BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6012
(168 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P62257|UBE2H_MOUSE Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2
SV=1
Length = 183
Score = 207 bits (526), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/149 (69%), Positives = 113/149 (75%), Gaps = 21/149 (14%)
Query: 1 MSSPSAGKRRMDTDVIKLIESKHEVTILGAVF-------------YYGGVWKVRVHLPEH 47
MSSPS GKRRMDTDV+KLIESKHEVTILG + Y GGVWKVRV LP+
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDK 60
Query: 48 YSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECFLPQL 107
Y KSPSIGF NK++HPNID SGTVCLDVINQ WTALYDL+NIFE FLPQL
Sbjct: 61 YPFKSPSIGFMNKIFHPNIDEA--------SGTVCLDVINQTWTALYDLTNIFESFLPQL 112
Query: 108 LTYPNPIDPLNGDAAAMYLHKPDEYKKKC 136
L YPNPIDPLNGDAAAMYLH+P+EYK+K
Sbjct: 113 LAYPNPIDPLNGDAAAMYLHRPEEYKQKI 141
>sp|P62256|UBE2H_HUMAN Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1
SV=1
Length = 183
Score = 207 bits (526), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/149 (69%), Positives = 113/149 (75%), Gaps = 21/149 (14%)
Query: 1 MSSPSAGKRRMDTDVIKLIESKHEVTILGAVF-------------YYGGVWKVRVHLPEH 47
MSSPS GKRRMDTDV+KLIESKHEVTILG + Y GGVWKVRV LP+
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDK 60
Query: 48 YSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECFLPQL 107
Y KSPSIGF NK++HPNID SGTVCLDVINQ WTALYDL+NIFE FLPQL
Sbjct: 61 YPFKSPSIGFMNKIFHPNIDEA--------SGTVCLDVINQTWTALYDLTNIFESFLPQL 112
Query: 108 LTYPNPIDPLNGDAAAMYLHKPDEYKKKC 136
L YPNPIDPLNGDAAAMYLH+P+EYK+K
Sbjct: 113 LAYPNPIDPLNGDAAAMYLHRPEEYKQKI 141
>sp|Q32LN1|UBE2H_BOVIN Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1
Length = 183
Score = 207 bits (526), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/149 (69%), Positives = 113/149 (75%), Gaps = 21/149 (14%)
Query: 1 MSSPSAGKRRMDTDVIKLIESKHEVTILGAVF-------------YYGGVWKVRVHLPEH 47
MSSPS GKRRMDTDV+KLIESKHEVTILG + Y GGVWKVRV LP+
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDK 60
Query: 48 YSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECFLPQL 107
Y KSPSIGF NK++HPNID SGTVCLDVINQ WTALYDL+NIFE FLPQL
Sbjct: 61 YPFKSPSIGFMNKIFHPNIDEA--------SGTVCLDVINQTWTALYDLTNIFESFLPQL 112
Query: 108 LTYPNPIDPLNGDAAAMYLHKPDEYKKKC 136
L YPNPIDPLNGDAAAMYLH+P+EYK+K
Sbjct: 113 LAYPNPIDPLNGDAAAMYLHRPEEYKQKI 141
>sp|Q9P7R4|UBC8_SCHPO Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc8 PE=3 SV=1
Length = 184
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 97/150 (64%), Gaps = 25/150 (16%)
Query: 1 MSSPSAGKRRMDTDVIKLIESKHEVTILGAVF--------------YYGGVWKVRVHLPE 46
MSSP +RR++TDV+KL+ S +EVT++ Y GG+WKV V LP
Sbjct: 1 MSSP---RRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPS 57
Query: 47 HYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECFLPQ 106
Y KSPSIGF N+++HPNID +SG+VCLDVINQ W+ ++D+ NIFE FLPQ
Sbjct: 58 EYPWKSPSIGFVNRIFHPNIDE--------LSGSVCLDVINQTWSPMFDMINIFEVFLPQ 109
Query: 107 LLTYPNPIDPLNGDAAAMYLHKPDEYKKKC 136
LL YPN DPLNG+AAA+ L +P+ Y K
Sbjct: 110 LLRYPNASDPLNGEAAALLLREPNTYYAKV 139
>sp|P16577|UBC4_WHEAT Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4
PE=1 SV=1
Length = 184
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 95/150 (63%), Gaps = 25/150 (16%)
Query: 1 MSSPSAGKRRMDTDVIKLIESKHEVTILGA--------------VFYYGGVWKVRVHLPE 46
MSSPS +R + D++KL+ S ++V ++ Y GGVWKVRV L E
Sbjct: 1 MSSPS---KRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTE 57
Query: 47 HYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECFLPQ 106
Y KSPSIGF NK+YHPN+D +SG+VCLDVINQ W+ ++DL NIFE FLPQ
Sbjct: 58 AYPYKSPSIGFTNKIYHPNVDE--------MSGSVCLDVINQTWSPMFDLVNIFEVFLPQ 109
Query: 107 LLTYPNPIDPLNGDAAAMYLHKPDEYKKKC 136
LL YPNP DPLNG+AA++ + + Y+ K
Sbjct: 110 LLLYPNPSDPLNGEAASLMMRDKNAYENKV 139
>sp|P42749|UBC5_ARATH Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5
PE=2 SV=2
Length = 185
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 95/150 (63%), Gaps = 25/150 (16%)
