RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy6011
(388 letters)
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase,
cell adhesion, cell J glycoprotein, membrane,
postsynaptic cell membrane; HET: NAG; 1.80A {Rattus
norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A*
2vh8_A 3bl8_A*
Length = 574
Score = 235 bits (600), Expect = 4e-72
Identities = 91/247 (36%), Positives = 126/247 (51%), Gaps = 10/247 (4%)
Query: 55 EGSRGVDAPYAVIVFIHGESYEWNAGNHYDGSVLASSGHIIFVSINYRLGILGFLKTQTG 114
+ R P V+V+IHG SY GN YDGSVLAS G++I +++NYRLG+LGFL T
Sbjct: 122 DDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLASYGNVIVITVNYRLGVLGFLSTGDQ 181
Query: 115 HTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTP-SVKGLFH 173
GN+ + D+I AL W NI FGGDP RIT+FG G + VN++ L+ S KGLF
Sbjct: 182 AA-KGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQ 240
Query: 174 RVTLLSGSILSPWSFVHDPDSIRSNVADQLGCTLSD--NLAPCLRTHTLASLLQVNLTPP 231
R SG+ LS W+ P +A ++GC +SD L CL+ L+ ++ P
Sbjct: 241 RAIAQSGTALSSWAVSFQPAKYARILATKVGCNVSDTVELVECLQKKPYKELVDQDVQPA 300
Query: 232 RFLAGFGP----HLFTDPNVALEKAGDNFVTTPLMAGVVTTESYLNF-NANDIQYGFEED 286
R+ FGP + D L + G+ F+ +M GV E N D G
Sbjct: 301 RYHIAFGPVIDGDVIPDDPQILMEQGE-FLNYDIMLGVNQGEGLKFVENIVDSDDGVSAS 359
Query: 287 QRNRVLR 293
+ +
Sbjct: 360 DFDFAVS 366
Score = 32.4 bits (74), Expect = 0.29
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 348 DQIIKTYVRNAYVYHL--NEIFSTIRNEYTDWDKNNN 382
D + +V N Y Y + + TI+ YTDW +N
Sbjct: 362 DFAVSNFVDNLYGYPEGKDVLRETIKFMYTDWADRHN 398
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse,
membrane, nerve, muscle neurotransmitter degradation,
glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila
melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Length = 585
Score = 220 bits (562), Expect = 1e-66
Identities = 59/303 (19%), Positives = 113/303 (37%), Gaps = 24/303 (7%)
Query: 28 CREMNPGPLVWCASWVVGYSLEHGGRLEGSRGVDAPYAVIVFIHGESYEWNAGNH--YDG 85
G +H + ++++I+G + + Y+
Sbjct: 105 RLRHGRGANGGEHPNGKQADTDHLIHNGNPQNTTNGLPILIWIYGGGFMTGSATLDIYNA 164
Query: 86 SVLASSGHIIFVSINYRLGILGFLKTQTGHTQ------SGNWAVSDVIAALEWIKINIAS 139
++A+ G++I S YR+G GFL GN + D A+ W+K N +
Sbjct: 165 DIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHA 224
Query: 140 FGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFHRVTLLSGSILSPWSFVHDPDSIR--S 197
FGG+P +TLFG G++ VN L++P +GL R + SG++ +PWS + ++
Sbjct: 225 FGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMNAPWSHMTSEKAVEIGK 284
Query: 198 NVADQLGC------TLSDNLAPCLRTHTLASLLQVNLTPPRFLAG--FGP----HLFTDP 245
+ + C T ++ C+R+ ++ + P
Sbjct: 285 ALINDCNCNASMLKTNPAHVMSCMRSVDAKTISVQQWNSYSGILSFPSAPTIDGAFLPAD 344
Query: 246 NVALEKAGDNFVTTPLMAGVVTTESYLNFNANDIQYGFEEDQRNRVLRLTDDQRVQYLLS 305
+ L K + ++ G V E F D F++D + R + + +
Sbjct: 345 PMTLMKTA-DLKDYDILMGNVRDEGTY-FLLYDFIDYFDKDDATALPRDKYLEIMNNIFG 402
Query: 306 KLS 308
K +
Sbjct: 403 KAT 405
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase,
neurotransmitter cleavage, catalytic triad, alpha/beta
hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP:
c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A*
1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A
1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A*
1vxr_A* ...
Length = 537
Score = 218 bits (556), Expect = 4e-66
Identities = 73/262 (27%), Positives = 113/262 (43%), Gaps = 17/262 (6%)
Query: 61 DAPYAVIVFIHGESYEWNAGN--HYDGSVLASSGHIIFVSINYRLGILGFLKTQTGHTQS 118
V+V+I+G + + Y+G LA + ++ VS++YR+G GFL
Sbjct: 106 PKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAP 165
Query: 119 GNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFHRVTLL 178
GN + D AL+W+ NI FGGDP +T+FG G A V + +L+P + LF R L
Sbjct: 166 GNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQ 225
Query: 179 SGSILSPWSFVHDPDSIRS--NVADQLGCTLSDN--LAPCLRTHTLASLL----QVNLTP 230
SGS PW+ V + R + L C L+ + L CLR L+ V
Sbjct: 226 SGSPNCPWASVSVAEGRRRAVELGRNLNCNLNSDEELIHCLREKKPQELIDVEWNVLPFD 285
Query: 231 PRFLAGFGP----HLFTDPNVALEKAGDNFVTTPLMAGVVTTESYLNFNANDIQYGFEED 286
F F P F ++ +G+ F T ++ GV E F GF +D
Sbjct: 286 SIFRFSFVPVIDGEFFPTSLESMLNSGN-FKKTQILLGVNKDEGS--FFLLYGAPGFSKD 342
Query: 287 QRNRVLRLTDDQRVQYLLSKLS 308
+++ R V+ + +
Sbjct: 343 SESKISREDFMSGVKLSVPHAN 364
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase;
HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP:
c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A*
1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A*
2hrq_A* 3k9b_A* 1k4y_A*
Length = 542
Score = 214 bits (547), Expect = 9e-65
Identities = 78/253 (30%), Positives = 112/253 (44%), Gaps = 21/253 (8%)
Query: 61 DAPYAVIVFIHGESYEWNAGNHYDGSVLASSGHIIFVSINYRLGILGFLKTQTGHTQSGN 120
V+V+IHG A + YDG LA+ +++ V+I YRLGI GF T H+ GN
Sbjct: 112 KNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHS-RGN 170
Query: 121 WAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFHRVTLLSG 180
W D +AAL W++ NIASFGG+P +T+FG G V++++L+P K LFHR SG
Sbjct: 171 WGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESG 230
Query: 181 SILSPWSF-VHDPDSIRSNVADQLGCTLSDN--LAPCLRTHTLASLLQVNL--------- 228
L+ D + +A GC + + + CLR T LL+ L
Sbjct: 231 VALTSVLVKKGDVKPLAEQIAITAGCKTTTSAVMVHCLRQKTEEELLETTLKMKFLSLDL 290
Query: 229 --TPPRFLAGFGP----HLFTDPNVALEKAGDNFVTTPLMAGVVTTESYLNFNANDIQYG 282
P G L L+ NF T P M G+ E + Y
Sbjct: 291 QGDPRESQPLLGTVIDGMLLLKTPEELQAER-NFHTVPYMVGINKQEFGW-LIPMLMSYP 348
Query: 283 FEEDQRNRVLRLT 295
E Q ++ ++
Sbjct: 349 LSEGQLDQKTAMS 361
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod
glycosylated protein, hydrolase; HET: NAG FUC SCK SCU
P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A*
1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A*
2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A*
2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Length = 543
Score = 212 bits (541), Expect = 7e-64
Identities = 83/266 (31%), Positives = 120/266 (45%), Gaps = 21/266 (7%)
Query: 61 DAPYAVIVFIHGESYEWNAGNH--YDGSVLASSGHIIFVSINYRLGILGFLKTQTGHTQS 118
+P V+++I+G + A + YDG LA + VS+NYR+G GFL
Sbjct: 109 ASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAP 168
Query: 119 GNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFHRVTLL 178
GN + D AL+W++ NIA+FGGDP +TLFG GAA V + +L+ + LFHR L
Sbjct: 169 GNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQ 228
Query: 179 SGSILSPWSFVHDPDSIRS--NVADQLGCTL------SDNLAPCLRTHTLASLLQ----V 226
SG+ PW+ V ++ R +A +GC L CLRT L+ V
Sbjct: 229 SGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQDLVDHEWHV 288
Query: 227 NLTPPRFLAGFGP----HLFTDPNVALEKAGDNFVTTPLMAGVVTTESYLNFNANDIQYG 282
F F P +D AL GD F ++ GVV E F + G
Sbjct: 289 LPQESIFRFSFVPVVDGDFLSDTPEALINTGD-FQDLQVLVGVVKDEGSY-FLVYGVP-G 345
Query: 283 FEEDQRNRVLRLTDDQRVQYLLSKLS 308
F +D + + R V+ + + S
Sbjct: 346 FSKDNESLISRAQFLAGVRIGVPQAS 371
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC
MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A*
1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A*
3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A*
2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Length = 529
Score = 209 bits (535), Expect = 4e-63
