BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6026
(98 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195012846|ref|XP_001983759.1| GH15400 [Drosophila grimshawi]
gi|193897241|gb|EDV96107.1| GH15400 [Drosophila grimshawi]
Length = 104
Score = 187 bits (475), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/96 (93%), Positives = 93/96 (96%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
R LFYSFFKSLVGK+VVVELKND+SICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN
Sbjct: 9 RTLFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 68
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
CFIRGSVVRYVQLPGDEVDTQLLQDA RKEAV +TR
Sbjct: 69 CFIRGSVVRYVQLPGDEVDTQLLQDAARKEAVVSTR 104
>gi|350410763|ref|XP_003489131.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Bombus
impatiens]
Length = 140
Score = 186 bits (473), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/96 (90%), Positives = 91/96 (94%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
++LFYSFFKSL+GKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN
Sbjct: 45 KMLFYSFFKSLIGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 104
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
CFIRGSVVRYVQLPGDEVDTQLLQDA RKEA R
Sbjct: 105 CFIRGSVVRYVQLPGDEVDTQLLQDAARKEAAVQAR 140
>gi|195440762|ref|XP_002068209.1| GK10160 [Drosophila willistoni]
gi|194164294|gb|EDW79195.1| GK10160 [Drosophila willistoni]
Length = 106
Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/94 (94%), Positives = 92/94 (97%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGK+VVVELKND+SICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF
Sbjct: 13 LFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 72
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
IRGSVVRYVQLPGDEVDTQLLQDA RKEAV +TR
Sbjct: 73 IRGSVVRYVQLPGDEVDTQLLQDAARKEAVVSTR 106
>gi|21358381|ref|NP_648570.1| CG10418 [Drosophila melanogaster]
gi|195327103|ref|XP_002030261.1| GM25341 [Drosophila sechellia]
gi|195376259|ref|XP_002046914.1| GJ13149 [Drosophila virilis]
gi|195493810|ref|XP_002094573.1| GE21899 [Drosophila yakuba]
gi|195589798|ref|XP_002084636.1| GD14374 [Drosophila simulans]
gi|7294589|gb|AAF49929.1| CG10418 [Drosophila melanogaster]
gi|194119204|gb|EDW41247.1| GM25341 [Drosophila sechellia]
gi|194154072|gb|EDW69256.1| GJ13149 [Drosophila virilis]
gi|194180674|gb|EDW94285.1| GE21899 [Drosophila yakuba]
gi|194196645|gb|EDX10221.1| GD14374 [Drosophila simulans]
gi|220951570|gb|ACL88328.1| CG10418-PA [synthetic construct]
Length = 95
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/95 (93%), Positives = 93/95 (97%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGK+VVVELKND+SICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLPGDEVDTQLLQDA RKEAV +TR
Sbjct: 61 FIRGSVVRYVQLPGDEVDTQLLQDAARKEAVVSTR 95
>gi|157118346|ref|XP_001653182.1| small nuclear ribonucleoprotein Sm D1, putative [Aedes aegypti]
gi|158292631|ref|XP_314020.2| AGAP005136-PA [Anopheles gambiae str. PEST]
gi|108883305|gb|EAT47530.1| AAEL001363-PA [Aedes aegypti]
gi|157017082|gb|EAA09471.3| AGAP005136-PA [Anopheles gambiae str. PEST]
Length = 95
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/95 (92%), Positives = 92/95 (96%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLPGDEVDTQLLQDA RKEAV + R
Sbjct: 61 FIRGSVVRYVQLPGDEVDTQLLQDAARKEAVTSVR 95
>gi|194869802|ref|XP_001972524.1| GG15573 [Drosophila erecta]
gi|190654307|gb|EDV51550.1| GG15573 [Drosophila erecta]
Length = 112
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/94 (94%), Positives = 92/94 (97%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGK+VVVELKND+SICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF
Sbjct: 19 LFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 78
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
IRGSVVRYVQLPGDEVDTQLLQDA RKEAV +TR
Sbjct: 79 IRGSVVRYVQLPGDEVDTQLLQDAARKEAVVSTR 112
>gi|345488169|ref|XP_001605095.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Nasonia
vitripennis]
Length = 95
Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/95 (92%), Positives = 91/95 (95%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLPGDEVDTQLLQDA RKEA +R
Sbjct: 61 FIRGSVVRYVQLPGDEVDTQLLQDAARKEAATQSR 95
>gi|195102462|ref|XP_001998083.1| GH23600 [Drosophila grimshawi]
gi|193905529|gb|EDW04396.1| GH23600 [Drosophila grimshawi]
Length = 94
Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/94 (94%), Positives = 92/94 (97%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGK+VVVELKND+SICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF
Sbjct: 1 LFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 60
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
IRGSVVRYVQLPGDEVDTQLLQDA RKEAV +TR
Sbjct: 61 IRGSVVRYVQLPGDEVDTQLLQDAARKEAVVSTR 94
>gi|195126148|ref|XP_002007536.1| GI13004 [Drosophila mojavensis]
gi|193919145|gb|EDW18012.1| GI13004 [Drosophila mojavensis]
Length = 95
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/95 (92%), Positives = 93/95 (97%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGK+VVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLPGDEVDTQLLQDA RKEAV +TR
Sbjct: 61 FIRGSVVRYVQLPGDEVDTQLLQDAARKEAVVSTR 95
>gi|125978707|ref|XP_001353386.1| GA10305 [Drosophila pseudoobscura pseudoobscura]
gi|195160603|ref|XP_002021164.1| GL25187 [Drosophila persimilis]
gi|54642144|gb|EAL30893.1| GA10305 [Drosophila pseudoobscura pseudoobscura]
gi|194118277|gb|EDW40320.1| GL25187 [Drosophila persimilis]
Length = 95
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/95 (92%), Positives = 93/95 (97%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGK+VVVELKND+SICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLPG+EVDTQLLQDA RKEAV +TR
Sbjct: 61 FIRGSVVRYVQLPGEEVDTQLLQDAARKEAVVSTR 95
>gi|194747125|ref|XP_001956003.1| GF24817 [Drosophila ananassae]
gi|190623285|gb|EDV38809.1| GF24817 [Drosophila ananassae]
Length = 98
Score = 184 bits (467), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/94 (93%), Positives = 92/94 (97%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGK+VVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCF
Sbjct: 5 LFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCF 64
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
IRGSVVRYVQLPGDEVDTQLLQDA RKEAV +TR
Sbjct: 65 IRGSVVRYVQLPGDEVDTQLLQDAARKEAVVSTR 98
>gi|383863071|ref|XP_003707006.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Megachile
rotundata]
Length = 112
Score = 183 bits (465), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 87/96 (90%), Positives = 91/96 (94%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
++LFYSFFKSL+GKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN
Sbjct: 17 KMLFYSFFKSLIGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 76
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
CFIRGSVVRYVQLPGDEVDTQLLQDA RKEA R
Sbjct: 77 CFIRGSVVRYVQLPGDEVDTQLLQDAARKEAAVQAR 112
>gi|110760170|ref|XP_001120188.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm2-like [Apis
mellifera]
gi|340719471|ref|XP_003398177.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm2-like [Bombus
terrestris]
gi|380029303|ref|XP_003698316.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Apis
florea]
Length = 95
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/95 (91%), Positives = 90/95 (94%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSL+GKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLIGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLPGDEVDTQLLQDA RKEA R
Sbjct: 61 FIRGSVVRYVQLPGDEVDTQLLQDAARKEAAVQAR 95
>gi|242007296|ref|XP_002424477.1| Surfeit locus protein, putative [Pediculus humanus corporis]
gi|212507895|gb|EEB11739.1| Surfeit locus protein, putative [Pediculus humanus corporis]
Length = 401
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/95 (89%), Positives = 91/95 (95%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLT+ISVTDPDKYPHMLS+KNC
Sbjct: 307 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTEISVTDPDKYPHMLSIKNC 366
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLP DEVDTQLLQDA RKEA + +R
Sbjct: 367 FIRGSVVRYVQLPADEVDTQLLQDAARKEAASQSR 401
>gi|431921560|gb|ELK18914.1| U6 snRNA-associated Sm-like protein LSm2 [Pteropus alecto]
Length = 127
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/98 (88%), Positives = 91/98 (92%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
E LLFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSV
Sbjct: 30 FESLLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSV 89
Query: 61 KNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
KNCFIRGSVVRYVQLP DEVDTQLLQDA RKEA+ +
Sbjct: 90 KNCFIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ 127
>gi|301792294|ref|XP_002931116.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm2-like
[Ailuropoda melanoleuca]
Length = 98
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/95 (91%), Positives = 91/95 (95%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
M +LLFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSV
Sbjct: 1 MIKLLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSV 60
Query: 61 KNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
KNCFIRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 61 KNCFIRGSVVRYVQLPADEVDTQLLQDAARKEALQ 95
>gi|345321417|ref|XP_001520666.2| PREDICTED: hypothetical protein LOC100091911 [Ornithorhynchus
anatinus]
Length = 233
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCF
Sbjct: 140 LFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCF 199
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
IRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 200 IRGSVVRYVQLPADEVDTQLLQDAARKEALQ 230
>gi|348513603|ref|XP_003444331.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
[Oreochromis niloticus]
Length = 121
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/92 (93%), Positives = 89/92 (96%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
LLFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNC
Sbjct: 27 LLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC 86
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 87 FIRGSVVRYVQLPADEVDTQLLQDAARKEAMQ 118
>gi|62858431|ref|NP_001016402.1| LSM2 homolog, U6 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
gi|163838653|ref|NP_001106211.1| LSM2 homolog, U6 small nuclear RNA associated [Xenopus laevis]
gi|60618387|gb|AAH90606.1| LSM2 homolog, U6 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
gi|62871721|gb|AAH94397.1| Lsm2 protein [Xenopus laevis]
gi|89273744|emb|CAJ81423.1| LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Xenopus (Silurana) tropicalis]
gi|226372864|gb|ACO52057.1| U6 snRNA-associated Sm-like protein LSm2 [Rana catesbeiana]
Length = 95
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 86/92 (93%), Positives = 89/92 (96%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYVQLP DEVDTQLLQDA RKEAV
Sbjct: 61 FIRGSVVRYVQLPADEVDTQLLQDAARKEAVQ 92
>gi|357628758|gb|EHJ77961.1| hypothetical protein KGM_13005 [Danaus plexippus]
Length = 95
Score = 180 bits (457), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 86/95 (90%), Positives = 90/95 (94%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKL+DISV DPDKYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLSDISVIDPDKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLP DEVDTQLLQDA RKEA +TR
Sbjct: 61 FIRGSVVRYVQLPADEVDTQLLQDAARKEATVSTR 95
>gi|417407887|gb|JAA50536.1| Putative snrnp core protein, partial [Desmodus rotundus]
Length = 127
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/92 (92%), Positives = 89/92 (96%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNC
Sbjct: 33 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC 92
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 93 FIRGSVVRYVQLPADEVDTQLLQDAARKEALQ 124
>gi|318103625|ref|NP_001188170.1| u6 snRNA-associated sm-like protein lsm2 [Ictalurus punctatus]
gi|432855577|ref|XP_004068255.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Oryzias
latipes]
gi|308323693|gb|ADO28982.1| u6 snRNA-associated sm-like protein lsm2 [Ictalurus punctatus]
Length = 95
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/92 (92%), Positives = 89/92 (96%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 61 FIRGSVVRYVQLPADEVDTQLLQDAARKEAMQ 92
>gi|354492832|ref|XP_003508548.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
[Cricetulus griseus]
Length = 122
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/94 (91%), Positives = 90/94 (95%)
Query: 2 ERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
E +LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVK
Sbjct: 26 EIVLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVK 85
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
NCFIRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 86 NCFIRGSVVRYVQLPADEVDTQLLQDAARKEALQ 119
>gi|10863977|ref|NP_067000.1| U6 snRNA-associated Sm-like protein LSm2 [Homo sapiens]
gi|155372081|ref|NP_001094647.1| U6 snRNA-associated Sm-like protein LSm2 [Bos taurus]
gi|158533995|ref|NP_001103571.1| U6 snRNA-associated Sm-like protein LSm2 isoform 2 [Mus musculus]
gi|178056596|ref|NP_001116608.1| U6 snRNA-associated Sm-like protein LSm2 [Sus scrofa]
gi|226443174|ref|NP_001140070.1| U6 snRNA-associated Sm-like protein LSm2 [Salmo salar]
gi|260064052|ref|NP_001159394.1| LSM2 homolog, U6 small nuclear RNA associated isoform 2 [Rattus
norvegicus]
gi|386781369|ref|NP_001247614.1| U6 snRNA-associated Sm-like protein LSm2 [Macaca mulatta]
gi|73972304|ref|XP_532081.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Canis lupus
familiaris]
gi|291395796|ref|XP_002714328.1| PREDICTED: LSM2 homolog, U6 small nuclear RNA associated
[Oryctolagus cuniculus]
gi|296197733|ref|XP_002746407.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Callithrix
jacchus]
gi|297677734|ref|XP_002816713.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Pongo
abelii]
gi|327286769|ref|XP_003228102.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm2-like [Anolis
carolinensis]
gi|332246070|ref|XP_003272173.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Nomascus
leucogenys]
gi|332823648|ref|XP_518362.3| PREDICTED: uncharacterized protein LOC462569 [Pan troglodytes]
gi|348576468|ref|XP_003474009.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Cavia
porcellus]
gi|395832028|ref|XP_003789080.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Otolemur
garnettii]
gi|397523138|ref|XP_003831598.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Pan
paniscus]
gi|402866510|ref|XP_003897424.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Papio
anubis]
gi|403307821|ref|XP_003944381.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Saimiri
boliviensis boliviensis]
gi|426250528|ref|XP_004018987.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Ovis aries]
gi|10720079|sp|Q9Y333.1|LSM2_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm2; AltName:
Full=Protein G7b; AltName: Full=Small nuclear
ribonuclear protein D homolog; AltName: Full=snRNP core
Sm-like protein Sm-x5
gi|52783102|sp|O35900.1|LSM2_MOUSE RecName: Full=U6 snRNA-associated Sm-like protein LSm2; AltName:
Full=Protein G7b; AltName: Full=snRNP core Sm-like
protein Sm-x5
gi|5919145|gb|AAD56226.1|AF182288_1 U6 snRNA-associated Sm-like protein LSm2 [Homo sapiens]
gi|12239339|gb|AAG49438.1|AF136977_1 snRNP core SM-like protein SM-x5 [Homo sapiens]
gi|16118494|gb|AAL14450.1|AF397035_3 small ribonuclear protein G7b [Mus musculus]
gi|16118503|gb|AAL14458.1|AF397036_3 small ribonuclear protein G7b [Mus musculus]
gi|2463648|gb|AAB72037.1| snRNP core Sm protein homolog Sm-X5 [Mus musculus]
gi|4529895|gb|AAD21818.1| snRNP [Homo sapiens]
gi|5701852|emb|CAB52190.1| G7b protein [Homo sapiens]
gi|11225487|gb|AAG33023.1| SMX5-like protein [Homo sapiens]
gi|14327936|gb|AAH09192.1| LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|15277249|dbj|BAB63302.1| small nuclear ribonuclear protein D homolog [Homo sapiens]
gi|15679962|gb|AAH14288.1| Lsm2 protein [Mus musculus]
gi|49457288|emb|CAG46943.1| LSM2 [Homo sapiens]
gi|49457310|emb|CAG46954.1| LSM2 [Homo sapiens]
gi|74195973|dbj|BAE30544.1| unnamed protein product [Mus musculus]
gi|119623930|gb|EAX03525.1| LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|123988106|gb|ABM83829.1| LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[synthetic construct]
gi|124000059|gb|ABM87538.1| LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[synthetic construct]
gi|147225158|emb|CAN13335.1| LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Sus scrofa]
gi|148694757|gb|EDL26704.1| LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Mus musculus]
gi|149028025|gb|EDL83476.1| rCG38360, isoform CRA_b [Rattus norvegicus]
gi|151557081|gb|AAI50006.1| LSM2 protein [Bos taurus]
gi|208968015|dbj|BAG73846.1| U6 snRNA-associated Sm-like protein LSm2 [synthetic construct]
gi|221221672|gb|ACM09497.1| U6 snRNA-associated Sm-like protein LSm2 [Salmo salar]
gi|296474271|tpg|DAA16386.1| TPA: LSM2 homolog, U6 small nuclear RNA associated [Bos taurus]
gi|355561546|gb|EHH18178.1| hypothetical protein EGK_14728 [Macaca mulatta]
gi|355762482|gb|EHH61980.1| hypothetical protein EGM_20136 [Macaca fascicularis]
gi|380785271|gb|AFE64511.1| U6 snRNA-associated Sm-like protein LSm2 [Macaca mulatta]
gi|383411271|gb|AFH28849.1| U6 snRNA-associated Sm-like protein LSm2 [Macaca mulatta]
gi|384943564|gb|AFI35387.1| U6 snRNA-associated Sm-like protein LSm2 [Macaca mulatta]
gi|387019545|gb|AFJ51890.1| U6 snRNA-associated Sm-like protein LSm2 [Crotalus adamanteus]
gi|410206872|gb|JAA00655.1| LSM2 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410253898|gb|JAA14916.1| LSM2 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410290348|gb|JAA23774.1| LSM2 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410329143|gb|JAA33518.1| LSM2 homolog, U6 small nuclear RNA associated [Pan troglodytes]
Length = 95
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/92 (92%), Positives = 89/92 (96%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 61 FIRGSVVRYVQLPADEVDTQLLQDAARKEALQ 92
>gi|61097894|ref|NP_571571.1| U6 snRNA-associated Sm-like protein LSm2 [Danio rerio]
gi|55715812|gb|AAH85441.1| Smx5 [Danio rerio]
gi|156229994|gb|AAI52151.1| Smx5 [Danio rerio]
gi|182891394|gb|AAI64435.1| Smx5 protein [Danio rerio]
Length = 95
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/90 (94%), Positives = 88/90 (97%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP DEVDTQLLQDA RKEA
Sbjct: 61 FIRGSVVRYVQLPADEVDTQLLQDAARKEA 90
>gi|410920908|ref|XP_003973925.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Takifugu
rubripes]
Length = 104
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCF
Sbjct: 11 LFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCF 70
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
IRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 71 IRGSVVRYVQLPADEVDTQLLQDAARKEAMQ 101
>gi|410958854|ref|XP_003986029.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Felis catus]
Length = 98
Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCF
Sbjct: 5 LFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCF 64
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
IRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 65 IRGSVVRYVQLPADEVDTQLLQDAARKEALQ 95
>gi|344239170|gb|EGV95273.1| U6 snRNA-associated Sm-like protein LSm2 [Cricetulus griseus]
gi|351713156|gb|EHB16075.1| U6 snRNA-associated Sm-like protein LSm2, partial [Heterocephalus
glaber]
gi|440898787|gb|ELR50212.1| U6 snRNA-associated Sm-like protein LSm2, partial [Bos grunniens
mutus]
Length = 94
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCF
Sbjct: 1 LFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCF 60
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
IRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 61 IRGSVVRYVQLPADEVDTQLLQDAARKEALQ 91
>gi|395533886|ref|XP_003768980.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Sarcophilus
harrisii]
Length = 142
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCF
Sbjct: 49 LFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCF 108
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
IRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 109 IRGSVVRYVQLPADEVDTQLLQDAARKEAMQ 139
>gi|291230978|ref|XP_002735441.1| PREDICTED: LSM2 homolog, U6 small nuclear RNA associated-like
[Saccoglossus kowalevskii]
Length = 96
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/93 (90%), Positives = 89/93 (95%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQ+LNIKLTDISVTDP+KYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQFLNIKLTDISVTDPEKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
FIRGSVVRYVQLP DEVDTQLLQDA RKEA +
Sbjct: 61 FIRGSVVRYVQLPADEVDTQLLQDAARKEAAQS 93
>gi|334323708|ref|XP_001376243.2| PREDICTED: u6 snRNA-associated Sm-like protein LSm2-like
[Monodelphis domestica]
Length = 167
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCF
Sbjct: 74 LFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCF 133
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
IRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 134 IRGSVVRYVQLPADEVDTQLLQDAARKEAMQ 164
>gi|11138539|gb|AAG31434.1|AF204157_1 snRNP core protein SMX5d [Mus musculus]
Length = 119
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCF
Sbjct: 26 LFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCF 85
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
IRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 86 IRGSVVRYVQLPADEVDTQLLQDAARKEALQ 116
>gi|229365986|gb|ACQ57973.1| U6 snRNA-associated Sm-like protein LSm2 [Anoplopoma fimbria]
Length = 95
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/92 (91%), Positives = 88/92 (95%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICG LHSVDQYLNIKLTDISVTDP+KYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGALHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 61 FIRGSVVRYVQLPADEVDTQLLQDAARKEAMQ 92
>gi|260064054|ref|NP_001004073.1| LSM2 homolog, U6 small nuclear RNA associated isoform 1 [Rattus
norvegicus]
gi|46237602|emb|CAE83980.1| LSM2 homolog, U6 small nuclear RNA associated [S. cerevisiae]
[Rattus norvegicus]
gi|149028028|gb|EDL83479.1| rCG38360, isoform CRA_e [Rattus norvegicus]
Length = 131
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCF
Sbjct: 38 LFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCF 97
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
IRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 98 IRGSVVRYVQLPADEVDTQLLQDAARKEALQ 128
>gi|344307226|ref|XP_003422283.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Loxodonta
africana]
Length = 133
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCF
Sbjct: 40 LFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCF 99
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
IRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 100 IRGSVVRYVQLPADEVDTQLLQDAARKEALQ 130
>gi|13994221|ref|NP_085100.1| U6 snRNA-associated Sm-like protein LSm2 isoform 1 [Mus musculus]
gi|11138517|gb|AAG31423.1|AF204146_1 snRNP core protein SMX5 [Mus musculus]
gi|11138519|gb|AAG31424.1|AF204147_1 snRNP core protein SMX5 [Mus musculus]
gi|11138521|gb|AAG31425.1|AF204148_1 snRNP core protein SMX5 [Mus musculus]
gi|11138523|gb|AAG31426.1|AF204149_1 snRNP core protein SMX5 [Mus musculus]
gi|11138525|gb|AAG31427.1|AF204150_1 snRNP core protein SMX5 [Mus musculus]
gi|11138527|gb|AAG31428.1|AF204151_1 snRNP core protein SMX5 [Mus musculus]
gi|11138529|gb|AAG31429.1|AF204152_1 snRNP core protein SMX5 [Mus musculus]
gi|16118493|gb|AAL14449.1|AF397035_2 G7b alternative form [Mus musculus]
gi|16118502|gb|AAL14457.1|AF397036_2 G7b alternative form [Mus musculus]
gi|2463649|gb|AAB72038.1| snRNP core Sm protein homolog Sm-X5 [Mus musculus]
gi|3986753|gb|AAC84150.1| smRNP [Mus musculus]
gi|3986775|gb|AAC84171.1| smRNP [Mus musculus]
gi|29436560|gb|AAH49543.1| LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Mus
musculus]
gi|148694756|gb|EDL26703.1| LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Mus musculus]
Length = 131
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCF
Sbjct: 38 LFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCF 97
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
IRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 98 IRGSVVRYVQLPADEVDTQLLQDAARKEALQ 128
>gi|194223357|ref|XP_001491793.2| PREDICTED: u6 snRNA-associated Sm-like protein LSm2-like [Equus
caballus]
Length = 114
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCF
Sbjct: 21 LFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCF 80
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
IRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 81 IRGSVVRYVQLPADEVDTQLLQDAARKEALQ 111
>gi|270001426|gb|EEZ97873.1| hypothetical protein TcasGA2_TC000255 [Tribolium castaneum]
Length = 95
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/95 (89%), Positives = 89/95 (93%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTD +KYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDTEKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLP DEVDTQLLQD+ RKEA TR
Sbjct: 61 FIRGSVVRYVQLPADEVDTQLLQDSARKEATAPTR 95
>gi|198426293|ref|XP_002128585.1| PREDICTED: similar to LSM2 homolog, U6 small nuclear RNA
associated [Ciona intestinalis]
Length = 95
Score = 177 bits (450), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/95 (88%), Positives = 90/95 (94%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
F+RGSVVRYVQLP DEVDT LLQDA RKEAV + +
Sbjct: 61 FVRGSVVRYVQLPADEVDTGLLQDAARKEAVQSKQ 95
>gi|91077956|ref|XP_967320.1| PREDICTED: similar to smx5 [Tribolium castaneum]
Length = 99
Score = 177 bits (449), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/96 (88%), Positives = 89/96 (92%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTD +KYPHMLSVKN
Sbjct: 4 HVLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDTEKYPHMLSVKN 63
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
CFIRGSVVRYVQLP DEVDTQLLQD+ RKEA TR
Sbjct: 64 CFIRGSVVRYVQLPADEVDTQLLQDSARKEATAPTR 99
>gi|170582506|ref|XP_001896160.1| U6 snRNA-associated Sm-like protein LSm2 [Brugia malayi]
gi|158596693|gb|EDP34995.1| U6 snRNA-associated Sm-like protein LSm2, putative [Brugia
malayi]
Length = 99
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/95 (86%), Positives = 90/95 (94%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLN+KLTDISVTD ++YPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNMKLTDISVTDSERYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLP D+VDTQLLQDA+RKE + A R
Sbjct: 61 FIRGSVVRYVQLPADQVDTQLLQDASRKEVMQAKR 95
>gi|402591762|gb|EJW85691.1| small nuclear ribonucleoprotein LSM2 [Wuchereria bancrofti]
Length = 99
Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/95 (86%), Positives = 90/95 (94%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLN+KLTDISVTD ++YPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNMKLTDISVTDSERYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLP D+VDTQLLQDA+RKE + A R
Sbjct: 61 FIRGSVVRYVQLPADQVDTQLLQDASRKEVMQAKR 95
>gi|339521887|gb|AEJ84108.1| U6 snRNA-associated Sm-like protein LSm2 [Capra hircus]
Length = 95
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/92 (90%), Positives = 87/92 (94%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYV P DEVDTQLLQDA RKEA+
Sbjct: 61 FIRGSVVRYVHWPADEVDTQLLQDAARKEALQ 92
>gi|405969386|gb|EKC34360.1| U6 snRNA-associated Sm-like protein LSm2, partial [Crassostrea
gigas]
Length = 96
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/91 (91%), Positives = 86/91 (94%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQ+LNIKLTDI+VTDPDKYPHMLSVKNCF
Sbjct: 2 LFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQFLNIKLTDITVTDPDKYPHMLSVKNCF 61
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
IRGSVVRYVQLP DE DTQLLQDA RKEA
Sbjct: 62 IRGSVVRYVQLPADECDTQLLQDAARKEAAQ 92
>gi|241742042|ref|XP_002414155.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508009|gb|EEC17463.1| conserved hypothetical protein [Ixodes scapularis]
gi|442754033|gb|JAA69176.1| Putative snrnp core protein [Ixodes ricinus]
Length = 96
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/95 (87%), Positives = 90/95 (94%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDI+VTD +KYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDINVTDTEKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLP DEVDTQLLQDA RKEA + ++
Sbjct: 61 FIRGSVVRYVQLPADEVDTQLLQDAARKEASSQSK 95
>gi|393907050|gb|EFO18420.2| U6 snRNA-associated Sm-like protein LSm2 [Loa loa]
Length = 99
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/95 (85%), Positives = 90/95 (94%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLN+KLTDISVTD ++YPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNMKLTDISVTDSERYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLP D+VDTQLLQDA+RKE + + R
Sbjct: 61 FIRGSVVRYVQLPADQVDTQLLQDASRKEVMQSKR 95
>gi|346470701|gb|AEO35195.1| hypothetical protein [Amblyomma maculatum]
gi|427786045|gb|JAA58474.1| Putative u6 snrna-associated sm-like protein lsm2 [Rhipicephalus
pulchellus]
Length = 95
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/90 (92%), Positives = 87/90 (96%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+S+CGTLHSVDQYLNIKLTDISVT+ DKYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSMCGTLHSVDQYLNIKLTDISVTEQDKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP DEVDTQLLQDA RKEA
Sbjct: 61 FIRGSVVRYVQLPADEVDTQLLQDAARKEA 90
>gi|193601302|ref|XP_001946996.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm2-like
[Acyrthosiphon pisum]
Length = 94
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/90 (91%), Positives = 86/90 (95%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKL DISVTDP+KYPHM SV+NC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLVDISVTDPEKYPHMASVRNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP DEVDTQLLQDA RKEA
Sbjct: 61 FIRGSVVRYVQLPADEVDTQLLQDAARKEA 90
>gi|312087894|ref|XP_003145650.1| snRNP core protein SMX5d [Loa loa]
Length = 132
Score = 174 bits (440), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/94 (86%), Positives = 89/94 (94%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLN+KLTDISVTD ++YPHMLSVKNCF
Sbjct: 35 LFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNMKLTDISVTDSERYPHMLSVKNCF 94
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
IRGSVVRYVQLP D+VDTQLLQDA+RKE + + R
Sbjct: 95 IRGSVVRYVQLPADQVDTQLLQDASRKEVMQSKR 128
>gi|321473278|gb|EFX84246.1| hypothetical protein DAPPUDRAFT_209723 [Daphnia pulex]
Length = 95
Score = 173 bits (439), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 82/93 (88%), Positives = 89/93 (95%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDIS+TDPDKYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISITDPDKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
FIRGSVVRYVQLP +EVD QLLQDA RKE+ ++
Sbjct: 61 FIRGSVVRYVQLPPEEVDHQLLQDAARKESQHS 93
>gi|443704446|gb|ELU01508.1| hypothetical protein CAPTEDRAFT_111414, partial [Capitella
teleta]
Length = 95
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 87/94 (92%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKD+VVELKND+SICGTLHSVDQ+LNIKLTDISVTDPDKYPHMLSVK CF
Sbjct: 1 LFYSFFKSLVGKDLVVELKNDLSICGTLHSVDQFLNIKLTDISVTDPDKYPHMLSVKTCF 60
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
IRGSVVRYVQLP DE DTQLLQDA RKEA + +
Sbjct: 61 IRGSVVRYVQLPADECDTQLLQDAARKEATQSKQ 94
>gi|2113818|emb|CAB05859.1| AmphiBrf43 [Branchiostoma floridae]
Length = 91
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/90 (91%), Positives = 86/90 (95%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQ+LNIKLTDISVTDP+KYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQFLNIKLTDISVTDPEKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQL DE DTQLLQDA RKEA
Sbjct: 61 FIRGSVVRYVQLSADECDTQLLQDAARKEA 90
>gi|324536502|gb|ADY49465.1| U6 snRNA-associated Sm-like protein LSm2 [Ascaris suum]
Length = 95
Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 80/95 (84%), Positives = 88/95 (92%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLN+KLTDISV D ++YPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNMKLTDISVGDSERYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLP D+VDTQLLQDA+RKE + R
Sbjct: 61 FIRGSVVRYVQLPADQVDTQLLQDASRKEVMQTKR 95
>gi|115774627|ref|XP_792582.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
[Strongylocentrotus purpuratus]
Length = 95
Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/93 (84%), Positives = 86/93 (92%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDV+VELKND+SI GTLHSVDQ+LNIKLTDISVTD ++YPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKDVIVELKNDLSIGGTLHSVDQFLNIKLTDISVTDQERYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
FIRGSVVRYVQLP DE DTQLLQDA RKEA +
Sbjct: 61 FIRGSVVRYVQLPADECDTQLLQDAARKEATQS 93
>gi|340374852|ref|XP_003385951.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm2-like
[Amphimedon queenslandica]
Length = 112
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/94 (82%), Positives = 85/94 (90%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGK+V+VELKND+SI GTLHSVDQYLNIKLTDIS+ DPDKYPHMLSVKNCF
Sbjct: 3 LFYSFFKSLVGKEVIVELKNDLSIHGTLHSVDQYLNIKLTDISIPDPDKYPHMLSVKNCF 62
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
IRGSV+RYVQLP +EVDT LLQDATRKE +
Sbjct: 63 IRGSVIRYVQLPAEEVDTGLLQDATRKELAQGKQ 96
>gi|156365662|ref|XP_001626763.1| predicted protein [Nematostella vectensis]
gi|156213651|gb|EDO34663.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/91 (85%), Positives = 87/91 (95%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGK+V+VELKND+S+ GTL SVDQ+LN+KLTDI VTDPDKYPHMLSVKNC
Sbjct: 1 MLFYSFFKSLVGKEVIVELKNDLSVHGTLDSVDQFLNLKLTDIDVTDPDKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
FIRGSVVRYVQLP +EVDTQLLQDATRKEA+
Sbjct: 61 FIRGSVVRYVQLPSEEVDTQLLQDATRKEAM 91
>gi|307181671|gb|EFN69174.1| U6 snRNA-associated Sm-like protein LSm2 [Camponotus floridanus]
Length = 95
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/92 (84%), Positives = 85/92 (92%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSL+GKDVVVELKND+SICGTL+SVDQYLNIKL DISVTD +KYPHMLSVKNCF
Sbjct: 1 LFYSFFKSLIGKDVVVELKNDLSICGTLYSVDQYLNIKLADISVTDSEKYPHMLSVKNCF 60
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
IRGSVVRYVQLP DEVD LL +A R+EA+NA
Sbjct: 61 IRGSVVRYVQLPVDEVDIHLLTEAARREAMNA 92
>gi|332019962|gb|EGI60422.1| U6 snRNA-associated Sm-like protein LSm2 [Acromyrmex echinatior]
Length = 96
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/92 (84%), Positives = 85/92 (92%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSL+GKDVVVELKND+SICGTL+SVDQYLNIKL DISVTD +KYPHMLSVKNCF
Sbjct: 2 LFYSFFKSLIGKDVVVELKNDLSICGTLYSVDQYLNIKLADISVTDSEKYPHMLSVKNCF 61
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
IRGSVVRYVQLP DEVD LL +A R+EA+NA
Sbjct: 62 IRGSVVRYVQLPVDEVDIHLLTEAARREAMNA 93
>gi|391342618|ref|XP_003745613.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
[Metaseiulus occidentalis]
Length = 91
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/89 (86%), Positives = 85/89 (95%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKL DISVTDP+K+PH+ SVKNC
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDISICGTLHSVDQYLNIKLVDISVTDPEKHPHIQSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGSVVRY+QLP ++VDTQLLQDA RKE
Sbjct: 61 FIRGSVVRYIQLPHEDVDTQLLQDAVRKE 89
>gi|119623931|gb|EAX03526.1| LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
Length = 113
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/84 (94%), Positives = 82/84 (97%)
Query: 11 KSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVV 70
KSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCFIRGSVV
Sbjct: 26 KSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVV 85
Query: 71 RYVQLPGDEVDTQLLQDATRKEAV 94
RYVQLP DEVDTQLLQDA RKEA+
Sbjct: 86 RYVQLPADEVDTQLLQDAARKEAL 109
>gi|392921511|ref|NP_001256511.1| Protein GUT-2, isoform a [Caenorhabditis elegans]
gi|58081790|emb|CAB03328.3| Protein GUT-2, isoform a [Caenorhabditis elegans]
Length = 97
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/93 (79%), Positives = 89/93 (95%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFKSLVGKDVVVELKND+SICGTLHSVDQYLN+KLTDI+V+DP+++PHM+SVKNC
Sbjct: 1 MLFFSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNMKLTDITVSDPERFPHMVSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
FIRGSVVRYVQLP D+VDTQLL D+ RKE +++
Sbjct: 61 FIRGSVVRYVQLPSDQVDTQLLADSCRKELLDS 93
>gi|308504419|ref|XP_003114393.1| CRE-GUT-2 protein [Caenorhabditis remanei]
gi|308261778|gb|EFP05731.1| CRE-GUT-2 protein [Caenorhabditis remanei]
Length = 97
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/93 (78%), Positives = 88/93 (94%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFKSLVGKDVV+ELKND+SICGTLHSVDQYLN+KLTDI+V+DP+++PHM+SVKNC
Sbjct: 1 MLFFSFFKSLVGKDVVIELKNDLSICGTLHSVDQYLNMKLTDITVSDPERFPHMVSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
FIRGSVVRYVQLP D+VDTQLL D+ RKE ++
Sbjct: 61 FIRGSVVRYVQLPSDQVDTQLLADSCRKELADS 93
>gi|195998846|ref|XP_002109291.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190587415|gb|EDV27457.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 106
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/89 (80%), Positives = 82/89 (92%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFKSLVGK+V+VELKND+S+CG LHSVDQYLNIKL DISV D +KYPHM+SVKNC
Sbjct: 1 MLFFSFFKSLVGKEVIVELKNDLSVCGILHSVDQYLNIKLVDISVPDTEKYPHMISVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGSVVRYV LP +E+D QLLQDATRKE
Sbjct: 61 FIRGSVVRYVHLPAEEIDVQLLQDATRKE 89
>gi|121543877|gb|ABM55603.1| LSM2-like protein [Maconellicoccus hirsutus]
Length = 96
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/96 (77%), Positives = 86/96 (89%), Gaps = 1/96 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGK+V++ELKND+S+CGTL SVDQYLN+KL +++V D +K+PHMLSV NC
Sbjct: 1 MLFYSFFKSLVGKEVIIELKNDLSMCGTLSSVDQYLNLKLKEVTVNDTEKHPHMLSVSNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA-VNATR 98
FIRGSVVRYVQLP DEVDTQLLQDATR EA N TR
Sbjct: 61 FIRGSVVRYVQLPADEVDTQLLQDATRNEAEKNVTR 96
>gi|60687558|gb|AAX30112.1| LSM2 homolog, U6 small nuclear RNA associated [Schistosoma
japonicum]
gi|226486678|emb|CAX74416.1| U6 snRNA-associated Sm-like protein LSm2 [Schistosoma japonicum]
gi|226486680|emb|CAX74417.1| U6 snRNA-associated Sm-like protein LSm2 [Schistosoma japonicum]
Length = 98
Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 72/90 (80%), Positives = 83/90 (92%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LVGKDV++ELKND+ ICGTLHSVDQY N KLTDISVTDP+K+PHMLSVKNC
Sbjct: 1 MLFFSFFKTLVGKDVLIELKNDLCICGTLHSVDQYHNFKLTDISVTDPEKHPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGS+VRYVQLP DE DT LQ+A+RKEA
Sbjct: 61 FIRGSIVRYVQLPADECDTIELQNASRKEA 90
>gi|313234834|emb|CBY24778.1| unnamed protein product [Oikopleura dioica]
gi|313246057|emb|CBY35020.1| unnamed protein product [Oikopleura dioica]
Length = 99
Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/98 (75%), Positives = 84/98 (85%), Gaps = 4/98 (4%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGK+V VELKND++I GTLHSVDQYLNIKL DI VT+ +KYPH+LSVKNC
Sbjct: 1 MLFYSFFKSLVGKEVTVELKNDLAITGTLHSVDQYLNIKLNDIFVTEQEKYPHLLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA----VNAT 97
FIRGSVVRYV+LP +E+D QLLQD RKEA NAT
Sbjct: 61 FIRGSVVRYVRLPAEEIDHQLLQDTARKEAESNRTNAT 98
>gi|221127676|ref|XP_002162398.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like [Hydra
magnipapillata]
Length = 103
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/90 (78%), Positives = 83/90 (92%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFKSLVGK+V+VELKND+SI G L SVDQ+LNIKLTDISVTD ++YPHM+SVKNC
Sbjct: 1 MLFYSFFKSLVGKEVIVELKNDLSISGVLDSVDQFLNIKLTDISVTDTERYPHMMSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
F+RGSVVRYVQLP +++D QLLQDA RKEA
Sbjct: 61 FLRGSVVRYVQLPPEDIDVQLLQDAARKEA 90
>gi|426352541|ref|XP_004043770.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Gorilla
gorilla gorilla]
Length = 186
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 80/102 (78%), Gaps = 10/102 (9%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSI----------CGTLHSVDQYLNIKLTDISVTDPDK 53
+LFYSFFKSLVGKDVVVELKND+S G YLNIKLTDISVTDP+K
Sbjct: 82 MLFYSFFKSLVGKDVVVELKNDLSTGNASDIDVYRLGPQSKTSTYLNIKLTDISVTDPEK 141
Query: 54 YPHMLSVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
YPHMLSVKNCFIRGSVVRYVQLP DEVDTQLLQDA RKEA+
Sbjct: 142 YPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKEALQ 183
>gi|325182501|emb|CCA16956.1| 6 snRNAassociated Smlike protein putative [Albugo laibachii Nc14]
Length = 94
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 82/95 (86%), Gaps = 1/95 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFK+LVGK+V VELKNDV++ GTLHSVDQYLN+KL +SV + DKYP ++++KNC
Sbjct: 1 MLFYSFFKTLVGKEVAVELKNDVALMGTLHSVDQYLNMKLMGVSVVESDKYPQLMNMKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSV+RYVQ+P EVDT LLQDA R+EA NA +
Sbjct: 61 FIRGSVIRYVQIPAQEVDTDLLQDAARREA-NANK 94
>gi|326428074|gb|EGD73644.1| LSM domain-containing protein [Salpingoeca sp. ATCC 50818]
Length = 112
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 81/91 (89%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
++LF SFFK+LVGK VVVELKND+SI GTL SVDQ+LNIKL DI+V + DKY HM+SVKN
Sbjct: 17 KMLFTSFFKTLVGKTVVVELKNDLSIQGTLTSVDQFLNIKLDDITVGNVDKYAHMVSVKN 76
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
CFIRGSV+RY+QLP + VDTQLLQDATR+EA
Sbjct: 77 CFIRGSVIRYIQLPPEHVDTQLLQDATRREA 107
>gi|299470069|emb|CBN79246.1| Sm-like protein LSm2 [Ectocarpus siliculosus]
Length = 94
Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 80/93 (86%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFK+LVGK++ VELKNDV++ GTLHSVDQYLN+KLTD+ V D ++YP + ++KNC
Sbjct: 1 MLFYSFFKTLVGKEIAVELKNDVALTGTLHSVDQYLNVKLTDVQVVDAERYPQLGAIKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
FIRGSVVRY+Q+P +VDT+LLQDA RKE+
Sbjct: 61 FIRGSVVRYIQIPSADVDTELLQDACRKESAQG 93
>gi|356504912|ref|XP_003521238.1| PREDICTED: BTB/POZ and MATH domain-containing protein 2-like
[Glycine max]
Length = 497
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 80/91 (87%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
R LF+S+FK LVG++V+VELKND++I GTLHSVDQYLNIKL + SV + +KYPHMLSV+N
Sbjct: 404 RRLFFSYFKDLVGREVIVELKNDLAIKGTLHSVDQYLNIKLENTSVVNQEKYPHMLSVRN 463
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
CFIRGSVVRYVQLP + VD +LL DATR+EA
Sbjct: 464 CFIRGSVVRYVQLPPEGVDIELLHDATRREA 494
>gi|320166739|gb|EFW43638.1| snRNP core protein SMX5 [Capsaspora owczarzaki ATCC 30864]
Length = 115
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 80/91 (87%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFK+LV K+VVVELKND+ I GTLHSVDQ+LNIKL DISV +P+KYPHM+SVK CF
Sbjct: 20 LFYSFFKTLVDKEVVVELKNDLCITGTLHSVDQFLNIKLLDISVAEPEKYPHMVSVKTCF 79
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
IRGSVVRYV+L VDT+LLQDA+R+EA N
Sbjct: 80 IRGSVVRYVRLNPAFVDTELLQDASRREANN 110
>gi|296086695|emb|CBI32330.3| unnamed protein product [Vitis vinifera]
Length = 137
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 78/90 (86%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S+FK LVG++V VELKND++I GTLHSVDQYLNIKL + V D DKYPHMLSV+NC
Sbjct: 45 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 104
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP + VD +LL DATR+EA
Sbjct: 105 FIRGSVVRYVQLPPEGVDIELLHDATRREA 134
>gi|359479792|ref|XP_002271534.2| PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Vitis
vinifera]
Length = 489
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 78/91 (85%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
R LF+S+FK LVG++V VELKND++I GTLHSVDQYLNIKL + V D DKYPHMLSV+N
Sbjct: 396 RRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 455
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
CFIRGSVVRYVQLP + VD +LL DATR+EA
Sbjct: 456 CFIRGSVVRYVQLPPEGVDIELLHDATRREA 486
>gi|444721118|gb|ELW61871.1| U6 snRNA-associated Sm-like protein LSm2 [Tupaia chinensis]
Length = 92
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/81 (82%), Positives = 73/81 (90%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G D++ ++ VSICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCFIRGSVVRYVQ
Sbjct: 9 GDDLLGDMVKAVSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQ 68
Query: 75 LPGDEVDTQLLQDATRKEAVN 95
LP DEVDTQLLQDA RKEA+
Sbjct: 69 LPADEVDTQLLQDAARKEALQ 89
>gi|351724271|ref|NP_001236540.1| uncharacterized protein LOC100305778 [Glycine max]
gi|255626583|gb|ACU13636.1| unknown [Glycine max]
Length = 93
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 80/90 (88%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S+FK LVG++V+VELKND++I GTLHSVDQYLNIKL + SV + +KYPHMLSV+NC
Sbjct: 1 MLFFSYFKDLVGREVIVELKNDLAIKGTLHSVDQYLNIKLENTSVVNQEKYPHMLSVRNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP + VD +LL DATR+EA
Sbjct: 61 FIRGSVVRYVQLPPEGVDIELLHDATRREA 90
>gi|302783196|ref|XP_002973371.1| hypothetical protein SELMODRAFT_232056 [Selaginella
moellendorffii]
gi|302789528|ref|XP_002976532.1| hypothetical protein SELMODRAFT_175720 [Selaginella
moellendorffii]
gi|300155570|gb|EFJ22201.1| hypothetical protein SELMODRAFT_175720 [Selaginella
moellendorffii]
gi|300159124|gb|EFJ25745.1| hypothetical protein SELMODRAFT_232056 [Selaginella
moellendorffii]
Length = 93
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 77/90 (85%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S+FK LVGK+V VELKND++I G LHSVDQYLNIKL +I V D KYPHM+SVKNC
Sbjct: 1 MLFFSYFKELVGKEVTVELKNDLAITGVLHSVDQYLNIKLENIKVVDEIKYPHMMSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP D VD ++L DATR+EA
Sbjct: 61 FIRGSVVRYVQLPVDGVDVEILHDATRREA 90
>gi|449436291|ref|XP_004135926.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like isoform
1 [Cucumis sativus]
gi|449436293|ref|XP_004135927.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like isoform
2 [Cucumis sativus]
gi|449436295|ref|XP_004135928.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like isoform
3 [Cucumis sativus]
gi|449489026|ref|XP_004158193.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like isoform
1 [Cucumis sativus]
gi|449489028|ref|XP_004158194.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like isoform
2 [Cucumis sativus]
gi|449489032|ref|XP_004158195.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like isoform
3 [Cucumis sativus]
Length = 93
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 78/90 (86%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S+FK LVG++V VELKND++I GTLHSVDQYLNIKL + V D +KYPHMLSV+NC
Sbjct: 1 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQEKYPHMLSVRNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP D VD +LL DATR+EA
Sbjct: 61 FIRGSVVRYVQLPPDGVDVELLHDATRREA 90
>gi|384247675|gb|EIE21161.1| Sm-D1 protein [Coccomyxa subellipsoidea C-169]
Length = 92
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 77/90 (85%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYS+FK+LVGK+V VELKND++I G LHSVDQYLNIKL ++ V + KYPHM+SV+NC
Sbjct: 1 MLFYSYFKTLVGKEVTVELKNDLAITGILHSVDQYLNIKLNNVHVVNEQKYPHMMSVRNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP VD +LL DATR+EA
Sbjct: 61 FIRGSVVRYVQLPPGSVDVELLHDATRREA 90
>gi|307105968|gb|EFN54215.1| hypothetical protein CHLNCDRAFT_24936 [Chlorella variabilis]
Length = 93
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 77/90 (85%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYS+FK+LVGK+V VELKND++I GTLHSVDQYLNIKL +I V + KYPHMLSV+ C
Sbjct: 1 MLFYSYFKTLVGKEVTVELKNDLAITGTLHSVDQYLNIKLNNIRVVNEQKYPHMLSVRAC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
F+RGSVVRYVQLP VD +LL DATR+EA
Sbjct: 61 FVRGSVVRYVQLPPGSVDVELLHDATRREA 90
>gi|223995383|ref|XP_002287375.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976491|gb|EED94818.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 97
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 80/88 (90%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LF+SFFK+LVGK++ VELKNDV + GTLHSVDQYLNIKLT++SV + DKYP ++S+KNCF
Sbjct: 2 LFFSFFKTLVGKEIAVELKNDVVLTGTLHSVDQYLNIKLTNVSVVNQDKYPQLMSLKNCF 61
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKE 92
IRGSVVRYVQ+ ++VDT+LLQDATRKE
Sbjct: 62 IRGSVVRYVQINPNDVDTELLQDATRKE 89
>gi|357511085|ref|XP_003625831.1| SnRNP core Sm protein Sm-X5-like protein [Medicago truncatula]
gi|355500846|gb|AES82049.1| SnRNP core Sm protein Sm-X5-like protein [Medicago truncatula]
gi|388519597|gb|AFK47860.1| unknown [Lotus japonicus]
Length = 93
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 78/90 (86%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S+FK LVG++V VELKND++I GTLHSVDQYLNIKL + V D DKYPHMLSV+NC
Sbjct: 1 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP + VD +LL DATR+EA
Sbjct: 61 FIRGSVVRYVQLPPEGVDIELLHDATRREA 90
>gi|255567664|ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus communis]
gi|223535995|gb|EEF37654.1| Speckle-type POZ protein, putative [Ricinus communis]
Length = 500
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 77/91 (84%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
R LF+S+FK LVG++V VELKND++I GTLHSVDQYLNIKL + V D DKYPHMLSV+N
Sbjct: 407 RRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRN 466
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
CFIRGSVVRYVQLP + VD LL DATR+EA
Sbjct: 467 CFIRGSVVRYVQLPPEGVDIDLLHDATRREA 497
>gi|224073260|ref|XP_002304049.1| predicted protein [Populus trichocarpa]
gi|224118384|ref|XP_002331469.1| predicted protein [Populus trichocarpa]
gi|118484877|gb|ABK94305.1| unknown [Populus trichocarpa]
gi|222841481|gb|EEE79028.1| predicted protein [Populus trichocarpa]
gi|222873547|gb|EEF10678.1| predicted protein [Populus trichocarpa]
Length = 93
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 77/90 (85%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S+FK LVGK+V VELKND++I GTLHSVDQYLNIKL + V D DKYPHMLSV+NC
Sbjct: 1 MLFFSYFKDLVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP + VD LL DATR+EA
Sbjct: 61 FIRGSVVRYVQLPPEGVDVDLLHDATRREA 90
>gi|388498296|gb|AFK37214.1| unknown [Medicago truncatula]
Length = 93
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 78/90 (86%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S+FK LVG++V VELKND++I GTLHSVDQYLNIKL + V D D+YPHMLSV+NC
Sbjct: 1 MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDRYPHMLSVRNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP + VD +LL DATR+EA
Sbjct: 61 FIRGSVVRYVQLPPEGVDIELLHDATRREA 90
>gi|348672729|gb|EGZ12549.1| hypothetical protein PHYSODRAFT_317573 [Phytophthora sojae]
Length = 99
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 79/93 (84%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
M LLFYSFFK+LVGK+V VELKNDV++ G L SVDQYLNIKL ++SV + DK+P ++++
Sbjct: 1 MNLLLFYSFFKTLVGKEVAVELKNDVALMGVLDSVDQYLNIKLLNVSVVEGDKFPQLMNM 60
Query: 61 KNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
KNCFIRGS +RYVQ+P EVDT+LLQDA R+EA
Sbjct: 61 KNCFIRGSSIRYVQIPAGEVDTELLQDAARREA 93
>gi|18379085|ref|NP_563682.1| small nuclear ribonucleoprotein-like protein [Arabidopsis
thaliana]
gi|297848550|ref|XP_002892156.1| hypothetical protein ARALYDRAFT_470311 [Arabidopsis lyrata subsp.
