSRILDPATHFHQHNKNQDPGGVRGLQEGFALPLRSPA 161
Query: 171 -----ADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALI 225
AD E D Q WL L+N F GF + + +T + ++ ++
Sbjct: 162 VSLVDADPEALEAAEDMMGEQFCWLAALLNWFAEKHGFDAVC-KLCELATCSFSLLKMVL 220
Query: 226 RPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKL 285
P + ++L+ A + + + C
Sbjct: 221 DPLIKAIQFLS------------------------------------PRARTALAEPCGA 244
Query: 286 LAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTV 345
L R + ++ V E L+D + S I+ +C L R V
Sbjct: 245 LLDRHINGRLSDGV----EALSDSGRDRMFNGVSALFGQIHIVLACPLSPVRADEMVSAV 300
Query: 346 KQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMA-KWI 404
++ + RLL+ S FN + A+ E+N ++ P E P + A W+
Sbjct: 301 QR------AFVERLLEHSVFNKHLTAVREINNMLQRAKDVRSVCPGPEGQKPMKDAVGWL 354
Query: 405 KDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVW--AAQAGKHDAIVKN 462
+++++LR LHQ QYV++++K+L+ L E L L+ +W + +A+ N
Sbjct: 355 VQKGMVQVLLRAHLHQRQYVDQVQKVLKTLATEDGLRADHLELLWNLTEKVDTFEAVKTN 414
Query: 463 VHELLAKLAWDFSPVQLDHLFVCFQA--SWTSANRKQTEKLLELIRRLAEDDKDGVMADK 520
V+ +L LA D +LD LF F+A W + + T K ++L+++LA+ D G +A +
Sbjct: 415 VYSVLGDLAKDLHGPELDLLFSKFEACTGWPAPD---TLKAMDLLKQLAKSDAKGTLAQR 471
Query: 521 VLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIW--LQTCIEEFKSN 576
VL L W L + ++ + + S L + S + +W ++ CI + K +
Sbjct: 472 VLGLLWGLTFAPGAPAEVAQSRVLS--DSLHHYASVDEVGTPLVWDYMRRCISQIKRD 527
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 51/135 (37%), Gaps = 20/135 (14%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKL----------VL--KVKKRSLLLDNADLIGAEYLWRV 729
+ +CFE F + V EGKL VL + + LL + DL G YLW V
Sbjct: 689 IAHKAFECFEWFLQKVAFEEGKLQNERVEESSPVLPGNIIRTVLLSRDLDLKGLPYLWSV 748
Query: 730 ITNAGED-IAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTY 788
+ + IA RA LL + L L + + CLDRL A +
Sbjct: 749 VLDGPPHLIADRARTLLVNMHVRLADNLVPKQAEVRLGLLRSCLDRLLAAAHAL------ 802
Query: 789 RPILPEARQIWTALA 803
LPE W A
Sbjct: 803 -TGLPEGLSDWGAFG 816
>gi|255080844|ref|XP_002503995.1| predicted protein [Micromonas sp. RCC299]
gi|226519262|gb|ACO65253.1| predicted protein [Micromonas sp. RCC299]
Length = 2921
Score = 113 bits (282), Expect = 6e-22, Method: Composition-based stats.
Identities = 72/245 (29%), Positives = 127/245 (51%), Gaps = 12/245 (4%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+I +L++ +FN ++ AL E+ + + A H +E L + W++ VL +L
Sbjct: 453 MIEAMLKVPTFNMQLEALREIKRSLQEAAKTRDNHESKEQLKG--IVAWMEAKKVLPHIL 510
Query: 415 RDS-LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWA--AQAGKHDAIVKNVHELLAKLA 471
R + LH QYV+++ +LRFL++E A++ +D +WA + + + NV +LLA LA
Sbjct: 511 RPTYLHHKQYVDQVAAVLRFLLEEDAMTKAHIDELWAITQKQDTFEEVKNNVLDLLASLA 570
Query: 472 WDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHS 531
W FS QLD+LF F+ + A K+LE +++LA D GVMA+++L L W + H
Sbjct: 571 WKFSDEQLDYLFTLFEGAGHDA-LADCGKILETVQKLAGSDGKGVMAERLLELLWRMTHD 629
Query: 532 DDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDIC 591
+ +A+ ++L + ER K+ W+ + + + + +LR + I
Sbjct: 630 AG-----GAEMVAAFTRVLGHYDRMER-ASKSQWMARVVGDIRERRADLAVSLRLVIKIV 683
Query: 592 CLYEP 596
L P
Sbjct: 684 QLESP 688
>gi|47219294|emb|CAG10923.1| unnamed protein product [Tetraodon nigroviridis]
Length = 403
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 149/301 (49%), Gaps = 45/301 (14%)
Query: 303 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQI 362
++NL +++LK + + +I ++ + KLL R Q D V ++ RL +LR+L+
Sbjct: 59 VQNLEEKDLK-----DKRLVSIPDLLSAIKLLCMRF--QRDLVTVVDDLRLDTLLRMLKT 111
Query: 363 SSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQ 422
F+ KMN+L EV K+I + + D++ W+ +N+VL I L ++ Q Q
Sbjct: 112 PHFSTKMNSLKEVTKLIEESTV---SKTVKNAIDTDKLLDWLVENSVLSIALEGNIDQAQ 168
Query: 423 YVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHL 482
Y E+++ I+ L LSL +L +W QAG+ +++N+H ++A A FS QL HL
Sbjct: 169 YCERIKGIIELL--GSKLSLDELSKIWRIQAGQSSTVIENIHTIIAAAAVKFSFDQLTHL 226
Query: 483 FVCFQASWTSANRKQTEKLLELIRRLAEDDKD---------------------------- 514
FV Q SW + + +KLL LI R+ + +
Sbjct: 227 FVLIQKSWEVESDRVRQKLLSLIGRIGREARSETTTGKVSHILQGCNMKPAVCLVSLVVF 286
Query: 515 GV-MADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEF 573
GV ++ +VL + W LA + ++QAL HL IL + + + +++ ++ CIE+
Sbjct: 287 GVCLSVQVLEVLWELASH---LLPHVQQALEEHLGILSDAYAVKETVKRS-YIIKCIEDI 342
Query: 574 K 574
K
Sbjct: 343 K 343
>gi|312105216|ref|XP_003150491.1| hypothetical protein LOAG_14950 [Loa loa]
gi|307754344|gb|EFO13578.1| hypothetical protein LOAG_14950, partial [Loa loa]
Length = 282
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 160/334 (47%), Gaps = 65/334 (19%)
Query: 140 DILTMVFNPCNKFH--TFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLF 197
D L M F+P H + ++ ++ P FA+ +++ + + WL+ L++ F
Sbjct: 9 DFLQMEFDPNELMHYTSISAIEEVYQAP----------FAKRLEFQRVLQLWLLLLLSYF 58
Query: 198 GSMGGFQILLERFQNKS---TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEI 254
G +GGF IL++ F K+ T I +RPF L I + F P +++
Sbjct: 59 GKIGGF-ILMKNFLEKNINETTKITDFIDWLRPFASCSLLLKPAVITETFGPTIQVA--- 114
Query: 255 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKE 314
R+ H +D E+ E + K
Sbjct: 115 --------------------------------VTRLEHMDDKELKCETV---------KG 133
Query: 315 AKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNE 374
NES ++ +++S L+ + H +Q++ F L+ ILR+LQ++ F G++ AL E
Sbjct: 134 DLNESPYVELAKVLQSLSLVNPEMIH---LGRQMQFFALRYILRVLQVAPFAGRIAALEE 190
Query: 375 VNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFL 434
++ V+ A +E ++ + + +W++ +++E+++RD+LH P Y E+LE++ R L
Sbjct: 191 LHMVLHNAA--SEFRQQELVISMNDLTEWLRKQHLIEVLVRDNLHHPSYCERLERVFRVL 248
Query: 435 IKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLA 468
++ A+++ DLD +W Q +HD I +NVH+L+A
Sbjct: 249 LERNAVTVDDLDILWNVQHERHDVIQRNVHDLIA 282
>gi|340382510|ref|XP_003389762.1| PREDICTED: hypothetical protein LOC100636631 [Amphimedon
queenslandica]
Length = 813
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 5/177 (2%)
Query: 412 IVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLA 471
+ L + L QY +K++ I+ FL + LS +L+ +W Q K+ A V+N+H +LA A
Sbjct: 272 VYLLNMLSLAQYCDKVKSIVEFLGTD--LSTDELNTIWDMQVDKNPAQVENIHNILAYAA 329
Query: 472 WDFSPVQLDHLFVCFQASWTSANR-KQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
FSP +D LF Q SW A+ + EKLL LI ++ +DD+ G A K+L L W LAH
Sbjct: 330 SRFSPQHMDTLFQLIQQSWEKASSDRYREKLLGLIGKIGKDDRTGKTASKILELLWGLAH 389
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQI 587
+ +++E AL SH IL S +D K ++ C+E+ K +WVV AL Q+
Sbjct: 390 LPQLSREMVELALDSHHSILIESF-HTKDSDKRNYIGKCVEDIK-KCQWVVSALLQL 444
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 12/155 (7%)
Query: 1 PPPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQ 60
P P SSD Q + +E + +FP+ L+ + + +W +P E+
Sbjct: 140 PQAEDPIPSSDNATPQDTPTTRE-------TSIEFPLTHFYELEGRTHTDQWSIPYKREE 192
Query: 61 ELECLIKAAIELCKTNSDVD--SEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYN 118
L + A I + K + V E C +F + + F K+L DAV W +I I
Sbjct: 193 SLGVCMLATIRMMKEGAGVAEADENCVKFLQRTMPSCFDKLLAHDAVFRWDESIMKGIRE 252
Query: 119 NCQKLLELIVLKLGQDVFP--LLDILTMVFNPCNK 151
L+ELI ++L P LL++L++ C+K
Sbjct: 253 MTLILMELISVRLRYKPVPVYLLNMLSLA-QYCDK 286
>gi|256073747|ref|XP_002573190.1| ubiquitin-specific peptidase 9X (C19 family) [Schistosoma mansoni]
Length = 2889
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 73/123 (59%)
Query: 32 TCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREG 91
T FPV L+S +S W VPVLP+ +LE ++ A+I + K DV S+ C RF+ +G
Sbjct: 44 TTLFPVHAFNTLNSLLSRPHWQVPVLPDSQLETILLASINMAKHGEDVHSQDCLRFYSDG 103
Query: 92 LSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNK 151
L SF KI DDAV W +I + IY N +EL +K D +L++ +++F+P ++
Sbjct: 104 LISSFQKIFRDDAVTRWDSHILHFIYANSLLGIELCSIKAKSDCLAILELESILFDPNSQ 163
Query: 152 FHT 154
FHT
Sbjct: 164 FHT 166
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 477 VQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMT 536
+ L+ ++ FQ SW A ++Q E+L++LI LAE D DG+M K L+L W A S T
Sbjct: 396 LSLNVIYRFFQQSWKKATKRQRERLIDLITMLAEQDTDGMMMQKTLDLLWDWAISLKFST 455
Query: 537 DIMEQALASHLKILDYSCSQERD--KQKTIWLQTCIEEFKSNPK----WVVPALRQIKDI 590
D+M +L SH KIL SC+ + + +++WL K P ++PA +Q +I
Sbjct: 456 DLMNASLKSHAKIL--SCNNKPFICQLRSVWLGKLASFLKIEPNTDEGCLLPAAKQFIEI 513
Query: 591 CCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIK 625
LY G N + + S + N ++ +D +I+
Sbjct: 514 ANLYNTGSP-NENTLIQSINQRHNVLKAAVDCIIQ 547
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 27/136 (19%)
Query: 190 LVDLINLFGSMGGFQILLERF------------------------QNKST--LTIPVIFA 223
LVD INLFG + GF L RF N T L++ +I A
Sbjct: 255 LVDFINLFGRLNGFDRLKARFLELDNKYHWDQKQKDMLQQQLQQQSNDQTEFLSLSLINA 314
Query: 224 LIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNE-SKNDAISVIIKS 282
+ PF YL+ I +YF PI+ IV L +L D+++K+E K E K+D I+ + S
Sbjct: 315 YLHPFALCSNYLSDSVIEEYFKPIVTIVVNYLSHLNDDQIKRETKKEMRKDDFITGLKLS 374
Query: 283 CKLLAARVPHQEDTEI 298
L R+P + +I
Sbjct: 375 LCTLTKRIPSSTEDDI 390
>gi|360045499|emb|CCD83047.1| ubiquitin-specific peptidase 9X (C19 family) [Schistosoma mansoni]
Length = 2888
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 73/123 (59%)
Query: 32 TCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREG 91
T FPV L+S +S W VPVLP+ +LE ++ A+I + K DV S+ C RF+ +G
Sbjct: 44 TTLFPVHAFNTLNSLLSRPHWQVPVLPDSQLETILLASINMAKHGEDVHSQDCLRFYSDG 103
Query: 92 LSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNK 151
L SF KI DDAV W +I + IY N +EL +K D +L++ +++F+P ++
Sbjct: 104 LISSFQKIFRDDAVTRWDSHILHFIYANSLLGIELCSIKAKSDCLAILELESILFDPNSQ 163
Query: 152 FHT 154
FHT
Sbjct: 164 FHT 166
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 477 VQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMT 536
+ L+ ++ FQ SW A ++Q E+L++LI LAE D DG+M K L+L W A S T
Sbjct: 396 LSLNVIYRFFQQSWKKATKRQRERLIDLITMLAEQDTDGMMMQKTLDLLWDWAISLKFST 455
Query: 537 DIMEQALASHLKILDYSCSQERD--KQKTIWLQTCIEEFKSNPK----WVVPALRQIKDI 590
D+M +L SH KIL SC+ + + +++WL K P ++PA +Q +I
Sbjct: 456 DLMNASLKSHAKIL--SCNNKPFICQLRSVWLGKLASFLKIEPNTDEGCLLPAAKQFIEI 513
Query: 591 CCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIK 625
LY G N + + S + N ++ +D +I+
Sbjct: 514 ANLYNTGSP-NENTLIQSINQRHNVLKAAVDCIIQ 547
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 27/136 (19%)
Query: 190 LVDLINLFGSMGGFQILLERF------------------------QNKST--LTIPVIFA 223
LVD INLFG + GF L RF N T L++ +I A
Sbjct: 255 LVDFINLFGRLNGFDRLKARFLELDNKYHWDQKQKDMLQQQLQQQSNDQTEFLSLSLINA 314
Query: 224 LIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNE-SKNDAISVIIKS 282
+ PF YL+ I +YF PI+ IV L +L D+++K+E K E K+D I+ + S
Sbjct: 315 YLHPFALCSNYLSDSVIEEYFKPIVTIVVNYLSHLNDDQIKRETKKEMRKDDFITGLKLS 374
Query: 283 CKLLAARVPHQEDTEI 298
L R+P + +I
Sbjct: 375 LCTLTKRIPSSTEDDI 390
>gi|443683606|gb|ELT87806.1| hypothetical protein CAPTEDRAFT_215537 [Capitella teleta]
Length = 376
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 149/355 (41%), Gaps = 70/355 (19%)
Query: 34 KFPVEKLAILDSKISSSRWVVPVLPEQEL-ECLIKAAIELCKTNSDVDSEPCQRFFREGL 92
+FP L L++++ ++ W +P E+ L +CL+ A + S+ D+ C+RF + +
Sbjct: 79 EFPEGNLYELENRVFTNSWSIPYKKEESLGKCLVAATRLAAEGLSETDNS-CRRFLEKCM 137
Query: 93 SISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLDILTMVFNPCN 150
F K++T AV W I IY+ Q L++L+ ++L + P LL ++ + F P
Sbjct: 138 PECFQKLMTSGAVLRWGREIQEGIYDMLQLLIDLVAIRLRHEPIPVELLGVIALTFTPET 197
Query: 151 KFHTFNSNQQSISVPVNSNIADDEIFAR----------PIDYYKNQRGWLVDLINLFGSM 200
+FH+ N ++ + +A I + Q ++ I++F
Sbjct: 198 EFHSKNKEKKPDKAYFEDKFGSGQCYATSPSGILKSSVSIFLFSLQDSKVIFKISIFAEK 257
Query: 201 GGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTD 260
GF ++ + + + P++ AL+ PFG EYL + + P L+ + ++NL
Sbjct: 258 DGFSN-IQHWLTQDNVDAPILAALLAPFGNCAEYLNVSVVKPILGPGLDRAVKFVQNLKP 316
Query: 261 EELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESK 320
++LK +A + C +LA
Sbjct: 317 DDLKDKA-----------VSSVCDMLA--------------------------------- 332
Query: 321 NDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEV 375
S KLL + D VK+++ RL +L +L+ FN +MNAL EV
Sbjct: 333 ---------SMKLLCLQC--WPDDVKKIDQLRLDFVLNMLKSPHFNARMNALKEV 376
>gi|380802123|gb|AFE72937.1| putative ubiquitin carboxyl-terminal hydrolase FAF-Y, partial
[Macaca mulatta]
Length = 93
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 66/96 (68%), Gaps = 5/96 (5%)
Query: 543 LASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLY-EPGQNLN 601
L++H+KILDYSCSQ+RD QK W+ IEE + N KWV+PAL+QI++IC L+ E QNL+
Sbjct: 1 LSAHIKILDYSCSQDRDAQKIQWIDHFIEELRGNDKWVIPALKQIREICSLFGEAPQNLS 60
Query: 602 SHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNL 637
+ RSH R +I+ L +NH+L+ L+ NL
Sbjct: 61 Q----TQRSHHIFYRHDLINQLQQNHALVTLVAENL 92
>gi|350645745|emb|CCD59507.1| ubiquitin-specific peptidase 24 (C19 family) [Schistosoma mansoni]
Length = 2235
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 146/649 (22%), Positives = 231/649 (35%), Gaps = 160/649 (24%)
Query: 28 GPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPC--- 84
G + F + L S+I + +W +P L Q L + AI K N C
Sbjct: 90 GHNISTGFSSLEFNRLQSRIFTEQWDIPCLRSQSLGVCLMGAIYEIKFNGLKTFNLCPEV 149
Query: 85 QRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELI----------------- 127
QRF L TK++T AV +W + ++N + ++ L+