Identities = 80/263 (30%), Positives = 121/263 (46%), Gaps = 19/263 (7%)
Query: 61 DAPYAVIVFIHGESYEWNAGN--HYDGSVLASSGHIIFVSINYRLGILGFLKTQTGHTQ- 117
V+++I+G ++ + YDG LA +I VS+NYR+G LGFL G+ +
Sbjct: 104 PKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL-ALPGNPEA 162
Query: 118 SGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFHRVTL 177
GN + D AL+W++ NIA+FGG+P +TLFG GAA V++ LL+P LF R L
Sbjct: 163 PGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAIL 222
Query: 178 LSGSILSPWSFVHDPDSIRS--NVADQLGCTLSDN--LAPCLRTHTLASLL----QVNLT 229
SGS +PW+ ++ N+A GC+ + + CLR +L V
Sbjct: 223 QSGSFNAPWAVTSLYEARNRTLNLAKLTGCSRENETEIIKCLRNKDPQEILLNEAFVVPY 282
Query: 230 PPRFLAGFGP----HLFTDPNVALEKAGDNFVTTPLMAGVVTTESYLNFNANDIQYGFEE 285
FGP TD L + G F T ++ GV E F GF +
Sbjct: 283 GTPLSVNFGPTVDGDFLTDMPDILLELG-QFKKTQILVGVNKDEGTA-FLVYGAP-GFSK 339
Query: 286 DQRNRVLRLTDDQRVQYLLSKLS 308
D + + R + ++ +S
Sbjct: 340 DNNSIITRKEFQEGLKIFFPGVS 362
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A
{Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A
1jmy_A
Length = 579
Score = 203 bits (518), Expect = 3e-60
Identities = 74/248 (29%), Positives = 109/248 (43%), Gaps = 28/248 (11%)
Query: 62 APYAVIVFIHGESYEWNAGNH--------YDGSVLASSGHIIFVSINYRLGILGFLKTQT 113
V+++I+G ++ A YDG +A+ G++I V+ NYR+G LGFL T
Sbjct: 96 HDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGD 155
Query: 114 GHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFH 173
+ GN+ + D A+ W+K NI +FGGDP +ITLFG G A V++ L+P KGL
Sbjct: 156 SNL-PGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIK 214
Query: 174 RVTLLSGSILSPWSFVHDPDSIRSNVADQLGCTLSD--NLAPCLRTHTLASLLQVNLT-- 229
R SG L PW+ DP +A+++GC + D +A CL+ +L
Sbjct: 215 RAISQSGVGLCPWAIQQDPLFWAKRIAEKVGCPVDDTSKMAGCLKITDPRALTLAYKLPL 274
Query: 230 -----PPRFLAGFGP----HLFTD-PNVALEKAGDNFVTTPLMAGVVTTESYLNFNANDI 279
P F P D P N +AG + +L F D+
Sbjct: 275 GSTEYPKLHYLSFVPVIDGDFIPDDPVNLYA----NAADVDYIAGTNDMDGHL-FVGMDV 329
Query: 280 QYGFEEDQ 287
Q
Sbjct: 330 PAINSNKQ 337
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase,
hydrolase; 1.58A {Geobacillus stearothermophilus} PDB:
2ogs_A
Length = 498
Score = 188 bits (479), Expect = 3e-55
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 17/255 (6%)
Query: 61 DAPYAVIVFIHGESYEWNAGNH--YDGSVLASSGHIIFVSINYRLGILGFL----KTQTG 114
V+ +IHG ++ + +G+ YDG+ A G ++ V+INYR+ + GFL
Sbjct: 96 GKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEA 155
Query: 115 HTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFHR 174
+ Q+GN + D +AAL W+K NIA+FGGDP IT+FG GAA V ++L P GLF R
Sbjct: 156 YAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRR 215
Query: 175 VTLLSGSILSPWSFVHDPDSIRSNVADQLGCTLSDNLAPCLRTHTLASLLQVNLTPPRFL 234
L SGS ++ + D+ G D L + LL+ L+ +
Sbjct: 216 AMLQSGSGSLLLRSPETAMAMTERILDKAGIRPGD--RERLLSIPAEELLRAALSLGPGV 273
Query: 235 AGFGPH-----LFTDPNVALEKAGDNFVTTPLMAGVVTTE-SYLNFNANDIQYGFEEDQR 288
+GP L P AL P++ GV E + E++
Sbjct: 274 M-YGPVVDGRVLRRHPIEALRYG--AASGIPILIGVTKDEYNLFTLTDPSWTKLGEKELL 330
Query: 289 NRVLRLTDDQRVQYL 303
+R+ R + +
Sbjct: 331 DRINREVGPVPEEAI 345
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase
directed evolution; 1.50A {Bacillus subtilis} SCOP:
c.69.1.1 PDB: 1c7j_A 1c7i_A
Length = 489
Score = 185 bits (471), Expect = 5e-54
Identities = 72/257 (28%), Positives = 105/257 (40%), Gaps = 19/257 (7%)
Query: 61 DAPYAVIVFIHGESYEWNAGNH--YDGSVLASSGHIIFVSINYRLGILGFLKTQTG-HTQ 117
V+V+IHG ++ AG+ YDGS LA+ G +I V++NYRLG GFL +
Sbjct: 94 SQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAY 153
Query: 118 SGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFHRVTL 177
S N + D AAL+W++ NI++FGGDP +T+FG G + +L P+ KGLF + +
Sbjct: 154 SDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIM 213
Query: 178 LSGSILSPWSFVHDPDSIRSNVADQLGCTLSDNLAPCLRTHTLASLL------QVNLTPP 231
SG+ + S + LG S L T LL ++
Sbjct: 214 ESGASRTMTK--EQAASTAAAFLQVLGINESQ--LDRLHTVAAEDLLKAADQLRIAEKEN 269
Query: 232 RFLAGFGP----HLFTDPNVALEKAGDNFVTTPLMAGVVTTESYLNFNANDIQYGFEEDQ 287
F F P + G PL+ G E YL F D +E
Sbjct: 270 IFQLFFQPALDPKTLPEEPEKSIAEGA-ASGIPLLIGTTRDEGYL-FFTPDSDVHSQETL 327
Query: 288 RNRVLRLTDDQRVQYLL 304
+ L +
Sbjct: 328 DAALEYLLGKPLAEKAA 344
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase;
HET: TFC; 2.70A {Trichoplusia NI}
Length = 551
Score = 184 bits (468), Expect = 3e-53
Identities = 62/254 (24%), Positives = 99/254 (38%), Gaps = 19/254 (7%)
Query: 53 RLEGSRGVDAPYAVIVFIHGESYEWNAGN-HYDGSVLASSGHIIFVSINYRLGILGFLKT 111
R + A V+VFIHG + + +G+ G S +I ++ NYRL + GFL
Sbjct: 104 RDAADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSL 163
Query: 112 QTGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGL 171
+ GN + D++ L+W++ N FGG P +TL G GAA +I+ L+ + GL
Sbjct: 164 NSTSV-PGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGL 222
Query: 172 FHRVTLLSGSILSPWSFVHDPDSIR--SNVADQLGCTLSDN--LAPCLRTHTLASLLQVN 227
F R L+SG+ S + + + +G T +D + L L + N
Sbjct: 223 FRRAILMSGTSSSAFFTTNPVFAQYINKLFVTNIGITATDPEEIHQKLIEMPAEKLNEAN 282
Query: 228 --LTPPRFLAGFGP----------HLFTDPNVALEKAGDNFVTTPLMAGVVTTESYLNFN 275
L L F P + L G PL+ G E +
Sbjct: 283 RFLLEQFGLTTFFPVVESPINGVTTILDGDPEQLIAKG-RGKHIPLIIGFTDAECEIFRR 341
Query: 276 ANDIQYGFEEDQRN 289
+ + + N
Sbjct: 342 QFEQIDIVSKIKEN 355
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H;
HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Length = 522
Score = 172 bits (439), Expect = 4e-49
Identities = 63/226 (27%), Positives = 95/226 (42%), Gaps = 19/226 (8%)
Query: 61 DAPYAVIVFIHGESYEWNAGNHYDGSVLASSGH--IIFVSINYRLGILGFLKTQTGHTQ- 117
+ V +FI G Y N+ +Y+G+ + + I+FV+ NYR+G LGFL ++
Sbjct: 99 QSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNG 158
Query: 118 SGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVK--GLFHRV 175
N + D AL W+K I FGGDP I + G GA V L K GLF
Sbjct: 159 DLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGA 218
Query: 176 TLLSGSILSPWSFVHDPDSIRSNVADQLGCTLSDNLAPCLRTHTLASLLQVNLTPPRFLA 235
+ S + + V + + + GC+ + + CLR +A++ + N P
Sbjct: 219 IVESSFWPTQRT-VSEMEFQFERFVNDTGCSSARDSLECLREQDIATIQKGNTGSPFPGG 277
Query: 236 G--------FGP----HLFTDPNVALEKAGDNFVTTPLMAGVVTTE 269
F P L D AG NF+ P++ G T E
Sbjct: 278 SSSPLPDWYFLPVTDGSLVPDELYNAFDAG-NFIKVPVLVGDDTDE 322
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester
acylh hydrolase; HET: NAG F23; 1.40A {Candida
cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A*
1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A*
1gz7_A*
Length = 534
Score = 167 bits (424), Expect = 5e-47
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 24/232 (10%)
Query: 61 DAPYAVIVFIHGESYEWNAGNHYDGSVLASSGH-----IIFVSINYRLGILGFLKTQTGH 115
A V+++I G +E + + + + + II V++NYR+ GFL
Sbjct: 111 GANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIK 170
Query: 116 TQ-SGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLL------TPSV 168
+ SGN + D ++W+ NIA FGGDP+++T+FG G+ V L+ T
Sbjct: 171 AEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKG 230
Query: 169 KGLFHRVTLLSGSILSPWSF-VHDPDSIRSNVADQLGCTLSDNLAPCLRTHTLASLLQVN 227
K LF + SG+++ + I GC + + CLR+ + +LL
Sbjct: 231 KPLFRAGIMQSGAMVPSDPVDGTYGNEIYDLFVSSAGCGSASDKLACLRSASSDTLLDAT 290
Query: 228 LTPPRFLA------GFGP----HLFTDPNVALEKAGDNFVTTPLMAGVVTTE 269