lyrata]
gi|98961007|gb|ABF58987.1| At1g03330 [Arabidopsis thaliana]
gi|297337998|gb|EFH68415.1| hypothetical protein ARALYDRAFT_470311 [Arabidopsis lyrata subsp.
lyrata]
gi|332189439|gb|AEE27560.1| small nuclear ribonucleoprotein-like protein [Arabidopsis
thaliana]
Length = 93
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 76/90 (84%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S+FK LVG++V VELKND++I GTLHSVDQYLNIKL + V D DKYPHMLSV+NC
Sbjct: 1 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP D VD LL DA R+EA
Sbjct: 61 FIRGSVVRYVQLPKDGVDVDLLHDAARREA 90
>gi|168061307|ref|XP_001782631.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665864|gb|EDQ52534.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 93
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 76/90 (84%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S+FK LVGK+V+VELKND++I G LHSVDQYLNIKL + V D KYPHMLSVKNC
Sbjct: 1 MLFFSYFKELVGKEVIVELKNDLAISGILHSVDQYLNIKLENTRVVDDTKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP D VD +L DATR+EA
Sbjct: 61 FIRGSVVRYVQLPPDGVDVDILHDATRREA 90
>gi|118483945|gb|ABK93861.1| unknown [Populus trichocarpa]
Length = 93
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 76/90 (84%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S+FK LVGK+V VELKND++I G LHSVDQYLNIKL + V D DKYPHMLSV+NC
Sbjct: 1 MLFFSYFKDLVGKEVTVELKNDLAIRGNLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP + VD LL DATR+EA
Sbjct: 61 FIRGSVVRYVQLPPEGVDVDLLHDATRREA 90
>gi|226510250|ref|NP_001152698.1| snRNP core Sm protein Sm-X5-like protein [Zea mays]
gi|195659125|gb|ACG49030.1| snRNP core Sm protein Sm-X5-like protein [Zea mays]
gi|413917383|gb|AFW57315.1| snRNP core Sm protein Sm-X5-like protein [Zea mays]
Length = 93
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 76/90 (84%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S+FK LVGK+V VELKND++I GTLHSVDQYLNIKL + V D DKYPHMLSV+NC
Sbjct: 1 MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV LP D VD +L DATR+EA
Sbjct: 61 FIRGSVVRYVLLPQDGVDVDILHDATRREA 90
>gi|218200492|gb|EEC82919.1| hypothetical protein OsI_27848 [Oryza sativa Indica Group]
Length = 120
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 75/89 (84%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LF+S+FK LVGK+V VELKND++I GTLHSVDQYLNIKL + V D DKYPHMLSV+NCF
Sbjct: 29 LFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 88
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
IRGSVVRYV LP D VD +L DATR+EA
Sbjct: 89 IRGSVVRYVLLPQDGVDIDILHDATRREA 117
>gi|297607988|ref|NP_001061016.2| Os08g0154700 [Oryza sativa Japonica Group]
gi|242078209|ref|XP_002443873.1| hypothetical protein SORBIDRAFT_07g003620 [Sorghum bicolor]
gi|357145002|ref|XP_003573488.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
[Brachypodium distachyon]
gi|195656753|gb|ACG47844.1| snRNP core Sm protein Sm-X5-like protein [Zea mays]
gi|215769192|dbj|BAH01421.1| unnamed protein product [Oryza sativa Japonica Group]
gi|241940223|gb|EES13368.1| hypothetical protein SORBIDRAFT_07g003620 [Sorghum bicolor]
gi|255678156|dbj|BAF22930.2| Os08g0154700 [Oryza sativa Japonica Group]
gi|326493970|dbj|BAJ85447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512672|dbj|BAJ99691.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326530750|dbj|BAK01173.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|413921285|gb|AFW61217.1| snRNP core Sm protein Sm-X5-like protein [Zea mays]
Length = 93
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 76/90 (84%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S+FK LVGK+V VELKND++I GTLHSVDQYLNIKL + V D DKYPHMLSV+NC
Sbjct: 1 MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV LP D VD +L DATR+EA
Sbjct: 61 FIRGSVVRYVLLPQDGVDIDILHDATRREA 90
>gi|116780108|gb|ABK21554.1| unknown [Picea sitchensis]
gi|116790929|gb|ABK25794.1| unknown [Picea sitchensis]
Length = 93
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 76/90 (84%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S+FK LVGK+V VELKND++I GTLHSVDQYLNIKL + V + DKYPHMLSVKNC
Sbjct: 1 MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVEQDKYPHMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV LP D VD +L DATR+EA
Sbjct: 61 FIRGSVVRYVLLPPDGVDVDILHDATRREA 90
>gi|11138533|gb|AAG31431.1|AF204154_1 snRNP core protein SMX5b [Mus musculus]
gi|11138535|gb|AAG31432.1|AF204155_1 snRNP core protein SMX5b [Mus musculus]
Length = 78
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/74 (87%), Positives = 68/74 (91%)
Query: 22 LKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPGDEVD 81
L +SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCFIRGSVVRYVQLP DEVD
Sbjct: 2 LPAGLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVD 61
Query: 82 TQLLQDATRKEAVN 95
TQLLQDA RKEA+
Sbjct: 62 TQLLQDAARKEALQ 75
>gi|3850571|gb|AAC72111.1| Similar to gb|U85207 snRNP core Sm protein homolog Sm-X5 from Mus
musculus. EST gb|AA612141 comes from this gene
[Arabidopsis thaliana]
Length = 114
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 75/89 (84%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LF+S+FK LVG++V VELKND++I GTLHSVDQYLNIKL + V D DKYPHMLSV+NCF
Sbjct: 23 LFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCF 82
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
IRGSVVRYVQLP D VD LL DA R+EA
Sbjct: 83 IRGSVVRYVQLPKDGVDVDLLHDAARREA 111
>gi|37806009|dbj|BAC99422.1| putative snRNP core protein SMX5d [Oryza sativa Japonica Group]
Length = 288
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 75/90 (83%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
LF+S+FK LVGK+V VELKND++I GTLHSVDQYLNIKL + V D DKYPHMLSV+NC
Sbjct: 196 WLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 255
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV LP D VD +L DATR+EA
Sbjct: 256 FIRGSVVRYVLLPQDGVDIDILHDATRREA 285
>gi|21553911|gb|AAM62994.1| snRNP core Sm protein Sm-X5-like protein [Arabidopsis thaliana]
Length = 93
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 75/90 (83%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S+FK LVG++V VELKND++I GTLHSVDQYLNIKL + V D DKYPHMLSV+NC
Sbjct: 1 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP D VD LL A R+EA
Sbjct: 61 FIRGSVVRYVQLPKDGVDVDLLHGAARREA 90
>gi|397569438|gb|EJK46745.1| hypothetical protein THAOC_34574 [Thalassiosira oceanica]
Length = 849
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 60/89 (67%), Positives = 78/89 (87%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LVG+++ VELKNDV + GTLHSVDQYLNIKLT + V + D+YP ++++KNC
Sbjct: 753 MLFFSFFKTLVGREIAVELKNDVVLTGTLHSVDQYLNIKLTSVRVVNQDRYPQLVALKNC 812
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGSVVRYVQ+ +V+T+LLQDATRKE
Sbjct: 813 FIRGSVVRYVQITPSDVNTELLQDATRKE 841
>gi|301093933|ref|XP_002997811.1| U6 snRNA-associated Sm-like protein LSm2, putative [Phytophthora
infestans T30-4]
gi|262109897|gb|EEY67949.1| U6 snRNA-associated Sm-like protein LSm2, putative [Phytophthora
infestans T30-4]
Length = 95
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 77/89 (86%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFK+LVGK+V VELKNDV++ G L SVDQYLNIKL ++SV + DK+P ++++KNCF
Sbjct: 1 LFYSFFKTLVGKEVAVELKNDVALMGVLDSVDQYLNIKLLNVSVVEGDKFPQLMNMKNCF 60
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
IRGS +RYVQ+P EVDT+LLQDA R+EA
Sbjct: 61 IRGSSIRYVQIPAGEVDTELLQDAARREA 89
>gi|301099937|ref|XP_002899059.1| 6 snRNA-associated Sm-like protein, putative [Phytophthora
infestans T30-4]
gi|262104371|gb|EEY62423.1| 6 snRNA-associated Sm-like protein, putative [Phytophthora
infestans T30-4]
Length = 134
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 77/90 (85%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+ FYSFFK+LVGK+V VELKNDV++ G L SVDQYLNIKL ++SV + DK+P ++++KNC
Sbjct: 39 MFFYSFFKTLVGKEVAVELKNDVALMGVLDSVDQYLNIKLLNVSVVEGDKFPQLMNMKNC 98
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGS +RYVQ+P EVDT+LLQDA R+EA
Sbjct: 99 FIRGSSIRYVQIPAGEVDTELLQDAARREA 128
>gi|281352260|gb|EFB27844.1| hypothetical protein PANDA_021869 [Ailuropoda melanoleuca]
Length = 72
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/69 (92%), Positives = 66/69 (95%)
Query: 27 SICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPGDEVDTQLLQ 86
SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCFIRGSVVRYVQLP DEVDTQLLQ
Sbjct: 1 SICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQ 60
Query: 87 DATRKEAVN 95
DA RKEA+
Sbjct: 61 DAARKEALQ 69
>gi|432089451|gb|ELK23393.1| Sialidase-1 [Myotis davidii]
Length = 771
Score = 137 bits (345), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/68 (92%), Positives = 66/68 (97%)
Query: 27 SICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPGDEVDTQLLQ 86
+ICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCFIRGSVVRYVQLP DEVDTQLLQ
Sbjct: 700 TICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQ 759
Query: 87 DATRKEAV 94
DA RKEA+
Sbjct: 760 DAARKEAL 767
>gi|331243742|ref|XP_003334513.1| U6 snRNA-associated Sm-like protein LSm2 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
gi|309313503|gb|EFP90094.1| U6 snRNA-associated Sm-like protein LSm2 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
Length = 96
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 79/95 (83%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L +S FK+L G++V +ELKND++I GTL SVDQ+LN+KL +I V D +++PHM++VKNC
Sbjct: 1 MLIFSVFKTLTGQEVTIELKNDLAIQGTLASVDQFLNLKLENIKVLDQERHPHMMAVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQ+P VDTQLL+DATRKEA N +
Sbjct: 61 FIRGSVVRYVQIPKAAVDTQLLEDATRKEAANTAK 95
>gi|281210502|gb|EFA84668.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 99
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 75/90 (83%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSF+K+LVGK++ VELKND+SI G L SVDQ+LNIKL D+ V + DKYP+MLSVKNC
Sbjct: 1 MLFYSFYKTLVGKEITVELKNDLSITGLLQSVDQFLNIKLKDVRVEEEDKYPYMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV LP EVD + LQD +R EA
Sbjct: 61 FIRGSVVRYVHLPASEVDVETLQDHSRLEA 90
>gi|145340671|ref|XP_001415444.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575667|gb|ABO93736.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 130
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/92 (70%), Positives = 74/92 (80%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYS+FK+LVGK V VELKND++I GTL SVDQYLNIKL + VTD +YPHM SV+NCF
Sbjct: 39 LFYSYFKTLVGKPVTVELKNDLAIAGTLVSVDQYLNIKLENTRVTDEARYPHMRSVRNCF 98
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
IRGSVVRYVQLP VD +L DATR+EA A
Sbjct: 99 IRGSVVRYVQLPEAAVDVDILHDATRREARGA 130
>gi|66812912|ref|XP_640635.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74855297|sp|Q54TF6.1|LSM2_DICDI RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm2
gi|60468648|gb|EAL66651.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 117
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 76/90 (84%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SF+KSLVGK++ VELKND+SI G L SVDQ+LNIKL DI V + DKYP+M+SVKNC
Sbjct: 1 MLFFSFYKSLVGKEITVELKNDLSITGLLQSVDQFLNIKLKDIKVNEEDKYPYMISVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV LP ++VD + LQD +R EA
Sbjct: 61 FIRGSVVRYVHLPAEDVDVETLQDHSRLEA 90
>gi|389739973|gb|EIM81165.1| U6 snRNA-associated Sm-like protein LSm2 [Stereum hirsutum
FP-91666 SS1]
Length = 96
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 77/95 (81%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L +S FK+L + V VELKND+SI GTL SVDQ+LNI+L I V DP ++PHM++VKNC
Sbjct: 1 MLIFSVFKTLTDQRVTVELKNDLSITGTLKSVDQFLNIRLDQIEVMDPARHPHMMAVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLP + VDTQLL+DATR+E+ N +
Sbjct: 61 FIRGSVVRYVQLPSEHVDTQLLEDATRRESANQAK 95
>gi|167523208|ref|XP_001745941.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775742|gb|EDQ89365.1| predicted protein [Monosiga brevicollis MX1]
Length = 96
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 76/95 (80%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF SFFK+L+GK+V VELKND+ + G L SVDQ+LNIKL I V D ++YPHM++VKNC
Sbjct: 1 MLFSSFFKTLIGKEVTVELKNDLQLNGVLKSVDQFLNIKLDSIQVADIERYPHMMAVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRY+ LP + VD QLLQDATRKEA +
Sbjct: 61 FIRGSVVRYIHLPPEHVDKQLLQDATRKEATGGDK 95
>gi|328771463|gb|EGF81503.1| hypothetical protein BATDEDRAFT_10632 [Batrachochytrium
dendrobatidis JAM81]
Length = 111
Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 77/89 (86%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFK+LVG++V++ELKND++I G L SVDQ+LN KL +I V D +++PHM+SVKNCF
Sbjct: 15 LFYSFFKTLVGQEVIIELKNDLAIVGKLVSVDQFLNFKLDNIRVEDEERFPHMMSVKNCF 74
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
IRGSVVRYV++P +VDT LLQDA RKEA
Sbjct: 75 IRGSVVRYVRIPASKVDTALLQDAARKEA 103
>gi|159464231|ref|XP_001690345.1| Sm-D1 protein [Chlamydomonas reinhardtii]
gi|158279845|gb|EDP05604.1| Sm-D1 protein [Chlamydomonas reinhardtii]
Length = 93
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 74/90 (82%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S FK+LVGK+V VELKND+ I G LHSVDQYLNIKLT+ V + KYPHM+SV+NC
Sbjct: 1 MLFFSLFKTLVGKEVTVELKNDLCISGALHSVDQYLNIKLTNTRVHNEQKYPHMMSVRNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV LP VD ++L DATR+EA
Sbjct: 61 FIRGSVVRYVHLPPGAVDVEVLHDATRREA 90
>gi|346324359|gb|EGX93956.1| small nuclear ribonucleoprotein LSM2 [Cordyceps militaris CM01]
Length = 98
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 75/90 (83%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ ++V VELKND+ + GTL SVDQYLNIKL DISV + KYPHM SVKN
Sbjct: 1 MLFFSFFKTLIDQEVTVELKNDIQLRGTLKSVDQYLNIKLDDISVIEELKYPHMSSVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV LP VDTQLL+DATR+EA
Sbjct: 61 FIRGSVVRYVHLPAASVDTQLLEDATRREA 90
>gi|440795747|gb|ELR16863.1| snRNP core protein SMX5d, putative [Acanthamoeba castellanii str.
Neff]
Length = 113
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 78/103 (75%), Gaps = 14/103 (13%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGK+VVVELKND++I G LHSVDQYLNIKL DI V D +KYPH+LSV+NCF
Sbjct: 3 LFYSFFKSLVGKEVVVELKNDLAIRGVLHSVDQYLNIKLHDIHVLDEEKYPHLLSVRNCF 62
Query: 65 IRGSVVRYVQLPGD--------------EVDTQLLQDATRKEA 93
IRGSV+RYVQ+P EV T+LLQD+ R EA
Sbjct: 63 IRGSVIRYVQIPAKAPSPSARCTATLFCEVVTELLQDSARIEA 105
>gi|290999355|ref|XP_002682245.1| predicted protein [Naegleria gruberi]
gi|284095872|gb|EFC49501.1| predicted protein [Naegleria gruberi]
Length = 95
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 77/89 (86%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV K+V+VELKNDVS+ GTLHSVDQYLN+KL ++ V D +KYP++ +KNC
Sbjct: 2 VLFFSFFKTLVDKEVIVELKNDVSLRGTLHSVDQYLNVKLNNVQVEDKEKYPYLCCIKNC 61
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGS VRY+QLP +VDT+ LQ+ATRKE
Sbjct: 62 FIRGSTVRYIQLPAADVDTEALQNATRKE 90
>gi|400602727|gb|EJP70329.1| DOM34-interacting protein [Beauveria bassiana ARSEF 2860]
Length = 98
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 75/90 (83%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ ++V VELKND+ + GTL SVDQYLNIKL DISV + KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLIEQEVTVELKNDIQLRGTLKSVDQYLNIKLDDISVMEELKYPHLSSVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV LP VDTQLL+DATR+EA
Sbjct: 61 FIRGSVVRYVHLPASSVDTQLLEDATRREA 90
>gi|330846289|ref|XP_003294973.1| hypothetical protein DICPUDRAFT_85411 [Dictyostelium purpureum]
gi|325074445|gb|EGC28500.1| hypothetical protein DICPUDRAFT_85411 [Dictyostelium purpureum]
Length = 114
Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 76/90 (84%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SF+K+LVGK++ VELKND+SI G L SVDQ+LNIKL DI V + +KYP+M+SVKNC
Sbjct: 1 MLFFSFYKTLVGKEITVELKNDLSITGLLQSVDQFLNIKLKDIKVNEEEKYPYMISVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV LP D+VD + LQD +R EA
Sbjct: 61 FIRGSVVRYVHLPADDVDVETLQDHSRLEA 90
>gi|440640678|gb|ELR10597.1| hypothetical protein GMDG_04869 [Geomyces destructans 20631-21]
Length = 100
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 75/89 (84%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I GTL SVDQYLNIKL DISV + KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDIQIRGTLKSVDQYLNIKLDDISVVEEIKYPHLSSVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGSVVRYV LPG VDTQLL+DATR+E
Sbjct: 61 FIRGSVVRYVHLPGAVVDTQLLEDATRRE 89
>gi|453089853|gb|EMF17893.1| U6 snRNA-associated Sm-like protein LSm2 [Mycosphaerella
populorum SO2202]
Length = 100
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 74/90 (82%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++ VELKND+SI GTL SVDQYLNIKL DISV + KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLVNHEITVELKNDISIRGTLKSVDQYLNIKLDDISVVEELKYPHLSSVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV LP VDT LL+DATR+EA
Sbjct: 61 FIRGSVVRYVHLPAAAVDTPLLEDATRREA 90
>gi|412993679|emb|CCO14190.1| small nuclear ribonucleoprotein LSM2 [Bathycoccus prasinos]
Length = 94
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 76/93 (81%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFK+LVGK + VELKND+ I GTL SVDQYLNIKL +SV D +KYPHM SV++C
Sbjct: 1 MLFYSFFKTLVGKQITVELKNDLEIRGTLVSVDQYLNIKLESVSVLDEEKYPHMKSVRDC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
F+RGSVVRYVQ P + VD +L DATR+EA +A
Sbjct: 61 FVRGSVVRYVQPPEESVDVDILHDATRREARSA 93
>gi|449297262|gb|EMC93280.1| hypothetical protein BAUCODRAFT_75741 [Baudoinia compniacensis UAMH
10762]
Length = 1058
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 63/90 (70%), Positives = 75/90 (83%)
Query: 2 ERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
+++LF+SFFK+LV ++V VELKND+SI GTL SVDQYLNIKL DISV + KYPH+ SVK
Sbjct: 924 DKMLFFSFFKTLVNQEVTVELKNDISIRGTLKSVDQYLNIKLDDISVVEEMKYPHLSSVK 983
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
N FIRGSVVRYV LP VDT LL+DATR+
Sbjct: 984 NVFIRGSVVRYVHLPAAAVDTPLLEDATRR 1013
>gi|452848080|gb|EME50012.1| hypothetical protein DOTSEDRAFT_68763 [Dothistroma septosporum
NZE10]
Length = 101
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/90 (71%), Positives = 74/90 (82%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV +V VELKND+SI GTL SVDQYLNIKL D+SV + KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLVNHEVTVELKNDISIRGTLKSVDQYLNIKLDDVSVVEELKYPHLSSVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV LP VDT LL+DATR+EA
Sbjct: 61 FIRGSVVRYVHLPAVAVDTPLLEDATRREA 90
>gi|328873860|gb|EGG22226.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 99
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 73/90 (81%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSF+K+LVGK++ VELKND++I G L SVDQ+LNIKL DI V + KYP+MLSVKNC
Sbjct: 1 MLFYSFYKTLVGKEITVELKNDLAITGYLQSVDQFLNIKLRDIRVEEEQKYPYMLSVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV LP D+VD LQD R EA
Sbjct: 61 FIRGSVVRYVHLPADDVDVDTLQDHARLEA 90
>gi|452987425|gb|EME87180.1| hypothetical protein MYCFIDRAFT_212793 [Pseudocercospora fijiensis
CIRAD86]
Length = 1055
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 64/89 (71%), Positives = 72/89 (80%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV +V VELKND+SI GTL SVDQYLNIKL DISV D YPH+ SVKN
Sbjct: 936 MLFFSFFKTLVNHEVTVELKNDISIRGTLKSVDQYLNIKLDDISVVDEMSYPHLSSVKNV 995
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGSVVRYV LP VDT LL+DATR+E
Sbjct: 996 FIRGSVVRYVHLPAAAVDTPLLEDATRRE 1024
>gi|398410479|ref|XP_003856589.1| hypothetical protein MYCGRDRAFT_78925 [Zymoseptoria tritici
IPO323]
gi|339476474|gb|EGP91565.1| hypothetical protein MYCGRDRAFT_78925 [Zymoseptoria tritici
IPO323]
Length = 100
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 74/90 (82%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV +V VELKND+SI GTL SVDQ+LNIKL +ISV D K+PH+ SVKN
Sbjct: 1 MLFFSFFKTLVNHEVTVELKNDISIRGTLKSVDQFLNIKLDNISVVDEVKFPHLSSVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV LP VDT LL+DATR+EA
Sbjct: 61 FIRGSVVRYVHLPAAAVDTPLLEDATRREA 90
>gi|392569319|gb|EIW62492.1| U6 snRNA-associated Sm-like protein LSm2 [Trametes versicolor
FP-101664 SS1]
Length = 96
Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 75/90 (83%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L +S FK+L + V VELKND+SI GTL SVDQ+LNI+L +I V D ++PHM++VKNC
Sbjct: 1 MLIFSVFKTLTDQRVTVELKNDLSITGTLKSVDQFLNIRLDNIKVLDEARHPHMMAVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP + VDTQLL+DATR+EA
Sbjct: 61 FIRGSVVRYVQLPAEHVDTQLLEDATRREA 90
>gi|407924656|gb|EKG17689.1| hypothetical protein MPH_05138 [Macrophomina phaseolina MS6]
Length = 100
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 74/89 (83%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV +V VELKND+SI GTL SVDQ+LNIKL DISV + KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLVDHEVTVELKNDISIRGTLKSVDQFLNIKLDDISVVEELKYPHLSSVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGSVVRYV LPG VDT LL+DATR+E
Sbjct: 61 FIRGSVVRYVHLPGAAVDTALLEDATRRE 89
>gi|403414133|emb|CCM00833.1| predicted protein [Fibroporia radiculosa]
Length = 634
Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 60/94 (63%), Positives = 76/94 (80%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
L +S FK+L + V VELKND+SI G L SVDQ+LNI+L I+V D ++PHM++VKNCF
Sbjct: 540 LIFSVFKTLTDQQVTVELKNDLSITGVLKSVDQFLNIRLDSITVLDEARHPHMMAVKNCF 599
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
IRGSVVRYVQLP + VDTQLL+DATR+EAV+ +
Sbjct: 600 IRGSVVRYVQLPAEHVDTQLLEDATRREAVSQAK 633
>gi|345569040|gb|EGX51909.1| hypothetical protein AOL_s00043g643 [Arthrobotrys oligospora ATCC
24927]
Length = 144
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 74/91 (81%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV +V +ELKND+SI GTL SVDQ+LNIKL +I V D KYPH+ +VKN
Sbjct: 47 MLFFSFFKTLVDHEVTIELKNDLSIRGTLKSVDQFLNIKLDEIQVVDEVKYPHLSAVKNV 106
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
FIRGSVVRYV LP + VDT LL+DATR+EA
Sbjct: 107 FIRGSVVRYVHLPANAVDTALLEDATRREAA 137
>gi|393217755|gb|EJD03244.1| U6 snRNA-associated Sm-like protein LSm2 [Fomitiporia
mediterranea MF3/22]
Length = 96
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 74/95 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L +S FK+L + V VELKND+SI G L SVDQ+LNI+L +I V D +PHM++VKNC
Sbjct: 1 MLIFSLFKTLTDQTVTVELKNDLSITGVLKSVDQFLNIRLDNIKVLDEANHPHMMAVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLP VDTQLL+DATR+EA N +
Sbjct: 61 FIRGSVVRYVQLPAQHVDTQLLEDATRREAANQVK 95
>gi|402223919|gb|EJU03982.1| U6 snRNA-associated Sm-like protein LSm2 [Dacryopinax sp. DJM-731
SS1]
Length = 96
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 74/89 (83%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L +S FK+L + V VELKND+ I GTL SVDQ+LNI+L ISV DP+K+PHM++VKNC
Sbjct: 1 MLIFSVFKTLTDQIVTVELKNDLCITGTLKSVDQFLNIRLDKISVVDPEKHPHMMAVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGSVVRYVQ+P VDTQLL+DATR+E
Sbjct: 61 FIRGSVVRYVQIPATAVDTQLLEDATRRE 89
>gi|296805700|ref|XP_002843674.1| small nuclear ribonucleoprotein LSM2 [Arthroderma otae CBS
113480]
gi|238844976|gb|EEQ34638.1| small nuclear ribonucleoprotein LSM2 [Arthroderma otae CBS
113480]
Length = 98
Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 74/92 (80%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L + V +ELKND+ I GTL SVDQYLNIKL DI V D ++YPH+ SV+N
Sbjct: 1 MLFFSFFKTLTNRTVTIELKNDIRIRGTLKSVDQYLNIKLDDIEVLDLNEYPHLSSVRNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRY+ LP EVDT LL+DATR+EA N
Sbjct: 61 FIRGSVVRYIVLPQSEVDTGLLEDATRREAAN 92
>gi|134109889|ref|XP_776494.1| hypothetical protein CNBC5480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259170|gb|EAL21847.1| hypothetical protein CNBC5480 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 95
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 76/90 (84%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L +SFFK+L + + VELKND+SI GTL SVDQ+LNI+L +ISV DP+++PHM++VKNC
Sbjct: 1 MLIFSFFKTLTDQVITVELKNDLSITGTLKSVDQFLNIRLDNISVEDPERHPHMMAVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV++ VDT LL+DATR+EA
Sbjct: 61 FIRGSVVRYVRMAARSVDTTLLEDATRREA 90
>gi|154308998|ref|XP_001553834.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 157
Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 73/93 (78%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
++LF+SFFK+LV +V VELKND+ I G L SVDQYLNIKL DI V + KYPH+ SVKN
Sbjct: 59 KMLFFSFFKTLVDHEVTVELKNDIQIKGILKSVDQYLNIKLDDIQVVEELKYPHLSSVKN 118
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYV LPG +DT LL+DATR+EA
Sbjct: 119 VFIRGSVVRYVHLPGGVIDTALLEDATRREAAQ 151
>gi|328849372|gb|EGF98554.1| hypothetical protein MELLADRAFT_113458 [Melampsora larici-populina
98AG31]
Length = 161
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 74/87 (85%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
F + FK+L G++V +ELKND++I GTL SVDQ+LN+KL +I V D ++YPHM++VKNCF
Sbjct: 20 FFQNVFKTLTGQEVTIELKNDLAIQGTLASVDQFLNLKLENIKVLDQERYPHMMAVKNCF 79
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRK 91
IRGSVVRYVQ+P + VDTQLL+DATRK
Sbjct: 80 IRGSVVRYVQIPKNAVDTQLLEDATRK 106
>gi|47218886|emb|CAG05652.1| unnamed protein product [Tetraodon nigroviridis]
Length = 135
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/66 (92%), Positives = 65/66 (98%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHMLSV++C
Sbjct: 2 LFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVRDCI 61
Query: 65 IRGSVV 70
IRGSVV
Sbjct: 62 IRGSVV 67
>gi|315046638|ref|XP_003172694.1| small nuclear ribonucleoprotein LSM2 [Arthroderma gypseum CBS
118893]
gi|311343080|gb|EFR02283.1| small nuclear ribonucleoprotein LSM2 [Arthroderma gypseum CBS
118893]
Length = 98
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 73/92 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L + V +ELKND+ I GTL SVDQYLNIKL DI V D ++YPH+ SV N
Sbjct: 1 MLFFSFFKTLTNRTVTIELKNDIRIRGTLKSVDQYLNIKLDDIEVLDLNEYPHLSSVSNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRY+ LP EVDT LL+DATR+EA N
Sbjct: 61 FIRGSVVRYIVLPQSEVDTGLLEDATRREAAN 92
>gi|388582559|gb|EIM22863.1| U6 snRNA-associated Sm-like protein LSm2 [Wallemia sebi CBS
633.66]
Length = 93
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 74/90 (82%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S FK+L + V VELKND+ + GTL SVDQ+LNIKL ++ V D +YPHM+++KN
Sbjct: 1 MLFFSVFKTLTEQTVTVELKNDLCLIGTLKSVDQFLNIKLDNVKVLDEQRYPHMMAIKNT 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYVQLP + +DTQLLQDATR+EA
Sbjct: 61 FIRGSVVRYVQLPSESIDTQLLQDATRREA 90
>gi|358057850|dbj|GAA96352.1| hypothetical protein E5Q_03018 [Mixia osmundae IAM 14324]
Length = 96
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 79/95 (83%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L YS FK+L + V VELKND++I GTL SVDQ+LNIKL +ISV DP+++PHM++V+NC
Sbjct: 1 MLIYSVFKTLTEQVVTVELKNDLAIRGTLKSVDQFLNIKLDNISVLDPERHPHMMTVRNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
F+RGSV+RYV +P + ++T LL+DATR+EA N ++
Sbjct: 61 FVRGSVIRYVHIPKNAIETPLLEDATRREAANNSK 95
>gi|327305527|ref|XP_003237455.1| small nuclear ribonucleoprotein LSM2 [Trichophyton rubrum CBS
118892]
gi|326460453|gb|EGD85906.1| small nuclear ribonucleoprotein LSM2 [Trichophyton rubrum CBS
118892]
gi|326476056|gb|EGE00066.1| small nuclear ribonucleoprotein LSM2 [Trichophyton tonsurans CBS
112818]
gi|326484026|gb|EGE08036.1| small nuclear ribonucleoprotein LSM2 [Trichophyton equinum CBS
127.97]
Length = 98
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 73/92 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L + V +ELKND+ I GTL SVDQYLN+KL DI V D ++YPH+ SV N
Sbjct: 1 MLFFSFFKTLTNRTVTIELKNDIRIRGTLKSVDQYLNVKLDDIEVLDLNEYPHLSSVSNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRY+ LP EVDT LL+DATR+EA N
Sbjct: 61 FIRGSVVRYIVLPQSEVDTGLLEDATRREAAN 92
>gi|303273532|ref|XP_003056127.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462211|gb|EEH59503.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 92
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 73/92 (79%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
LFYS+FK+L+GK V VELKND++I G L SVDQYLNIKL + V D +YPHM SV++CF
Sbjct: 1 LFYSYFKTLMGKQVTVELKNDLAITGLLRSVDQYLNIKLQETVVVDEARYPHMSSVRSCF 60
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
IRGSVVRYVQLP D VD +L DATR++A A
Sbjct: 61 IRGSVVRYVQLPPDAVDVDILHDATRRDARGA 92
>gi|295672151|ref|XP_002796622.1| small nuclear ribonucleoprotein LSM2 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226283602|gb|EEH39168.1| small nuclear ribonucleoprotein LSM2 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226288343|gb|EEH43855.1| small nuclear ribonucleoprotein LSM2 [Paracoccidioides
brasiliensis Pb18]
Length = 98
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 72/92 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L V +ELKND+ I GTL SVDQYLNIKL DI V D D+YPH+ SVKN
Sbjct: 1 MLFFSFFKTLTNHTVTIELKNDIRIRGTLKSVDQYLNIKLDDIEVLDLDQYPHLSSVKNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
F+RGSVVRYV LP EVD LL+DATR+EA N
Sbjct: 61 FVRGSVVRYVVLPQAEVDRGLLEDATRREAAN 92
>gi|336371214|gb|EGN99553.1| hypothetical protein SERLA73DRAFT_179636 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383976|gb|EGO25124.1| hypothetical protein SERLADRAFT_464832 [Serpula lacrymans var.
lacrymans S7.9]
Length = 96
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 74/95 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L +S FK+L + V VELKND+ I G L SVDQ+LNI+L I V D ++PHM+++KNC
Sbjct: 1 MLIFSVFKTLTDQRVTVELKNDLCITGVLKSVDQFLNIRLDAIKVLDEARHPHMMAIKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYVQLP + VDTQLL+DATR+EA N +
Sbjct: 61 FIRGSVVRYVQLPAEHVDTQLLEDATRREAANQAK 95
>gi|302414568|ref|XP_003005116.1| DOM34-interacting protein [Verticillium albo-atrum VaMs.102]
gi|261356185|gb|EEY18613.1| DOM34-interacting protein [Verticillium albo-atrum VaMs.102]
Length = 977
Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 74/92 (80%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
++++LF+SFFK+L+ +V +ELKND+ I GTL SVDQYLNIKL DISV + KYPH+ SV
Sbjct: 877 LDKMLFFSFFKTLIDHEVTIELKNDIQIRGTLKSVDQYLNIKLEDISVVEELKYPHLSSV 936
Query: 61 KNCFIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
KN FIRGSVVRYV LP VD LL+DATR+E
Sbjct: 937 KNVFIRGSVVRYVHLPAASVDVPLLEDATRRE 968
>gi|408400661|gb|EKJ79738.1| hypothetical protein FPSE_00018 [Fusarium pseudograminearum
CS3096]
Length = 98
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 72/89 (80%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ +V VELKND+ + G L SVDQYLNIKL DI V + KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLIDHEVTVELKNDIQLKGILKSVDQYLNIKLDDIQVVEELKYPHLSSVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGSVVRYV LPG VDTQLL+DATR+E
Sbjct: 61 FIRGSVVRYVHLPGASVDTQLLEDATRRE 89
>gi|261203087|ref|XP_002628757.1| small nuclear ribonucleoprotein LSM2 [Ajellomyces dermatitidis
SLH14081]
gi|239586542|gb|EEQ69185.1| small nuclear ribonucleoprotein LSM2 [Ajellomyces dermatitidis
SLH14081]
gi|327349625|gb|EGE78482.1| small nuclear ribonucleoprotein LSM2 [Ajellomyces dermatitidis
ATCC 18188]
Length = 98
Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 72/92 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L V +ELKND+ I GTL SVDQYLNIKL DI V D D+YPH+ SVKN
Sbjct: 1 MLFFSFFKTLTNHTVTIELKNDIRIRGTLKSVDQYLNIKLDDIEVLDLDQYPHLSSVKNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
F+RGSVVRY+ LP EVD LL+DATR+EA N
Sbjct: 61 FVRGSVVRYIVLPQAEVDRGLLEDATRREAAN 92
>gi|346979373|gb|EGY22825.1| DOM34-interacting protein [Verticillium dahliae VdLs.17]
Length = 1081
Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 73/91 (80%)
Query: 2 ERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
+++LF+SFFK+L+ +V +ELKND+ I GTL SVDQYLNIKL DISV + KYPH+ SVK
Sbjct: 982 DKMLFFSFFKTLIDHEVTIELKNDIQIRGTLKSVDQYLNIKLEDISVVEELKYPHLSSVK 1041
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
N FIRGSVVRYV LP VD LL+DATR+E
Sbjct: 1042 NVFIRGSVVRYVHLPAASVDVPLLEDATRRE 1072
>gi|322708983|gb|EFZ00560.1| small nuclear ribonucleoprotein LSM2 [Metarhizium anisopliae ARSEF
23]
Length = 108
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 70/87 (80%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
SFFK+L+ +V VELKND+ + GTL SVDQYLNIKL DISV + KYPH+ SVKN FIRG
Sbjct: 15 SFFKTLIDHEVTVELKNDIQLKGTLKSVDQYLNIKLDDISVVEELKYPHLSSVKNVFIRG 74
Query: 68 SVVRYVQLPGDEVDTQLLQDATRKEAV 94
SVVRYV LP VDTQLL+DATR+EA
Sbjct: 75 SVVRYVHLPAGSVDTQLLEDATRREAA 101
>gi|303311569|ref|XP_003065796.1| U6 snRNA-associated Sm-like protein LSm2 , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240105458|gb|EER23651.1| U6 snRNA-associated Sm-like protein LSm2 , putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 98
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 72/92 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L V++ELKND+ I G L SVDQYLNIKL DI V D DKYPH+ SVKN
Sbjct: 1 MLFFSFFKTLTNHTVIIELKNDIRIRGILKSVDQYLNIKLDDIEVIDLDKYPHLSSVKNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRY+ LP + VD LL+DATR+EA +
Sbjct: 61 FIRGSVVRYIVLPQEAVDRALLEDATRREAAS 92
>gi|336464042|gb|EGO52282.1| hypothetical protein NEUTE1DRAFT_118711 [Neurospora tetrasperma
FGSC 2508]
gi|380096066|emb|CCC06113.1| small nuclear ribonucleoprotein LSM2 [Sordaria macrospora k-hell]
Length = 100
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 73/92 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ +V VELKND+ I G L SVDQ+LNIKL +I V + KYPH+ +VKN
Sbjct: 1 MLFFSFFKTLIDHEVTVELKNDIQIRGVLKSVDQFLNIKLDNIQVVEELKYPHLSAVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYV LP + VD QLL+DATR+EA N
Sbjct: 61 FIRGSVVRYVHLPQESVDIQLLEDATRREAAN 92
>gi|116192515|ref|XP_001222070.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181888|gb|EAQ89356.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 98
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 72/92 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ +V VELKND+ I G L SVDQYLNIKL +I V + KYPHM +VKN
Sbjct: 1 MLFFSFFKTLIDHEVTVELKNDIQIRGVLKSVDQYLNIKLDNIQVLEEIKYPHMSAVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYV LP + VD LL+DATR+EA N
Sbjct: 61 FIRGSVVRYVHLPANAVDVPLLEDATRREAAN 92
>gi|358391574|gb|EHK40978.1| hypothetical protein TRIATDRAFT_135662 [Trichoderma atroviride
IMI 206040]
Length = 98
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 71/89 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ +V VELKND+ + G L SVDQYLNIKL DI V + KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLIDHEVTVELKNDIQLKGMLKSVDQYLNIKLDDIQVVEELKYPHLSSVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGSVVRYV LP VDTQLL+DATR+E
Sbjct: 61 FIRGSVVRYVHLPAASVDTQLLEDATRRE 89
>gi|340520773|gb|EGR51009.1| predicted protein [Trichoderma reesei QM6a]
gi|358378070|gb|EHK15753.1| hypothetical protein TRIVIDRAFT_214945 [Trichoderma virens
Gv29-8]
Length = 98
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 71/89 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ +V VELKND+ + G L SVDQYLNIKL DI V + KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLIDHEVTVELKNDIQLKGILKSVDQYLNIKLDDIQVVEELKYPHLSSVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGSVVRYV LP VDTQLL+DATR+E
Sbjct: 61 FIRGSVVRYVHLPAASVDTQLLEDATRRE 89
>gi|320039679|gb|EFW21613.1| LSM domain-containing protein [Coccidioides posadasii str.
Silveira]
Length = 98
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 72/92 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L V++ELKND+ I G L SVDQYLNIKL DI V D DKYPH+ SVKN
Sbjct: 1 MLFFSFFKTLTNHTVIIELKNDIRIRGILKSVDQYLNIKLDDIEVIDLDKYPHLSSVKNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRY+ LP + VD LL+DATR+EA +
Sbjct: 61 FIRGSVVRYIVLPQEAVDRGLLEDATRREAAS 92
>gi|219113311|ref|XP_002186239.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583089|gb|ACI65709.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 98
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 73/92 (79%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
+F SFFK+LVGK+V VELKNDV + GTLHSVDQYLNIKL + V P++YP ++++K+ F
Sbjct: 2 IFLSFFKTLVGKEVAVELKNDVVLTGTLHSVDQYLNIKLIHVQVVQPERYPQLVALKSVF 61
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
+RGSVVRY+Q+ VDT+LLQDA RKE A
Sbjct: 62 VRGSVVRYIQIDPQHVDTELLQDAARKENAPA 93
>gi|406866049|gb|EKD19089.1| small nuclear ribonucleoprotein LSM2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 104
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 70/87 (80%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
FFK+LV +V VELKND+ I GTL SVDQYLNIKL +ISV + KYPH+ SVKN FIRGS
Sbjct: 11 FFKTLVDHEVTVELKNDIQIRGTLKSVDQYLNIKLDNISVVEDLKYPHLSSVKNVFIRGS 70
Query: 69 VVRYVQLPGDEVDTQLLQDATRKEAVN 95
VVRYV LPG VDT LL+DATR+EA N
Sbjct: 71 VVRYVHLPGSAVDTALLEDATRREAAN 97
>gi|302679514|ref|XP_003029439.1| hypothetical protein SCHCODRAFT_58515 [Schizophyllum commune
H4-8]
gi|300103129|gb|EFI94536.1| hypothetical protein SCHCODRAFT_58515, partial [Schizophyllum
commune H4-8]
Length = 99
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 72/89 (80%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
L +S FK+L + V VELKND+SI G L SVDQ+LNI+L DI V D ++PHM++VKNCF
Sbjct: 1 LIFSVFKTLTDQQVTVELKNDLSITGVLKSVDQFLNIRLDDIKVLDEARHPHMMAVKNCF 60
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
IRGSVVRYVQLP + VDTQLL+DATR+ A
Sbjct: 61 IRGSVVRYVQLPTEHVDTQLLEDATRRGA 89
>gi|171684599|ref|XP_001907241.1| hypothetical protein [Podospora anserina S mat+]
gi|170942260|emb|CAP67912.1| unnamed protein product [Podospora anserina S mat+]
Length = 98
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 71/92 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ +V VELKND+ I G L SVDQYLNIKL +I V D KYPH+ +VKN
Sbjct: 1 MLFFSFFKTLIDHEVTVELKNDIRIRGVLKSVDQYLNIKLDNIQVVDELKYPHLSAVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYV LP VD LL+DATR+EA N
Sbjct: 61 FIRGSVVRYVHLPSQSVDIDLLEDATRREAAN 92
>gi|367020836|ref|XP_003659703.1| hypothetical protein MYCTH_2137175 [Myceliophthora thermophila
ATCC 42464]
gi|347006970|gb|AEO54458.1| hypothetical protein MYCTH_2137175 [Myceliophthora thermophila
ATCC 42464]
Length = 98
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 71/92 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ +V VELKND+ I G L SVDQYLNIKL +I V + KYPHM +VKN
Sbjct: 1 MLFFSFFKTLIDHEVTVELKNDIQIRGVLKSVDQYLNIKLDNIQVLEEIKYPHMSAVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYV LP VD LL+DATR+EA N
Sbjct: 61 FIRGSVVRYVHLPASAVDVPLLEDATRREAAN 92
>gi|225554412|gb|EEH02710.1| small nuclear ribonucleoprotein LSM2 [Ajellomyces capsulatus
G186AR]
gi|240273447|gb|EER36967.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
Length = 98
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 72/92 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK++ V +ELKND+ I GTL SVDQYLNIKL DI V D D+YPH+ SVKN
Sbjct: 1 MLFFSFFKTITNHTVTIELKNDIRIRGTLKSVDQYLNIKLDDIEVLDLDEYPHLSSVKNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
F+RGSVVRY+ LP EVD LL+DATR+EA N
Sbjct: 61 FVRGSVVRYIVLPQAEVDRGLLEDATRREAEN 92
>gi|124506327|ref|XP_001351761.1| U6 snRNA-associated sm-like protein Lsm2, putative [Plasmodium
falciparum 3D7]
gi|23504690|emb|CAD51568.1| U6 snRNA-associated sm-like protein Lsm2, putative [Plasmodium
falciparum 3D7]
Length = 103
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 74/92 (80%), Gaps = 2/92 (2%)
Query: 4 LLFYSFFKSLVGKD--VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
+LF++FF+ L K+ V VELKND+ I G LHSVDQYLNIKLT++SV +P+KYPH+LS+K
Sbjct: 1 MLFFTFFQQLAEKNHHVTVELKNDLQISGVLHSVDQYLNIKLTNVSVNNPEKYPHLLSIK 60
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
+CF+RGSVVRYV LP +E+D Q L R+EA
Sbjct: 61 SCFVRGSVVRYVFLPSNEIDVQKLHHMCRQEA 92
>gi|154271292|ref|XP_001536499.1| small nuclear ribonucleoprotein LSM2 [Ajellomyces capsulatus
NAm1]
gi|150409169|gb|EDN04619.1| small nuclear ribonucleoprotein LSM2 [Ajellomyces capsulatus
NAm1]
Length = 98
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 72/92 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK++ V +ELKND+ I GTL SVDQYLNIKL DI V D D+YPH+ SVKN
Sbjct: 1 MLFFSFFKTITNHTVTIELKNDIRIRGTLKSVDQYLNIKLDDIEVLDLDEYPHLSSVKNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
F+RGSVVRY+ LP EVD LL+DATR+EA N
Sbjct: 61 FVRGSVVRYIVLPQAEVDRGLLEDATRREAEN 92
>gi|367042876|ref|XP_003651818.1| hypothetical protein THITE_2112526 [Thielavia terrestris NRRL
8126]
gi|346999080|gb|AEO65482.1| hypothetical protein THITE_2112526 [Thielavia terrestris NRRL
8126]
Length = 98
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 71/92 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ +V VELKND+ I G L SVDQYLNIKL +I V + KYPHM +VKN
Sbjct: 1 MLFFSFFKTLIDHEVTVELKNDIQIRGVLKSVDQYLNIKLDNIQVMEELKYPHMSAVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYV LP VD LL+DATR+EA N
Sbjct: 61 FIRGSVVRYVHLPAAAVDIPLLEDATRREAAN 92
>gi|395328022|gb|EJF60417.1| U6 snRNA-associated Sm-like protein LSm2, partial [Dichomitus
squalens LYAD-421 SS1]
Length = 89
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 72/87 (82%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
L +S FK+L + V VELKND+SI GTL SVDQ+LNI+L +I V D ++PHM++VKNCF
Sbjct: 1 LIFSVFKTLTDQRVTVELKNDLSITGTLKSVDQFLNIRLDNIKVLDEARHPHMMAVKNCF 60
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRK 91
IRGSVVRYVQLP + VDTQLL+DATR+
Sbjct: 61 IRGSVVRYVQLPAEHVDTQLLEDATRR 87
>gi|378733177|gb|EHY59636.1| U6 snRNA-associated Sm-like protein LSm2 [Exophiala dermatitidis
NIH/UT8656]
Length = 98
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 73/91 (80%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L + V VELKND+SI GTL SVDQYLNIKL DI V D KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLTQQTVTVELKNDISIRGTLKSVDQYLNIKLDDIVVLDELKYPHLSSVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
FIRGSVVRYV LP D+VD LL+DA R+EA+
Sbjct: 61 FIRGSVVRYVHLPPDKVDRGLLEDACRREAM 91
>gi|119194065|ref|XP_001247636.1| hypothetical protein CIMG_01407 [Coccidioides immitis RS]
gi|392863119|gb|EAS36171.2| small nuclear ribonucleoprotein LSM2 [Coccidioides immitis RS]
Length = 178
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 72/92 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L V++ELKND+ I G L SVDQYLNIKL DI V D DKYPH+ SVKN
Sbjct: 81 MLFFSFFKTLTNHTVIIELKNDIRIRGILKSVDQYLNIKLDDIEVIDLDKYPHLSSVKNI 140
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRY+ LP + VD LL+DATR+EA +
Sbjct: 141 FIRGSVVRYIVLPQEAVDRGLLEDATRREAAS 172
>gi|343424875|emb|CBQ68413.1| related to LSM2-Sm-like (Lsm) protein [Sporisorium reilianum
SRZ2]
Length = 96
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L +S FK+L G+ V +ELKND++I GTL SVDQ+LN K+ +I V D K+PHM++VK+
Sbjct: 1 MLIFSAFKTLTGQQVTIELKNDLAIQGTLKSVDQFLNFKIDNIRVLDEAKHPHMMAVKSA 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYV +P VDTQLL+DATR+EA + T+
Sbjct: 61 FIRGSVVRYVHIPAAAVDTQLLEDATRREAASQTK 95
>gi|170097796|ref|XP_001880117.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644555|gb|EDR08804.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 100
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 72/87 (82%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
L +S FK+L + V VELKND+SI G L SVDQ+LNI+L +I V+D ++PHM++VKNCF
Sbjct: 1 LIFSVFKTLTDQQVTVELKNDLSITGVLKSVDQFLNIRLDNIKVSDESRHPHMMAVKNCF 60
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRK 91
IRGSVVRYVQLP + VDTQLL+DATR+
Sbjct: 61 IRGSVVRYVQLPAEHVDTQLLEDATRR 87
>gi|428172897|gb|EKX41803.1| hypothetical protein GUITHDRAFT_141784 [Guillardia theta CCMP2712]
Length = 107
Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 81/107 (75%), Gaps = 12/107 (11%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHML----- 58
+LFYS FK L+GK++VVELKND+++ GTLHSVDQYLN KL D+ V D +++PHM+
Sbjct: 1 MLFYSVFKRLIGKEIVVELKNDLALKGTLHSVDQYLNFKLLDVQVIDEERFPHMVRSSSS 60
Query: 59 -----SVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAV--NATR 98
SVKNCFIRGSVVRYVQ+P E+D ++LQD+TR E +A+R
Sbjct: 61 RARKASVKNCFIRGSVVRYVQIPPGELDPEVLQDSTRTEVAKEHASR 107
>gi|392593575|gb|EIW82900.1| U6 snRNA-associated Sm-like protein LSm2 [Coniophora puteana
RWD-64-598 SS2]
Length = 92
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 72/88 (81%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L +S FK+L + V VELKND+SI G L SVDQ+LNI+L I+V D ++PHM++VKNC
Sbjct: 1 MLIFSVFKTLTDQQVTVELKNDLSITGVLKSVDQFLNIRLDSITVLDEARHPHMMAVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
FIRGSVVRYVQLP + VDTQLL+DATR+
Sbjct: 61 FIRGSVVRYVQLPAEHVDTQLLEDATRR 88
>gi|449541112|gb|EMD32098.1| hypothetical protein CERSUDRAFT_119079 [Ceriporiopsis
subvermispora B]
Length = 130
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 72/93 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L +S FK+L + V VELKND+SI G L SVDQ+LNI+L I V D ++PHM++VKNC
Sbjct: 1 MLIFSVFKTLTDQQVTVELKNDLSITGVLKSVDQFLNIRLDSIKVLDEARHPHMMAVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
FIRGSVVRYVQLP + VDTQLL+DATR+ A
Sbjct: 61 FIRGSVVRYVQLPAEHVDTQLLEDATRRGRCTA 93
>gi|390602179|gb|EIN11572.1| U6 snRNA-associated Sm-like protein LSm2, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 114
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 72/89 (80%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
L +S FK+L + V VELKND+ I GTL SVDQ+LNI+L ISV D ++PHM++VKNCF
Sbjct: 1 LIFSVFKTLTDQRVTVELKNDLCITGTLKSVDQFLNIRLDGISVLDEARHPHMMAVKNCF 60
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
IRGSVVRYVQLP + VDTQLL+DATR+ A
Sbjct: 61 IRGSVVRYVQLPAEHVDTQLLEDATRRGA 89
>gi|342874372|gb|EGU76386.1| hypothetical protein FOXB_13064 [Fusarium oxysporum Fo5176]
Length = 120
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 69/86 (80%)
Query: 7 YSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIR 66
YSFFK+L+ +V VELKND+ + G L SVDQYLNIKL DI V + KYPH+ SVKN FIR
Sbjct: 26 YSFFKTLIDHEVTVELKNDIQLKGILKSVDQYLNIKLDDIQVVEELKYPHLSSVKNVFIR 85
Query: 67 GSVVRYVQLPGDEVDTQLLQDATRKE 92
GSVVRYV LPG VDTQLL+DATR+E
Sbjct: 86 GSVVRYVHLPGASVDTQLLEDATRRE 111
>gi|426197631|gb|EKV47558.1| hypothetical protein AGABI2DRAFT_68745 [Agaricus bisporus var.