Query: 1 MSSPSAGKRRMDTDVIKLIESKHEVTILGA--------------VFYYGGVWKVRVHLPE 46
MSSPS +R + D++KL+ S ++V ++ Y GGVWK+RV LP+
Sbjct: 1 MSSPS---KRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPD 57
Query: 47 HYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECFLPQ 106
Y KSPS+GF K+YHPN+D +SG+VCLDVINQ W+ ++DL N+FE FLPQ
Sbjct: 58 AYPYKSPSVGFITKIYHPNVDE--------MSGSVCLDVINQTWSPMFDLVNVFETFLPQ 109
Query: 107 LLTYPNPIDPLNGDAAAMYLHKPDEYKKKC 136
LL YPNP DPLNG+AAA+ + Y+++
Sbjct: 110 LLLYPNPSDPLNGEAAALMMRDRPTYEQRV 139
>sp|P42748|UBC4_ARATH Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4
PE=2 SV=2
Length = 187
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 94/150 (62%), Gaps = 25/150 (16%)
Query: 1 MSSPSAGKRRMDTDVIKLIESKHEVTILGA--------------VFYYGGVWKVRVHLPE 46
MSSPS +R + D++KL+ S ++V + Y GGVWK+RV LP+
Sbjct: 1 MSSPS---KRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPD 57
Query: 47 HYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECFLPQ 106
Y KSPS+GF K+YHPN+D +SG+VCLDVINQ W+ ++DL N+FE FLPQ
Sbjct: 58 AYPYKSPSVGFITKIYHPNVDE--------LSGSVCLDVINQTWSPMFDLVNVFETFLPQ 109
Query: 107 LLTYPNPIDPLNGDAAAMYLHKPDEYKKKC 136
LL YPNP DPLNG+AAA+ + Y+++
Sbjct: 110 LLLYPNPSDPLNGEAAALMMRDRPAYEQRV 139
>sp|P42750|UBC6_ARATH Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6
PE=2 SV=2
Length = 183
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 91/150 (60%), Gaps = 25/150 (16%)
Query: 1 MSSPSAGKRRMDTDVIKLIESKHEVTILGA--------------VFYYGGVWKVRVHLPE 46
M+SPS +R + D++KL+ S ++V + Y GGVWK++V LPE
Sbjct: 1 MASPS---KRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPE 57
Query: 47 HYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECFLPQ 106
Y KSPS+GF NK+YHPN+D SG VCLDVINQ W+ ++DL N+FE FLPQ
Sbjct: 58 AYPYKSPSVGFVNKIYHPNVDES--------SGAVCLDVINQTWSPMFDLINVFESFLPQ 109
Query: 107 LLTYPNPIDPLNGDAAAMYLHKPDEYKKKC 136
LL YPNP DP NG+AA++ + Y+ K
Sbjct: 110 LLLYPNPSDPFNGEAASLLMRDRAAYELKV 139
>sp|P28263|UBC8_YEAST Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC8 PE=1 SV=2
Length = 218
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 86/146 (58%), Gaps = 22/146 (15%)
Query: 5 SAGKRRMDTDVIKLIESKHEVTILGAVF--------------YYGGVWKVRVHLPEHYSS 50
S+ KRR++TDV+KL+ S H+V ++ Y GVW++ V LP++Y
Sbjct: 2 SSSKRRIETDVMKLLMSDHQVDLINDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYPY 61
Query: 51 KSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECFLPQLLTY 110
KSPSIGF NK++HPNID SG++CLDVIN W+ LYDL NI E +P LL
Sbjct: 62 KSPSIGFVNKIFHPNID--------IASGSICLDVINSTWSPLYDLINIVEWMIPGLLKE 113
Query: 111 PNPIDPLNGDAAAMYLHKPDEYKKKC 136
PN DPLN +AA + L Y++K
Sbjct: 114 PNGSDPLNNEAATLQLRDKKLYEEKI 139
>sp|Q9Z255|UBE2A_MOUSE Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2
SV=1
Length = 152
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 29/152 (19%)
Query: 1 MSSPSAGKRRMDTDVIKLIE----------SKHEVTILGAVFY-------YGGVWKVRVH 43
MS+P+ +RR+ D +L E S++ + + AV + G +K+ +
Sbjct: 1 MSTPA--RRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIE 58
Query: 44 LPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECF 103
E Y +K P++ F +KM+HPN+ Y G++CLD++ W+ YD+S+I
Sbjct: 59 FTEEYPNKPPTVRFVSKMFHPNV---------YADGSICLDILQNRWSPTYDVSSILTS- 108
Query: 104 LPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKK 135
+ LL PNP P N AA +Y EY+K+
Sbjct: 109 IQSLLDEPNPNSPANSQAAQLYQENKREYEKR 140
>sp|P49459|UBE2A_HUMAN Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=1
SV=2
Length = 152
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 29/152 (19%)
Query: 1 MSSPSAGKRRMDTDVIKLIE----------SKHEVTILGAVFY-------YGGVWKVRVH 43
MS+P+ +RR+ D +L E S++ + + AV + G +K+ +
Sbjct: 1 MSTPA--RRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIE 58
Query: 44 LPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECF 103
E Y +K P++ F +KM+HPN+ Y G++CLD++ W+ YD+S+I
Sbjct: 59 FTEEYPNKPPTVRFVSKMFHPNV---------YADGSICLDILQNRWSPTYDVSSILTS- 108
