BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6009
(866 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P70398|USP9X_MOUSE Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Mus
musculus GN=Usp9x PE=1 SV=2
Length = 2559
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/697 (55%), Positives = 474/697 (68%), Gaps = 66/697 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQIEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLAQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH +EEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGSSEDEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGK 649
C L+ E QNL+ S RS R +I+ L NH+L+ L+ NL + ++ G+
Sbjct: 577 CSLFGEAPQNLSQ----SQRSPHVFYRHDLINQLQHNHALVTLVAENLATYMESMRMYGR 632
Query: 650 MNALNEVNKVIAGVAYYPHRHPEEEWLTPDRQLTESG 686
N + V G + Y H +E L R L + G
Sbjct: 633 DNEDYDPQTVRLG-SRYSHVQEVQERLNFLRFLLKDG 668
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIACRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
>sp|Q93008|USP9X_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Homo
sapiens GN=USP9X PE=1 SV=3
Length = 2570
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/653 (57%), Positives = 458/653 (70%), Gaps = 65/653 (9%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTC--------KFPVEKLAILDSKISSSRWV 53
PP Q +S D S +S G G FP LA LD I+ RWV
Sbjct: 26 PPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQLEDEEPAFPHTDLAKLDDMINRPRWV 85
Query: 54 VPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIH 113
VPVLP+ ELE L++AAI+L K DV SE CQRFFR+GL+ISFTKILTD+AV WK+ IH
Sbjct: 86 VPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFFRDGLTISFTKILTDEAVSGWKFEIH 145
Query: 114 NCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADD 173
CI NN +L+EL V KL QD FPLL++L M NP KFH +N + SV + + +D
Sbjct: 146 RCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESVSSSVQLPED 205
Query: 174 EIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHE 233
E+FAR D ++ +GWLVDL+N FG++ GFQIL +RF N S L + +I ALI+PFGQ +E
Sbjct: 206 ELFARSPDP-RSPKGWLVDLLNKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYE 264
Query: 234 YLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQ 293
+LTL T+ KYF+PI+E
Sbjct: 265 FLTLHTVKKYFLPIIE-------------------------------------------- 280
Query: 294 EDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRL 353
+VP+ LENLTDEELKKEAKNE+KNDA+S+IIKS K LA+RVP QE+TVK LEIFRL
Sbjct: 281 ----MVPQFLENLTDEELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRL 336
Query: 354 KIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDRMAKWIKDNNVL 410
K+ILRLLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +RMA+WI+ NN+L
Sbjct: 337 KMILRLLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNIL 396
Query: 411 EIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKL 470
IVLRDSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAAQAGKH+AIVKNVH+LLAKL
Sbjct: 397 SIVLRDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKL 456
Query: 471 AWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAH 530
AWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAEDDKDGVMA KVLNL W+LAH
Sbjct: 457 AWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAH 516
Query: 531 SDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDI 590
SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IEE ++N KWV+PAL+QI++I