bisporus H97]
Length = 101
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 73/87 (83%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
L +S FK+L + V VELKND+SI G L SVDQ+LNI+L +I V+D +++PHM++VKNCF
Sbjct: 3 LIFSVFKTLTDQTVTVELKNDLSITGVLKSVDQFLNIRLDNIKVSDENRHPHMMAVKNCF 62
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRK 91
IRGSVVRYVQLP + VDTQLL+DATR+
Sbjct: 63 IRGSVVRYVQLPAEHVDTQLLEDATRR 89
>gi|409080718|gb|EKM81078.1| hypothetical protein AGABI1DRAFT_36837 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 101
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 73/87 (83%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
L +S FK+L + V VELKND+SI G L SVDQ+LNI+L +I V+D +++PHM++VKNCF
Sbjct: 3 LIFSVFKTLTDQTVTVELKNDLSITGVLKSVDQFLNIRLDNIKVSDENRHPHMMAVKNCF 62
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRK 91
IRGSVVRYVQLP + VDTQLL+DATR+
Sbjct: 63 IRGSVVRYVQLPAEHVDTQLLEDATRR 89
>gi|6319445|ref|NP_009527.1| Lsm2p [Saccharomyces cerevisiae S288c]
gi|586410|sp|P38203.1|LSM2_YEAST RecName: Full=U6 snRNA-associated Sm-like protein LSm2; AltName:
Full=Small nuclear ribonucleoprotein D homolog SNP3
gi|536027|emb|CAA84845.1| SNP3 [Saccharomyces cerevisiae]
gi|602898|emb|CAA54505.1| YBL0425 [Saccharomyces cerevisiae]
gi|151946369|gb|EDN64591.1| snRNA-associated protein, Sm class [Saccharomyces cerevisiae
YJM789]
gi|190408851|gb|EDV12116.1| snRNA-associated protein [Saccharomyces cerevisiae RM11-1a]
gi|259144820|emb|CAY77759.1| Lsm2p [Saccharomyces cerevisiae EC1118]
gi|285810309|tpg|DAA07094.1| TPA: Lsm2p [Saccharomyces cerevisiae S288c]
gi|392301193|gb|EIW12282.1| Lsm2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 95
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 74/91 (81%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++VVVELKND+ I GTL SVDQ+LN+KL +IS TD KYPH+ SV+N
Sbjct: 1 MLFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLGSVRNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
FIRGS VRYV L + VDT LLQDATR+E +
Sbjct: 61 FIRGSTVRYVYLNKNMVDTNLLQDATRREVM 91
>gi|339234819|ref|XP_003378964.1| putative U3 small nucleolar RNA-associated protein 15-like protein
[Trichinella spiralis]
gi|316978437|gb|EFV61424.1| putative U3 small nucleolar RNA-associated protein 15-like protein
[Trichinella spiralis]
Length = 381
Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 64/72 (88%)
Query: 21 ELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPGDEV 80
E K ++ I G LHSVDQYLN+KL D+S++DP+KYPH++SVKNCFIRGSVVRYV LP DEV
Sbjct: 304 ESKMEIDITGNLHSVDQYLNLKLNDVSISDPEKYPHLVSVKNCFIRGSVVRYVHLPADEV 363
Query: 81 DTQLLQDATRKE 92
DTQLLQDATRKE
Sbjct: 364 DTQLLQDATRKE 375
>gi|349576355|dbj|GAA21526.1| K7_Lsm2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 95
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 74/91 (81%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++VVVELKND+ I GTL SVDQ+LN+KL +IS TD KYPH+ SV+N
Sbjct: 1 MLFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLGSVRNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
F+RGS VRYV L + VDT LLQDATR+E +
Sbjct: 61 FVRGSTVRYVYLNKNMVDTNLLQDATRREVM 91
>gi|255930807|ref|XP_002556960.1| Pc12g00570 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581579|emb|CAP79684.1| Pc12g00570 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 99
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L + V +ELKND+ I G L SVDQYLNIKL DI V D KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLTNQTVTIELKNDIRIRGILKSVDQYLNIKLDDIEVLDLAKYPHLSSVKNM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK-EAVN 95
FIRGSVVRYV LP EVD LL+DATR+ EA N
Sbjct: 61 FIRGSVVRYVMLPRSEVDVGLLEDATRRAEAAN 93
>gi|444316980|ref|XP_004179147.1| hypothetical protein TBLA_0B08120 [Tetrapisispora blattae CBS
6284]
gi|387512187|emb|CCH59628.1| hypothetical protein TBLA_0B08120 [Tetrapisispora blattae CBS
6284]
Length = 95
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 75/95 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ + GTL SVDQ+LN+KL +IS D DKYPH+ SV+N
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDIELKGTLKSVDQFLNLKLDNISCNDTDKYPHLSSVRNM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGS VRYV L + VDT LLQDA R+EA++ +
Sbjct: 61 FIRGSTVRYVYLQKNMVDTNLLQDAARREAMSEKK 95
>gi|341038669|gb|EGS23661.1| hypothetical protein CTHT_0003570 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 98
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 71/92 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ +V VELKND+ + G L SVDQYLNIKL ++ V + KYPH+ +VKN
Sbjct: 1 MLFFSFFKTLIDHEVTVELKNDIQLRGILKSVDQYLNIKLDNVQVMEELKYPHLSAVKNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYV LP VD QLL+DA R+EA N
Sbjct: 61 FIRGSVVRYVHLPASAVDVQLLEDAARREAQN 92
>gi|403215454|emb|CCK69953.1| hypothetical protein KNAG_0D02020 [Kazachstania naganishii CBS
8797]
Length = 95
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 76/95 (80%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++VVVELKND+ I GTL SVDQ+LN+KL +IS D KYPH+ +V+N
Sbjct: 1 MLFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCDDETKYPHLSTVRNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGS VRYV L + VDT LLQDATR+EA++ +
Sbjct: 61 FIRGSTVRYVYLNKNMVDTNLLQDATRREAMSEKK 95
>gi|365981885|ref|XP_003667776.1| hypothetical protein NDAI_0A03760 [Naumovozyma dairenensis CBS
421]
gi|343766542|emb|CCD22533.1| hypothetical protein NDAI_0A03760 [Naumovozyma dairenensis CBS
421]
Length = 95
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 77/95 (81%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++VVV+LKND+ + GTL SVDQ+LN+KL +IS TD KYPH+ SV+N
Sbjct: 1 MLFFSFFKTLVDQEVVVQLKNDIELKGTLQSVDQFLNLKLDNISCTDTKKYPHLGSVRNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGS VRYV L + VDT LLQDATR+EA++ +
Sbjct: 61 FIRGSTVRYVYLNKNIVDTNLLQDATRREAMSERK 95
>gi|366990261|ref|XP_003674898.1| hypothetical protein NCAS_0B04420 [Naumovozyma castellii CBS
4309]
gi|342300762|emb|CCC68526.1| hypothetical protein NCAS_0B04420 [Naumovozyma castellii CBS
4309]
Length = 95
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 77/95 (81%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++VVV+LKND+ + GTL SVDQ+LN+KL +IS TD KYPH+ SV+N
Sbjct: 1 MLFFSFFKTLVDQEVVVQLKNDIELKGTLQSVDQFLNLKLDNISCTDETKYPHLGSVRNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGS VRYV L + VDT LLQDATR+EA++ +
Sbjct: 61 FIRGSTVRYVYLNKNIVDTNLLQDATRREAMSEKK 95
>gi|389642189|ref|XP_003718727.1| U6 snRNA-associated Sm-like protein LSm2 [Magnaporthe oryzae
70-15]
gi|351641280|gb|EHA49143.1| U6 snRNA-associated Sm-like protein LSm2 [Magnaporthe oryzae
70-15]
gi|440468055|gb|ELQ37238.1| snRNA-associated protein [Magnaporthe oryzae Y34]
gi|440489015|gb|ELQ68696.1| snRNA-associated protein [Magnaporthe oryzae P131]
Length = 97
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 72/92 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ ++ VELKN + I GTL SVDQYLN+KL DISV + KYPH+ +VKN
Sbjct: 1 MLFFSFFKTLIDVEITVELKNSIQIRGTLKSVDQYLNLKLDDISVVEDIKYPHLSAVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRY+ LP VD LL+DATR+EA +
Sbjct: 61 FIRGSVVRYIHLPASHVDVPLLEDATRREAAS 92
>gi|310800349|gb|EFQ35242.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 98
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 70/89 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ +V VELKND+ I G L SVDQYLNIKL +ISV + KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLIDHEVTVELKNDIQIRGVLKSVDQYLNIKLEEISVVEELKYPHLSSVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGSVVRYV LP VD LL+DATR+E
Sbjct: 61 FIRGSVVRYVHLPAGSVDVPLLEDATRRE 89
>gi|156095438|ref|XP_001613754.1| U6 snRNA-associated Sm-like protein LSm4 [Plasmodium vivax Sal-1]
gi|221056945|ref|XP_002259610.1| U6 snRNA-associated sm-like protein Lsm2 [Plasmodium knowlesi
strain H]
gi|148802628|gb|EDL44027.1| U6 snRNA-associated Sm-like protein LSm4, putative [Plasmodium
vivax]
gi|193809682|emb|CAQ40383.1| U6 snRNA-associated sm-like protein Lsm2,putative [Plasmodium
knowlesi strain H]
Length = 103
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 72/92 (78%), Gaps = 2/92 (2%)
Query: 4 LLFYSFFKSLVGKD--VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
+LF++FF+ L K+ V VELKND+ I G LHSVDQYLNIKLT+++V P+KYPH+LS+K
Sbjct: 1 MLFFTFFQQLAEKNHHVTVELKNDLQISGVLHSVDQYLNIKLTNVTVNHPEKYPHLLSIK 60
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
+CF+RGSVVRYV LP E+D + L RKEA
Sbjct: 61 SCFVRGSVVRYVFLPSKEIDVEKLHHMCRKEA 92
>gi|380496303|emb|CCF31809.1| U6 snRNA-associated Sm-like protein LSm2 [Colletotrichum
higginsianum]
Length = 98
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 70/89 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ +V VELKND+ I G L SVDQYLNIKL +ISV + KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLIDHEVTVELKNDIQIRGILKSVDQYLNIKLEEISVVEELKYPHLSSVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGSVVRYV LP VD LL+DATR+E
Sbjct: 61 FIRGSVVRYVHLPAGSVDVPLLEDATRRE 89
>gi|82541052|ref|XP_724797.1| Sm protein [Plasmodium yoelii yoelii 17XNL]
gi|23479567|gb|EAA16362.1| Sm protein, putative [Plasmodium yoelii yoelii]
Length = 125
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 74/91 (81%), Gaps = 2/91 (2%)
Query: 5 LFYSFFKSLVGKD--VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
LF++FF+ L K+ + +ELKND+ I G LHSVDQYLNIKLT+ISV +P+KYPH+LS+K+
Sbjct: 23 LFFTFFQQLAEKNQHITIELKNDLQISGVLHSVDQYLNIKLTNISVNNPEKYPHLLSIKS 82
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
CF+RGSVVRYV LP +EV+ + L+ R+EA
Sbjct: 83 CFVRGSVVRYVFLPSNEVNVEKLRHMCRQEA 113
>gi|68065924|ref|XP_674946.1| u6 snRNA-associated sm-like protein [Plasmodium berghei strain
ANKA]
gi|56493843|emb|CAI00099.1| u6 snRNA-associated sm-like protein Lsm2, putative [Plasmodium
berghei]
Length = 125
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 73/91 (80%), Gaps = 2/91 (2%)
Query: 5 LFYSFFKSLVGKD--VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
LF++FF+ L K+ + +ELKND+ I G LHSVDQYLNIKLT+ISV +P+KYPH+LS+K
Sbjct: 23 LFFTFFQQLAEKNQHITIELKNDLQISGVLHSVDQYLNIKLTNISVNNPEKYPHLLSIKT 82
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
CF+RGSVVRYV LP +EV+ + L+ R+EA
Sbjct: 83 CFVRGSVVRYVFLPSNEVNIEKLRHMCRQEA 113
>gi|320591852|gb|EFX04291.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 113
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 67/88 (76%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
FFK+L+ V VELKND+ I GTL SVDQYLNIKL DI+V + KYPHM +VKN FIRG
Sbjct: 17 GFFKTLIDTTVTVELKNDIQIRGTLKSVDQYLNIKLDDITVVEEIKYPHMSAVKNVFIRG 76
Query: 68 SVVRYVQLPGDEVDTQLLQDATRKEAVN 95
SVVRYV LP VD LL+DATR+EA N
Sbjct: 77 SVVRYVHLPAAAVDVSLLEDATRREAAN 104
>gi|255719896|ref|XP_002556228.1| KLTH0H08008p [Lachancea thermotolerans]
gi|238942194|emb|CAR30366.1| KLTH0H08008p [Lachancea thermotolerans CBS 6340]
Length = 95
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 76/95 (80%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ + GTL SVDQ+LN+KL +IS ++ KYPH+ SV+N
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDIELKGTLKSVDQFLNLKLDNISCSNESKYPHLSSVRNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGS VRYV L + VDT LLQDA R+EA++A +
Sbjct: 61 FIRGSTVRYVYLNKNMVDTNLLQDAARREAMSARK 95
>gi|156841541|ref|XP_001644143.1| hypothetical protein Kpol_1053p22 [Vanderwaltozyma polyspora DSM
70294]
gi|156114779|gb|EDO16285.1| hypothetical protein Kpol_1053p22 [Vanderwaltozyma polyspora DSM
70294]
Length = 95
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 74/95 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ + GTL SVDQ+LN+KL +IS TD KYPH+ SV+N
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDIELKGTLKSVDQFLNLKLDNISCTDEQKYPHLGSVRNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGS VRYV L VDT LLQDA R+EA++ +
Sbjct: 61 FIRGSTVRYVYLQKSMVDTNLLQDAARREAMSEKK 95
>gi|393238250|gb|EJD45788.1| U6 snRNA-associated Sm-like protein LSm2, partial [Auricularia
delicata TFB-10046 SS5]
Length = 101
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
L +S FK+L + V VELKND+ I G L SVDQ+LNI+L I V D ++PHM ++KNCF
Sbjct: 8 LIFSVFKTLTDQTVTVELKNDLCITGVLKSVDQFLNIRLDSIKVLDEARHPHM-ALKNCF 66
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
IRGSVVRYVQLP + VDTQLL+DATR+EA N +
Sbjct: 67 IRGSVVRYVQLPANAVDTQLLEDATRREAANQAK 100
>gi|237843693|ref|XP_002371144.1| u6 snRNA-associated sm-like protein Lsm2, putative [Toxoplasma
gondii ME49]
gi|211968808|gb|EEB04004.1| u6 snRNA-associated sm-like protein Lsm2, putative [Toxoplasma
gondii ME49]
gi|221481638|gb|EEE20020.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 101
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
Query: 4 LLFYSFFKSLVGKD--VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
++F+SFF++LV + ++VELKND+ I G+LHSVDQ+LNIKL ++SV DP++ PH+LSVK
Sbjct: 1 MMFFSFFQTLVERQTQIMVELKNDLQITGSLHSVDQFLNIKLNNVSVADPERCPHLLSVK 60
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNAT 97
NCFIRGS VRYV LP VD LQD R+E+ +
Sbjct: 61 NCFIRGSAVRYVHLPPSAVDVSQLQDMCRRESAGSN 96
>gi|388855778|emb|CCF50562.1| related to LSM2-Sm-like (Lsm) protein [Ustilago hordei]
Length = 96
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 74/95 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L +S FK+L G+ V +ELKND++I GTL SVDQ+LN K+ +I V + K+PHM++VK+
Sbjct: 1 MLIFSAFKTLTGQQVTIELKNDLAIQGTLKSVDQFLNFKVDNIRVLNEAKHPHMMAVKSA 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYV +P VDTQLL+DATR+EA + +
Sbjct: 61 FIRGSVVRYVHIPAAAVDTQLLEDATRREAASQAK 95
>gi|425767839|gb|EKV06392.1| hypothetical protein PDIG_77590 [Penicillium digitatum PHI26]
gi|425783770|gb|EKV21591.1| hypothetical protein PDIP_04700 [Penicillium digitatum Pd1]
Length = 121
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 68/88 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L + V +ELKND+ I G L SVDQYLNIKL DI V D KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLTNQTVTIELKNDIRIRGILKSVDQYLNIKLDDIEVLDLAKYPHLSSVKNM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
FIRGSVVRYV LP EVD LL+DATR+
Sbjct: 61 FIRGSVVRYVMLPRSEVDVGLLEDATRR 88
>gi|225683183|gb|EEH21467.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb03]
Length = 118
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 69/88 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L V VELKND+ I GTL SVDQYLNIKL DI V D D+YPH+ SVKN
Sbjct: 1 MLFFSFFKTLTNHTVTVELKNDIRIRGTLKSVDQYLNIKLDDIEVLDLDQYPHLSSVKNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
F+RGSVVRYV LP EVD LL+DATR+
Sbjct: 61 FVRGSVVRYVVLPQAEVDRGLLEDATRR 88
>gi|213405801|ref|XP_002173672.1| U6 snRNP-associated protein core protein [Schizosaccharomyces
japonicus yFS275]
gi|212001719|gb|EEB07379.1| U6 snRNP-associated protein core protein [Schizosaccharomyces
japonicus yFS275]
Length = 96
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 72/95 (75%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFK+L+ +V VELKND+ I G L SVDQ+LN+KL +ISVTD KYPH+ +VKN
Sbjct: 1 MLFYSFFKTLIDTEVTVELKNDMCIRGVLKSVDQFLNVKLENISVTDVQKYPHLAAVKNL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYV + VDT LL DA R++ N+ R
Sbjct: 61 FIRGSVVRYVHMSSSHVDTILLADACRRDLANSRR 95
>gi|367000273|ref|XP_003684872.1| hypothetical protein TPHA_0C02850 [Tetrapisispora phaffii CBS
4417]
gi|357523169|emb|CCE62438.1| hypothetical protein TPHA_0C02850 [Tetrapisispora phaffii CBS
4417]
Length = 95
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 74/95 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ + GTL SVDQ+LN+KL +IS D KYPH+ SV+N
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDIELKGTLKSVDQFLNLKLDNISCNDKTKYPHLTSVRNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGS VRYV L + VDT LLQDA R+EA++ R
Sbjct: 61 FIRGSNVRYVYLQKNMVDTNLLQDAARREAMSDKR 95
>gi|221504601|gb|EEE30274.1| u6 snRNA-associated sm-like protein Lsm2, putative [Toxoplasma
gondii VEG]
Length = 100
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
Query: 5 LFYSFFKSLVGKD--VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
+F+SFF++LV + ++VELKND+ I G+LHSVDQ+LNIKL ++SV DP++ PH+LSVKN
Sbjct: 1 MFFSFFQTLVERQTQIMVELKNDLQITGSLHSVDQFLNIKLNNVSVADPERCPHLLSVKN 60
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNAT 97
CFIRGS VRYV LP VD LQD R+E+ +
Sbjct: 61 CFIRGSAVRYVHLPPSAVDVSQLQDMCRRESAGSN 95
>gi|401397969|ref|XP_003880184.1| hypothetical protein NCLIV_006240 [Neospora caninum Liverpool]
gi|325114593|emb|CBZ50149.1| hypothetical protein NCLIV_006240 [Neospora caninum Liverpool]
Length = 101
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 74/95 (77%), Gaps = 2/95 (2%)
Query: 4 LLFYSFFKSLVGKD--VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
++F+SFF++LV + ++VELKND+ I G+LHSVDQ+LNIKL ++SV DP+K PH+LS+K
Sbjct: 1 MMFFSFFQTLVERQTQIMVELKNDLQITGSLHSVDQFLNIKLNNVSVADPEKCPHLLSIK 60
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
NCF+RGS VRYV LP VD LQD R+E+ +
Sbjct: 61 NCFVRGSAVRYVHLPPSAVDVGQLQDMCRRESASG 95
>gi|254585643|ref|XP_002498389.1| ZYRO0G09086p [Zygosaccharomyces rouxii]
gi|238941283|emb|CAR29456.1| ZYRO0G09086p [Zygosaccharomyces rouxii]
Length = 95
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 74/95 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++VVVELKND+ + GTL SVDQ+LN+KL +IS TD KYPH+ SV+N
Sbjct: 1 MLFFSFFKTLVDQEVVVELKNDIELKGTLKSVDQFLNLKLDNISCTDQTKYPHLGSVRNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGS VRYV L + VD LLQDA R+EA+ +
Sbjct: 61 FIRGSTVRYVYLNKNMVDINLLQDAARREAMTEKK 95
>gi|410077643|ref|XP_003956403.1| hypothetical protein KAFR_0C02750 [Kazachstania africana CBS
2517]
gi|372462987|emb|CCF57268.1| hypothetical protein KAFR_0C02750 [Kazachstania africana CBS
2517]
Length = 95
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 75/95 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++VVV+LKND+ I GTL SVDQ+LN+KL +IS TD KYPH+ SV+N
Sbjct: 1 MLFFSFFKTLVDQEVVVQLKNDIEIKGTLQSVDQFLNLKLDNISCTDETKYPHLGSVRNM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGS VRYV L + VD LLQDATR+E ++ +
Sbjct: 61 FIRGSTVRYVYLNKNMVDKNLLQDATRREIMSEKK 95
>gi|121716437|ref|XP_001275808.1| small nuclear ribonucleoprotein (LSM2), putative [Aspergillus
clavatus NRRL 1]
gi|119403965|gb|EAW14382.1| small nuclear ribonucleoprotein (LSM2), putative [Aspergillus
clavatus NRRL 1]
Length = 98
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/92 (68%), Positives = 73/92 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L + V +ELKND+ I GTL SVDQYLNIKL D+ V D DKYPH+ SVKN
Sbjct: 1 MLFFSFFKTLTNQTVTIELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLDKYPHLSSVKNM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYV LP EVD LL+DATR+EA N
Sbjct: 61 FIRGSVVRYVMLPRSEVDVGLLEDATRREAAN 92
>gi|238488709|ref|XP_002375592.1| small nuclear ribonucleoprotein (LSM2), putative [Aspergillus
flavus NRRL3357]
gi|317136870|ref|XP_003189990.1| U6 snRNA-associated Sm-like protein LSm2 [Aspergillus oryzae
RIB40]
gi|220697980|gb|EED54320.1| small nuclear ribonucleoprotein (LSM2), putative [Aspergillus
flavus NRRL3357]
Length = 98
Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/92 (68%), Positives = 74/92 (80%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L + V++ELKND+ I GTL SVDQYLNIKL D+ V D DKYPH+ SVKN
Sbjct: 1 MLFFSFFKTLTNQTVIIELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLDKYPHLSSVKNM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYV LP EVD LL+DATR+EA N
Sbjct: 61 FIRGSVVRYVVLPRSEVDVGLLEDATRREAAN 92
>gi|145242038|ref|XP_001393665.1| U6 snRNA-associated Sm-like protein LSm2 [Aspergillus niger CBS
513.88]
gi|134078209|emb|CAK40288.1| unnamed protein product [Aspergillus niger]
gi|358374995|dbj|GAA91582.1| small nuclear ribonucleoprotein [Aspergillus kawachii IFO 4308]
Length = 98
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/92 (68%), Positives = 73/92 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L + V +ELKND+ I GTL SVDQYLNIKL D+ V D DKYPH+ SVKN
Sbjct: 1 MLFFSFFKTLTNQTVTIELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLDKYPHLSSVKNM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYV LP EVD LL+DATR+EA N
Sbjct: 61 FIRGSVVRYVMLPRSEVDIGLLEDATRREAAN 92
>gi|50288309|ref|XP_446583.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525891|emb|CAG59510.1| unnamed protein product [Candida glabrata]
Length = 95
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 72/89 (80%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++VVV+LKND+ I GTL SVDQ+LN+KL +IS D KYPH+ SV+N
Sbjct: 1 MLFFSFFKTLVDQEVVVQLKNDIEIKGTLQSVDQFLNLKLDNISCNDDKKYPHLSSVRNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGS VRYV L + VDT LLQDATR+E
Sbjct: 61 FIRGSTVRYVYLNKNMVDTNLLQDATRRE 89
>gi|401882879|gb|EJT47119.1| prenyltransferase [Trichosporon asahii var. asahii CBS 2479]
Length = 803
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 55/83 (66%), Positives = 67/83 (80%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
FFK+L + + VELKND+ I GTL SVDQ+LNI+L I V DP+KYPHML+VKN FIRGS
Sbjct: 15 FFKTLTDQVITVELKNDLCITGTLKSVDQFLNIRLDGIRVEDPEKYPHMLAVKNVFIRGS 74
Query: 69 VVRYVQLPGDEVDTQLLQDATRK 91
VVRYV++P VDT LL+DATR+
Sbjct: 75 VVRYVRMPARTVDTTLLEDATRR 97
>gi|353239883|emb|CCA71776.1| related to LSM2-Sm-like (Lsm) protein [Piriformospora indica DSM
11827]
Length = 94
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 70/90 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L +S FK+L V VELKND+ I G L SVDQYLNI+L I V + +++PHM++VKNC
Sbjct: 1 MLIFSVFKTLTDHTVTVELKNDLCITGVLKSVDQYLNIRLDAIKVENAEQHPHMMAVKNC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSV+RYVQLP +D QLL+DATR+E+
Sbjct: 61 FIRGSVIRYVQLPASAMDIQLLEDATRRES 90
>gi|443916754|gb|ELU37715.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 112
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 75/111 (67%), Gaps = 16/111 (14%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLS---- 59
+L +S FK+L ++V VELKND+SI G L SVDQ+LN++L I V D ++PHM+S
Sbjct: 1 MLIFSVFKTLTDQEVTVELKNDLSITGVLKSVDQFLNVRLDAIKVHDEARHPHMVSLDIL 60
Query: 60 ------------VKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
VKNCFIRGSV+RYVQLP VDTQLL+DATRKEA N +
Sbjct: 61 FVGLPLPIEQMAVKNCFIRGSVIRYVQLPASGVDTQLLEDATRKEAANQAK 111
>gi|58264746|ref|XP_569529.1| u6 snRNA-associated sm-like protein lsm2 [Cryptococcus neoformans
var. neoformans JEC21]
gi|57225761|gb|AAW42222.1| u6 snRNA-associated sm-like protein lsm2, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 108
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/81 (66%), Positives = 69/81 (85%)
Query: 13 LVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRY 72
LV + + VELKND+SI GTL SVDQ+LNI+L +ISV DP+++PHM++VKNCFIRGSVVRY
Sbjct: 23 LVNQVITVELKNDLSITGTLKSVDQFLNIRLDNISVEDPERHPHMMAVKNCFIRGSVVRY 82
Query: 73 VQLPGDEVDTQLLQDATRKEA 93
V++ VDT LL+DATR+EA
Sbjct: 83 VRMAARSVDTTLLEDATRREA 103
>gi|169623821|ref|XP_001805317.1| hypothetical protein SNOG_15154 [Phaeosphaeria nodorum SN15]
gi|396472521|ref|XP_003839139.1| similar to U6 snRNA-associated Sm-like protein LSm2
[Leptosphaeria maculans JN3]
gi|111056259|gb|EAT77379.1| hypothetical protein SNOG_15154 [Phaeosphaeria nodorum SN15]
gi|312215708|emb|CBX95660.1| similar to U6 snRNA-associated Sm-like protein LSm2
[Leptosphaeria maculans JN3]
Length = 98
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 70/93 (75%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++ VELKN+V I GTL SVDQYLNIKL + D ++PH+ S K+
Sbjct: 1 MLFFSFFKTLVEHEITVELKNEVQIRGTLKSVDQYLNIKLDNAEAVDEMRWPHLCSTKDM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
FIRGSVVRYV LP VDT LL+DATR+EA A
Sbjct: 61 FIRGSVVRYVHLPSGAVDTALLEDATRREAEAA 93
>gi|256269256|gb|EEU04578.1| Lsm2p [Saccharomyces cerevisiae JAY291]
Length = 96
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 4 LLFYSFFKSLVGKDVVVE-LKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
+LF+SFFK+LV ++VVVE LKND+ I GTL SVDQ+LN+KL +IS TD KYPH+ SV+N
Sbjct: 1 MLFFSFFKTLVDQEVVVEVLKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLGSVRN 60
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
FIRGS VRYV L + VDT LLQDATR+E +
Sbjct: 61 IFIRGSTVRYVYLNKNMVDTNLLQDATRREVM 92
>gi|19075959|ref|NP_588459.1| U6 snRNP-associated protein core protein (predicted)
[Schizosaccharomyces pombe 972h-]
gi|59799782|sp|O94408.1|LSM2_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm2
gi|4008568|emb|CAA22485.1| U6 snRNP-associated protein core protein (predicted)
[Schizosaccharomyces pombe]
Length = 96
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 71/95 (74%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFK+L+ +V VELKND+SI G L SVDQ+LN+KL +ISV D KYPHM +VK+
Sbjct: 1 MLFYSFFKTLIDTEVTVELKNDMSIRGILKSVDQFLNVKLENISVVDASKYPHMAAVKDL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYV + VDT LL DA R++ N R
Sbjct: 61 FIRGSVVRYVHMSSAYVDTILLADACRRDLANNKR 95
>gi|164656198|ref|XP_001729227.1| hypothetical protein MGL_3694 [Malassezia globosa CBS 7966]
gi|159103117|gb|EDP42013.1| hypothetical protein MGL_3694 [Malassezia globosa CBS 7966]
Length = 93
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 69/88 (78%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
+S FK+L G+ V VELKND++I GTL SVDQ+LN KL DI V D +YPHML+VK+ FI
Sbjct: 1 MFSAFKTLTGQTVTVELKNDLAIQGTLKSVDQFLNFKLDDIKVLDEARYPHMLAVKSTFI 60
Query: 66 RGSVVRYVQLPGDEVDTQLLQDATRKEA 93
RGSVVR V +P VDTQLL+DATR+E+
Sbjct: 61 RGSVVRSVHIPAAAVDTQLLEDATRRES 88
>gi|189204055|ref|XP_001938363.1| hypothetical protein PTRG_08031 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330923085|ref|XP_003300092.1| hypothetical protein PTT_11246 [Pyrenophora teres f. teres 0-1]
gi|187985462|gb|EDU50950.1| hypothetical protein PTRG_08031 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325945|gb|EFQ91825.1| hypothetical protein PTT_11246 [Pyrenophora teres f. teres 0-1]
gi|451849910|gb|EMD63213.1| hypothetical protein COCSADRAFT_338961 [Cochliobolus sativus
ND90Pr]
gi|452000740|gb|EMD93200.1| hypothetical protein COCHEDRAFT_1211939 [Cochliobolus
heterostrophus C5]
gi|452001734|gb|EMD94193.1| hypothetical protein COCHEDRAFT_1153497 [Cochliobolus
heterostrophus C5]
Length = 98
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 70/93 (75%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++ VELKN+V I GTL SVDQYLNIKL + D ++PH+ S K+
Sbjct: 1 MLFFSFFKTLVEHEITVELKNEVQIRGTLKSVDQYLNIKLDNAEAVDELRWPHLCSTKDM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
FIRGSVVRYV LP VDT LL+DATR+EA A
Sbjct: 61 FIRGSVVRYVHLPSGAVDTALLEDATRREAEAA 93
>gi|403224094|dbj|BAM42224.1| U6 snRNP protein Lsm2 [Theileria orientalis strain Shintoku]
Length = 100
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 75/96 (78%), Gaps = 2/96 (2%)
Query: 4 LLFYSFFKSLVGKD--VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
+LFY+FF++LV K+ V +ELKND+ I G LHSVDQYLNIKLT+++ D D+YPH+LSV
Sbjct: 1 MLFYNFFQTLVEKNAKVTIELKNDLQISGKLHSVDQYLNIKLTNVTANDTDRYPHLLSVV 60
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNAT 97
NCFIRGSVVRYV ++DT+ LQ+ R++A+ T
Sbjct: 61 NCFIRGSVVRYVFFNPSDIDTEELQELCRRQAMKQT 96
>gi|430813736|emb|CCJ28938.1| unnamed protein product [Pneumocystis jirovecii]
Length = 99
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 71/90 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFK+L+ VVVELKND+SI G L S DQ+LN+++ D V + KYPH+ +VKN
Sbjct: 1 MLFYSFFKTLIDTQVVVELKNDLSIRGILKSCDQFLNLRIDDCQVLEELKYPHLSAVKNM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRGSVVRYV +P + VDT LL+DATR+EA
Sbjct: 61 FIRGSVVRYVHIPSENVDTSLLEDATRREA 90
>gi|350296125|gb|EGZ77102.1| U6 snRNA-associated Sm-like protein LSm2 [Neurospora tetrasperma
FGSC 2509]
Length = 106
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 70/88 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ +V VELKND+ I G L SVDQ+LNIKL +I V + KYPH+ +VKN
Sbjct: 1 MLFFSFFKTLIDHEVTVELKNDIQIRGVLKSVDQFLNIKLDNIQVVEELKYPHLSAVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
FIRGSVVRYV LP + VD QLL+DATR+
Sbjct: 61 FIRGSVVRYVHLPQESVDIQLLEDATRR 88
>gi|259483912|tpe|CBF79688.1| TPA: small nuclear ribonucleoprotein (LSM2), putative
(AFU_orthologue; AFUA_2G15210) [Aspergillus nidulans
FGSC A4]
Length = 98
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 73/92 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L + V +ELKND+ I GTL SVDQYLNIKL DI V D DKYPH+ SVKN
Sbjct: 1 MLFFSFFKTLTNQVVTIELKNDIRIRGTLKSVDQYLNIKLDDIDVLDLDKYPHLSSVKNM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYV LP EVD LL+DATR+EA N
Sbjct: 61 FIRGSVVRYVVLPRSEVDVGLLEDATRREAAN 92
>gi|45198700|ref|NP_985729.1| AFR182Cp [Ashbya gossypii ATCC 10895]
gi|44984710|gb|AAS53553.1| AFR182Cp [Ashbya gossypii ATCC 10895]
gi|374108960|gb|AEY97866.1| FAFR182Cp [Ashbya gossypii FDAG1]
Length = 95
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ + GTL SVDQ+LN+KL +IS + KYPH+ SV+N
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDIELKGTLKSVDQFLNLKLDNISCNNEAKYPHLSSVRNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGS VRYV L VDT LLQDA R+EA++ +
Sbjct: 61 FIRGSTVRYVYLKKGMVDTNLLQDAARREAMSERK 95
>gi|325087346|gb|EGC40656.1| small nuclear ribonucleoprotein LSM2 [Ajellomyces capsulatus H88]
Length = 148
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 67/87 (77%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
FFK++ V +ELKND+ I GTL SVDQYLNIKL DI V D D+YPH+ SVKN F+RGS
Sbjct: 56 FFKTITNHTVTIELKNDIRIRGTLKSVDQYLNIKLDDIEVLDLDEYPHLSSVKNIFVRGS 115
Query: 69 VVRYVQLPGDEVDTQLLQDATRKEAVN 95
VVRY+ LP EVD LL+DATR+EA N
Sbjct: 116 VVRYIVLPQAEVDRGLLEDATRREAEN 142
>gi|258575267|ref|XP_002541815.1| SNP3 protein [Uncinocarpus reesii 1704]
gi|237902081|gb|EEP76482.1| SNP3 protein [Uncinocarpus reesii 1704]
Length = 1064
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 55/84 (65%), Positives = 66/84 (78%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
+FFK+L V++ELKND+ I GTL SVDQYLN+KL DI V D DKYPH+ SVKN FIRG
Sbjct: 921 NFFKTLTNHTVIIELKNDIRIRGTLKSVDQYLNVKLDDIEVIDLDKYPHLSSVKNIFIRG 980
Query: 68 SVVRYVQLPGDEVDTQLLQDATRK 91
SVVRY+ LP + VD LL+DATR+
Sbjct: 981 SVVRYIVLPQEAVDRGLLEDATRR 1004
>gi|156063184|ref|XP_001597514.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154697044|gb|EDN96782.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 89
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 66/85 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV +V VELKND+ I G L SVDQYLNIKL DI V + KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLVDSEVTVELKNDIQIKGILKSVDQYLNIKLDDIQVVEELKYPHLSSVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDA 88
FIRGSVVRYV LPG VDT LL+D
Sbjct: 61 FIRGSVVRYVHLPGGAVDTTLLEDG 85
>gi|50555508|ref|XP_505162.1| YALI0F08459p [Yarrowia lipolytica]
gi|49651032|emb|CAG77969.1| YALI0F08459p [Yarrowia lipolytica CLIB122]
Length = 99
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 73/92 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+S FK+LV ++ VELKND+ I G L SVDQ++NIKL +++ + DK+PH+ +V++
Sbjct: 1 MLFFSLFKTLVNHEITVELKNDLQIRGILKSVDQFMNIKLENVTTVEEDKFPHLTAVRDL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGSVVRYV LP VDT LL+DATR+EA++
Sbjct: 61 FIRGSVVRYVHLPPGAVDTTLLEDATRREALS 92
>gi|321253219|ref|XP_003192670.1| u6 snRNA-associated sm-like protein lsm2 [Cryptococcus gattii
WM276]
gi|317459139|gb|ADV20883.1| u6 snRNA-associated sm-like protein lsm2, putative [Cryptococcus
gattii WM276]
Length = 105
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 66/76 (86%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPG 77
+ VELKND+SI GTL SVDQ+LNI+L +ISV DP+K+PHM++VKNCFIRGSVVRYV++
Sbjct: 25 ITVELKNDLSITGTLKSVDQFLNIRLDNISVEDPEKHPHMMAVKNCFIRGSVVRYVRMAA 84
Query: 78 DEVDTQLLQDATRKEA 93
VDT LL+DATR+EA
Sbjct: 85 RSVDTTLLEDATRREA 100
>gi|448525765|ref|XP_003869197.1| Snp3 U6 snRNA-associated protein [Candida orthopsilosis Co
90-125]
gi|380353550|emb|CCG23061.1| Snp3 U6 snRNA-associated protein [Candida orthopsilosis]
Length = 96
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 73/91 (80%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I G L SVDQYLN+KL DI+ T+ DKYP++ +VKN
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDMEIRGILKSVDQYLNLKLDDITCTNCDKYPYLDAVKNL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
FIRGS VRYV + + VD LLQDA+R+EA+
Sbjct: 61 FIRGSTVRYVHMNPNSVDCTLLQDASRREAM 91
>gi|190344551|gb|EDK36242.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 195
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 70/92 (76%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I GTL +VDQYLN+KL ++ + DKYPHM SVKN
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDIEIRGTLKTVDQYLNLKLDNVICLNEDKYPHMQSVKNL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGS VRYV + + VD LLQDA+R+ N
Sbjct: 61 FIRGSTVRYVHMSSNTVDCTLLQDASRRGMYN 92
>gi|146422042|ref|XP_001486963.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 195
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 70/92 (76%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I GTL +VDQYLN+KL ++ + DKYPHM SVKN
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDIEIRGTLKTVDQYLNLKLDNVICLNEDKYPHMQSVKNL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FIRGS VRYV + + VD LLQDA+R+ N
Sbjct: 61 FIRGSTVRYVHMSSNTVDCTLLQDASRRGMYN 92
>gi|363754415|ref|XP_003647423.1| hypothetical protein Ecym_6224 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891060|gb|AET40606.1| hypothetical protein Ecym_6224 [Eremothecium cymbalariae
DBVPG#7215]
Length = 95
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 72/95 (75%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SF K+LV ++V VELKND+ + GTL SVDQ+LN+KL +IS + KYPH+ SV+N
Sbjct: 1 MLFFSFLKTLVDQEVTVELKNDIELKGTLKSVDQFLNLKLDNISCNNNAKYPHLSSVRNI 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGS VRYV L VDT LLQDA R+EAV+ +
Sbjct: 61 FIRGSTVRYVYLNKSIVDTNLLQDAARREAVSEKK 95
>gi|354545836|emb|CCE42565.1| hypothetical protein CPAR2_202080 [Candida parapsilosis]
Length = 96
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 73/91 (80%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I G L SVDQYLN+KL D++ T+ DKYP++ +VKN
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDMEIRGILKSVDQYLNLKLDDVTCTNCDKYPYLDAVKNL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
FIRGS VRYV + + VD LLQDA+R+EA+
Sbjct: 61 FIRGSTVRYVHMNPNSVDCTLLQDASRREAM 91
>gi|344303994|gb|EGW34243.1| snRNA-associated protein, Sm class [Spathaspora passalidarum NRRL
Y-27907]
Length = 100
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 71/89 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I GTL SVDQYLN+KL +IS T+ +KYPH+ SVK
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDMEIKGTLKSVDQYLNLKLDNISCTNGNKYPHLQSVKTL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGS VRYV + + VD LLQDA+R++
Sbjct: 61 FIRGSTVRYVHMSPNSVDCTLLQDASRRK 89
>gi|393238251|gb|EJD45789.1| U6 snRNA-associated Sm-like protein LSm2 [Auricularia delicata
TFB-10046 SS5]
Length = 97
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ K+L + V VELKND+ I G L SVDQ+LNI+L I V D ++PHM ++KNCFIRGS
Sbjct: 8 YSKTLTDQTVTVELKNDLCITGVLKSVDQFLNIRLDSIKVLDEARHPHM-ALKNCFIRGS 66
Query: 69 VVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
VVRYVQLP + VDTQLL+DATR+EA N +
Sbjct: 67 VVRYVQLPANAVDTQLLEDATRREAANQAK 96
>gi|115401818|ref|XP_001216497.1| hypothetical protein ATEG_07876 [Aspergillus terreus NIH2624]
gi|114190438|gb|EAU32138.1| hypothetical protein ATEG_07876 [Aspergillus terreus NIH2624]
Length = 957
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 60/89 (67%), Positives = 71/89 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L + V +ELKND+ I GTL SVDQYLNIKL D+ V D DKYPH+ SVKN
Sbjct: 1 MLFFSFFKTLTNQTVTIELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLDKYPHLSSVKNM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGSVVRYV LP EVD LL+DATR++
Sbjct: 61 FIRGSVVRYVMLPRSEVDIGLLEDATRRD 89
>gi|392575894|gb|EIW69026.1| hypothetical protein TREMEDRAFT_31143, partial [Tremella
mesenterica DSM 1558]
Length = 97
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 68/83 (81%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
FFK+L + + VELKND+ I GTL SVDQ+LNI+L I+V DP+++PHM++VKNCFIRGS
Sbjct: 1 FFKTLTDQVITVELKNDLCITGTLKSVDQFLNIRLDGITVEDPERHPHMMAVKNCFIRGS 60
Query: 69 VVRYVQLPGDEVDTQLLQDATRK 91
VVRYV++ VDT LL+DATR+
Sbjct: 61 VVRYVRMGARSVDTTLLEDATRR 83
>gi|50310953|ref|XP_455499.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644635|emb|CAG98207.1| KLLA0F09207p [Kluyveromyces lactis]
Length = 95
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 68/89 (76%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L +SFFK+LV +V VELKN + + GTL SVDQ+LN+KL +IS + +KYPH+ SV+N
Sbjct: 1 MLLFSFFKTLVDHEVKVELKNGIELTGTLKSVDQFLNLKLDNISSNNNEKYPHLSSVRNM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRGS VRYV L VDT LLQDATR+E
Sbjct: 61 FIRGSTVRYVHLKKSMVDTNLLQDATRRE 89