Query: 104 LPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKK 135
+ LL PNP P N AA +Y EY+K+
Sbjct: 109 IQSLLDEPNPNSPANSQAAQLYQENKREYEKR 140
>sp|P63149|UBE2B_RAT Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b
PE=2 SV=1
Length = 152
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 1 MSSPSAGKRRMDTDVIKLIE----------SKHEVTILGAVFY-------YGGVWKVRVH 43
MS+P+ +RR+ D +L E S++ + AV + G +K+ +
Sbjct: 1 MSTPA--RRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIE 58
Query: 44 LPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECF 103
E Y +K P++ F +KM+HPN+ Y G++CLD++ W+ YD+S+I
Sbjct: 59 FSEEYPNKPPTVRFLSKMFHPNV---------YADGSICLDILQNRWSPTYDVSSILTS- 108
Query: 104 LPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKKC 136
+ LL PNP P N AA +Y EY+K+
Sbjct: 109 IQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
>sp|P63148|UBE2B_RABIT Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B
PE=2 SV=1
Length = 152
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 1 MSSPSAGKRRMDTDVIKLIE----------SKHEVTILGAVFY-------YGGVWKVRVH 43
MS+P+ +RR+ D +L E S++ + AV + G +K+ +
Sbjct: 1 MSTPA--RRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIE 58
Query: 44 LPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECF 103
E Y +K P++ F +KM+HPN+ Y G++CLD++ W+ YD+S+I
Sbjct: 59 FSEEYPNKPPTVRFLSKMFHPNV---------YADGSICLDILQNRWSPTYDVSSILTS- 108
Query: 104 LPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKKC 136
+ LL PNP P N AA +Y EY+K+
Sbjct: 109 IQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
>sp|P63147|UBE2B_MOUSE Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1
SV=1
Length = 152
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 1 MSSPSAGKRRMDTDVIKLIE----------SKHEVTILGAVFY-------YGGVWKVRVH 43
MS+P+ +RR+ D +L E S++ + AV + G +K+ +
Sbjct: 1 MSTPA--RRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIE 58
Query: 44 LPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECF 103
E Y +K P++ F +KM+HPN+ Y G++CLD++ W+ YD+S+I
Sbjct: 59 FSEEYPNKPPTVRFLSKMFHPNV---------YADGSICLDILQNRWSPTYDVSSILTS- 108
Query: 104 LPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKKC 136
+ LL PNP P N AA +Y EY+K+
Sbjct: 109 IQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
>sp|P63146|UBE2B_HUMAN Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1
SV=1
Length = 152
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 1 MSSPSAGKRRMDTDVIKLIE----------SKHEVTILGAVFY-------YGGVWKVRVH 43
MS+P+ +RR+ D +L E S++ + AV + G +K+ +
Sbjct: 1 MSTPA--RRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIE 58
Query: 44 LPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECF 103
E Y +K P++ F +KM+HPN+ Y G++CLD++ W+ YD+S+I
Sbjct: 59 FSEEYPNKPPTVRFLSKMFHPNV---------YADGSICLDILQNRWSPTYDVSSILTS- 108
Query: 104 LPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKKC 136
+ LL PNP P N AA +Y EY+K+
Sbjct: 109 IQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
>sp|Q32P99|UBE2B_BOVIN Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1
Length = 152
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 29/153 (18%)
Query: 1 MSSPSAGKRRMDTDVIKLIE----------SKHEVTILGAVFY-------YGGVWKVRVH 43
MS+P+ +RR+ D +L E S++ + AV + G +K+ +
Sbjct: 1 MSTPA--RRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIE 58
Query: 44 LPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECF 103
E Y +K P++ F +KM+HPN+ Y G++CLD++ W+ YD+S+I
Sbjct: 59 FSEEYPNKPPTVRFLSKMFHPNV---------YADGSICLDILQNRWSPTYDVSSILTS- 108
Query: 104 LPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKKC 136
+ LL PNP P N AA +Y EY+K+
Sbjct: 109 IQSLLDEPNPNSPANSQAAQLYQENKREYEKRV 141
>sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1
SV=1
Length = 152
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 29/152 (19%)
Query: 1 MSSPSAGKRRMDTDVIKLIES----------KHEVTILGAVFY-------YGGVWKVRVH 43
MS+P+ ++R+ D +L + + +T+ AV + GG +K+ +
Sbjct: 1 MSTPA--RKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQ 58