Sbjct: 517 SDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREI 576
Query: 591 CCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
C L+ E QNL+ + RS R +I+ L NH+L+ L+ NL + ++
Sbjct: 577 CSLFGEAPQNLSQ----TQRSPHVFYRHDLINQLQHNHALVTLVAENLATYME 625
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN EGKLV K+R+ ++D+ +LIG +YLWRV+ + +DIA RA
Sbjct: 732 LTENGMKCFERFFKAVNCREGKLV--AKRRAYMMDDLELIGLDYLWRVVIQSNDDIASRA 789
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+LQ + H+ FI C DRL+A YDT+
Sbjct: 790 IDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTL 830
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 675 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 729
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---EEEWLTPDR 680
LLQISSFNGKMNALNEVNKVI+ V+YY HRH EEEWLT +R
Sbjct: 342 LLQISSFNGKMNALNEVNKVISSVSYYTHRHGNPEEEEWLTAER 385
>sp|O00507|USP9Y_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-Y OS=Homo
sapiens GN=USP9Y PE=1 SV=2
Length = 2555
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/611 (58%), Positives = 443/611 (72%), Gaps = 57/611 (9%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP +LA LD I+ RWVVPVLP+ ELE L++AAI+L DV SE CQRFFR+GL+I
Sbjct: 68 FPHTELANLDDMINRPRWVVPVLPKGELEVLLEAAIDLSVKGLDVKSEACQRFFRDGLTI 127
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SFTKIL D+AV WK+ IH CI NN +L+EL V KL QD FPLL++L M NP KFH
Sbjct: 128 SFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHI 187
Query: 155 FNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERFQNKS 214
+N + + N+ + +DE+FAR D ++ +GWLVDLIN FG++ GFQIL +RF N S
Sbjct: 188 YNGTRPCELISSNAQLPEDELFARSSDP-RSPKGWLVDLINKFGTLNGFQILHDRFFNGS 246
Query: 215 TLTIPVIFALIRPFGQVHEYLTLPTILKYFMPILEIVPEILENLTDEELKKEAKNESKND 274
L I +I ALI+PFGQ +E+L+ T+ KYF+P++E
Sbjct: 247 ALNIQIIAALIKPFGQCYEFLSQHTLKKYFIPVIE------------------------- 281
Query: 275 AISVIIKSCKLLAARVPHQEDTEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLL 334
IVP +LENLTDEELKKEAKNE+KNDA+S+IIKS K L
Sbjct: 282 -----------------------IVPHLLENLTDEELKKEAKNEAKNDALSMIIKSLKNL 318
Query: 335 AARVPHQEDTVKQLEIFRLKIILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP---E 391
A+R+ Q++T+K LEIFRLK+ILRLLQISSFNGKMNALNE+NKVI+ V+YY HRH E
Sbjct: 319 ASRISGQDETIKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPEE 378
Query: 392 EEWLTPDRMAKWIKDNNVLEIVLRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAA 451
EEWLT +RMA+WI+ NN+L IVL+DSLHQPQYVEKLEKILRF+IKEKAL+L DLD +WAA
Sbjct: 379 EEWLTAERMAEWIQQNNILSIVLQDSLHQPQYVEKLEKILRFVIKEKALTLQDLDNIWAA 438
Query: 452 QAGKHDAIVKNVHELLAKLAWDFSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAED 511
QAGKH+AIVKNVH+LLAKLAWDFSP QLDHLF CF+ASWT+A++KQ EKLLELIRRLAED
Sbjct: 439 QAGKHEAIVKNVHDLLAKLAWDFSPGQLDHLFDCFKASWTNASKKQREKLLELIRRLAED 498
Query: 512 DKDGVMADKVLNLFWSLAHSDDVMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIE 571
DKDGVMA KVLNL W+LA SDDV DIM+ AL++H+KILDYSCSQ+RD QK W+ IE
Sbjct: 499 DKDGVMAHKVLNLLWNLAQSDDVPVDIMDLALSAHIKILDYSCSQDRDAQKIQWIDHFIE 558
Query: 572 EFKSNPKWVVPALRQIKDICCLY-EPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLI 630
E ++N KWV+PAL+QI++IC L+ E QNL+ + RS R +I+ L +NH+L+
Sbjct: 559 ELRTNDKWVIPALKQIREICSLFGEASQNLSQ----TQRSPHIFYRHDLINQLQQNHALV 614
Query: 631 MLITNNLCSLL 641
L+ NL + +
Sbjct: 615 TLVAENLATYM 625
Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTE+G+KCFE+FFK+VN E KL+ K+RS ++D+ +LIG +YLWRV+ + ++IA RA
Sbjct: 733 LTENGMKCFERFFKAVNCRERKLI--AKRRSYMMDDLELIGLDYLWRVVIQSSDEIANRA 790
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKE+ T+LGP+L+++ H+ FI C DRL+A YDT+
Sbjct: 791 IDLLKEIYTNLGPRLKANQVVIHEDFIQSCFDRLKASYDTL 831
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 793 PEARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEP 847
P+A+QIW LA+ A++ CDREACFKW+SKLM DEPDLDP + KDFFE +VL +P
Sbjct: 676 PQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDP 730
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 615 NRQSIIDILIKNHSLIMLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPHRHP--- 671
+R S D IKN + L + LLQISSFNGKMNALNE+NKVI+ V+YY HRH
Sbjct: 320 SRISGQDETIKNLEIFRL--KMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHSNPE 377
Query: 672 EEEWLTPDR 680
EEEWLT +R
Sbjct: 378 EEEWLTAER 386
>sp|P55824|FAF_DROME Probable ubiquitin carboxyl-terminal hydrolase FAF OS=Drosophila
melanogaster GN=faf PE=1 SV=2
Length = 2778
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/649 (53%), Positives = 440/649 (67%), Gaps = 95/649 (14%)
Query: 35 FPVEKLAILDSKISSSRWVVPVLPEQELECLIKAAIELCKTNSDVDSEPCQRFFREGLSI 94
FP KL L KIS+ RWVVPVLPEQELE L+ AAIEL + D D EPC F+R GLS
Sbjct: 107 FPTTKLRSLTQKISNPRWVVPVLPEQELEVLLNAAIELTQAGVDHDCEPCVEFYRNGLST 166
Query: 95 SFTKILTDDAVHSWKYNIHNCIYNNCQKLLELIVLKLGQDVFPLLDILTMVFNPCNKFHT 154
SF KILTD+AV+SWK NIH+CI +C KLL LI + + +D LLD+L +VF+P NKF+T
Sbjct: 167 SFAKILTDEAVNSWKNNIHHCILVSCGKLLHLIAIHMQRDNPYLLDLLAIVFDPENKFNT 226
Query: 155 FNSNQQ--SISVP--VNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMGGFQILLERF 210
FN+ +Q + P + + ++++ARP KN RGWLVDLIN FG +GGF LLERF
Sbjct: 227 FNAGRQPECFAAPDYIWGQLDSNKMYARPPPEPKNARGWLVDLINRFGQLGGFDNLLERF 286
Query: 211 ----------QNKST------------------LTIPVIFALIRPFGQVHEYLTLPTILK 242
QNK T LT+ +I +L+RPFGQ +E L TI K
Sbjct: 287 NIGLELLKRNQNKCTGKNISVEGRVENGAQDNRLTLALIHSLLRPFGQCYELLMPATIAK 346
Query: 243 YFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEI 302
YFMP + V ++
Sbjct: 347 YFMPTWNV------------------------------------------------VLDL 358
Query: 303 LENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIILRLLQI 362
L++ TDEELK+E K E +ND I+ I+KS +LLA+R+ QE+ ++ LE+FRLK+ILRLLQ+
Sbjct: 359 LDSFTDEELKREVKPEGRNDYINGIVKSARLLASRLTGQEELIRDLEMFRLKMILRLLQV 418
Query: 363 SSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDRMAKWIKDNNVLEIV 413
SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DRMA+WIK ++VL +V
Sbjct: 419 SSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDVLGVV 478
Query: 414 LRDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWD 473
L+DSLHQPQYVEKLEKI+RFLIKE+AL+L DLDAVW AQAGKH+AIVKNVH+LLAKLAWD
Sbjct: 479 LKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAVWRAQAGKHEAIVKNVHDLLAKLAWD 538
Query: 474 FSPVQLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDD 533
F+P QLDHLF FQAS T+AN++Q E+LLELIRRLAEDDK+GVMA KVL LFW+LAHS +
Sbjct: 539 FTPEQLDHLFEAFQASMTTANKRQRERLLELIRRLAEDDKNGVMAQKVLKLFWTLAHSQE 598
Query: 534 VMTDIMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFKSNPKWVVPALRQIKDICCL 593
V ++++QAL +H+KILDYSCSQERD QKTIWL C++E KS WV+PALR I+DICCL
Sbjct: 599 VPPEVLDQALGAHVKILDYSCSQERDAQKTIWLDKCVDELKSGDGWVLPALRLIRDICCL 658
Query: 594 YEPGQNLNSHAPLSSRSHSSNNRQSIIDILIKNHSLIMLITNNLCSLLQ 642