>gi|156084604|ref|XP_001609785.1| u6 snRNA-associated sm-like protein Lsm2 [Babesia bovis T2Bo]
gi|156084652|ref|XP_001609809.1| u6 snRNA-associated sm-like protein Lsm2 [Babesia bovis T2Bo]
gi|156084660|ref|XP_001609813.1| u6 snRNA-associated sm-like protein [Babesia bovis T2Bo]
gi|154797037|gb|EDO06217.1| u6 snRNA-associated sm-like protein Lsm2, putative [Babesia
bovis]
gi|154797061|gb|EDO06241.1| u6 snRNA-associated sm-like protein Lsm2, putative [Babesia
bovis]
gi|154797065|gb|EDO06245.1| u6 snRNA-associated sm-like protein, putative [Babesia bovis]
Length = 99
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 74/95 (77%), Gaps = 2/95 (2%)
Query: 4 LLFYSFFKSLV--GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
+LF++FF+SL G V VELKND+ + G LH+VDQYLN KL++++ +D ++YPH+LSV
Sbjct: 1 MLFFNFFQSLAEKGASVTVELKNDLQLTGRLHAVDQYLNFKLSNVTASDTERYPHLLSVV 60
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
NCF+RGSVVRYV L +V+T+ LQ+ R+EA+ +
Sbjct: 61 NCFVRGSVVRYVYLNSSDVNTEELQELCRREAMKS 95
>gi|255721349|ref|XP_002545609.1| hypothetical protein CTRG_00390 [Candida tropicalis MYA-3404]
gi|240136098|gb|EER35651.1| hypothetical protein CTRG_00390 [Candida tropicalis MYA-3404]
Length = 96
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 74/91 (81%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I GTL SVDQ+LN+KL +I+ T+ ++YP++ +VKN
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDMEIKGTLKSVDQFLNLKLDNITCTNSEQYPYLDAVKNL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
FIRGS VRYV + + VD LLQDA+R+EA+
Sbjct: 61 FIRGSTVRYVHMNPNSVDCTLLQDASRREAM 91
>gi|294933163|ref|XP_002780629.1| U6 snRNP protein Lsm2, putative [Perkinsus marinus ATCC 50983]
gi|239890563|gb|EER12424.1| U6 snRNP protein Lsm2, putative [Perkinsus marinus ATCC 50983]
Length = 102
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 71/91 (78%), Gaps = 4/91 (4%)
Query: 4 LLFYSFFKSLV--GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
+LF+ FF+SLV G V VE+KNDV I GTL +VDQY N+KL +IS+ +P++YPH+LS++
Sbjct: 1 MLFFDFFQSLVDSGAQVTVEMKNDVQITGTLQAVDQYFNVKLKNISINNPEQYPHLLSLR 60
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
NCFIRGSVVRY+ LP ++ TQ L D RKE
Sbjct: 61 NCFIRGSVVRYIHLP--DMYTQGLTDQCRKE 89
>gi|323448092|gb|EGB03995.1| hypothetical protein AURANDRAFT_33162 [Aureococcus
anophagefferens]
Length = 91
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 68/83 (81%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
+ FK+LVGK++ VELKNDV++ GTLHS+DQYLNIKL + V D ++P +++V + F+RG
Sbjct: 1 AMFKTLVGKEIAVELKNDVALTGTLHSIDQYLNIKLLNTKVVDAARHPQLVAVTSVFVRG 60
Query: 68 SVVRYVQLPGDEVDTQLLQDATR 90
SVVRY+Q+P +VDT+LLQDA R
Sbjct: 61 SVVRYIQIPAADVDTELLQDACR 83
>gi|50425359|ref|XP_461273.1| DEHA2F21252p [Debaryomyces hansenii CBS767]
gi|49656942|emb|CAG89664.1| DEHA2F21252p [Debaryomyces hansenii CBS767]
Length = 97
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 68/88 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I G L SVDQYLN+KL +IS + KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDIEIKGILKSVDQYLNLKLDNISCVNESKYPHLQSVKNL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
FIRGS VRYV + + VD LLQDA+R+
Sbjct: 61 FIRGSTVRYVHMNSNSVDCTLLQDASRR 88
>gi|383174491|gb|AFG70702.1| Pinus taeda anonymous locus 0_14454_01 genomic sequence
Length = 71
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 61/70 (87%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+ +FK LVGK+V VELKND++I GTLHSVDQYLNIKL + V + DKYPHMLSVKNC
Sbjct: 1 MLFFLYFKELVGKEVTVELKNDLAIKGTLHSVDQYLNIKLENTRVVEQDKYPHMLSVKNC 60
Query: 64 FIRGSVVRYV 73
FIRGSVVRYV
Sbjct: 61 FIRGSVVRYV 70
>gi|383174485|gb|AFG70696.1| Pinus taeda anonymous locus 0_14454_01 genomic sequence
gi|383174486|gb|AFG70697.1| Pinus taeda anonymous locus 0_14454_01 genomic sequence
gi|383174487|gb|AFG70698.1| Pinus taeda anonymous locus 0_14454_01 genomic sequence
gi|383174488|gb|AFG70699.1| Pinus taeda anonymous locus 0_14454_01 genomic sequence
gi|383174489|gb|AFG70700.1| Pinus taeda anonymous locus 0_14454_01 genomic sequence
gi|383174490|gb|AFG70701.1| Pinus taeda anonymous locus 0_14454_01 genomic sequence
gi|383174492|gb|AFG70703.1| Pinus taeda anonymous locus 0_14454_01 genomic sequence
gi|383174493|gb|AFG70704.1| Pinus taeda anonymous locus 0_14454_01 genomic sequence
gi|383174494|gb|AFG70705.1| Pinus taeda anonymous locus 0_14454_01 genomic sequence
Length = 71
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 61/70 (87%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+ +FK LVGK+V VELKND++I GTLHSVDQYLNIKL + V + DKYPHMLSVKNC
Sbjct: 1 MLFFLYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVEQDKYPHMLSVKNC 60
Query: 64 FIRGSVVRYV 73
FIRGSVVRYV
Sbjct: 61 FIRGSVVRYV 70
>gi|71002350|ref|XP_755856.1| small nuclear ribonucleoprotein (LSM2) [Aspergillus fumigatus
Af293]
gi|119481913|ref|XP_001260985.1| small nuclear ribonucleoprotein (LSM2), putative [Neosartorya
fischeri NRRL 181]
gi|66853494|gb|EAL93818.1| small nuclear ribonucleoprotein (LSM2), putative [Aspergillus
fumigatus Af293]
gi|119409139|gb|EAW19088.1| small nuclear ribonucleoprotein (LSM2), putative [Neosartorya
fischeri NRRL 181]
gi|159129913|gb|EDP55027.1| small nuclear ribonucleoprotein (LSM2), putative [Aspergillus
fumigatus A1163]
Length = 91
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 70/88 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L + V +ELKND+ I GTL SVDQYLNIKL D+ V D DKYPH+ SVKN
Sbjct: 1 MLFFSFFKTLTNQTVTIELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLDKYPHLSSVKNM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
FIRGSVVRYV LP EVD LL+DATR+
Sbjct: 61 FIRGSVVRYVMLPRSEVDVGLLEDATRR 88
>gi|429849698|gb|ELA25053.1| small nuclear ribonucleoprotein lsm2 [Colletotrichum
gloeosporioides Nara gc5]
Length = 132
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 74/124 (59%), Gaps = 34/124 (27%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHML----- 58
+LF+SFFK+L+ +V VELKND+ I GTL SVDQYLNIKL DISV + KYPH++
Sbjct: 1 MLFFSFFKTLIDHEVTVELKNDIQIRGTLKSVDQYLNIKLDDISVVEELKYPHLVSHPLW 60
Query: 59 -----------------------------SVKNCFIRGSVVRYVQLPGDEVDTQLLQDAT 89
SVKN FIRGSVVRYV LP + VD LL+DAT
Sbjct: 61 PLLSLGLVFSLSVMLPDDRPPPANIDSQSSVKNVFIRGSVVRYVHLPANHVDVPLLEDAT 120
Query: 90 RKEA 93
R+EA
Sbjct: 121 RREA 124
>gi|164424298|ref|XP_958875.2| hypothetical protein NCU07382 [Neurospora crassa OR74A]
gi|157070456|gb|EAA29639.2| hypothetical protein NCU07382 [Neurospora crassa OR74A]
Length = 108
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 66/84 (78%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
SFFK+L+ +V VELKND+ I G L SVDQ+LNIKL +I V + KYPH+ +VKN FIRG
Sbjct: 7 SFFKTLIDHEVTVELKNDIQIRGVLKSVDQFLNIKLDNIQVVEELKYPHLSAVKNVFIRG 66
Query: 68 SVVRYVQLPGDEVDTQLLQDATRK 91
SVVRYV LP + VD QLL+DATR+
Sbjct: 67 SVVRYVHLPQESVDIQLLEDATRR 90
>gi|241958540|ref|XP_002421989.1| RNA processing complex subunit, putative; U6 snRNA-associated
protein, putative [Candida dubliniensis CD36]
gi|223645334|emb|CAX39990.1| RNA processing complex subunit, putative [Candida dubliniensis
CD36]
gi|238879887|gb|EEQ43525.1| hypothetical protein CAWG_01763 [Candida albicans WO-1]
Length = 96
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 73/91 (80%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I GTL SVDQ+LN+KL +I+ T+ +YP++ +VKN
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDIEIKGTLKSVDQFLNLKLDNITCTNGQRYPYLGAVKNL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
FIRGS VRYV + + VD LLQDA+R+EA+
Sbjct: 61 FIRGSNVRYVHMNPNSVDCTLLQDASRREAM 91
>gi|209879656|ref|XP_002141268.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209556874|gb|EEA06919.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 120
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 74/99 (74%), Gaps = 4/99 (4%)
Query: 4 LLFYSFFKSLVGKDVVV--ELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
+LF++F ++L+ K +VV ELKND+ I GTLHS+DQYLNIKL +ISV ++Y HM S+K
Sbjct: 17 VLFFNFLQTLIDKSIVVTVELKNDLQITGTLHSIDQYLNIKLNEISVNQNEQYVHMNSLK 76
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKE--AVNATR 98
NCFIRGSVVRY+ P VD LLQ++ RKE A+ T+
Sbjct: 77 NCFIRGSVVRYIFFPPSLVDIGLLQESCRKEIKAIQETK 115
>gi|126140352|ref|XP_001386698.1| snRNA-associated protein, Sm class [Scheffersomyces stipitis CBS
6054]
gi|126093982|gb|ABN68669.1| snRNA-associated protein, Sm class [Scheffersomyces stipitis CBS
6054]
Length = 94
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 68/88 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I GTL SVDQYLN+KL +IS + YPH+ SVKN
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDIEIKGTLKSVDQYLNLKLDNISCVNGTNYPHLHSVKNL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
FIRGS VRYV + + VD LLQDA+R+
Sbjct: 61 FIRGSTVRYVHMSPNSVDCTLLQDASRR 88
>gi|367010550|ref|XP_003679776.1| hypothetical protein TDEL_0B04360 [Torulaspora delbrueckii]
gi|359747434|emb|CCE90565.1| hypothetical protein TDEL_0B04360 [Torulaspora delbrueckii]
Length = 93
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V LKND+ + GTL SVDQ+LN+KL +IS ++ KYPH+ SV+N
Sbjct: 1 MLFFSFFKTLVDQEVT--LKNDIELKGTLKSVDQFLNLKLDNISCSNESKYPHLTSVRNI 58
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
FIRGS VRYV L + VDT LLQDA R+EA+
Sbjct: 59 FIRGSTVRYVYLNKNMVDTNLLQDAARREAM 89
>gi|389584132|dbj|GAB66865.1| U6 snRNA-associated Sm-like protein LSm4 [Plasmodium cynomolgi
strain B]
Length = 95
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 61/76 (80%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPG 77
V VELKND+ I G LHSVDQYLNIKLT+++V P+KYPH+LS+K+CF+RGSVVRYV LP
Sbjct: 9 VTVELKNDLQISGVLHSVDQYLNIKLTNVTVNHPEKYPHLLSIKSCFVRGSVVRYVFLPS 68
Query: 78 DEVDTQLLQDATRKEA 93
E+D + L RKEA
Sbjct: 69 KEIDVEKLHHMCRKEA 84
>gi|402073708|gb|EJT69260.1| U6 snRNA-associated Sm-like protein LSm2 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 103
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 66/84 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ ++ VELKN + I GTL SVDQYLN+KL +ISV + KYPH+ +VKN
Sbjct: 1 MLFFSFFKTLIDVEITVELKNSIQIRGTLKSVDQYLNLKLENISVVEDVKYPHLSAVKNV 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQD 87
FIRGSVVRY+ LPG VD LL+D
Sbjct: 61 FIRGSVVRYIHLPGAHVDVPLLED 84
>gi|448079672|ref|XP_004194435.1| Piso0_004929 [Millerozyma farinosa CBS 7064]
gi|359375857|emb|CCE86439.1| Piso0_004929 [Millerozyma farinosa CBS 7064]
Length = 124
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 68/88 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I GTL SVDQYLN+KL +IS + KYPH+ ++KN
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDIEIKGTLKSVDQYLNLKLDNISGINETKYPHLSAIKNL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
FIRGS VRYV + VD LLQDA+R+
Sbjct: 61 FIRGSTVRYVHMDPRSVDCTLLQDASRR 88
>gi|383174495|gb|AFG70706.1| Pinus taeda anonymous locus 0_14454_01 genomic sequence
Length = 71
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/70 (74%), Positives = 60/70 (85%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+ +FK LVGK+V VELKND++I GTLHSVDQYLNIKL + V + DKYPHMLS KNC
Sbjct: 1 MLFFLYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLDNTRVVEQDKYPHMLSAKNC 60
Query: 64 FIRGSVVRYV 73
FIRGSVVRYV
Sbjct: 61 FIRGSVVRYV 70
>gi|149239064|ref|XP_001525408.1| hypothetical protein LELG_03336 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450901|gb|EDK45157.1| hypothetical protein LELG_03336 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 96
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 71/91 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I G L SVDQ+LN+KL +I + DKYP++ +VKN
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDMEITGVLKSVDQFLNLKLDNIKCNNGDKYPYLEAVKNL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
FIRGS VRYV + + VD LLQDA+R+EA+
Sbjct: 61 FIRGSTVRYVHINPNLVDCTLLQDASRREAM 91
>gi|347838545|emb|CCD53117.1| hypothetical protein [Botryotinia fuckeliana]
Length = 565
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 54/77 (70%), Positives = 61/77 (79%)
Query: 17 DVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLP 76
+V VELKND+ I G L SVDQYLNIKL DI V + KYPH+ SVKN FIRGSVVRYV LP
Sbjct: 481 EVTVELKNDIQIKGILKSVDQYLNIKLDDIQVVEELKYPHLSSVKNVFIRGSVVRYVHLP 540
Query: 77 GDEVDTQLLQDATRKEA 93
G +DT LL+DATR+EA
Sbjct: 541 GGVIDTALLEDATRREA 557
>gi|361067211|gb|AEW07917.1| Pinus taeda anonymous locus 0_14454_01 genomic sequence
Length = 71
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/70 (74%), Positives = 60/70 (85%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+ +FK LVGK+V V LKND++I GTLHSVDQYLNIKL + V + DKYPHMLSVKNC
Sbjct: 1 MLFFLYFKELVGKEVTVALKNDLAIRGTLHSVDQYLNIKLENTRVVEQDKYPHMLSVKNC 60
Query: 64 FIRGSVVRYV 73
FIRGSVVRYV
Sbjct: 61 FIRGSVVRYV 70
>gi|383174496|gb|AFG70707.1| Pinus taeda anonymous locus 0_14454_01 genomic sequence
Length = 71
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/70 (74%), Positives = 61/70 (87%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+ +FK LVGK+V+VELKND++I GTLHSVDQYLNIKL + V + DKYPHMLSVK C
Sbjct: 1 MLFFLYFKELVGKEVIVELKNDLAIRGTLHSVDQYLNIKLENTRVVEQDKYPHMLSVKIC 60
Query: 64 FIRGSVVRYV 73
FIRGSVVRYV
Sbjct: 61 FIRGSVVRYV 70
>gi|429329401|gb|AFZ81160.1| LSM domain-containing protein [Babesia equi]
Length = 170
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 74/92 (80%), Gaps = 2/92 (2%)
Query: 5 LFYSFFKSLVGKD--VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
LF++FF++LV K+ V +ELKND+ I G LH+VDQYLNIKL++++ +D ++YPH+LSV N
Sbjct: 72 LFFNFFQTLVEKNAKVTIELKNDLQISGKLHAVDQYLNIKLSNVTASDTERYPHLLSVMN 131
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
CF+RGSVVRYV ++++T+ LQ+ R+E +
Sbjct: 132 CFVRGSVVRYVFFNPEDINTEELQELCRREVM 163
>gi|239608423|gb|EEQ85410.1| small nuclear ribonucleoprotein LSM2 [Ajellomyces dermatitidis
ER-3]
Length = 116
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 62/78 (79%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPG 77
V +ELKND+ I GTL SVDQYLNIKL DI V D D+YPH+ SVKN F+RGSVVRY+ LP
Sbjct: 33 VTIELKNDIRIRGTLKSVDQYLNIKLDDIEVLDLDQYPHLSSVKNIFVRGSVVRYIVLPQ 92
Query: 78 DEVDTQLLQDATRKEAVN 95
EVD LL+DATR+EA N
Sbjct: 93 AEVDRGLLEDATRREAAN 110
>gi|344228779|gb|EGV60665.1| U6 snRNA-associated Sm-like protein LSm2 [Candida tenuis ATCC
10573]
Length = 115
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 69/88 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I G L SVDQYLN+KL +IS T+ KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDMEIKGVLKSVDQYLNLKLDNISCTNDVKYPHLNSVKNL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
FIRGS VRY+ L + VD LLQDA+R+
Sbjct: 61 FIRGSTVRYIHLNPNSVDCTLLQDASRR 88
>gi|443896813|dbj|GAC74156.1| predicted snRNP core protein [Pseudozyma antarctica T-34]
Length = 92
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L +S FK+L G+ V +ELKND++I GTL SVDQ ++ +I V D K+PHM++VK+
Sbjct: 1 MLIFSAFKTLTGQQVTIELKNDLAIQGTLKSVDQCID----NIRVLDEAKHPHMMAVKSA 56
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FIRGSVVRYV +P VDTQLL+DATR+EA + +
Sbjct: 57 FIRGSVVRYVHIPAAAVDTQLLEDATRREAASQAK 91
>gi|448084158|ref|XP_004195535.1| Piso0_004929 [Millerozyma farinosa CBS 7064]
gi|359376957|emb|CCE85340.1| Piso0_004929 [Millerozyma farinosa CBS 7064]
Length = 120
Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 68/88 (77%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I GTL SVDQYLN+KL +IS + KYPH+ ++KN
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDIEIKGTLKSVDQYLNLKLDNISGINETKYPHLSAIKNL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
FIRGS VRYV + VD LLQDA+R+
Sbjct: 61 FIRGSTVRYVHMDPRSVDCTLLQDASRR 88
>gi|66362654|ref|XP_628293.1| snRNP core protein [Cryptosporidium parvum Iowa II]
gi|46229862|gb|EAK90680.1| snRNP core protein [Cryptosporidium parvum Iowa II]
Length = 107
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 68/90 (75%), Gaps = 2/90 (2%)
Query: 5 LFYSFFKSLVGKDVVV--ELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
LF++F ++L+ K VVV ELKND+ I GTLHS+DQYLNIKL + +V + + H+ S+KN
Sbjct: 6 LFFNFLQTLIEKQVVVTVELKNDLQITGTLHSIDQYLNIKLNNTTVNQNESFIHLGSLKN 65
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
CFIRGSVVRY+ P EVD +LLQ A RKE
Sbjct: 66 CFIRGSVVRYIFFPPSEVDIELLQKACRKE 95
>gi|294874388|ref|XP_002766931.1| U6 snRNP protein Lsm2, putative [Perkinsus marinus ATCC 50983]
gi|239868306|gb|EEQ99648.1| U6 snRNP protein Lsm2, putative [Perkinsus marinus ATCC 50983]
Length = 103
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 71/91 (78%), Gaps = 4/91 (4%)
Query: 4 LLFYSFFKSLVGKD--VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
+LF+ FF++LV + V VE+KNDV I GTL +VDQY N+KL +IS+ +P++YPH+LS++
Sbjct: 1 MLFFDFFQNLVDSNAQVTVEMKNDVQITGTLPAVDQYFNVKLKNISINNPEQYPHLLSLR 60
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
NCFIRGSVVRYV LP ++ TQ L D RKE
Sbjct: 61 NCFIRGSVVRYVHLP--DMYTQSLTDQCRKE 89
>gi|212544302|ref|XP_002152305.1| small nuclear ribonucleoprotein (LSM2), putative [Talaromyces
marneffei ATCC 18224]
gi|210065274|gb|EEA19368.1| small nuclear ribonucleoprotein (LSM2), putative [Talaromyces
marneffei ATCC 18224]
Length = 103
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 69/88 (78%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L V VELKND+ I GTL SVDQYLNIKL D+ V D DKYPH+ SVKN
Sbjct: 1 MLFFSFFKTLTNHIVTVELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLDKYPHLSSVKNM 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
FIRGSVVRYV LP EVD LL+DATR+
Sbjct: 61 FIRGSVVRYVVLPSAEVDRGLLEDATRR 88
>gi|148694761|gb|EDL26708.1| LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_f [Mus musculus]
Length = 75
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/57 (89%), Positives = 55/57 (96%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHM +
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMFPI 57
>gi|149028024|gb|EDL83475.1| rCG38360, isoform CRA_a [Rattus norvegicus]
Length = 60
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/59 (86%), Positives = 56/59 (94%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPHM + +
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMFPIGD 59
>gi|7861942|gb|AAF70450.1|AF210645_1 Smx5, partial [Danio rerio]
Length = 53
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/53 (96%), Positives = 52/53 (98%)
Query: 31 TLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPGDEVDTQ 83
TLHSVDQYLNIKLTDISVTDP+KYPHMLSVKNCFIRGSVVRYVQLP DEVDTQ
Sbjct: 1 TLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQ 53
>gi|68476979|ref|XP_717467.1| potential RNA processing complex subunit Lsm2 [Candida albicans
SC5314]
gi|68477168|ref|XP_717377.1| potential RNA processing complex subunit Lsm2 [Candida albicans
SC5314]
gi|46439086|gb|EAK98408.1| potential RNA processing complex subunit Lsm2 [Candida albicans
SC5314]
gi|46439180|gb|EAK98501.1| potential RNA processing complex subunit Lsm2 [Candida albicans
SC5314]
Length = 103
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 70/88 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+LV ++V VELKND+ I GTL SVDQ+LN+KL +I+ T+ +YP++ +VKN
Sbjct: 1 MLFFSFFKTLVDQEVTVELKNDIEIKGTLKSVDQFLNLKLDNITCTNGQRYPYLGAVKNL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
FIRGS VRYV + + VD LLQDA+R+
Sbjct: 61 FIRGSNVRYVHMNPNSVDCTLLQDASRR 88
>gi|299751432|ref|XP_002911642.1| small nuclear ribonucleoprotein LSM2 [Coprinopsis cinerea
okayama7#130]
gi|298409372|gb|EFI28148.1| small nuclear ribonucleoprotein LSM2 [Coprinopsis cinerea
okayama7#130]
Length = 73
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 59/71 (83%)
Query: 28 ICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPGDEVDTQLLQD 87
I G L SVDQ+LNI+L +I V+D ++PHM++VKNCFIRGSVVRYVQLP + VDTQLL+D
Sbjct: 2 ITGVLKSVDQFLNIRLDNIKVSDEARHPHMMAVKNCFIRGSVVRYVQLPAEHVDTQLLED 61
Query: 88 ATRKEAVNATR 98
ATR+EA N +
Sbjct: 62 ATRREAANQAK 72
>gi|324021709|ref|NP_001191203.1| U6 snRNA-associated Sm-like protein LSm2 isoform 4 [Mus musculus]
gi|148694759|gb|EDL26706.1| LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_d [Mus musculus]
Length = 74
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/54 (92%), Positives = 53/54 (98%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHM 57
+LFYSFFKSLVGKDVVVELKND+SICGTLHSVDQYLNIKLTDISVTDP+KYPH
Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHF 54
>gi|328354299|emb|CCA40696.1| U6 snRNA-associated Sm-like protein LSm4 [Komagataella pastoris
CBS 7435]
Length = 102
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDIS-VTDPD-KYPHMLSVK 61
+LF+S FK+L + + VE KN+V I GTL SVDQYLN+KL +I ++D D ++PH+ VK
Sbjct: 1 MLFFSLFKTLTDQQITVEFKNNVEITGTLKSVDQYLNLKLDNIQYISDEDNEFPHLFGVK 60
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNAT 97
+ FIRGS +RY+ + VDT LLQDA+R+EA+ ++
Sbjct: 61 SLFIRGSGIRYIHIDPSSVDTNLLQDASRREAMASS 96
>gi|46105464|ref|XP_380536.1| hypothetical protein FG00360.1 [Gibberella zeae PH-1]
Length = 83
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF+SFFK+L+ +V VELKND+ + G L SVDQYLNIKL DI V + KYPH+ SVKN
Sbjct: 1 MLFFSFFKTLIDHEVTVELKNDIQLKGILKSVDQYLNIKLDDIQVVEELKYPHLSSVKNV 60
Query: 64 FIRGSVVRYVQLP 76
FIRGSVVRYV LP
Sbjct: 61 FIRGSVVRYVHLP 73
>gi|390358916|ref|XP_003729363.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2-like
[Strongylocentrotus purpuratus]
Length = 83
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 53/56 (94%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLS 59
+LFYSFFKSLVGKDV+VELKND+SI GTLHSVDQ+LNIKLTDISVTD ++YPHM S
Sbjct: 5 MLFYSFFKSLVGKDVIVELKNDLSIGGTLHSVDQFLNIKLTDISVTDQERYPHMES 60
>gi|294881769|ref|XP_002769488.1| U6 snRNP protein Lsm2, putative [Perkinsus marinus ATCC 50983]
gi|239872947|gb|EER02206.1| U6 snRNP protein Lsm2, putative [Perkinsus marinus ATCC 50983]
Length = 83
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 58/70 (82%), Gaps = 2/70 (2%)
Query: 4 LLFYSFFKSLVGKD--VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
+LF+ FF++LV + V VE+KNDV I GTL +VDQY N+KL +IS+ +P++YPH+LS++
Sbjct: 1 MLFFDFFQNLVDSNAQVTVEMKNDVQITGTLQAVDQYFNVKLKNISINNPEQYPHLLSLR 60
Query: 62 NCFIRGSVVR 71
NCFIRGSVVR
Sbjct: 61 NCFIRGSVVR 70
>gi|403373349|gb|EJY86592.1| U6 snRNA-associated Sm-like protein LSm4, putative [Oxytricha
trifallax]
Length = 99
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Query: 5 LFYSFFKSLVGKD--VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
+F SFF+ L K+ V +ELKND+ I GTL SVD+ LNI+LT++ + D P++LS KN
Sbjct: 1 MFQSFFRQLADKNQRVTLELKNDLKIQGTLVSVDESLNIQLTNMKIADEINNPYLLSCKN 60
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
FIRG+V+RYV L EVDT+ L +A +KEA
Sbjct: 61 GFIRGNVIRYVHLSKKEVDTEPLTEACKKEA 91
>gi|440294352|gb|ELP87369.1| hypothetical protein EIN_096260 [Entamoeba invadens IP1]
Length = 95
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFYSFFK+L+GK+V VELKND I G L +VDQ LN+K+ D +D +P ++ NC
Sbjct: 1 MLFYSFFKTLIGKEVTVELKNDAIITGKLLAVDQLLNVKM-DTLKSDNALFPQFQTLTNC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
FIRG+ +RY+ + +D QLL DAT E
Sbjct: 60 FIRGNTIRYISMSESLIDIQLLHDATLLE 88
>gi|392921513|ref|NP_001256512.1| Protein GUT-2, isoform b [Caenorhabditis elegans]
gi|306438324|emb|CBW48439.1| Protein GUT-2, isoform b [Caenorhabditis elegans]
Length = 60
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 52/56 (92%)
Query: 41 IKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
+KLTDI+V+DP+++PHM+SVKNCFIRGSVVRYVQLP D+VDTQLL D+ RKE +++
Sbjct: 1 MKLTDITVSDPERFPHMVSVKNCFIRGSVVRYVQLPSDQVDTQLLADSCRKELLDS 56
>gi|449015531|dbj|BAM78933.1| snRNP core Sm-like protein SmX5 [Cyanidioschyzon merolae strain
10D]
Length = 101
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHM-LSVKN 62
+ F + ++L+G+D+ VELKND+SI G L +VDQYLN++L + V P + L +
Sbjct: 1 MFFTAILRTLIGEDITVELKNDLSIRGRLEAVDQYLNVRLAQVQVHTAAAPPVLQLLHGS 60
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
C +RGS +RY+ LP ++VDT+LLQ+ATR+ A
Sbjct: 61 CTVRGSCIRYIHLPVEKVDTELLQEATRRVA 91
>gi|254573542|ref|XP_002493880.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
gi|238033679|emb|CAY71701.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
Length = 101
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 65/94 (69%), Gaps = 6/94 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDIS-VTDPD-KYPHMLSVK 61
+LF+S FK+L + + KN+V I GTL SVDQYLN+KL +I ++D D ++PH+ VK
Sbjct: 1 MLFFSLFKTLTDQ----QFKNNVEITGTLKSVDQYLNLKLDNIQYISDEDNEFPHLFGVK 56
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
+ FIRGS +RY+ + VDT LLQDA+R+ N
Sbjct: 57 SLFIRGSGIRYIHIDPSSVDTNLLQDASRRGMSN 90
>gi|84996507|ref|XP_952975.1| U6 snRNP protein Lsm2 [Theileria annulata strain Ankara]
gi|65303972|emb|CAI76351.1| U6 snRNP protein Lsm2, putative [Theileria annulata]
Length = 112
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 56/77 (72%), Gaps = 5/77 (6%)
Query: 23 KNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHM-----LSVKNCFIRGSVVRYVQLPG 77
+ND+ I G LHSVDQYLNIKLT+++ D +YPH+ LSV NCF+RGSVVRYV
Sbjct: 28 RNDLQISGKLHSVDQYLNIKLTNVTANDTQRYPHLVLIYKLSVVNCFVRGSVVRYVFFNP 87
Query: 78 DEVDTQLLQDATRKEAV 94
+++T+ LQ+ R++A+
Sbjct: 88 SDINTEELQELCRRQAM 104
>gi|399219015|emb|CCF75902.1| unnamed protein product [Babesia microti strain RI]
Length = 125
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 57/91 (62%), Gaps = 18/91 (19%)
Query: 5 LFYSFFKSLVGKD--VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
F++FF++LV K+ V VELKND+ I GTLHSVDQYLNIKL +KN
Sbjct: 48 FFFNFFQTLVEKNAQVTVELKNDLEITGTLHSVDQYLNIKL----------------IKN 91
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
CFIRGSVVRYV + ++D LQD RK
Sbjct: 92 CFIRGSVVRYVYINKKDIDFDELQDLCRKST 122
>gi|307200581|gb|EFN80722.1| U6 snRNA-associated Sm-like protein LSm2 [Harpegnathos saltator]
Length = 42
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/42 (90%), Positives = 38/42 (90%)
Query: 57 MLSVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
MLSVKNCFIRGSVVRYVQLPGDEVDTQLLQDA RKEA TR
Sbjct: 1 MLSVKNCFIRGSVVRYVQLPGDEVDTQLLQDAARKEAAVQTR 42
>gi|123433684|ref|XP_001308656.1| Sm protein [Trichomonas vaginalis G3]
gi|121890347|gb|EAX95726.1| Sm protein [Trichomonas vaginalis G3]
Length = 94
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LF F++L GK + V +KN + I GTL S+D + NIKL + D + ++
Sbjct: 1 MLFLHVFRTLQGKRITVHVKNGIVIEGTLQSIDHFYNIKLINTETKDAGNLNMVSTLSTA 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
+IRG+ V Y++LP DE+D +L DATR++
Sbjct: 61 YIRGTSVLYIELPKDEIDLNILHDATRRQ 89
>gi|145533499|ref|XP_001452494.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420193|emb|CAK85097.1| unnamed protein product [Paramecium tetraurelia]
Length = 100
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 1 MERLLFYSFFKSLVGK--DVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHML 58
M+ F ++F+ L+ + V +ELKN + I G + VD LN L D V+DP K P ++
Sbjct: 1 MQSQFFQTYFRGLIERCVSVTIELKNGLQIQGQITYVDDNLNFNLVDPEVSDPVKQPQLI 60
Query: 59 SVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
++KN FIRGS V+YV +P +E+ ++L A + E
Sbjct: 61 TLKNSFIRGSTVKYVHIPQEELQEEVLISACKNE 94
>gi|67901204|ref|XP_680858.1| hypothetical protein AN7589.2 [Aspergillus nidulans FGSC A4]
gi|40742979|gb|EAA62169.1| hypothetical protein AN7589.2 [Aspergillus nidulans FGSC A4]
Length = 2412
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 50/64 (78%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
+ F++L + V +ELKND+ I GTL SVDQYLNIKL DI V D DKYPH+ SVKN FIRG
Sbjct: 1000 ALFQTLTNQVVTIELKNDIRIRGTLKSVDQYLNIKLDDIDVLDLDKYPHLSSVKNMFIRG 1059
Query: 68 SVVR 71
SVVR
Sbjct: 1060 SVVR 1063
>gi|145513718|ref|XP_001442770.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410123|emb|CAK75373.1| unnamed protein product [Paramecium tetraurelia]
Length = 100
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 1 MERLLFYSFFKSLVGK--DVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHML 58
M+ F ++F+ L+ + V +ELKN + I G + VD LN L D V+DP K P ++
Sbjct: 1 MQSQFFQTYFRGLIERCVSVTIELKNGLQIQGQITYVDDNLNFNLVDPEVSDPLKQPQLM 60
Query: 59 SVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
+++N FIRGS V+YV +P +E+ ++L A + E
Sbjct: 61 TLRNSFIRGSTVKYVHIPQEELQEEVLISACKNE 94
>gi|149392340|gb|ABR25995.1| snrnp core sm protein sm-x5-like protein [Oryza sativa Indica
Group]
Length = 53
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 38/46 (82%)
Query: 48 VTDPDKYPHMLSVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
V D DKYPHMLSV+NCFIRGSVVRYV LP D VD +L DATR+EA
Sbjct: 5 VVDQDKYPHMLSVRNCFIRGSVVRYVLLPQDGVDIDILHDATRREA 50
>gi|429966489|gb|ELA48486.1| hypothetical protein VCUG_00095 [Vavraia culicis 'floridensis']
Length = 108
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
++FY FK + K++ VELKN + I G L S D +LNIKL+D+++ D + + + V
Sbjct: 1 MIFYMLFKKNINKNITVELKNGLVISGKLLSCDVFLNIKLSDVAIEDLENFKGLSGVATL 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATR 90
IRGS V+Y++L DE L D TR
Sbjct: 61 SIRGSCVKYIKLEKDENSIASLLDTTR 87
>gi|440494118|gb|ELQ76529.1| putative snRNP core protein [Trachipleistophora hominis]
Length = 119
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
++FY FF+ + K+++VELKN + I G L S D +LNIKL D++V D + Y + V
Sbjct: 12 MIFYMFFQKNINKNIIVELKNGLVISGKLLSCDIFLNIKLCDVTVKDLENYRGLSGVSTL 71
Query: 64 FIRGSVVRYVQLPGDE-VDTQLLQDATRKEAVNATR 98
+RGS V+YV+L DE + LL+ + VN R
Sbjct: 72 SVRGSCVKYVKLEKDEDLIASLLETTRNRFIVNEIR 107
>gi|300123308|emb|CBK24581.2| unnamed protein product [Blastocystis hominis]
Length = 140
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 17/98 (17%)
Query: 5 LFYSFFKSLVGKDVVV--ELKNDVSICGT---------------LHSVDQYLNIKLTDIS 47
+F S F L G VV ELKNDV + GT + SVDQ+LN KL ++
Sbjct: 5 IFLSLFNVLKGNRAVVTIELKNDVQLRGTYPFALLSSFLSFICSIDSVDQFLNFKLGNVE 64
Query: 48 VTDPDKYPHMLSVKNCFIRGSVVRYVQLPGDEVDTQLL 85
V + D++PH++ + +CF+RGSV+RY+ L +++ LL
Sbjct: 65 VVNKDRFPHLIPMTSCFVRGSVIRYIHLTKADINEDLL 102
>gi|402467766|gb|EJW03016.1| hypothetical protein EDEG_02598 [Edhazardia aedis USNM 41457]
Length = 97
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHM--LSVK 61
+LFYS+F + +G + +ELKND+ I G L SVD +LN KLTDI D + M +K
Sbjct: 1 MLFYSYFATKIGNKIEIELKNDLVIRGILLSVDTFLNFKLTDIEKIDAKRGWEMGLGDLK 60
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
C IRGS V++ ++ + D + L++A+R A
Sbjct: 61 TCSIRGSCVKFARIGYEIDDLKRLEEASRYRA 92
>gi|452821896|gb|EME28921.1| U6 snRNA-associated Sm-like protein LSm2 [Galdieria sulphuraria]
Length = 84
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLS 59
+LF+SFFK+ +GK V VELKNDV I G +HSVDQYLNIKL DI + + + P ++
Sbjct: 1 MLFFSFFKTFIGKTVTVELKNDVIIRGKVHSVDQYLNIKLEDIEILNVETCPQLVG 56
>gi|71019431|ref|XP_759946.1| hypothetical protein UM03799.1 [Ustilago maydis 521]
gi|46099492|gb|EAK84725.1| hypothetical protein UM03799.1 [Ustilago maydis 521]
Length = 171
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 30/90 (33%)
Query: 36 DQYLNIKLTDISVTDPDKYPHMLS------------------------------VKNCFI 65
D++LN K+ +I V D K+PHM+S VK+ FI
Sbjct: 78 DRFLNFKIDNIRVLDEAKHPHMVSLVTSPMRTLCWIAARTNCSSPSSLLSAQMAVKSAFI 137
Query: 66 RGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
RGSVVRYV +P VDTQLL+DATR+EA +
Sbjct: 138 RGSVVRYVHIPAAAVDTQLLEDATRREAAS 167
>gi|358331639|dbj|GAA50416.1| U6 snRNA-associated Sm-like protein LSm2 [Clonorchis sinensis]
Length = 343
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 49/73 (67%), Gaps = 12/73 (16%)
Query: 21 ELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPGDEV 80
++KNDV+ + VD L+IK T +V LSVKNCFIRGS+VRYVQLP DE
Sbjct: 275 QIKNDVTT-AVVEDVD--LHIKRTFWTV---------LSVKNCFIRGSIVRYVQLPADEC 322
Query: 81 DTQLLQDATRKEA 93
DT LQ+A+RKEA
Sbjct: 323 DTVELQNASRKEA 335
>gi|378755973|gb|EHY65998.1| hypothetical protein NERG_00694 [Nematocida sp. 1 ERTm2]
Length = 94
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
++ + FK+L+ K V +ELKN + I G L +D + N KL D TD P L N
Sbjct: 1 MVMTTLFKTLINKRVRIELKNSLKITGLLEDIDTFFNFKLRD---TDKIDIP-FLRNNNI 56
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
FIRGS ++ + + D+V+ + L+DATRK
Sbjct: 57 FIRGSAIKEIWMSEDDVNVKRLEDATRK 84
>gi|226486682|emb|CAX74418.1| U6 snRNA-associated Sm-like protein LSm2 [Schistosoma japonicum]
Length = 45
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 57 MLSVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
MLSVKNCFIRGS+VRYVQLP DE DT LQ+A+RKEA
Sbjct: 1 MLSVKNCFIRGSIVRYVQLPADECDTIELQNASRKEA 37
>gi|169806072|ref|XP_001827781.1| U6 snRNA-associated Sm-like protein LSm2 [Enterocytozoon bieneusi
H348]
gi|263432000|sp|A9CTE0.1|LSM2_ENTBH RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm2
gi|161779067|gb|EDQ31093.1| U6 snRNA-associated Sm-like protein LSm2 [Enterocytozoon bieneusi
H348]
Length = 97
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKY----PHMLS 59
+LF+ +FKS + +++V LKND+SI G L +VD +LNIK+ ++ +++ + +
Sbjct: 1 MLFFEYFKSQLNNEIIVNLKNDISISGILKNVDPFLNIKIENVIAISTNEFIKINKSITN 60
Query: 60 VKNCFIRGSVVRYVQLPGDEVDTQLLQDATR 90
++ C IRGS ++ V+L + ++ +++ ATR
Sbjct: 61 IQLCSIRGSAIKSVELKKNGLEEHMVE-ATR 90
>gi|118482885|gb|ABK93357.1| unknown [Populus trichocarpa]
Length = 54
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 52 DKYPHMLSVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
D+ LSV+NCFIRGSVVRYVQLP + VD LL DATR+EA
Sbjct: 10 DRSDAQLSVRNCFIRGSVVRYVQLPPEGVDVDLLHDATRREA 51
>gi|291231092|ref|XP_002735494.1| PREDICTED: LSM10, U7 small nuclear RNA associated-like
[Saccoglossus kowalevskii]
Length = 114
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 12/95 (12%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
++L GK V+EL+N+ ++ G + SVD Y+N+ ++D+ + D +LS N F++G
Sbjct: 17 LLQALTGKSTVIELRNESTVTGVIDSVDAYMNVFMSDVEFVNADGQVMILS--NFFVQGK 74
Query: 69 VVRYVQLPGDEVD---------TQLLQDATRKEAV 94
++R+VQ+P DEV+ + + TRKE V
Sbjct: 75 MIRFVQIP-DEVNIVTAIKSQLSSWQERRTRKERV 108
>gi|401828689|ref|XP_003888058.1| small nuclear ribonucleoprotein [Encephalitozoon hellem ATCC
50504]
gi|392999132|gb|AFM99077.1| small nuclear ribonucleoprotein [Encephalitozoon hellem ATCC
50504]
Length = 94
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFY FF+S +GK + V LK V + G L ++D YLN+ L ++++ +P + S+ C
Sbjct: 1 MLFYEFFRSNIGKRIFVMLKAGVYVSGVLSNIDPYLNLSLLEVNIL--SNHPGLDSISVC 58
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
IRGS ++YV + D Q + +R +
Sbjct: 59 SIRGSSIKYVLVDKDSTLLQGVNAGSRLRMI 89
>gi|195637574|gb|ACG38255.1| hypothetical protein [Zea mays]
Length = 40
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 31/37 (83%)
Query: 57 MLSVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
MLSV+NCFIRGSVVRYV LP D VD +L DATR+EA
Sbjct: 1 MLSVRNCFIRGSVVRYVLLPQDGVDIDILHDATRREA 37
>gi|85014477|ref|XP_955734.1| U6 snRNA-associated ribonucleoprotein [Encephalitozoon cuniculi
GB-M1]
gi|74644145|sp|Q8SQK1.1|LSM2_ENCCU RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm2
gi|19171428|emb|CAD27153.1| U6 snRNA-ASSOCIATED RIBONUCLEOPROTEIN [Encephalitozoon cuniculi
GB-M1]
gi|449330080|gb|AGE96345.1| U6 snRNA-associated ribonucleoprotein [Encephalitozoon cuniculi]
Length = 94
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFY FF+S +G V V LK V + G L +D YLN+ L D+ + +P + S+ C
Sbjct: 1 MLFYEFFRSSIGSRVSVMLKAGVYVSGRLGGIDPYLNLSLLDVRIL--SSHPGLSSISVC 58
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQ 86
IRGS ++Y+ + + D +LLQ
Sbjct: 59 SIRGSSIKYILV---DKDAKLLQ 78
>gi|396082187|gb|AFN83798.1| U6 snRNA-associated ribonucleoprotein [Encephalitozoon romaleae
SJ-2008]
Length = 94
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFY FF+S +GK + V LK V + G L+S+D YLN+ L + + +P + S+ C
Sbjct: 1 MLFYEFFRSNIGKRIFVMLKAGVYVSGVLNSIDPYLNLNLLKVKIL--SNHPGLDSISLC 58
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQ 86
IRGS ++Y+ + D+ LLQ
Sbjct: 59 SIRGSSIKYIL---ADKDSNLLQ 78
>gi|303390881|ref|XP_003073671.1| U6 snRNA-associated ribonucleoprotein [Encephalitozoon
intestinalis ATCC 50506]
gi|303302818|gb|ADM12311.1| U6 snRNA-associated ribonucleoprotein [Encephalitozoon
intestinalis ATCC 50506]
Length = 94
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+LFY FFKS +GK + V LK V + G L+S+D YLN+ L ++ + +P + C
Sbjct: 1 MLFYEFFKSNIGKRIFVMLKAGVYVSGVLNSIDPYLNLNLEEVEIL--SDHPGLSGTSLC 58
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQ 86
IRGS ++Y+ + D LLQ
Sbjct: 59 SIRGSSIKYIL---ADRDAGLLQ 78
>gi|387594039|gb|EIJ89063.1| hypothetical protein NEQG_00882 [Nematocida parisii ERTm3]
gi|387595758|gb|EIJ93381.1| hypothetical protein NEPG_01723 [Nematocida parisii ERTm1]
Length = 94
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
+ FK+L+ K V +ELK + I G L +D + N KL D T+ P L+ N FIRG
Sbjct: 5 TLFKTLINKRVRIELKTALQITGVLEDIDTFFNFKLKD---TEKINIP-FLTKNNVFIRG 60
Query: 68 SVVRYVQLPGDEVDTQLLQDATRK 91
S ++ + + + V+ + L+D TRK
Sbjct: 61 SAIKEIWIDEEYVNVKKLEDTTRK 84
>gi|405123105|gb|AFR97870.1| hypothetical protein CNAG_01666 [Cryptococcus neoformans var.