Sbjct: 150 QRFLTLCLKECVTKLMTSQAVFNWDRDTLEGVHNMLELIIRLVCEYMSTLKVSILEEIKE 209
Query: 128 --------------------------VLKLGQDVFP-LLDILTMVFNPCNKFHTF----N 156
VL G +F + IL+M+F+ +H N
Sbjct: 210 YNDKINDREDSVETQPLRDRHLQSIGVLSCGAFLFTEVFHILSMIFDCETNYHQLCRDRN 269
Query: 157 SNQQSISVPVN----------SNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQIL 206
N + + P N NI E P ++Y LV+L+N FG GF L
Sbjct: 270 CNTGTYADPFNDWGQIAQKHLGNIIFAEALPTPRNFY------LVNLLNCFGVYNGFS-L 322
Query: 207 LERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKE 266
L F +S I + + P + +YLTL T+ Y ++ V L NL E+ K
Sbjct: 323 LSWFATQSWSNINLTSIFLLPMAKCCDYLTLYTLKSYAAKVMYRVIWRLSNLCIEDFK-- 380
Query: 267 AKNESKNDAISVIIKSCKLLAAR-----VPHQEDTEIVPE------------ILENLTDE 309
++ I +I S ++L R V + + PE + E D+
Sbjct: 381 ----DRDSRIFELITSIRVLTYRLIDLNVADNLGSLLTPEECSFCLGSLMFTVFEPNWDD 436
Query: 310 ELKKEAKN---ESKND-----AISVIIK---------------------SCKLLAAR-VP 339
+ + KN + ND +ISVI K + +++A R +
Sbjct: 437 VISRYNKNNFNQQLNDQASLFSISVIDKLHYSLLLTAISPPQGVGGATFNGRMMALRELI 496
Query: 340 HQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDR 399
Q + KQ E + + +L + + A + + L D+
Sbjct: 497 QQLEISKQFENVNNSSSNWNRNNQKRSRPIVSLTSASLLATENAAFLAKRQRRRVLRLDQ 556
Query: 400 MAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAI 459
+ WI+DN V+ L L Y+ L R L + ++ DL +W + ++ A
Sbjct: 557 LMIWIQDNEVISKSLH-KLDNTAYMTTLSNFFRSL--GERITNDDLTTLWHRTSHQNGAA 613
Query: 460 VKNVHELLAKLAWD-FSPVQLDHLFVCFQASW----------------TSANRKQT---- 498
V N+ LL LA F+ QL HLF + SW + NRK
Sbjct: 614 VDNILNLLTDLASSRFTQSQLKHLFFLVELSWMNLDLQAISHIFPDIKSDNNRKSKASLI 673
Query: 499 ---------------EKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSD 532
+LL +I R+ +D AD + L W LAHSD
Sbjct: 674 PLPPPDEPSTIRHARARLLNMIGRIGISSRDPNTADMCIELLWRLAHSD 722
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 685 SGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLW 727
+G +CF+ FF+ VN+ EG+ +K +S ++ DLIG ++LW
Sbjct: 947 AGFECFKGFFEKVNLNEGR--MKQVAKSWHVERPDLIGLDFLW 987
>gi|256081783|ref|XP_002577147.1| hypothetical protein [Schistosoma mansoni]
Length = 1845
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 146/649 (22%), Positives = 231/649 (35%), Gaps = 160/649 (24%)
Query: 28 GPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPC--- 84
G + F + L S+I + +W +P L Q L + AI K N C
Sbjct: 90 GHNISTGFSSLEFNRLQSRIFTEQWDIPCLRSQSLGVCLMGAIYEIKFNGLKTFNLCPEV 149
Query: 85 QRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELI----------------- 127
QRF L TK++T AV +W + ++N + ++ L+
Sbjct: 150 QRFLTLCLKECVTKLMTSQAVFNWDRDTLEGVHNMLELIIRLVCEYMSTLKVSILEEIKE 209
Query: 128 --------------------------VLKLGQDVFP-LLDILTMVFNPCNKFHTF----N 156
VL G +F + IL+M+F+ +H N
Sbjct: 210 YNDKINDREDSVETQPLRDRHLQSIGVLSCGAFLFTEVFHILSMIFDCETNYHQLCRDRN 269
Query: 157 SNQQSISVPVN----------SNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQIL 206
N + + P N NI E P ++Y LV+L+N FG GF L
Sbjct: 270 CNTGTYADPFNDWGQIAQKHLGNIIFAEALPTPRNFY------LVNLLNCFGVYNGFS-L 322
Query: 207 LERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKE 266
L F +S I + + P + +YLTL T+ Y ++ V L NL E+ K
Sbjct: 323 LSWFATQSWSNINLTSIFLLPMAKCCDYLTLYTLKSYAAKVMYRVIWRLSNLCIEDFK-- 380
Query: 267 AKNESKNDAISVIIKSCKLLAAR-----VPHQEDTEIVPE------------ILENLTDE 309
++ I +I S ++L R V + + PE + E D+
Sbjct: 381 ----DRDSRIFELITSIRVLTYRLIDLNVADNLGSLLTPEECSFCLGSLMFTVFEPNWDD 436
Query: 310 ELKKEAKN---ESKND-----AISVIIK---------------------SCKLLAAR-VP 339
+ + KN + ND +ISVI K + +++A R +
Sbjct: 437 VISRYNKNNFNQQLNDQASLFSISVIDKLHYSLLLTAISPPQGVGGATFNGRMMALRELI 496
Query: 340 HQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDR 399
Q + KQ E + + +L + + A + + L D+
Sbjct: 497 QQLEISKQFENVNNSSSNWNRNNQKRSRPIVSLTSASLLATENAAFLAKRQRRRVLRLDQ 556
Query: 400 MAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAI 459
+ WI+DN V+ L L Y+ L R L + ++ DL +W + ++ A
Sbjct: 557 LMIWIQDNEVISKSLH-KLDNTAYMTTLSNFFRSL--GERITNDDLTTLWHRTSHQNGAA 613
Query: 460 VKNVHELLAKLAWD-FSPVQLDHLFVCFQASW----------------TSANRKQT---- 498
V N+ LL LA F+ QL HLF + SW + NRK
Sbjct: 614 VDNILNLLTDLASSRFTQSQLKHLFFLVELSWMNLDLQAISHIFPDIKSDNNRKSKASLI 673
Query: 499 ---------------EKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSD 532
+LL +I R+ +D AD + L W LAHSD
Sbjct: 674 PLPPPDEPSTIRHARARLLNMIGRIGISSRDPNTADMCIELLWRLAHSD 722
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 685 SGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLW 727
+G +CF+ FF+ VN+ EG+ +K +S ++ DLIG ++LW
Sbjct: 947 AGFECFKGFFEKVNLNEGR--MKQVAKSWHVERPDLIGLDFLW 987
>gi|1490348|emb|CAB01555.1| unknown [Mus musculus]
Length = 89
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 121 QKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFARPI 180
+L+EL V KL QD FPLL++L M NP KFH +N + SV + + +DE+FAR
Sbjct: 2 HRLVELCVAKLAQDWFPLLELLAMALNPHFKFHIYNGTRPCESVSSSVQLPEDELFARSP 61
Query: 181 DYYKNQRGWLVDLINLFGSMGGFQILLER 209
D ++ +GWLVDL+N FG++ GFQIL +R
Sbjct: 62 D-PRSPKGWLVDLLNKFGTLNGFQILHDR 89
>gi|330801722|ref|XP_003288873.1| hypothetical protein DICPUDRAFT_98163 [Dictyostelium purpureum]
gi|325081066|gb|EGC34596.1| hypothetical protein DICPUDRAFT_98163 [Dictyostelium purpureum]
Length = 2851
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 138/284 (48%), Gaps = 24/284 (8%)
Query: 307 TDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFR---LKIILRLLQIS 363
TDEE K NE+K D + +IIK + + DT E+ L++ L+ +
Sbjct: 194 TDEEFK----NENKKD-LDLIIKHLYGIVNNI--NADTTNLQELIHNNGLQVSLKCFKSP 246
Query: 364 SFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQY 423
S + LN++ + + P + ++ P+++ +W+K+NNV+E++ +++H Q
Sbjct: 247 SLFQRNAGLNDIIRFCKSESPLPRQL--HHYVPPNKIVEWLKENNVIELLYGETMH-IQL 303
Query: 424 VEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLF 483
++K IL+F+ ++KA LD +W A GKH+ I ++E + +A P +D+LF
Sbjct: 304 LQKCTDILKFIAEQKAFDRKYLDLIWNASEGKHETIENAIYETIGSIAPLLPPEDVDYLF 363
Query: 484 VCFQASWTSANRKQTEKLLELIRRLAED-DKDGVMADKVLNLFWSLAHSD-DVMTDIMEQ 541
Q S QT L L+R L + D K L +FW+L + D+ ++ E
Sbjct: 364 EKIQLIPFSHYTVQT---LHLVRSLTQRISSDADYIPKGLEIFWNLIQDECDINLELSEM 420
Query: 542 ALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALR 585
+L + Y +Q+ +L+ CI+ + + V+ +LR
Sbjct: 421 SLNILQDSIHYF-----PRQRVEYLKKCIKNIEDHHS-VILSLR 458
>gi|47219293|emb|CAG10922.1| unnamed protein product [Tetraodon nigroviridis]
Length = 236
Score = 78.2 bits (191), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + D+ S E +C G + +FP L L+S++ + W +P E+
Sbjct: 82 PPP-----AYHDVVDSERSNDENGNCSGG-SMEFPTTNLYELESRVFTDHWSIPYKREES 135
Query: 62 L-ECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNC 120
L +CLI A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 136 LGKCLI-ASTCLARHGLAEADENCKRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNML 194
Query: 121 QKLLELIVLKLGQDVFP--LLDILTMV 145
L+EL+ ++ QD P L+ +LTMV
Sbjct: 195 MLLVELVAERVKQDPVPVNLMGVLTMV 221
>gi|66820084|ref|XP_643687.1| ubiquitin domain-containing protein [Dictyostelium discoideum AX4]
gi|60471818|gb|EAL69773.1| ubiquitin domain-containing protein [Dictyostelium discoideum AX4]
Length = 2991
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 138/304 (45%), Gaps = 27/304 (8%)
Query: 394 WLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQA 453
++ P ++ +W+K+N V+E++ ++ H Q ++K IL+FL ++KA LD +W+A
Sbjct: 290 YVAPHKIVEWLKENQVVELLYGETSH-IQLLQKCTDILKFLAEQKAFDRKYLDLIWSASE 348
Query: 454 GKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDK 513
GKH+ I +++ + +A P +D+LF Q T+ L L+R L + +
Sbjct: 349 GKHETIENAIYDSIGAIAPLLPPEDIDYLFDKVQM---IPYNHYTQITLNLVRSLTQRQQ 405
Query: 514 DGVMADKV----LNLFWSLAHSD-DVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQT 568
+D + L++FW+L D DV D+ +L S + Q+ +L
Sbjct: 406 QATNSDGITSRGLDIFWNLMQEDCDVCNDLSNASLVSLQDSFQF-----YPNQRGHFLTR 460
Query: 569 CIEEFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAP----LSSRSHSSNNRQSIIDILI 624
++ + VV I E + + H ++ ++ ++I+ +
Sbjct: 461 ALDHIDKHRSVVVSLRLVFHLINSFAEKKKKRDLHGGNNNNNNNMMNNEAEMANVIESID 520
Query: 625 KNHSLIMLITNNL------CSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPE--EEWL 676
H L+ L+ N+L C + + +N NA+N V+ G +P++ P+ +++
Sbjct: 521 SQHHLVDLLYNHLVYYTTQCKQIISNGYNTDRNAMN-VDGGGGGSDKHPYKPPQACDDYT 579
Query: 677 TPDR 680
DR
Sbjct: 580 FADR 583
>gi|393910513|gb|EJD75910.1| hypothetical protein LOAG_17032 [Loa loa]
Length = 195
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%)
Query: 33 CKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGL 92
+ P L L ++ +RWVVPVLP QELE L++ AI L K D S+ + F +GL
Sbjct: 54 TELPSGMLTRLFDQLHRTRWVVPVLPNQELEGLMEVAIVLIKRGIDKTSKFFEGFLEKGL 113
Query: 93 SISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQ 133
++F K++ D+A+ WK IH I+ + + L + K+ Q
Sbjct: 114 LVAFDKLMNDEAMKDWKIEIHRFIWLSVARFLVMFTEKMRQ 154
>gi|355728149|gb|AES09432.1| putative ubiquitin carboxyl-terminal hydrolase FAF-X [Mustela
putorius furo]
Length = 121
Score = 70.5 bits (171), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/96 (44%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFR 89
VPVLP+ ELE L++AAI+L K DV SE CQRFFR
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFR 121
>gi|403350685|gb|EJY74810.1| Ubiquitin carboxyl-terminal hydrolase family protein [Oxytricha
trifallax]
Length = 2708
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 157/359 (43%), Gaps = 53/359 (14%)
Query: 188 GWLVDLINLFGSMGGFQILLERFQ---NKSTLTIPV-IFALIR-PFGQVHEYLTLPTILK 242
G +++ +N F +GGF +++ + + +P +F L PF E
Sbjct: 300 GQMMNFVNHFAEIGGFDAIIDYLKQGGDSQDEKVPFDLFTLFTFPFKNCGEIFAPTFASH 359
Query: 243 YFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCK-LLAARVPHQEDTEIVPE 301
Y I ++V + N+T++ELK E ++I ++ K L + E E+V
Sbjct: 360 YVTSIRDLVVHRIRNMTEKELK-----EIDKESIGRVLNDLKDFLTLGLSDTETAEMV-- 412
Query: 302 ILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQED---TVKQLEIFRLKIILR 358
ES +S+ L R+ D + +LE + + +
Sbjct: 413 ----------------ESNQLQVSLRFLKSTYLEKRLKGISDIKWMIDRLEWAQNQAYNK 456
Query: 359 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSL 418
+Q+ N +E+N I G+ + P+ WLT + M WI + +LEIVL ++
Sbjct: 457 NMQMDQRFRGGNIDSEMNG-IKGI-----KGPK--WLTSEIMRDWIINEKILEIVLGENT 508
Query: 419 HQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQ 478
H + V++ +L+FL K+ AL + +D +W +Q GKH+ +V+ V++++ +L
Sbjct: 509 H-LEIVKRSSCLLKFLAKQDALPIESVDLIWKSQLGKHEEMVRVVYQMIQELVPFIQGKY 567
Query: 479 LDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
+D + Q S + EK LE + KD M K L + + H++D +++
Sbjct: 568 IDQFYARIQQVPPS---QYDEKFLEFL-------KDFTM--KSLESHYDIKHNEDSISE 614
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 683 TESGLKCFEKFFKSVNIGEGKLVLKVKK-RSLLLDNADLIGAEYLWRV-ITNAGEDIAFR 740
T + +KCF+++FK +N E + ++ KK R + +N LIG + LWR+ I + E
Sbjct: 881 TYAQVKCFQRYFKIINNSERNIEIQRKKMRVISFEN--LIGLDTLWRMAIESDNEKSRDE 938
Query: 741 AIDLLKEVSTHLGPKLQSSL-----TQFHKTFIAECLDRLRAHYDTI 782
+IDLL V HL KL S+ + FI C+ L+ D++
Sbjct: 939 SIDLL--VDLHL--KLDQSIPLQQQQEIWGRFIQSCMTNLQQEDDSV 981
>gi|312073486|ref|XP_003139541.1| hypothetical protein LOAG_03956 [Loa loa]
Length = 377
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%)
Query: 34 KFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLS 93
+ P L L ++ +RWVVPVLP QELE L++ AI L K D S+ + F +GL
Sbjct: 254 ELPSGMLTRLFDQLHRTRWVVPVLPNQELEGLMEVAIVLIKRGIDKTSKFFEGFLEKGLL 313
Query: 94 ISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQ 133
++F K++ D+A+ WK IH I+ + + L + K+ Q
Sbjct: 314 VAFDKLMNDEAMKDWKIEIHRFIWLSVARFLVMFTEKMRQ 353
>gi|281203474|gb|EFA77674.1| ubiquitin domain-containing protein [Polysphondylium pallidum
PN500]
Length = 2735
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 86/157 (54%), Gaps = 8/157 (5%)
Query: 313 KEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNAL 372
+E KNESK D + +K + + + T+ ++++ + I L+ + S + L
Sbjct: 164 EEFKNESKKD-LDFCLKYLNSIVSNITENPFTM-MIQLYSMDIALKCFKSVSLEKRNAGL 221
Query: 373 NEVNKVIAGVAY--YPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKI 430
N++ + +Y Y ++P + +P+R+ +WI++N ++E++ +++H Q ++K I
Sbjct: 222 NDIIRFTKFESYHAYTRQYP---YCSPERVVEWIRENKIVELLFGETMH-IQLLQKCTDI 277
Query: 431 LRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELL 467
L+FL ++KA LD +W+A GKH+ I N + +
Sbjct: 278 LKFLAEKKAFQRKYLDLMWSAAEGKHETIENNRFQFM 314
>gi|355727950|gb|AES09364.1| ubiquitin specific peptidase 24 [Mustela putorius furo]
Length = 157
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Query: 323 AISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGV 382
+I ++ + KLL R Q D V ++ RL I+LR+L+ F+ KMN+L EV K+I
Sbjct: 26 SIPELLSAIKLLCMR--FQPDLVTVVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLIEDS 83
Query: 383 AYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSL 442
+ + DR+ W+ +N+VL I L ++ Q QY ++++ I+ L LSL
Sbjct: 84 TLS---KSVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELL--GSKLSL 138
Query: 443 GDLDAVWAAQAGKHDAIVK 461
+L +W Q+G+ +++
Sbjct: 139 DELTKIWKIQSGQSSTVIE 157
>gi|402586383|gb|EJW80321.1| hypothetical protein WUBG_08770, partial [Wuchereria bancrofti]
Length = 392
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 33 CKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGL 92
+ P L L ++ +RWVVPVLP QELE L++ AI L K +D S+ + F +GL