Y+ N HA R+ +S NRQ +I+ L ++SL++L+TN+L + ++
Sbjct: 659 YDTTTN---HA---QRTQTSTNRQQVIERLQNDYSLVILVTNSLTAYME 701
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 76/101 (75%), Gaps = 2/101 (1%)
Query: 682 LTESGLKCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRA 741
LTESG+KCFE+FFK+VN E KL K R +LDN DLIG +YLWRVIT GE+IA +A
Sbjct: 808 LTESGIKCFERFFKAVNSKEDKL--KAIHRGYMLDNEDLIGKDYLWRVITTGGEEIASKA 865
Query: 742 IDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTI 782
IDLLKEVST LGP+LQ ++ +FH+ FI EC RLR HY I
Sbjct: 866 IDLLKEVSTALGPRLQENIAEFHEMFIGECCSRLRTHYGNI 906
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 794 EARQIWTALAQEAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFEPIPHRET 853
+A+QIW LA A+F DRE CF+WF KLM +EPDLDP + KDFFE ++L + PH T
Sbjct: 752 QAKQIWHCLAVNAVFPADREECFRWFGKLMGEEPDLDPGINKDFFENNILQLD--PHLLT 809
Query: 854 LSGL 857
SG+
Sbjct: 810 ESGI 813
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 640 LLQISSFNGKMNALNEVNKVIAGVAYYPHRH-------PEEE--WLTPDR--QLTES--- 685
LLQ+SSFNGKMNALNE+NKV++ VAY+ HR PE+E WLT DR Q +S
Sbjct: 415 LLQVSSFNGKMNALNEINKVLSSVAYFSHRSQPLPHCMPEDEMDWLTADRMAQWIKSSDV 474
Query: 686 -GLKCFEKFFKSVNIGEGKLVLK--VKKRSLLLDNADLIGAEYLWR--------VITNAG 734
G+ + + + + + +++ +K+++L LD+ D + WR ++ N
Sbjct: 475 LGVVLKDSLHQPQYVEKLEKIIRFLIKEQALTLDDLDAV-----WRAQAGKHEAIVKNVH 529
Query: 735 EDIAFRAIDLLKEVSTHLGPKLQSSLTQFHKTFIAECLDRLR 776
+ +A A D E HL Q+S+T +K L+ +R
Sbjct: 530 DLLAKLAWDFTPEQLDHLFEAFQASMTTANKRQRERLLELIR 571
>sp|B1AY13|UBP24_MOUSE Ubiquitin carboxyl-terminal hydrolase 24 OS=Mus musculus GN=Usp24
PE=1 SV=1
Length = 2617
Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 233/902 (25%), Positives = 394/902 (43%), Gaps = 186/902 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 94 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 146
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 147 LGKCLLASTYLARLGLSESDENCKRFMERCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 206
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 207 LLIELVAERMKQDPIPIGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAIS 265
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + ++ + + + AL++P G EYL
Sbjct: 266 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALVQPLGVCAEYLNS 324
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 325 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 357
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q V ++ RL I+L
Sbjct: 358 -IPELL-------------------------SAIKLLCMRF--QPALVTTVDALRLDILL 389
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 390 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 446
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 447 IDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNAD 504
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 505 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFEATSGKVLDVLWELAHLPTLPSS 564
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SN 576
+++QAL HL IL + + ++ K ++ CIE+ K +N
Sbjct: 565 LIQQALEEHLTILSDAYAV-KEAVKRSYIIKCIEDIKRPGEWSSLEKNKKDGFKSSQLNN 623
Query: 577 PK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLI 630
P+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 624 PQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIV 666