P FLA + P TD L + G + + P++ G E
Sbjct: 291 NNTPGFLAYSSLRLSYLPRPDGKNITDDMYKLVRDG-KYASVPVIIGDQNDE 341
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A
{Galactomyces geotrichum} SCOP: c.69.1.17
Length = 544
Score = 165 bits (420), Expect = 2e-46
Identities = 67/237 (28%), Positives = 99/237 (41%), Gaps = 29/237 (12%)
Query: 61 DAPYAVIVFIHGESYEWNAGNHYDGSVLASSGH-----IIFVSINYRLGILGFLKTQTGH 115
DA V+V+I+G ++ + + Y G+ ++FVSINYR G GFL
Sbjct: 119 DAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAIT 178
Query: 116 TQ-SGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLL------TPSV 168
+ + N + D LEW+ NIA+FGGDP ++ +FG GA V L+ T +
Sbjct: 179 AEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNG 238
Query: 169 KGLFHRVTLLSGSILSPWSF-VHDPDSIRSNVADQLGCTLSDNLA---PCLRTHTLASLL 224
K LFH L SG L PD + A GC S + CLR+ + + L
Sbjct: 239 KKLFHSAILQSGGPLPYHDSSSVGPDISYNRFAQYAGCDTSASANDTLECLRSKSSSVLH 298
Query: 225 QVN--------LTPPRFLAGFGP----HLFTDPNVALEKAGDNFVTTPLMAGVVTTE 269
GFGP ++ D L ++G + P ++G E
Sbjct: 299 DAQNSYDLKDLFGLLPQFLGFGPRPDGNIIPDAAYELFRSG-RYAKVPYISGNQEDE 354
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold,
hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A
{Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Length = 303
Score = 63.8 bits (155), Expect = 1e-11
Identities = 32/187 (17%), Positives = 60/187 (32%), Gaps = 29/187 (15%)
Query: 58 RGVDAPYAVIVFIHGESYEWNAGNHYDGSVLASSGH---IIFVSINYRLGILGFLKTQTG 114
+ VF+HG W + + ++Y L Q
Sbjct: 76 EKTTNQAPLFVFVHGGY--WQEMDMSMSCSIVGPLVRRGYRVAVMDYNLC------PQVT 127
Query: 115 HTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFHR 174
Q ++ L WI + +T GH GA L+ +L+ P+V R
Sbjct: 128 LEQ----LMTQFTHFLNWIFDYTE--MTKVSSLTFAGHXAGAHLLAQILMRPNVIT-AQR 180
Query: 175 VTLLSGSILSPWSFVHD----PDSIRSNVADQLGCTLSD--NLAPCLRTHTLASLLQVNL 228
++ I V+D + N + LG + +++P L +T + V
Sbjct: 181 SKMVWALIF--LCGVYDLRELSNLESVNPKNILGLNERNIESVSPMLWEYT---DVTVWN 235
Query: 229 TPPRFLA 235
+ ++
Sbjct: 236 STKIYVV 242
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural
genomics, joint center structural genomics, JCSG; HET:
EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Length = 277
Score = 61.4 bits (149), Expect = 7e-11
Identities = 37/219 (16%), Positives = 67/219 (30%), Gaps = 51/219 (23%)
Query: 59 GVDAPYAVIVFIHGESYEWNAGNHYD--GSVLASSGHIIFVSINYRLGILGFLKTQTGHT 116
Y +++ G + +++G + + ++G V +NY+L G
Sbjct: 30 ETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVV-LNYQLI--------VGDQ 80
Query: 117 QSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFHRVT 176
WA+ + A ++WI ++ D RI L G G +V + L R
Sbjct: 81 SVYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYH 140
Query: 177 LLSGSILSPWSFVHDPDSIRSNVADQLGCTLSDNLAPCLRTHTLASLL-----------Q 225
L D + LG + D A T + +
Sbjct: 141 L-------------DHYQGQHAAII-LGYPVIDLTAGFPTTSAARNQITTDARLWAAQRL 186
Query: 226 VN-LTPPRFLAGFGPHLFTDPNV----------ALEKAG 253
V + P F+ TD +V A+ +
Sbjct: 187 VTPASKPAFVW----QTATDESVPPINSLKYVQAMLQHQ 221
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2,
protein structure initiative; 3.20A {Lactococcus lactis
subsp}
Length = 276
Score = 53.7 bits (129), Expect = 2e-08
Identities = 16/105 (15%), Positives = 37/105 (35%), Gaps = 9/105 (8%)
Query: 57 SRGVDAPYAVIVFIHGESYEWNAGNHYD--GSVLASSGHIIFVSINYRLGILGFLKTQTG 114
+ + + I+ G Y+ + D + G+ + + +NY + +
Sbjct: 36 RQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLL-LNYTVM------NKGT 88
Query: 115 HTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALV 159
+ + + +V A I N + +P ++ L G G L
Sbjct: 89 NYNFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLA 133
>1vkh_A Putative serine hydrolase; structural genomics, joint center
structural genomics, JCSG, protein structure initiative,
PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae}
SCOP: c.69.1.32
Length = 273
Score = 52.3 bits (125), Expect = 6e-08
Identities = 18/115 (15%), Positives = 37/115 (32%), Gaps = 26/115 (22%)
Query: 61 DAPYAVIVFIHGESYEWNAGNHYDGSV---------LASSGHIIFVSINYRLGILGFLKT 111
+++IHG + WN + + + + SI YRL
Sbjct: 38 QNTREAVIYIHGGA--WNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLS------P 89
Query: 112 QTGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTP 166
+ + + + D ++ + + T I + GH GA + +L
Sbjct: 90 EITNPR----NLYDAVSNITRLVKE-----KGLTNINMVGHSVGATFIWQILAAL 135
>3bjr_A Putative carboxylesterase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Length = 283
Score = 50.6 bits (121), Expect = 2e-07
Identities = 22/101 (21%), Positives = 35/101 (34%), Gaps = 11/101 (10%)
Query: 61 DAPYAVIVFIHGESYEWNAGNHYD--GSVLASSGHIIFVSINYRLGILGFLKTQTGHTQS 118
I+ + G SY + A G+ F + Y L T
Sbjct: 47 QTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFY-LEYTLL--------TDQQPL 97
Query: 119 GNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALV 159
G V D+ A+ ++ + A + DP +IT G G +V
Sbjct: 98 GLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIV 138
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural
genomics CEN infectious disease, tuberculosis, O LIPW,
heroin esterase; 1.75A {Mycobacterium marinum}
Length = 317
Score = 50.7 bits (122), Expect = 3e-07
Identities = 27/112 (24%), Positives = 36/112 (32%), Gaps = 30/112 (26%)
Query: 58 RGVDAPYAVIVFIHGESYEWNAGN--HYDGSV--LASSGHIIFVSINYRL-------GIL 106
R P V+V+ H + GN LA VS++YRL
Sbjct: 79 RAAPTPAPVVVYCHAGG--FALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYPA-- 134
Query: 107 GFLKTQTGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAAL 158
A+ D I L W+ N G D R+ + G GA L
Sbjct: 135 ---------------ALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATL 171
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A
{Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A
1qz3_A
Length = 310
Score = 49.9 bits (120), Expect = 4e-07
Identities = 34/111 (30%), Positives = 44/111 (39%), Gaps = 28/111 (25%)
Query: 58 RGVDAPYAVIVFIHGESYEWNAGNH--YDGSV--LASSGHIIFVSINYRLG------ILG 107
GV+ PY +V+ HG S W G+ +D LA G + S++YRL
Sbjct: 68 EGVEPPYPALVYYHGGS--WVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPA-- 123
Query: 108 FLKTQTGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAAL 158
AV D AL+WI A F DP RI + G G L
Sbjct: 124 --------------AVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNL 160
>3h04_A Uncharacterized protein; protein with unknown function, structural
genomics, MCSG, PS protein structure initiative; 1.90A
{Staphylococcus aureus subsp}
Length = 275
Score = 49.5 bits (118), Expect = 5e-07
Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 22/115 (19%)
Query: 61 DAPYAVIVFIHGESYEWNAGNH--YDGSV--LASSGHIIFVSINYRLGILGFLKTQTGHT 116
VIV+IHG G + + + + + ++YRL +
Sbjct: 26 QPTKGVIVYIHGGG--LMFGKANDLSPQYIDILTEHYDL-IQLSYRLL--------PEVS 74
Query: 117 QSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGL 171
+ DV A+ + I+ I FG +GA L ++ + G+
Sbjct: 75 LDC--IIEDVYASFDAIQSQY-----SNCPIFTFGRSSGAYLSLLIARDRDIDGV 122
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP:
c.69.1.2 PDB: 1lzk_A
Length = 323
Score = 49.2 bits (118), Expect = 8e-07
Identities = 26/112 (23%), Positives = 38/112 (33%), Gaps = 30/112 (26%)
Query: 58 RGVDAPYAVIVFIHGESYEWNAGN--HYDGSV--LASSGHIIFVSINYRL-------GIL 106