Query: 44 LPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECF 103
E Y +K P++ F ++M+HPNI Y G++CLD++ W+ +YD++ I
Sbjct: 59 FTEDYPNKPPTVRFVSRMFHPNI---------YADGSICLDILQNQWSPIYDVAAILTS- 108
Query: 104 LPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKK 135
+ LL PNP P N +AA MY EY +K
Sbjct: 109 IQSLLCDPNPNSPANSEAARMYSENKREYNRK 140
>sp|P25865|UBC1_ARATH Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1
PE=1 SV=1
Length = 152
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 10/103 (9%)
Query: 33 YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTA 92
+ GG +K+ + E Y +K P++ F ++M+HPNI Y G++CLD++ W+
Sbjct: 48 WDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNI---------YADGSICLDILQNQWSP 98
Query: 93 LYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKK 135
+YD++ I + LL PNP P N +AA MY EY ++
Sbjct: 99 IYDVAAILTS-IQSLLCDPNPNSPANSEAARMYSESKREYNRR 140
>sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2
PE=2 SV=1
Length = 152
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 10/103 (9%)
Query: 33 YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTA 92
+ GG +K+ + E Y +K P++ F ++M+HPNI Y G++CLD++ W+
Sbjct: 48 WDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNI---------YADGSICLDILQNQWSP 98
Query: 93 LYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKK 135
+YD++ I + LL PNP P N +AA M+ EY ++
Sbjct: 99 IYDVAAILTS-IQSLLCDPNPNSPANSEAARMFSESKREYNRR 140
>sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2
SV=1
Length = 152
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 10/103 (9%)
Query: 33 YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTA 92
+ GG +K+ + E Y +K P++ F ++M+HPNI Y G++CLD++ W+
Sbjct: 48 WDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNI---------YADGSICLDILQNQWSP 98
Query: 93 LYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKK 135
+YD++ I + LL PNP P N +AA M+ EY ++
Sbjct: 99 IYDVAAILTS-IQSLLCDPNPNSPANSEAARMFSENKREYNRR 140
>sp|P42746|UBC3_ARATH Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3
PE=2 SV=1
Length = 150
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 10/103 (9%)
Query: 35 GGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALY 94
GG +K+ +H E Y +K P + F ++M+HPNI Y G++CLD++ W+ +Y
Sbjct: 50 GGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNI---------YADGSICLDILQNQWSPIY 100
Query: 95 DLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKKCL 137
D++ + + LL PNP P N +AA ++ EY +K +
Sbjct: 101 DVAAVLTS-IQSLLCDPNPDSPANAEAARLFSENKREYNRKVI 142
>sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=UbcD6 PE=2 SV=2
Length = 151
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 29/152 (19%)
Query: 1 MSSPSAGKRRMDTDVIKLIE----------SKHEVTILGAVFY-------YGGVWKVRVH 43
MS+P+ +RR+ D +L E + + + I AV + G +K+ +
Sbjct: 1 MSTPA--RRRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIE 58
Query: 44 LPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECF 103
E Y +K P++ F +K++HPN+ Y G +CLD++ W+ YD+S I
Sbjct: 59 FTEEYPNKPPTVRFVSKVFHPNV---------YADGGICLDILQNRWSPTYDVSAILTS- 108
Query: 104 LPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKK 135
+ LL+ PNP P N AA +Y EY+K+
Sbjct: 109 IQSLLSDPNPNSPANSTAAQLYKENRREYEKR 140
>sp|P52478|UBC1_CAEEL Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans
GN=ubc-1 PE=1 SV=1
Length = 192
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 29/153 (18%)
Query: 1 MSSPSAGKRRMDTDVIKLIES---------------KHEVTILG--AVFYYGGVWKVRVH 43
M++PS +RR+ D KL E E I G + G +K+ +
Sbjct: 1 MTTPS--RRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLE 58
Query: 44 LPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECF 103
E Y +K P++ F +KM+HPN+ Y G++CLD++ W+ YD++ I
Sbjct: 59 FTEEYPNKPPTVKFISKMFHPNV---------YADGSICLDILQNRWSPTYDVAAILTS- 108
Query: 104 LPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKKC 136
+ LL PNP P N AA +Y EY+K+
Sbjct: 109 IQSLLDEPNPNSPANSLAAQLYQENRREYEKRV 141