grubii H99]
Length = 41
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 31/36 (86%)
Query: 58 LSVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
++VKNCFIRGSVVRYV++ VDT LL+DATR+EA
Sbjct: 1 MAVKNCFIRGSVVRYVRMAARSVDTTLLEDATRREA 36
>gi|427783433|gb|JAA57168.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 139
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+SL G+ +EL+N++S+ GT+ SVD ++N+ L+D +V P+ S F++G
Sbjct: 17 MLQSLRGRQTTIELRNELSVWGTVESVDAFMNVDLSDATVVGPNGEETYASF---FVQGR 73
Query: 69 VVRYVQLPGD 78
VRY+ +P D
Sbjct: 74 QVRYIHIPDD 83
>gi|198436639|ref|XP_002128141.1| PREDICTED: similar to GL19160 isoform 1 [Ciona intestinalis]
Length = 127
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S K+ V ++VELKN + G L S D ++NI L ++ T D H + C
Sbjct: 1 MLPLSLLKTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDG-DHFWRMPEC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
+IRGS ++Y+++P DEV + +D+ K
Sbjct: 60 YIRGSTIKYLRIP-DEVIDMVKEDSMSK 86
>gi|313241313|emb|CBY33589.1| unnamed protein product [Oikopleura dioica]
Length = 141
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S K+ V ++VELKN + G L + D ++N++L ++ T D H + C
Sbjct: 1 MLPLSLLKTAVNHPMLVELKNGETYNGHLVNCDNWMNLQLREVICTSRDG-DHFWRMNEC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
++RGS ++Y+++P + +D ++ R +A
Sbjct: 60 YVRGSTIKYLRIPDEVIDMVKEENTARMKAA 90
>gi|313236950|emb|CBY12197.1| unnamed protein product [Oikopleura dioica]
Length = 141
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S K+ V ++VELKN + G L + D ++N++L ++ T D H + C
Sbjct: 1 MLPLSLLKTAVNHPMLVELKNGETYNGHLVNCDNWMNLQLREVICTSRDG-DHFWRMNEC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
++RGS ++Y+++P + +D ++ R +A
Sbjct: 60 YVRGSTIKYLRIPDEVIDMVKEENTARMKAA 90
>gi|260793240|ref|XP_002591620.1| hypothetical protein BRAFLDRAFT_281075 [Branchiostoma floridae]
gi|229276829|gb|EEN47631.1| hypothetical protein BRAFLDRAFT_281075 [Branchiostoma floridae]
Length = 126
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L + D ++NIKL D+ T D D++ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLEACDNWMNIKLRDVICTSRDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
C+IRGS ++Y+++P DEV + +D K+
Sbjct: 58 ECYIRGSTIKYLRIP-DEVIDMVKEDIVSKQ 87
>gi|195146798|ref|XP_002014371.1| GL19160 [Drosophila persimilis]
gi|194106324|gb|EDW28367.1| GL19160 [Drosophila persimilis]
Length = 151
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L D+ T D D++ M
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPE-- 58
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRGS ++Y+++P DEV + +DA K
Sbjct: 59 -CYIRGSTIKYLRIP-DEVIDMVKEDAQSK 86
>gi|78706862|ref|NP_001027236.1| CG17768, isoform A [Drosophila melanogaster]
gi|320544912|ref|NP_001188778.1| CG17768, isoform B [Drosophila melanogaster]
gi|45445082|gb|AAF52938.3| CG17768, isoform A [Drosophila melanogaster]
gi|201065957|gb|ACH92388.1| FI07244p [Drosophila melanogaster]
gi|318068412|gb|ADV37028.1| CG17768, isoform B [Drosophila melanogaster]
Length = 154
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L D+ T D D++ M
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRGS ++Y+++P DEV + +DA K
Sbjct: 58 ECYIRGSTIKYLRIP-DEVIDMVKEDAQAK 86
>gi|326432761|gb|EGD78331.1| hypothetical protein PTSG_09397 [Salpingoeca sp. ATCC 50818]
Length = 115
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S ++ V ++VELKN S G L + D Y+NI L +++T D +K C
Sbjct: 1 MLPLSLIRAAVNHPMLVELKNGESYNGHLVNCDHYMNIILRGVTLTSKDG-DRFWKLKEC 59
Query: 64 FIRGSVVRYVQLPGDEVD 81
+IRGS ++Y++LP + +D
Sbjct: 60 YIRGSTIKYLRLPDEIID 77
>gi|195578187|ref|XP_002078947.1| GD22262 [Drosophila simulans]
gi|194190956|gb|EDX04532.1| GD22262 [Drosophila simulans]
Length = 154
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L D+ T D D++ M
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRGS ++Y+++P DEV + +DA K
Sbjct: 58 ECYIRGSTIKYLRIP-DEVIDMVKEDAQAK 86
>gi|25012547|gb|AAN71375.1| RE35747p [Drosophila melanogaster]
Length = 154
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L D+ T D D++ M
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRGS ++Y+++P DEV + +DA K
Sbjct: 58 ECYIRGSTIKYLRIP-DEVIDMVKEDAQAK 86
>gi|194859892|ref|XP_001969475.1| GG23936 [Drosophila erecta]
gi|190661342|gb|EDV58534.1| GG23936 [Drosophila erecta]
Length = 154
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L D+ T D D++ M
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRGS ++Y+++P DEV + +DA K
Sbjct: 58 ECYIRGSTIKYLRIP-DEVIDMVKEDAQAK 86
>gi|20260282|gb|AAM13039.1| unknown protein [Arabidopsis thaliana]
gi|22136528|gb|AAM91342.1| unknown protein [Arabidopsis thaliana]
Length = 129
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S FK+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLFKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATR 90
C+IRG+ ++Y+++P DEV ++ ++ TR
Sbjct: 58 ECYIRGNTIKYLRVP-DEVIDKVQEEKTR 85
>gi|195051225|ref|XP_001993055.1| GH13613 [Drosophila grimshawi]
gi|193900114|gb|EDV98980.1| GH13613 [Drosophila grimshawi]
Length = 155
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L D+ T D D++ M
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPE-- 58
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRGS ++Y+++P DEV + +DA K
Sbjct: 59 -CYIRGSTIKYLRIP-DEVIDMVKEDAQAK 86
>gi|298715431|emb|CBJ28042.1| Sm-like protein LSm4 [Ectocarpus siliculosus]
Length = 165
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G+ ++VELKN + G L + D ++NIKL D+ T D DK+ M+ V
Sbjct: 1 MLPLSLLKTAQGQPMLVELKNGDTYNGRLDNCDSWMNIKLKDVIFTSRDADKFVKMVEV- 59
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
++RG+ ++YV +P + +D +D ++++
Sbjct: 60 --YVRGNSIKYVTIPEEVLDMVQEEDLSKEK 88
>gi|195434128|ref|XP_002065055.1| GK14878 [Drosophila willistoni]
gi|194161140|gb|EDW76041.1| GK14878 [Drosophila willistoni]
Length = 303
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L D+ T D D++ M
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRGS ++Y+++P DEV + +DA K
Sbjct: 58 ECYIRGSTIKYLRIP-DEVIDMVKEDAQAK 86
>gi|290988841|ref|XP_002677099.1| predicted protein [Naegleria gruberi]
gi|284090705|gb|EFC44355.1| predicted protein [Naegleria gruberi]
Length = 118
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L G+ V +ELKN I GT+ VD +N L + +T K P L +++ +RGS
Sbjct: 2 FLMKLSGESVTIELKNGTVIAGTIVGVDMSMNTHLKAVKMTLKGKNP--LPLEHMSVRGS 59
Query: 69 VVRYVQLPGDEVDTQLLQDAT 89
+RYV LP LLQD T
Sbjct: 60 NIRYVILPETINLDNLLQDTT 80
>gi|38047763|gb|AAR09784.1| similar to Drosophila melanogaster CG17768, partial [Drosophila
yakuba]
Length = 152
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S K+ ++VELKN + G L S D ++NI L D+ T D D++ M C+I
Sbjct: 3 SLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPE---CYI 59
Query: 66 RGSVVRYVQLPGDEVDTQLLQDATRK 91
RGS ++Y+++P DEV + +DA K
Sbjct: 60 RGSTIKYLRIP-DEVIDMVKEDAQAK 84
>gi|195384890|ref|XP_002051145.1| GJ13818 [Drosophila virilis]
gi|194147602|gb|EDW63300.1| GJ13818 [Drosophila virilis]
Length = 140
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELKN + G L S D ++NI L D+ T D D++ M CFIRGS ++Y+++
Sbjct: 1 MLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPE---CFIRGSTIKYLRI 57
Query: 76 PGDEVDTQLLQDATRK 91
P DEV + +DA K
Sbjct: 58 P-DEVIDMVKEDAQAK 72
>gi|303279759|ref|XP_003059172.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459008|gb|EEH56304.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 129
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L S D ++N+ L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVSCDTWMNVHLKEVICTSKDGDRFWRM---A 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
NC++RG+ ++YV +P DEV + ++ RK+
Sbjct: 58 NCYVRGNTIKYVCVP-DEVIGLVEEENLRKK 87
>gi|308804932|ref|XP_003079778.1| glycine rich protein-common tobacco sp|Q43582|LSM4_TOBAC Probable
U6 snRNA-associated Sm-lik (ISS) [Ostreococcus tauri]
gi|116058235|emb|CAL53424.1| glycine rich protein-common tobacco sp|Q43582|LSM4_TOBAC Probable
U6 snRNA-associated Sm-lik (ISS) [Ostreococcus tauri]
Length = 779
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 11/94 (11%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L + K+ G+ ++VELKN + GTL S D ++N+ L ++ T D D++ M +
Sbjct: 659 MLPLTLLKTSCGRPMLVELKNGETYNGTLASCDTWMNVHLKEVICTSKDGDRFWRM---E 715
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
C++RG+ ++YV +P DEV D R+E N
Sbjct: 716 ECYVRGNTIKYVCVP-DEV-----LDKVREEMKN 743
>gi|118790653|ref|XP_318746.3| AGAP009687-PA [Anopheles gambiae str. PEST]
gi|116118049|gb|EAA14138.4| AGAP009687-PA [Anopheles gambiae str. PEST]
Length = 157
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSKDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD--TQLLQDATRKEA 93
C+IRGS ++Y+++P + +D + +Q +R A
Sbjct: 58 ECYIRGSTIKYLRIPDEVIDMVKEDMQSKSRSRA 91
>gi|296089694|emb|CBI39513.3| unnamed protein product [Vitis vinifera]
Length = 162
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 7/94 (7%)
Query: 2 ERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLS 59
+++L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 12 KKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE 71
Query: 60 VKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
C+IRG+ ++Y+++P + +D +Q+ T+ A
Sbjct: 72 ---CYIRGNTIKYLRVPDEVIDK--VQEETKNRA 100
>gi|348558677|ref|XP_003465143.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Cavia
porcellus]
Length = 139
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
C+IRGS ++Y+++P DE+ D ++EAV R
Sbjct: 58 ECYIRGSTIKYLRIP-DEII-----DMVKEEAVAKGR 88
>gi|146411987|ref|XP_001481965.1| hypothetical protein PGUG_05728 [Meyerozyma guilliermondii ATCC
6260]
gi|146393472|gb|EDK41630.1| hypothetical protein PGUG_05728 [Meyerozyma guilliermondii ATCC
6260]
Length = 121
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
M+ + F S G+ + VELKN S+ GTL S +N+ L +I + P + P +L
Sbjct: 1 MKLVRFLMNMPSSTGQPITVELKNGTSVSGTLLSCTPSMNLSLKNIKLVQPHQDPQLLQF 60
Query: 61 KNCFIRGSVVRYVQLPGD 78
N IRG+ +R + LP D
Sbjct: 61 MN--IRGNQIRQIILPDD 76
>gi|157823641|ref|NP_001099543.1| U6 snRNA-associated Sm-like protein LSm4 [Rattus norvegicus]
gi|159032056|ref|NP_056631.2| U6 snRNA-associated Sm-like protein LSm4 [Mus musculus]
gi|12846677|dbj|BAB27261.1| unnamed protein product [Mus musculus]
gi|20073103|gb|AAH26747.1| Lsm4 protein [Mus musculus]
gi|26354156|dbj|BAC40708.1| unnamed protein product [Mus musculus]
gi|74198684|dbj|BAE39816.1| unnamed protein product [Mus musculus]
gi|74228648|dbj|BAE25390.1| unnamed protein product [Mus musculus]
gi|148696910|gb|EDL28857.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Mus musculus]
gi|149036057|gb|EDL90723.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 138
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATR 90
C+IRGS ++Y+++P DE+ + ++A +
Sbjct: 58 ECYIRGSTIKYLRIP-DEIIDMVREEAAK 85
>gi|15241028|ref|NP_198124.1| U6 snRNA-associated Sm-like protein LSm4 [Arabidopsis thaliana]
gi|332006335|gb|AED93718.1| U6 snRNA-associated Sm-like protein LSm4 [Arabidopsis thaliana]
Length = 129
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATR 90
C+IRG+ ++Y+++P DEV ++ ++ TR
Sbjct: 58 ECYIRGNTIKYLRVP-DEVIDKVQEEKTR 85
>gi|21593495|gb|AAM65462.1| glycine rich protein-like [Arabidopsis thaliana]
Length = 129
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATR 90
C+IRG+ ++Y+++P DEV ++ ++ TR
Sbjct: 58 ECYIRGNTIKYLRVP-DEVIDKVQEEKTR 85
>gi|389743937|gb|EIM85121.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 130
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + K ++VELKN + G L + D ++NI L ++ T D VK C
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGENFNGHLVNCDNFMNITLREVYQTSADG-ERFWKVKEC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
+IRGS ++Y+++P +D + +EA + R
Sbjct: 60 YIRGSTIKYIRVPETLLDVVKEEQLRAREAGKSQR 94
>gi|12834762|dbj|BAB23033.1| unnamed protein product [Mus musculus]
Length = 138
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSLDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATR 90
C+IRGS ++Y+++P DE+ + ++A +
Sbjct: 58 ECYIRGSTIKYLRIP-DEIIDMVREEAAK 85
>gi|198470479|ref|XP_002133476.1| GA22792 [Drosophila pseudoobscura pseudoobscura]
gi|198145470|gb|EDY72104.1| GA22792 [Drosophila pseudoobscura pseudoobscura]
Length = 137
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELKN + G L S D ++NI L D+ T D D++ M C+IRGS ++Y+++
Sbjct: 1 MLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPE---CYIRGSTIKYLRI 57
Query: 76 PGDEVDTQLLQDATRK 91
P DEV + +DA K
Sbjct: 58 P-DEVIDMVKEDAQSK 72
>gi|10720074|sp|Q9QXA5.1|LSM4_MOUSE RecName: Full=U6 snRNA-associated Sm-like protein LSm4
gi|6692064|emb|CAB65729.1| Lsm4 protein [Mus musculus]
Length = 137
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATR 90
C+IRGS ++Y+++P DE+ + ++A +
Sbjct: 58 ECYIRGSTIKYLRIP-DEIIDMVREEAAK 85
>gi|157093137|gb|ABV22223.1| small nuclear ribonucleoprotein Sm D1 [Karlodinium micrum]
Length = 112
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + VVVELKN + GT+ VD +N + ++ T K P +S+ + IRG+
Sbjct: 6 FLMKLSNESVVVELKNSTVVAGTITGVDVSMNTHMKNVKFTVKGKPP--VSMDHLTIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
VRYV LP +DT L+ DA R
Sbjct: 64 NVRYVILPDSIPLDTLLVDDAKR 86
>gi|340718599|ref|XP_003397752.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like isoform
1 [Bombus terrestris]
Length = 154
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 2 ERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLS 59
+++L S ++ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 14 KKMLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRM-- 71
Query: 60 VKNCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 72 -PECYIRGSTIKYLRIPDEVID 92
>gi|429962791|gb|ELA42335.1| hypothetical protein VICG_00735 [Vittaforma corneae ATCC 50505]
Length = 92
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
++F +FK + K V + LKN++ I G L++VD +LN+++T + L + C
Sbjct: 1 MIFLEYFKRHLSKTVTIVLKNEMKITGILNNVDHFLNLQVTAAKIEHDGMGLQKLDL--C 58
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDAT 89
IRGS V++V+L +E + + +AT
Sbjct: 59 SIRGSSVKFVELEKNEDLERRVSEAT 84
>gi|355700149|gb|AES01356.1| LSM4-like protein, U6 small nuclear RNA associated [Mustela
putorius furo]
Length = 153
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 16 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 72
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 73 ECYIRGSTIKYLRIPDEIID 92
>gi|291408786|ref|XP_002720696.1| PREDICTED: LSM10, U7 small nuclear RNA associated [Oryctolagus
cuniculus]
Length = 123
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G++ V+L+++ G + +VD ++NI+LT ++ T D++ H + + + F+ G
Sbjct: 20 LLQGLQGRETTVDLRDESVAHGRIDNVDAFMNIRLTKVTYT--DRWGHQVQLDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|390597253|gb|EIN06653.1| Sm-like ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 130
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + K ++VELKN + G L + D ++NI L ++ T D +K C
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGETFNGHLINCDNFMNITLREVYQTSADG-ERFWKLKEC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
+IRGS ++Y+++P +D + +EA + R
Sbjct: 60 YIRGSTIKYLRVPDTLLDAVKEEQTRAREAGRSAR 94
>gi|317135015|gb|ADV03070.1| SmD1 protein [Amphidinium carterae]
Length = 111
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + VVVELKN + GT+ VD +N + +I T K P +++ + IRG+
Sbjct: 6 FLMKLSNESVVVELKNSTVVSGTITGVDVSMNTHMKNIKFTVKGKPP--IAMDHLTIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RYV LP +DT L++D+ R
Sbjct: 64 NIRYVVLPDSIPLDTLLIEDSKR 86
>gi|387016780|gb|AFJ50509.1| u6 snRNA-associated Sm-like protein LSm4-like [Crotalus
adamanteus]
Length = 139
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEIID 77
>gi|301753917|ref|XP_002912773.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like
[Ailuropoda melanoleuca]
Length = 152
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEIID 77
>gi|403218061|emb|CCK72553.1| hypothetical protein KNAG_0K01890 [Kazachstania naganishii CBS
8797]
Length = 122
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+ F K L + V VELKN ++ GT+ +V +N+ L+ ++T P + ++N
Sbjct: 1 MALVQFLKKLRNEQVTVELKNGSTVWGTVEAVSPQMNVTLSRATLTLATTGPSPMVIQNI 60
Query: 64 FIRGSVVRYVQLP 76
+RG+ +R + LP
Sbjct: 61 NVRGNTIRQILLP 73
>gi|340376985|ref|XP_003387011.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like
[Amphimedon queenslandica]
Length = 125
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S K+ ++VELKN + G L S D ++NI+L ++ T D D++ M CFI
Sbjct: 7 SLLKAAQDNPMLVELKNGETYNGHLVSCDNWMNIQLKEVICTSRDGDRFWKM---PECFI 63
Query: 66 RGSVVRYVQLPGDEVDTQLLQDATR 90
RGS+++Y+++P DEV ++ ++A +
Sbjct: 64 RGSMIKYLRIP-DEVIDKVKEEAFK 87
>gi|195339803|ref|XP_002036506.1| GM11687 [Drosophila sechellia]
gi|194130386|gb|EDW52429.1| GM11687 [Drosophila sechellia]
Length = 140
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELKN + G L S D ++NI L D+ T D D++ M C+IRGS ++Y+++
Sbjct: 1 MLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPE---CYIRGSTIKYLRI 57
Query: 76 PGDEVDTQLLQDATRK 91
P DEV + +DA K
Sbjct: 58 P-DEVIDMVKEDAQAK 72
>gi|226372266|gb|ACO51758.1| U6 snRNA-associated Sm-like protein LSm4 [Rana catesbeiana]
Length = 140
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEIID 77
>gi|147902804|ref|NP_001088454.1| LSM4 homolog, U6 small nuclear RNA associated [Xenopus laevis]
gi|54311207|gb|AAH84779.1| LOC495318 protein [Xenopus laevis]
Length = 138
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEIID 77
>gi|45361593|ref|NP_989371.1| LSM4 homolog, U6 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
gi|39849973|gb|AAH64199.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Xenopus (Silurana) tropicalis]
gi|52078460|gb|AAH82491.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Xenopus (Silurana) tropicalis]
Length = 138
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEIID 77
>gi|145347482|ref|XP_001418193.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578422|gb|ABO96486.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 115
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L + K+ G ++VELKN + GTL S D ++N+ L ++ T D D++ M
Sbjct: 1 MLPLTLLKTSCGHPMLVELKNGETYNGTLASCDTWMNVHLKEVICTSKDGDRFWRM---A 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C++RG+ ++YV +P + +D
Sbjct: 58 ECYVRGNTIKYVCVPDEVLD 77
>gi|6912486|ref|NP_036453.1| U6 snRNA-associated Sm-like protein LSm4 isoform 1 [Homo sapiens]
gi|78369240|ref|NP_001030513.1| U6 snRNA-associated Sm-like protein LSm4 [Bos taurus]
gi|160837874|ref|NP_001104275.1| LSM4 homolog, U6 small nuclear RNA associated [Canis lupus
familiaris]
gi|386780610|ref|NP_001247502.1| U6 snRNA-associated Sm-like protein LSm4 [Macaca mulatta]
gi|296233291|ref|XP_002761949.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Callithrix
jacchus]
gi|297704123|ref|XP_002828970.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 1
[Pongo abelii]
gi|338718643|ref|XP_001500651.3| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like [Equus
caballus]
gi|397493881|ref|XP_003817824.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 1
[Pan paniscus]
gi|402904782|ref|XP_003915219.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 1
[Papio anubis]
gi|410950868|ref|XP_003982124.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Felis catus]
gi|426387786|ref|XP_004060343.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 1
[Gorilla gorilla gorilla]
gi|10720082|sp|Q9Y4Z0.1|LSM4_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm4; AltName:
Full=Glycine-rich protein; Short=GRP
gi|109892572|sp|Q3ZBK6.1|LSM4_BOVIN RecName: Full=U6 snRNA-associated Sm-like protein LSm4
gi|5919149|gb|AAD56228.1|AF182290_1 U6 snRNA-associated Sm-like protein LSm4 [Homo sapiens]
gi|6563244|gb|AAF17216.1|AF117235_1 glycine-rich protein [Homo sapiens]
gi|9623197|gb|AAF90055.1|AF251218_1 LSm4 autoantigen [Homo sapiens]
gi|5262858|emb|CAB45867.1| Lsm4 protein [Homo sapiens]
gi|12653237|gb|AAH00387.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|13177763|gb|AAH03652.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|18645159|gb|AAH22198.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|23273864|gb|AAH23665.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|73587230|gb|AAI03244.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Bos taurus]
gi|119605092|gb|EAW84686.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|190690627|gb|ACE87088.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
protein [synthetic construct]
gi|190691985|gb|ACE87767.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
protein [synthetic construct]
gi|208966682|dbj|BAG73355.1| LSM4 homolog, U6 small nuclear RNA associated [synthetic
construct]
gi|296486080|tpg|DAA28193.1| TPA: U6 snRNA-associated Sm-like protein LSm4 [Bos taurus]
gi|380784377|gb|AFE64064.1| U6 snRNA-associated Sm-like protein LSm4 isoform 1 [Macaca
mulatta]
gi|383408443|gb|AFH27435.1| U6 snRNA-associated Sm-like protein LSm4 [Macaca mulatta]
gi|410214894|gb|JAA04666.1| LSM4 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410249724|gb|JAA12829.1| LSM4 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410289766|gb|JAA23483.1| LSM4 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410328789|gb|JAA33341.1| LSM4 homolog, U6 small nuclear RNA associated [Pan troglodytes]
Length = 139
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEIID 77
>gi|297743868|emb|CBI36838.3| unnamed protein product [Vitis vinifera]
Length = 196
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSV 60
++L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 46 KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM--- 102
Query: 61 KNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
C+IRG+ ++Y+++P + +D +Q+ T+ A
Sbjct: 103 PECYIRGNTIKYLRVPDEVIDK--VQEETKNRA 133
>gi|270010565|gb|EFA07013.1| hypothetical protein TcasGA2_TC009983 [Tribolium castaneum]
Length = 140
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 2 ERLLFYSFFKSLV----GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHM 57
E+ F+++ SLV K V++L+N+ + G + VD +N+++ D+ DP H
Sbjct: 9 EKYYFHNYLTSLVKALENKHTVIDLRNESCVSGLIKHVDGLMNVEMGDVVFYDPRGQRHY 68
Query: 58 LSVKNCFIRGSVVRYVQLPGDEVDTQLLQD 87
K+ F+ +RYV +P TQLL++
Sbjct: 69 F--KDFFVSARNIRYVHIPEGLSSTQLLEN 96
>gi|350535801|ref|NP_001232447.1| U6 snRNA-associated Sm-like protein LSm4 [Taeniopygia guttata]
gi|363743848|ref|XP_418245.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Gallus
gallus]
gi|197129949|gb|ACH46447.1| putative LSM4 homolog U6 small nuclear RNA associated
[Taeniopygia guttata]
Length = 138
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEIID 77
>gi|195473653|ref|XP_002089107.1| GE25987 [Drosophila yakuba]
gi|194175208|gb|EDW88819.1| GE25987 [Drosophila yakuba]
Length = 140
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELKN + G L S D ++NI L D+ T D D++ M C+IRGS ++Y+++
Sbjct: 1 MLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPE---CYIRGSTIKYLRI 57
Query: 76 PGDEVDTQLLQDATRK 91
P DEV + +DA K
Sbjct: 58 P-DEVIDMVKEDAQAK 72
>gi|157109644|ref|XP_001650762.1| small nuclear ribonucleoprotein sm [Aedes aegypti]
gi|108878946|gb|EAT43171.1| AAEL005355-PA [Aedes aegypti]
Length = 154
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSKDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEVID 77
>gi|414876860|tpg|DAA53991.1| TPA: hypothetical protein ZEAMMB73_426325 [Zea mays]
Length = 172
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRG+ ++Y+++P + +D +Q+ T K
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETSK 85
>gi|66807347|ref|XP_637396.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74853183|sp|Q54KX4.1|LSM4_DICDI RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4
gi|60465817|gb|EAL63891.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 177
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ G ++VELKN + G L + D ++NI L ++ T D DK+ ++
Sbjct: 1 MLPLSLLRTGQGHQIMVELKNGETYNGLLVNCDNWMNINLKNVIRTSKDSDKF---WKIQ 57
Query: 62 NCFIRGSVVRYVQLPGDEV 80
+C+IRG+ ++Y+ +P DE+
Sbjct: 58 SCYIRGNTIKYISVP-DEI 75
>gi|402216859|gb|EJT96942.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 132
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + K ++VELKN ++ G L + D ++NI L ++ T P+ +K C
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGETLNGHLVNCDNFMNITLREVYQTSPEG-DRFWKLKEC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
++RGS ++Y+++P +D L+ +E
Sbjct: 60 YVRGSTIKYLRVPDQLLDEVQLEQFHARE 88
>gi|41152340|ref|NP_956990.1| U6 snRNA-associated Sm-like protein LSm4 [Danio rerio]
gi|37589787|gb|AAH59435.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Danio rerio]
gi|38328316|gb|AAH62285.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Danio rerio]
Length = 143
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEIID 77
>gi|183230265|ref|XP_654174.2| U6 snRNA-associated Sm-like protein LSm2 [Entamoeba histolytica
HM-1:IMSS]
gi|169802999|gb|EAL48785.2| U6 snRNA-associated Sm-like protein LSm2, putative [Entamoeba
histolytica HM-1:IMSS]
gi|407037431|gb|EKE38638.1| U6 snRNA-associated Sm family protein LSm2, putative [Entamoeba
nuttalli P19]
gi|449704671|gb|EMD44870.1| U6 snrnaassociated Sm family LSm2 protein, putative [Entamoeba
histolytica KU27]
Length = 62
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 39 LNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
LNIKL ++ D +P + ++ +CFIRG+ +RYV + + +D QLL DAT E
Sbjct: 2 LNIKLNNLKC-DATLFPQIQTMTDCFIRGNTIRYVSMAENNIDVQLLHDATLLE 54
>gi|350409693|ref|XP_003488818.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Bombus
impatiens]
gi|380028027|ref|XP_003697713.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Apis
florea]
Length = 139
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEVID 77
>gi|225450786|ref|XP_002283804.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Vitis vinifera]
Length = 149
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
C+IRG+ ++Y+++P + +D +Q+ T+ A
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETKNRA 87
>gi|449529475|ref|XP_004171725.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Cucumis sativus]
Length = 149
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
C+IRG+ ++Y+++P + +D +Q+ T+ A
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETKSRA 87
>gi|449526219|ref|XP_004170111.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Cucumis sativus]
Length = 149
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
C+IRG+ ++Y+++P + +D +Q+ T+ A
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETKSRA 87
>gi|414876858|tpg|DAA53989.1| TPA: hypothetical protein ZEAMMB73_426325, partial [Zea mays]
Length = 112
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRG+ ++Y+++P + +D +Q+ T K
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETSK 85
>gi|255629165|gb|ACU14927.1| unknown [Glycine max]
Length = 148
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
C+IRG+ ++Y+++P + +D +Q+ T+ A
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETKSRA 87
>gi|293335959|ref|NP_001170512.1| uncharacterized LOC100384520 [Zea mays]
gi|238005774|gb|ACR33922.1| unknown [Zea mays]
gi|413947013|gb|AFW79662.1| U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
gi|414876859|tpg|DAA53990.1| TPA: U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
Length = 146
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRG+ ++Y+++P + +D +Q+ T K
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETSK 85
>gi|13161882|emb|CAC33027.1| Lsm4 protein [Takifugu rubripes]
Length = 144
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEIID 77
>gi|224015193|ref|XP_002297255.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968091|gb|EED86446.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 139
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S KS ++VELK+ + G L + D Y+N+ L D+ T + DK+ + C+I
Sbjct: 5 SLLKSATTLPLLVELKSGTTYNGRLVNCDTYMNLNLRDVVCTSKEGDKF---WKLNECYI 61
Query: 66 RGSVVRYVQLPGDEVDTQLLQDATR 90
RGS V+Y++LP D V+ +D R
Sbjct: 62 RGSSVKYLRLPEDAVERVKEEDEGR 86
>gi|224015187|ref|XP_002297252.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968088|gb|EED86443.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 139
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S KS ++VELK+ + G L + D Y+N+ L D+ T + DK+ + C+I
Sbjct: 5 SLLKSATTLPLLVELKSGTTYNGRLVNCDTYMNLNLRDVVCTSKEGDKF---WKLNECYI 61
Query: 66 RGSVVRYVQLPGDEVDTQLLQDATR 90
RGS V+Y++LP D V+ +D R
Sbjct: 62 RGSSVKYLRLPEDAVERVKEEDEGR 86
>gi|209735614|gb|ACI68676.1| U6 snRNA-associated Sm-like protein LSm4 [Salmo salar]
Length = 150
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEIID 77
>gi|148696909|gb|EDL28856.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Mus musculus]
Length = 143
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 7 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 63
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATR 90
C+IRGS ++Y+++P DE+ + ++A +
Sbjct: 64 CYIRGSTIKYLRIP-DEIIDMVREEAAK 90
>gi|348523129|ref|XP_003449076.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Oreochromis niloticus]
Length = 147
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEIID 77
>gi|209733716|gb|ACI67727.1| U6 snRNA-associated Sm-like protein LSm4 [Salmo salar]
Length = 147
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEIID 77
>gi|242056887|ref|XP_002457589.1| hypothetical protein SORBIDRAFT_03g009890 [Sorghum bicolor]
gi|241929564|gb|EES02709.1| hypothetical protein SORBIDRAFT_03g009890 [Sorghum bicolor]
Length = 145
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRG+ ++Y+++P + +D +Q+ T K
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETSK 85
>gi|226491554|ref|NP_001152235.1| U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
gi|195654155|gb|ACG46545.1| U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
Length = 146
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRG+ ++Y+++P + +D +Q+ T K
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETSK 85
>gi|356572732|ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Glycine max]
Length = 148
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
C+IRG+ ++Y+++P + +D +Q+ T+ A
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETKSRA 87
>gi|432854576|ref|XP_004067969.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Oryzias
latipes]
Length = 144
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEIID 77
>gi|332376551|gb|AEE63415.1| unknown [Dendroctonus ponderosae]
Length = 135
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPE-- 58
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 59 -CYIRGSTIKYLRIPDEVID 77
>gi|225437330|ref|XP_002264738.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Vitis vinifera]
Length = 150
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
C+IRG+ ++Y+++P + +D +Q+ T+ A
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETKNRA 87
>gi|242212742|ref|XP_002472203.1| predicted protein [Postia placenta Mad-698-R]
gi|220728761|gb|EED82649.1| predicted protein [Postia placenta Mad-698-R]
Length = 96
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
S + K ++VELKN + G L + D ++NI L ++ T+ D +K C+IRG
Sbjct: 5 SLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTNADG-DRFWKLKECYIRG 63
Query: 68 SVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
S ++Y+++P +D + +EA + R
Sbjct: 64 STIKYLRVPDTLLDAVKEEQNKAREAGRSAR 94
>gi|168021867|ref|XP_001763462.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685255|gb|EDQ71651.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 121
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 10 FKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSV 69
++L+G +++VEL+ND+SI G L D +N+ + D +V D + L + F+RGS
Sbjct: 17 IQALMGLELLVELRNDLSIRGILDDCDNAMNVIIKDATVEDVEGVQKQLPL--VFLRGSN 74
Query: 70 VRYVQLPGDEVDTQLLQDATR 90
+R+V +P D VD L + R
Sbjct: 75 IRFVHIP-DNVDIMKLVEERR 94
>gi|405977571|gb|EKC42014.1| UPF0632 protein A [Crassostrea gigas]
Length = 697
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S ++ V ++VELKN + G L S D ++NI L ++ T D D++ M
Sbjct: 8 LPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWRM---PE 64
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 65 CYIRGSTIKYLRIPDEVID 83
>gi|391324905|ref|XP_003736982.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like
[Metaseiulus occidentalis]
Length = 136
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
++L G++ V+L+N+ + GT+ VD +NI+++D VT P+ S +RG
Sbjct: 21 LVQALEGRETTVDLRNETEVVGTIEVVDGRMNIQMSDAVVTMPNGSSRQFSF--LHVRGR 78
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 79 NVRYVHIPPD 88
>gi|297812937|ref|XP_002874352.1| hypothetical protein ARALYDRAFT_326933 [Arabidopsis lyrata subsp.
lyrata]
gi|297320189|gb|EFH50611.1| hypothetical protein ARALYDRAFT_326933 [Arabidopsis lyrata subsp.
lyrata]
Length = 143
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATR 90
C+IRG+ ++Y+++P DEV ++ ++ +R
Sbjct: 58 ECYIRGNTIKYLRVP-DEVIDKVQEEKSR 85
>gi|357619535|gb|EHJ72069.1| hypothetical protein KGM_17625 [Danaus plexippus]
Length = 138
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEV 80
C+IRGS ++Y+++P DEV
Sbjct: 58 ECYIRGSTIKYLRIP-DEV 75
>gi|119605093|gb|EAW84687.1| LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
Length = 163
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 26 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 82
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 83 CYIRGSTIKYLRIPDEIID 101
>gi|328780963|ref|XP_624908.3| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like [Apis
mellifera]
Length = 138
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEVID 77
>gi|357129770|ref|XP_003566534.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Brachypodium distachyon]
gi|326528247|dbj|BAJ93305.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 142
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRG+ ++Y+++P + +D +Q+ T K
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETSK 85
>gi|326516310|dbj|BAJ92310.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521472|dbj|BAK00312.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 143
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRG+ ++Y+++P + +D +Q+ T K
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETSK 85
>gi|354477407|ref|XP_003500912.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like
[Cricetulus griseus]
gi|344245005|gb|EGW01109.1| U7 snRNA-associated Sm-like protein LSm10 [Cricetulus griseus]
Length = 122
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ S G + +VD ++NI+L +++ T D++ H + + + F+ G
Sbjct: 20 LLQGLQGQITTVDLRDESSARGRIDNVDAFMNIRLANVTYT--DRWGHQVELDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|47217413|emb|CAG00773.1| unnamed protein product [Tetraodon nigroviridis]
Length = 131
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 58
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 59 CYIRGSTIKYLRIPDEIID 77
>gi|357511251|ref|XP_003625914.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
gi|357516335|ref|XP_003628456.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
gi|355500929|gb|AES82132.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
gi|355522478|gb|AET02932.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
Length = 150
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATR 90
C+IRG+ ++Y+++P DEV ++ ++ +R
Sbjct: 58 ECYIRGNTIKYLRVP-DEVIDKVQEEKSR 85
>gi|355703322|gb|EHH29813.1| Glycine-rich protein, partial [Macaca mulatta]
gi|440903986|gb|ELR54561.1| U6 snRNA-associated Sm-like protein LSm4, partial [Bos grunniens
mutus]
Length = 139
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 58
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 59 CYIRGSTIKYLRIPDEIID 77
>gi|242207126|ref|XP_002469417.1| predicted protein [Postia placenta Mad-698-R]
gi|220731446|gb|EED85290.1| predicted protein [Postia placenta Mad-698-R]
Length = 106
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
S + K ++VELKN + G L + D ++NI L ++ T+ D +K C+IRG
Sbjct: 5 SLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTNADG-DRFWKLKECYIRG 63
Query: 68 SVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
S ++Y+++P +D + +EA + R
Sbjct: 64 STIKYLRVPDTLLDAVKEEQNKAREAGRSAR 94
>gi|395513176|ref|XP_003760805.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Sarcophilus
harrisii]
Length = 152
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 15 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 71
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 72 CYIRGSTIKYLRIPDEIID 90
>gi|354473886|ref|XP_003499163.1| PREDICTED: hypothetical protein LOC100769464 [Cricetulus griseus]
Length = 391
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 254 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 310
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATR 90
C+IRGS ++Y+++P DE+ + ++A +
Sbjct: 311 ECYIRGSTIKYLRIP-DEIIDMVREEAAK 338
>gi|326934546|ref|XP_003213349.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like [Meleagris
gallopavo]
Length = 174
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 38 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 94
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 95 CYIRGSTIKYLRIPDEIID 113
>gi|218187914|gb|EEC70341.1| hypothetical protein OsI_01238 [Oryza sativa Indica Group]
Length = 147
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRG+ ++Y+++P + +D +Q+ T K
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETSK 85
>gi|194761808|ref|XP_001963115.1| GF14101 [Drosophila ananassae]
gi|190616812|gb|EDV32336.1| GF14101 [Drosophila ananassae]
Length = 140
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELKN + G L S D ++NI L D+ T D D++ M C+IRGS ++Y+++
Sbjct: 1 MLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPE---CYIRGSTIKYLRI 57
Query: 76 PGDEVDTQLLQDATRK 91
P DEV + +DA K
Sbjct: 58 P-DEVIDMVKEDAQAK 72
>gi|281201415|gb|EFA75627.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 157
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ G ++VELKN + G L + D ++NI L ++ T D DK+ ++
Sbjct: 1 MLPLSLLRTGQGHQIMVELKNGETFNGYLVNCDNWMNINLKNVIRTSKDSDKF---WKLQ 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNAT 97
+C+IRG+ ++Y+ +P + +D + ++ K+ A+
Sbjct: 58 SCYIRGNTIKYISVPDEIIDMVVEEEQVVKQHQPAS 93
>gi|427784849|gb|JAA57876.1| Putative small nuclear ribonucleoprotein snrnp [Rhipicephalus
pulchellus]
Length = 142
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEVID 77
>gi|330798959|ref|XP_003287516.1| hypothetical protein DICPUDRAFT_47407 [Dictyostelium purpureum]
gi|325082462|gb|EGC35943.1| hypothetical protein DICPUDRAFT_47407 [Dictyostelium purpureum]
Length = 168
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ G ++VELKN + G L + D ++NI L ++ T D DK+ ++
Sbjct: 1 MLPLSLLRTGQGHQIMVELKNGETYNGYLINCDNWMNINLRNVIRTSKDSDKF---WKIQ 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+C+IRG+ ++Y+ +P + +D
Sbjct: 58 SCYIRGNTIKYISVPDEIID 77
>gi|115435742|ref|NP_001042629.1| Os01g0256900 [Oryza sativa Japonica Group]
gi|12230291|sp|Q9LGE6.1|LSM4_ORYSJ RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4
gi|9711887|dbj|BAB07978.1| putative glycine-rich protein 2 [Oryza sativa Japonica Group]
gi|108792648|dbj|BAE95809.1| putative glycine-rich protein 2 [Oryza sativa Japonica Group]
gi|113532160|dbj|BAF04543.1| Os01g0256900 [Oryza sativa Japonica Group]
gi|215704752|dbj|BAG94780.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618133|gb|EEE54265.1| hypothetical protein OsJ_01157 [Oryza sativa Japonica Group]
Length = 147
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRG+ ++Y+++P + +D +Q+ T K
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETSK 85
>gi|409080918|gb|EKM81278.1| hypothetical protein AGABI1DRAFT_112946 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197836|gb|EKV47763.1| hypothetical protein AGABI2DRAFT_192916 [Agaricus bisporus var.
bisporus H97]
Length = 131
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + K ++VELKN + G L + D ++NI L ++ T D +K C
Sbjct: 1 MLPLSLLSAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSADG-DRFWKLKEC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
+IRGS ++Y+++P D + Q+ ++ R N
Sbjct: 60 YIRGSTIKYLRVP-DTLLDQVKEEQNRAREAN 90
>gi|453086958|gb|EMF14999.1| Sm-like ribonucleo protein [Mycosphaerella populorum SO2202]
Length = 138
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELK ++ G L S D Y+NI L ++ T P+ H + C
Sbjct: 1 MLPLGLLTAAQGHPMLVELKTGETLNGHLVSCDTYMNITLKEVVQTSPEG-DHFFRLAEC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
++RG+ ++Y+++P + VD Q A ++
Sbjct: 60 YVRGNNIKYLRVPDEVVDVVKDQQANQQ 87
>gi|392591224|gb|EIW80552.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 127
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + K ++VELKN + G L + D ++NI L ++ T D +K C
Sbjct: 1 MLPLSLLSAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSADG-DRFWKLKEC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNAT 97
+IRGS ++Y+++P +D + +D R N T
Sbjct: 60 YIRGSTIKYLRVPDQLLDV-VKEDQLRAREANRT 92
>gi|355755618|gb|EHH59365.1| hypothetical protein EGM_09452, partial [Macaca fascicularis]
Length = 138
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 57
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 CYIRGSTIKYLRIPDEIID 76
>gi|307178481|gb|EFN67170.1| U6 snRNA-associated Sm-like protein LSm4 [Camponotus floridanus]
Length = 139
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L + K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLTLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEVID 77
>gi|351701223|gb|EHB04142.1| U6 snRNA-associated Sm-like protein LSm4, partial [Heterocephalus
glaber]
Length = 117
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 58
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 59 CYIRGSTIKYLRIPDEIID 77
>gi|112253614|gb|ABI14393.1| small nuclear riboprotein Sm-D1 [Karlodinium micrum]
Length = 112
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + VVVELKN + GT+ VD +N + ++ T + P +S+ + IRG+
Sbjct: 6 FLMKLSNESVVVELKNSTVVAGTITGVDVSMNTHMKNVKFTVKGEPP--VSMDHLTIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
VRYV LP +DT L+ DA R
Sbjct: 64 NVRYVILPDSIPLDTLLVDDAKR 86
>gi|449279546|gb|EMC87118.1| U6 snRNA-associated Sm-like protein LSm4, partial [Columba livia]
Length = 138
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 58
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 59 CYIRGSTIKYLRIPDEIID 77
>gi|323452593|gb|EGB08466.1| hypothetical protein AURANDRAFT_25994 [Aureococcus
anophagefferens]
Length = 139
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S + G+ +++ELKN + G L S D ++N+ L ++ T D D++ +K
Sbjct: 1 MLPLSLLTTAKGQPMLIELKNGDTYNGRLVSADTWMNVNLEEVICTSRDGDRF---WKLK 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
C+IRG+ ++Y+++P + +D ++ + K+A
Sbjct: 58 ECYIRGNSIKYLRIPDEIIDLVQEEEISAKDA 89
>gi|340383285|ref|XP_003390148.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like, partial
[Amphimedon queenslandica]
Length = 93
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
L S K+ ++VELKN + G L S D ++NI+L ++ T D + CF
Sbjct: 4 LPLSLLKAAQDNPMLVELKNGETYNGHLVSCDNWMNIQLKEVICTSRDGE-RFWKMPECF 62
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDA 88
IRGS+ +Y+++P DEV ++ ++A
Sbjct: 63 IRGSMTKYLRIP-DEVIDKVKEEA 85
>gi|426230288|ref|XP_004009208.1| PREDICTED: uncharacterized protein LOC101110507, partial [Ovis
aries]
Length = 207
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 5 VLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 61
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 62 ECYIRGSTIKYLRIPDEIID 81
>gi|346469961|gb|AEO34825.1| hypothetical protein [Amblyomma maculatum]
Length = 142
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEVID 77
>gi|345488677|ref|XP_003425963.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Nasonia
vitripennis]
Length = 138
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRGS ++Y+++P DEV + +D K
Sbjct: 58 ECYIRGSTIKYLRIP-DEVIDMVKEDVQMK 86
>gi|255076339|ref|XP_002501844.1| predicted protein [Micromonas sp. RCC299]
gi|226517108|gb|ACO63102.1| predicted protein [Micromonas sp. RCC299]
Length = 123
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L S D ++N+ L ++ T D D++ M
Sbjct: 1 MLPLSLLKTSQGHPMLVELKNGETYNGHLVSCDTWMNVHLREVICTSKDGDRFWRM---A 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
NC++RG+ ++Y+ +P DEV L+Q+ K++
Sbjct: 58 NCYVRGNTIKYICVP-DEV-IGLVQEENLKKS 87
>gi|410921860|ref|XP_003974401.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Takifugu rubripes]
Length = 147
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 6 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 62
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 63 CYIRGSTIKYLRIPDEIID 81
>gi|417408054|gb|JAA50600.1| Putative small nuclear ribonucleoprotein snrnp, partial [Desmodus
rotundus]
Length = 142
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 5 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 61
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 62 CYIRGSTIKYLRIPDEIID 80
>gi|270007999|gb|EFA04447.1| hypothetical protein TcasGA2_TC014750 [Tribolium castaneum]
Length = 130
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S ++ ++VELKN + G L S D ++NI L ++ T D DK+ M C+I
Sbjct: 17 SLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PECYI 73
Query: 66 RGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
RGS ++Y+++P DEV D ++EAV R
Sbjct: 74 RGSTIKYLRIP-DEV-----IDMVKEEAVVKNR 100
>gi|344283091|ref|XP_003413306.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Loxodonta africana]
Length = 151
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 14 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 70
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 71 CYIRGSTIKYLRIPDEIID 89
>gi|301108303|ref|XP_002903233.1| U6 snRNA-associated Sm-like protein [Phytophthora infestans
T30-4]
gi|262097605|gb|EEY55657.1| U6 snRNA-associated Sm-like protein [Phytophthora infestans
T30-4]
Length = 82
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++N+ L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRFWKM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQ 83
C+IRG+ ++Y+++P +EV++Q
Sbjct: 58 ECYIRGNTIKYIRVP-NEVNSQ 78
>gi|147768838|emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
Length = 3804
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M C+I
Sbjct: 3659 SLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---PECYI 3715
Query: 66 RGSVVRYVQLPGDEVDTQLLQDATRKEA 93
RG+ ++Y+++P + +D +Q+ T+ A
Sbjct: 3716 RGNTIKYLRVPDEVIDK--VQEETKNRA 3741
>gi|145344169|ref|XP_001416610.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576836|gb|ABO94903.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 123
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F ++LVG VV+E ++DV++ G L D+ ++ LT+ P+ H ++ F+R
Sbjct: 15 FIQALVGTTVVIECRDDVALRGHLEQCDEGMHCTLTNAIRVTPEG--HKTKLERVFVRAR 72
Query: 69 VVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
++RYV +D L + R E NA+R
Sbjct: 73 MIRYVHF-APTIDPLELIEQKRLEWFNASR 101
>gi|167516422|ref|XP_001742552.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779176|gb|EDQ92790.1| predicted protein [Monosiga brevicollis MX1]
Length = 115
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ ++VELKN + G L D Y+NI + D+++T D D++ M
Sbjct: 1 MLPLSLLRAASNHMMLVELKNGETYNGHLSKCDNYMNITMRDVTLTSKDGDRFWKM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
C+IRG+ ++++++P + +D + ++ + K V
Sbjct: 58 ECYIRGNNIKFLRIPDEVIDQVVEEERSNKNRV 90
>gi|302814278|ref|XP_002988823.1| hypothetical protein SELMODRAFT_128761 [Selaginella
moellendorffii]
gi|300143394|gb|EFJ10085.1| hypothetical protein SELMODRAFT_128761 [Selaginella
moellendorffii]
Length = 180
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT-----DPDKYPHMLSVKN 62
S K+ G ++VELKN + G L S D ++NI L ++ T D D++ M
Sbjct: 5 SLLKTAHGHPMLVELKNGETYNGHLVSCDSWMNIHLREVICTSKASDDGDRFWRM---PE 61
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRG+ ++Y+++P + +D +Q+ T++
Sbjct: 62 CYIRGNTIKYLRVPDEVIDK--VQEETKR 88
>gi|390362890|ref|XP_003730251.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Strongylocentrotus purpuratus]
Length = 151
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 ERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLS 59