P V+++IHG + G D +A ++ YRL G
Sbjct: 73 DNTAGPVPVLLWIHGGG--FAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPG-- 128
Query: 107 GFLKTQTGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAAL 158
V+D AAL +I + G DP+RI + G G L
Sbjct: 129 ---------------PVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGL 165
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 50.2 bits (119), Expect = 9e-07
Identities = 64/396 (16%), Positives = 111/396 (28%), Gaps = 146/396 (36%)
Query: 104 GILGFLKTQTGHTQSGNWAVSDVIAALE----------WIKI------------------ 135
G+LG KT W DV + + W+ +
Sbjct: 157 GVLGSGKT---------WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207
Query: 136 ----NIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFHRVTLLSGSILSPWSFVHD 191
N S + I L H A L ++ P + LL +L V +
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP------YENCLL---VLLN---VQN 255
Query: 192 PDSIRSNVADQLGC-TL--------SDNLAPCLRTHTLASLLQVNLTPPRFLAGFGPHLF 242
+ A L C L +D L+ TH + LTP + +L
Sbjct: 256 AKAWN---AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312
Query: 243 TD----PNVALEKAGDNFVTTPLMAGVV---------TTESYLNFNANDIQYGFE----- 284
P L T P ++ T +++ + N + + E
Sbjct: 313 CRPQDLPREVLT-------TNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365
Query: 285 ---EDQRNR----------------VLRL----TDDQRVQYLLSKLSGSALTVC------ 315
+ R +L L V +++KL +L
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST 425
Query: 316 SGIPPI-------GSNYQTIWNLLVDRYEDKRA-----LASSYIDQIIKTYVRNAYVYHL 363
IP I N + +VD Y + L Y+DQ +++ +HL
Sbjct: 426 ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI----GHHL 481
Query: 364 NEI-----FSTIRNEYTDWD------KNNNRLWSGR 388
I + R + D+ ++++ W+
Sbjct: 482 KNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNAS 517
Score = 41.0 bits (95), Expect = 6e-04
Identities = 40/256 (15%), Positives = 77/256 (30%), Gaps = 62/256 (24%)
Query: 147 ITLFGHDTGA---ALVNIVLLTPSVKGLFHRVTLLSGSILSPW-SF--VHDPDSI----- 195
+ + G G+ + V L+ V+ I W + + P+++
Sbjct: 153 VLIDG-VLGSGKTWVALDVCLSYKVQCKM------DFKIF--WLNLKNCNSPETVLEMLQ 203
Query: 196 -RSNVADQLGCTLSDNLA-PCLRTHTLASLLQVNLTPPRFLAGFGPH--LFTDPNVALEK 251
D + SD+ + LR H++ + L+ L + + L NV K
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY-----ENCLLVLL-NVQNAK 257
Query: 252 AGDNF---VTTPLMAGVVTTESYLNFNANDIQYGFEEDQRNRVLRLTDDQRVQYLLSKLS 308
A + F ++TT + + + LT D+ LL L
Sbjct: 258 AWNAFNLSCKI-----LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312
Query: 309 GSALT----VCSGIPP----IG---SNYQTIWNLLVDRYED------KRALASSYIDQII 351
V + P I + W D ++ + SS ++ +
Sbjct: 313 CRPQDLPREVLTTNPRRLSIIAESIRDGLATW----DNWKHVNCDKLTTIIESS-LNVLE 367
Query: 352 KTYVRNAYVYHLNEIF 367
R + L +F
Sbjct: 368 PAEYRKMFDR-L-SVF 381
Score = 34.8 bits (79), Expect = 0.058
Identities = 23/165 (13%), Positives = 50/165 (30%), Gaps = 48/165 (29%)
Query: 218 HTLASLLQVNLTPPRFLAGFGPHLFTDPNVALEKAGDNFVTTPLMAGVVTTESYLNFNAN 277
+ +L V F+ F D + + +++ E +
Sbjct: 16 YQYKDILSVFE--DAFVDNF------DCKDVQD----------MPKSILSKEEI-----D 52
Query: 278 DIQYGFEEDQRNRVLRLTD------DQRVQYLLSKLSGSALTVCSGIPPIGSNYQTIWNL 331
I +D + LRL ++ VQ + L NY+ + +
Sbjct: 53 HI-IM-SKDAVSGTLRLFWTLLSKQEEMVQKFV----EEVLR---------INYKFLMSP 97
Query: 332 LVDRYEDKRALASSYIDQIIKTYVRNAYV--YHLN--EIFSTIRN 372
+ + YI+Q + Y N Y+++ + + +R
Sbjct: 98 IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ 142
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold,
structural genomics, joint cente structural genomics,
JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Length = 262
Score = 48.0 bits (114), Expect = 2e-06
Identities = 22/109 (20%), Positives = 32/109 (29%), Gaps = 21/109 (19%)
Query: 61 DAPYAVIVFIHGESYEWNAGNHYDGSVLAS---SGHIIFVSINYRLGILGFLKTQTGHTQ 117
P + VF+HG W A + S LA S +Y L + ++
Sbjct: 60 GTPVGLFVFVHGGY--WMAFDKSSWSHLAVGALSKGWAVAMPSYELC------PEVRISE 111
Query: 118 SGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTP 166
+ A+ I L GH G LV +L
Sbjct: 112 ----ITQQISQAVTAA------AKEIDGPIVLAGHSAGGHLVARMLDPE 150
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary
alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A
3zwq_A
Length = 313
Score = 47.7 bits (114), Expect = 3e-06
Identities = 24/108 (22%), Positives = 37/108 (34%), Gaps = 28/108 (25%)
Query: 61 DAPYAVIVFIHGESYEWNAGNH--YDGSV--LASSGHIIFVSINYRLG------ILGFLK 110
+V+ HG + G+ +D LA+ + VS++YRL
Sbjct: 73 GERLPAVVYYHGGG--FVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEHKFPA----- 125
Query: 111 TQTGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAAL 158
AV D A +W+ N G D +I + G G L
Sbjct: 126 -----------AVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNL 162
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme,
hydrolase, HSL, alpha/beta hydrolase fold; 2.3A
{Uncultured archaeon}
Length = 311
Score = 47.6 bits (114), Expect = 3e-06
Identities = 26/108 (24%), Positives = 39/108 (36%), Gaps = 28/108 (25%)
Query: 61 DAPYAVIVFIHGESYEWNAGNH--YDGSV--LASSGHIIFVSINYRLG------ILGFLK 110
A +++ HG + G+ +D L+ + VS++YRL
Sbjct: 70 AAGLPAVLYYHGGG--FVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYKFPT----- 122
Query: 111 TQTGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAAL 158
AV D AAL+W+ G DP RI + G G L
Sbjct: 123 -----------AVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNL 159
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics,
JOIN for structural genomics, JCSG; 2.69A {Xanthomonas
campestris PV}
Length = 290
Score = 47.1 bits (112), Expect = 4e-06
Identities = 22/134 (16%), Positives = 39/134 (29%), Gaps = 32/134 (23%)
Query: 50 HGGRLEGSRGVDAPYAVIVFIHGESYEWNAGNHYDGSV----LASSGHIIFVSINYRLGI 105
L G+ ++F+HG G+ + V G I + R
Sbjct: 14 GQDELSGTLLTPTGMPGVLFVHG-----WGGSQHHSLVRAREAVGLGCICMT-FDLR--- 64
Query: 106 LGFLKTQTGHTQSGNW--------AVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAA 157
GH + + D+ AA + + + D I + G G
Sbjct: 65 --------GHEGYASMRQSVTRAQNLDDIKAAYDQLA---SLPYVDAHSIAVVGLSYGGY 113
Query: 158 LVNIVLLTPSVKGL 171
L ++ V+ L
Sbjct: 114 LSALLTRERPVEWL 127
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO
PSI-2, protein structure initiative, midwest center for
STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Length = 274
Score = 46.8 bits (111), Expect = 5e-06
Identities = 20/198 (10%), Positives = 47/198 (23%), Gaps = 36/198 (18%)
Query: 58 RGVDAPYAVIVFIHGESYEWNAGNHYDGSV--LASSGHIIFVSINYRLGILGFLKTQTGH 115
P +V++HG + + + L +S ++++Y L
Sbjct: 21 PTTTEPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLL------------ 68
Query: 116 TQSGNWA--------VSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPS 167
A + + + + L G G L+ +
Sbjct: 69 ------APNTKIDHILRTLTETFQLL----NEEIIQNQSFGLCGRSAGGYLMLQLTKQLQ 118
Query: 168 VKGLFHRVTLLSGSILSPWSFVHDPDSIRSNVADQLGCTLSDNLAPCLRTHTLASLLQVN 227
L + + ++ + R + + + L +
Sbjct: 119 TLNLTPQFLVN----FYGYTDLEFIKEPRKLLKQAISAKEIAAIDQTKPVWDDPFLSRYL 174
Query: 228 LTPPRFLAGFGPHLFTDP 245
L PH + P
Sbjct: 175 LYHYSIQQALLPHFYGLP 192
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine
structural genomics, center for structural genomics of
INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella
typhimurium}
Length = 326
Score = 46.5 bits (111), Expect = 7e-06