>sp|P35134|UBC11_ARATH Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11
PE=2 SV=2
Length = 148
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 12/104 (11%)
Query: 24 EVTILG--AVFYYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTV 81
+ TI+G Y GGV+ V +H P Y K P + FK K+YHPNI+ +G++
Sbjct: 34 QATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINS---------NGSI 84
Query: 82 CLDVINQAWTALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMY 125
CLD++ + W+ +S + LLT PNP DPL + A MY
Sbjct: 85 CLDILKEQWSPALTISKVLLSIC-SLLTDPNPDDPLVPEIAHMY 127
>sp|Q553F3|UBC2_DICDI Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum
GN=ubc2 PE=3 SV=2
Length = 151
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Query: 32 FYYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWT 91
+ G +K+ + E Y + +P++ F +KM+HPN+ Y G++CLD++ W+
Sbjct: 47 IWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNV---------YADGSICLDILQNQWS 97
Query: 92 ALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKK 135
+YD++ I + LL PNP P N ++A ++ EY +K
Sbjct: 98 PIYDIAAILTS-IQSLLCDPNPNSPANSESARLFRENKREYNRK 140
>sp|P35133|UBC10_ARATH Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10
PE=1 SV=1
Length = 148
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 24 EVTILGAVF--YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTV 81
+ TI+G Y GGV+ V +H P Y K P + F+ K++HPNI+ +G++
Sbjct: 34 QATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS---------NGSI 84
Query: 82 CLDVINQAWTALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYK 133
CLD++ + W+ +S + LLT PNP DPL + A MY ++Y+
Sbjct: 85 CLDILKEQWSPALTISKVLLSIC-SLLTDPNPDDPLVPEIAHMYKTDKNKYE 135
>sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1
SV=1
Length = 148
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 24 EVTILGAVF--YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTV 81
+ TI+G Y GGV+ V +H P Y K P + F+ K++HPNI+ +G++
Sbjct: 34 QATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS---------NGSI 84
Query: 82 CLDVINQAWTALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYK 133
CLD++ + W+ +S + LLT PNP DPL + A MY ++Y+
Sbjct: 85 CLDILKEQWSPALTISKVLLSIC-SLLTDPNPDDPLVPEIAHMYKTDKNKYE 135
>sp|P35135|UBC4_SOLLC Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2
SV=1
Length = 148
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 12/104 (11%)
Query: 24 EVTILGAVF--YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTV 81
+ TI+G Y GGV+ V +H P Y K P + F+ K++HPNI+ +G++
Sbjct: 34 QATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS---------NGSI 84
Query: 82 CLDVINQAWTALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMY 125
CLD++ + W+ +S + LLT PNP DPL + A MY
Sbjct: 85 CLDILKEQWSPALTISKVLLSIC-SLLTDPNPDDPLVPEIAHMY 127
>sp|P35131|UBC8_ARATH Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8
PE=1 SV=1
Length = 148
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 12/104 (11%)
Query: 24 EVTILGAVF--YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTV 81
+ TI+G Y GGV+ V +H P Y K P + F+ K++HPNI+ +G++
Sbjct: 34 QATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS---------NGSI 84
Query: 82 CLDVINQAWTALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMY 125
CLD++ + W+ +S + LLT PNP DPL + A MY
Sbjct: 85 CLDILKEQWSPALTISKVLLSIC-SLLTDPNPDDPLVPEIAHMY 127
>sp|O00103|UBC11_SCHPO Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc11 PE=3 SV=1
Length = 176
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Query: 31 VFYYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAW 90
+Y G +K+ + P +Y P+I F + M+HPN+D +SG +CLD++ W
Sbjct: 71 TYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVD---------MSGNICLDILKDKW 121
Query: 91 TALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKK 134
+A+Y++ I L LL PN PLN AA ++ P EYK+
Sbjct: 122 SAVYNVQTIL-LSLQSLLGEPNNASPLNAQAAELWSKDPIEYKR 164
>sp|Q8S920|UBC5A_ORYSJ Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp. japonica