Sbjct: 312 TELPSGMLTRLFDQLHRARWVVPVLPNQELEGLMEVAIVLIKRGTDRTSKFFEGFLEKGL 371
Query: 93 SISFTKILTDDAVHSWKYNIH 113
++F K++ D+A+ WK IH
Sbjct: 372 EVAFDKLMNDEAMKDWKIEIH 392
>gi|328876808|gb|EGG25171.1| ubiquitin domain-containing protein [Dictyostelium fasciculatum]
Length = 2948
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 153/369 (41%), Gaps = 69/369 (18%)
Query: 276 ISVIIKSCKLLAARVPHQEDTEIVPEILENL---TDEELKKEAKNESKNDAISVIIKSCK 332
+++I K K + + Q+ + V + + +DEE K NE+K D +I
Sbjct: 173 LNIIKKYSKKMETQDTEQDIEQFVKLVFSKVLGTSDEEFK----NENKKDMDLIIKYLNS 228
Query: 333 LLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEV---NKVIAGVAYYPHRH 389
++ +Q ++ F L + + + S + LN++ K+ G Y +
Sbjct: 229 IIVNTTDNQTRFADIIQTFSLDVAFKCFKSPSLEKRNAGLNDIIKYTKINEGYLMYKQGN 288
Query: 390 PEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVW 449
++ +++ WIK+N ++EI+ +++H Q ++K IL+FL+++K LD +W
Sbjct: 289 T----ISQEKLVNWIKENKIVEILYGETMHM-QLLQKCTDILKFLVEKKVFERKYLDLMW 343
Query: 450 AAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLA 509
A GKH+ I ++E + ++ ++++L+ + S QT +L+ + +
Sbjct: 344 NAAEGKHETIENVIYETIGNISQVLPLCEVEYLYQKIKEIPLSQYTNQTLQLISCLTQHR 403
Query: 510 EDDKDGVMA-----------------------------------------------DKVL 522
+ + A + L
Sbjct: 404 THHYNSINAIDSDISSSPNYSPSSSSVQQQQQQQGQQQSSSQPPSPTSLVQNQTIVSRGL 463
Query: 523 NLFWSLAHSD-DVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVV 581
+FW L D +V ++ +QAL + L++ S +T +LQ C++ K N V+
Sbjct: 464 EIFWMLIQDDSEVSLELAQQALYHLQETLNFHSS-----YRTEYLQKCVDNIK-NHTTVL 517
Query: 582 PALRQIKDI 590
+LR I++I
Sbjct: 518 YSLRIIQNI 526
>gi|321471216|gb|EFX82189.1| hypothetical protein DAPPUDRAFT_302623 [Daphnia pulex]
Length = 667
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 164/374 (43%), Gaps = 62/374 (16%)
Query: 418 LHQPQ---YVEKLEKILRFLIKEKALSLGDLDAVWAAQAG-KHDAIVKNVHELLAKLAWD 473
+H P+ + ++L KI++F++K+ SL + VW Q + A V +H+ + +
Sbjct: 107 IHSPEDKVFFDQLRKIIQFVVKDSTRSL---EPVWEIQNHWTNGAYVVKLHQTVISCVKE 163
Query: 474 FSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLA-EDDKDGVMADKVLNLFWSLAHSD 532
F+ +++L QA W S + Q LL IR LA E D D V +VL++
Sbjct: 164 FTLQHVNYLISGIQARWNSVDVTQRYALLNFIRTLANETDYDDV-PFQVLDVILEFVQCP 222
Query: 533 DVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE--EFKSNPKWVVPALRQIKDI 590
D ++M+ + KIL+ + + W+ CI+ + + + V+ A++ I+ +
Sbjct: 223 DTPDELMDSCIDIQCKILNDCFNSDLVSH---WILNCIQIIQHREQQRSVMVAMKLIRHL 279
Query: 591 CCLYEPGQNLNSHAPLSSRSHSSNNRQS--IIDILIKNHSLIMLITNNLCSLLQISSFNG 648
C LY + S S + + +QS +++ + I + N LL ++
Sbjct: 280 CYLY----------AVKSASSNDHYQQSAEFTELVWLKYKEIYMFLNQEWHLLDLA---- 325
Query: 649 KMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESGLKCFEKFFKSVNIGEGKLVLKV 708
V +++A +A D +L +G + ++ +++ +
Sbjct: 326 -------VAEIVAYMA--------------DVRLNWTGTN--QAHPAAIQERLTFILMIL 362
Query: 709 KKRSLLLDNADLIGAEYLWR-----VITNAGEDIAFR-AIDLLKEVSTHLGPKLQSSLTQ 762
K L+L ++D I +W ++ + D+ F A DLLKE +LG +L + +
Sbjct: 363 KYGQLVLSDSDAIS---IWTCLVGGTVSASDSDVCFDWAYDLLKETIIYLGSRLVACSIE 419
Query: 763 FHKTFIAECLDRLR 776
+ I +CLDR R
Sbjct: 420 IPENVIGDCLDRFR 433
>gi|417413764|gb|JAA53194.1| Putative ubiquitin carboxyl-terminal hydrolase 24, partial
[Desmodus rotundus]
Length = 1323
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 147/378 (38%), Gaps = 112/378 (29%)
Query: 521 VLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK------ 574
VL++ W LAH + + +++QAL HL IL + + ++ K ++ CIE+ K
Sbjct: 1 VLDVLWELAHLPTLPSSLIQQALDEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWS 59
Query: 575 --------------SNPK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ- 617
+NP+ WVVPALRQ+ +I +RS Q
Sbjct: 60 GLEKKKDGFKSSQLNNPQFVWVVPALRQLHEI-----------------TRSFIKQTYQK 102
Query: 618 ---SIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPH------ 668
SII L KN ++ L+T +L + ++++ L V V Y +
Sbjct: 103 QDKSIIQDLKKNFEIVKLVTGSLIACHRLAAAVAGPGGLTGVTLVDGRYTYREYLEAHLK 162
Query: 669 -----------------------------------RHPEEEWLTPDRQLTESG------- 686
R EW T + ES
Sbjct: 163 FLAFFLQEATLYLGWNRAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFK 222
Query: 687 -----LKCFE------KFFKS----VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-I 730
L+ +E FK+ VN+ + +L K + L ++ +LIG +++W++ +
Sbjct: 223 EKILKLESYEITMNGFNLFKTFFENVNLCDHRL--KRQGAQLYVEKLELIGMDFIWKIAM 280
Query: 731 TNAGEDIAFRAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYR 789
+ E+IA AI L+ S +L P+L+ HK FIA+C RL A +G T
Sbjct: 281 ESPDEEIANEAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLT 339
Query: 790 PILPEARQIWTALAQEAI 807
+ A ++ TA A +
Sbjct: 340 HAVTRATKMLTATAMPTV 357
>gi|341886262|gb|EGT42197.1| hypothetical protein CAEBREN_28849 [Caenorhabditis brenneri]
Length = 470
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 343 DTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVI------AGVAYY-PHRHPEEEWL 395
D + RL + + ++ +NAL E+ + G+ P H EE+
Sbjct: 258 DVASTTQAARLDYLRKWIRCPQMECILNALEELGTIADRFHRNGGLTITRPKSHVNEEFF 317
Query: 396 TPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGK 455
KW+++N VL+IVL ++ YVE+++ IL+++ E L+L D++ VW+ + G+
Sbjct: 318 -----KKWLEENKVLQIVLTGNMDHVVYVERIQPILQYMTPE--LTLDDMEFVWSLRKGR 370
Query: 456 HDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLA-EDDKD 514
V+N ++++ ++ + Q++ L F+ S+ S + E + +A + +KD
Sbjct: 371 MGVSVENFNKIMEFISKSVNNEQIEWLIELFKKSFRSRETRLYESIFNFAYTIANQKEKD 430
Query: 515 GVMADKVLNLFWSL 528
K+ N+ W L
Sbjct: 431 DECRLKICNIIWEL 444
>gi|392891093|ref|NP_495931.3| Protein T24B8.7, isoform b [Caenorhabditis elegans]
gi|215415135|emb|CAA92762.3| Protein T24B8.7, isoform b [Caenorhabditis elegans]
Length = 2956
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 386 PHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDL 445
P H EE+ KW+++N VL+IVL ++ YVE+++ IL+++ E L+ DL
Sbjct: 541 PKSHVNEEFF-----KKWLEENKVLQIVLTGNMDHVVYVERIQPILQYMTPE--LTFDDL 593
Query: 446 DAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
VW+ + G+ V N ++++ ++ + Q++ L F+ S+ S + E +
Sbjct: 594 KFVWSLRKGRMGVSVDNFNKIMEFISKSVNNEQIEWLIELFKKSFRSRETRLYEPIFNFS 653
Query: 506 RRLA-EDDKDGVMADKVLNLFWSLAH 530
+A + D+D K+ N+ W L H
Sbjct: 654 YTIAIQKDRDDECKLKICNVIWELIH 679
>gi|392891091|ref|NP_495932.3| Protein T24B8.7, isoform a [Caenorhabditis elegans]
gi|215415134|emb|CAA92761.3| Protein T24B8.7, isoform a [Caenorhabditis elegans]
Length = 2953
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 386 PHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDL 445
P H EE+ KW+++N VL+IVL ++ YVE+++ IL+++ E L+ DL
Sbjct: 541 PKSHVNEEFF-----KKWLEENKVLQIVLTGNMDHVVYVERIQPILQYMTPE--LTFDDL 593
Query: 446 DAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
VW+ + G+ V N ++++ ++ + Q++ L F+ S+ S + E +
Sbjct: 594 KFVWSLRKGRMGVSVDNFNKIMEFISKSVNNEQIEWLIELFKKSFRSRETRLYEPIFNFS 653
Query: 506 RRLA-EDDKDGVMADKVLNLFWSLAH 530
+A + D+D K+ N+ W L H
Sbjct: 654 YTIAIQKDRDDECKLKICNVIWELIH 679
>gi|341879089|gb|EGT35024.1| hypothetical protein CAEBREN_28637 [Caenorhabditis brenneri]
Length = 3190
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 343 DTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVI------AGVAYY-PHRHPEEEWL 395
D + RL + + ++ +NAL E+ + G+ P H EE+
Sbjct: 452 DVASTTQAARLDYLRKWIRCPQMECILNALEELGTIADRFHRNGGLTITRPKSHVNEEFF 511
Query: 396 TPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGK 455
KW+++N VL+IVL ++ YVE+++ IL+++ E L+L D+ VW+ + G+
Sbjct: 512 -----KKWLEENKVLQIVLTGNMDHVVYVERIQPILQYMTPE--LTLDDMKFVWSLRKGR 564
Query: 456 HDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLA-EDDKD 514
V+N ++++ ++ + Q++ L F+ S+ S + E + +A + +KD
Sbjct: 565 MGVSVENFNKIMEFISKSVNNEQIEWLIELFKKSFRSRETRLYEPIFNFAYTIANQKEKD 624
Query: 515 GVMADKVLNLFWSL 528
K+ N+ W L
Sbjct: 625 DECRLKICNIIWEL 638
>gi|145484667|ref|XP_001428343.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395428|emb|CAK60945.1| unnamed protein product [Paramecium tetraurelia]
Length = 2223
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/378 (19%), Positives = 169/378 (44%), Gaps = 43/378 (11%)
Query: 303 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQI 362
++++ L K N+ K ++ + + KL+ + + ++ E +K+ + L++
Sbjct: 306 MKDMIINRLHKLTTNDLKESNLNPVFQIFKLIPQQFSSIINISQECEATEIKLAITLIKS 365
Query: 363 SSFNGKMNALNEVNKVIAGVAYYP----HRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSL 418
S K+ + E+ ++I V ++ + PDR+ K++++ V +I+L+++
Sbjct: 366 SILEKKIKGVKELTEIIDKVTTSKNSMMYQSITSTYFNPDRLGKFLQEEKVFDILLQEAG 425
Query: 419 HQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQ 478
H + ++ ILRF++ + S D++ +W A +H+ ++V+E+++ +A + Q
Sbjct: 426 H-AEVFKRAAPILRFMVDQVNSSTKDIEQLWEASQMRHETEAQSVYEVISDIARVMNHEQ 484
Query: 479 LDHLFVCFQASWTSANRKQTE-KLLELIRRLAEDDKDGVM----ADKVLNLFWSLAH-SD 532
+ +F T+ ++K + L+ ++ + + + A LN+ W+L
Sbjct: 485 TEIIF----TKLTNFSQKDIDLNLINFMKDFTQSAQKNPIWKNRAIYTLNMMWNLLQDKS 540
Query: 533 DVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVP-ALRQIKDIC 591
D+ +++E + + L QER++ + Q C+E + + + P L ++ I
Sbjct: 541 DLNPNLLEPLMTGFISCL----KQEREQ----YQQLCLENLRKS--YSFPQCLHILQKII 590
Query: 592 CLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMN 651
Y GQ S S + N+ ++K H +I LI NL ++ +N
Sbjct: 591 ESYGQGQ-----VYFSVSSEDNLNK------IMKEHQMIDLIVKNL------ENYKANVN 633
Query: 652 ALNEVNKVIAGVAYYPHR 669
+ ++ G + R
Sbjct: 634 TCQDCFAILTGKVAHAQR 651
>gi|358333743|dbj|GAA52215.1| ubiquitin carboxyl-terminal hydrolase 24 [Clonorchis sinensis]
Length = 3308
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 165/781 (21%), Positives = 276/781 (35%), Gaps = 208/781 (26%)
Query: 28 GPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNS--DVDSEP-C 84
G + +F + + L S++ +W +P L Q L I AI + + ++S P C
Sbjct: 70 GHDLSVEFSPAEFSHLQSRVYVDQWDIPCLRSQALGKCILGAIHELRADGLRSLESNPDC 129
Query: 85 QRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLG------------ 132
++F L+ TK+ T AV +W ++N + + LI L
Sbjct: 130 RQFILVCLTDCVTKLTTSQAVFNWDRETLEGVHNMLELAVRLICEYLAAFKRMVLEENKP 189
Query: 133 --------------------------QDVFPLLDILTMVFNPCNKFH-----------TF 155
Q + LL +L ++F+ +H T+
Sbjct: 190 GKTSLTEDSAIPDPRRSTQKSPKCTAQFAWELLRLLALIFDCEINYHQLCRDRSTNTGTY 249
Query: 156 NSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQIL-LERFQNKS 214
+ ++ + + +FA + +N +LV+LIN FG GF++L Q
Sbjct: 250 SDAFNDWTIIIEEKLEHASVFAEILPSPRN--FYLVNLINCFGVFDGFRLLHWLGTQRWI 307
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
T IF L+ T +L Y + L I +L L S ND
Sbjct: 308 TSKDSRIFDLV----------TCLRVLTYRLSDLGIAHCLLPFL------------SLND 345
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIK-SCKL 333
+ A + P + D E P+ L E L + + AI+ + K C L
Sbjct: 346 STD---------AYQSPFEPDWETFPQALPESPPEYL-------TTSFAINKVDKLHCTL 389
Query: 334 L--AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNAL-NEVNKVIAGVAYY---PH 387
L A PH V SFNG+M AL N V +V A H
Sbjct: 390 LLSALSPPHGSAGV------------------SFNGRMLALRNLVEQVEAAKGAGDLDSH 431
Query: 388 RHPEEEWLTP-------------------------------DRMAKWIKDNNVLEIVLRD 416
E L P + + W ++ E++L+
Sbjct: 432 SGGERSGLRPRPVHQYSSATLLATENAVFLLRRARRRAIRFEYLMTWFREK---EVILKS 488
Query: 417 --SLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWD- 473
+L Y+ L ++ R L + ++ DL VW + A V N+ LL +A
Sbjct: 489 MHNLDNTAYMTTLGQLFRLLGER--ITSADLTTVWHRTTTQPGAAVDNILNLLTDVASTR 546
Query: 474 FSPVQLDHLFVCFQASWTSANR---------KQTE---------------------KLLE 503
F Q DHLF +ASW + NR KQ + +LL
Sbjct: 547 FIKPQFDHLFYLVEASWLNLNREACCQLGLDKQGQAAARSLVSASNEPSHVRHGRARLLN 606
Query: 504 LIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKT 563
L+ R+ +D D +L W LAH TD +AS ++ Q + ++++
Sbjct: 607 LVGRIGIATRDAWKVDSCADLLWDLAHGTYSRTD----NIASKDDAASFTAGQPKSERRS 662
Query: 564 I-----WLQTCIEEFKSNPKWVVPALRQ----IKDICCLYEPGQNLNSHAPLSSRSHSSN 614
L ++K +P+ + AL Q ++D C + + H L++ H S
Sbjct: 663 AESNGQSLTDAARKYK-HPEPIEAALAQQIVVLRDFRCSGNDQRLRSMHWLLAAVEHISM 721
Query: 615 NRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEE 674
+ +L SL+ LI N + + + + + +N+V+ + Y E+
Sbjct: 722 GSLTYF-MLAYVKSLLELILKNFVGRAKRDNLSELIRTHDLINQVVISLLRY------EQ 774
Query: 675 W 675
W
Sbjct: 775 W 775
>gi|34533821|dbj|BAC86814.1| unnamed protein product [Homo sapiens]
Length = 1332
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + L ++ +LIG +++W++ + + E+IA
Sbjct: 33 EITMNGFNLFKTFFENVNLCDHRL--KRQGAQLYVEKLELIGMDFIWKIAMESPDEEIAS 90
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
AI L+ S +L P+L+ HK FIA+C RL A +G T + A ++
Sbjct: 91 EAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKM 149
Query: 799 WTALAQEAI 807
TA A +
Sbjct: 150 LTATAMPTV 158
>gi|355558045|gb|EHH14825.1| hypothetical protein EGK_00810 [Macaca mulatta]
gi|355745317|gb|EHH49942.1| hypothetical protein EGM_00688 [Macaca fascicularis]
Length = 1875
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + L ++ +LIG +++W++ + + E+IA
Sbjct: 33 EITMNGFNLFKTFFENVNLCDHRL--KRQGAQLYVEKLELIGMDFIWKIAMESPDEEIAN 90
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
AI L+ S +L P+L+ HK FIA+C RL A +G T + A ++
Sbjct: 91 EAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKM 149
Query: 799 WTALAQEAI 807
TA A +
Sbjct: 150 LTATAMPTV 158
>gi|440804380|gb|ELR25257.1| hypothetical protein ACA1_290210 [Acanthamoeba castellanii str.