Identities = 17/110 (15%), Positives = 34/110 (30%), Gaps = 32/110 (29%)
Query: 61 DAPYAVIVFIHGESYEWNAGNH--YDGSV--LASSGHIIFVSINYRLGILGFLKTQTGHT 116
A + ++HG + GN +D + LA + I+Y L
Sbjct: 84 PTSQATLYYLHGGG--FILGNLDTHDRIMRLLARYTGCTVIGIDYSL------------- 128
Query: 117 QSGNWA--------VSDVIAALEWIKINIASFGGDPTRITLFGHDTGAAL 158
+ + + +A + + + + +I G GA L
Sbjct: 129 -----SPQARYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAML 173
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE;
2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Length = 311
Score = 46.1 bits (110), Expect = 9e-06
Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 28/108 (25%)
Query: 61 DAPYAVIVFIHGESYEWNAGNH--YDGSV--LASSGHIIFVSINYRLG------ILGFLK 110
V+V+ HG + + +D +A + VS++YRL
Sbjct: 76 KPDSPVLVYYHGGG--FVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPA----- 128
Query: 111 TQTGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAAL 158
AV D A +W+ N DP++I + G G L
Sbjct: 129 -----------AVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNL 165
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 46.6 bits (110), Expect = 1e-05
Identities = 68/319 (21%), Positives = 99/319 (31%), Gaps = 121/319 (37%)
Query: 61 DAPYAVIVFIHG-ESYEW--NAGNHYDGSVLAS---SGHIIFVS--INYR--LGILGF-- 108
A VF G EW N N D L S S +I V +Y +LGF
Sbjct: 201 TTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTP 260
Query: 109 ------LKTQTGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIV 162
LK TGH+Q ++ A+ IA D+ + V
Sbjct: 261 GELRSYLKGATGHSQ-------GLVTAVA-----IAE------------TDSWESFFVSV 296
Query: 163 LLTPSVKGLFH---RVTLLSGSILSPWSFVHD--------PD---SIRSNVADQLGCTLS 208
+ LF R + P S + D P SI + +Q+ ++
Sbjct: 297 RKA--ITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVN 354
Query: 209 D-N--LAPCLRTHTLASLLQVN------LT-PPRFLAGFGPHLFTDPNVALEK----AGD 254
N L SL VN ++ PP+ L G N+ L K +G
Sbjct: 355 KTNSHLPA--GKQVEISL--VNGAKNLVVSGPPQSLYGL--------NLTLRKAKAPSGL 402
Query: 255 N----------------F--VTTP----LMAGVVTT------ESYLNFNANDIQ---YGF 283
+ F V +P L+ ++ ++FNA DIQ Y
Sbjct: 403 DQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDT 462
Query: 284 E--EDQR----NRVLRLTD 296
D R + R+ D
Sbjct: 463 FDGSDLRVLSGSISERIVD 481
Score = 38.1 bits (88), Expect = 0.005
Identities = 40/210 (19%), Positives = 63/210 (30%), Gaps = 55/210 (26%)
Query: 175 VTLLSGSILSPWSFVHDPDSIRSNVADQL----GCTL---SDNLAPCLRTHTLASLLQVN 227
+TL GS+ V P + A QL L ++ A T A L+
Sbjct: 9 LTLSHGSLEHVLL-V--PTASFFI-ASQLQEQFNKILPEPTEGFAADDEPTTPAELVG-- 62
Query: 228 LTPPRFLAGFGPHLFTDPNVALEKAGDNFVTTPLMAGVVT--TESYLNFNANDIQ---YG 282
+FL + V K G ++ +T YL NDI
Sbjct: 63 ----KFLG------YVSSLVEPSKVGQ---FDQVLNLCLTEFENCYLE--GNDIHALAAK 107
Query: 283 FEEDQRNRVLRLTDDQRVQYL--------LSKLSGSAL--TVCSGIPPI-------GSN- 324
++ +++ + + K S SAL V G + G+
Sbjct: 108 LLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTD 167
Query: 325 -YQTIWNLLVDRYEDKRALASSYIDQIIKT 353
Y + L D Y+ L I +T
Sbjct: 168 DY---FEELRDLYQTYHVLVGDLIKFSAET 194
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center
for structural genomics, JCSG, protein structure INI
PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Length = 223
Score = 43.3 bits (102), Expect = 4e-05
Identities = 19/115 (16%), Positives = 40/115 (34%), Gaps = 7/115 (6%)
Query: 51 GGRLEGSRGV-DAPYAVIVFIHGE-SYEWNAGNHYDGSVLASSGHIIFVSINYR-LGILG 107
+L+G+ + + +++F HG S ++ N Y VL +G + I+
Sbjct: 21 EVKLKGNLVIPNGATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLL-IDLLTQEEEE 79
Query: 108 FLKTQTGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIV 162
S ++ A +W+ + ++ FG TG +
Sbjct: 80 IDLRTRHLRFDIGLLASRLVGATDWLT---HNPDTQHLKVGYFGASTGGGAALVA 131
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A,
alpha/beta hydrolase family; 1.85A {Bacillus subtilis}
SCOP: c.69.1.2
Length = 361
Score = 44.0 bits (104), Expect = 5e-05
Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 23/100 (23%)
Query: 58 RGVDAPYAVIVFIHGESYEWNAGNHYDGS------VLASSGHIIFVSINYRLGILGFLKT 111
GV+ +V+ HG + LA++G ++ V +++R
Sbjct: 103 AGVEGVLPGLVYTHGGG--MTILTTDNRVHRRWCTDLAAAGSVV-VMVDFRNA------- 152
Query: 112 QTGHTQSGNW----AVSDVIAALEWIKINIASFGGDPTRI 147
T G+ V D +AA+ W+ + S G +
Sbjct: 153 ---WTAEGHHPFPSGVEDCLAAVLWVDEHRESLGLSGVVV 189
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR
structure initiative, PSI, joint center for structural
GENO hydrolase; 2.10A {Thermotoga maritima} SCOP:
c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Length = 337
Score = 41.8 bits (98), Expect = 2e-04
Identities = 30/147 (20%), Positives = 43/147 (29%), Gaps = 31/147 (21%)
Query: 58 RGVDAPYAVIVFIHGESYEWNAGNHYDGSVLASSGHIIFVSINYR-------------LG 104
+ + +V G Y G +D S G+I FV ++ R
Sbjct: 89 KLEEEKLPCVVQYIG--YNGGRGFPHDWLFWPSMGYICFV-MDTRGQGSGWLKGDTPDYP 145
Query: 105 ILGFLKTQTGHTQSGNW---------AVSDVIAALEWIKINIASFGG-DPTRITLFGHDT 154
G G +D + A+E ASF D RI + G
Sbjct: 146 EGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEA----AASFPQVDQERIVIAGGSQ 201
Query: 155 GAALVNIVL-LTPSVKGLFHRVTLLSG 180
G + V L+ K L V L
Sbjct: 202 GGGIALAVSALSKKAKALLCDVPFLCH 228
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic,
dimer, archaea, R267G, hydro; 1.65A {Sulfolobus
tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Length = 323
Score = 41.5 bits (98), Expect = 2e-04
Identities = 29/133 (21%), Positives = 44/133 (33%), Gaps = 44/133 (33%)
Query: 61 DAPYAVIVFIHGESYEWNAGNH--YDGSV--LASSGHIIFVSINYRLG------ILGFLK 110
PY V+V+ HG + G+ YD + +S + +S++YRL
Sbjct: 87 QGPYGVLVYYHGGG--FVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPA----- 139
Query: 111 TQTGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFG---------------HDTG 155
AV D AL+W+ N F I + G
Sbjct: 140 -----------AVVDSFDALKWVYNNSEKF-NGKYGIAVGGDSAGGNLAAVTAILSKKEN 187
Query: 156 AALVNIVLLTPSV 168
L VL+ P+V
Sbjct: 188 IKLKYQVLIYPAV 200
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7;
2.10A {Thermoanaerobacterium SP}
Length = 346
Score = 41.7 bits (98), Expect = 3e-04
Identities = 23/156 (14%), Positives = 43/156 (27%), Gaps = 31/156 (19%)
Query: 61 DAPYAVIVFIHGESYEWNAGNHYDGSVLASSGHIIFVSINYR-LGILGFLKTQTGHTQSG 119
+ + ++ HG Y N+G+ D ++G + ++ R G
Sbjct: 105 EGKHPALIRFHG--YSSNSGDWNDKLNYVAAGFTVVA-MDVRGQGGQSQDVGGVTGNTLN 161
Query: 120 NW----------------AVSDVIAALEWIKINIASFGG-DPTRITLFGHDTGAALVNIV 162
D + + D R+ + G G L
Sbjct: 162 GHIIRGLDDDADNMLFRHIFLDTAQLAGI----VMNMPEVDEDRVGVMGPSQGGGLSLAC 217
Query: 163 L-LTPSVKGLFHRVTLLSGSILSPWSFVHDPDSIRS 197
L P V+ + LS + V D D ++
Sbjct: 218 AALEPRVRKVV-----SEYPFLSDYKRVWDLDLAKN 248
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase,
gibberellin signaling pathway, hydrolase, nucleus,
hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp}
PDB: 3ed1_A*
Length = 365
Score = 40.1 bits (94), Expect = 8e-04
Identities = 24/114 (21%), Positives = 32/114 (28%), Gaps = 34/114 (29%)
Query: 53 RLEGSRGVDAPYAVIVFIHG-----ESYEWNAGNHYDGSV--LASSGHIIFVSINYRLG- 104
P+ VI+F HG S YD + VS+NYR
Sbjct: 101 EFLTDAPAAEPFPVIIFFHGGSFVHSSASSTI---YDSLCRRFVKLSKGVVVSVNYRRAP 157
Query: 105 -----ILGFLKTQTGHTQSGNWAVSDVIAALEWIKIN--IASFGGDPTRITLFG 151
A D AL+W+ + S G R+ L G
Sbjct: 158 EHRYPC----------------AYDDGWTALKWVMSQPFMRSGGDAQARVFLSG 195