GN=UBC5A PE=2 SV=1
Length = 147
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 14/112 (12%)
Query: 24 EVTILGAVF--YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTV 81
+ TI+G Y GGV+ V +H P Y K P + F+ K++HPNI+ +G++
Sbjct: 34 QATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS---------NGSI 84
Query: 82 CLDVINQAWTALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYK 133
CLD++ W+ +S + LLT PNP DPL + A MY K D +K
Sbjct: 85 CLDILKDQWSPALTISKVLLSIC-SLLTDPNPDDPLVPEIAHMY--KTDRHK 133
>sp|Q4PFA5|UBC2_USTMA Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=UBC2 PE=3 SV=1
Length = 185
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 33 YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTA 92
+ G +K+ + E Y +K P++ F +KM+HPN+ Y +G +CLD++ W+
Sbjct: 48 FEDGTFKLVLTFDESYPNKPPTVKFLSKMFHPNV---------YANGELCLDILQNRWSP 98
Query: 93 LYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKKCLPTMLA 142
YD++ I + LL PNP P N +AA++Y EY ++ T+ A
Sbjct: 99 TYDVAAILTS-IQSLLHDPNPNSPANAEAASLYRENMKEYVRRVKATVEA 147
>sp|Q94F47|UBC28_ARATH Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana GN=UBC28
PE=2 SV=1
Length = 148
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 12/104 (11%)
Query: 24 EVTILGAVF--YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTV 81
+ TI+G Y GGV+ V +H P Y K P + F+ K++HPN++ +G++
Sbjct: 34 QATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS---------NGSI 84
Query: 82 CLDVINQAWTALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMY 125
CLD++ + W+ +S + LLT PNP DPL + A MY
Sbjct: 85 CLDILKEQWSPALTISKVLLSIC-SLLTDPNPDDPLVPEIAHMY 127
>sp|D3ZDK2|UB2D1_RAT Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1
PE=1 SV=1
Length = 147
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 24 EVTILGA--VFYYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTV 81
+ TI+G Y GGV+ + VH P Y K P I F K+YHPNI+ +G++
Sbjct: 34 QATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS---------NGSI 84
Query: 82 CLDVINQAWTALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKK 134
CLD++ W+ +S + LL PNP DPL D A +Y ++Y +
Sbjct: 85 CLDILRSQWSPALTVSKVLLSIC-SLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
>sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2
SV=1
Length = 147
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 24 EVTILGA--VFYYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTV 81
+ TI+G Y GGV+ + VH P Y K P I F K+YHPNI+ +G++
Sbjct: 34 QATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS---------NGSI 84
Query: 82 CLDVINQAWTALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKK 134
CLD++ W+ +S + LL PNP DPL D A +Y ++Y +
Sbjct: 85 CLDILRSQWSPALTVSKVLLSIC-SLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
>sp|P51668|UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1
SV=1
Length = 147
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 24 EVTILGA--VFYYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTV 81
+ TI+G Y GGV+ + VH P Y K P I F K+YHPNI+ +G++
Sbjct: 34 QATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS---------NGSI 84
Query: 82 CLDVINQAWTALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKK 134
CLD++ W+ +S + LL PNP DPL D A +Y ++Y +
Sbjct: 85 CLDILRSQWSPALTVSKVLLSIC-SLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
>sp|Q2TA10|UB2D1_BOVIN Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2
SV=1
Length = 147
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 24 EVTILGA--VFYYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTV 81
+ TI+G Y GGV+ + VH P Y K P I F K+YHPNI+ +G++
Sbjct: 34 QATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINS---------NGSI 84
Query: 82 CLDVINQAWTALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKK 134
CLD++ W+ +S + LL PNP DPL D A +Y ++Y +
Sbjct: 85 CLDILRSQWSPALTVSKVLLSIC-SLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