Neff]
Length = 888
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 123/276 (44%), Gaps = 30/276 (10%)
Query: 297 EIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKII 356
E++ I+ L DEEL+ K + + I++ + + + E T ++ E F L
Sbjct: 18 EVIFTIMLGLGDEELRT-----VKKEDVEEIVRHFEAILKEYAYTE-TWEKSERFCLAFA 71
Query: 357 LRLLQISSFNGKMNALNEVNKVIA------------GVAYYPHRHPE------EEWLTPD 398
L+ + ++ +++ L+ + + I+ G++Y + +P W+
Sbjct: 72 LKCFRSTNLEKRLHGLSYIEEAISMTQRRKYQQWDDGMSYTGYTNPTYRAPQVARWMDSK 131
Query: 399 RMAKWIKDNNVLEIVLRDSLH--QPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKH 456
+ WI++N ++E + + L P+ +++ + +L+F+ EK L+ G LD +W A A +H
Sbjct: 132 YLLAWIQENQIIERLFQSKLSDMHPELIKRSKNLLKFMASEKFLNQGHLDMMWKATATQH 191
Query: 457 DAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGV 516
V+E+L ++ + SP ++L + + +T L+ +
Sbjct: 192 AE--PAVYEVLGAISSNLSPEHQNYLLQLIHSIPFAEYSPRTINLIAQFQNTYSSYPSST 249
Query: 517 -MADKVLNLFWSLAHSDD-VMTDIMEQALASHLKIL 550
+ + +NL W + D V I + AL+ K++
Sbjct: 250 EIKLRTMNLLWQIVQDDSKVEQSIADAALSQLCKVV 285
>gi|340382512|ref|XP_003389763.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like
[Amphimedon queenslandica]
Length = 1354
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGED-IAFR 740
L +G C FF+++N+ E KL K+ L++DN DL G +YLW+ + IA
Sbjct: 157 LDMAGYHCIRSFFETINLAERKL-RKLHSHQLVVDNPDLTGIDYLWKAALEVTDSIIADE 215
Query: 741 AIDLLKEVSTH-LGPKLQSSLTQFHKTFIAECLDRLRA 777
I + +++ + LGPKL+ + H+ FI EC RL +
Sbjct: 216 LISHILQITYNVLGPKLKKEPEKLHRRFIDECFTRLES 253
>gi|299117587|emb|CBN75429.1| ubiquitin domain-containing protein (Partial) [Ectocarpus
siliculosus]
Length = 3210
Score = 60.1 bits (144), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 394 WLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQA 453
W T M W+ + LE + S+H + ++ E IL FL K A+S LD +W++
Sbjct: 455 WATARAMEDWLVEVGFLEELFGCSMHV-ELAKRSEPILAFLAKRNAVSTSQLDLLWSSTV 513
Query: 454 GKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
GKH+A+V+ + ++ L SP + HLF C + S K TE+ L L+
Sbjct: 514 GKHEAVVRVMSPVVLNLVPFLSPHKRLHLFSCVARTPFS---KYTEQTLHLV 562
Score = 41.2 bits (95), Expect = 2.2, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 719 DLIGAEYLWRVITNA-GEDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRA 777
DL G + LW V+ +A G + A DL+ E+ LGPKL+S + F+ CL L+
Sbjct: 1013 DLDGLDTLWEVVLDAAGSQASLAASDLIVELHLRLGPKLKSKAARIGAGFVDTCLHYLQV 1072
Query: 778 HYDTI 782
I
Sbjct: 1073 SVSRI 1077
>gi|440794436|gb|ELR15597.1| ubiquitin domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 2615
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 130/301 (43%), Gaps = 37/301 (12%)
Query: 194 INLFGSMGGFQILLERFQNKSTLT-IPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVP 252
+ FG GGF +++R +K +P+I L+R + L + +Y + + +
Sbjct: 140 VEYFGKRGGFDAIMDRLLDKENKPPLPIIELLLRAIVYTSKVLRRDFVKEYVPKVQQAIF 199
Query: 253 EILENLTDEELKKEAKNESKNDAISVIIKSCK-LLAARVPHQEDTEIVPEILENLT-DEE 310
L T E+KK+AK K+ I KS K LL +P +E + +++E D
Sbjct: 200 HQLLEATQVEMKKDAKTSFKD-----ISKSLKALLGLIMPPEE----IDKVIEGFNLDAA 250
Query: 311 LKKEAKN--ESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKI------ILRLLQI 362
L N E + + + +I K + AR ++D L F K +
Sbjct: 251 LMSLKSNVLERRLNGLKLIRK----MIARATPKDDKKSSLAYFWNKTKQATAAVATAAVA 306
Query: 363 SSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQ 422
+ G + K + EE+ + P+ + W+ DN +L+++ ++ +
Sbjct: 307 PGYGGVAQGQDGEKKEV-----------EEKPIDPNFVLSWLLDNEILKLLFTNT--HVE 353
Query: 423 YVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHL 482
+ + IL FL+ + L++ DLD +W A G+H++ + + E + L + +DH+
Sbjct: 354 LIRQSLGILNFLVSKNKLAVEDLDMLWEASLGRHESEKRVIFETIVSLGQNLPYKTIDHI 413
Query: 483 F 483
F
Sbjct: 414 F 414
>gi|403367797|gb|EJY83722.1| Ubiquitin carboxyl-terminal hydrolase family protein [Oxytricha
trifallax]
Length = 2583
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 148/386 (38%), Gaps = 83/386 (21%)
Query: 138 LLDILTMVFNPCNK-FHTFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINL 196
L DIL F C + FN A E K G +N
Sbjct: 201 LFDILDKCFGGCQRCMKFFNKYSDECLYEGEKQFAAKE--------QKKTNGLQTSFLNA 252
Query: 197 FGSMGGFQILLERF-------QNKSTLTIP--VIFALIRPFGQVHEYLTLPTILKYFMPI 247
FG+M GF +++ + KS P +I ++RPF + Y ILKY
Sbjct: 253 FGNMKGFDAVIDFIDLEIQDSKGKSVKGCPFNLISQILRPFSPITHYADKTFILKY---- 308
Query: 248 LEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLT 307
+D I I S L+NL
Sbjct: 309 -------------------------SDQIRQSITSR-------------------LDNLQ 324
Query: 308 DEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNG 367
+ E+K E +S D I ++ +L P D + E++ LK+ + L+ + F
Sbjct: 325 EFEIK-ELDKDSLVDVIQILKWYLNVLD---PANSDQIA--ELYELKMAEKYLRCNFFEK 378
Query: 368 KMNALNEVNKVIAGVAYYPHRHPEEE------WLTPDRMAKWIKDNNVLEIVLRDSLHQP 421
++ +NE+ + V R+ E WLTP++ ++WI ++E + ++ H
Sbjct: 379 RVRGINELKDIYFKVKNSLSRNRNNENLEYSKWLTPEKYSQWILQQGIIEFIFTENPH-V 437
Query: 422 QYVEKLEKILRFLIK-EKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLD 480
+ +++ +ILR L EK + +D +W+ KH+ I++ +L+ +LA+ + LD
Sbjct: 438 ELIKRSYEILRLLAADEKYFTPEIMDMLWSCCKDKHEDIIRATLDLVQELAF---ILPLD 494
Query: 481 HLFVCFQASWTSANRKQTEKLLELIR 506
L F T EK+++ +R
Sbjct: 495 RLQQFFMKLHTIKESDYDEKMVQFLR 520
>gi|390335942|ref|XP_001185117.2| PREDICTED: uncharacterized protein LOC754306 [Strongylocentrotus
purpuratus]
Length = 638
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 190 LVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILE 249
L LIN FG+ GF+ + +R + L+I + AL+RPFGQ ++ LT TI YF+P ++
Sbjct: 160 LAQLINHFGACRGFEQVRQRLRQARDLSIAHLAALLRPFGQCYQQLTADTIKSYFLPTVD 219
Query: 250 IVPEILENLTDEEL 263
V L + +D +L
Sbjct: 220 AVCSHLLSCSDRQL 233
>gi|403357614|gb|EJY78435.1| Ubiquitin carboxyl-terminal hydrolase family protein [Oxytricha
trifallax]
Length = 3247
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 125/287 (43%), Gaps = 21/287 (7%)
Query: 320 KNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVI 379
+ + I +IIKS R+ +ED K EI +L++ L L+ S ++ + ++N++I
Sbjct: 434 RREKIELIIKSIDNFQRRLISKEDREKLTEILKLEVCLMCLKSSYLERRIQGIRDLNQII 493
Query: 380 AGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKA 439
+ + + + + +W+ DN V IV Q V++ + I++ L++E
Sbjct: 494 RNLRMF---NSNNKAFNGQFLVQWMNDNGVFSIVFEHKRTHLQIVQRCDDIMKLLLQENM 550
Query: 440 LSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTE 499
LS ++ W+ + +++++ A+ F +H+ F+ K
Sbjct: 551 LSESLIEQFWSLTKADYKF---EIYKIINLCAFYFKQ---EHINFFFEQIRQIPVEKLAI 604
Query: 500 KLLELIRRLAEDDKDGVMADKVLNLFWS-LAHSDDVMTDIMEQALASH---LKILDYSCS 555
+ + + L + KD + FW+ + +SD+V D++ + +K+ D S
Sbjct: 605 EEFQCLSELGKYTKDDKFKVNISEFFWNIICNSDNVKEDLVNNCITKFCEMVKLWDLS-- 662
Query: 556 QERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYEPGQNLNS 602
R Q I L + E KS+ +P+LR K + + Q NS
Sbjct: 663 --RKHQFFIDLTKNLSENKSS----IPSLRLFKGLIKDQKDRQYYNS 703
>gi|320168167|gb|EFW45066.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 3668
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 142/355 (40%), Gaps = 53/355 (14%)
Query: 121 QKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFARPI 180
Q + L V + D F LLD T + + NK F N + P AD+E + +
Sbjct: 93 QHAITLTVRHMEDDYFDLLDAGTRLLHNVNKNVLFY-NLGAQPRPSLLERADEEAEMQHV 151
Query: 181 DYYKNQ--RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLP 238
+++ WLV + F ++ GF L+ R + + + + IR + LT
Sbjct: 152 LIVRSRLRSKWLVANLEHFQALNGFDALVRRLNSPQRVPLAIHKVAIRMLSRNVAALTTR 211
Query: 239 TILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEI 298
I +Y I V + NL+D++++ E+K+ S+ + KL
Sbjct: 212 FIHEYGQTIYNAVFLRISNLSDDDIRNESKDTVDQCLASLTVTKAKL------------- 258
Query: 299 VPEILENLTDEELKKEAKNESKNDAI--SVIIKSCKLLAARVPHQEDTVKQLEIFRLKII 356
+ + +DA+ ++ S R P+ E K +
Sbjct: 259 ------------------SPTPSDAMEADMLTLSIAFKYFRSPYLE-----------KRV 289
Query: 357 LRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRD 416
L L + F + + G+ + + +T +A W+ ++ V+E +
Sbjct: 290 LGLTSLKEFASRQLEAQARAAAVTGM-----QGVDSPAMTVAEVAAWLAEHQVIETLFGQ 344
Query: 417 SLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLA 471
++H + V + +++RF+ ++ +D +W A GKH+ IV V+++L ++A
Sbjct: 345 NMHV-ELVRRSAELIRFMAARNTVTSEHIDLIWNASKGKHETIVHAVYQILMEIA 398
>gi|403331330|gb|EJY64605.1| Ubiquitin carboxyl-terminal hydrolase family protein [Oxytricha
trifallax]
Length = 792
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 124/287 (43%), Gaps = 21/287 (7%)
Query: 320 KNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVI 379
+ + I +IIKS R+ +ED K EI +L++ L L+ S ++ + ++N++I
Sbjct: 434 RREKIELIIKSIDNFQRRLISKEDREKLTEILKLEVCLMCLKSSYLERRIQGIRDLNQII 493
Query: 380 AGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKA 439
+ + + + +W+ DN V IV Q V++ + I++ L++E
Sbjct: 494 RNLRMFNSNNKA---FNGQFLVQWMNDNGVFSIVFEHKRTHLQIVQRCDDIMKLLLQENM 550
Query: 440 LSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTE 499
LS ++ W+ + +++++ A+ F +H+ F+ K
Sbjct: 551 LSESLIEQFWSLTKADYKF---EIYKIINLCAFYFKQ---EHINFFFEQIRQIPVEKLAI 604
Query: 500 KLLELIRRLAEDDKDGVMADKVLNLFWS-LAHSDDVMTDIMEQALASH---LKILDYSCS 555
+ + + L + KD + FW+ + +SD+V D++ + +K+ D S
Sbjct: 605 EEFQCLSELGKYTKDDKFKVNISEFFWNIICNSDNVKEDLVNNCITKFCEMVKLWDLS-- 662
Query: 556 QERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYEPGQNLNS 602
R Q I L + E KS+ +P+LR K + + Q NS
Sbjct: 663 --RKHQFFIDLTKNLSENKSS----IPSLRLFKGLIKDQKDRQYYNS 703
>gi|403376520|gb|EJY88239.1| Ubiquitin carboxyl-terminal hydrolase family protein [Oxytricha
trifallax]
Length = 3224
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 125/287 (43%), Gaps = 21/287 (7%)
Query: 320 KNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVI 379
+ + I +IIKS R+ +ED K EI +L++ L L+ S ++ + ++N++I
Sbjct: 434 RREKIELIIKSIDNFQRRLISKEDREKLTEILKLEVCLMCLKSSYLERRIQGIRDLNQII 493
Query: 380 AGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKA 439
+ + + + + +W+ DN V IV Q V++ + I++ L++E
Sbjct: 494 RNLRMF---NSNNKAFNGQFLVQWMNDNGVFSIVFEHKRTHLQIVQRCDDIMKLLLQENM 550
Query: 440 LSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTE 499
LS ++ W+ + +++++ A+ F +H+ F+ K
Sbjct: 551 LSESLIEQFWSLTKADYKF---EIYKIINLCAFYFKQ---EHINFFFEQIRQIPVEKLAI 604
Query: 500 KLLELIRRLAEDDKDGVMADKVLNLFWS-LAHSDDVMTDIMEQALASH---LKILDYSCS 555
+ + + L + KD + FW+ + +SD+V D++ + +K+ D S
Sbjct: 605 EEFQCLSELGKYTKDDKFKVNISEFFWNIICNSDNVKEDLVNNCITKFCEMVKLWDLS-- 662
Query: 556 QERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYEPGQNLNS 602
R Q I L + E KS+ +P+LR K + + Q NS
Sbjct: 663 --RKHQFFIDLTKNLSENKSS----IPSLRLFKGLIKDQKDRQYYNS 703
>gi|345315290|ref|XP_003429607.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like, partial
[Ornithorhynchus anatinus]
Length = 122
Score = 58.2 bits (139), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 98 KILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTF 155
++LT AVH W IH IYN L++L+ +L QD P LL +LTM FNP N++H
Sbjct: 32 QLLTSSAVHKWGTEIHEGIYNMLMLLVDLVAQRLKQDPIPAGLLGVLTMAFNPDNEYHFK 91
Query: 156 NSNQQS 161
N + S
Sbjct: 92 NRMKTS 97
>gi|299115352|emb|CBN74174.1| ubiquitin domain-containing protein [Ectocarpus siliculosus]
Length = 3996
Score = 57.4 bits (137), Expect = 3e-05, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 112/270 (41%), Gaps = 22/270 (8%)
Query: 270 ESKNDAISVIIKSCKLLAARVPHQ---EDTEIVPEILENLTDEELKKEAKNESKNDAISV 326
E+ A+ + LLA RV V L+ +D EL+ ++ + +
Sbjct: 591 EALRSALVAVASVRPLLARRVARAVLGRTATAVSAALKGASDSELRGLSR-----ERLDG 645
Query: 327 IIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYP 386
I+ + + R + +++E +L + L+L K+ L + +A A P
Sbjct: 646 IVNGFREVLKRGHRSSEAYRRVEWLQLDLALKLYSCPFMERKLQGLKVLADAVAA-AETP 704
Query: 387 HRHPEEEW----LTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSL 442
+ LTP + +W+ DNN ++ + Q + + ++ FL +E+AL+
Sbjct: 705 ISSSISQGSSPALTPQELVEWLDDNNFVKALFAG---HTQLIRRSGDVVGFLCRERALTG 761
Query: 443 GDLDAVWAAQAGKHDAIVK-NVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKL 501
G +D +WAA G D + VHE+L + L+ L + + E
Sbjct: 762 GHVDIIWAAGGGGQDKDRRICVHEVLRPFLYQLDMALLERLVDKLR---VQPPDEVIEDT 818
Query: 502 LELIRRLAEDDKDGVMAD--KVLNLFWSLA 529
+ IR AE + G A ++L+L W++A
Sbjct: 819 VTFIRETAEATQQGGAAPAIRLLDLLWAMA 848
>gi|149035798|gb|EDL90479.1| rCG50423 [Rattus norvegicus]
Length = 138
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + L ++ +L+G +++W++ + + E+IA
Sbjct: 33 EITMNGFNLFKTFFENVNLCDHRL--KRQGAQLYVEKLELVGMDFIWKIAMESPDEEIAN 90
Query: 740 RAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLS 785
AI L+ S +L P+L+ HK FIA+C RL LS
Sbjct: 91 EAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLEVSKKNFNLS 137
>gi|345328983|ref|XP_001512478.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34
[Ornithorhynchus anatinus]
Length = 3631
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 405 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 457
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 458 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 514
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A SA+ +QT L ++
Sbjct: 515 DPVPLRHLLNLVSALHPSAHTEQTLYLASML 545
>gi|268532548|ref|XP_002631402.1| Hypothetical protein CBG03252 [Caenorhabditis briggsae]
Length = 1471
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 402 KWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVK 461
KW+++N VL+IVL ++ YVE+++ IL+++ E L+L D+ +W+ + G+ V+
Sbjct: 497 KWLEENKVLQIVLTGNMDHVVYVERIQPILQYMTPE--LTLDDMKFIWSLRKGRMGVSVE 554
Query: 462 NVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLA-EDDKDGVMADK 520
N ++++ ++ + Q++ L F+ S+ S + E + +A + ++D K
Sbjct: 555 NFNKIMEFISKSVTDEQIEWLIELFKKSFRSRETRLYEPIFNFAYIIAIQKERDDECKLK 614
Query: 521 VLNLFWSL 528
+ + W L
Sbjct: 615 ISKIMWEL 622
>gi|159155009|gb|AAI54517.1| LOC562779 protein [Danio rerio]
Length = 582
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ +NNV+E +
Sbjct: 344 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLINNNVVEHIF 396
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 397 GPNLHI-EIIKQCQVILNFLAAEGRLSTQHVDCIWAAAQLKH--CSRYIHDLFPSLIKNL 453
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L H+ SA+ +QT L ++
Sbjct: 454 DPVPLRHVLSLVSGLHPSAHTEQTLYLASML 484
>gi|334312779|ref|XP_001382154.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Monodelphis
domestica]
Length = 3531
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 303 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 355
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + + +H+L L +
Sbjct: 356 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKHCS--RYIHDLFPSLIKNL 412
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 413 DPVPLRHLLNLVSALHPSGHTEQTLYLASML 443
>gi|395508007|ref|XP_003758307.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Sarcophilus
harrisii]
Length = 3700
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 470 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 522
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + + +H+L L +
Sbjct: 523 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKHCS--RYIHDLFPSLIKNL 579
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 580 DPVPLRHLLNLVSALHPSGHTEQTLYLASML 610
>gi|327286194|ref|XP_003227816.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34-like [Anolis
carolinensis]
Length = 3602
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ +NNV+E +
Sbjct: 370 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLINNNVVEHIF 422
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 423 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 479
Query: 475 SPVQLDHLFVCFQASWTSANRKQT 498
PV L HL SA+ +QT
Sbjct: 480 DPVPLRHLLNLVSTLHPSAHTEQT 503
>gi|326664297|ref|XP_002660609.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Danio rerio]
Length = 3632
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ +NNV+E +
Sbjct: 344 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLINNNVVEHIF 396
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 397 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHVDCIWAAAQLKH--CSRYIHDLFPSLIKNL 453
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L H+ SA+ +QT L ++
Sbjct: 454 DPVPLRHVLSLVSGLHPSAHTEQTLYLASML 484
>gi|402890999|ref|XP_003908751.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34-like, partial
[Papio anubis]
Length = 747
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 312 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 364
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 365 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 421
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 422 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 452
>gi|308509982|ref|XP_003117174.1| hypothetical protein CRE_02304 [Caenorhabditis remanei]
gi|308242088|gb|EFO86040.1| hypothetical protein CRE_02304 [Caenorhabditis remanei]
Length = 3078
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 18/145 (12%)
Query: 402 KWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDL---------------D 446
KW+++N VL+IVL ++ YVE+++ IL+++ E L+L D+ +
Sbjct: 644 KWLEENKVLQIVLTGNMDHVVYVERIQPILQYMTPE--LTLDDMSKYIVYSFLRILNFTE 701
Query: 447 AVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIR 506
VW+ + G+ V+N ++++ ++ + Q++ L F+ S+ S + E +
Sbjct: 702 FVWSLRKGRMGVSVENFNKIMEFISKSVNNEQIEWLIELFKKSFRSRETRLYEPIFNFSY 761
Query: 507 RLA-EDDKDGVMADKVLNLFWSLAH 530
+A + D+D K+ N+ W L H
Sbjct: 762 TIAIQKDRDDECKLKICNIIWELIH 786
>gi|344291778|ref|XP_003417607.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Loxodonta
africana]
Length = 3682
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 453 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 505
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 506 GPNLHI-EIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 562