E +L S ++ ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 26 ENVLPLSLLRTAQNHPMLVELKNGETYNGHLVACDNWMNINLREVICTSRDGDRFWRM-- 83
Query: 60 VKNCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 84 -PECYIRGSTIKYLRIPDEVID 104
>gi|302681117|ref|XP_003030240.1| hypothetical protein SCHCODRAFT_57519 [Schizophyllum commune
H4-8]
gi|300103931|gb|EFI95337.1| hypothetical protein SCHCODRAFT_57519 [Schizophyllum commune
H4-8]
Length = 129
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S + K ++VELKN + G L + D ++NI L ++ T D DK+ +K C+I
Sbjct: 5 SLLTAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTNADGDKF---WKLKECYI 61
Query: 66 RGSVVRYVQLPGDEVD 81
RGS ++Y+++P + +D
Sbjct: 62 RGSTIKYLRIPDELLD 77
>gi|443922752|gb|ELU42142.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 137
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
S + K ++VELKN + G L + D ++NI L ++ T P+ +K C+IRG
Sbjct: 15 SLLNAAQNKPMLVELKNGETFNGHLVNCDTFMNITLREVYQTSPEG-DRFWKLKECYIRG 73
Query: 68 SVVRYVQLPGDEVDT 82
S+++Y+++P +D
Sbjct: 74 SMIKYLRVPDALLDN 88
>gi|58265314|ref|XP_569813.1| glycine rich protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57226045|gb|AAW42506.1| glycine rich protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 117
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + GK ++VELKN V+ G L D ++N+ L ++ T D +K
Sbjct: 1 MLPLSLLTAAQGKPMLVELKNGVTFNGHLVECDTFMNVTLREVYQTSADG-ERFWKMKEM 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
FI+G++++Y ++ D + Q ++ + A N R
Sbjct: 60 FIKGNIIKYFRIA-DNILEQAAEEQDKARAANRAR 93
>gi|390335655|ref|XP_783129.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Strongylocentrotus purpuratus]
Length = 161
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 2 ERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLS 59
E +L S ++ ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 26 ENVLPLSLLRTAQNHPMLVELKNGETYNGHLVACDNWMNINLREVICTSRDGDRFWRM-- 83
Query: 60 VKNCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 84 -PECYIRGSTIKYLRIPDEVID 104
>gi|395848095|ref|XP_003796696.1| PREDICTED: uncharacterized protein LOC100963645 [Otolemur
garnettii]
Length = 312
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M C+I
Sbjct: 178 SLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PECYI 234
Query: 66 RGSVVRYVQLPGDEVD 81
RGS ++Y+++P + +D
Sbjct: 235 RGSTIKYLRIPDEIID 250
>gi|354496952|ref|XP_003510587.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like,
partial [Cricetulus griseus]
Length = 102
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 11 KSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVV 70
+ L G+ V+L+++ S G + +VD ++NI+L +++ T D++ H + + + F+ G V
Sbjct: 2 EGLQGQITTVDLQDESSARGRIDNVDAFMNIRLANVTYT--DRWGHQVELDDLFVTGRNV 59
Query: 71 RYVQLPGD 78
RYV +P D
Sbjct: 60 RYVHIPDD 67
>gi|91084013|ref|XP_975325.1| PREDICTED: similar to LSM4 homolog, U6 small nuclear RNA associated
[Tribolium castaneum]
Length = 163
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 11/93 (11%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S ++ ++VELKN + G L S D ++NI L ++ T D DK+ M C+I
Sbjct: 17 SLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PECYI 73
Query: 66 RGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
RGS ++Y+++P DEV D ++EAV R
Sbjct: 74 RGSTIKYLRIP-DEV-----IDMVKEEAVVKNR 100
>gi|118394903|ref|XP_001029810.1| Sm protein [Tetrahymena thermophila]
gi|89284080|gb|EAR82147.1| Sm protein [Tetrahymena thermophila SB210]
Length = 111
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
F L G+ V +ELKN I G++ +VD +N L+ + +T K P +S+ + I
Sbjct: 3 LVRFLMKLKGQTVTIELKNGTQIIGSIIAVDIRMNTHLSKVKMTIKGKNP--VSLDHLTI 60
Query: 66 RGSVVRYVQLPGD-EVDTQLLQDATR 90
RG+ +RY QLP +DT L+ D +
Sbjct: 61 RGNNIRYFQLPDALPLDTLLVDDQPK 86
>gi|301108373|ref|XP_002903268.1| U6 snRNA-associated Sm-like protein LSm4, putative [Phytophthora
infestans T30-4]
gi|262097640|gb|EEY55692.1| U6 snRNA-associated Sm-like protein LSm4, putative [Phytophthora
infestans T30-4]
Length = 79
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++N+ L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRFWKM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQ 83
C+IRG+ ++Y+++P +EV++Q
Sbjct: 58 ECYIRGNTIKYIRVP-NEVNSQ 78
>gi|12230329|sp|Q9ZRU9.1|LSM4_FAGSY RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4;
AltName: Full=Glycine-rich protein 2
gi|3927916|emb|CAA10233.1| glycine-rich protein 2 [Fagus sylvatica]
Length = 148
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELK+ + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKSGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
+C+IRG+ ++Y+++P + +D +Q+ T+ A
Sbjct: 58 DCYIRGNTIKYLRVPDEVIDK--VQEETKSRA 87
>gi|224064436|ref|XP_002301475.1| predicted protein [Populus trichocarpa]
gi|222843201|gb|EEE80748.1| predicted protein [Populus trichocarpa]
Length = 150
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRG+ ++Y+++P + +D
Sbjct: 58 ECYIRGNTIKYLRVPDEVID 77
>gi|77745469|gb|ABB02633.1| glycine rich protein-like [Solanum tuberosum]
gi|82623401|gb|ABB87115.1| glycine rich protein-like [Solanum tuberosum]
Length = 147
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
C+IRG+ ++Y+++P + +D +Q+ T+
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETKSRG 87
>gi|19113071|ref|NP_596279.1| U6 snRNP-associated protein Lsm4 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|12230213|sp|O14352.1|LSM4_SCHPO RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4
gi|2276355|emb|CAB10801.1| U6 snRNP-associated protein Lsm4 (predicted) [Schizosaccharomyces
pombe]
Length = 121
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + + G+ ++VELKN + G L + D Y+N+ L ++ T PD + C
Sbjct: 1 MLPLTLLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREVIRTMPDG-DKFFRLPEC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLL-QDATRKE 92
+IRG+ ++Y+++ DEV +Q+ Q A ++E
Sbjct: 60 YIRGNNIKYLRI-QDEVLSQVAKQQAQQRE 88
>gi|443711054|gb|ELU05001.1| hypothetical protein CAPTEDRAFT_200433 [Capitella teleta]
Length = 136
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ V ++VELKN + G L S D ++NI + ++ T D D++ M
Sbjct: 1 MLPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINMREVICTSRDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C++RGS ++Y+++P + +D
Sbjct: 58 ECYVRGSTIKYLRIPDEIID 77
>gi|321456471|gb|EFX67578.1| hypothetical protein DAPPUDRAFT_218645 [Daphnia pulex]
Length = 135
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ ++VELKN + G L S D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 ECYIRGSTIKYLRIPDEVID 77
>gi|156846025|ref|XP_001645901.1| hypothetical protein Kpol_1045p29 [Vanderwaltozyma polyspora DSM
70294]
gi|156116571|gb|EDO18043.1| hypothetical protein Kpol_1045p29 [Vanderwaltozyma polyspora DSM
70294]
Length = 193
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPD------KYPHMLSVKNCFIRGS 68
G+ + +ELKN +I G L +VD ++N+ L+D+ D D + P LSV ++RG+
Sbjct: 12 GQKITIELKNGETIKGVLTNVDNWMNLTLSDVIQYDSDALNNGAEKPEGLSVPEIYLRGT 71
Query: 69 VVRYVQLPGDEVDT 82
++Y+ L D ++
Sbjct: 72 YIKYINLQDDIIEN 85
>gi|356500280|ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Glycine max]
Length = 149
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATR 90
C+IRG+ ++Y+++P + +D +Q+ T+
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETK 84
>gi|427778567|gb|JAA54735.1| Putative small nuclear ribonucleoprotein snrnp [Rhipicephalus
pulchellus]
Length = 167
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S ++ ++VELKN + G L S D ++NI L ++ T D DK+ M C+I
Sbjct: 30 SLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PECYI 86
Query: 66 RGSVVRYVQLPGDEVD 81
RGS ++Y+++P + +D
Sbjct: 87 RGSTIKYLRIPDEVID 102
>gi|12230258|sp|Q43582.1|LSM4_TOBAC RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4;
AltName: Full=Glycine-rich protein 10; Short=GRP 10
gi|790473|emb|CAA58702.1| unnamed protein product [Nicotiana tabacum]
Length = 146
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDA 88
C++RG+ ++Y+++P DEV ++ ++A
Sbjct: 58 ECYVRGNTIKYLRVP-DEVIDKVQEEA 83
>gi|403303582|ref|XP_003942405.1| PREDICTED: uncharacterized protein LOC101034609 [Saimiri
boliviensis boliviensis]
Length = 285
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 148 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 204
Query: 63 CFIRGSVVRYVQLPGDEV 80
C+IRGS ++Y+++P DE+
Sbjct: 205 CYIRGSTIKYLRIP-DEI 221
>gi|383858764|ref|XP_003704869.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Megachile rotundata]
Length = 158
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S ++ ++VELKN + G L S D ++NI L ++ T D DK+ M C+I
Sbjct: 24 SLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRM---PECYI 80
Query: 66 RGSVVRYVQLPGDEVD 81
RGS ++Y+++P + +D
Sbjct: 81 RGSTIKYLRIPDEVID 96
>gi|149571864|ref|XP_001512156.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like, partial
[Ornithorhynchus anatinus]
Length = 138
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S K+ +VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 LPLSLLKTAQNHPYLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 57
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 CYIRGSTIKYLRIPDEIID 76
>gi|255564128|ref|XP_002523061.1| Small nuclear ribonucleoprotein SM D3, putative [Ricinus
communis]
gi|223537623|gb|EEF39246.1| Small nuclear ribonucleoprotein SM D3, putative [Ricinus
communis]
Length = 147
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
C+IRG+ ++Y+++P + +D +Q+ T+ +
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETKSRS 87
>gi|340718601|ref|XP_003397753.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like isoform
2 [Bombus terrestris]
Length = 148
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 2 ERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
+++L S ++ ++VELKN + G L S D ++NI L + D DK+ M
Sbjct: 14 KKMLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLRE----DGDKFWRM---P 66
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 67 ECYIRGSTIKYLRIPDEVID 86
>gi|332019235|gb|EGI59745.1| U6 snRNA-associated Sm-like protein LSm4 [Acromyrmex echinatior]
Length = 138
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L + K+ ++VELKN + G L S D ++NI L ++ T D DK+ M
Sbjct: 1 LPLTLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PE 57
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 CYIRGSTIKYLRIPDEVID 76
>gi|402589501|gb|EJW83433.1| small nuclear ribonucleoprotein Sm D1 [Wuchereria bancrofti]
Length = 123
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
F L + V +ELKN + GT+ VD +N L + +T ++ P +S+ + I
Sbjct: 3 LVRFLMKLAHESVTIELKNGTLVTGTIVGVDVAMNTHLRTVKMTLKNREP--VSLDSLSI 60
Query: 66 RGSVVRYVQLPGD-EVDTQLLQDATRKEAVNATR 98
RG+ +RY+ LP +DT L+ D RK+ R
Sbjct: 61 RGNNIRYIILPDTIPLDTLLVDDEPRKKPARGGR 94
>gi|312077154|ref|XP_003141178.1| small nuclear ribonucleoprotein sm d1 [Loa loa]
gi|307763657|gb|EFO22891.1| small nuclear ribonucleoprotein sm d1 [Loa loa]
Length = 123
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
F L + V +ELKN + GT+ VD +N L + +T ++ P +S+ + I
Sbjct: 3 LVRFLMKLAHESVTIELKNGTLVTGTIVGVDVAMNTHLRTVKMTLKNREP--VSLDSLSI 60
Query: 66 RGSVVRYVQLPGD-EVDTQLLQDATRKEAVNATR 98
RG+ +RY+ LP +DT L+ D RK+ R
Sbjct: 61 RGNNIRYIILPDTIPLDTLLVDDEPRKKPARGGR 94
>gi|342319983|gb|EGU11928.1| RING finger domain-containing protein [Rhodotorula glutinis ATCC
204091]
Length = 885
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
LL F L + V +ELKN S+ GT+ VD +N L + +T + P L +
Sbjct: 125 LLLARFLMKLNNETVTIELKNGTSVHGTITGVDPSMNTHLKKVKMTVRGREPQALD--SL 182
Query: 64 FIRGSVVRYVQLPGD-EVDTQLLQDA 88
IRG+ VRY LP +DT L+ DA
Sbjct: 183 AIRGNNVRYFILPDSLPLDTLLIDDA 208
>gi|168013104|ref|XP_001759241.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689554|gb|EDQ75925.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 181
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M C+I
Sbjct: 5 SLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---PECYI 61
Query: 66 RGSVVRYVQLPG---DEVDTQLLQDATRKEAV 94
RG+ ++Y+++P D+V + ++ + RK +
Sbjct: 62 RGNTIKYLRVPDEVIDKVQEETVKRSDRKPTI 93
>gi|412992977|emb|CCO16510.1| U6 snRNA-associated Sm-like protein LSm4 [Bathycoccus prasinos]
Length = 122
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S K+ G ++VELKN + G L++ D ++N+ LT + T+ D ++ C
Sbjct: 1 MLPLSLLKTSQGHSMLVELKNGETYNGVLNACDAWMNVHLTKVVCTNKDG-DRFHELETC 59
Query: 64 FIRGSVVRYV 73
FIRG+ ++Y+
Sbjct: 60 FIRGNTIKYM 69
>gi|357442545|ref|XP_003591550.1| Small nuclear ribonucleoprotein sm [Medicago truncatula]
gi|355480598|gb|AES61801.1| Small nuclear ribonucleoprotein sm [Medicago truncatula]
Length = 106
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S K+ G ++VELKN + G L + D ++NI L ++ T D D++ +M C+I
Sbjct: 5 SLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVFCTSNDGDRFWYM---PKCYI 61
Query: 66 RGSVVRYVQLP 76
RG+ ++Y++LP
Sbjct: 62 RGNTIKYLRLP 72
>gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
gi|46101621|gb|EAK86854.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
Length = 850
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 14 VGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPD-KYPHMLSVKNCFIRGSVVRY 72
VG + VELK + GTL+ + NI + DI+VT PD K H+ +N +IRG+++R+
Sbjct: 15 VGHVITVELKGGAAYRGTLYDAEDNFNIAMKDITVTAPDGKQSHL---ENVYIRGNMLRF 71
Query: 73 VQLP 76
+ +P
Sbjct: 72 IIVP 75
>gi|353242003|emb|CCA73778.1| related to U6 snRNA-associated Sm-like protein LSm4
[Piriformospora indica DSM 11827]
Length = 126
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDI--SVTDPDKYPHMLSVK 61
+L S K+ GK ++VELKN S G L D ++NI L ++ + D D++ +K
Sbjct: 1 MLPSSLLKAAQGKPMMVELKNGESFNGHLIDCDAFMNITLREVYQTAADSDRF---WKLK 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
+IRGS ++Y+Q V LL DA ++E A
Sbjct: 58 EVYIRGSTIKYLQ-----VQPALL-DAVKEEQQKA 86
>gi|449542283|gb|EMD33263.1| hypothetical protein CERSUDRAFT_87573 [Ceriporiopsis
subvermispora B]
Length = 132
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + K ++VELKN + G L + D ++NI L ++ T + +K C
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGETFNGHLINCDNFMNITLREVYQTSAEG-DRFWKLKEC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
+IRGS ++Y+++P +D + +EA + R
Sbjct: 60 YIRGSTIKYLRVPDTLLDAVKEEQNRAREAGRSAR 94
>gi|346324354|gb|EGX93951.1| small nuclear ribonucleoprotein Sm D1 [Cordyceps militaris CM01]
Length = 119
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F V + V +ELKN + GT+ SV +N L + +T + P L N IRGS
Sbjct: 6 FLMKCVNEPVTIELKNGTIVNGTISSVTPQMNTALRTVKMTPRGQEPISLDTMN--IRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEAVNAT 97
+RY LP +DT L+ DA RKEA A+
Sbjct: 64 TIRYFILPDSLPLDTLLVDDAPKPKNKARKEAERAS 99
>gi|159109501|ref|XP_001705015.1| U6 snRNA-associated Sm-like protein LSm2, putative [Giardia
lamblia ATCC 50803]
gi|157433092|gb|EDO77341.1| U6 snRNA-associated Sm-like protein LSm2, putative [Giardia
lamblia ATCC 50803]
Length = 107
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPD-KYPHMLSVKN 62
+L+ +F LVG+ V VELK+ + + G L + D + N+ L + + D + H+ +
Sbjct: 1 MLYLTFLSKLVGRKVYVELKSGMQMHGVLLASDNFANLSLDNPVIYGSDISFTHVSGGRR 60
Query: 63 CFIRGSVVRYVQL---PGDE-VDTQLLQDATR 90
FIRGS ++++ L GDE + + L D +R
Sbjct: 61 VFIRGSAIQFLYLNDVEGDESLSLRALADDSR 92
>gi|395328270|gb|EJF60663.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 132
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S + K ++VELKN + G L + D ++NI L ++ T + DK+ ++
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSAEGDKF---WKLR 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
C+IRGS ++Y+++P +D + +EA + R
Sbjct: 58 ECYIRGSTIKYLRVPDTLLDAVKEEQNRAREAGRSAR 94
>gi|393239356|gb|EJD46888.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 136
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + K ++VELKN + G L + D ++NI L ++ T + +K C
Sbjct: 1 MLPLSLLNAAQSKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSAEG-DRFWKLKEC 59
Query: 64 FIRGSVVRYVQLPGDEVDT 82
+IRGS ++Y+++P +DT
Sbjct: 60 YIRGSTIKYLRVPDQLLDT 78
>gi|68060529|ref|XP_672249.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56489157|emb|CAI03757.1| hypothetical protein PB301337.00.0 [Plasmodium berghei]
Length = 48
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 58 LSVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
LS+K CF+RGSVVRYV LP +EV+ + L+ R+EA
Sbjct: 1 LSIKTCFVRGSVVRYVFLPSNEVNIEKLRHMCRQEA 36
>gi|357519603|ref|XP_003630090.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
gi|355524112|gb|AET04566.1| U6 snRNA-associated Sm-like protein LSm4 [Medicago truncatula]
Length = 161
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEV 80
C+IRG+ ++Y+++P DEV
Sbjct: 58 ECYIRGNTIKYLRVP-DEV 75
>gi|46105460|ref|XP_380534.1| hypothetical protein FG00358.1 [Gibberella zeae PH-1]
gi|408400659|gb|EKJ79736.1| hypothetical protein FPSE_00016 [Fusarium pseudograminearum
CS3096]
Length = 126
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN I GT+ SV +N L ++ +T + P +S++ IRGS
Sbjct: 6 FLMKCANETVTIELKNGTIIHGTISSVSPQMNTALRNVKMTIKGQEP--ISLETMNIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEAVN 95
+RY LP +DT L+ DA RKEA +
Sbjct: 64 TIRYFILPDSLPLDTLLIDDAPKPKNKARKEAAD 97
>gi|343427423|emb|CBQ70950.1| related to small nuclear ribonucleoprotein sm d3 [Sporisorium
reilianum SRZ2]
Length = 136
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 14 VGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPD-KYPHMLSVKNCFIRGSVVRY 72
VG + VELK + GTL+ + NI + DI+VT PD K H+ +N +IRG+++R+
Sbjct: 15 VGHVITVELKGGAAYRGTLYDAEDNFNIAMKDITVTAPDGKQSHL---ENVYIRGNMLRF 71
Query: 73 VQLP 76
+ +P
Sbjct: 72 IIVP 75
>gi|256083180|ref|XP_002577827.1| U6 snrna-associated sm-like protein lsm4 [Schistosoma mansoni]
gi|360044788|emb|CCD82336.1| U6 snrna-associated sm-like protein lsm4 [Schistosoma mansoni]
Length = 142
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L + K+ ++VELK+ + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPVTLLKAATNLPMLVELKSGETYNGHLVACDDWMNIHLKEVICTSRDGDRFWKM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDT-----QLLQDATRKEAVNATR 98
C+IRGS+++Y+++P D +D QL + R ++ + R
Sbjct: 58 ECYIRGSIIKYLRIPDDVIDKVKEDLQLAKMRNRSQSADTGR 99
>gi|195655461|gb|ACG47198.1| U6 snRNA-associated Sm-like protein LSm4 [Zea mays]
Length = 146
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+ RG+ ++Y+++P + +D +Q+ T K
Sbjct: 58 ECYXRGNTIKYLRVPDEVIDK--VQEETSK 85
>gi|294932805|ref|XP_002780450.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239890384|gb|EER12245.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 126
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G+ ++VELKN + G L + D ++N+ + D +T D D++ +
Sbjct: 2 VLPMSLLKTAQGQPIMVELKNGEAYSGVLANCDSWMNLHIRDAVLTSKDGDRF---WKLA 58
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATR 90
+IRG+ V+Y+++P VD + +DA R
Sbjct: 59 EAYIRGNHVKYLRIPDGVVDM-VQEDAIR 86
>gi|242007513|ref|XP_002424584.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508027|gb|EEB11846.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 126
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELKN + G L S D ++NI L ++ T D DK+ M C+IRGS ++YV++
Sbjct: 1 MLVELKNGETYNGHLVSCDNWMNIILREVICTSRDGDKFWRMPE---CYIRGSTIKYVRI 57
Query: 76 PGDEVDTQLLQDA 88
P DEV + ++A
Sbjct: 58 P-DEVIDMVKEEA 69
>gi|162605962|ref|XP_001713496.1| probable small nuclear ribonucleoprotein D1 [Guillardia theta]
gi|13794421|gb|AAK39798.1|AF083031_162 probable small nuclear ribonucleoprotein D1 [Guillardia theta]
Length = 77
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 7 YSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIR 66
Y+F K L G+++++ELKN++ I G + +VD+ +N+K+++IS D D N IR
Sbjct: 4 YNFIKQLKGEEIIIELKNNIIIMGVIVNVDKNMNLKVSNISDIDIDGQKFFKG--NLSIR 61
Query: 67 GSVVRYVQLP 76
+ +R + LP
Sbjct: 62 FNNIRIMVLP 71
>gi|307195781|gb|EFN77595.1| U6 snRNA-associated Sm-like protein LSm4 [Harpegnathos saltator]
Length = 138
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKN 62
L S ++ ++VELKN + G L S D ++N+ L ++ T D DK+ M
Sbjct: 1 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNVNLREVICTSRDGDKFWRM---PE 57
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P + +D
Sbjct: 58 CYIRGSTIKYLRIPDEVID 76
>gi|344241344|gb|EGV97447.1| U6 snRNA-associated Sm-like protein LSm4 [Cricetulus griseus]
Length = 124
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELKN + G L S D ++NI L ++ T D DK+ M C+IRGS ++Y+++
Sbjct: 1 MLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PECYIRGSTIKYLRI 57
Query: 76 PGDEVDTQLLQDATR 90
P DE+ + ++A +
Sbjct: 58 P-DEIIDMVREEAAK 71
>gi|348673931|gb|EGZ13750.1| hypothetical protein PHYSODRAFT_347058 [Phytophthora sojae]
Length = 153
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S K+ G ++VELKN + G L + D ++N+ L ++ T D D++ M C+I
Sbjct: 7 SLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRFWKM---PECYI 63
Query: 66 RGSVVRYVQLPGDEVDTQLLQDATRKE 92
RG+ ++Y+++P + +D +D ++++
Sbjct: 64 RGNTIKYIRVPNEILDMVNEEDFSKRD 90
>gi|294463283|gb|ADE77177.1| unknown [Picea sitchensis]
Length = 146
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLRTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRG+ ++Y+++P + +D
Sbjct: 58 ECYIRGNTIKYLRVPDEVID 77
>gi|224131146|ref|XP_002321012.1| predicted protein [Populus trichocarpa]
gi|222861785|gb|EEE99327.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRF---WRTP 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
C+IRG+ ++Y+++P + +D +Q+ T+ +
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETKSRS 87
>gi|223974607|gb|ACN31491.1| unknown [Zea mays]
Length = 146
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VE KN + G L + D ++NI L ++ T D DK+ M
Sbjct: 1 MLPLSLLKTAQGHPMLVEPKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
C+IRG+ ++Y+++P + +D +Q+ T K
Sbjct: 58 ECYIRGNTIKYLRVPDEVIDK--VQEETSK 85
>gi|398390838|ref|XP_003848879.1| hypothetical protein MYCGRDRAFT_96235 [Zymoseptoria tritici
IPO323]
gi|339468755|gb|EGP83855.1| hypothetical protein MYCGRDRAFT_96235 [Zymoseptoria tritici
IPO323]
Length = 129
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELK ++ G L S D Y+NI L ++ T PD + C
Sbjct: 1 MLPLGLLTAAQGHPMLVELKTGETLNGHLVSCDTYMNIMLKEVVQTSPDG-DKFFRLPEC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
++RG+ ++Y+++P + VD Q A ++
Sbjct: 60 YVRGNNIKYLRVPDEVVDAVKDQQAAQQ 87
>gi|390981143|pdb|4EMH|A Chain A, Crystal Structure Of Splsm4
gi|390981144|pdb|4EMH|B Chain B, Crystal Structure Of Splsm4
gi|390981145|pdb|4EMH|C Chain C, Crystal Structure Of Splsm4
gi|390981146|pdb|4EMH|D Chain D, Crystal Structure Of Splsm4
gi|390981147|pdb|4EMH|E Chain E, Crystal Structure Of Splsm4
gi|390981148|pdb|4EMH|F Chain F, Crystal Structure Of Splsm4
gi|390981149|pdb|4EMH|G Chain G, Crystal Structure Of Splsm4
gi|390981150|pdb|4EMH|H Chain H, Crystal Structure Of Splsm4
gi|390981151|pdb|4EMH|I Chain I, Crystal Structure Of Splsm4
gi|390981152|pdb|4EMH|J Chain J, Crystal Structure Of Splsm4
gi|390981153|pdb|4EMH|K Chain K, Crystal Structure Of Splsm4
gi|390981154|pdb|4EMH|L Chain L, Crystal Structure Of Splsm4
gi|390981155|pdb|4EMH|M Chain M, Crystal Structure Of Splsm4
gi|390981156|pdb|4EMH|N Chain N, Crystal Structure Of Splsm4
gi|390981157|pdb|4EMH|O Chain O, Crystal Structure Of Splsm4
gi|390981158|pdb|4EMH|P Chain P, Crystal Structure Of Splsm4
gi|390981159|pdb|4EMH|Q Chain Q, Crystal Structure Of Splsm4
gi|390981160|pdb|4EMH|R Chain R, Crystal Structure Of Splsm4
gi|390981161|pdb|4EMH|T Chain T, Crystal Structure Of Splsm4
gi|390981162|pdb|4EMH|U Chain U, Crystal Structure Of Splsm4
gi|390981163|pdb|4EMH|V Chain V, Crystal Structure Of Splsm4
gi|390981164|pdb|4EMH|W Chain W, Crystal Structure Of Splsm4
gi|390981165|pdb|4EMH|X Chain X, Crystal Structure Of Splsm4
gi|390981166|pdb|4EMH|Y Chain Y, Crystal Structure Of Splsm4
Length = 105
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
L + + G+ ++VELKN + G L + D Y N+ L ++ T PD + C+
Sbjct: 16 LPLTLLNATQGRPILVELKNGETFNGHLENCDNYXNLTLREVIRTXPDG-DKFFRLPECY 74
Query: 65 IRGSVVRYVQLPGDEVDTQLL-QDATRKE 92
IRG+ ++Y+++ DEV +Q+ Q A ++E
Sbjct: 75 IRGNNIKYLRIQ-DEVLSQVAKQQAQQRE 102
>gi|341892180|gb|EGT48115.1| hypothetical protein CAEBREN_25098 [Caenorhabditis brenneri]
gi|341901485|gb|EGT57420.1| CBN-SNR-3 protein [Caenorhabditis brenneri]
Length = 126
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L +S+T +K P + + IRG+
Sbjct: 6 FLMKLSHETVNIELKNGTQVSGTIMGVDVAMNTHLRAVSMTVKNKEP--VKLDTLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY+ LP +DT L+ D RK+
Sbjct: 64 NIRYIILPDPLALDTLLIDDEPRKK 88
>gi|308502654|ref|XP_003113511.1| CRE-SNR-3 protein [Caenorhabditis remanei]
gi|308263470|gb|EFP07423.1| CRE-SNR-3 protein [Caenorhabditis remanei]
Length = 127
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L +S+T +K P + + IRG+
Sbjct: 6 FLMKLSHETVNIELKNGTQVSGTIMGVDVAMNTHLRAVSMTVKNKEP--VKLDTLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY+ LP +DT L+ D RK+
Sbjct: 64 NIRYIILPDPLALDTLLIDDEPRKK 88
>gi|17536583|ref|NP_495306.1| Protein SNR-3 [Caenorhabditis elegans]
gi|2833218|sp|Q10013.1|SMD1_CAEEL RecName: Full=Probable small nuclear ribonucleoprotein Sm D1;
Short=Sm-D1; AltName: Full=snRNP core protein D1
gi|351064345|emb|CCD72707.1| Protein SNR-3 [Caenorhabditis elegans]
Length = 126
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L +S+T +K P + + IRG+
Sbjct: 6 FLMKLSHETVNIELKNGTQVSGTIMGVDVAMNTHLRAVSMTVKNKEP--VKLDTLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY+ LP +DT L+ D RK+
Sbjct: 64 NIRYIILPDPLALDTLLIDDEPRKK 88
>gi|403293073|ref|XP_003937547.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10 [Saimiri
boliviensis boliviensis]
Length = 123
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L +++ T D++ H + + + F+ G
Sbjct: 20 LLQGLQGRVTTVDLRDESVAHGRIDNVDAFMNIRLAEVTYT--DRWGHQVKLDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|219124066|ref|XP_002182333.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406294|gb|EEC46234.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 135
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
L + ++ G ++VELK + G + + D ++N+ L D+ T D H + +C+
Sbjct: 2 LPLTLLRAANGSPILVELKGGDTYNGRVVNCDTFMNMNLQDVICTSADGE-HFSKLPSCY 60
Query: 65 IRGSVVRYVQLPGDEVDTQLLQ 86
IRGS ++Y++LP ++T Q
Sbjct: 61 IRGSSIKYLRLPPSLLETAAAQ 82
>gi|224082029|ref|XP_002198421.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like
[Taeniopygia guttata]
Length = 123
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ VEL+++ + G + SVD ++N++L +++ T D+ + + F+ G
Sbjct: 20 LLQGLRGRVTTVELRDESAAAGRVTSVDAFMNVRLAEVTFT--DRRGAVSQLDELFVTGR 77
Query: 69 VVRYVQLPGDEVD 81
+RYV +P DEVD
Sbjct: 78 NIRYVHIP-DEVD 89
>gi|299750975|ref|XP_001829959.2| U6 snRNA-associated Sm-like protein LSm4 [Coprinopsis cinerea
okayama7#130]
gi|298409160|gb|EAU91881.2| U6 snRNA-associated Sm-like protein LSm4 [Coprinopsis cinerea
okayama7#130]
Length = 129
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + K ++VELKN + G L + D ++NI L ++ T + +K C
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSAEG-DRFWKLKEC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
+IRGS ++Y+++P +D + +EA
Sbjct: 60 YIRGSTIKYLRVPDQLLDAVKEEQNRAREA 89
>gi|224082027|ref|XP_002198423.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like
[Taeniopygia guttata]
Length = 123
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ VEL+++ + G + SVD ++N++L +++ T D+ + + F+ G
Sbjct: 20 LLQGLRGRVTTVELRDESAAAGRVTSVDAFMNVRLAEVTFT--DRQGAVSQLDELFVTGR 77
Query: 69 VVRYVQLPGDEVD 81
+RYV +P DEVD
Sbjct: 78 NIRYVHIP-DEVD 89
>gi|400602721|gb|EJP70323.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 119
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F V + V +ELKN + GT+ SV +N L + +T + P L N IRGS
Sbjct: 6 FLMKCVNEPVTIELKNGTIVNGTISSVTPQMNTALRTVKMTPRGQDPISLDTMN--IRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEAVNAT 97
+RY LP +DT L+ DA RKEA A+
Sbjct: 64 TIRYFILPDSLPLDTLLVDDAPKPKNKARKEAERAS 99
>gi|409044160|gb|EKM53642.1| hypothetical protein PHACADRAFT_260106 [Phanerochaete carnosa
HHB-10118-sp]
Length = 130
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S + K ++VELKN + G L + D ++NI L ++ T + DK+ +K
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSAEGDKF---WKLK 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRGS ++Y+++P +D
Sbjct: 58 ECYIRGSTIKYLRVPDQLLD 77
>gi|301779577|ref|XP_002925209.1| PREDICTED: u7 snRNA-associated Sm-like protein LSm10-like
[Ailuropoda melanoleuca]
gi|281344415|gb|EFB19999.1| hypothetical protein PANDA_014655 [Ailuropoda melanoleuca]
Length = 123
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L +++ TD ++ H +++ + F+ G
Sbjct: 20 LLQGLQGQVTTVDLRDESVARGRIDNVDAFMNIRLANVTYTD--RWGHRVALDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|242247021|ref|NP_001156271.1| U6 snRNA-associated Sm-like protein [Acyrthosiphon pisum]
gi|239790147|dbj|BAH71652.1| ACYPI008634 [Acyrthosiphon pisum]
Length = 134
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L + D ++NI L ++ T D D++ +
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVTCDSWMNINLREVICTSKDGDRF---WRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEV 80
C+IRGS+++Y+++P DE+
Sbjct: 58 ECYIRGSMIKYLRIP-DEI 75
>gi|70917773|ref|XP_732969.1| u6 snRNA-associated sm-like protein Lsm2 [Plasmodium chabaudi
chabaudi]
gi|56504331|emb|CAH75543.1| u6 snRNA-associated sm-like protein Lsm2, putative [Plasmodium
chabaudi chabaudi]
Length = 48
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 58 LSVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
LS+K+CF+RGSVVRYV LP +EV+ L+ R+EA
Sbjct: 1 LSIKSCFVRGSVVRYVFLPSNEVNIDKLRHMCRQEA 36
>gi|328876176|gb|EGG24539.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 162
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ G ++VELKN + G L + D ++NI + + T D DK+ ++
Sbjct: 1 MLPLSLLRTGQGHQIMVELKNGETYNGILVNCDNWMNINMRTVIRTSKDSDKF---WKLQ 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRG+ ++Y+ +P + +D
Sbjct: 58 GCYIRGNTIKYITVPDEIID 77
>gi|213401339|ref|XP_002171442.1| small nuclear ribonucleoprotein Sm D1 [Schizosaccharomyces
japonicus yFS275]
gi|211999489|gb|EEB05149.1| small nuclear ribonucleoprotein Sm D1 [Schizosaccharomyces
japonicus yFS275]
Length = 114
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + + +ELKN + GT+ SVD +N L + +T D+ P + ++ IRGS
Sbjct: 6 FLMKLTNETISIELKNGTIVNGTITSVDMQMNTHLKAVKMTVKDREP--VPLETLSIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
VRY LP +DT L+ D+ +
Sbjct: 64 NVRYFILPDSLPLDTLLIDDSPK 86
>gi|253735672|ref|NP_001156694.1| U6 snRNA-associated Sm-like protein [Acyrthosiphon pisum]
gi|239791415|dbj|BAH72178.1| ACYPI008634 [Acyrthosiphon pisum]
Length = 134
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L + D ++NI L ++ T D D++ +
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVTCDSWMNINLREVICTSKDGDRF---WRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEV 80
C+IRGS+++Y+++P DE+
Sbjct: 58 ECYIRGSMIKYLRIP-DEI 75
>gi|170041265|ref|XP_001848390.1| small nuclear ribonucleoprotein sm [Culex quinquefasciatus]
gi|167864864|gb|EDS28247.1| small nuclear ribonucleoprotein sm [Culex quinquefasciatus]
Length = 156
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 19 VVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQLP 76
+VELKN + G L S D ++NI L ++ T D DK+ M C+IRGS ++Y+++P
Sbjct: 3 LVELKNGETYNGHLVSCDTWMNINLREVICTSKDGDKFWRMPE---CYIRGSTIKYLRIP 59
Query: 77 GDEVD 81
+ +D
Sbjct: 60 DEVID 64
>gi|57096594|ref|XP_532561.1| PREDICTED: LSM10, U7 small nuclear RNA associated [Canis lupus
familiaris]
Length = 123
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L +++ TD ++ H + + + F+ G
Sbjct: 20 LLQGLQGQVTTVDLRDESVARGRIDNVDAFMNIRLANVTYTD--RWGHQVELDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|355700134|gb|AES01351.1| LSM10, U7 small nuclear RNA associated [Mustela putorius furo]
Length = 122
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L +++ TD ++ H + + + F+ G
Sbjct: 20 LLQGLQGQVTTVDLRDESVARGRIDNVDAFMNIRLANVTYTD--RWGHQVELDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|302762304|ref|XP_002964574.1| hypothetical protein SELMODRAFT_81834 [Selaginella
moellendorffii]
gi|300168303|gb|EFJ34907.1| hypothetical protein SELMODRAFT_81834 [Selaginella
moellendorffii]
Length = 90
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT-----DPDKYPHMLSVKN 62
S K+ G ++VELKN + G L S D ++NI L ++ T D D++ M
Sbjct: 5 SLLKTAHGHPMLVELKNGETYNGHLVSCDSWMNIHLREVICTSKASDDGDRFWRM---PE 61
Query: 63 CFIRGSVVRYVQLPGDEV 80
C+IRG+ ++Y+++P DEV
Sbjct: 62 CYIRGNTIKYLRVP-DEV 78
>gi|345486422|ref|XP_003425472.1| PREDICTED: 5'-nucleotidase domain-containing protein 1-like
[Nasonia vitripennis]
Length = 560
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 2 ERLLFYS----FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYP 55
ER FY+ K++ G+ V+L+N+ SI GT+ D Y+NI + D TDP D +
Sbjct: 11 ERYFFYNSLAILLKAVEGERTSVDLRNEASIYGTVEQADGYMNIVMKDCIFTDPRGDSFK 70
Query: 56 HMLSVKNCFIRGSVVRYVQLP 76
+ + F++ +RYV +P
Sbjct: 71 YEIF----FVQARNIRYVHIP 87
>gi|294944597|ref|XP_002784335.1| small nuclear ribonucleoprotein D1, putative [Perkinsus marinus
ATCC 50983]
gi|239897369|gb|EER16131.1| small nuclear ribonucleoprotein D1, putative [Perkinsus marinus
ATCC 50983]
Length = 114
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + L + V VELKN + GT+ VD +N + ++ VT + P + + + IRGS
Sbjct: 6 FLQKLNSETVTVELKNGTVVHGTVTGVDVSMNTHMKNVKVTVRGRNP--VGMDHLTIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP +DT L+ D + +A
Sbjct: 64 TIRYFILPDHIPLDTLLIDDGPKNKA 89
>gi|149694668|ref|XP_001499097.1| PREDICTED: u7 snRNA-associated Sm-like protein LSm10-like [Equus
caballus]
Length = 123
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L +++ TD ++ H + + + F+ G
Sbjct: 20 LLQGLQGQVTTVDLRDESVARGRIDNVDAFMNIRLANVTYTD--RWGHQVELDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|426328967|ref|XP_004025517.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10 [Gorilla
gorilla gorilla]
Length = 123
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L +++ T D++ H + + + F+ G
Sbjct: 20 LLQGLQGRVTTVDLRDESVAHGRIDNVDAFMNIRLANVTYT--DRWGHQVKLDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|355477275|ref|NP_001239058.1| U6 snRNA-associated Sm-like protein LSm4 isoform 2 [Homo sapiens]
gi|395750752|ref|XP_003779150.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 2
[Pongo abelii]
gi|397493883|ref|XP_003817825.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 2
[Pan paniscus]
gi|402904784|ref|XP_003915220.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 2
[Papio anubis]
gi|426387788|ref|XP_004060344.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4 isoform 2
[Gorilla gorilla gorilla]
gi|431922013|gb|ELK19186.1| U6 snRNA-associated Sm-like protein LSm4 [Pteropus alecto]
Length = 125
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELKN + G L S D ++NI L ++ T D DK+ M C+IRGS ++Y+++
Sbjct: 1 MLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PECYIRGSTIKYLRI 57
Query: 76 PGDEVD 81
P + +D
Sbjct: 58 PDEIID 63
>gi|344287217|ref|XP_003415351.1| PREDICTED: hypothetical protein LOC100665419 [Loxodonta africana]
Length = 258
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L +++ TD ++ H + + + F+ G
Sbjct: 20 LLQGLQGQVTTVDLRDESVARGRIDNVDAFMNIRLANVTYTD--RWGHQVELDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|321468738|gb|EFX79721.1| hypothetical protein DAPPUDRAFT_304272 [Daphnia pulex]
Length = 153
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT-DPDKYPHMLSVKNCFIRG 67
++L G+ VVEL+N++++ G + VD ++N+ L + +V + D++ H + F++
Sbjct: 20 LLQALEGRVAVVELRNEMAVKGLISQVDGFMNVSLQNATVQGNDDQHYHF---EEFFVKA 76
Query: 68 SVVRYVQLPGD 78
+RYVQ+P D
Sbjct: 77 RNIRYVQIPED 87
>gi|449443839|ref|XP_004139683.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
[Cucumis sativus]
Length = 88
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEV 80
C+IRG+ ++Y+++P DEV
Sbjct: 58 ECYIRGNTIKYLRVP-DEV 75
>gi|320168484|gb|EFW45383.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 131
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
F LV + V+VELKN + GT+ VD +N L ++ +T +K P +S++ I
Sbjct: 3 LVRFLMRLVSETVIVELKNGTVVQGTIVGVDHLMNTMLRNVKLTVKNKDP--VSLETLSI 60
Query: 66 RGSVVRYVQLPGD-EVDTQLLQDATRK 91
RG+ +R+ LP +D+ L+++ +K
Sbjct: 61 RGNNIRHYILPDSLPLDSLLIEEVPKK 87
>gi|428180768|gb|EKX49634.1| hypothetical protein GUITHDRAFT_151418 [Guillardia theta
CCMP2712]
Length = 117
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ +D +N L + +T +K P + ++ IRGS
Sbjct: 6 FLMKLNNETVTIELKNGSVVHGTIVGIDMAMNTHLKAVKLTMRNKTP--VPLEQLSIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEAVNAT 97
+RY LP + +DT L++DA + + A+
Sbjct: 64 NIRYYLLPDNLNLDTLLVEDAPKHKMGKAS 93
>gi|294950553|ref|XP_002786687.1| small nuclear ribonucleoprotein D1, putative [Perkinsus marinus
ATCC 50983]
gi|239900979|gb|EER18483.1| small nuclear ribonucleoprotein D1, putative [Perkinsus marinus
ATCC 50983]
Length = 114
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + L + V VELKN + GT+ VD +N + ++ VT + P + + + IRGS
Sbjct: 6 FLQKLNSETVTVELKNGTVVHGTVTGVDVSMNTHMKNVKVTVRGRNP--VGMDHLTIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP +DT L+ D + +A
Sbjct: 64 TIRYFILPDHIPLDTLLIDDGPKNKA 89
>gi|281343535|gb|EFB19119.1| hypothetical protein PANDA_000549 [Ailuropoda melanoleuca]
Length = 96
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 19 VVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQLP 76
+VELKN + G L S D ++NI L ++ T D DK+ M C+IRGS ++Y+++P
Sbjct: 2 LVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PECYIRGSTIKYLRIP 58
Query: 77 GDEVD 81
+ +D
Sbjct: 59 DEIID 63
>gi|255073675|ref|XP_002500512.1| predicted protein [Micromonas sp. RCC299]
gi|226515775|gb|ACO61770.1| predicted protein [Micromonas sp. RCC299]
Length = 159
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC----- 63
F ++LVG VV+E ++DV+ GTL VD+ +N L ++ L KN
Sbjct: 33 FVQALVGHLVVIETRDDVTTRGTLVEVDERMNCTLEGAQRVTVEQ---ALEKKNSKFDRM 89
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
F+R ++RYV +P VD L + R+E +A+R
Sbjct: 90 FVRARLIRYVHVPA-RVDPAELIERRRQEEFDASR 123
>gi|213406934|ref|XP_002174238.1| U6 snRNP-associated protein Lsm4 [Schizosaccharomyces japonicus
yFS275]
gi|212002285|gb|EEB07945.1| U6 snRNP-associated protein Lsm4 [Schizosaccharomyces japonicus
yFS275]
Length = 119
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + + G+ ++VELKN + G L D Y+N+ L ++ T P DK+ +
Sbjct: 1 MLPLTLLNAAQGRPILVELKNGETFNGHLEKCDNYMNLTLQEVIQTMPEGDKF---FRMP 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
C+IRG+ ++Y+++ + V+ Q + +E
Sbjct: 58 ECYIRGNNIKYLRVQDELVEQVAKQQSQHRE 88
>gi|156395605|ref|XP_001637201.1| predicted protein [Nematostella vectensis]
gi|156224311|gb|EDO45138.1| predicted protein [Nematostella vectensis]
Length = 137
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ ++VELKN + G L S D ++NI L ++ T D DK+ +
Sbjct: 2 VLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSRDGDKF---WKIP 58
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C++RGS ++Y+++P + +D
Sbjct: 59 ECYVRGSNIKYLRIPDEVID 78
>gi|71028592|ref|XP_763939.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350893|gb|EAN31656.1| hypothetical protein TP04_0304 [Theileria parva]
Length = 55
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 52 DKYPHMLSVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
D + ++LSV NCF+RGSVVRYV +++T+ LQ+ R++A+
Sbjct: 5 DSFLNLLSVVNCFVRGSVVRYVFFNPSDINTEELQELCRRQAM 47
>gi|255712429|ref|XP_002552497.1| KLTH0C06248p [Lachancea thermotolerans]
gi|238933876|emb|CAR22059.1| KLTH0C06248p [Lachancea thermotolerans CBS 6340]
Length = 175
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G+ +V+ELKN +I G L +VD ++N+ LTD++ T + + ++RG+ ++Y++
Sbjct: 12 GQQLVIELKNGETIVGQLTNVDNWMNLTLTDVTHTSASD---TVKLSEIYVRGNFIKYIK 68
Query: 75 LPGDEVD 81
L D ++
Sbjct: 69 LQDDVIE 75
>gi|268531626|ref|XP_002630940.1| C. briggsae CBR-SNR-3 protein [Caenorhabditis briggsae]
Length = 127
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L +S+T +K P + + IRG+
Sbjct: 6 FLMKLSHETVNIELKNGTQVSGTIMGVDVAMNTHLRAVSMTVKNKDP--VKLDTLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY+ LP +DT L+ D RK+
Sbjct: 64 NIRYIILPDPLALDTLLIDDEPRKK 88
>gi|126345432|ref|XP_001373339.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm4-like, partial
[Monodelphis domestica]
Length = 124
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 19 VVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQLP 76
+VELKN + G L S D ++NI L ++ T D DK+ M C+IRGS ++Y+++P
Sbjct: 1 LVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRM---PECYIRGSTIKYLRIP 57
Query: 77 GDEVD 81
+ +D
Sbjct: 58 DEIID 62
>gi|384489888|gb|EIE81110.1| hypothetical protein RO3G_05815 [Rhizopus delemar RA 99-880]
Length = 129
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L S + G ++VELK+ + G L + D ++N+ L ++ T P DK+ +
Sbjct: 1 MLPLSLLHTAAGHPMLVELKSGETFNGHLVNCDNWMNLTLREVIQTSPEGDKF---WRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C+IRG+ ++Y+ +P + VD
Sbjct: 58 ECYIRGNTIKYLNVPEEIVD 77
>gi|391339536|ref|XP_003744104.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Metaseiulus occidentalis]
Length = 116
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L S D ++NI L ++ T + DK+ +
Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSREGDKF---WRIP 57
Query: 62 NCFIRGSVVRYVQLPGDEV 80
C+IRG+ +R++++P DEV
Sbjct: 58 ECYIRGNTIRFLRIP-DEV 75
>gi|20270251|ref|NP_620046.1| U7 snRNA-associated Sm-like protein LSm10 [Mus musculus]
gi|253795523|ref|NP_001156738.1| U7 snRNA-associated Sm-like protein LSm10 [Mus musculus]
gi|52783143|sp|Q8QZX5.1|LSM10_MOUSE RecName: Full=U7 snRNA-associated Sm-like protein LSm10
gi|19354497|gb|AAH24543.1| U7 snRNP-specific Sm-like protein LSM10 [Mus musculus]
gi|20071449|gb|AAH26476.1| U7 snRNP-specific Sm-like protein LSM10 [Mus musculus]
gi|74228609|dbj|BAE25378.1| unnamed protein product [Mus musculus]
gi|148698363|gb|EDL30310.1| U7 snRNP-specific Sm-like protein LSM10 [Mus musculus]
Length = 122
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L +++ T D++ H + + + F+ G
Sbjct: 20 LLQGLQGQITTVDLRDESVARGRIDNVDAFMNIRLANVTYT--DRWGHQVELDDLFVTGR 77
Query: 69 VVRYVQLPGDEVD 81
VRYV +P D VD
Sbjct: 78 NVRYVHIP-DGVD 89
>gi|253745026|gb|EET01141.1| U6 snRNA-associated Sm-like protein LSm2, putative [Giardia
intestinalis ATCC 50581]
Length = 110
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPD-KYPHMLSVKN 62
+L+ +F LVG+ + VELK+ + + G L + D + N+ L + + P+ + H+ +
Sbjct: 1 MLYLTFLSKLVGRKIHVELKSGMQMHGVLLASDNFANLSLDNPVICGPNISFTHVSGGRR 60
Query: 63 CFIRGSVVRYVQL 75
FIRGS ++++ L
Sbjct: 61 VFIRGSSIQFLYL 73
>gi|449016184|dbj|BAM79586.1| similar to U6 snRNA-associated Sm-like protein [Cyanidioschyzon
merolae strain 10D]
gi|449020060|dbj|BAM83462.1| similar to U6 snRNA-associated Sm-like protein [Cyanidioschyzon
merolae strain 10D]
Length = 97
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + VG+ V VELKN G L VD ++N+ L VT + SV+
Sbjct: 1 MLPVGLVRGAVGQQVTVELKNGKHCTGVLTGVDPWMNLNLESARVTGASRAATTDSVEQA 60
Query: 64 ------FIRGSVVRYVQLP 76
IRG++++ VQLP
Sbjct: 61 ASYAALHIRGTMIKLVQLP 79
>gi|296415636|ref|XP_002837492.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633364|emb|CAZ81683.1| unnamed protein product [Tuber melanosporum]
Length = 249
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVKN 62
L S + G ++VELKN ++ G L + D ++N+ L ++ T P DK+ +
Sbjct: 117 LPLSLLNTAQGHPMLVELKNGETLNGHLVNCDTWMNLTLKEVVQTSPEGDKF---FRLAE 173
Query: 63 CFIRGSVVRYVQLPGDEVD 81
C++RG+ ++Y+++P + +D
Sbjct: 174 CYVRGNNIKYLRVPDEIID 192
>gi|115725270|ref|XP_001200318.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like
[Strongylocentrotus purpuratus]
gi|115896565|ref|XP_001200071.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like
[Strongylocentrotus purpuratus]
Length = 124
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPD-KYPHMLSVKNCFIRG 67
+++VG+ VEL+N+ S G + VD ++N+ ++ + + D + HM S+ FI+
Sbjct: 20 LLRAVVGRITTVELRNECSATGYVVDVDGFMNVTMSKVLFVNMDGEKTHMDSI---FIQA 76
Query: 68 SVVRYVQLPGD 78
S+VRYVQ+P D
Sbjct: 77 SLVRYVQIPDD 87
>gi|56757161|gb|AAW26752.1| SJCHGC06377 protein [Schistosoma japonicum]
gi|226490214|emb|CAX69349.1| putative U6 snRNA-associated Sm-like protein LSm4 [Schistosoma
japonicum]
Length = 128
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELK+ + G L + D ++NI L ++ T D D++ M C+IRGS+++Y+++
Sbjct: 1 MLVELKSGETYNGHLVACDDWMNIHLKEVICTSRDGDRFWKM---PECYIRGSIIKYLRI 57
Query: 76 PGDEVDT-----QLLQDATRKEAVNATR 98
P D +D QL + R ++ + R
Sbjct: 58 PDDVIDKVKEDLQLAKMRNRSQSADTGR 85
>gi|392560868|gb|EIW54050.1| Sm-like ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 161
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
+E L S + K ++VELKN + G L + D ++NI L + T + +
Sbjct: 28 IEAGLPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREAYQTSAEG-DRFWKL 86
Query: 61 KNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
K C+IRGS ++Y+++P +D + +EA + R
Sbjct: 87 KECYIRGSTIKYLRVPDTLLDAVKDEQNRAREAGRSAR 124
>gi|389613644|dbj|BAM20150.1| unknown unsecreted protein [Papilio xuthus]
Length = 173
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 11 KSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVV 70
KSL G+ V V+L+ND ++CG L +VD ++N+ + DP +N F++ V
Sbjct: 63 KSLQGQYVNVDLRNDSNVCGLLLTVDGFMNLSFSTAVYCDPQGNEFFF--ENIFVQCRNV 120
Query: 71 RYVQLP 76
RYV +P
Sbjct: 121 RYVHIP 126
>gi|308158887|gb|EFO61447.1| U6 snRNA-associated Sm-like protein LSm2, putative [Giardia
lamblia P15]
Length = 107
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPD-KYPHMLSVKN 62
+L+ +F LVG+ + VELK+ + I G L + D + N+ L + + + + H+ S +
Sbjct: 1 MLYLTFLSKLVGRKIHVELKSGMQIHGILLASDNFANLSLDNPVIYGSNITFTHVSSGQR 60
Query: 63 CFIRGSVVRYVQLPGDEVDTQL 84
FIRGS ++++ L E D L
Sbjct: 61 IFIRGSAIQFLYLNDVEDDESL 82
>gi|383872886|ref|NP_001244887.1| U7 snRNA-associated Sm-like protein LSm10 [Macaca mulatta]
gi|402853951|ref|XP_003891651.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10 [Papio
anubis]
gi|355557828|gb|EHH14608.1| hypothetical protein EGK_00564 [Macaca mulatta]
gi|355745143|gb|EHH49768.1| hypothetical protein EGM_00483 [Macaca fascicularis]
gi|380817368|gb|AFE80558.1| U7 snRNA-associated Sm-like protein LSm10 [Macaca mulatta]
gi|383422299|gb|AFH34363.1| U7 snRNA-associated Sm-like protein LSm10 [Macaca mulatta]
Length = 123
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L ++ TD ++ H + + + F+ G
Sbjct: 20 LLQGLQGRVTTVDLRDESVAHGRIDNVDAFMNIRLAKVTYTD--RWGHQVKLDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|358058113|dbj|GAA96092.1| hypothetical protein E5Q_02753 [Mixia osmundae IAM 14324]
Length = 123
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
S ++ +GK ++VELKN + G L D ++N+ L ++ T + + C+++G
Sbjct: 5 SLLQAALGKPMLVELKNGETFNGHLSGADNFMNLTLKEVYQTSANG-DQFWKLPECYLKG 63
Query: 68 SVVRYVQLPGDEVDTQLLQDA 88
+++YV++ + +DT Q+A
Sbjct: 64 HMIKYVRVADNVLDTVKEQEA 84
>gi|321254335|ref|XP_003193040.1| hypothetical protein CGB_C7440C [Cryptococcus gattii WM276]
gi|317459509|gb|ADV21253.1| hypothetical protein CNBC2050 [Cryptococcus gattii WM276]
Length = 141
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + GK ++VELKN V+ G L D ++N+ L ++ T D +K
Sbjct: 1 MLPLSLLTAAQGKPMLVELKNGVTFNGHLVECDTFMNVTLREVYQTSADG-ERFWKMKEM 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
FI+G++++Y ++ D++ Q + + A N
Sbjct: 60 FIKGNIIKYFRI-ADDILEQAAAEQDKARAAN 90
>gi|294881583|ref|XP_002769420.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239872829|gb|EER02138.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 137
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G+ ++VELKN + G L + D ++N+ + D +T D D++ +
Sbjct: 2 VLPMSLLKTAQGQPIMVELKNGEAYSGVLANCDSWMNLHIRDAVLTSKDGDRF---WKLA 58
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATR 90
+IRG+ ++Y+++P VD + +DA R
Sbjct: 59 EAYIRGNHIKYLRIPDGVVDM-VQEDAIR 86
>gi|392579756|gb|EIW72883.1| hypothetical protein TREMEDRAFT_24586, partial [Tremella
mesenterica DSM 1558]
Length = 104
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
GK ++VELKN V+ G L D ++N+ L ++ T D +K FI+G++++Y +
Sbjct: 11 GKPMLVELKNGVTFNGHLVECDNFMNVTLREVYQTSADG-ERFWKMKEVFIKGNIIKYFR 69
Query: 75 LPGDEVDTQLLQDATRKEAV 94
+ +D+ Q + A
Sbjct: 70 IADAILDSAFEQQEKNRAAA 89
>gi|336372413|gb|EGO00752.1| hypothetical protein SERLA73DRAFT_121184 [Serpula lacrymans var.
lacrymans S7.3]
gi|336385171|gb|EGO26318.1| hypothetical protein SERLADRAFT_367910 [Serpula lacrymans var.