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Length = 251
Score = 38.9 bits (91), Expect = 0.001
Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 36/135 (26%)
Query: 52 GRLEGSRGVDAPYAVIVFIHG--ESYEWNAGNHYDGSVLASSGHIIFVSINYRLGILGFL 109
L+ + + + IHG E L G + + +
Sbjct: 15 AYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQ-ETLNEIG-VATLRADMY------- 65
Query: 110 KTQTGHTQS-GNWA-------VSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNI 161
GH +S G + +++++A +++ K T I + GH G
Sbjct: 66 ----GHGKSDGKFEDHTLFKWLTNILAVVDYAKK-----LDFVTDIYMAGHSQGGL---S 113
Query: 162 VLLT-----PSVKGL 171
V+L +K L
Sbjct: 114 VMLAAAMERDIIKAL 128
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia
eriantha} PDB: 2o7v_A
Length = 338
Score = 38.9 bits (91), Expect = 0.002
Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 38/124 (30%)
Query: 55 EGSRGVDAPYAVIVFIHG-----ESYEWNAGNHYDGSV--LASSGHIIFVSINYRLG--- 104
+ A ++V+ HG S + +A ++ S++YRL
Sbjct: 74 RHALYNSAKLPLVVYFHGGGFILFSAASTI---FHDFCCEMAVHAGVVIASVDYRLAPEH 130
Query: 105 ---ILGFLKTQTGHTQSGNWAVSDVIAALEWIKINIASF---GGDPTRITLFGHDTGAAL 158
A D + AL+WIK + + D + + G G
Sbjct: 131 RLPA----------------AYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGG-- 172
Query: 159 VNIV 162
NI
Sbjct: 173 -NIA 175
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase,
cinnamoyl/Fe esterase, hydroxycinammates, extracellular;
HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A*
3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Length = 270
Score = 38.6 bits (90), Expect = 0.002
Identities = 28/143 (19%), Positives = 44/143 (30%), Gaps = 32/143 (22%)
Query: 50 HGGRLEGS--RGVDAPYAVIVFIHG--ESYEWNAGNHYDGSVLASSGHIIFVSINYRLGI 105
G +L G+ Y + + HG + + S L I V ++
Sbjct: 30 DGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLREIANS-LRDEN-IASVRFDFN--- 84
Query: 106 LGFLKTQTGHTQS-GNWA-------VSDVIAALEWIKINIASFGGDPTRITLFGHDTGAA 157
GH S G + + D A L ++K I L GH G
Sbjct: 85 --------GHGDSDGKFENMTVLNEIEDANAILNYVKT-----DPHVRNIYLVGHAQGGV 131
Query: 158 LVNIVLLTPSVKGLFHRVTLLSG 180
+ +L L +V LL+
Sbjct: 132 VA--SMLAGLYPDLIKKVVLLAP 152
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 1.60A {Thermus thermophilus} SCOP:
c.69.1.27
Length = 238
Score = 38.2 bits (88), Expect = 0.003
Identities = 22/164 (13%), Positives = 41/164 (25%), Gaps = 12/164 (7%)
Query: 61 DAPYAVIVFIHG--ESYEWNAGNHYDGSVLASSGHIIFVSINYRL-GILGFLKTQTGHTQ 117
+AP A+++ +HG S E A G + ++ + G + +
Sbjct: 21 EAPKALLLALHGLQGSKEHILALLP---GYAERG-FLLLAFDAPRHGEREGPPPSSKSPR 76
Query: 118 SGNWAVSDVIAALEWIKINIASFG-GDPTRITLFGHDTGAALVNIVLLTPSVKGLFHRVT 176
+ E + + L G GA + +++L V
Sbjct: 77 YVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGF---RPRGVL 133
Query: 177 LLSGSILSPWSFVHDPDSIRSNVADQLGCTLSDNLAPCLRTHTL 220
GS P V + L
Sbjct: 134 AFIGS-GFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLL 176
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine
esterase; 2.20A {Homo sapiens}
Length = 342
Score = 37.0 bits (86), Expect = 0.007
Identities = 31/181 (17%), Positives = 61/181 (33%), Gaps = 50/181 (27%)
Query: 60 VDAPYAVIVFIHGESYEWNAGNH---YD--GSVLASSGHIIFVSINYRLGILGFLKT--Q 112
P A+I HG AG H Y+ +L ++ + ++ G ++ +
Sbjct: 56 TGTPKALIFVSHG------AGEHSGRYEELARMLMGLD-LLVFAHDHV----GHGQSEGE 104
Query: 113 TGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALV------------N 160
+ V DV+ ++ ++ + G P + L GH G A+
Sbjct: 105 RMVVSDFHVFVRDVLQHVDSMQ---KDYPGLP--VFLLGHSMGGAIAILTAAERPGHFAG 159
Query: 161 IVLLTPSVKG---LFHRVTLLSGSILSP----WSFV--------HDPDSIRSNVADQLGC 205
+VL++P V +L+ +L+ S + + +D L C
Sbjct: 160 MVLISPLVLANPESATTFKVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLIC 219
Query: 206 T 206
Sbjct: 220 R 220
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold,
2-arachidonyl-glycerol, M associated, hydrolase,
hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A
{Homo sapiens} PDB: 3jw8_A 3jwe_A*
Length = 303
Score = 36.9 bits (86), Expect = 0.008
Identities = 31/181 (17%), Positives = 61/181 (33%), Gaps = 50/181 (27%)
Query: 60 VDAPYAVIVFIHGESYEWNAGNH---YD--GSVLASSGHIIFVSINYRLGILGFLKT--Q 112
P A+I HG AG H Y+ +L ++ + ++ G ++ +
Sbjct: 38 TGTPKALIFVSHG------AGEHSGRYEELARMLMGLD-LLVFAHDHV----GHGQSEGE 86
Query: 113 TGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALV------------N 160
+ V DV+ ++ ++ + G P + L GH G A+
Sbjct: 87 RMVVSDFHVFVRDVLQHVDSMQ---KDYPGLP--VFLLGHSMGGAIAILTAAERPGHFAG 141
Query: 161 IVLLTPSVKG---LFHRVTLLSGSILSP----WSFV--------HDPDSIRSNVADQLGC 205
+VL++P V +L+ +L+ S + + +D L C
Sbjct: 142 MVLISPLVLANPESATTFKVLAAKVLNSVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLIC 201
Query: 206 T 206
Sbjct: 202 R 202
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor,
gibberellin, gibberellin signaling pathway, hydrolase,
nucleus, receptor, developmental protein; HET: GA3;
1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Length = 351
Score = 37.0 bits (86), Expect = 0.009
Identities = 24/109 (22%), Positives = 31/109 (28%), Gaps = 34/109 (31%)
Query: 66 VIVFIHG-----ESYEWNAGNHYDGSV--LASSGHIIFVSINYRLG------ILGFLKTQ 112
VI+F HG S YD L + VS+NYR
Sbjct: 115 VILFFHGGSFAHSSANSAI---YDTLCRRLVGLCKCVVVSVNYRRAPENPYPC------- 164
Query: 113 TGHTQSGNWAVSDVIAALEWIKIN--IASFGGDPTRITLFGHDTGAALV 159
A D AL W+ + S I L G +G +
Sbjct: 165 ---------AYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIA 204
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic
DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38
PDB: 2gzr_A*
Length = 278
Score = 36.5 bits (84), Expect = 0.011
Identities = 12/45 (26%), Positives = 15/45 (33%), Gaps = 3/45 (6%)
Query: 138 ASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFHRVTLLSGSI 182
D R L+GH G V L+ S F S S+
Sbjct: 134 QGLNIDRQRRGLWGHSYGGLFVLDSWLSSS---YFRSYYSASPSL 175
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta
propeller, hydrolase, oligop SIZE selectivity; HET: GOL;
1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A*
1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Length = 582
Score = 36.3 bits (84), Expect = 0.014
Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 22/98 (22%)
Query: 61 DAPYAVIVFIHG-----ESYEWNAGNHYDGSVLASSGHIIFVSINYRLGILGFLKT--QT 113
P +V +HG +S W+ LA++G + NYR G G+ +
Sbjct: 357 PTPGPTVVLVHGGPFAEDSDSWDTFAAS----LAAAGFHVV-MPNYR-GSTGYGEEWRLK 410
Query: 114 GHTQSGNWAVSDVIAALEWI-------KINI--ASFGG 142
+ DV AA W ++ I S+GG
Sbjct: 411 IIGDPCGGELEDVSAAARWARESGLASELYIMGYSYGG 448
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Length = 305
Score = 36.1 bits (83), Expect = 0.015
Identities = 16/133 (12%), Positives = 30/133 (22%), Gaps = 23/133 (17%)
Query: 45 GYSLEHGGRLEGSRGVDAPYAVIVFIHGESYEWNAGNHYD----GSVLASSGHIIFVSIN 100
G L H V I+ G A L+++G +
Sbjct: 17 GQEL-HVWETPPKENVPFKNNTILIASG-----FARRMDHFAGLAEYLSTNG-FHVFRYD 69
Query: 101 YRLGILGFLKTQTGHTQSGNWA--VSDVIAALEWIKINIASFGGDPTRITLFGHDTGAAL 158
+ +G + + W++ I L A +
Sbjct: 70 SL----HHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTK------GTQNIGLIAASLSARV 119
Query: 159 VNIVLLTPSVKGL 171
V+ + L
Sbjct: 120 AYEVISDLELSFL 132
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured
bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A*