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 563 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 593
>gi|426335675|ref|XP_004029338.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Gorilla
gorilla gorilla]
Length = 3351
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 161 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 213
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 214 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 270
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 271 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 301
>gi|449496107|ref|XP_004175165.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 34 [Taeniopygia guttata]
Length = 3548
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 327 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 379
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 380 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 436
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL SA+ +QT L ++
Sbjct: 437 DPVPLRHLLNLVSTLHPSAHTEQTLYLASML 467
>gi|410214118|gb|JAA04278.1| ubiquitin specific peptidase 34 [Pan troglodytes]
gi|410302284|gb|JAA29742.1| ubiquitin specific peptidase 34 [Pan troglodytes]
Length = 3546
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 327 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 379
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 380 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 436
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 437 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 467
>gi|417407119|gb|JAA50185.1| Putative ubiquitin carboxyl-terminal hydrolase 34 [Desmodus
rotundus]
Length = 3530
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 323 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 375
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 376 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 432
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 433 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 463
>gi|291386736|ref|XP_002709737.1| PREDICTED: ubiquitin specific protease 34 [Oryctolagus cuniculus]
Length = 3567
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 348 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 400
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + + +H+L L +
Sbjct: 401 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKHCS--RYIHDLFPSLIKNL 457
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 458 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 488
>gi|397521873|ref|XP_003831009.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Pan paniscus]
Length = 3549
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 330 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 382
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 383 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 439
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 440 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 470
>gi|410353545|gb|JAA43376.1| ubiquitin specific peptidase 34 [Pan troglodytes]
gi|410353547|gb|JAA43377.1| ubiquitin specific peptidase 34 [Pan troglodytes]
Length = 3546
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 327 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 379
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 380 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 436
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 437 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 467
>gi|332813378|ref|XP_003309103.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Pan
troglodytes]
Length = 3549
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 330 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 382
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 383 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 439
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 440 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 470
>gi|296482550|tpg|DAA24665.1| TPA: ubiquitin specific peptidase 34-like [Bos taurus]
Length = 3610
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 390 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 442
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 443 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 499
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 500 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 530
>gi|110347427|ref|NP_055524.3| ubiquitin carboxyl-terminal hydrolase 34 [Homo sapiens]
gi|212276488|sp|Q70CQ2.2|UBP34_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 34; AltName:
Full=Deubiquitinating enzyme 34; AltName: Full=Ubiquitin
thioesterase 34; AltName:
Full=Ubiquitin-specific-processing protease 34
Length = 3546
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 327 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 379
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 380 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 436
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 437 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 467
>gi|395829831|ref|XP_003788044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Otolemur
garnettii]
Length = 3545
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 321 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 373
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 374 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 430
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 431 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 461
>gi|332226883|ref|XP_003262621.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Nomascus
leucogenys]
Length = 3553
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 334 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 386
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 387 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 443
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 444 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 474
>gi|431912662|gb|ELK14680.1| Ubiquitin carboxyl-terminal hydrolase 34, partial [Pteropus alecto]
Length = 3489
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 316 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 368
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 369 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 425
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 426 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 456
>gi|119620404|gb|EAW99998.1| ubiquitin specific peptidase 34 [Homo sapiens]
Length = 3558
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 339 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 391
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 392 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 448
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 449 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 479
>gi|395731788|ref|XP_002812043.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34, partial [Pongo
abelii]
Length = 3564
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 345 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 397
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 398 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 454
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 455 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 485
>gi|426226338|ref|XP_004007302.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Ovis aries]
Length = 3534
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 314 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 366
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 367 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 423
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 424 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 454
>gi|73970188|ref|XP_855134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Canis lupus
familiaris]
Length = 3542
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 323 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 375
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 376 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 432
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 433 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 463
>gi|40788033|emb|CAE51938.1| ubiquitin-specific proteinase 34 [Homo sapiens]
Length = 3395
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 176 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 228
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + + +H+L L +
Sbjct: 229 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKHCS--RYIHDLFPSLIKNL 285
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 286 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 316
>gi|383423177|gb|AFH34802.1| ubiquitin carboxyl-terminal hydrolase 34 [Macaca mulatta]
Length = 3546
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 327 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 379
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + + +H+L L +
Sbjct: 380 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKHCS--RYIHDLFPSLIKNL 436
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 437 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 467
>gi|380818350|gb|AFE81048.1| ubiquitin carboxyl-terminal hydrolase 34 [Macaca mulatta]
Length = 3546
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 327 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 379
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + + +H+L L +
Sbjct: 380 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKHCS--RYIHDLFPSLIKNL 436
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 437 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 467
>gi|348563482|ref|XP_003467536.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34-like [Cavia
porcellus]
Length = 3510
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 313 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 365
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 366 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 422
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 423 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 453
>gi|20521085|dbj|BAA25496.2| KIAA0570 protein [Homo sapiens]
Length = 3412
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 193 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 245
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + + +H+L L +
Sbjct: 246 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKHCS--RYIHDLFPSLIKNL 302
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 303 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 333
>gi|297266083|ref|XP_002799306.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34-like [Macaca
mulatta]
Length = 3489
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 347 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 399
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + + +H+L L +
Sbjct: 400 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKHCS--RYIHDLFPSLIKNL 456
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 457 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 487
>gi|358414471|ref|XP_613697.6| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 isoform 1 [Bos
taurus]
gi|359070122|ref|XP_002691468.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Bos taurus]
Length = 3547
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 327 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 379
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 380 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 436
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 437 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 467
>gi|301783585|ref|XP_002927208.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34-like, partial
[Ailuropoda melanoleuca]
Length = 3526
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 312 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 364
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 365 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 421
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 422 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 452
>gi|281354344|gb|EFB29928.1| hypothetical protein PANDA_016969 [Ailuropoda melanoleuca]
Length = 3527
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 313 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 365
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 366 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 422
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 423 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 453
>gi|194220701|ref|XP_001495735.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Equus
caballus]
Length = 3575
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 360 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 412
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 413 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 469
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 470 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 500
>gi|410954901|ref|XP_003984098.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Felis catus]
Length = 3459
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 332 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 384
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + + +H+L L +
Sbjct: 385 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKHCS--RYIHDLFPSLIKNL 441
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 442 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 472
>gi|444722660|gb|ELW63343.1| Ubiquitin carboxyl-terminal hydrolase 34 [Tupaia chinensis]
Length = 3139
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 353 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 405
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 406 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 462
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 463 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 493
>gi|313661462|ref|NP_001186345.1| ubiquitin carboxyl-terminal hydrolase 34 [Gallus gallus]
Length = 3549
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 326 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVIEHIF 378
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
++H + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 379 GPNIH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 435
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL SA+ +QT L ++
Sbjct: 436 DPVPLRHLLNLVSTLHPSAHTEQTLYLASML 466
>gi|351712632|gb|EHB15551.1| Ubiquitin carboxyl-terminal hydrolase 34, partial [Heterocephalus
glaber]
Length = 2855
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 111 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 163
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 164 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 220
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 221 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 251
>gi|350582357|ref|XP_003354853.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34-like [Sus
scrofa]
Length = 935
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 327 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 379
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 380 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 436
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A + +QT L ++
Sbjct: 437 DPVPLRHLLNLVSALEPGVHTEQTLYLASML 467
>gi|354503202|ref|XP_003513670.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34-like, partial
[Cricetulus griseus]
Length = 1491
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 329 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 381
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 382 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 438
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 439 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 469
>gi|410917592|ref|XP_003972270.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 34-like [Takifugu rubripes]
Length = 3588
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 339 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLIHNNVVEHIF 391
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 392 GPNLH-IEIIKQCQVILNFLAAESRLSTQHVDCIWAAAQLKH--CSRYIHDLFPSLIKNL 448
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L H+ SA+ +QT L ++
Sbjct: 449 DPVPLRHVLNLVSGLHPSAHTEQTLYLASML 479
>gi|148675936|gb|EDL07883.1| mCG140384 [Mus musculus]
Length = 3421
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 166 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 218
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 219 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 275
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A + +QT L ++
Sbjct: 276 DPVPLRHLLNLVSALEPGVHTEQTLYLASML 306
>gi|417515782|gb|JAA53700.1| ubiquitin carboxyl-terminal hydrolase 34 [Sus scrofa]
Length = 3547
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 327 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 379
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 380 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 436