>sp|Q9FKT3|UBC30_ARATH Ubiquitin-conjugating enzyme E2 30 OS=Arabidopsis thaliana GN=UBC30
PE=2 SV=1
Length = 148
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 12/104 (11%)
Query: 24 EVTILGAVF--YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTV 81
+ TI+G + GGV+ V +H P Y K P + F+ K+YHPNI+ +G++
Sbjct: 34 QATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINS---------NGSI 84
Query: 82 CLDVINQAWTALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMY 125
CLD++ + W+ +S + LLT PNP DPL + A +Y
Sbjct: 85 CLDILKEQWSPALTVSKVLLSIC-SLLTDPNPDDPLVPEIAHIY 127
>sp|P52492|UBC11_YEAST Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC11 PE=1 SV=1
Length = 156
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Query: 33 YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTA 92
Y G +KV + P++Y P I F + M+HPN+D SG +CLD++ + W+A
Sbjct: 53 YSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDK---------SGNICLDILKEKWSA 103
Query: 93 LYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKKCL 137
+Y++ I L LL PN PLN AA ++ +EY+KK L
Sbjct: 104 VYNVETIL-LSLQSLLGEPNNRSPLNAVAAELWDADMEEYRKKVL 147
>sp|P0CS16|UBC2_CRYNJ Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=UBC2 PE=3 SV=1
Length = 169
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 27/153 (17%)
Query: 5 SAGKRRMDTDVIKLIESK----------HEVTILGAVFY-------YGGVWKVRVHLPEH 47
+A KRR+ D +L + + AV + G +++ + +
Sbjct: 3 TAAKRRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDA 62
Query: 48 YSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECFLPQL 107
Y +K P++ F +KM+HPNI Y +G +CLD++ W+ YD++ I + L
Sbjct: 63 YPNKPPTVRFISKMFHPNI---------YANGELCLDILQNRWSPTYDVAAILTS-VQSL 112
Query: 108 LTYPNPIDPLNGDAAAMYLHKPDEYKKKCLPTM 140
L PNP P N DAA ++ EY+++ T+
Sbjct: 113 LNDPNPASPANVDAAQLFKENLKEYERRVKKTV 145
>sp|P0CS17|UBC2_CRYNB Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=UBC2 PE=3 SV=1
Length = 169
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 27/153 (17%)
Query: 5 SAGKRRMDTDVIKLIESK----------HEVTILGAVFY-------YGGVWKVRVHLPEH 47
+A KRR+ D +L + + AV + G +++ + +
Sbjct: 3 TAAKRRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDA 62
Query: 48 YSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTALYDLSNIFECFLPQL 107
Y +K P++ F +KM+HPNI Y +G +CLD++ W+ YD++ I + L
Sbjct: 63 YPNKPPTVRFISKMFHPNI---------YANGELCLDILQNRWSPTYDVAAILTS-VQSL 112
Query: 108 LTYPNPIDPLNGDAAAMYLHKPDEYKKKCLPTM 140
L PNP P N DAA ++ EY+++ T+
Sbjct: 113 LNDPNPASPANVDAAQLFKENLKEYERRVKKTV 145
>sp|Q8S919|UBC5B_ORYSJ Ubiquitin-conjugating enzyme E2 5B OS=Oryza sativa subsp. japonica
GN=UBC5B PE=2 SV=1
Length = 148
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 33 YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTA 92
Y GGV+ V +H P Y K P + K K++HPNI+ +G++CLD++ + W+
Sbjct: 45 YAGGVFLVTIHFPPDYPFKPPKVALKTKVFHPNINS---------NGSICLDILKEQWSP 95
Query: 93 LYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMY 125
+S + LLT PNP DPL + A MY
Sbjct: 96 ALTISKVLLSIC-SLLTDPNPDDPLVPEIAHMY 127
>sp|P35128|UBE2N_DROME Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben
PE=2 SV=1
Length = 151
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 33 YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTA 92
+ GGV+K+ + LPE Y +P + F K+YHPNID G +CLDV+ W+
Sbjct: 47 FEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDR---------LGRICLDVLKDKWSP 97
Query: 93 LYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMY 125
+ I + LL+ PNP DPL D A ++
Sbjct: 98 ALQIRTIL-LSIQALLSAPNPDDPLANDVAELW 129
>sp|P06104|UBC2_YEAST Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RAD6 PE=1 SV=1
Length = 172
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 33 YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTA 92
Y G +++ + E Y +K P + F ++M+HPN+ Y +G +CLD++ WT
Sbjct: 48 YEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNV---------YANGEICLDILQNRWTP 98
Query: 93 LYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKKCLPTM 140