3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Length = 322
Score = 35.7 bits (83), Expect = 0.018
Identities = 31/149 (20%), Positives = 56/149 (37%), Gaps = 38/149 (25%)
Query: 62 APYAVIVFIHGESYEWNAGNHYDGSV--LASSGHIIFVSINYRLGILGFLKTQTGHTQSG 119
I+++HG Y + N + V ++ + + ++YRL
Sbjct: 78 QAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRL---------------- 121
Query: 120 NWA--------VSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGL 171
A V D +AA W + G P +++ G G LV VL++ +GL
Sbjct: 122 --APEHPFPAAVEDGVAAYRW----LLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQGL 175
Query: 172 FHRVTLLSGSIL-SPWS-FVHDPDSIRSN 198
+ + +I SPW+ DS ++
Sbjct: 176 ----PMPASAIPISPWADMTCTNDSFKTR 200
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha
sandwich, structural genomics, PSI-2; 1.83A {Bordetella
parapertussis 12822}
Length = 304
Score = 35.0 bits (79), Expect = 0.035
Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 13/136 (9%)
Query: 59 GVDAPYAVIVFIHGESYEWNAGNHYDG-SVLASSGHIIFVSINYRLGI--------LGFL 109
G V+V HG N ++ D A ++ V+ + I G
Sbjct: 49 GYTPDRPVVVVQHG--VLRNGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRA 106
Query: 110 KTQTGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVK 169
T G+ + + ++A + + A+ D ++ LFGH G V+ ++ +
Sbjct: 107 FTAAGNPRHVDGWTYALVARV--LANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHA 164
Query: 170 GLFHRVTLLSGSILSP 185
G P
Sbjct: 165 PFHAVTAANPGWYTLP 180
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces
morookaensis} PDB: 3azp_A 3azq_A
Length = 662
Score = 35.2 bits (81), Expect = 0.039
Identities = 21/115 (18%), Positives = 34/115 (29%), Gaps = 16/115 (13%)
Query: 61 DAPYAVIVFIHG-----ESYEWNAGNHYDGSVLASSGHIIFVSINYRLGILGFLK--TQT 113
D +V HG + Y S G + +NY G G+ + +
Sbjct: 421 DELPPYVVMAHGGPTSRVPAVLDLDVAY----FTSRGIGVA-DVNYG-GSTGYGRAYRER 474
Query: 114 GHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSV 168
+ G V D A + D R+ + G G L++ V
Sbjct: 475 LRGRWGVVDVEDCAAVATAL---AEEGTADRARLAVRGGSAGGWTAASSLVSTDV 526
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP:
c.69.1.16
Length = 262
Score = 34.3 bits (78), Expect = 0.045
Identities = 18/108 (16%), Positives = 33/108 (30%), Gaps = 30/108 (27%)
Query: 61 DAPYAVIVFIHG-----ESYEWNAGNHYDGSVLASSGHIIFVSINYRLGILGFLKTQTGH 115
D + +V G S W LAS G ++F
Sbjct: 51 DGTFGAVVISPGFTAYQSSIAWLGPR------LASQGFVVFTI---------------DT 89
Query: 116 TQSGNWA---VSDVIAALEWIKINIASFGG-DPTRITLFGHDTGAALV 159
+ + +++AL+++ + D TR+ + GH G
Sbjct: 90 NTTLDQPDSRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGS 137
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured
bacterium} PDB: 3dnm_A
Length = 322
Score = 33.8 bits (78), Expect = 0.075
Identities = 31/161 (19%), Positives = 49/161 (30%), Gaps = 38/161 (23%)
Query: 50 HGGRLEGSRGVDAPYAVIVFIHGESYEWNAGNHYDG--SVLASSGHIIFVSINYRLGILG 107
G A A I++ HG Y + + + + LA S++YRL
Sbjct: 66 GGVPCIRQATDGAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRL---- 121
Query: 108 FLKTQTGHTQSGNWA--------VSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALV 159
A V D +AA + G RI + G G L
Sbjct: 122 --------------APENPFPAAVDDCVAAYRA----LLKTAGSADRIIIAGDSAGGGLT 163
Query: 160 NIVLLTPSVKGLFHRVTLLSGSIL-SPWS-FVHDPDSIRSN 198
+L GL + +G ++ SP+ S +
Sbjct: 164 TASMLKAKEDGL----PMPAGLVMLSPFVDLTLSRWSNSNL 200
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas
mendocina}
Length = 258
Score = 33.5 bits (76), Expect = 0.078
Identities = 17/139 (12%), Positives = 40/139 (28%), Gaps = 33/139 (23%)
Query: 61 DAPYAVIVFIHGESYEWNAGNHYDGSVLASSGHIIFVSINYRLGILGFLKTQTGHTQSGN 120
+ VI++ +G + + S AS G ++ +
Sbjct: 46 GVRHPVILWGNG-TGAGPSTYAGLLSHWASHGFVV-AAAETS----------------NA 87
Query: 121 WAVSDVIAALEWIKINIASFGG------DPTRITLFGHDTGAALVNIVLLTPSVKGLFHR 174
+++A L+++ + G + R+ GH G + V+
Sbjct: 88 GTGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAGQDTRVRTTA-- 145
Query: 175 VTLLSGSILSPWSFVHDPD 193
+ P++ D
Sbjct: 146 -------PIQPYTLGLGHD 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl
oligopeptidase family, serine PR proline-specific
peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas
gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Length = 706
Score = 33.9 bits (78), Expect = 0.083
Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 25/104 (24%)
Query: 63 PYAVIVFIHGE------SYEWNAGNHYDGSVLASSGHIIFVSINYRLGILG-------FL 109
Y VIV+++G + W + +A G+ + +++ R G F
Sbjct: 484 KYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAV-FTVDSR----GSANRGAAFE 538
Query: 110 KTQTGHTQSGNWAVSDVIAALEWIKINIASFGG-DPTRITLFGH 152
+ H + G ++D + +++ + S D RI + G
Sbjct: 539 Q--VIHRRLGQTEMADQMCGVDF----LKSQSWVDADRIGVHGW 576
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal
hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Length = 306
Score = 33.5 bits (76), Expect = 0.10
Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 16/102 (15%)
Query: 61 DAPYAVIVFIHGESYEWNAGNHYDGSVLASSGHIIFVSINYRLGILGFLKTQTGHTQSGN 120
+ Y I G + + G +AS G + ++I+ T Q +
Sbjct: 93 NNTYGAIAISPG-YTGTQSSIAWLGERIASHG-FVVIAIDTN----------TTLDQPDS 140
Query: 121 WAVSDVIAALEWIKINIASFGG---DPTRITLFGHDTGAALV 159
A + AAL+++ + +S D +R+ + GH G
Sbjct: 141 RA-RQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGT 181
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase;
alpha/beta hydrolase, META-cleavage pathway; 2.1A
{Arthrobacter nicotinovorans} SCOP: c.69.1.41
Length = 386
Score = 33.4 bits (76), Expect = 0.13
Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 16/102 (15%)
Query: 61 DAPYAVIVFIHG-ESY-EWNAGNHYDGSVLASSGHIIFVSINYR-LGILGFLKTQTGHTQ 117
P+ ++ + G ES E + +++ G + G + K G +
Sbjct: 149 PGPHPAVIMLGGLESTKEES---FQMENLVLDRGMATAT-FDGPGQGEMFEYKRIAGDYE 204
Query: 118 SGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALV 159
AV D++ LE I I + G G
Sbjct: 205 KYTSAVVDLLTKLEAI---------RNDAIGVLGRSLGGNYA 237
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga
maritima} PDB: 3doi_A
Length = 380
Score = 32.7 bits (74), Expect = 0.17
Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 16/108 (14%)
Query: 63 PYAVIVFIHG------ESYEWNAGNHYDGSVLASSGHI-----IFVSINYRLGI-LGFLK 110
Y ++VF+HG ++Y AGN V A + ++ L
Sbjct: 173 KYPLVVFLHGAGERGTDNYLQVAGNRG-AVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLF 231
Query: 111 TQTGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAAL 158
T + + + VI + + + + D RI + G G
Sbjct: 232 TDRENPFNPEKPLLAVIKIIRKL---LDEYNIDENRIYITGLSMGGYG 276
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha
sandwich, PSI, protein structure initiative; 1.50A
{Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A
3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Length = 318
Score = 32.4 bits (74), Expect = 0.21
Identities = 28/127 (22%), Positives = 39/127 (30%), Gaps = 25/127 (19%)
Query: 61 DAPYAVIVFIHGESYEWNA-GNHYDGSVLASSGHIIFVSINYRLGILGFLK-------TQ 112
+ P+ IV HG Y + G ++ A G+ F + R G
Sbjct: 79 EGPHPAIVKYHG--YNASYDGEIHEMVNWALHGYATFG-MLVR-GQQRSEDTSISPHGHA 134
Query: 113 TGHTQSGNW---------AVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVL 163
G G D + ALE I + D TRI + G G L
Sbjct: 135 LGWMTKGILDKDTYYYRGVYLDAVRALEVI---SSFDEVDETRIGVTGGSQGGGLTIAAA 191