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A + +QT L ++
Sbjct: 437 DPVPLRHLLNLVSALEPGVHTEQTLYLASML 467
>gi|301620378|ref|XP_002939554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34-like [Xenopus
(Silurana) tropicalis]
Length = 4555
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 400 MAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAI 459
+A W+ NNV+E + +LH + +++ + IL FL E LS +D +WAA KH
Sbjct: 383 LADWLISNNVVEHIFGPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--C 439
Query: 460 VKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
+ +H+L L + PV L HL SA+ +QT L ++
Sbjct: 440 SRYIHDLFPSLIKNLDPVPLRHLLNLVSGLHPSAHTEQTLYLASML 485
>gi|357527386|ref|NP_001177330.2| ubiquitin carboxyl-terminal hydrolase 34 [Mus musculus]
gi|212276489|sp|Q6ZQ93.3|UBP34_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 34; AltName:
Full=Deubiquitinating enzyme 34; AltName: Full=Ubiquitin
thioesterase 34; AltName:
Full=Ubiquitin-specific-processing protease 34
Length = 3582
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 327 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 379
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 380 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 436
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A + +QT L ++
Sbjct: 437 DPVPLRHLLNLVSALEPGVHTEQTLYLASML 467
>gi|332027970|gb|EGI68021.1| Ubiquitin carboxyl-terminal hydrolase 34 [Acromyrmex echinatior]
Length = 3445
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 355 IILRLLQISSFNGKMNALNEV--NKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEI 412
+ +RL ++ N + A NEV N+ +A V H +A W+ +NN++
Sbjct: 300 LTMRLAGVAQINAHITASNEVCNNEAVAEVEQVGHA-----------LAAWLTENNIIAH 348
Query: 413 VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAW 472
+ +LH + +++ IL FL E ++ D+D +W A KH + V++LLA L
Sbjct: 349 IFGPNLHV-EVIKQSHIILSFLAMEGRITSSDMDTMWQAAQLKHCG--RPVYDLLAPLVK 405
Query: 473 DFSPVQLDHLF 483
+P + HL+
Sbjct: 406 HLAPTPVLHLY 416
>gi|403260951|ref|XP_003922908.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Saimiri
boliviensis boliviensis]
Length = 3541
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 320 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 372
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 373 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 429
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
P L HL A S + +QT L ++
Sbjct: 430 DPAPLRHLLNLVSALEPSVHTEQTLYLASML 460
>gi|47219295|emb|CAG10924.1| unnamed protein product [Tetraodon nigroviridis]
Length = 613
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 29/153 (18%)
Query: 681 QLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAF 739
++T +G F+ FF++VN+ + +L K + L ++ DL G +++WR+ + + E+IA
Sbjct: 163 EITMNGFNLFKTFFENVNLCDHRL--KRQGTQLCVERLDLAGMDFIWRIAMESPDEEIAN 220
Query: 740 RAIDLLKEVS-THLGPKLQSSLT------------------------QFHKTFIAECLDR 774
AI L+ S T+L PK++ T HK FIA+C R
Sbjct: 221 EAIQLIITYSYTNLNPKMKKVSTPLCTRSCGGFYQVPKNPSAFQDSVSLHKKFIADCYKR 280
Query: 775 LRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
L A +G T + +A ++ TA A +
Sbjct: 281 LEAASSALG-GPTLTHAVTKATKMLTATAMPTV 312
>gi|149044802|gb|EDL97988.1| rCG23277 [Rattus norvegicus]
Length = 3384
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ N+V+E +
Sbjct: 128 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNSVIEHIF 180
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 181 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 237
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 238 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 268
>gi|403420571|ref|NP_001258125.1| ubiquitin carboxyl-terminal hydrolase 34 [Rattus norvegicus]
Length = 3583
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ N+V+E +
Sbjct: 327 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNSVIEHIF 379
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 380 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 436
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 437 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 467
>gi|348544969|ref|XP_003459953.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34, partial
[Oreochromis niloticus]
Length = 3606
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 316 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLIHNNVVEHIF 368
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 369 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 425
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L H+ S + +QT L ++
Sbjct: 426 DPVPLRHVLNLVSGLHPSTHTEQTLYLASML 456
>gi|74221904|dbj|BAE28668.1| unnamed protein product [Mus musculus]
Length = 415
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 103 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 155
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 156 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 212
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A + +QT L ++
Sbjct: 213 DPVPLRHLLNLVSALEPGVHTEQTLYLASML 243
>gi|350418847|ref|XP_003491987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34-like [Bombus
impatiens]
Length = 3425
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 355 IILRLLQISSFNGKMNALNEV--NKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEI 412
+ +RL I+ N + A NE+ ++ +A V H +A W+ +NN++
Sbjct: 297 LTMRLAGIAQINAHITAFNELCNSETVAEVEQVGHA-----------LAAWLTENNIIAH 345
Query: 413 VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAW 472
+ +LH + +++ +L FL E ++ D+D +W A KH + V++LLA L
Sbjct: 346 IFGPNLHV-EVIKQSHIVLSFLAMEGRITCSDMDTMWQAAQLKHCG--RPVYDLLAPLVK 402
Query: 473 DFSPVQLDHLF 483
+P + HL+
Sbjct: 403 HLAPTPVLHLY 413
>gi|125634296|gb|ABN48402.1| USP9Y [Gorilla gorilla]
Length = 38
Score = 52.0 bits (123), Expect = 0.002, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 28/38 (73%)
Query: 188 GWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALI 225
GWLVDLIN FG + GFQIL +RF N S L + +I ALI
Sbjct: 1 GWLVDLINKFGILNGFQILHDRFFNGSALNVQIIAALI 38
>gi|383859437|ref|XP_003705201.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34 [Megachile
rotundata]
Length = 3440
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 355 IILRLLQISSFNGKMNALNEV--NKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEI 412
+ +RL I+ N + A NE+ ++ +A V H +A W+ +NN++
Sbjct: 296 LTMRLAGIAQINAHITAFNELCNSETVAEVEQVGHA-----------LAAWLTENNIIAH 344
Query: 413 VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAW 472
+ +LH + +++ +L FL E ++ D+D +W A KH + V++LLA L
Sbjct: 345 IFGPNLHV-EVIKQSHIVLSFLAMEGRITCSDMDTMWQAAQLKHCG--RPVYDLLAPLVK 401
Query: 473 DFSPVQLDHLF 483
+P + HL+
Sbjct: 402 HLAPTPVLHLY 412
>gi|340713885|ref|XP_003395465.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34-like [Bombus
terrestris]
Length = 3425
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 355 IILRLLQISSFNGKMNALNEV--NKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEI 412
+ +RL I+ N + A NE+ ++ +A V H +A W+ +NN++
Sbjct: 297 LTMRLAGIAQINAHITAFNELCNSETVAEVEQVGHA-----------LAAWLTENNIIAH 345
Query: 413 VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAW 472
+ +LH + +++ +L FL E ++ D+D +W A KH + V++LLA L
Sbjct: 346 IFGPNLHV-EVIKQSHIVLSFLAMEGRITCSDMDTMWQAAQLKHCG--RPVYDLLAPLVK 402
Query: 473 DFSPVQLDHLF 483
+P + HL+
Sbjct: 403 HLAPTPVLHLY 413
>gi|380025402|ref|XP_003696463.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 34-like [Apis florea]
Length = 2944
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 355 IILRLLQISSFNGKMNALNEV--NKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEI 412
+ +RL I+ N + A NE+ ++ +A V H +A W+ +NN++
Sbjct: 315 LTMRLAGIAQINAHITAFNELCNSETVAEVEQVGHA-----------LAAWLTENNIIAH 363
Query: 413 VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAW 472
+ +LH + +++ +L FL E ++ D+D +W A KH + V++LLA L
Sbjct: 364 IFGPNLH-VEVIKQSHIVLSFLAMEGRITCSDMDTMWQAAQLKHCG--RPVYDLLAPLVK 420
Query: 473 DFSPVQLDHLF 483
+P + HL+
Sbjct: 421 HLAPTPVLHLY 431
>gi|390474441|ref|XP_002807583.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 34, partial [Callithrix jacchus]
Length = 3578
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ +NV+E +
Sbjct: 348 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISSNVVEHIF 400
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + + +H+L L +
Sbjct: 401 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKHCS--RYIHDLFPSLIKNL 457
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
P L HL A S + +QT L ++
Sbjct: 458 DPAPLRHLLNLVSALEPSVHTEQTLYLASML 488
>gi|47210545|emb|CAF90684.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4056
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 462 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLIHNNVVEHIF 514
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 515 GPNLHI-----ECQVILNFLAAESRLSTQHVDCIWAAAQLKH--CSRYIHDLFPSLIKNL 567
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L H+ SA+ +QT L ++
Sbjct: 568 DPVPLRHVLNLVSGLHPSAHTEQTLYLASML 598
>gi|345495851|ref|XP_003427586.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 34-like [Nasonia vitripennis]
Length = 3478
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 355 IILRLLQISSFNGKMNALNEV--NKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEI 412
+ +RL I+ N + A NE+ ++ +A + H +A W+ +NN++
Sbjct: 251 LTMRLAGIAQINSHITAFNELCNSETVAEIEQVGHA-----------LAMWLTENNIIAH 299
Query: 413 VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAW 472
+ +LH + +++ +L FL E +S D+D +W A KH A + V++LLA L
Sbjct: 300 IFGPNLHV-EVIKQSHIVLSFLAMEGRISSMDMDIMWQAAQLKHCA--RPVYDLLAPLVK 356
Query: 473 DFSPVQLDHLF 483
+P + HL+
Sbjct: 357 HLAPTPVLHLY 367
>gi|322786719|gb|EFZ13088.1| hypothetical protein SINV_05405 [Solenopsis invicta]
Length = 3374
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 355 IILRLLQISSFNGKMNALNEV--NKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEI 412
+ +RL ++ N + A NE+ ++ +A V H +A W+ +NN++
Sbjct: 229 LTMRLAGVAQINAHITASNELCNSETVAEVEQVGHA-----------LAAWLTENNIIAH 277
Query: 413 VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAW 472
+ +LH + +++ IL FL E ++ D+D +W A KH + V++LLA L
Sbjct: 278 IFGPNLHV-EVIKQSHIILSFLAMEGRITSSDMDTMWQAAQLKHCG--RPVYDLLAPLVK 334
Query: 473 DFSPVQLDHLF 483
+P + HL+
Sbjct: 335 HLAPTPVLHLY 345
>gi|307187156|gb|EFN72399.1| Ubiquitin carboxyl-terminal hydrolase 34 [Camponotus floridanus]
Length = 3468
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 355 IILRLLQISSFNGKMNALNEV--NKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEI 412
+ +RL ++ N + A NE+ ++ +A V H +A W+ +NN++
Sbjct: 296 LTMRLAGVAQINAHITASNELCNSETVAEVEQVGHA-----------LAAWLTENNIIAH 344
Query: 413 VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAW 472
+ +LH + +++ IL FL E ++ D+D +W A KH + V++LLA L
Sbjct: 345 IFGPNLHV-EVIKQSHIILSFLAMEGRITSSDMDTMWQAAQLKHCG--RPVYDLLAPLVK 401
Query: 473 DFSPVQLDHLF 483
+P + HL+
Sbjct: 402 HLAPTPVLHLY 412
>gi|270010424|gb|EFA06872.1| hypothetical protein TcasGA2_TC009817 [Tribolium castaneum]
Length = 3281
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Query: 343 DTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVA--YYPHRHPEEEWLTPDRM 400
DT +I L + + S+ ++ + ++N I +A PE E P M
Sbjct: 256 DTPVAFDIDGLDLAFKYFTSSTLTMRLAGITQINNQIGVLAEICVGESLPEAE-AAPRHM 314
Query: 401 AKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIV 460
A W+ +NN++ + +LH + +++ IL FL E ++ +D +WAA KH +
Sbjct: 315 ADWLINNNIISHIFGPNLHV-EVIKQSHIILNFLAMEGRITCEHMDIIWAAAQLKHCS-- 371
Query: 461 KNVHELLAKLAWDFSPVQLDHLF 483
K VH+LL L + HL+
Sbjct: 372 KPVHDLLPGLVKHLAASPTLHLY 394
>gi|380807693|gb|AFE75722.1| putative ubiquitin carboxyl-terminal hydrolase FAF-Y, partial
[Macaca mulatta]
Length = 88
Score = 48.9 bits (115), Expect = 0.011, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKW 818
P+A+QIW LA+ A++ CDREACFKW
Sbjct: 63 PQAKQIWKCLAENAVYLCDREACFKW 88
>gi|440792763|gb|ELR13971.1| ubiquitin domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 2870
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 122/291 (41%), Gaps = 40/291 (13%)
Query: 194 INLFGSMGGFQILLERFQN-KSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVP 252
I FG GF + + + + K L I L++P ++ EYL L + K + +V
Sbjct: 175 ITFFGKKDGFNLFISKLADEKRKLDANAIKWLLKPIVKLLEYLPLRLVRKIVEQLRHVVF 234
Query: 253 EILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELK 312
L ++DE+LK + + I S + L V +E T++V + EL
Sbjct: 235 SRLLEMSDEDLKGVNRK-----VLGDISASMESLLRVVAPKETTQLVDKF-------EL- 281
Query: 313 KEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNAL 372
AI+ + L R+ D + +++ +L+ + +M
Sbjct: 282 ----------AIAYKMFMSPYLEKRLMGLSDIKRYVDL--------VLRKEDYQQRMRQT 323
Query: 373 NEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILR 432
+ ++ A W+ +M +W+ + ++E + S+HQ + +++ I +
Sbjct: 324 DRASQGNLPAAI-------NVWIDSKQMVEWLNNQKIMEQIYVHSIHQ-ELLKRAVDIAK 375
Query: 433 FLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLF 483
F + + +D +W+A GKH++I ++ LA+L+ +++LF
Sbjct: 376 FFAIQNQIQNHHIDLMWSATIGKHESICHIIYNSLAELSTVLPAEAVEYLF 426
>gi|301095072|ref|XP_002896638.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262108868|gb|EEY66920.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 2442
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 88/469 (18%), Positives = 182/469 (38%), Gaps = 76/469 (16%)
Query: 98 KILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNS 157
+IL ++ S +H + Q LE + L Q L L + + +F+ ++
Sbjct: 296 QILLGKSLESGVERVHKFL----QWTLENVKKGLKQGDVSRLSCLARILDGHRRFYLYHG 351
Query: 158 NQQSISVPVNSNIADDE---IFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
S I+D I R +Y R +L +L +G + GF +LL+ Q +
Sbjct: 352 TSNDTSETETREISDQTRRFIVRRSSEY--TSRYFLHNL-EYWGQLDGFSVLLDVLQTDT 408
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
+ V+ ++R V ++L + YF + V +++L + ++ D
Sbjct: 409 SF--EVLQCVLRTLYDVKDHLNSEFLGVYFPKLTNSVCTFMQHLPSADFYALSR-----D 461
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
++ +++ +LL ++ H K +
Sbjct: 462 SLLEVVQVMELLLVKIEHG----------------------------------AKQPTAM 487
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGV---AYYPHRHPE 391
V +E ++++I RL+I +R Q +S ++ L E+ +I + P
Sbjct: 488 TEHVSLREICEQRVQILRLEISMRFFQSTSLEKRIYGLTEIVVIITRLYNDQIQEQTDPT 547
Query: 392 EEWL--TPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVW 449
L T D + W+ D +++ +L + +H + +++ + +F+ + + L +D VW
Sbjct: 548 AASLLATLDYLVNWMHDKRLMQELLGEKMH-VELIKRSTSLFQFVSELEVLPTEWIDLVW 606
Query: 450 A---AQAG----------KHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRK 496
+ A+A +H+A +H+LL ++A L HL ++ +
Sbjct: 607 SCYHAEADDAQESRPVQRRHEAFRSTIHDLLLEMATFMENPSLLHLVRRIESVKAKLDSN 666
Query: 497 QTEKLLELIRR--LAEDDKDGVMADKVLNLFWS----LAHSDDVMTDIM 539
Q L + R LA +D + ++L WS S+D +I+
Sbjct: 667 QLGLLAAIAARRFLAFEDARTSLRQRILMHLWSTVLPYVRSEDFQDEIL 715
>gi|118364429|ref|XP_001015436.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89297203|gb|EAR95191.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 3041
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 72/153 (47%), Gaps = 24/153 (15%)
Query: 341 QEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVA----------------- 383
Q+ +K+++ L + L+LL N K+ LN+++++IA +
Sbjct: 598 QDMYLKRIDEMDLNLALKLLSSQYLNKKIQGLNDISEIIAEIKQNDSFQNGSNNDDIGFR 657
Query: 384 ----YYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKA 439
YY + + + P +W+ N +++ +L DS+H + V + +I+RF+ K
Sbjct: 658 NNSEYYSDQMNDRRF-NPKEFTEWVIKNQIIDHLLGDSMH-VEIVRRCHEIIRFMCFCKQ 715
Query: 440 LSLGDLDAVW-AAQAGKHDAIVKNVHELLAKLA 471
+ +D +W + + KH+ IV + E++ +
Sbjct: 716 FPVELIDTIWNSCGSDKHEVIVSAIFEMIISIT 748
>gi|241618039|ref|XP_002408284.1| conserved hypothetical protein [Ixodes scapularis]
gi|215502951|gb|EEC12445.1| conserved hypothetical protein [Ixodes scapularis]
Length = 218
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIEL-----CKTNSDVDSEPCQRFFR 89
FP L L+ ++ +W +P ++ L + AA L C++N+D C+ F
Sbjct: 99 FPTTNLYELEQRVFLDQWSIPYKKDESLAKCLVAATNLAREGQCESNAD-----CKNFME 153
Query: 90 EGLSISFTK------ILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFP---LLD 140
+ SF K +LT AV +W ++ +YN L+EL+V +L P L +
Sbjct: 154 SCMPESFKKASFSLFLLTTLAVRNWTPDVQEGVYNMLMLLIELVVERLSHPPLPEKLLSN 213
Query: 141 ILTMV 145
+L+MV
Sbjct: 214 VLSMV 218
>gi|403358649|gb|EJY78977.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 3463
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 147/331 (44%), Gaps = 38/331 (11%)
Query: 189 WLVDLINLFGSMGGFQILLE--RFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMP 246
+ V IN+F GF LL+ +F N T + H + P +LK+
Sbjct: 233 FYVHNINMFSKYKGFDQLLKIMQFANNQT-------------SESHNQVKRP-MLKFMAM 278
Query: 247 ILEIVPEILENLTDEELKKEAKNESKNDAI-SVIIKSCKLLAARVPHQEDTEIVPEILEN 305
IL ++ + + D+ A D I +I C R +++D +E+
Sbjct: 279 ILNMMTSMRQTFRDQFWS--AYMPQMRDLIHDYVINRCSSEDLRTINKKDMTYFINQMES 336
Query: 306 LTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQI-SS 364
+ D K E + + + I ++ +L AR+ Q +++ I +I ++ Q +S
Sbjct: 337 MLD---SNPMKQEDRIEKVFKISETMELHLARICLQMPVLEKKLIGHNILINKIFQARNS 393
Query: 365 FNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYV 424
N + N+ + N+V + W+ +++ +W+ + + ++V DSLH + +
Sbjct: 394 SNAQQNS--QANQV----------NINSRWINVEKLIEWLDNEKIFDLVFGDSLH-SEVI 440
Query: 425 EKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFV 484
+K +L+FL + + +LD +W KH+A + + L +A S L ++F
Sbjct: 441 KKSYPLLQFLYQNDRIREKELDKIWECGTKKHEAYKVAILKALTFIATKASLKDLTYIFK 500
Query: 485 CFQASWTSANRKQTEKLLELI-RRLA-EDDK 513
++ S K + +L+++I ++LA E+DK
Sbjct: 501 KVKSLQMSELDKFSLQLVKVISKKLAGEEDK 531