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAYYPH---------------------- 668
L+T +L + ++++ L + V Y +
Sbjct: 667 KLVTGSLLACHRLAAAVAGPGGLTGLTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWN 726
Query: 669 -------------------RHPEEEWLTPDRQLTESG------------LKCFE------ 691
R EW T + ES L+ +E
Sbjct: 727 RAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGF 786
Query: 692 KFFKS----VNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRV-ITNAGEDIAFRAIDLLK 746
FK+ VN+ + +L K + L ++ +L+G +++W++ + + E+IA AI L+
Sbjct: 787 NLFKTFFENVNLCDHRL--KRQGAQLYVEKLELVGMDFIWKIAMESPDEEIANEAIQLII 844
Query: 747 EVS-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQE 805
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A
Sbjct: 845 NYSYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMP 903
Query: 806 AI 807
+
Sbjct: 904 TV 905
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 795 ARQIWTALAQ-EAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFE 846
A++IW L + + DRE CF+WF+K + DL+ + + F++ +L E
Sbjct: 728 AKEIWECLVTGQDVCELDREMCFEWFTK---GQHDLESDVQQQLFKEKILKLE 777
>sp|Q9UPU5|UBP24_HUMAN Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo sapiens GN=USP24
PE=1 SV=3
Length = 2620
Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 235/900 (26%), Positives = 395/900 (43%), Gaps = 182/900 (20%)
Query: 2 PPPQPGTSSDKDISQSSSHRKEGTSCGPGCTCKFPVEKLAILDSKISSSRWVVPVLPEQE 61
PPP + ++ + + + G G G +FP L L+S++ + W +P E+
Sbjct: 97 PPP-----AYHEVVDAEKNDENGNCSGEGI--EFPTTNLYELESRVLTDHWSIPYKREES 149
Query: 62 LECLIKAAIELCKTNSDVDSEPCQRFFREGLSISFTKILTDDAVHSWKYNIHNCIYNNCQ 121
L + A+ L + E C+RF + +F K+LT AVH W IH IYN
Sbjct: 150 LGKCLLASTYLARLGLSESDENCRRFMDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLM 209
Query: 122 KLLELIVLKLGQDVFP--LLDILTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFA-R 178
L+EL+ ++ QD P LL +LTM FNP N++H F + + + +FA
Sbjct: 210 LLIELVAERIKQDPIPTGLLGVLTMAFNPDNEYH-FKNRMKVSQRNWAEVFGEGNMFAVS 268
Query: 179 PIDYYKNQ-RGWLVDLINLFGSMGGFQILLERFQNKSTLTIPVIFALIRPFGQVHEYLTL 237
P+ ++ + GW+VDL+N FG +GGF + + ++ + + + ALI+P G EYL
Sbjct: 269 PVSTFQKEPHGWVVDLVNKFGELGGFAAIQAKLHSED-IELGAVSALIQPLGVCAEYLNS 327
Query: 238 PTILKYFMPILEIVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTE 297
+ P+L+ P IL + D +E +K +L++
Sbjct: 328 SVV----QPMLD--PVILTTIQDVRSVEEKD-----------LKDKRLVS---------- 360
Query: 298 IVPEILENLTDEELKKEAKNESKNDAISVIIKSCKLLAARVPHQEDTVKQLEIFRLKIIL 357
+PE+L + KLL R Q D V ++ RL I+L
Sbjct: 361 -IPELL-------------------------SAVKLLCMRF--QPDLVTIVDDLRLDILL 392
Query: 358 RLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVLRDS 417
R+L+ F+ KMN+L EV K+I + + DR+ W+ +N+VL I L +
Sbjct: 393 RMLKSPHFSAKMNSLKEVTKLIEDSTL---SKSVKNAIDTDRLLDWLVENSVLSIALEGN 449
Query: 418 LHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDFSPV 477
+ Q QY ++++ I+ L + LSL +L +W Q+G+ +++N+H ++A A F+
Sbjct: 450 IDQAQYCDRIKGIIELLGSK--LSLDELTKIWKIQSGQSSTVIENIHTIIAAAAVKFNSD 507
Query: 478 QLDHLFVCFQASWTSANRKQTEKLLELIRRLAEDDKDGVMADKVLNLFWSLAHSDDVMTD 537
QL+HLFV Q SW + + + +KLL LI R+ + + + KVL++ W LAH + +
Sbjct: 508 QLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARFETTSGKVLDVLWELAHLPTLPSS 567
Query: 538 IMEQALASHLKILDYSCSQERDKQKTIWLQTCIEEFK---------------------SN 576
+++QAL HL IL + + ++ K ++ CIE+ K +N
Sbjct: 568 LIQQALEEHLTILSDAYAV-KEAIKRSYIIKCIEDIKRPGEWSGLEKNKKDGFKSSQLNN 626