Query: 164 -LTPSVK 169
L+ K
Sbjct: 192 ALSDIPK 198
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct
initiative, midwest center for structural genomics,
MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP:
c.69.1.14
Length = 226
Score = 31.7 bits (72), Expect = 0.32
Identities = 8/64 (12%), Positives = 17/64 (26%), Gaps = 2/64 (3%)
Query: 122 AVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFHRVTLLSGS 181
+ E++ + D I G+ GA + +L + L
Sbjct: 96 LIFRTKELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHY--ENALKGAVLHHPM 153
Query: 182 ILSP 185
+
Sbjct: 154 VPRR 157
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088,
agrobacterium tumefaciens STR. C58 structural genomics,
PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP:
c.69.1.14
Length = 251
Score = 30.3 bits (68), Expect = 1.0
Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 4/63 (6%)
Query: 125 DVIAALEWIK--INIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFHRVTLLSGSI 182
D+ A + I + G GA ++ VL+ LF L+ I
Sbjct: 119 DLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQ--PELFDAAVLMHPLI 176
Query: 183 LSP 185
Sbjct: 177 PFE 179
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint
center for structural genomics, JCSG; HET: MSE; 1.90A
{Bacteroides vulgatus atcc 8482}
Length = 391
Score = 29.9 bits (66), Expect = 1.5
Identities = 14/155 (9%), Positives = 34/155 (21%), Gaps = 44/155 (28%)
Query: 44 VGYSLEHGGRLEGS----RGVDAPYAVIVFIHG-----------------ESYEWNAGNH 82
+ + ++ I G + ++N
Sbjct: 90 WEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKV 149
Query: 83 YDGSVLASSGHIIFV-----------------SINYRLGILGFLKTQTGHTQSGNWAVSD 125
+ G++ NY ++ + G + G +
Sbjct: 150 SMALNMVKEGYVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLG-YTSYL 208
Query: 126 VIAALEWIKINIASFGG-DPTRITLFGHDTGAALV 159
+ L W+ + RI + G G +
Sbjct: 209 DMQVLNWM----KAQSYIRKDRIVISGFSLGTEPM 239
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB:
3cxu_A*
Length = 328
Score = 28.1 bits (63), Expect = 4.3
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 11/58 (18%)
Query: 123 VSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALV-NIVLLTPSVKGLFHRVTLLS 179
V DV+A LE + + ++ + HD GA + ++ L P + LS
Sbjct: 89 VGDVVALLE-------AIAPNEEKVFVVAHDWGALIAWHLCLFRPD---KVKALVNLS 136
>2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana}
Length = 419
Score = 28.5 bits (63), Expect = 4.4
Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 107 GFLKTQTGHTQSGNWAVSDVIAA-LEWIKINIASFGGDPTRITLFGHDTGAAL 158
G+ + + ++ L + + + + IT+ GH GAAL
Sbjct: 189 GWYSIYMSQDERSPFTKTNARDQVLREVGRLLEKYKDEEVSITICGHSLGAAL 241
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural
genomics, PSI, structure initiative; 2.00A {Pseudomonas
aeruginosa}
Length = 367
Score = 28.1 bits (62), Expect = 5.0
Identities = 18/148 (12%), Positives = 40/148 (27%), Gaps = 11/148 (7%)
Query: 61 DAPYAVIVFIHGESYEWNAGNHYDGSVLASSGHIIFVSINYRLGILGFLKTQTGHTQSGN 120
IV + +A G + ++ + ++ +
Sbjct: 93 GDRLPAIVIGGPFGAVKEQSSGLYAQTMAERG-FVTLAFDPS----YTGESGGQPRNVAS 147
Query: 121 WA--VSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLT-PSVKGLFHRVTL 177
D AA+++I + + RI + G + + VK +
Sbjct: 148 PDINTEDFSAAVDFISLLP---EVNRERIGVIGICGWGGMALNAVAVDKRVKAVVTSTMY 204
Query: 178 LSGSILSPWSFVHDPDSIRSNVADQLGC 205
++S R+ +QLG
Sbjct: 205 DMTRVMSKGYNDSVTLEQRTRTLEQLGQ 232
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein,
BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics,
PSI-2; 1.72A {Homo sapiens}
Length = 194
Score = 27.8 bits (61), Expect = 5.1
Identities = 20/172 (11%), Positives = 43/172 (25%), Gaps = 31/172 (18%)
Query: 67 IVFIHGESYEWNAGNHYDG---SVLASSGHIIFVSINYRLGILGFLKTQTGHTQSGNWAV 123
V + G + + G L ++ N +
Sbjct: 7 AVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNM-----------------PDPIT 49
Query: 124 SDVIAALEWIKINIASFGGDPTRITLFGHDTGAALVNIVLLTPSVKGLFHRVTLLSG--- 180
+ L +++ + + + GH +GA T V + S
Sbjct: 50 ARESIWLPFMETELHC----DEKTIIIGHSSGAIAAMRYAETHRVYAIVLVSAYTSDLGD 105
Query: 181 ---SILSPWSFVHDPDSIRSNVADQLGCT-LSDNLAPCLRTHTLASLLQVNL 228
++ + I++N + D P +A L+ L
Sbjct: 106 ENERASGYFTRPWQWEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRLETKL 157
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold;
1.90A {Plesiocystis pacifica}
Length = 297
Score = 28.2 bits (63), Expect = 5.2
Identities = 22/119 (18%), Positives = 38/119 (31%), Gaps = 43/119 (36%)
Query: 55 EGSRGVDAPYAVIVFIHGE---SYEWNAGNHYDGSVLASSGHII--FVSINYRLGI---- 105
EG R DA + +HGE S+ + ++ F + R+ +
Sbjct: 40 EGPR--DAE-HTFLCLHGEPSWSFLYR--------------KMLPVFTAAGGRV-VAPDL 81
Query: 106 LGF-----LKTQTGHTQSGNWAVSDVIAALEWIKINIASFGGDPTRITLFGHDTGAALV 159
GF +T + ++A L+ + R+TL D G L
Sbjct: 82 FGFGRSDKPTDDAVYTFG--FHRRSLLAFLDAL---------QLERVTLVCQDWGGILG 129
>1g8k_A Arsenite oxidase; molybdopterin, [3Fe-4S] cluster, [2Fe-2S] rieske,
oxidoreductase; HET: MGD; 1.64A {Alcaligenes faecalis}
SCOP: b.52.2.2 c.81.1.1 PDB: 1g8j_A*
Length = 825
Score = 27.7 bits (62), Expect = 7.4
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 10/53 (18%)
Query: 122 AVSDVIAALEWIKINIASFGGDPTRITLF---------GHDTGAALVNIVLLT 165
V + A EW A G P + + + +AL+++V+ T
Sbjct: 356 PVDMLKRAAEWSYKPKA-SGQAPRTMHAYEKGIIWGNDNYVIQSALLDLVIAT 407
>3tg7_A Hexon protein, late protein 2; adenovirus structural protein, with
NEW finding featuring PO binding to human coagulation
factor X; 1.57A {Human adenovirus 5} PDB: 2bvi_F 1p30_A
1vsz_A 3iyn_A 1p2z_A* 2obe_A
Length = 951
Score = 27.6 bits (61), Expect = 8.8
Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 25/87 (28%)
Query: 254 DNFVTTPLMAGVVTTESYLNFNANDIQYGFEEDQRNRVLRLTD---DQRVQYLLSKLSGS 310
DNF+ LM Y N N + Q N V+ L D + Q LL +
Sbjct: 330 DNFIG--LM--------YYNSTGNMGVLAGQASQLNAVVDLQDRNTELSYQLLLDSIGDR 379
Query: 311 ALTVCSGIPPIGSNYQTIWNLLVDRYE 337
+ Y ++WN VD Y+
Sbjct: 380 ------------TRYFSMWNQAVDSYD 394
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor,
leucine rich repeat, receptor ectodomain, signaling
protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B
1shy_B 1ssl_A
Length = 727
Score = 27.3 bits (59), Expect = 9.8
Identities = 19/132 (14%), Positives = 36/132 (27%)
Query: 86 SVLASSGHIIFVSINYRLGILGFLKTQTGHTQSGNWAVSDVIAALEWIKINIASFGGDPT 145
++L +S YR L+ + + I+ + IA+ G
Sbjct: 380 TLLRNSSGCEARRDEYRTEFTTALQRVDLFMGQFSEVLLTSISTFIKGDLTIANLGTSEG 439
Query: 146 RITLFGHDTGAALVNIVLLTPSVKGLFHRVTLLSGSILSPWSFVHDPDSIRSNVADQLGC 205
R V + V + + ++ V I + LGC
Sbjct: 440 RFMQVVVSRSGPSTPHVNFLLDSHPVSPEVIVEHTLNQNGYTLVITGKKITKIPLNGLGC 499
Query: 206 TLSDNLAPCLRT 217
+ + CL
Sbjct: 500 RHFQSCSQCLSA 511
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.136 0.420
Gapped
Lambda K H
0.267 0.0586 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 6,139,985
Number of extensions: 373113
Number of successful extensions: 887
Number of sequences better than 10.0: 1
Number of HSP's gapped: 812
Number of HSP's successfully gapped: 100
Length of query: 388
Length of database: 6,701,793
Length adjustment: 95
Effective length of query: 293
Effective length of database: 4,049,298
Effective search space: 1186444314
Effective search space used: 1186444314
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.4 bits)