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 680 RQLTESGLKCFEKFFKSVNIGEGKLVLKVK-KRSLLLDNADLIGAEYLWRVITNAGEDIA 738
R +TE+ +CFE+FF +N G+++ + + + LIG E LW + A +
Sbjct: 1233 RFITETMYECFERFFIYINEQYGQIITNTAFETAFEVYETKLIGVEALWEITLCARNNRV 1292
Query: 739 F-RAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
+ ++ + L ++ + P L L + + + C+D+++ + I
Sbjct: 1293 YEKSAEFLHKLYKKMSPSLVDRLNEIKEDLLQTCMDQIKCGLNEI 1337
>gi|145512215|ref|XP_001442024.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409296|emb|CAK74627.1| unnamed protein product [Paramecium tetraurelia]
Length = 2396
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 122/289 (42%), Gaps = 25/289 (8%)
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILE-------NLTDEELKKEAKNESKNDAISVI 327
A+ II + + L+ P QE + + E NLT +++K ++ D I I
Sbjct: 326 AMQKIILTQQYLSQYFPPQEQSNMAKRTFEWFQLRVANLTIQDIK-----DTDIDQIREI 380
Query: 328 IKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPH 387
++ + + ++ K ++ +L++ L+ L+ + ++ L+E+ + + +
Sbjct: 381 VQDLQYYFLKGYSLDNLNKLVDDLQLQMALKFLKSTFLEKRVKGLSEIKDFTEKLKFETN 440
Query: 388 RHPE-EEWLTPDRMAKWIKDNNVLE-IVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDL 445
+ + D + KWI N +L+ +L DS+H P+ +++ + FL K + +
Sbjct: 441 SQIKIKNSTNKDELIKWITQNRILDYTLLGDSVH-PELIKRSSDVAIFLCKNQVFPNDYV 499
Query: 446 DAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV-QLDHLFVCFQASWTSANRKQTEKLLEL 504
D +W KH+ ++E + SPV Q + + K E ++ +
Sbjct: 500 DKIWLNNYDKHETTQLALYEFFKAI----SPVLQFQGIENLYNHILNIPYNKYNENIVSM 555
Query: 505 IRRLAEDDKDGVMADKVLNL-----FWSLAHSDDVMTDIMEQALASHLK 548
IR E ++ L L F + +++ D +Q + SH++
Sbjct: 556 IRTFTEAALSQKFHEQQLQLKPDRRFMTFNQLWELLQDRDDQLVGSHIQ 604
>gi|402583667|gb|EJW77611.1| hypothetical protein WUBG_11479, partial [Wuchereria bancrofti]
Length = 221
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 678 PDRQLTESGLKCFEKFFKSVNIGEGKLVLKVKKRS-LLLDNADLIGAEYLWRVITNAGED 736
P L E G CF+ F+ ++N KL + S L+ + DL G +YLW ++ A +
Sbjct: 55 PVELLNEEGFSCFKTFWIAINKRHSKLFQPTEGMSHYLMCDFDLEGMDYLWEIMLQARAE 114
Query: 737 IAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
++ AI L E+ + + S +T + +C L+ +D +
Sbjct: 115 VSHLAISLWVEILANPHTAVISDFAHLIQTVVNKCFVMLKTKHDDL 160
Score = 39.7 bits (91), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVL 843
P+A ++W AL +++F +R F+ F M D+ D+DPK + F +L
Sbjct: 3 PQANELWDALIVQSVFEYERTYGFQLFGT-MQDQQDIDPKALDQLFTSRIL 52
>gi|307198023|gb|EFN79083.1| Ubiquitin carboxyl-terminal hydrolase 34 [Harpegnathos saltator]
Length = 3472
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 355 IILRLLQISSFNGKMNALNEV--NKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEI 412
+ +RL ++ N + A NE+ ++ +A V H +A W+ +NN++
Sbjct: 296 LTMRLAGVAQINAHITASNELCNSETVAEVEQVGHA-----------LAAWLTENNIIAH 344
Query: 413 VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAW 472
+ +LH + +++ IL FL E ++ D+D +W A KH + V++LLA L
Sbjct: 345 IFGPNLHV-EVIKQSHIILSFLAMEGRITSSDMDTMWQAAQLKHCG--RPVYDLLAPLVK 401
Query: 473 DFSPVQLDHLF 483
+ + HL+
Sbjct: 402 HLASTPVLHLY 412
>gi|355727956|gb|AES09366.1| ubiquitin specific peptidase 24 [Mustela putorius furo]
Length = 514
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 719 DLIGAEYLWRV-ITNAGEDIAFRAIDLLKEVS-THLGPKLQSSLTQFHKTFIAECLDRLR 776
+LIG +++W++ + + E+IA AI L+ S +L P+L+ HK FIA+C RL
Sbjct: 1 ELIGMDFIWKIAMESPDEEIANEAIQLIINYSYINLNPRLKKDSVSLHKKFIADCYTRLE 60
Query: 777 AHYDTIG---LSHTYRPILPEARQIWTALAQEAI 807
A +G L+H + A ++ TA A +
Sbjct: 61 AASSALGGPTLTHA----VTRATKMLTATAMPTV 90
>gi|405974965|gb|EKC39571.1| Ubiquitin carboxyl-terminal hydrolase 34 [Crassostrea gigas]
Length = 1473
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 122/296 (41%), Gaps = 65/296 (21%)
Query: 189 WLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFA--LIRPFGQVHEYLTLPTILKYFMP 246
+L+ + F G L + F + T+P FA LI + ++ +PT+++Y +P
Sbjct: 200 FLLRNVCFFCDSNGIGALKQCFDKATPDTLPFTFAHILITLIANLRLWMNIPTVMQYIVP 259
Query: 247 ILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENL 306
+ +V + L+D++L + A N + + + +K E LE
Sbjct: 260 LRTVVIRYMCKLSDKDL-RMAGNRNMTELMWAAVK-------------------EPLE-- 297
Query: 307 TDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFN 366
T + KE + ++ +C L +RL I+ N
Sbjct: 298 THFQFDKEGLD------LAFKYFTCSTLT---------------------IRLAGIAQIN 330
Query: 367 GKMNALNEV--NKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYV 424
++N NE N+ + Y R ++++W+ DN ++E + +LH + +
Sbjct: 331 NQINLYNESCNNETLMDTESYVER-------VGHQLSQWLLDNKIIEHIFGPNLH-IEII 382
Query: 425 EKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLA--WDFSPVQ 478
++ + IL L E ++ +D +WA+ KH + K V+++L L + PVQ
Sbjct: 383 KQSQLILNLLAVEGKITNDHIDCIWASSQLKHCS--KQVYDILIPLIKNLELQPVQ 436
>gi|357622215|gb|EHJ73779.1| putative ubiquitin specific protease 34 [Danaus plexippus]
Length = 3309
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N + A NE+ A P E L ++A W+ +NN++E +
Sbjct: 328 LTMRLAGVAQINAHIAAHNEL------CAGEPAADAE---LAGQQLATWLTNNNIIEHLF 378
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ IL+FL E ++ ++ VWAA KH + V++LL
Sbjct: 379 GPNLHV-EVIKQSHMILKFLAVEGRVTSEHVELVWAAAQLKHCG--RQVYDLLPGFIRAL 435
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 436 APKPCSHLY 444
>gi|390354713|ref|XP_003728390.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 34-like
[Strongylocentrotus purpuratus]
Length = 589
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL + +++ NEV Y+ + E + + + KW+ + ++E +
Sbjct: 392 LTMRLTGLGQITNQIHMFNEV--------YHNESVTDVENMGSE-LTKWLLEREIVEHIF 442
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
++H + +++ + IL FL + AL+L LD VWAA KH + VH+L L
Sbjct: 443 GPNMH-VEIIKQCQVILNFLASDGALTLKHLDTVWAAAQLKHSG--RYVHDLFPHLIKHL 499
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDD 512
L HL S + +QT L ++I + D+
Sbjct: 500 ESRPLLHLMQLVSKLHPSEHTEQTLYLSQVITKCVWDN 537
>gi|325186667|emb|CCA21216.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 2524
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 93/508 (18%), Positives = 191/508 (37%), Gaps = 105/508 (20%)
Query: 138 LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLF 197
LL+ L+++ + F+T S Q I + S + F ++Y+
Sbjct: 145 LLESLSVILDDSQPFYTLYS--QVIELHDRSEQQHESAFFENLEYW-------------- 188
Query: 198 GSMGGFQILLERFQNKSTL---------------------TIPVIFALIRPFGQVHEYLT 236
+GGFQ++L S L +P IF R V E++T
Sbjct: 189 SELGGFQLILYVLSGSSPLPDTEQVDLCMGLDERPPVPVKALPYIF---RTLYTVQEHVT 245
Query: 237 LPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDT 296
++YF+P+++ + +L+ + N + + +++ + RV
Sbjct: 246 DAFAIQYFVPLVKATTAYVNSLSAIDF-----NCLSRECVMELLQILEFWLCRV-----M 295
Query: 297 EIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKII 356
EI P + D + KE + D I + L + E+ + I RL
Sbjct: 296 EISPSGRKEAKDTKRAKEETPKDFQDEIDLG------LLESPTYCEEALLAFTILRLDFY 349
Query: 357 LRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRD 416
R + S +++ L +++ + + E + WI+ +++ + D
Sbjct: 350 RRFILSVSLERQLSGLTDLSSFLVTTTKASSKLKE-------GIVSWIESRDLILSLFSD 402
Query: 417 SLHQPQYVEKLEKILRFLIKEKALSLGDLDAVW----------------AAQAGKHDAIV 460
S+H + +++ L+FLI +ALS L +W ++Q GK ++
Sbjct: 403 SIHD-EVLKRCMPTLKFLIDMEALSQPKLQQIWKKYRDSATCGVVHSIRSSQTGKEES-- 459
Query: 461 KNVHELLAKLAWDFSPVQLDHLFVCFQASWTSAN---RKQTEKLLELIRRLAEDDKDGVM 517
+ ++EL+ ++ S L + + + + + Q ++ +I R AE +
Sbjct: 460 EPLYELILEICSQGSAQVLRDMVYLIRPNTLQPHVRLQAQVAEICSVIARRAEKFNLKDL 519
Query: 518 ADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQE-RDKQKTIWL--------QT 568
D++L W + M + E ILD + +D + WL +T
Sbjct: 520 VDEILGYLWGNRRLSNFMEKLCE--------ILDGQLQKSTKDGKTKDWLKRTLASFFET 571
Query: 569 C---IEEFKSNPKWVVPALRQIKDICCL 593
C I+ F+S P + + + ++ + L
Sbjct: 572 CWDHIKMFQSQPNYQIELIEAMRALTAL 599
>gi|348672888|gb|EGZ12708.1| hypothetical protein PHYSODRAFT_518018 [Phytophthora sojae]
Length = 2716
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 67/348 (19%), Positives = 140/348 (40%), Gaps = 67/348 (19%)
Query: 194 INLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPE 253
+ +G++GGF LLE +S+ + + ++R V ++LT + YF +++ V
Sbjct: 397 LEYWGTVGGFSALLEVL--RSSASFEALQCVLRLLYDVKDHLTTEFLTLYFPELIDAVRA 454
Query: 254 ILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKK 313
++ +L E ++ D++ +++ +L+ ++ H D + TD E +
Sbjct: 455 LITSLQPGEFYALSR-----DSLLEVVQVMELILVKIQHDSDAAA------DSTDSERQ- 502
Query: 314 EAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALN 373
C+ +++++ RL+I LR Q +S ++ L
Sbjct: 503 ----------------VCE-------------QRVQLLRLEISLRFFQSNSLEKRIYGLT 533
Query: 374 EVNKVIAGVAYYPHRHPEEEWLTPDRMAK------WIKDNNVLEIVLRDSLHQPQYVEKL 427
E+ +I + Y + E AK W+ D +++ +L + +H + V++
Sbjct: 534 EIVVIITRL-YNEQIQEQVEPTAASLYAKLKFLVDWMHDKRLMQELLGEKMH-VELVKRS 591
Query: 428 EKILRFLIKEKALSLGDLDAVWAA---------------QAGKHDAIVKNVHELLAKLAW 472
+ +F + + L +D VW+ +H+A +H+LL ++A
Sbjct: 592 TSLFQFTSELERLPSEWIDLVWSCYHAEADADAEEESRPAQRRHEAFRATIHDLLLEMAT 651
Query: 473 DFSPVQLDHLFVCFQASWTSANRKQTEKLLELI-RRLAEDDKDGVMAD 519
L+HL +A + Q L + R+L D DG D
Sbjct: 652 FMELPSLNHLVQRIEAVKAKLDLNQLGLLAAIAGRKLLADIPDGSPED 699
>gi|145521777|ref|XP_001446738.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414227|emb|CAK79341.1| unnamed protein product [Paramecium tetraurelia]
Length = 2379
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 124/295 (42%), Gaps = 37/295 (12%)
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILE-------NLTDEELKKEAKNESKNDAISVI 327
A++ I+ + + ++ P QE + + LE NLT +++K + + +A+ +
Sbjct: 309 AMTKIVLTQQYMSQYFPLQEQGNMARKTLEWFQFRVANLTVQDIKDTDIDLIRENALEM- 367
Query: 328 IKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPH 387
+ + QE K ++ +L++ L+ L+ + ++ L+E+ + +
Sbjct: 368 ----QYYFLKGYSQEQLNKLVDEIQLQMALKFLKSNFLEKRVKGLSEIKDFTEKLKFETS 423
Query: 388 RHPE-EEWLTPDRMAKWIKDNNVLEI-VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDL 445
+ + + + + KWI N +L+ VL DS+H P+ +++ + FL K +A +
Sbjct: 424 SQIKLKTSINKEELIKWIVYNRILDFTVLGDSVH-PELIKRASDVAFFLCKNQAFQPDYV 482
Query: 446 DAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSAN-------RKQT 498
D +W KH+ ++E + SPV + FQ N K
Sbjct: 483 DKIWLNNYDKHETTQLALYEFFKAI----SPV------LSFQGIEKLYNHILAIPYNKYN 532
Query: 499 EKLLELIRRLAEDDKDGVMADKVLNL-----FWSLAHSDDVMTDIMEQALASHLK 548
E ++ +IR E ++ L L F + D+ D + ++SH++
Sbjct: 533 ENIVSMIRTFTEAALSQKFHEQQLQLKPDKRFMTFNQLWDLFQDREDSLVSSHIQ 587
>gi|449670838|ref|XP_002156309.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Hydra
magnipapillata]
Length = 1504
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 680 RQLTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNA-GEDIA 738
+ L +SG CF+ +F+ VN E KL+ S+L++ DLIG YL ++I + + IA
Sbjct: 26 QMLDKSGFSCFKAYFEDVNNDERKLL--KNGPSILVEKQDLIGLSYLLQLILESPYQSIA 83
Query: 739 FRAIDLLKEVST-HLGPKLQS-SLTQFHKTFIAEC 771
A VS L PK++ + H+ FI EC
Sbjct: 84 DEASQYFINVSYLLLAPKMKKMDIRVIHQKFICEC 118
>gi|145522826|ref|XP_001447257.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414757|emb|CAK79860.1| unnamed protein product [Paramecium tetraurelia]
Length = 783
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
A+ I+ + K L+ E ++ T E L+ N S D I K L
Sbjct: 309 AMQRIVLTQKYLSQYFQSSEQAQMAKR-----TFEWLQNRVNNMSVQDIKDTDIDQVKDL 363
Query: 335 AARVPHQ--------EDTVKQL-EIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYY 385
+ HQ ED + +L + +L++ L+ L+ S ++ ++E+ + +
Sbjct: 364 TS--DHQYYFQKGFTEDQLNRLTDEIQLQLSLKFLKSSFLEKRVKGISEIKDFTEKLKFD 421
Query: 386 PHRHPE-EEWLTPDRMAKWIKDNNVL-EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLG 443
+ + ++ D + KWI+ N +L + +L DS+H P+ +++ + FL + +A +
Sbjct: 422 QQTNLKFRSSISKDDLIKWIQQNKILDQTLLGDSVH-PELIKRSSDVAVFLCRNQAFEVD 480
Query: 444 DLDAVWAAQAGKHDAIVKNVHELLAKLA 471
+D +W KH+ ++E ++
Sbjct: 481 YIDKIWTNNYDKHETTQLALYEFFKTVS 508
>gi|325185718|emb|CCA20199.1| predicted protein putative [Albugo laibachii Nc14]
Length = 3023
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 17/187 (9%)
Query: 398 DRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHD 457
+R+ W++ N+L + D +H+ + V + ++ FL + K L LD +W A + K
Sbjct: 538 ERLIDWVQQKNILVEIFGDRVHR-EVVSRSTVLVLFLAEAKQLDTASLDLIWRAGSRKDL 596
Query: 458 AIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSA--NRKQTEKLLELIRRLAEDD--- 512
I +H+LL + L HL +++ R+ LL + +L +D
Sbjct: 597 IIASEIHQLLVAITPHLDDDLLLHLLDTTHTAFSEMRDTRESLRSLLVFVEQLLSNDFFS 656
Query: 513 -KDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQ----KTIWLQ 567
+ G + L L WS + + + L SH + D + R ++ + +L
Sbjct: 657 ERSGNVISSTLRLLWS------IQVRCLTKTLGSHPSLCDILQQELRAQRNEDLRNQFLN 710
Query: 568 TCIEEFK 574
CI K
Sbjct: 711 DCINGIK 717
>gi|115742247|ref|XP_001185441.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like, partial
[Strongylocentrotus purpuratus]
Length = 163
Score = 43.5 bits (101), Expect = 0.57, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 714 LLDNADLIGAEYLWR-VITNAGEDIAFRAIDLLKEVS-THLGPKLQSSLTQFHKTFIAEC 771
+++ DL G +++W+ V+ + E IA AI + +S T+L +L+ + HK FI+EC
Sbjct: 1 IVEKLDLFGLDFMWKMVLESTNESIAEMAIRQIMSMSYTNLAQRLKKDVLDLHKHFISEC 60
Query: 772 LDRLRAHY 779
RL Y
Sbjct: 61 YKRLELAY 68
>gi|198449794|ref|XP_002136962.1| GA26951, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198130759|gb|EDY67520.1| GA26951, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 3931
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S N +N NE+ E L R+A W+ +N++++ +
Sbjct: 353 LTMRLAGMSQINSHINLFNEICTT---------ETVNEVELFGQRIANWLTENHIVQHLF 403
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 404 GPNLHV-EIVKQAHVLLNFLAVENQISEDDIKLIWQATQLKH--CSKTIFDILPSLVKNL 460
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 461 APRPAMHLY 469
>gi|390176951|ref|XP_003736243.1| GA26951, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858852|gb|EIM52316.1| GA26951, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 3956
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S N +N NE+ E L R+A W+ +N++++ +
Sbjct: 353 LTMRLAGMSQINSHINLFNEICTT---------ETVNEVELFGQRIANWLTENHIVQHLF 403
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 404 GPNLHV-EIVKQAHVLLNFLAVENQISEDDIKLIWQATQLKH--CSKTIFDILPSLVKNL 460
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 461 APRPAMHLY 469
>gi|195158717|ref|XP_002020232.1| GL13871 [Drosophila persimilis]
gi|194117001|gb|EDW39044.1| GL13871 [Drosophila persimilis]
Length = 3675
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S N +N NE+ E L R+A W+ +N++++ +
Sbjct: 353 LTMRLAGMSQINSHINLFNEICTT---------ETVNEVELFGQRIANWLTENHIVQHLF 403
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 404 GPNLHV-EIVKQAHVLLNFLAVENQISEDDIKLIWQATQLKH--CSKTIFDILPSLVKNL 460
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 461 APRPAMHLY 469
>gi|195331699|ref|XP_002032537.1| GM23472 [Drosophila sechellia]
gi|194121480|gb|EDW43523.1| GM23472 [Drosophila sechellia]
Length = 3776
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 355 IILRLLQISSFNGKMNALNEV--NKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEI 412
+ +RL ++ N +N NE+ + I V + R +A W+ +N++++
Sbjct: 355 LTMRLAGMAQINAHINLFNEICTTETINEVELFGQR-----------IANWLTENHIVQH 403
Query: 413 VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAW 472
+ +LH + V++ +L FL E +S D+ +W A KH K + ++L L
Sbjct: 404 LFGPNLHV-EIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPSLVK 460
Query: 473 DFSPVQLDHLF 483
+ +P HL+
Sbjct: 461 NLTPRPAMHLY 471
>gi|156371532|ref|XP_001628817.1| predicted protein [Nematostella vectensis]
gi|156215803|gb|EDO36754.1| predicted protein [Nematostella vectensis]
Length = 284
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 400 MAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAI 459
+++W+ DNN++E + +LH + +++ + IL +L +E +S LD +WAA KH +
Sbjct: 172 LSQWLLDNNIVEHLFGPNLHV-ELLKQSQIILNYLAQEGCVSNQHLDCIWAAAQLKHASC 230
Query: 460 VKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRL 508
VH+ L L + +L A SA+ KQT L ++ R+
Sbjct: 231 Y--VHDPLMILTKHLDMPSILYLLDQVSAMQPSAHTKQTLFLASILLRI 277
>gi|340384116|ref|XP_003390560.1| PREDICTED: probable ubiquitin carboxyl-terminal hydrolase
FAF-X-like [Amphimedon queenslandica]
Length = 939
Score = 42.7 bits (99), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
Query: 722 GAEYLWRVITNAGEDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDT 781
G +YLW + + I+ + I+L+K++ T+L KL Q H+ FI+ C+ R+ D
Sbjct: 8 GLDYLWDCVLQVNDSISSKPIELMKDIFTNLSSKLPQE--QIHQEFISVCMQRM----DI 61
Query: 782 IG-LSHTYRP--ILPEARQIWTALAQ------EAIFHCDRE 813
I + + Y+P ++ EA L + E I CD E
Sbjct: 62 INKVLYQYKPHELVTEASDQVNKLVRCLKLLLEYIVECDNE 102
>gi|195573540|ref|XP_002104750.1| GD18279 [Drosophila simulans]
gi|194200677|gb|EDX14253.1| GD18279 [Drosophila simulans]
Length = 971
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N +N NE+ E L R+A W+ +N++++ +
Sbjct: 355 LTMRLAGMAQINAHINLFNEICTT---------ETVNEVELFGQRIANWLTENHIVQHLF 405
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 406 GPNLH-VEIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPSLVKNL 462
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 463 TPRPAMHLY 471
>gi|195504728|ref|XP_002099203.1| GE10785 [Drosophila yakuba]
gi|194185304|gb|EDW98915.1| GE10785 [Drosophila yakuba]
Length = 3947
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N +N NE+ E L R+A W+ +N++++ +
Sbjct: 355 LTMRLAGMAQINAHINLFNEICTT---------ETVNEVELFGQRIANWLTENHIVQHLF 405
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 406 GPNLHV-EIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPSLVKNL 462
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 463 APRPAMHLY 471
>gi|194909505|ref|XP_001981960.1| GG12331 [Drosophila erecta]
gi|190656598|gb|EDV53830.1| GG12331 [Drosophila erecta]
Length = 3902
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N +N NE+ E L R+A W+ +N++++ +