Query: 577 PK--WVVPALRQIKDICCLYEPGQNLNSHAPLSSRSHSSNNRQ----SIIDILIKNHSLI 630
P+ WVVPALRQ+ +I +RS Q SII L KN ++
Sbjct: 627 PQFVWVVPALRQLHEI-----------------TRSFIKQTYQKQDKSIIQDLKKNFEIV 669
Query: 631 MLITNNLCSLLQISSFNGKMNALNEVNKVIAGVAY--YPHRH------------------ 670
L+T +L + ++++ L+ V Y Y H
Sbjct: 670 KLVTGSLIACHRLAAAVAGPGGLSGSTLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWN 729
Query: 671 -PEEEW--LTPDRQLTESGLK-CFEKFFKSVNIGEGKL--------VLKVKKRSLLLDNA 718
+E W L + + E + CFE F K + E + +LK++ + ++
Sbjct: 730 RAKEIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGF 789
Query: 719 DL-----------------------------IGAEYLWRV-ITNAGEDIAFRAIDLLKEV 748
+L IG +++W++ + + E+IA AI L+
Sbjct: 790 NLFKTFFENVNLCDHRLKRQGAQLYVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINY 849
Query: 749 S-THLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQIWTALAQEAI 807
S +L P+L+ HK FIA+C RL A +G T + A ++ TA A +
Sbjct: 850 SYINLNPRLKKDSVSLHKKFIADCYTRLEAASSALG-GPTLTHAVTRATKMLTATAMPTV 908
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 795 ARQIWTALAQ-EAIFHCDREACFKWFSKLMTDEPDLDPKMMKDFFEKHVLHFE 846
A++IW L + + DRE CF+WF+K + DL+ + + F++ +L E
Sbjct: 731 AKEIWECLVTGQDVCELDREMCFEWFTK---GQHDLESDVQQQLFKEKILKLE 780
>sp|Q70CQ2|UBP34_HUMAN Ubiquitin carboxyl-terminal hydrolase 34 OS=Homo sapiens GN=USP34
PE=1 SV=2
Length = 3546
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 327 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 379
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 380 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 436
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A S + +QT L ++
Sbjct: 437 DPVPLRHLLNLVSALEPSVHTEQTLYLASML 467
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 190 LVDLINLFGSMGGFQILLERFQNKSTLTIPVIFA--LIRPFGQVHEYLTLPTILKYFMPI 247
L+ + LF G ++ + F+ + T+P + A I + +L +P ++++ +P
Sbjct: 209 LLRYVCLFCGKNGLSLMKDCFEYGTPETLPFLIAHAFITVVSNIRIWLHIPAVMQHIIPF 268
Query: 248 LEIVPEILENLTDEELKKEA 267
V L L+D+EL++ A
Sbjct: 269 RTYVIRYLCKLSDQELRQSA 288
>sp|Q6ZQ93|UBP34_MOUSE Ubiquitin carboxyl-terminal hydrolase 34 OS=Mus musculus GN=Usp34
PE=1 SV=3
Length = 3582
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 10/151 (6%)
Query: 355 IILRLLQISSFNGKMNALNEVNKVIAGVAYYPHRHPEEEWLTPDRMAKWIKDNNVLEIVL 414
+ +RL +S +++ N+V + V+ + E +A W+ NNV+E +
Sbjct: 327 LTMRLAGLSQITNQLHTFNDVCNNESLVS-------DTETSIAKELADWLISNNVVEHIF 379
Query: 415 RDSLHQPQYVEKLEKILRFLIKEKALSLGDLDAVWAAQAGKHDAIVKNVHELLAKLAWDF 474
+LH + +++ + IL FL E LS +D +WAA KH + +H+L L +
Sbjct: 380 GPNLH-IEIIKQCQVILNFLAAEGRLSTQHIDCIWAAAQLKH--CSRYIHDLFPSLIKNL 436
Query: 475 SPVQLDHLFVCFQASWTSANRKQTEKLLELI 505
PV L HL A + +QT L ++
Sbjct: 437 DPVPLRHLLNLVSALEPGVHTEQTLYLASML 467
Score = 35.4 bits (80), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 190 LVDLINLFGSMGGFQILLERFQNKSTLTIPVIFA--LIRPFGQVHEYLTLPTILKYFMPI 247
L+ + LF G ++ + F+ + T+P + A I + +L +P ++++ +P
Sbjct: 209 LLRYVCLFCGKNGLSLMKDCFEYGTPETLPFLIAHAFITVVSNIRIWLHIPAVMQHIIPF 268
Query: 248 LEIVPEILENLTDEELKKEA 267
V L L+D+EL++ A
Sbjct: 269 RTYVIRYLCKLSDQELRQSA 288
>sp|Q08777|MCH5_YEAST Riboflavin transporter MCH5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MCH5 PE=1 SV=2
Length = 521
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 17/142 (11%)
Query: 133 QDVFPLLDILTMVFNPCNKFHTFNSNQQ-------SISVPVNSNIADDEIFARPIDYYKN 185