lacrymans S7.9]
Length = 115
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + K ++VELKN + G L + D ++NI L ++ T + ++ C
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSAEG-DRFWKLREC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
+IRGS ++Y+++P DT L DA + E A
Sbjct: 60 YIRGSTIKYLRVP----DT--LLDAVKDEQTRA 86
>gi|332248350|ref|XP_003273327.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10 [Nomascus
leucogenys]
Length = 123
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L ++ TD ++ H + + + F+ G
Sbjct: 20 LLQGLQGRVTTVDLRDESVAHGRIDNVDAFMNIRLAKVTYTD--RWGHQVELDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|342874370|gb|EGU76384.1| hypothetical protein FOXB_13062 [Fusarium oxysporum Fo5176]
Length = 123
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P +S++ IRGS
Sbjct: 6 FLMKCANETVTIELKNGTIVHGTISSVSPQMNTALRTVKMTIKGQEP--ISLETMNIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ DA RKEA
Sbjct: 64 TIRYFILPDSLPLDTLLIDDAPKPKNKARKEA 95
>gi|313226324|emb|CBY21468.1| unnamed protein product [Oikopleura dioica]
gi|313241294|emb|CBY33571.1| unnamed protein product [Oikopleura dioica]
Length = 127
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L ++ +T + P L IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVVGTIAGVDICMNTHLKNVRLTVKGREPQQLDA--LSIRGN 63
Query: 69 VVRYVQLPGDEV--DTQLLQDATRKEAVNATR 98
+RY LP D V DT L+ D + +TR
Sbjct: 64 NIRYYILP-DSVPLDTLLIDDGPKARGGGSTR 94
>gi|19115525|ref|NP_594613.1| Sm snRNP core protein Smd1 [Schizosaccharomyces pombe 972h-]
gi|12230564|sp|O42661.1|SMD1_SCHPO RecName: Full=Small nuclear ribonucleoprotein Sm D1; Short=Sm-D1;
AltName: Full=snRNP core protein D1
gi|2664241|emb|CAA15826.1| Sm snRNP core protein Smd1 [Schizosaccharomyces pombe]
Length = 117
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ SVD +N L + +T + P + V+ IRG+
Sbjct: 6 FLMKLTNETVSIELKNGTIVHGTITSVDMQMNTHLKAVKMTVKGREP--VPVETLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP +DT L+ D+T+
Sbjct: 64 NIRYYILPDSLPLDTLLIDDSTK 86
>gi|154337565|ref|XP_001565015.1| putative small nuclear ribonucleoprotein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062054|emb|CAM45146.1| putative small nuclear ribonucleoprotein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 103
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
+F + L G V +ELKN + G + VD +N ++ + +T K P + V+ +RG
Sbjct: 15 TFLQHLRGTLVEIELKNASIVSGEIAYVDANMNTYMSHVKITSKGKNP--VEVEEYMVRG 72
Query: 68 SVVRYVQLPGDEVDTQLLQDATRKE 92
S +RY+ LP +L+ A+ K+
Sbjct: 73 STIRYIILPESLNTYDVLKQASAKK 97
>gi|351714204|gb|EHB17123.1| U7 snRNA-associated Sm-like protein LSm10 [Heterocephalus glaber]
Length = 123
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L ++ TD ++ H + + + FI G
Sbjct: 20 LLQGLQGQVTSVDLRDESVAHGRIDNVDAFMNIRLAKVTYTD--RWGHQVKLDDLFITGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|14249632|ref|NP_116270.1| U7 snRNA-associated Sm-like protein LSm10 [Homo sapiens]
gi|332808451|ref|XP_513319.2| PREDICTED: LSM10, U7 small nuclear RNA associated [Pan
troglodytes]
gi|397482876|ref|XP_003812641.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10 [Pan
paniscus]
gi|20177959|sp|Q969L4.1|LSM10_HUMAN RecName: Full=U7 snRNA-associated Sm-like protein LSm10
gi|15788234|gb|AAL07689.1|AF394685_1 U7 snRNA-associated Sm-like protein LSM10 [Homo sapiens]
gi|14043264|gb|AAH07623.1| LSM10, U7 small nuclear RNA associated [Homo sapiens]
gi|119627772|gb|EAX07367.1| LSM10, U7 small nuclear RNA associated [Homo sapiens]
gi|307683145|dbj|BAJ21189.1| LSM10, U7 small nuclear RNA associated [synthetic construct]
gi|410214430|gb|JAA04434.1| LSM10, U7 small nuclear RNA associated [Pan troglodytes]
gi|410259918|gb|JAA17925.1| LSM10, U7 small nuclear RNA associated [Pan troglodytes]
gi|410291414|gb|JAA24307.1| LSM10, U7 small nuclear RNA associated [Pan troglodytes]
gi|410328355|gb|JAA33124.1| LSM10, U7 small nuclear RNA associated [Pan troglodytes]
Length = 123
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L ++ TD ++ H + + + F+ G
Sbjct: 20 LLQGLQGRVTTVDLRDESVAHGRIDNVDAFMNIRLAKVTYTD--RWGHQVKLDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|33337945|gb|AAQ13594.1|AF166092_1 MSTP074 [Homo sapiens]
Length = 123
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L ++ TD ++ H + + + F+ G
Sbjct: 20 LLQGLQGRVTTVDLRDESVAHGRIDNVDAFMNIRLAKVTYTD--RWGHQVKLDDLFVTGP 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|297665481|ref|XP_002811089.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10 isoform 1
[Pongo abelii]
Length = 123
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L ++ TD ++ H + + + F+ G
Sbjct: 20 LLQGLQGRVTTVDLRDESVAHGRIDNVDAFMNIRLAKVTYTD--RWGHQVKLDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|116192449|ref|XP_001222037.1| hypothetical protein CHGG_05942 [Chaetomium globosum CBS 148.51]
gi|88181855|gb|EAQ89323.1| hypothetical protein CHGG_05942 [Chaetomium globosum CBS 148.51]
Length = 125
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L ++ +T + P L N +RGS
Sbjct: 6 FLMKCANETVTIELKNGTIVHGTIASVSPQMNTALRNVKMTPRGQEPIHLETLN--VRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ DA RKEA
Sbjct: 64 TIRYFILPDSLPLDTLLIDDAPKPKNKARKEA 95
>gi|405118247|gb|AFR93021.1| pre-mRNA splicing factor [Cryptococcus neoformans var. grubii
H99]
Length = 129
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT---DPDKYPHMLSVKNCFI 65
F L + V +ELKN I GT+ SVD +N L + +T P P LS+ + I
Sbjct: 6 FLMKLNNETVTIELKNGTVIHGTITSVDPQMNTHLKSVKLTLRSQPSSQPP-LSLDSIAI 64
Query: 66 RGSVVRYVQLPGD-EVDTQLLQDA 88
RG+ +RY LP +DT L+ DA
Sbjct: 65 RGNNIRYFILPDSLPLDTLLVDDA 88
>gi|157822899|ref|NP_001102446.1| U7 snRNA-associated Sm-like protein LSm10 [Rattus norvegicus]
gi|149023943|gb|EDL80440.1| similar to U7 snRNP-specific Sm-like protein LSM10, isoform CRA_a
[Rattus norvegicus]
gi|149023944|gb|EDL80441.1| similar to U7 snRNP-specific Sm-like protein LSM10, isoform CRA_a
[Rattus norvegicus]
gi|149023945|gb|EDL80442.1| similar to U7 snRNP-specific Sm-like protein LSM10, isoform CRA_a
[Rattus norvegicus]
gi|187469116|gb|AAI66902.1| Lsm10 protein [Rattus norvegicus]
Length = 122
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L +++ T D++ H + + + F+ G
Sbjct: 20 LLQGLQGQITTVDLRDESVARGRIDNVDAFMNIRLANVTYT--DRWGHQVELDDLFVTGR 77
Query: 69 VVRYVQLP 76
VRYV +P
Sbjct: 78 NVRYVHIP 85
>gi|193659802|ref|XP_001948103.1| PREDICTED: hypothetical protein LOC100165287 isoform 1
[Acyrthosiphon pisum]
Length = 139
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
KS+ + ++L+N+ S+ G + VD +N+ L D++VTDP+ + S N F++
Sbjct: 19 LVKSVENQYTTIDLQNETSVYGLVKEVDCDMNVTLCDVTVTDPNGQRY--SCDNFFLKSR 76
Query: 69 VVRYVQLPGDEVDT-QLLQDATRK 91
++RYV L VD Q+++D RK
Sbjct: 77 LIRYVHL-SQTVDVFQVMKDVIRK 99
>gi|449300793|gb|EMC96805.1| hypothetical protein BAUCODRAFT_122769 [Baudoinia compniacensis
UAMH 10762]
Length = 125
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L + D Y+N+ L ++ T P DK+ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDTYMNLTLKEVVQTSPEGDKF---FRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
C++RG+ ++Y+++P + VD
Sbjct: 58 ECYVRGNNIKYLRVPDEIVD 77
>gi|62858991|ref|NP_001016243.1| LSM10, U7 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
gi|89267482|emb|CAJ81542.1| LSM10, U7 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
gi|189441581|gb|AAI67319.1| LOC548997 protein [Xenopus (Silurana) tropicalis]
Length = 121
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G VEL+++ S GT+ +VD ++NI+L VT D+ + + FI G
Sbjct: 20 LLQGLHGHVTTVELRDESSATGTITNVDAFMNIRLA--KVTYRDRRERETELDDLFITGR 77
Query: 69 VVRYVQLPGDEVD 81
+RYV +P +EVD
Sbjct: 78 NIRYVHIP-EEVD 89
>gi|405955862|gb|EKC22801.1| U7 snRNA-associated Sm-like protein LSm10 [Crassostrea gigas]
Length = 148
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
R S K++ G VEL+N+ ++ G + +VD ++NI + D+ H S +
Sbjct: 11 RNTLISLLKAVEGMVTTVELRNENAVTGLIQNVDPFMNIVMEDVVFKSYRGISHNFS--S 68
Query: 63 CFIRGSVVRYVQLPGDEVD 81
F++G +RYV +P DE+D
Sbjct: 69 FFVQGMNIRYVHIP-DEID 86
>gi|431891086|gb|ELK01963.1| U7 snRNA-associated Sm-like protein LSm10 [Pteropus alecto]
Length = 123
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L ++ TD ++ H + + F+ G
Sbjct: 20 LLQGLQGQVTTVDLRDESVAHGRIDNVDAFMNIRLAKVTYTD--RWGHQAELDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|240275971|gb|EER39484.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325093332|gb|EGC46642.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 124
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 1 MLPLGLLAAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTSPEG-DRFFRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
++RG+ ++Y+++P + VD L +D + ++ N TR
Sbjct: 60 YVRGNNIKYLRVPEEVVD--LAKDQQQNQSSNRTR 92
>gi|384246803|gb|EIE20292.1| hypothetical protein COCSUDRAFT_58002 [Coccomyxa subellipsoidea
C-169]
Length = 144
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F ++L G +VVVEL ND + G L S D+ +N+ + + + F++G+
Sbjct: 17 FVQALEGLNVVVELHNDAVVRGMLESADEGMNMIINGATYEPLQGSAQAMDF--LFVKGA 74
Query: 69 VVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
+RYV LP ++D +KEA A R
Sbjct: 75 RIRYVHLPAKMNAATRVED-KQKEAAEARR 103
>gi|448082775|ref|XP_004195217.1| Piso0_005764 [Millerozyma farinosa CBS 7064]
gi|359376639|emb|CCE87221.1| Piso0_005764 [Millerozyma farinosa CBS 7064]
Length = 129
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
M+ + F F + + V +ELKN SI G + S +NI + ++ + P + P +L
Sbjct: 1 MKLVRFLMNFSNYTSQPVTLELKNGSSINGQILSCSPSMNISMKNVKLIRPHQDPQLLQY 60
Query: 61 KNCFIRGSVVRYVQLPGD-EVDTQLLQDA 88
N IRG+ +R V LP D +D+ L + A
Sbjct: 61 MN--IRGNQIRLVILPDDLNIDSVLAKSA 87
>gi|449672414|ref|XP_002167952.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like [Hydra
magnipapillata]
Length = 128
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELKN + G L + D ++NI L ++ T D D++ M C+IRGS ++Y+++
Sbjct: 16 MLVELKNGETYNGHLVTCDNWMNINLREVICTSRDGDRFWRM---SQCYIRGSTIKYLRI 72
Query: 76 PGDEVDTQLLQDATRKE 92
P DEV + +D R +
Sbjct: 73 P-DEVIDMVKEDIQRNK 88
>gi|209875591|ref|XP_002139238.1| small nuclear ribonucleoprotein Sm D1 [Cryptosporidium muris
RN66]
gi|209554844|gb|EEA04889.1| small nuclear ribonucleoprotein Sm D1, putative [Cryptosporidium
muris RN66]
Length = 114
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F LV VV+ELKN + GT+ +VD +N L ++ ++ + P +S+ +RGS
Sbjct: 6 FLMKLVNNSVVIELKNGTIVQGTIVNVDMAMNTYLKNVKMSVKQRNP--ISLLQLTVRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA 88
+RY LP +DT L+ D
Sbjct: 64 TIRYFILPDSLPLDTLLIDDT 84
>gi|123485483|ref|XP_001324496.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121907380|gb|EAY12273.1| hypothetical protein TVAG_160790 [Trichomonas vaginalis G3]
Length = 111
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + LV + V VELK++ I GT+ VD +N L + + P + L +N IRG+
Sbjct: 6 FLRKLVRETVTVELKDNTVIKGTVVGVDSAMNTHLRLVHIKAPGQEEKRL--ENLTIRGA 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRK 91
+RYV LP +DT L+ D+ K
Sbjct: 64 SIRYVILPDVLNLDTLLVDDSPTK 87
>gi|399218474|emb|CCF75361.1| unnamed protein product [Babesia microti strain RI]
Length = 122
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L + ++ G ++VELKN + G L + D ++N+ + ++ T + DK+ +
Sbjct: 2 VLPLTLLRTAQGHPMLVELKNGETCSGILTTCDGFMNLHMRNVVRTSREGDKF---WKIN 58
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAV 94
CF+RG+ ++ V+LP D+V L ++ +R+E +
Sbjct: 59 ECFVRGNNLKSVRLP-DQV-ANLAEEESRREQL 89
>gi|17533617|ref|NP_495514.1| Protein LSM-4 [Caenorhabditis elegans]
gi|12230257|sp|Q19952.1|LSM4_CAEEL RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4
gi|351065126|emb|CCD66279.1| Protein LSM-4 [Caenorhabditis elegans]
Length = 123
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S K+ ++VELKN + G L + D ++NI L D+ T D DK+ + ++
Sbjct: 6 SLLKTAQNHPMLVELKNGETYNGHLKACDSWMNIHLVDVIFTSKDGDKF---FKMSEAYV 62
Query: 66 RGSVVRYVQLPGDEVD 81
RGS ++Y+++P VD
Sbjct: 63 RGSTIKYLRIPETVVD 78
>gi|294866382|ref|XP_002764688.1| Small nuclear ribonucleoprotein Sm D1, putative [Perkinsus
marinus ATCC 50983]
gi|239864378|gb|EEQ97405.1| Small nuclear ribonucleoprotein Sm D1, putative [Perkinsus
marinus ATCC 50983]
Length = 349
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S K+ G+ ++VELKN + G L + D ++N+ + D +T D +
Sbjct: 2 VLPMSLLKTAQGQPIMVELKNGEAYSGVLANCDSWMNLHIRDAVLTSKDG-DRFWKLAEA 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATR 90
+IRG+ ++Y+++P VD + +DA R
Sbjct: 61 YIRGNHIKYLRIPDGVVD-MVQEDAIR 86
>gi|448087362|ref|XP_004196309.1| Piso0_005764 [Millerozyma farinosa CBS 7064]
gi|359377731|emb|CCE86114.1| Piso0_005764 [Millerozyma farinosa CBS 7064]
Length = 129
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
M+ + F F + + V +ELKN SI G + S +NI + ++ + P + P +L
Sbjct: 1 MKLVRFLMNFSNYTSQPVTLELKNGSSINGQILSCSPSMNISMKNVKLIRPHQDPQLLQY 60
Query: 61 KNCFIRGSVVRYVQLPGD-EVDTQLLQDA 88
N IRG+ +R V LP D +D+ L + A
Sbjct: 61 MN--IRGNQIRLVILPDDLNIDSVLAKSA 87
>gi|268562665|ref|XP_002646730.1| C. briggsae CBR-LSM-4 protein [Caenorhabditis briggsae]
Length = 124
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S K+ ++VELKN + G L + D ++NI L D+ T D DK+ + ++
Sbjct: 6 SLLKTAQNHPMLVELKNGETYNGHLKACDAWMNIHLVDVIFTSKDGDKF---FKMSEAYV 62
Query: 66 RGSVVRYVQLPGDEVD 81
RGS ++Y+++P VD
Sbjct: 63 RGSTIKYLRIPETVVD 78
>gi|308503320|ref|XP_003113844.1| CRE-LSM-4 protein [Caenorhabditis remanei]
gi|308263803|gb|EFP07756.1| CRE-LSM-4 protein [Caenorhabditis remanei]
Length = 123
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S K+ ++VELKN + G L + D ++NI L D+ T D DK+ + ++
Sbjct: 6 SLLKTAQNHPMLVELKNGETYNGHLKACDAWMNIHLVDVIFTSKDGDKF---FKMSEAYV 62
Query: 66 RGSVVRYVQLPGDEVD 81
RGS ++Y+++P VD
Sbjct: 63 RGSTIKYLRIPETVVD 78
>gi|225563373|gb|EEH11652.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 124
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTSPEG-DRFFRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
++RG+ ++Y+++P + VD L +D + ++ N TR
Sbjct: 60 YVRGNNIKYLRVPEEVVD--LAKDQQQNQSSNRTR 92
>gi|154281997|ref|XP_001541811.1| hypothetical protein HCAG_03909 [Ajellomyces capsulatus NAm1]
gi|150411990|gb|EDN07378.1| hypothetical protein HCAG_03909 [Ajellomyces capsulatus NAm1]
Length = 124
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTSPEG-DRFFRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
++RG+ ++Y+++P + VD L +D + ++ N TR
Sbjct: 60 YVRGNNIKYLRVPEEVVD--LAKDQQQNQSSNRTR 92
>gi|254578406|ref|XP_002495189.1| ZYRO0B05456p [Zygosaccharomyces rouxii]
gi|238938079|emb|CAR26256.1| ZYRO0B05456p [Zygosaccharomyces rouxii]
Length = 143
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 20/91 (21%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP-------------- 51
+F K L + V VELKN ++ GTL +V +N LTD+ ++ P
Sbjct: 5 LVNFLKKLRNEQVTVELKNGTTVWGTLQTVSPQMNATLTDVRLSLPRSTSNSSTLASVYL 64
Query: 52 ------DKYPHMLSVKNCFIRGSVVRYVQLP 76
P S++ IRGS +R + LP
Sbjct: 65 SDGSLSQNEPSTTSLQYINIRGSTIRQIILP 95
>gi|341899817|gb|EGT55752.1| CBN-LSM-4 protein [Caenorhabditis brenneri]
Length = 123
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S K+ ++VELKN + G L + D ++NI L D+ T D DK+ + ++
Sbjct: 6 SLLKTAQNHPMLVELKNGETYNGHLKACDAWMNIHLVDVIFTSKDGDKF---FKMSEAYV 62
Query: 66 RGSVVRYVQLPGDEVD 81
RGS ++Y+++P VD
Sbjct: 63 RGSTIKYLRIPETVVD 78
>gi|66803220|ref|XP_635453.1| hypothetical protein DDB_G0291015 [Dictyostelium discoideum AX4]
gi|74851581|sp|Q54F84.1|Y1015_DICDI RecName: Full=Putative uncharacterized protein DDB_G0291015
gi|60463760|gb|EAL61938.1| hypothetical protein DDB_G0291015 [Dictyostelium discoideum AX4]
Length = 137
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 10 FKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPD-KYPHMLSVKNCFIRGS 68
F +L G + ++L+++ I GT+ +VD YLNI+L+D +T+ K V+ I+
Sbjct: 35 FTALRGTQITIQLRSNCEIYGTITNVDAYLNIELSDAKLTNTRYKNKRDEHVQEILIQSR 94
Query: 69 VVRYVQLPGDEVD 81
+R++Q+P D++D
Sbjct: 95 NIRFIQIP-DKID 106
>gi|358054612|dbj|GAA99538.1| hypothetical protein E5Q_06239 [Mixia osmundae IAM 14324]
Length = 160
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN S+ GT+ VD +N+ L + +T + P S+ IRG+
Sbjct: 6 FLMKLNNETVSIELKNGTSVGGTITGVDVAMNMHLKAVKMTVKNNEPQ--SLDTLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA 88
+RYV LP +DT L+ D
Sbjct: 64 NIRYVILPDSLPLDTLLIDDG 84
>gi|67615310|ref|XP_667428.1| small nuclear ribonucleoprotein smd1 [Cryptosporidium hominis
TU502]
gi|54658569|gb|EAL37203.1| small nuclear ribonucleoprotein smd1 [Cryptosporidium hominis]
Length = 126
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L+ VV+ELKN I GT+ SVD +N L ++ ++ + P +S+ +RG+
Sbjct: 6 FLMKLINNSVVIELKNGTIIQGTIVSVDMSMNTYLKNVKMSVKHRNP--VSLSQITVRGN 63
Query: 69 VVRYVQLPGDEVDTQLLQDATRKE 92
+RY LP LL D T K+
Sbjct: 64 TIRYFILPDSLPLDALLIDDTPKQ 87
>gi|322693984|gb|EFY85827.1| small nuclear ribonucleoprotein Sm D1 [Metarhizium acridum CQMa
102]
gi|322708999|gb|EFZ00576.1| small nuclear ribonucleoprotein Sm D1 [Metarhizium anisopliae
ARSEF 23]
Length = 121
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P L N IRGS
Sbjct: 6 FLMKCANETVTIELKNGTIVHGTISSVSPQMNTALRTVKMTPRGQDPISLDTMN--IRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ DA RKEA
Sbjct: 64 TIRYFILPDSLPLDTLLIDDAPKPKNKARKEA 95
>gi|391338956|ref|XP_003743819.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm4-like
[Metaseiulus occidentalis]
Length = 116
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ ++VELKN + G L S D ++NI L ++ T + DK+ +
Sbjct: 1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSREGDKF---WRIP 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQD 87
C++RG+ +R++++P DEV + +D
Sbjct: 58 ECYVRGNTIRFLRIP-DEVIEMVKED 82
>gi|330793030|ref|XP_003284589.1| hypothetical protein DICPUDRAFT_22541 [Dictyostelium purpureum]
gi|325085503|gb|EGC38909.1| hypothetical protein DICPUDRAFT_22541 [Dictyostelium purpureum]
Length = 116
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 10/75 (13%)
Query: 10 FKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTD---PDKYPHMLSVKNCFIR 66
F +L G + ++L+++ I GT+ +VD++LNI+L D ++T+ DKY +L ++
Sbjct: 22 FLALKGTQITIQLRSNCEIYGTIENVDRHLNIELIDATITNRFGKDKYELLL------VQ 75
Query: 67 GSVVRYVQLPGDEVD 81
+RY+ +P D++D
Sbjct: 76 SRNIRYIHIP-DKID 89
>gi|452845143|gb|EME47076.1| hypothetical protein DOTSEDRAFT_124881, partial [Dothistroma
septosporum NZE10]
Length = 126
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G ++VELK ++ G L + D Y+NI L ++ T PD + C++RG+ ++Y++
Sbjct: 12 GHPMLVELKTGETLNGHLVACDTYMNITLKEVVQTSPDG-DKFFRLPECYVRGNNIKYLR 70
Query: 75 LPGDEVDT 82
+P + VD
Sbjct: 71 VPDEVVDA 78
>gi|392589390|gb|EIW78721.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 125
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P S+ + IRG+
Sbjct: 6 FLMKLNNETVSIELKNGSVVNGTITGVDMQMNTHLKTVKMTARNRDPT--SLDSLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY+ LP +DT L+ DA + +A
Sbjct: 64 NIRYIVLPDALPLDTLLVDDAPKPKA 89
>gi|324021707|ref|NP_001191202.1| U6 snRNA-associated Sm-like protein LSm2 isoform 3 [Mus musculus]
gi|148694760|gb|EDL26707.1| LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_e [Mus musculus]
Length = 85
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/22 (95%), Positives = 22/22 (100%)
Query: 5 LFYSFFKSLVGKDVVVELKNDV 26
LFYSFFKSLVGKDVVVELKND+
Sbjct: 38 LFYSFFKSLVGKDVVVELKNDL 59
>gi|242022404|ref|XP_002431630.1| small nuclear ribonucleoprotein sm D1, putative [Pediculus
humanus corporis]
gi|212516938|gb|EEB18892.1| small nuclear ribonucleoprotein sm D1, putative [Pediculus
humanus corporis]
Length = 122
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T +K P ML + IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTITGVDVAMNTHLKAVKMTIKNKEPVML--ETLTIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP ++T L+ D + +A
Sbjct: 64 NIRYFILPDSLPLETLLIDDTPKSKA 89
>gi|139948936|ref|NP_001077250.1| U7 snRNA-associated Sm-like protein LSm10 [Bos taurus]
gi|426215182|ref|XP_004001853.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10 [Ovis aries]
gi|134024772|gb|AAI34670.1| LSM10 protein [Bos taurus]
gi|296488939|tpg|DAA31052.1| TPA: LSM10, U7 small nuclear RNA associated [Bos taurus]
gi|440908593|gb|ELR58596.1| U7 snRNA-associated Sm-like protein LSm10 [Bos grunniens mutus]
Length = 122
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L ++ T D++ H + + + F+ G
Sbjct: 20 LLQGLQGQVTTVDLRDESVAHGRIDNVDAFMNIRLAQVTYT--DRWGHQVELDDLFVTGR 77
Query: 69 VVRYVQLP 76
VRYV +P
Sbjct: 78 NVRYVHIP 85
>gi|430813206|emb|CCJ29431.1| unnamed protein product [Pneumocystis jirovecii]
Length = 639
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G ++VELKN + G + S D ++N+ L ++ T+ D + C+IRGS ++Y++
Sbjct: 521 GYPMLVELKNGETYNGHMVSCDTWMNLILKEVIQTNADG-DRFFRLSECYIRGSTIKYLR 579
Query: 75 LPGDEVDTQLLQDATRKE 92
+P + ++ LQ+ ++
Sbjct: 580 IPDEIINIVKLQNEQNRD 597
>gi|367020776|ref|XP_003659673.1| hypothetical protein MYCTH_2296998 [Myceliophthora thermophila
ATCC 42464]
gi|347006940|gb|AEO54428.1| hypothetical protein MYCTH_2296998 [Myceliophthora thermophila
ATCC 42464]
Length = 118
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L ++ +T + P L N +RGS
Sbjct: 6 FLMKCANETVTIELKNGTIVHGTIASVSPQMNTALRNVKMTPRGQDPIPLETLN--VRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ DA RKEA
Sbjct: 64 TIRYFILPDSLPLDTLLIDDAPKPKNKARKEA 95
>gi|452821316|gb|EME28348.1| small nuclear ribonucleoprotein D1 [Galdieria sulphuraria]
Length = 122
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V VELKN + GT+ VD +N L + +T K P L + +RGS
Sbjct: 6 FLMKLNSETVTVELKNGTVVQGTVTGVDHNMNTTLKAVKMTPRGKNPVTLDAMS--LRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP VD+ L+ D+ R
Sbjct: 64 TIRYFILPESLNVDSLLVDDSIRPRG 89
>gi|154297620|ref|XP_001549236.1| hypothetical protein BC1G_12655 [Botryotinia fuckeliana B05.10]
gi|347842491|emb|CCD57063.1| hypothetical protein [Botryotinia fuckeliana]
Length = 137
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN I GT+ SV +N L + +T + L V N +RGS
Sbjct: 6 FLMKCANETVTIELKNGTIIHGTITSVSPQMNTALRTVKMTPKNGTSLTLDVIN--LRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEAVNAT 97
+RY LP +DT L+ DA RKEA T
Sbjct: 64 TIRYYILPDSLPLDTLLIDDAPKPKNKARKEAAGTT 99
>gi|410966946|ref|XP_003989986.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10 [Felis catus]
Length = 244
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L +++ TD ++ H + + + F+ G
Sbjct: 141 LLQGLQGQVTTVDLRDESVARGRIDNVDAFMNIRLANVTYTD--RWGHQVELDDLFVTGR 198
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 199 NVRYVHIPDD 208
>gi|255075581|ref|XP_002501465.1| predicted protein [Micromonas sp. RCC299]
gi|226516729|gb|ACO62723.1| predicted protein [Micromonas sp. RCC299]
Length = 117
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + L + V +ELKN I GT+ VD +N L ++ +T K P +S+ + +RG+
Sbjct: 6 FLQKLSHESVTIELKNGTVIAGTIMGVDVSMNTHLKNVKMTLKGKNP--VSMDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP +DT L+ D +
Sbjct: 64 NIRYYILPDSLNLDTLLVDDTPK 86
>gi|21703324|gb|AAM76159.1|AF483079_1 U7 snRNP-specific SM-like protein [Boltenia villosa]
Length = 100
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 2 ERLLFYSFFKSLV----GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHM 57
ER Y+ L+ GK + VE+KND +I GTL VD ++N+ + ++ +
Sbjct: 7 ERFFKYNTLAILLCGMEGKLITVEMKNDTTITGTLXCVDGFMNMFMKKAKISSCNGTS-- 64
Query: 58 LSVKNCFIRGSVVRYVQLPGD 78
+S + ++ S RY+ LP D
Sbjct: 65 MSAERIHVKASNTRYIMLPND 85
>gi|392562210|gb|EIW55391.1| Sm-like ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 122
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V VELKN I GT+ VD +N L + +T ++ P S+ + IRG+
Sbjct: 6 FLMKLNNETVTVELKNGSVIHGTITGVDMQMNTHLKTVKMTARNREP--TSLDSLSIRGN 63
Query: 69 VVRYVQLP-GDEVDTQLLQDATRKEA 93
+RY LP +DT L+ DA + ++
Sbjct: 64 NIRYFVLPDALPLDTLLVDDAPKPKS 89
>gi|361128927|gb|EHL00852.1| putative Small nuclear ribonucleoprotein Sm D1 [Glarea lozoyensis
74030]
Length = 132
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN I GT+ SV +N L + +T + P L N +RGS
Sbjct: 6 FLMKCANETVTIELKNGTIIHGTITSVSPQMNTALRTVKMTQRGRDPIALDTIN--LRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEAVN 95
+RY LP +DT L+ DA RKEA +
Sbjct: 64 TIRYYILPDSLPLDTLLIDDAPKPKNKARKEAAD 97
>gi|213624559|gb|AAI71268.1| hypothetical protein LOC548997 [Xenopus (Silurana) tropicalis]
Length = 121
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G VEL+++ S GT+ +VD ++NI+L VT D+ + + F+ G
Sbjct: 20 LLQGLHGHVTTVELRDESSATGTITNVDAFMNIRLA--KVTYRDRRERETELDDLFVTGR 77
Query: 69 VVRYVQLPGDEVD 81
+RYV +P +EVD
Sbjct: 78 NIRYVHIP-EEVD 89
>gi|66357964|ref|XP_626160.1| small nuclear ribonucleoprotein D1. SM domain containing protein
[Cryptosporidium parvum Iowa II]
gi|46227255|gb|EAK88205.1| small nuclear ribonucleoprotein D1. SM domain containing protein
[Cryptosporidium parvum Iowa II]
Length = 137
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 2 ERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
++ F LV VV+ELKN I GT+ +VD +N L ++ ++ + P +S+
Sbjct: 10 RKMKLIRFLMKLVNNSVVIELKNGTIIQGTIVTVDMSMNTYLKNVKMSVKHRNP--VSLS 67
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
+RG+ +RY LP LL D T K+
Sbjct: 68 QITVRGNTIRYFILPDSLPLDALLIDDTPKQ 98
>gi|340381476|ref|XP_003389247.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D1-like
[Amphimedon queenslandica]
Length = 119
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T + P L++ +RG+
Sbjct: 6 FLMKLNHETVTIELKNGTVVHGTVAGVDMSMNTHLKSVKLTLKGREP--LALDTLSLRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP +DT L+ D TR++
Sbjct: 64 NIRYYILPESVPLDTLLVDDTTRRKT 89
>gi|167377383|ref|XP_001734381.1| small nuclear ribonucleoprotein sm D1 [Entamoeba dispar SAW760]
gi|165904137|gb|EDR29468.1| small nuclear ribonucleoprotein sm D1, putative [Entamoeba dispar
SAW760]
Length = 107
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELK+ V + GT+ VD Y+N+ L + +T K P + + +RG+
Sbjct: 6 FLMRLTNEVVTIELKSGVILTGTIVGVDNYMNVHLKVVKMTQKGKNP--IDLDQSTVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+R + LP +DT L+ D R
Sbjct: 64 TIRNIILPESLNLDTYLVDDTPR 86
>gi|145345472|ref|XP_001417233.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577460|gb|ABO95526.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 114
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + L + V +ELKN + GT+ VD +N L + +T K P +V++ +RG+
Sbjct: 6 FLQKLSNESVTIELKNGTTAHGTIMGVDVSMNTHLKQVKLTLKGKNP--TAVEHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEAVNA 96
+RY LP +DT L+ D ++ A
Sbjct: 64 TIRYYILPDSLNLDTLLVDDTPKQGKPRA 92
>gi|410081485|ref|XP_003958322.1| hypothetical protein KAFR_0G01530 [Kazachstania africana CBS
2517]
gi|372464910|emb|CCF59187.1| hypothetical protein KAFR_0G01530 [Kazachstania africana CBS
2517]
Length = 148
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPD 52
+F K L + V VELKN +I GTL +V +N+ LTD+++T P+
Sbjct: 3 LVNFLKKLRNEQVTVELKNGTTIWGTLQTVSPQMNVTLTDVALTLPN 49
>gi|428164901|gb|EKX33911.1| hypothetical protein GUITHDRAFT_98209 [Guillardia theta CCMP2712]
Length = 125
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELKN + G L + D ++N+ L D+ T D DK+ + C+IRG+ ++Y+++
Sbjct: 1 MLVELKNGETYNGILVNCDIWMNLSLRDVVCTSRDGDKF---WKIPECYIRGNNIKYLRV 57
Query: 76 PGDEVDTQLLQDATRKE 92
P DEV +++ + +KE
Sbjct: 58 P-DEVIDKVVDEPVKKE 73
>gi|409074771|gb|EKM75161.1| hypothetical protein AGABI1DRAFT_80275 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 122
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V VELKN + GT+ VD +N L + +T ++ P L + IRG+
Sbjct: 6 FLMKLNNETVTVELKNGSLVHGTITGVDMQMNTHLKTVKMTTRNREPQTLD--SLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP +DT L+ DA + +
Sbjct: 64 NIRYFTLPDALPLDTLLVDDAPKPKG 89
>gi|348571487|ref|XP_003471527.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like [Cavia
porcellus]
Length = 123
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L ++ T D+ H + + + FI G
Sbjct: 20 LLQGLQGQVTTVDLRDESVAHGRIDNVDAFMNIRLAKVTYT--DRRGHQVELDDLFITGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|149028026|gb|EDL83477.1| rCG38360, isoform CRA_c [Rattus norvegicus]
Length = 79
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/22 (95%), Positives = 22/22 (100%)
Query: 5 LFYSFFKSLVGKDVVVELKNDV 26
LFYSFFKSLVGKDVVVELKND+
Sbjct: 38 LFYSFFKSLVGKDVVVELKNDL 59
>gi|149028027|gb|EDL83478.1| rCG38360, isoform CRA_d [Rattus norvegicus]
Length = 85
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/22 (95%), Positives = 22/22 (100%)
Query: 5 LFYSFFKSLVGKDVVVELKNDV 26
LFYSFFKSLVGKDVVVELKND+
Sbjct: 38 LFYSFFKSLVGKDVVVELKNDL 59
>gi|367042806|ref|XP_003651783.1| hypothetical protein THITE_2112439 [Thielavia terrestris NRRL
8126]
gi|346999045|gb|AEO65447.1| hypothetical protein THITE_2112439 [Thielavia terrestris NRRL
8126]
Length = 121
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L ++ +T K +S++ +RGS
Sbjct: 6 FLMKCANETVTIELKNGTVVHGTIASVSPQMNTALRNVKMT--PKGQDAISLETLNVRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ DA RKEA
Sbjct: 64 TIRYFILPDSLPLDTLLIDDAPKPKNKARKEA 95
>gi|224003195|ref|XP_002291269.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973045|gb|EED91376.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 120
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
F + L + V +ELKN I GT+ VD +N L +T K P +S +
Sbjct: 3 LVKFLQKLNREQVTIELKNGTVISGTVVGVDATMNAHLKKAKLTAKGKNP--VSYATLSV 60
Query: 66 RGSVVRYVQLP-GDEVDTQLLQDATR 90
RGS VR LP G +D L++DA +
Sbjct: 61 RGSTVRSWILPDGLNLDALLVEDAPK 86
>gi|402087104|gb|EJT82002.1| small nuclear ribonucleoprotein Sm D1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 123
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L ++ +T + P L N IRGS
Sbjct: 6 FLMKCTNETVTIELKNGTIVHGTIASVSPQMNTALRNVKMTPRGQDPIPLDAMN--IRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ DA + +
Sbjct: 64 TIRYFILPDSLPLDTLLVDDAPKPK 88
>gi|395830185|ref|XP_003788215.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10 isoform 1
[Otolemur garnettii]
gi|395830187|ref|XP_003788216.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10 isoform 2
[Otolemur garnettii]
Length = 123
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ G + +VD ++NI+L +++ T D+ H + + + F+ G
Sbjct: 20 LLQGLQGQVTTVDLRDESVARGRIDNVDAFMNIRLANVTYT--DRRGHQVELDDLFVTGR 77
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 78 NVRYVHIPDD 87
>gi|452986281|gb|EME86037.1| hypothetical protein MYCFIDRAFT_130274, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 126
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVKNCFIRGSVVRY 72
G ++VELK ++ G L S D Y+N+ L ++ T P DK+ + C++RG+ ++Y
Sbjct: 12 GHPMLVELKTGETLNGHLVSCDTYMNLTLKEVVQTSPEGDKF---FRLAECYVRGNNIKY 68
Query: 73 VQLPGDEVDT 82
+++P + VD
Sbjct: 69 LRVPDEVVDA 78
>gi|426195101|gb|EKV45031.1| hypothetical protein AGABI2DRAFT_73218, partial [Agaricus
bisporus var. bisporus H97]
Length = 118
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V VELKN + GT+ VD +N L + +T ++ P L + IRG+
Sbjct: 2 FLMKLNNETVTVELKNGSLVHGTITGVDMQMNTHLKTVKMTTRNREPQTLD--SLSIRGN 59
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP +DT L+ DA + +
Sbjct: 60 NIRYFTLPDALPLDTLLVDDAPKPKG 85
>gi|324507721|gb|ADY43268.1| U6 snRNA-associated Sm-like protein LSm4 [Ascaris suum]
Length = 130
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ ++VELKN + G L S D ++NI L D T D D++ L +
Sbjct: 2 VLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDAWMNIHLRDAICTSRDGDRF---LKMP 58
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
++RGS ++Y+++P D V+
Sbjct: 59 EVYVRGSTIKYLRIPDDVVE 78
>gi|170584340|ref|XP_001896959.1| Sm protein [Brugia malayi]
gi|158595648|gb|EDP34187.1| Sm protein [Brugia malayi]
Length = 116
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 11 KSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVV 70
+++ G VVVELKN ++ G L D +NI++ ++V D +Y L + +I+G +
Sbjct: 23 QAMEGSSVVVELKNYSTVHGILAGCDDAMNIEMKAVTVHDSKRYSAPLHCDSFYIQGKFI 82
Query: 71 RYVQL 75
R+V
Sbjct: 83 RFVHF 87
>gi|324523014|gb|ADY48174.1| U6 snRNA-associated Sm-like protein LSm4 [Ascaris suum]
Length = 166
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S ++ ++VELKN + G L S D ++NI L D T D D++ M V ++
Sbjct: 42 SLLRTAQNHPMLVELKNGETYNGHLVSCDAWMNIHLRDAICTSRDGDRFLKMPEV---YV 98
Query: 66 RGSVVRYVQLPGDEVD 81
RGS ++Y+++P D V+
Sbjct: 99 RGSTIKYLRIPDDVVE 114
>gi|325186130|emb|CCA20631.1| unnamed protein product putative [Albugo laibachii Nc14]
Length = 143
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELKN + G + D ++NI L D+ T D D++ M C+IRG+ V+YV++
Sbjct: 1 MLVELKNGDTYNGHFKNCDTWMNINLCDVICTSKDGDRFWKMPE---CYIRGNTVKYVRV 57
Query: 76 PGDEVDTQLLQDATRKE 92
P + + ++ RK+
Sbjct: 58 PNEILGLVQEENTNRKD 74
>gi|183234262|ref|XP_001913982.1| small nuclear ribonucleoprotein Sm D1 [Entamoeba histolytica
HM-1:IMSS]
gi|183237106|ref|XP_655345.2| small nuclear ribonucleoprotein Sm D1 [Entamoeba histolytica
HM-1:IMSS]
gi|169799375|gb|EAL49955.2| small nuclear ribonucleoprotein Sm D1, putative [Entamoeba
histolytica HM-1:IMSS]
gi|169801178|gb|EDS89240.1| small nuclear ribonucleoprotein Sm D1, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449702378|gb|EMD43029.1| LSM domain containing protein [Entamoeba histolytica KU27]
Length = 107
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELK+ + GT+ VD Y+N+ L + +T K P +++ +RG+
Sbjct: 6 FLMRLTNEVVTIELKSGAVLTGTIVGVDNYMNVHLKVVKMTQKGKNP--INLDQSTVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+R + LP +DT L+ D R
Sbjct: 64 TIRNIILPESLNLDTYLVDDTPR 86
>gi|320592072|gb|EFX04511.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 348
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
MER F + V +ELKN + GT+ SV +N L ++ +T + P L
Sbjct: 219 MER-----FLMKCANETVTIELKNGTIVHGTIASVSPQMNTALRNVKMTPKGQDPVPLDT 273
Query: 61 KNCFIRGSVVRYVQLPGD-EVDTQLLQDATR 90
N +RGS +RY LP +DT L+ DA +
Sbjct: 274 IN--LRGSTIRYFILPDSLPLDTLLVDDAPK 302
>gi|242764900|ref|XP_002340864.1| small nuclear ribonucleoprotein SmD1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218724060|gb|EED23477.1| small nuclear ribonucleoprotein SmD1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 124
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + + V +ELKN + GT+ SV +N L + +T + P +S+ IRGS
Sbjct: 6 FLMKCMNETVTIELKNGTILSGTIASVSPQMNTALRTVKMTPKGREP--ISLDTINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQD------ATRKEAVN 95
+RY LP +DT L+ D RKEA +
Sbjct: 64 TIRYYILPDSLPLDTLLVDDQPKPRNKARKEAAD 97
>gi|11138537|gb|AAG31433.1|AF204156_1 snRNP core protein SMX5c [Mus musculus]
gi|148694758|gb|EDL26705.1| LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_c [Mus musculus]
Length = 71
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/22 (95%), Positives = 22/22 (100%)
Query: 5 LFYSFFKSLVGKDVVVELKNDV 26
LFYSFFKSLVGKDVVVELKND+
Sbjct: 38 LFYSFFKSLVGKDVVVELKNDL 59
>gi|159476634|ref|XP_001696416.1| U6 snRNA-associated Sm-like protein LSm4 [Chlamydomonas
reinhardtii]
gi|158282641|gb|EDP08393.1| U6 snRNA-associated Sm-like protein LSm4 [Chlamydomonas
reinhardtii]
Length = 134
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S K+ V+VELKN + G L D ++N+ L+++ T D +
Sbjct: 1 MLPLSLLKTAQRHGVLVELKNGETYNGYLQHCDTWMNLHLSEVICTSKDGQ-RFFKMPEA 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
+IRG+ ++Y+ +P + VD ++ R E
Sbjct: 60 YIRGNTIKYISVPEEVVDKVQEENLRRDE 88
>gi|345564647|gb|EGX47607.1| hypothetical protein AOL_s00083g115 [Arthrobotrys oligospora ATCC
24927]
Length = 132
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V VELKN I GT+ +V +N L + +T ++ P L N IRGS
Sbjct: 6 FLMKCANETVTVELKNGTIIHGTITTVTPTMNTSLRTVRMTVRNREPQTLDTIN--IRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ D+ + +
Sbjct: 64 TIRYFILPDSLPLDTLLIDDSVKAK 88
>gi|452819748|gb|EME26801.1| U6 snRNA-associated Sm-like protein LSm4 isoform 1 [Galdieria
sulphuraria]
Length = 110
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G+ V+VELK+ + G L ++D ++N+ L ++ T + D++ +
Sbjct: 2 VLPLSLLKAAQGQPVLVELKSGDTYNGHLVNIDSWMNLNLREVVWTSREGDRF---WKIA 58
Query: 62 NCFIRGSVVRYVQLPGDEVDT 82
++RG+ V+Y+++P + VDT
Sbjct: 59 EIYVRGNTVKYLRVPEEIVDT 79
>gi|170578381|ref|XP_001894384.1| Probable U6 snRNA-associated Sm-like protein LSm4 [Brugia malayi]
gi|158599053|gb|EDP36777.1| Probable U6 snRNA-associated Sm-like protein LSm4, putative [Brugia
malayi]
Length = 163
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S ++ ++VELKN + G L + D ++NI L D T D D++ L ++ ++
Sbjct: 37 SLLRTAQNHPMLVELKNGETYNGHLVACDAWMNIHLRDAICTSRDGDRF---LKMQEVYV 93
Query: 66 RGSVVRYVQLPGDEVD 81
RGS ++Y+++P D V+
Sbjct: 94 RGSTIKYLRIPDDVVE 109
>gi|401422144|ref|XP_003875560.1| SmD-1 like small nuclear ribonucleoprotein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491798|emb|CBZ27071.1| SmD-1 like small nuclear ribonucleoprotein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 103
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
+F + L G V +ELKN + G + VD +N ++ +T K P + V+ +RG
Sbjct: 15 TFLQQLRGTLVEIELKNASIVSGEISYVDANMNTYMSHAKITSKGKNP--VEVEEYMVRG 72
Query: 68 SVVRYVQLPGDEVDTQLLQDATRKE 92
S +RY+ +P +L+ A+ K+
Sbjct: 73 STIRYIIMPESLNTYDILKQASTKK 97
>gi|452819749|gb|EME26802.1| U6 snRNA-associated Sm-like protein LSm4 isoform 2 [Galdieria
sulphuraria]
Length = 127
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ G+ V+VELK+ + G L ++D ++N+ L ++ T + D++ +
Sbjct: 2 VLPLSLLKAAQGQPVLVELKSGDTYNGHLVNIDSWMNLNLREVVWTSREGDRF---WKIA 58
Query: 62 NCFIRGSVVRYVQLPGDEVDT 82
++RG+ V+Y+++P + VDT
Sbjct: 59 EIYVRGNTVKYLRVPEEIVDT 79
>gi|146086705|ref|XP_001465619.1| SmD-1 like small nuclear ribonucleoprotein [Leishmania infantum
JPCM5]
gi|157869411|ref|XP_001683257.1| putative small nuclear ribonucleoprotein [Leishmania major strain
Friedlin]
gi|398015293|ref|XP_003860836.1| small nuclear ribonucleoprotein, putative [Leishmania donovani]
gi|68224141|emb|CAJ04478.1| putative small nuclear ribonucleoprotein [Leishmania major strain
Friedlin]
gi|134069718|emb|CAM68043.1| SmD-1 like small nuclear ribonucleoprotein [Leishmania infantum
JPCM5]
gi|322499059|emb|CBZ34131.1| small nuclear ribonucleoprotein, putative [Leishmania donovani]
Length = 103
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
+F + L G V +ELKN + G + VD +N ++ +T K P + V+ +RG
Sbjct: 15 TFLQQLRGTLVEIELKNASIVSGEIAYVDANMNTYMSHAKITSKGKNP--VEVEEYMVRG 72
Query: 68 SVVRYVQLPGDEVDTQLLQDATRKE 92
S +RY+ +P +L+ A+ K+
Sbjct: 73 STIRYIIMPESLNTYDILKQASTKK 97
>gi|402581860|gb|EJW75807.1| small nuclear ribonucleoprotein, partial [Wuchereria bancrofti]
Length = 123
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
S ++ ++VELKN + G L + D ++NI L D T D D++ L ++ ++
Sbjct: 4 SLLRTAQNHPMLVELKNGETYNGHLVACDAWMNIHLRDAICTSRDGDRF---LKMQEVYV 60
Query: 66 RGSVVRYVQLPGDEVD 81
RGS ++Y+++P D V+
Sbjct: 61 RGSTIKYLRIPDDVVE 76
>gi|328770984|gb|EGF81025.1| hypothetical protein BATDEDRAFT_11263 [Batrachochytrium
dendrobatidis JAM81]
Length = 124
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 7 YSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIR 66
+ F + V +ELKN +I GT+ VD +N L + +T +K P + ++ IR
Sbjct: 7 FRFLMKCWNETVTIELKNGTTINGTITGVDMQMNTHLKTVKMTVKNKDP--VHLETLSIR 64
Query: 67 GSVVRYVQLP-GDEVDTQLLQDATRKEA 93
G+ +RY LP +DT L+ D + +A
Sbjct: 65 GNTIRYFILPDALPLDTLLIDDRPKLKA 92
>gi|407040985|gb|EKE40459.1| LSM domain containing protein [Entamoeba nuttalli P19]
Length = 107
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELK+ + GT+ VD Y+N+ L + +T K P +++ +RG+
Sbjct: 6 FLMRLTNEVVTIELKSGAILTGTIVGVDNYMNVHLKVVKMTQKGKNP--INLDQSTVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+R + LP +DT L+ D R
Sbjct: 64 TIRNIILPESLNLDTYLVDDTPR 86
>gi|388854781|emb|CCF51674.1| related to small nuclear ribonucleoprotein sm d3 [Ustilago
hordei]
Length = 134
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 14 VGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPD-KYPHMLSVKNCFIRGSVVRY 72
VG + VELK GTL+ + N+ + D++ T PD K H+ +N +IRG+++R+
Sbjct: 15 VGHVITVELKGGACYRGTLYDAEDSFNVAMKDVTATAPDGKQSHL---ENIYIRGNMLRF 71
Query: 73 VQLP 76
+ +P
Sbjct: 72 IIVP 75
>gi|344230315|gb|EGV62200.1| Sm-like ribonucleo protein [Candida tenuis ATCC 10573]
Length = 140
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
S + ++VELKN ++ G L + D ++N+ L+++ T P+ + +IRGS
Sbjct: 6 LLNSAKSQPILVELKNGETLNGLLTNCDSWMNLTLSEVIQTSPNAEV-FTKIPEIYIRGS 64
Query: 69 VVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
++Y++LP +D Q+ E N +
Sbjct: 65 HIKYLRLPEQTMDYAKEQNMINMEQRNKNQ 94
>gi|242216937|ref|XP_002474272.1| predicted protein [Postia placenta Mad-698-R]
gi|220726564|gb|EED80509.1| predicted protein [Postia placenta Mad-698-R]
Length = 121
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P ++ + IRG+
Sbjct: 6 FLMKLNNETVTIELKNGSVVHGTITGVDMQMNTHLKTVKLTARNREP--MAHETLTIRGN 63
Query: 69 VVRYVQLP-GDEVDTQLLQDATR 90
+RY LP +DT L+ DA +
Sbjct: 64 TIRYFVLPDAIPLDTLLVDDAPK 86
>gi|212528972|ref|XP_002144643.1| small nuclear ribonucleoprotein SmD1, putative [Talaromyces
marneffei ATCC 18224]
gi|210074041|gb|EEA28128.1| small nuclear ribonucleoprotein SmD1, putative [Talaromyces
marneffei ATCC 18224]
Length = 126
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P +S+ IRGS
Sbjct: 6 FLMKCTNETVTIELKNGTILSGTIASVSPQMNTALRTVKMTPKGREP--ISLDTINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQD------ATRKEAVN 95
+RY LP +DT L+ D RKEA +
Sbjct: 64 TIRYYILPDSLPLDTLLVDDQPKPRNKARKEAAD 97
>gi|260943870|ref|XP_002616233.1| hypothetical protein CLUG_03474 [Clavispora lusitaniae ATCC
42720]
gi|238849882|gb|EEQ39346.1| hypothetical protein CLUG_03474 [Clavispora lusitaniae ATCC
42720]
Length = 115
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
M+ + F S + V VELKN S+ G + S +N+ + +I + P + P ++
Sbjct: 1 MKLVRFLMTLPSATNQPVTVELKNGNSVNGQILSCSPSMNLSMKNIKLIQPHQDPQLMQF 60
Query: 61 KNCFIRGSVVRYVQLPGDEVDTQLLQDATRK 91
N IRG+ +R + LP D LL +T K
Sbjct: 61 MN--IRGNQIRQILLPDDLNIESLLSRSTVK 89
>gi|221055864|ref|XP_002259070.1| U6 snRNA associated Sm-like protein Ls [Plasmodium knowlesi
strain H]
gi|193809141|emb|CAQ39843.1| U6 snRNA associated Sm-like protein Ls,putative [Plasmodium
knowlesi strain H]
Length = 126
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
V+VELKN + G L D+++N+ + +I T D DK+ + C++RG+ V+Y+++
Sbjct: 16 VMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKF---WKISECYVRGNSVKYIRV 72
Query: 76 PGDEVDTQLLQDATRKEAVN 95
+ +D Q +++ ++A N
Sbjct: 73 QDEAID-QAIEETNEQKARN 91
>gi|378731678|gb|EHY58137.1| small nuclear ribonucleoprotein D1 [Exophiala dermatitidis
NIH/UT8656]
Length = 130
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLN-----IKLTDISVTDPDKYPHMLS 59
+ Y F + V +ELKN + GT+ SV +N +K+T + + P +S
Sbjct: 1 MSYRFLMKCANETVTIELKNGTIVHGTITSVSPQMNTALRAVKMTTKNRSSPSAPGETIS 60
Query: 60 VKNCFIRGSVVRYVQLPGD-EVDTQLLQDATRKE 92
+ IRGS +RY LP +DT L+ D + +
Sbjct: 61 LDTINIRGSTIRYFILPDSLPLDTLLIDDQPKPK 94
>gi|363808094|ref|NP_001242473.1| uncharacterized protein LOC100786834 [Glycine max]
gi|255645080|gb|ACU23039.1| unknown [Glycine max]
Length = 138
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELKN + G L + D ++NI L ++ T D D++ M C+IRG+ ++Y+++
Sbjct: 1 MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM---PECYIRGNTIKYLRV 57