Sbjct: 355 LTMRLAGMAQINAHINLFNEICTT---------ETVNEVELFGQRIANWLTENHIVQHLF 405
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 406 GPNLHV-EIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPSLVKNL 462
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 463 APRPAMHLY 471
>gi|442620935|ref|NP_001262922.1| CG5794, isoform G [Drosophila melanogaster]
gi|440217849|gb|AGB96302.1| CG5794, isoform G [Drosophila melanogaster]
Length = 3921
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N +N NE+ E L R+A W+ +N++++ +
Sbjct: 355 LTMRLAGMAQINAHINLFNEICTT---------ETVNEVELFGQRIANWLTENHIVQHLF 405
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 406 GPNLHV-EIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPSLVKNL 462
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 463 TPRPAMHLY 471
>gi|195445947|ref|XP_002070556.1| GK12120 [Drosophila willistoni]
gi|194166641|gb|EDW81542.1| GK12120 [Drosophila willistoni]
Length = 4007
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N +N NE+ E L R+A W+ +N++++ +
Sbjct: 403 LTMRLAGMAQINAHINLFNEICTT---------ETVNEVELFGQRIANWLTENHIVQHLF 453
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 454 GPNLHV-EIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPSLVKNL 510
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 511 APRPAMHLY 519
>gi|118379729|ref|XP_001023030.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89304797|gb|EAS02785.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 3610
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/253 (18%), Positives = 97/253 (38%), Gaps = 55/253 (21%)
Query: 190 LVDLINLFGSMGGFQILLERFQNKST-LTIPVIFALIRPFGQVHEYLTLPTILKYFMPIL 248
LV IN FG +GGF +L+R QN S + + + +H +L L + +Y +
Sbjct: 412 LVRYINYFGEIGGFDNILKRLQNFSNWCPLEITQYYLEGIHNIHIFLFLDFVREYIPQMW 471
Query: 249 EIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILENLTD 308
+ +L N ++ L+ K + + II S ++L +R
Sbjct: 472 KATQYLLMNPSEANLRTYDK-----EKLESIISSLEVLLSR------------------- 507
Query: 309 EELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGK 368
A S D V + E + + L+ Q +
Sbjct: 508 --------------AFSY---------------SDQVHETEKLSMSLALKCYQTDVLKQR 538
Query: 369 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLE 428
+ L + ++I V ++ + + P + +WIK NN++E + +++H + + +
Sbjct: 539 LAGLKLICEIIKYVKQNSYKSSDNLIIKPAKFVEWIKTNNIIEDLYLNNIH-SEMINRSA 597
Query: 429 KILRFLIKEKALS 441
+ +F++ + +
Sbjct: 598 EFFKFMLSQNLFT 610
>gi|301120782|ref|XP_002908118.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262103149|gb|EEY61201.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 2859
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Query: 399 RMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDA 458
+++ W+ + +LE + D +H+ + V + +++FL L +D +W + K
Sbjct: 433 KLSAWVVEKKILEEIFGDRIHR-EIVSRSALLVKFLADSNKLDTHSIDVIWQSCIQKDQT 491
Query: 459 IVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQT--EKLLELIRRLAED----- 511
+V +H LL + L HL AS + K +L+ ++RLA +
Sbjct: 492 LVHEIHNLLIATVPFLTNELLLHLVESIHASLLRSLEKNEPFPELISFLQRLATNSPSFL 551
Query: 512 -DKDGVMADKVLNLFWSL 528
D++ + +L L WS+
Sbjct: 552 MDRNVNVTTAILQLLWSI 569
>gi|24649731|ref|NP_651275.1| CG5794, isoform D [Drosophila melanogaster]
gi|23172191|gb|AAF56319.2| CG5794, isoform D [Drosophila melanogaster]
Length = 3912
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N +N NE+ E L R+A W+ +N++++ +
Sbjct: 355 LTMRLAGMAQINAHINLFNEICTT---------ETVNEVELFGQRIANWLTENHIVQHLF 405
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 406 GPNLHV-EIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPSLVKNL 462
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 463 TPRPAMHLY 471
>gi|386766427|ref|NP_733022.2| CG5794, isoform F [Drosophila melanogaster]
gi|383292932|gb|AAN14009.2| CG5794, isoform F [Drosophila melanogaster]
Length = 3912
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N +N NE+ E L R+A W+ +N++++ +
Sbjct: 355 LTMRLAGMAQINAHINLFNEICTT---------ETVNEVELFGQRIANWLTENHIVQHLF 405
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 406 GPNLHV-EIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPSLVKNL 462
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 463 TPRPAMHLY 471
>gi|442620937|ref|NP_001262923.1| CG5794, isoform H [Drosophila melanogaster]
gi|440217850|gb|AGB96303.1| CG5794, isoform H [Drosophila melanogaster]
Length = 3930
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N +N NE+ E L R+A W+ +N++++ +
Sbjct: 355 LTMRLAGMAQINAHINLFNEICTT---------ETVNEVELFGQRIANWLTENHIVQHLF 405
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 406 GPNLHV-EIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPSLVKNL 462
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 463 TPRPAMHLY 471
>gi|194741896|ref|XP_001953423.1| GF17759 [Drosophila ananassae]
gi|190626482|gb|EDV42006.1| GF17759 [Drosophila ananassae]
Length = 3889
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N +N NE+ E L R+A W+ +N++++ +
Sbjct: 355 LTMRLAGMAQINAHINLFNEICTT---------ETVNEVELFGQRIANWLTENHIVQHLF 405
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 406 GPNLHV-EIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPSLVKNL 462
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 463 APRPAMHLY 471
>gi|307103207|gb|EFN51469.1| hypothetical protein CHLNCDRAFT_140218 [Chlorella variabilis]
Length = 234
Score = 42.0 bits (97), Expect = 1.5, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 356 ILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLR 415
+LRLL +F ++ + ++ + +A +Y R E ++ W++ + ++++VL+
Sbjct: 164 VLRLLHAPAFTRQLAGIKQL-RDLAAFTFYQSRLGSEAFMA------WLQQHGIVQLVLK 216
Query: 416 DSLHQPQYVEKLEKILR 432
+LHQ QY +++ + LR
Sbjct: 217 SNLHQAQYADQMARHLR 233
>gi|403375867|gb|EJY87910.1| Ubiquitin carboxyl-terminal hydrolase family protein [Oxytricha
trifallax]
Length = 3712
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 141/308 (45%), Gaps = 23/308 (7%)
Query: 322 DAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAG 381
+++S + ++ + + R QE + + I LL+ ++ + EV + I G
Sbjct: 556 ESLSGLQRAFQSILKRHYTQEKYNQIMAELNFGIGFSLLKSEKLEQRIQGIKEVIEQIKG 615
Query: 382 VAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALS 441
+ ++ T + MAK +K N+ E + D+ H Q +++ ++++F +EK L+
Sbjct: 616 TRF----SMKKTLSTKEVMAK-LKQENIFETIFGDNYH-IQLIQRAMEVIKFFAQEKQLT 669
Query: 442 LGDLDAVWAAQAGKHDAIVK-NVHELLAKLAWDFSPVQLDHLFVCF-QASWTSANRKQTE 499
++D +W+ A K D K +++++ + + F +++ L F Q K+ E
Sbjct: 670 EKEIDQIWS--ATKRDQQTKLEIYKIIQECSMQFRNEEIEMLVQRFAQVPPEQFVEKEIE 727
Query: 500 KLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVM-TDIMEQALASHLKILDYSCSQER 558
+ EL + + K + LFW +A + I+E A+ K +D + +R
Sbjct: 728 CVYELSKYFSY--KVASFLVRAAQLFWDIAVQERAYKKQIIELAMD---KFIDLIRNWDR 782
Query: 559 DKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYE--PGQNLNSHAPLSSRSHSSNNR 616
D QK ++ I + ++N +++ IK I + E P +N+ L+ ++
Sbjct: 783 D-QKLNFIYKAIAKIRNNE----SSVQCIKIIQKILEQIPNYKVNNQPTLNDYANKLIKE 837
Query: 617 QSIIDILI 624
+ I++++I
Sbjct: 838 EDIVNLVI 845
>gi|45553501|ref|NP_996287.1| CG5794, isoform E [Drosophila melanogaster]
gi|45446634|gb|AAS65209.1| CG5794, isoform E [Drosophila melanogaster]
Length = 2832
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N +N NE+ E L R+A W+ +N++++ +
Sbjct: 355 LTMRLAGMAQINAHINLFNEICTT---------ETVNEVELFGQRIANWLTENHIVQHLF 405
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 406 GPNLH-VEIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPSLVKNL 462
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 463 TPRPAMHLY 471
>gi|388329687|gb|AFK29241.1| CG5794-like protein [Drosophila buzzatii]
Length = 3907
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N +N NE+ E L R+A W+ +N +++ +
Sbjct: 367 LTMRLAGMAQINAHINLFNEICTT---------ETVNEVELFGQRIANWLTENQIVQHLF 417
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 418 GPNLHV-EIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPALVKNL 474
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 475 APRPAMHLY 483
>gi|195107871|ref|XP_001998517.1| GI23592 [Drosophila mojavensis]
gi|193915111|gb|EDW13978.1| GI23592 [Drosophila mojavensis]
Length = 3905
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N +N NE+ E L R+A W+ +N +++ +
Sbjct: 366 LTMRLAGMAQINAHINLFNEICTT---------ETVNEVELFGQRIANWLTENQIVQHLF 416
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 417 GPNLHV-EIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPALVKNL 473
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 474 APRPAMHLY 482
>gi|195388692|ref|XP_002053013.1| GJ23566 [Drosophila virilis]
gi|194151099|gb|EDW66533.1| GJ23566 [Drosophila virilis]
Length = 3908
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N +N NE+ E L R+A W+ +N +++ +
Sbjct: 369 LTMRLAGMAQINAHINLFNEICTT---------ETVNEVELFGQRIANWLTENQIVQHLF 419
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 420 GPNLH-VEIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPALVKNL 476
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 477 APRPAMHLY 485
>gi|195037232|ref|XP_001990068.1| GH19134 [Drosophila grimshawi]
gi|193894264|gb|EDV93130.1| GH19134 [Drosophila grimshawi]
Length = 3968
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL ++ N +N NE+ E L R+A W+ +N +++ +
Sbjct: 373 LTMRLAGMAQINAHINLFNEICTT---------ETVNEVELFGQRIANWLTENQIVQHLF 423
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + V++ +L FL E +S D+ +W A KH K + ++L L +
Sbjct: 424 GPNLH-VEIVKQAHVLLNFLAVENQISEEDIKLIWQATQLKH--CSKTIFDILPALVKNL 480
Query: 475 SPVQLDHLF 483
+P HL+
Sbjct: 481 APRPAMHLY 489
>gi|348677085|gb|EGZ16902.1| hypothetical protein PHYSODRAFT_559717 [Phytophthora sojae]
Length = 2882
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 400 MAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAI 459
++ W+ + +LE + D +H+ + V + +++FL + L +D +W + K +
Sbjct: 434 LSAWVVEKKILEEIFGDRIHR-EIVSRSALLVKFLAESNKLDAHAIDVIWQSCIQKDQTL 492
Query: 460 VKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELI---RRLAEDDKDGV 516
V +H LL S L HL AS N ++ E ELI +RLA + +
Sbjct: 493 VHEIHNLLITTVPFLSNELLLHLVESIHASLLR-NLEKNEPFPELISFLQRLATNSPSFL 551
Query: 517 M------ADKVLNLFWSL 528
M +L L WS+
Sbjct: 552 MERNVNVTTAILQLLWSI 569
>gi|145490903|ref|XP_001431451.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398556|emb|CAK64053.1| unnamed protein product [Paramecium tetraurelia]
Length = 2377
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 352 RLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPE-EEWLTPDRMAKWIKDNNVL 410
+L++ L+ L+ S ++ ++E+ Y + ++ D + +WI N +L
Sbjct: 388 QLQLALKFLKSSFLEKRVKGISEIKDFTERSKYEQQTSLKFRSSISKDDLIRWISQNRIL 447
Query: 411 E-IVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELL 467
+ +L DS+H P+ +++ + FL + +A + +D +W KH+ ++E
Sbjct: 448 DYTLLGDSVH-PELIKRSSDVAVFLCRNQAFQIDYIDKIWKNNHDKHETTQLALYEFF 504
>gi|241619711|ref|XP_002407152.1| ubiquitin specific protease, putative [Ixodes scapularis]
gi|215500945|gb|EEC10439.1| ubiquitin specific protease, putative [Ixodes scapularis]
Length = 2981
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 16/146 (10%)
Query: 355 IILRLLQISSFNGKMNALNEV--NKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEI 412
+ +RL I+ N ++ LNE+ ++ + G +A W+ + V+E
Sbjct: 272 LTMRLSGIAQINSHISMLNELCHSETVVGAQA-----------MAKALATWLVEYRVVEH 320
Query: 413 VLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAW 472
+ +LH + +++ +L L E L+ LDAVWAA KH + V ELL L
Sbjct: 321 IFGPNLHV-EVIKQSHLVLGLLASEGQLTTSHLDAVWAAGQLKHCG--RQVLELLPPLMR 377
Query: 473 DFSPVQLDHLFVCFQASWTSANRKQT 498
+ HL+ A+ + +QT
Sbjct: 378 NLRDGPAMHLYARLCATPPREHSEQT 403
>gi|118397798|ref|XP_001031230.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89285555|gb|EAR83567.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 2585
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 349 EIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVA-----YYPHRHPEEEWLTPDRMAKW 403
E +K I++L++ K+ + + ++I+ + YY ++ ++ ++
Sbjct: 427 EKLEIKCIIKLIKCPFLEKKILGVLQFREIISRASANNKQYYSKDIYPYQYFDKQKLKEY 486
Query: 404 IKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNV 463
++ N+L+ L ++ H P+ ++ +IL FL +E AL ++ +W KH+A + +
Sbjct: 487 LEQENLLDFFLGENFH-PEIFKRSIEILTFLSEENALLPKHIEQIWKLTENKHEADLAAI 545
Query: 464 HELLAKLAWDFSPVQLDHLF 483
+ ++ +L+ L+ L+
Sbjct: 546 YSVIIELSKILQEQSLNQLY 565
>gi|432843794|ref|XP_004065668.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 34-like [Oryzias latipes]
Length = 3659
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 424 VEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPVQLDHLF 483
+++ + IL FL E LS +D +WAA KH + +H+L L + PV L H+
Sbjct: 410 IKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNLDPVPLRHVL 467
Query: 484 VCFQASWTSANRKQTEKLLELI 505
SA+ +QT L ++
Sbjct: 468 NLVSGLHPSAHTEQTLYLASML 489
>gi|85373569|ref|YP_457631.1| beta-galactosidase [Erythrobacter litoralis HTCC2594]
gi|84786652|gb|ABC62834.1| beta-galactosidase [Erythrobacter litoralis HTCC2594]
Length = 632
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 7/40 (17%)
Query: 662 GVAYYPHRHPEEEWLTPDRQLTESGLKCFEKFFKSVNIGE 701
GV YYP PEE W T R + E+GLKC V IGE
Sbjct: 4 GVCYYPEHWPEERWPTDARMMRETGLKC-------VRIGE 36
>gi|317503446|ref|ZP_07961484.1| methionyl-tRNA formyltransferase [Prevotella salivae DSM 15606]
gi|315665434|gb|EFV05063.1| methionyl-tRNA formyltransferase [Prevotella salivae DSM 15606]
Length = 326
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 683 TESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRAI 742
TE+G+ F F NI G+++++ K + D+AD+ EY++ + N G DIA I
Sbjct: 134 TETGVTTF---FLDKNIDTGRIIMQ--KHFSIPDDADV---EYVYNGLMNLGADIATETI 185
Query: 743 DLLKEVSTHLGPKLQSSLTQFHK 765
D + E ++ QSS QF++
Sbjct: 186 DKMLENDGNIDSIAQSSFMQFNE 208
>gi|145477007|ref|XP_001424526.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391591|emb|CAK57128.1| unnamed protein product [Paramecium tetraurelia]
Length = 2632
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 151 KFHTFNSNQQSISVPVNSNIADDEIFARPIDYY-------KNQRGWLV--DLINLFGSMG 201
K +TF+ Q I I D F P ++Y K R +V +IN FGS G
Sbjct: 269 KKNTFSKGQYPIPYSQEDIIQDCNDFLYPENHYAIPRFQTKQTRRSIVLTQMINDFGSQG 328
Query: 202 GFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPE--ILENLT 259
FQ +LE+ Q K TI + ++ +HE L + Y +P L++ + IL++ T
Sbjct: 329 LFQYILEQIQAKC--TIDFLHLYMQVLNNIHEMLHRQFVSNY-VPALQVAVQNNILQS-T 384
Query: 260 DEELKKEAKNESKNDAISVIIKSCKLLAARV-PHQEDTEIV 299
D L+ + + I+ I++S L RV P Q +EI+
Sbjct: 385 DNNLRNFSAQK-----ITDILQSLSNLLKRVYPIQRKSEII 420
>gi|47198272|emb|CAF88665.1| unnamed protein product [Tetraodon nigroviridis]
Length = 275
Score = 39.3 bits (90), Expect = 8.4, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 53 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLIHNNVVEHIF 105
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
+LH + +++ + IL FL E LS +D +WAA
Sbjct: 106 GPNLH-IEIIKQCQVILNFLAAESRLSTQHVDCIWAA 141
>gi|328875592|gb|EGG23956.1| hypothetical protein DFA_06094 [Dictyostelium fasciculatum]
Length = 2744
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 20/237 (8%)
Query: 400 MAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAI 459
+ W+ N ++E + S QP + I+ FL L L+ +W + GKH+++
Sbjct: 481 LLNWVLKNEIVENFCKIS-DQPDIMTNGIHIMIFLCHSGKLENHHLELLWNSSIGKHESV 539
Query: 460 VKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQ--TEKLLELI---RRLAEDDKD 514
++ + +L + QLD+ + F + ++ + +LL I R++ ++
Sbjct: 540 KNIIYMSILELVGHLNIKQLDYFYEYFNKTLINSLKASDFDNELLNFIFNFSRISIQHQE 599
Query: 515 GVMADK---VLNLFWSLAHSDDV-MTDIMEQALASHLK--ILDYSCSQERDKQKTIWLQT 568
++ K +++FW L +D + D Q L + K ++ QE +T ++
Sbjct: 600 NILTLKKCYGVDIFWRLIQDNDSQIADQYTQTLCTKSKSYLISLLKLQECIGLRTQYIDL 659
Query: 569 CIEEFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSIIDILIK 625
IE K+N VV +L I +I L+ + L S S + I DI K
Sbjct: 660 AIENIKNNVS-VVQSLSLIVNIVELFVAKK-------LRSVIESLEQKSKIFDIFFK 708
>gi|281207943|gb|EFA82122.1| hypothetical protein PPL_05027 [Polysphondylium pallidum PN500]
Length = 2485
Score = 39.3 bits (90), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 36/269 (13%)
Query: 400 MAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAI 459
+ WI + ++E + S QP + ++ FL + L L+ +W + GKH+++
Sbjct: 446 LLNWILKHEIVETFCKIS-DQPDIIRHGLPVMIFLCQFGKLENHQLELLWNSSIGKHESV 504
Query: 460 VKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEK-LLELIRRL---AEDDKDG 515
++ L +L QLD+ + F S + + LL+ I L A +
Sbjct: 505 RSTIYNALLELFGYLHLEQLDYFYEYFNKSIVGFKSVEFDNDLLQFIYNLSMIAIQHPEN 564
Query: 516 VMADK---VLNLFWSL----------AHSDDVMTDIMEQA---LASHLKILDYSCSQERD 559
V + K L+LFW L H D+V ++ ++ L S L++ QE
Sbjct: 565 VGSSKKSYGLDLFWKLLQDRDQNITFGHGDNVAQSLINRSKTFLVSLLRL------QECA 618
Query: 560 KQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQSI 619
+ +++ IE K+ + V +L I +I L+ Q + S N+ +
Sbjct: 619 ALRMTYIELAIENIKTF-QSVYQSLSLIVNIVELFVKKQR--------ATIESLENKYKL 669
Query: 620 IDILIKNHSLIMLITNNLCSLLQISSFNG 648
D+ K + + S L SS G
Sbjct: 670 FDLFFKEIANFKKVIAQRSSTLSFSSLEG 698
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,824,819,309
Number of Sequences: 23463169
Number of extensions: 578549247
Number of successful extensions: 1548431
Number of sequences better than 100.0: 483
Number of HSP's better than 100.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 1544937
Number of HSP's gapped (non-prelim): 2188
length of query: 866
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 714
effective length of database: 8,792,793,679
effective search space: 6278054686806
effective search space used: 6278054686806
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)