++ F + I+ VF+ F T NS + +I + I + + P Y+
Sbjct: 171 RNGFRTIMIVGTVFHVAGLFATANSTKYWHFILSFAIVCGFGNGIVLSPLVSVPAHYFFK 230
Query: 186 QRGWLVDLINLFGSMGG--FQILLERFQNKSTLTIPVIFAL--IRPFGQVH-EYLTLPTI 240
+RG + + + GS+GG F I+L F + + T P + IR G + LTL I
Sbjct: 231 RRGTALAMATIGGSVGGVVFPIMLRSFFSMKSDTDPTYGFVWGIRTLGFLDLALLTLSII 290
Query: 241 LKYFMPILEIVPEILENLTDEE 262
L + E +P ++EN D E
Sbjct: 291 L-----VKERLPHVIENSKDGE 307
>sp|Q4UU37|SYH_XANC8 Histidine--tRNA ligase OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=hisS PE=3 SV=1
Length = 477
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 688 KCFEKFFKSVNIGEGKLVLKVKKRSLLLDNADLIGAEYLWRVITNAGEDIAFRAID-LLK 746
K FF+S+ + EG+L L V + +D D GAEY+ +T G IA +D +L
Sbjct: 183 KLLRGFFESLGVAEGELQLAVLRE---VDKIDKRGAEYVRDTLTGEGFGIATAQVDKILA 239
Query: 747 EVSTHLGPKLQSSLTQFHKTFIAECLDRLRAHYDTIGLSHTYRPILPEARQI 798
V+ + H A+ L +L+A ++G S T + E R++
Sbjct: 240 FVAVR---------SNGH----ADALAQLQALEASVGASATLGEGIAELREV 278
>sp|Q8IYS4|CP071_HUMAN Uncharacterized protein C16orf71 OS=Homo sapiens GN=C16orf71 PE=2
SV=3
Length = 520
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 445 LDAVWAAQAGKHDAIVKNVHELLAKLAWD--FSPVQLDHLFVCFQASWTSANRKQTEKLL 502
L + WA+Q G DAI+K V + L L D S + LF+ FQ R QT +
Sbjct: 12 LGSPWASQMGPWDAILKAVKDQLPSLDSDSPLSDYGEEELFI-FQ-------RNQTSLIP 63
Query: 503 ELIRRLAEDDKDG 515
+L LAED DG
Sbjct: 64 DLSEELAEDPADG 76
>sp|Q14674|ESPL1_HUMAN Separin OS=Homo sapiens GN=ESPL1 PE=1 SV=3
Length = 2120
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 274 DAISVIIKSC--------KLLAARVPHQEDTEIVPEILENLTDEE---LKKEAKNESKND 322
D + V++K C + L A + H+ +VP +L+ + + L E N+ N+
Sbjct: 1182 DLLQVVLKGCPEAAERLTQALQASLNHKTPPSLVPSLLDEILAQAYTLLALEGLNQPSNE 1241
Query: 323 AISVIIKS-CKLLAARVPHQE 342
++ +++S K +AAR+PH E
Sbjct: 1242 SLQKVLQSGLKFVAARIPHLE 1262
>sp|Q9ERZ8|TRPV4_RAT Transient receptor potential cation channel subfamily V member 4
OS=Rattus norvegicus GN=Trpv4 PE=2 SV=1
Length = 871
Score = 33.9 bits (76), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 17/84 (20%)
Query: 142 LTMVFNPCNKFHTFNSNQQSISVPVNSNIADDEIFARPIDYYKNQRGWLVDLINLFGSMG 201
L + NPC N +Q + +VP D E F+ +L+DL L MG
Sbjct: 632 LVTLLNPCTNMKVCNEDQSNCTVPSYPACRDSETFS----------AFLLDLFKLTIGMG 681
Query: 202 GFQILLERFQNKSTLTIPVIFALI 225
++L S+ PV+F L+
Sbjct: 682 DLEML-------SSAKYPVVFILL 698
>sp|Q92JF7|SCA2_RICCN Putative surface cell antigen sca2 OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=sca2 PE=3 SV=1
Length = 1795
Score = 33.5 bits (75), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 267 AKNESKNDAISVIIKSCKLLAARVPHQEDTEIVPEILE-----NLTDEELKKEAKNESKN 321
+ N+SKND S KS LLA R ++DT + E + TDEELKK+ ES++
Sbjct: 1394 SSNDSKNDKSSDDKKS--LLALRSSDEDDTGYATDEEELEESNSTTDEELKKDVVLESED 1451
Query: 322 DAISVIIKS 330
+AI V K+
Sbjct: 1452 EAIDVSFKT 1460
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 329,537,401
Number of Sequences: 539616
Number of extensions: 14052428
Number of successful extensions: 39646
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 39520
Number of HSP's gapped (non-prelim): 100
length of query: 866
length of database: 191,569,459
effective HSP length: 126
effective length of query: 740
effective length of database: 123,577,843
effective search space: 91447603820
effective search space used: 91447603820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)