YD+++I + L PNP P N +AA ++ +Y K+ T+
Sbjct: 99 TYDVASILTS-IQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETV 145
>sp|Q6CUD9|UBC2_KLULA Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=UBC2 PE=3 SV=1
Length = 164
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 33 YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTA 92
Y G +++ + E Y +K P + F ++M+HPN+ Y +G +CLD++ WT
Sbjct: 48 YEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNV---------YANGEICLDILQNRWTP 98
Query: 93 LYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKKCLPTM 140
YD+++I + L PNP P N +AA ++ +Y K+ T+
Sbjct: 99 TYDVASILTS-IQSLFNDPNPASPANVEAATLFQDHKSQYVKRVKETV 145
>sp|O74549|UBC12_SCHPO NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ubc12 PE=3 SV=1
Length = 177
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 32 FYYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWT 91
+Y GG +K R+ + ++Y P + NK+YHPNID I G VCL+++ Q W
Sbjct: 64 YYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNID---------IEGNVCLNILRQDWN 114
Query: 92 ALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKKCLPTM 140
+ +L++I L L PN DPLN +AAA P + + M
Sbjct: 115 PVLNLNSIL-VGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVRTAM 162
>sp|Q75EB8|UBC2_ASHGO Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=UBC2
PE=3 SV=1
Length = 170
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 33 YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTA 92
Y G +++ + E Y +K P + F ++M+HPN+ Y +G +CLD++ WT
Sbjct: 48 YEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNV---------YANGEICLDILQNRWTP 98
Query: 93 LYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKKCLPTM 140
YD+++I + L PNP P N +AA ++ +Y K+ T+
Sbjct: 99 TYDVASILTS-IQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETV 145
>sp|Q4R4I1|UBE2N_MACFA Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N
PE=2 SV=1
Length = 152
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 33 YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTA 92
+ GG +K+ + LPE Y +P + F K+YHPN+D SG +CLD++ W+
Sbjct: 47 FEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDK---------SGRICLDILKDKWSP 97
Query: 93 LYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMY 125
+ + + LL+ PNP DPL D A +
Sbjct: 98 ALQIRTVL-LSIQALLSAPNPDDPLANDVAEQW 129
>sp|Q6FR76|UBC2_CANGA Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=UBC2 PE=3 SV=1
Length = 167
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 33 YYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTVCLDVINQAWTA 92
Y G +++ + E Y +K P + F ++M+HPN+ Y +G +CLD++ WT
Sbjct: 48 YEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNV---------YANGEICLDILQNRWTP 98
Query: 93 LYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKKKCLPTM 140
YD+++I + L PNP P N +AA ++ +Y K+ T+
Sbjct: 99 TYDVASILTS-IQSLFNDPNPASPANVEAATLFKDHKSQYIKRVKETV 145
>sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3
PE=2 SV=1
Length = 147
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 24 EVTILGA--VFYYGGVWKVRVHLPEHYSSKSPSIGFKNKMYHPNIDGGTLNRIFYISGTV 81
+ TI+G Y GGV+ + +H P Y K P + F ++YHPNI+ +G++
Sbjct: 34 QATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS---------NGSI 84
Query: 82 CLDVINQAWTALYDLSNIFECFLPQLLTYPNPIDPLNGDAAAMYLHKPDEYKK 134
CLD++ W+ +S + LL PNP DPL + A +Y D+Y +
Sbjct: 85 CLDILRSQWSPALTISKVLLSIC-SLLCDPNPDDPLVPEIARIYKTDRDKYNR 136
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,353,328
Number of Sequences: 539616
Number of extensions: 3043850
Number of successful extensions: 5450
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 4879
Number of HSP's gapped (non-prelim): 268
length of query: 168
length of database: 191,569,459
effective HSP length: 109
effective length of query: 59
effective length of database: 132,751,315
effective search space: 7832327585
effective search space used: 7832327585
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)