Query: 76 PGDEVDTQLLQDATRKEA 93
P + +D +Q+ T+ A
Sbjct: 58 PDEVIDK--VQEETKSRA 73
>gi|156377251|ref|XP_001630770.1| predicted protein [Nematostella vectensis]
gi|156217797|gb|EDO38707.1| predicted protein [Nematostella vectensis]
Length = 114
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 11/79 (13%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDI----SVTDPDKYPHMLSVKNCF 64
K++ G + VEL+N+ + G + VD ++NIK+ D+ + + D P M F
Sbjct: 16 LIKAVQGYNTTVELRNESYLEGFIEHVDGFMNIKMKDVKFVKASGEVDNLPAM------F 69
Query: 65 IRGSVVRYVQLPGDEVDTQ 83
+ G+ +RYV +P DE+D +
Sbjct: 70 VVGTQIRYVHIP-DEIDMR 87
>gi|365981439|ref|XP_003667553.1| hypothetical protein NDAI_0A01520 [Naumovozyma dairenensis CBS
421]
gi|343766319|emb|CCD22310.1| hypothetical protein NDAI_0A01520 [Naumovozyma dairenensis CBS
421]
Length = 201
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISV---TDPDKYPHMLSVKNC--FIRGSV 69
G+ + VELKN I G L +VD ++N+ L+++S +D P +K+ ++RG+
Sbjct: 12 GQQMRVELKNGEVIEGKLTNVDNWMNLTLSNVSEYKGSDAFASPQTEVMKSTEIYVRGTF 71
Query: 70 VRYVQLPGDEVD 81
++Y+ LP D +D
Sbjct: 72 IKYINLPDDIID 83
>gi|195995525|ref|XP_002107631.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588407|gb|EDV28429.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 96
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S K+ ++VELKN + G L + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVNCDNFMNINLREVICTSKDGDRFWKM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEV 80
C++RG++++Y+++P DEV
Sbjct: 58 ECYLRGNMIKYLRIP-DEV 75
>gi|260944226|ref|XP_002616411.1| hypothetical protein CLUG_03652 [Clavispora lusitaniae ATCC
42720]
gi|238850060|gb|EEQ39524.1| hypothetical protein CLUG_03652 [Clavispora lusitaniae ATCC
42720]
Length = 71
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
S+ ++++VELKN ++ G L + D ++N+ L+++ V + +K ++ +IRGS
Sbjct: 1 MLTSIKNEEILVELKNGETVIGKLSNCDSWMNLTLSNV-VHNYNKGEKFNKIEEIYIRGS 59
Query: 69 VVRYVQLP 76
++Y++LP
Sbjct: 60 HIKYLRLP 67
>gi|302411190|ref|XP_003003428.1| small nuclear ribonucleoprotein Sm D1 [Verticillium albo-atrum
VaMs.102]
gi|261357333|gb|EEY19761.1| small nuclear ribonucleoprotein Sm D1 [Verticillium albo-atrum
VaMs.102]
Length = 121
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P L N IRGS
Sbjct: 6 FLMKCANETVTIELKNGTIVNGTISSVSPQMNTALRIVKMTTKGQDPVALDTMN--IRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ DA + +
Sbjct: 64 TIRYFILPDSLPLDTLLVDDAPKPK 88
>gi|393222663|gb|EJD08147.1| Sm-like ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 130
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + + + ++VELKN + G L + D ++NI L ++ T D + C
Sbjct: 1 MLPLTLLNAAQNRPMLVELKNGETFNGHLVNCDNFMNITLREVYQTSADA-DRFWKLTEC 59
Query: 64 FIRGSVVRYVQLPGDEVD 81
+IRGS ++Y+++P +D
Sbjct: 60 YIRGSTIKYLRVPDKLLD 77
>gi|346978140|gb|EGY21592.1| small nuclear ribonucleoprotein Sm D1 [Verticillium dahliae
VdLs.17]
Length = 121
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P L N IRGS
Sbjct: 6 FLMKCANETVTIELKNGTIVNGTISSVSPQMNTALRIVKMTTKGQDPIALDTMN--IRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ DA + +
Sbjct: 64 TIRYFILPDSLPLDTLLVDDAPKPK 88
>gi|156030963|ref|XP_001584807.1| hypothetical protein SS1G_14262 [Sclerotinia sclerotiorum 1980]
gi|154700653|gb|EDO00392.1| hypothetical protein SS1G_14262 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 136
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN I GT+ SV +N L + +T K LS+ +RGS
Sbjct: 6 FLMKCANETVTIELKNGTIIHGTITSVSPQMNTALRTVKMT--PKNGASLSLDTINLRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEAV 94
+RY LP +DT L+ DA RKEA
Sbjct: 64 TIRYYILPDSLPLDTLLIDDAPKPKNKARKEAT 96
>gi|134109199|ref|XP_776714.1| hypothetical protein CNBC2050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259394|gb|EAL22067.1| hypothetical protein CNBC2050 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 147
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + GK ++VELKN V+ G L D ++N+ L ++ T D +K
Sbjct: 1 MLPLSLLTAAQGKPMLVELKNGVTFNGHLVECDTFMNVTLREVYQTSADG-ERFWKMKEM 59
Query: 64 FIRGSVVRYVQL 75
FI+G++++Y ++
Sbjct: 60 FIKGNIIKYFRI 71
>gi|396483691|ref|XP_003841766.1| hypothetical protein LEMA_P096960.1 [Leptosphaeria maculans JN3]
gi|312218341|emb|CBX98287.1| hypothetical protein LEMA_P096960.1 [Leptosphaeria maculans JN3]
Length = 222
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V VELKN + GT+ SV +N+ L + T + +++ + +RGS
Sbjct: 97 FLMKCQNETVTVELKNGTIVNGTITSVSPLMNVALRAVKYTPKSR--DTVALDSMTVRGS 154
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RYV LP +DT L+ DA RKEA
Sbjct: 155 TIRYVILPDSLPLDTLLIDDAPKPKNKARKEA 186
>gi|363755190|ref|XP_003647810.1| hypothetical protein Ecym_7144 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891846|gb|AET40993.1| hypothetical protein Ecym_7144 [Eremothecium cymbalariae
DBVPG#7215]
Length = 189
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G+ ++VELKN +I G L +VD ++N+ L ++ ++ +L + ++RGSV++Y++
Sbjct: 12 GQRMLVELKNGETIEGELTNVDNWMNVTLGNVVHKGGEQ---VLELPEIYVRGSVIKYIK 68
Query: 75 LPGDEVD 81
L D +D
Sbjct: 69 LQDDIID 75
>gi|422295210|gb|EKU22509.1| small nuclear ribonucleoprotein D1, partial [Nannochloropsis
gaditana CCMP526]
Length = 108
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN +I GT+ VD +N L ++ VT K P +S ++ IRG+
Sbjct: 6 FLMKLNNETVTIELKNGTTIQGTISGVDVSMNTYLKNVKVTLKGKNP--VSYESLSIRGN 63
Query: 69 VVRYVQLP-GDEVDTQLLQDATRKE 92
+RY LP +D L+ D + +
Sbjct: 64 NIRYYILPDALNLDALLVDDGPKNK 88
>gi|168068658|ref|XP_001786159.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662031|gb|EDQ49029.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 111
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +S+ + IRG+
Sbjct: 2 FLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKSVKLTLKGKVP--VSLDHLSIRGN 59
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP +DT L+ D R +A
Sbjct: 60 NIRYYILPDSLNLDTLLVDDTPRVKA 85
>gi|412985751|emb|CCO16951.1| predicted protein [Bathycoccus prasinos]
Length = 158
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + L + V +ELKN + GT+ VD +N L + +T + P L + IRG+
Sbjct: 42 FLQKLNNETVTIELKNGTTCSGTILGVDISMNTHLKSVKLTVKGRNPQTLD--HLSIRGN 99
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEAVN 95
+RY LP +D L++D +++N
Sbjct: 100 TIRYYILPESLNLDALLVEDMPTNKSLN 127
>gi|399949948|gb|AFP65604.1| small nuclear ribonucleoprotein D1 [Chroomonas mesostigmatica
CCMP1168]
Length = 90
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 10 FKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSV 69
F+ ++ ++V +ELKN V I G + +D+++NI + T ++ + + + + FIRG+
Sbjct: 7 FQKILEENVTIELKNGVYISGLIVDIDKHMNIYFKNAKRTLNER--NTIFIDHMFIRGNK 64
Query: 70 VRYVQLPG 77
+RY+ LP
Sbjct: 65 IRYIILPN 72
>gi|125540070|gb|EAY86465.1| hypothetical protein OsI_07847 [Oryza sativa Indica Group]
Length = 114
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN ++ GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEAVNAT 97
+RY LP ++T L++D R +A T
Sbjct: 64 NIRYYILPDSLNLETLLVEDTPRVKAKKPT 93
>gi|47028321|gb|AAT09093.1| U6 snRNA-associated Sm like protein [Bigelowiella natans]
Length = 119
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S ++ VG ++VEL+N + G L S D ++N+ + + T D + C
Sbjct: 1 MLPLSLLRTAVGHPMLVELRNGETYNGHLVSCDNWMNLLIRGVICTSRDG-ERFWQMDEC 59
Query: 64 FIRGSVVRYVQLPGDEV 80
+I+G+ ++Y+++P DEV
Sbjct: 60 YIKGNTIKYLRIP-DEV 75
>gi|444706872|gb|ELW48189.1| U7 snRNA-associated Sm-like protein LSm10 [Tupaia chinensis]
Length = 156
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G V+L+++ G + +VD ++NI+L ++ TD ++ H + + + F+ G
Sbjct: 53 LLQGLQGLVTTVDLRDESVARGRIDNVDAFMNIRLAQVTYTD--RWGHQVKLDDLFVTGR 110
Query: 69 VVRYVQLPGD 78
VRYV +P D
Sbjct: 111 NVRYVHIPDD 120
>gi|50543206|ref|XP_499769.1| YALI0A04961p [Yarrowia lipolytica]
gi|49645634|emb|CAG83694.1| YALI0A04961p [Yarrowia lipolytica CLIB122]
Length = 138
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ SV +N L ++ +T ++ P L N IRG+
Sbjct: 6 FLMKLTSESVQIELKNGTVLLGTVMSVSNNMNTTLKNVKMTMKNRPPTSLDYIN--IRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+R+ LP +DT L+ D + +
Sbjct: 64 TIRFFILPDSLPLDTLLIDDTPKAK 88
>gi|443711594|gb|ELU05300.1| hypothetical protein CAPTEDRAFT_181174 [Capitella teleta]
Length = 144
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
+ VG+ +EL+ND SI GT+ VD +N+ L+ I+ T K + ++
Sbjct: 16 LLCLLQGCVGRCTTIELRNDDSILGTIDHVDIQMNVFLSTITFTRA-KTGQQSQLDKLYV 74
Query: 66 RGSVVRYVQLPGD 78
+G +RYV +P D
Sbjct: 75 QGKNIRYVHIPDD 87
>gi|406867718|gb|EKD20756.1| small nuclear ribonucleoprotein Sm D1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 128
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN I GT+ SV +N L + +T + P +S+ +RGS
Sbjct: 6 FLMKCANETVTIELKNGTIIHGTITSVSPQMNTALRTVKMTQRGRDP--ISLDTINLRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ DA + +
Sbjct: 64 TIRYYILPDSLPLDTLLIDDAPKPK 88
>gi|389747560|gb|EIM88738.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 123
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P S+ + IRG+
Sbjct: 6 FLMKLNNETVTIELKNGSIVHGTITGVDMQMNTHLKTVKMTARNRDPS--SLDSLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP +DT L+ DA + ++
Sbjct: 64 NIRYFVLPDSLPLDTLLVDDAPKPKS 89
>gi|345560998|gb|EGX44114.1| hypothetical protein AOL_s00210g95 [Arthrobotrys oligospora ATCC
24927]
Length = 145
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYP-HMLSVKN 62
+L + ++ G ++VELKN ++ G L S D ++N+ L ++ T PD H L
Sbjct: 1 MLPLTLLTTVQGHPLLVELKNGETLNGHLVSCDTWMNLTLKEVIQTSPDGETFHRLP--E 58
Query: 63 CFIRGSVVRYVQLPGDEVD 81
++RG+ ++Y+++P + +D
Sbjct: 59 AYVRGNNIKYLRVPDEIID 77
>gi|327287168|ref|XP_003228301.1| PREDICTED: u7 snRNA-associated Sm-like protein LSm10-like [Anolis
carolinensis]
Length = 123
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ VEL+++ G + +VD ++NI+L + TD L ++ F+ G
Sbjct: 20 LLQGLTGRVTQVELRDESLAVGRVTNVDAFMNIRLGPTTFTDRTGRTSQL--EDLFVAGR 77
Query: 69 VVRYVQLPGDEVD 81
VRYV +P DEVD
Sbjct: 78 SVRYVHIP-DEVD 89
>gi|302923356|ref|XP_003053658.1| hypothetical protein NECHADRAFT_75034 [Nectria haematococca mpVI
77-13-4]
gi|256734599|gb|EEU47945.1| hypothetical protein NECHADRAFT_75034 [Nectria haematococca mpVI
77-13-4]
Length = 114
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPG 77
V +ELKN + GT+ SV +N L ++ +T + P L N IRGS +RY LP
Sbjct: 8 VTIELKNGTIVHGTISSVSPQMNTALRNVKMTIKGQDPVSLDTMN--IRGSTIRYFILPD 65
Query: 78 D-EVDTQLLQDA------TRKEA 93
+DT L+ DA RKEA
Sbjct: 66 SLPLDTLLIDDAPKPKNKARKEA 88
>gi|448080879|ref|XP_004194749.1| Piso0_005263 [Millerozyma farinosa CBS 7064]
gi|359376171|emb|CCE86753.1| Piso0_005263 [Millerozyma farinosa CBS 7064]
Length = 130
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
S + ++VELKN ++ G L + D ++N+ L ++ V + + L + C++RG+
Sbjct: 6 LLTSAKNQPILVELKNGETLNGELVNCDSWMNLTLNNV-VQVSENGTNFLKLPECYVRGN 64
Query: 69 VVRYVQLPGDEVD 81
++Y++LP + +D
Sbjct: 65 HIKYMRLPEELMD 77
>gi|169606003|ref|XP_001796422.1| hypothetical protein SNOG_06034 [Phaeosphaeria nodorum SN15]
gi|111065978|gb|EAT87098.1| hypothetical protein SNOG_06034 [Phaeosphaeria nodorum SN15]
Length = 187
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 7 YSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCF 64
Y + G ++VELK+ ++ G L + D ++N+ L ++ T D DK+ + + +
Sbjct: 64 YGLLTAATGHPMLVELKSGETLNGLLVNCDTWMNLTLREVVQTSADGDKF---MRLPEIY 120
Query: 65 IRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
+RGS ++Y+++P + VD +++D K+ N
Sbjct: 121 VRGSTIKYLRVPDEIVD--VVKDQQVKDQAN 149
>gi|82913333|ref|XP_728601.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485036|gb|EAA20166.1| Sm protein, putative [Plasmodium yoelii yoelii]
Length = 130
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
V+VELKN + G L D+++N+ + +I T D DK+ + C++RGS V+Y+++
Sbjct: 14 VMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKF---WKISECYVRGSSVKYIRV 70
Query: 76 PGDEVDTQLLQDATRK 91
++ + + A +K
Sbjct: 71 QDQAIENAIEETAEQK 86
>gi|254574234|ref|XP_002494226.1| hypothetical protein [Komagataella pastoris GS115]
gi|238034025|emb|CAY72047.1| Hypothetical protein PAS_chr4_0781 [Komagataella pastoris GS115]
gi|328353953|emb|CCA40350.1| Probable small nuclear ribonucleoprotein Sm D1 [Komagataella
pastoris CBS 7435]
Length = 115
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
F L+ + V VELKN + GT+ SV +NI L ++ +T ++ P L N I
Sbjct: 3 LVRFLMKLISEQVQVELKNGTIVSGTIISVTPSMNINLKNVKMTVRNRNPVSLEFIN--I 60
Query: 66 RGSVVRYVQLPGDEVDTQLLQDA 88
RG+ VR V LP + LL D+
Sbjct: 61 RGNNVRIVILPDNLNLDSLLTDS 83
>gi|440640424|gb|ELR10343.1| hypothetical protein GMDG_04725 [Geomyces destructans 20631-21]
Length = 139
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN I GT+ SV +N L + +T + P L N +RGS
Sbjct: 6 FLMKCANETVTIELKNGTIIHGTITSVSPQMNTALRTVKMTARGRDPVALDTIN--LRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ DA + +
Sbjct: 64 TIRYYILPDSLPLDTLLIDDAPKPK 88
>gi|321252513|ref|XP_003192431.1| pre-mRNA splicing factor [Cryptococcus gattii WM276]
gi|317458899|gb|ADV20644.1| pre-mRNA splicing factor, putative [Cryptococcus gattii WM276]
Length = 121
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 13 LVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT---DPDKYPHMLSVKNCFIRGSV 69
L + V +ELKN I GT+ SVD +N L + +T P P LS+ + IRG+
Sbjct: 3 LNNETVTIELKNGTVIHGTITSVDPQMNTHLKSVKLTLRSQPSSQPP-LSLDSIAIRGNN 61
Query: 70 VRYVQLPGD-EVDTQLLQDA 88
+RY LP +DT L+ DA
Sbjct: 62 IRYFILPDSLPLDTLLVDDA 81
>gi|58262702|ref|XP_568761.1| pre-mRNA splicing factor [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108736|ref|XP_777021.1| hypothetical protein CNBB5470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259704|gb|EAL22374.1| hypothetical protein CNBB5470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223411|gb|AAW41454.1| pre-mRNA splicing factor, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 121
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 13 LVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT---DPDKYPHMLSVKNCFIRGSV 69
L + V +ELKN I GT+ SVD +N L + +T P P LS+ + IRG+
Sbjct: 3 LNNETVTIELKNGTVIHGTITSVDPQMNTHLKSVKLTLRSQPSSQPP-LSLDSIAIRGNN 61
Query: 70 VRYVQLPGD-EVDTQLLQDA 88
+RY LP +DT L+ DA
Sbjct: 62 IRYFILPDSLPLDTLLVDDA 81
>gi|50413178|ref|XP_457218.1| DEHA2B05918p [Debaryomyces hansenii CBS767]
gi|49652883|emb|CAG85213.1| DEHA2B05918p [Debaryomyces hansenii CBS767]
Length = 165
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
S + ++VELKN S+ G L + D ++N+ L D+ + + + C+IRG+
Sbjct: 6 LLTSAKNQPILVELKNGESLNGQLVNCDSWMNLTLKDV-IQSSSNGETFVKLPECYIRGN 64
Query: 69 VVRYVQLPGDEVD 81
++Y++LP + +D
Sbjct: 65 HIKYLRLPEEIMD 77
>gi|328862810|gb|EGG11910.1| hypothetical protein MELLADRAFT_32687 [Melampsora larici-populina
98AG31]
Length = 113
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPG 77
V VELKN I GT+ VD +N L + +T ++ P L + IRGS +RY LP
Sbjct: 12 VTVELKNGTVIHGTISGVDVAMNTHLKAVKMTVRNREPQQLD--SLSIRGSNIRYFILPD 69
Query: 78 D-EVDTQLLQDATRKE 92
+DT L+ DA + +
Sbjct: 70 SLPLDTLLIDDAPKPK 85
>gi|68064470|ref|XP_674219.1| U6 snRNA associated Sm-like protein Ls; U6 snRNA associated
Sm-like protein LsM4 [Plasmodium berghei strain ANKA]
gi|56492635|emb|CAH99966.1| U6 snRNA associated Sm-like protein Ls; U6 snRNA associated
Sm-like protein LsM4, putative [Plasmodium berghei]
Length = 130
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
V+VELKN + G L D+++N+ + +I T D DK+ + C++RGS V+Y+++
Sbjct: 14 VMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKF---WKISECYVRGSSVKYIRV 70
Query: 76 PGDEVDTQLLQDATRK 91
++ + + A +K
Sbjct: 71 QDQAIENAIEETAEQK 86
>gi|341038646|gb|EGS23638.1| putative small nuclear ribonucleoprotein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 118
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV ++ L ++ T + P+ SV++ +RG+
Sbjct: 6 FLMKCANETVTIELKNGAIVHGTIASVTPKMDTALRNVRYTPKGEEPY--SVESLTVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ DA RKEA
Sbjct: 64 TIRYYILPDSLPLDTLLIDDAPKPKNKARKEA 95
>gi|383853564|ref|XP_003702292.1| PREDICTED: 5'-nucleotidase domain-containing protein 1-like
[Megachile rotundata]
Length = 562
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 11 KSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVKNCFIRGS 68
K++ + +V+L+N+ S+CG + D Y+NI + D TDP D Y + + F++
Sbjct: 21 KAVENERTIVDLRNEASVCGIVEHADAYMNIVMRDCVFTDPRGDSYNYDM----FFVQAR 76
Query: 69 VVRYVQLP 76
+R+V +P
Sbjct: 77 NIRFVHIP 84
>gi|315051216|ref|XP_003174982.1| hypothetical protein MGYG_02512 [Arthroderma gypseum CBS 118893]
gi|311340297|gb|EFQ99499.1| hypothetical protein MGYG_02512 [Arthroderma gypseum CBS 118893]
Length = 124
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
M LL + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 1 MVSLLPLGLLNAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTSPEG-DRFFRL 59
Query: 61 KNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
++RG+ ++Y+++P + VD L +D + + +R
Sbjct: 60 PEVYVRGNNIKYLRVPEEVVD--LARDQQQNQQSGRSR 95
>gi|261195536|ref|XP_002624172.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239588044|gb|EEQ70687.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239610465|gb|EEQ87452.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis ER-3]
Length = 124
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPD-----KYPHML 58
+L + G ++VELKN ++ G L + D ++N+ L ++ T P+ + P M
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILREVVQTSPEGDRFFRLPEM- 59
Query: 59 SVKNCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
++RG+ ++Y+++P + VD L +D + + N R
Sbjct: 60 -----YVRGNNIKYLRVPEEVVD--LAKDQQQNQPSNRAR 92
>gi|367005821|ref|XP_003687642.1| hypothetical protein TPHA_0K00740 [Tetrapisispora phaffii CBS
4417]
gi|357525947|emb|CCE65208.1| hypothetical protein TPHA_0K00740 [Tetrapisispora phaffii CBS
4417]
Length = 197
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDI-----SVTDPDKYPHMLSVKNCFIRGSV 69
G+ + +ELKN +I GTL +VD ++N+ L+++ S + D ++++ ++RG+
Sbjct: 12 GQQMFIELKNGTTIQGTLTNVDNWMNLTLSNVVQVDNSEPNEDGKVEKITLEQIYLRGTH 71
Query: 70 VRYVQLPGDEVDT 82
++Y+ L D ++
Sbjct: 72 IKYINLQDDIIEN 84
>gi|295673314|ref|XP_002797203.1| small nuclear ribonucleoprotein Sm D1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|225681042|gb|EEH19326.1| small nuclear ribonucleoprotein Sm D1 [Paracoccidioides
brasiliensis Pb03]
gi|226282575|gb|EEH38141.1| small nuclear ribonucleoprotein Sm D1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226292265|gb|EEH47685.1| small nuclear ribonucleoprotein Sm D1 [Paracoccidioides
brasiliensis Pb18]
Length = 121
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P +S+ IRGS
Sbjct: 6 FLMKCANETVTIELKNGTILHGTITSVSPQMNTALRTVKMTTKGRDP--ISLDTINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ DA + +
Sbjct: 64 TIRYYILPDSLPLDTLLVDDAPKPK 88
>gi|389583620|dbj|GAB66354.1| U6 snRNA associated Sm-like protein Lsm4 [Plasmodium cynomolgi
strain B]
Length = 153
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
V+VELKN + G L D+++N+ + +I T D DK+ + C++RG+ V+Y+++
Sbjct: 43 VMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKF---WKISECYVRGNSVKYIRV 99
Query: 76 PGDEVDTQLLQDATRKEAVN 95
+D Q +++ ++A N
Sbjct: 100 QDQAID-QAIEETNEQKARN 118
>gi|325188130|emb|CCA22672.1| small nuclear ribonucleoprotein Sm D1 putative [Albugo laibachii
Nc14]
Length = 114
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P L IRG+
Sbjct: 6 FLMKLSNETVTIELKNGTIVHGTITGVDISMNTHLKAVKMTAKGKNPQTLDT--LSIRGN 63
Query: 69 VVRYVQLPGDEVDTQLLQDATRKEAVNA 96
+RY LP LL D T +E V A
Sbjct: 64 NIRYYILPDSLNLDVLLIDDTPREKVKA 91
>gi|156098332|ref|XP_001615198.1| U6 snRNA associated Sm-like protein Lsm4 [Plasmodium vivax Sal-1]
gi|148804072|gb|EDL45471.1| U6 snRNA associated Sm-like protein Lsm4, putative [Plasmodium
vivax]
Length = 127
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
+ K + V+VELKN + G L D+++N+ + +I T D DK+ + C++
Sbjct: 6 TLLKCSQNQPVMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKF---WKISECYV 62
Query: 66 RGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
RG+ V+Y+++ +D Q +++ ++A N
Sbjct: 63 RGNSVKYIRVQDQAID-QAIEETNEQKARN 91
>gi|444320507|ref|XP_004180910.1| hypothetical protein TBLA_0E03370 [Tetrapisispora blattae CBS
6284]
gi|387513953|emb|CCH61391.1| hypothetical protein TBLA_0E03370 [Tetrapisispora blattae CBS
6284]
Length = 144
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP-DKYPH 56
+F K L + + +ELKN +I GTL +V +N+ LTDI+++ P +K P
Sbjct: 3 LVNFLKKLRNEQLTIELKNGTTIWGTLQTVSPQMNVTLTDITLSLPTNKNPQ 54
>gi|328862497|gb|EGG11598.1| hypothetical protein MELLADRAFT_31042 [Melampsora larici-populina
98AG31]
Length = 108
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
GK ++VELKN + G L D ++N+ + ++ +T D + C+IRG+ ++Y++
Sbjct: 11 GKPMLVELKNGETFNGHLIQSDNFMNLTMREVYLTSSDG-EKFWKLSECYIRGNTIKYIR 69
Query: 75 LPGDEVDTQLLQDATRKEAVNATR 98
+ + +D Q+ + ++ + R
Sbjct: 70 VTDNVIDIVKQQEDSYRQQNRSAR 93
>gi|119193324|ref|XP_001247268.1| hypothetical protein CIMG_01039 [Coccidioides immitis RS]
gi|258574579|ref|XP_002541471.1| hypothetical protein UREG_00987 [Uncinocarpus reesii 1704]
gi|303312169|ref|XP_003066096.1| small nuclear ribonucleoprotein Sm D1, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|237901737|gb|EEP76138.1| hypothetical protein UREG_00987 [Uncinocarpus reesii 1704]
gi|240105758|gb|EER23951.1| small nuclear ribonucleoprotein Sm D1, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320040082|gb|EFW22016.1| small nuclear ribonucleoprotein SmD1 [Coccidioides posadasii str.
Silveira]
gi|392863489|gb|EAS35757.2| small nuclear ribonucleoprotein Sm D1 [Coccidioides immitis RS]
Length = 120
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P +S+ IRGS
Sbjct: 6 FLMKCANETVTIELKNGTILHGTIASVSPQMNTALRTVKMTPKGREP--ISLDTINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ D + +
Sbjct: 64 TIRYFILPDSLPLDTLLIDDTPKPK 88
>gi|340372719|ref|XP_003384891.1| PREDICTED: u7 snRNA-associated Sm-like protein LSm10-like
[Amphimedon queenslandica]
Length = 136
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + L VEL+N+++I GT+ +VD +N ++ D +++ +N FI+GS
Sbjct: 16 FLQGLQNCKTTVELRNEITIKGTIVNVDDKMNTTISGAEYKYLD--GTVMNCENLFIQGS 73
Query: 69 VVRYVQLPGD 78
+RYV +P D
Sbjct: 74 QIRYVHIPDD 83
>gi|281201359|gb|EFA75571.1| putative small nuclear ribonucleoparticle-associated protein
[Polysphondylium pallidum PN500]
Length = 150
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 10 FKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSV 69
F +L G + V+L+N+ I GT+ ++D+++NI+L++ ++ D S I
Sbjct: 17 FNALTGSQITVQLRNENEIYGTIDTIDEHMNIELSNATLKRRDTTD---SYDLILINSRN 73
Query: 70 VRYVQLPGDEVD 81
+RY+Q+P D +D
Sbjct: 74 IRYIQIP-DRID 84
>gi|301105595|ref|XP_002901881.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099219|gb|EEY57271.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 118
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
KS VG V ++LKND + G + V Q ++ L D T P+ ML F+ G
Sbjct: 17 LLKSFVGLRVRIDLKNDSVLEGVVQEVVQDMDFTLLDACETKPNGTTLMLD--EVFVMGK 74
Query: 69 VVRYVQLPGDEVDTQLLQDATRKEAVNAT 97
V YV +P TQ LQ TR +AT
Sbjct: 75 TVLYVHIPDRINITQHLQQYTRMIRQSAT 103
>gi|366990427|ref|XP_003674981.1| hypothetical protein NCAS_0B05250 [Naumovozyma castellii CBS
4309]
gi|342300845|emb|CCC68609.1| hypothetical protein NCAS_0B05250 [Naumovozyma castellii CBS
4309]
Length = 152
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
+F K L + V +ELKN ++ GTL +V +N LTD+ ++ P H +S
Sbjct: 3 LVNFLKKLRNEQVTIELKNGTTVWGTLQTVSPQMNATLTDVKLSLPHNSSHGVSA 57
>gi|440492342|gb|ELQ74917.1| Small nuclear ribonucleoprotein SMD1 [Trachipleistophora hominis]
Length = 88
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
F ++L K + +E K I GTL +D+ +NI LT+ ++ H V + FIRG
Sbjct: 5 QFLRTLKTKRLTIETKEKTIIKGTLTKIDKKMNIYLTNATI-------HNEPVDSYFIRG 57
Query: 68 SVVRYVQLPGDEV 80
+ VRYV + EV
Sbjct: 58 TQVRYVIVEESEV 70
>gi|170095247|ref|XP_001878844.1| small nuclear ribonucleoprotein SnRNP [Laccaria bicolor
S238N-H82]
gi|164646148|gb|EDR10394.1| small nuclear ribonucleoprotein SnRNP [Laccaria bicolor
S238N-H82]
Length = 127
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P L + IRG+
Sbjct: 6 FLMKLNNETVTIELKNGCIVHGTITGVDMQMNTHLKTVKMTMRNRDPTTLD--SLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
VRY LP +DT L+ DA + +
Sbjct: 64 TVRYFVLPDALPLDTLLVDDAPKPKG 89
>gi|115446977|ref|NP_001047268.1| Os02g0586500 [Oryza sativa Japonica Group]
gi|46806276|dbj|BAD17484.1| putative small nuclear ribonucleoprotein D1 polypeptide 16kDa;
snRNP core protein D1; Sm-D autoantigen [Oryza sativa
Japonica Group]
gi|113536799|dbj|BAF09182.1| Os02g0586500 [Oryza sativa Japonica Group]
gi|125582674|gb|EAZ23605.1| hypothetical protein OsJ_07305 [Oryza sativa Japonica Group]
Length = 114
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN ++ GT+ VD +N L + +T K P ++ + +RG+
Sbjct: 6 FLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNP--VTFDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEAVNAT 97
+RY LP ++T L++D R +A T
Sbjct: 64 NIRYYILPDSLNLETLLVEDTPRVKAKKPT 93
>gi|342870013|gb|EGU73372.1| hypothetical protein FOXB_16133 [Fusarium oxysporum Fo5176]
Length = 127
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L S D ++N+ L ++ T P+ + +
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEG-DRFVRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEA 93
+++G+ ++Y+++P DE+ Q+ Q T + +
Sbjct: 60 YVKGNNIKYLRVP-DEIIDQISQHLTTRHS 88
>gi|145243932|ref|XP_001394478.1| small nuclear ribonucleoprotein Sm D1 [Aspergillus niger CBS
513.88]
gi|134079163|emb|CAK40691.1| unnamed protein product [Aspergillus niger]
gi|350631277|gb|EHA19648.1| hypothetical protein ASPNIDRAFT_47972 [Aspergillus niger ATCC
1015]
gi|358367165|dbj|GAA83784.1| small nuclear ribonucleoprotein Sm D1 [Aspergillus kawachii IFO
4308]
Length = 121
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P +S+ IRGS
Sbjct: 6 FLMKCANETVTIELKNGTILHGTITSVSPQMNTSLRTVKMTPKGRDP--ISLDTINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ D RKEA
Sbjct: 64 TIRYYILPDSLPLDTLLIDDTPKPKNKARKEA 95
>gi|67523297|ref|XP_659709.1| hypothetical protein AN2105.2 [Aspergillus nidulans FGSC A4]
gi|40745781|gb|EAA64937.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259487477|tpe|CBF86187.1| TPA: small nuclear ribonucleoprotein SmD1, putative
(AFU_orthologue; AFUA_2G05110) [Aspergillus nidulans
FGSC A4]
Length = 121
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P +S+ IRGS
Sbjct: 6 FLMKCANETVTIELKNGTILHGTITSVSPQMNTSLRTVKMTPKGRDP--ISLDTINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ D RKEA
Sbjct: 64 TIRYYILPDSLPLDTLLIDDTPKPKNKARKEA 95
>gi|395526532|ref|XP_003765416.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10 [Sarcophilus
harrisii]
Length = 123
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G V+L+++ G + +VD ++NI+L +++ T D+ + + + F+ G
Sbjct: 20 LLQGLRGLVTTVDLRDETVARGRVDNVDAFMNIRLAEVTYT--DRQGQQVQLDDLFVTGR 77
Query: 69 VVRYVQLPGDEVD 81
VRYV +P DEVD
Sbjct: 78 NVRYVHIP-DEVD 89
>gi|156369567|ref|XP_001628047.1| predicted protein [Nematostella vectensis]
gi|156215013|gb|EDO35984.1| predicted protein [Nematostella vectensis]
Length = 120
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN I GT+ VD +N L + +T ++ P + +++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTVIHGTITGVDMSMNTHLKTVKMTVKNREP--MQLESLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA 88
+RY LP +DT L+ D
Sbjct: 64 NIRYFILPESLPLDTLLVDDT 84
>gi|327349106|gb|EGE77963.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 167
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G ++VELKN ++ G L + D ++N+ L ++ T P+ + ++RG+ ++Y++
Sbjct: 55 GHPMLVELKNGETLNGHLVNCDNWMNLILREVVQTSPEG-DRFFRLPEMYVRGNNIKYLR 113
Query: 75 LPGDEVDTQLLQDATRKEAVNATR 98
+P + VD L +D + + N R
Sbjct: 114 VPEEVVD--LAKDQQQNQPSNRAR 135
>gi|156336212|ref|XP_001619663.1| hypothetical protein NEMVEDRAFT_v1g223956 [Nematostella
vectensis]
gi|156203311|gb|EDO27563.1| predicted protein [Nematostella vectensis]
Length = 128
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN I GT+ VD +N L + +T ++ P + +++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTVIHGTITGVDMSMNTHLKTVKMTVKNREP--MQLESLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA 88
+RY LP +DT L+ D
Sbjct: 64 NIRYFILPESLPLDTLLVDDT 84
>gi|50759758|ref|XP_417768.1| PREDICTED: LSM10, U7 small nuclear RNA associated [Gallus gallus]
Length = 123
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G V+L+++ + G + +VD ++N++L +++ T D+ + + F+ G
Sbjct: 20 LLQGLHGHVTTVDLRDESTATGRVANVDAFMNMRLAEVTFT--DRRGEVSQLDEIFVTGR 77
Query: 69 VVRYVQLPGDEVD 81
VRYV +P DEVD
Sbjct: 78 NVRYVHIP-DEVD 89
>gi|380495060|emb|CCF32683.1| small nuclear ribonucleoprotein Sm D1 [Colletotrichum
higginsianum]
Length = 124
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T K +S+ IRGS
Sbjct: 6 FLMKCANETVTIELKNGTIVHGTITSVSPQMNTALRTVKMT--PKGQDAVSLDTMNIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ DA RKEA
Sbjct: 64 TIRYFILPDSLPLDTLLIDDAPKPKNKARKEA 95
>gi|310793785|gb|EFQ29246.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 124
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T K +S+ IRGS
Sbjct: 6 FLMKCANETVTIELKNGTIVHGTITSVSPQMNTALRTVKMT--PKGQDAVSLDTMNIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ DA RKEA
Sbjct: 64 TIRYFILPDSLPLDTLLIDDAPKPKNKARKEA 95
>gi|327304028|ref|XP_003236706.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326462048|gb|EGD87501.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 121
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTSPEG-DRFFRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
++RG+ ++Y+++P + VD Q +++ N
Sbjct: 60 YVRGNNIKYLRVPEEVVDLARDQQQSQQSGRN 91
>gi|429859869|gb|ELA34627.1| small nuclear ribonucleoprotein sm d1 [Colletotrichum
gloeosporioides Nara gc5]
Length = 177
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T K +S+ IRGS
Sbjct: 61 FLMKCANETVTIELKNGTIVHGTITSVSPQMNTALRTVKMT--PKGQDAVSLDTMNIRGS 118
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ DA RKEA
Sbjct: 119 TIRYFILPDSLPLDTLLIDDAPKPKNKARKEA 150
>gi|169617530|ref|XP_001802179.1| hypothetical protein SNOG_11947 [Phaeosphaeria nodorum SN15]
gi|111059239|gb|EAT80359.1| hypothetical protein SNOG_11947 [Phaeosphaeria nodorum SN15]
Length = 137
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V VELKN + GT+ SV +N+ L + T K +++ + +RGS
Sbjct: 6 FLMKCQNETVTVELKNGSIVNGTITSVSPLMNVALRTVKYT--PKSRDTVTLDSMTVRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY+ LP +DT L+ DA RKEA
Sbjct: 64 TIRYIILPDSLPLDTLLIDDAPKPKNKARKEA 95
>gi|336375284|gb|EGO03620.1| hypothetical protein SERLA73DRAFT_175163 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388346|gb|EGO29490.1| hypothetical protein SERLADRAFT_457290 [Serpula lacrymans var.
lacrymans S7.9]
Length = 121
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P S+ + IRG+
Sbjct: 6 FLMKLNNETVTIELKNGSVVHGTITGVDMQMNTHLKTVKMTTRNRDP--TSLDSLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP +DT L+ DA + +
Sbjct: 64 NIRYFVLPDALPLDTLLVDDAPKPKG 89
>gi|440791795|gb|ELR13033.1| LSM domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 131
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPG 77
++VELKN + G L + D ++NI L D+ T D + C+IRG+ ++Y+ +P
Sbjct: 1 MLVELKNGETYNGHLVNCDGWMNINLRDVICTSRDG-ERFWRIPQCYIRGNTIKYLCIPD 59
Query: 78 DEVD 81
+ +D
Sbjct: 60 EVID 63
>gi|299742717|ref|XP_001832694.2| small nuclear riboprotein Sm-D [Coprinopsis cinerea okayama7#130]
gi|298405314|gb|EAU89114.2| small nuclear riboprotein Sm-D [Coprinopsis cinerea okayama7#130]
Length = 136
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
+F L + V +ELKN + GT+ VD +N L + +T ++ P S+ IRG
Sbjct: 21 AFLMKLNNETVTIELKNGAVVHGTITGVDMQMNTFLKTVKMTMRNREP--TSLDTLSIRG 78
Query: 68 SVVRYVQLPGD-EVDTQLLQDATRKE 92
+ +RY LP +DT L+ DA + +
Sbjct: 79 NNIRYFILPDALPLDTLLVDDAPKPK 104
>gi|158285999|ref|XP_308555.4| AGAP007246-PA [Anopheles gambiae str. PEST]
gi|157020260|gb|EAA04383.5| AGAP007246-PA [Anopheles gambiae str. PEST]
Length = 126
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P +++ + IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTITGVDVAMNTHLKAVKMTIKNRDP--VTLDSLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP ++T L+ DA + A
Sbjct: 64 NIRYYILPDSLPLETLLIDDAPKTRA 89
>gi|45190808|ref|NP_985062.1| AER205Wp [Ashbya gossypii ATCC 10895]
gi|44983850|gb|AAS52886.1| AER205Wp [Ashbya gossypii ATCC 10895]
gi|374108287|gb|AEY97194.1| FAER205Wp [Ashbya gossypii FDAG1]
Length = 144
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
F L + V +ELKN ++ GTL +V +N LTD+ ++ P K P ++ + ++
Sbjct: 3 LAGFLMKLRSEQVTIELKNGTTVWGTLQTVSPQMNATLTDVRLSLPAKAPKS-ALASVYL 61
Query: 66 RGSV--------------VRYVQLPGDEVDTQLLQDA 88
GS ++Y+ + G+ + +L D+
Sbjct: 62 TGSAPESDASQEDRRTASLQYINIRGNTIRQIILPDS 98
>gi|357017089|gb|AET50573.1| hypothetical protein [Eimeria tenella]
Length = 125
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + +V+ELKN + GT+ VD +N L ++ +T K+ + +S+ + IRGS
Sbjct: 6 FLMRLANETLVLELKNGTVVHGTIVGVDVAMNTHLKNVKLT--VKHSNPVSMDHLTIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA 88
+RY LP +DT L+ D
Sbjct: 64 NIRYFILPDSLPLDTLLIDDT 84
>gi|358378050|gb|EHK15733.1| hypothetical protein TRIVIDRAFT_64379 [Trichoderma virens Gv29-8]
Length = 120
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N+ L + +T + L N IRGS
Sbjct: 6 FLMKCANETVTIELKNGTIVHGTISSVTPQMNVALRTVKMTARGQDSIALDTMN--IRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ DA RKEA
Sbjct: 64 TIRYFILPDSLPLDTLLIDDAPKPKNKARKEA 95
>gi|126133080|ref|XP_001383065.1| hypothetical protein PICST_54497 [Scheffersomyces stipitis CBS
6054]
gi|126094890|gb|ABN65036.1| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 147
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 16 KDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQL 75
K +++ELKN ++ G L + D ++N+ L D+ T + L + +IRG+ ++Y++L
Sbjct: 13 KQILIELKNGETLNGGLVNCDSWMNLTLKDVIQTSSNG-ETFLKIPEVYIRGNHIKYLRL 71
Query: 76 PGDEVD 81
P + +D
Sbjct: 72 PEEIMD 77
>gi|255712609|ref|XP_002552587.1| KLTH0C08382p [Lachancea thermotolerans]
gi|238933966|emb|CAR22149.1| KLTH0C08382p [Lachancea thermotolerans CBS 6340]
Length = 139
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG- 67
F L + V +ELKN ++ GTL +V +N LTD+ ++ P+K + +V + F+ G
Sbjct: 6 FLMKLRNEQVTIELKNGTTVWGTLQTVSPQMNATLTDVKLSLPNKSGNS-AVASVFLSGG 64
Query: 68 --------SVVRYVQLPGDEVDTQLLQDA 88
+ ++Y+ + G+ + +L D+
Sbjct: 65 QRNSEQKTTSLQYINIRGNTIRQIILPDS 93
>gi|226372678|gb|ACO51964.1| U7 snRNA-associated Sm-like protein LSm10 [Rana catesbeiana]
Length = 121
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G VEL+++ S G++ +VD ++N++L ++ TD L + FI G
Sbjct: 20 LLQGLHGHATTVELRDESSAKGSVINVDAFMNVRLEKVTYTDRRGKESKLD--DLFINGR 77
Query: 69 VVRYVQLPGDEVD 81
VRY+ +P +EVD
Sbjct: 78 NVRYIHIP-EEVD 89
>gi|328774253|gb|EGF84290.1| hypothetical protein BATDEDRAFT_85018 [Batrachochytrium
dendrobatidis JAM81]
Length = 132
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S G +++ELKN + G L + D Y+N+ L ++ T D +
Sbjct: 1 MLPLSLLNKAQGHPMLIELKNGDTFNGHLVNCDPYMNVNLREVIRTSADGE-KFWKIPEI 59
Query: 64 FIRGSVVRYVQLPGDEV 80
+IRGS ++Y+++P DE+
Sbjct: 60 YIRGSTIKYLRVP-DEI 75
>gi|389632099|ref|XP_003713702.1| small nuclear ribonucleoprotein Sm D1 [Magnaporthe oryzae 70-15]
gi|351646035|gb|EHA53895.1| small nuclear ribonucleoprotein Sm D1 [Magnaporthe oryzae 70-15]
gi|440473990|gb|ELQ42759.1| small nuclear ribonucleoprotein Sm D1 [Magnaporthe oryzae Y34]
gi|440485032|gb|ELQ65031.1| small nuclear ribonucleoprotein Sm D1 [Magnaporthe oryzae P131]
Length = 125
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L ++ +T + P L N IRGS
Sbjct: 6 FLMKCANETVTIELKNGTIVHGTIASVSPQMNTALRNVKMTPRGQDPIPLDAMN--IRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ D + +
Sbjct: 64 TIRYYILPDSLPLDTLLVDDTPKPK 88
>gi|440903491|gb|ELR54142.1| Small nuclear ribonucleoprotein Sm D1, partial [Bos grunniens
mutus]
Length = 117
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
Y F L + V +ELKN + GT+ VD +N L + +T ++ P + ++ I
Sbjct: 1 LYRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLETLSI 58
Query: 66 RGSVVRYVQLP 76
RG+ +RY LP
Sbjct: 59 RGNNIRYFILP 69
>gi|261195138|ref|XP_002623973.1| small nuclear ribonucleoprotein Sm D1 [Ajellomyces dermatitidis
SLH14081]
gi|239587845|gb|EEQ70488.1| small nuclear ribonucleoprotein Sm D1 [Ajellomyces dermatitidis
SLH14081]
gi|239610667|gb|EEQ87654.1| small nuclear ribonucleoprotein Sm D1 [Ajellomyces dermatitidis
ER-3]
Length = 123
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P +S+ IRGS
Sbjct: 6 FLMKCANETVTIELKNGTILHGTITSVSPQMNTALRTVKMTPKGRDP--ISLDTINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ D RKEA
Sbjct: 64 TIRYYILPDSLPLDTLLVDDTPKPKNKARKEA 95
>gi|154281585|ref|XP_001541605.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411784|gb|EDN07172.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|225563163|gb|EEH11442.1| small nuclear ribonucleoprotein Sm D1 [Ajellomyces capsulatus
G186AR]
Length = 123
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P +S+ IRGS
Sbjct: 6 FLMKCANETVTIELKNGTILHGTIASVSPQMNTALRTVKMTAKGRDP--ISLDTINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ D RKEA
Sbjct: 64 TIRYYILPDSLPLDTLLVDDTPKPKNKARKEA 95
>gi|403174347|ref|XP_003333333.2| hypothetical protein PGTG_15117 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170935|gb|EFP88914.2| hypothetical protein PGTG_15117 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 248
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + GK ++VELKN + G L D ++N+ + ++ T + + C
Sbjct: 100 MLPLALLHGAQGKPMLVELKNGETFNGHLIQCDNFMNLTMREVYQTSANG-EQFWKLPEC 158
Query: 64 FIRGSVVRYVQLPGDEVDT-QLLQDATRKE 92
+IRG+ ++Y+++ + +D + +DA R++
Sbjct: 159 YIRGNTIKYIRVTDNVIDQVKQQEDAYRQQ 188
>gi|448085360|ref|XP_004195840.1| Piso0_005263 [Millerozyma farinosa CBS 7064]
gi|359377262|emb|CCE85645.1| Piso0_005263 [Millerozyma farinosa CBS 7064]
Length = 126
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
S + ++VELKN ++ G L + D ++N+ L ++ + + L + C++RG+
Sbjct: 6 LLTSAKNQPILVELKNGETLNGELVNCDSWMNLTLNNVIQVSANG-TNFLKLPECYVRGN 64
Query: 69 VVRYVQLPGDEVD 81
++Y++LP + +D
Sbjct: 65 HIKYMRLPEELMD 77
>gi|401400718|ref|XP_003880841.1| sm protein, related [Neospora caninum Liverpool]
gi|325115253|emb|CBZ50808.1| sm protein, related [Neospora caninum Liverpool]
Length = 121
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + +V+ELKN I GT+ VD +N L ++ +T K+ + S+++ IRG+
Sbjct: 6 FLMRLANETLVIELKNGTVIHGTVVGVDISMNTHLKNVKMT--LKHGNPTSLEHLTIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDAT-RKEAVNATR 98
+RY LP +DT L+ D ++ A A R
Sbjct: 64 NIRYFILPDSLPLDTLLIDDTPLQRPAREAGR 95
>gi|237839011|ref|XP_002368803.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211966467|gb|EEB01663.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221481300|gb|EEE19694.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii GT1]
gi|221502024|gb|EEE27770.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii VEG]
Length = 121
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + +V+ELKN I GT+ VD +N L ++ +T P S+++ IRG+
Sbjct: 6 FLMRLANETLVIELKNGTVIHGTVVGVDISMNTHLKNVKMTMKQGNP--TSLEHLTIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDAT-RKEAVNATR 98
+RY LP +DT L+ D ++ A A R
Sbjct: 64 NIRYFILPDSLPLDTLLIDDTPLQRPAREAGR 95
>gi|393905582|gb|EFO18954.2| hypothetical protein LOAG_09541 [Loa loa]
Length = 135
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L S ++ ++VELK+ + G L + D ++NI L D T D D++ L ++
Sbjct: 2 VLPLSLLRTAQNHPMLVELKSGETYNGHLVACDAWMNIHLRDAICTSRDGDRF---LKMQ 58
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
++RGS ++Y+++P D V+
Sbjct: 59 EVYVRGSTIKYLRIPDDVVE 78
>gi|358365662|dbj|GAA82284.1| U6 snRNA-associated Sm-like protein LSM4 [Aspergillus kawachii
IFO 4308]
Length = 121
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L S D ++N+ L ++ T P+ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLASCDNWMNLILKEVVQTSPEG-DRFFRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
++RG+ ++Y+++P + ++ Q A + +
Sbjct: 60 YVRGNNIKYLRIPEEIIEMVKEQQANQSQ 88
>gi|302831786|ref|XP_002947458.1| hypothetical protein VOLCADRAFT_79613 [Volvox carteri f.
nagariensis]
gi|300267322|gb|EFJ51506.1| hypothetical protein VOLCADRAFT_79613 [Volvox carteri f.
nagariensis]
Length = 140
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S K+ V+VELKN + G L D ++N+ L+++ T D +
Sbjct: 1 MLPLSLLKTAQRHAVLVELKNGETYNGYLQQCDTWMNLHLSEVICTSKDGQ-RFFKMPEA 59
Query: 64 FIRGSVVRYVQLPGD 78
+IRG+ ++Y+ +P +
Sbjct: 60 YIRGNTIKYISVPEE 74
>gi|388581808|gb|EIM22115.1| U6 snRNA-associated Sm-like protein LSm6 [Wallemia sebi CBS
633.66]
Length = 87
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDI-SVTDPDKYPHMLSVKNCFIR 66
+F K++VGK VVV+L + + G L +D Y+N+ +TD+ + P + FIR
Sbjct: 15 AFLKAIVGKSVVVKLNSGLLYTGILQCLDGYMNLVITDVRESSGIAGSPITSTYGEAFIR 74
Query: 67 GSVVRYVQ 74
G+ V Y+
Sbjct: 75 GNNVLYIS 82
>gi|345327225|ref|XP_001510929.2| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like
[Ornithorhynchus anatinus]
Length = 203
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ LVG+ V+++++ G + +VD ++NI+L ++ T D++ + + + F+ G
Sbjct: 20 LLQGLVGQVTTVDMRDESLARGRVANVDAFMNIRLDQVTYT--DRWGREVQLDDLFVAGR 77
Query: 69 VVRYVQLPGDEVD 81
VRYV +P D VD
Sbjct: 78 SVRYVHIP-DGVD 89
>gi|71020725|ref|XP_760593.1| hypothetical protein UM04446.1 [Ustilago maydis 521]
gi|46100481|gb|EAK85714.1| hypothetical protein UM04446.1 [Ustilago maydis 521]
Length = 146
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + K ++VELKN + G L + D ++N+ L ++ T K C
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGSTFNGHLVACDNFMNLTLREVYETSASG-EQFWKQKEC 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQ 86
+IRGS ++Y ++ D V Q+ Q
Sbjct: 60 YIRGSTIKYCRVA-DSVIDQVRQ 81
>gi|440302063|gb|ELP94416.1| small nuclear ribonucleoprotein sm D1, putative [Entamoeba
invadens IP1]
Length = 111
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + + +ELK+ + GT+ VD Y+NI L + +T K P +++ IRG+
Sbjct: 6 FLMRLTNEVLTIELKDGSIVTGTVVGVDNYMNIHLKVVQLTPKGKNP--ITLDQSTIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+R + LP +DT L+ D R
Sbjct: 64 NIRNIILPETLNLDTYLIDDTPR 86
>gi|317147121|ref|XP_003189888.1| U6 snRNA-associated Sm-like protein LSm4 [Aspergillus oryzae
RIB40]
Length = 121
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L + D ++N+ L ++ T P D++ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRF---FRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
+IRG+ ++Y+++P E +++++ + + N R
Sbjct: 58 EVYIRGNNIKYLRIP--EEIIEMVKEQPQNQPSNRNR 92
>gi|389609361|dbj|BAM18292.1| small ribonucleoprotein particle protein SmD1 [Papilio xuthus]
Length = 125
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + VT +K L ++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNK--EELQLETLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T LL DA +
Sbjct: 64 NIRYYLLPDSLPIETLLLDDAPK 86
>gi|297602887|ref|NP_001053049.2| Os04g0470200 [Oryza sativa Japonica Group]
gi|38344744|emb|CAE03048.2| OSJNBa0089K21.2 [Oryza sativa Japonica Group]
gi|116310018|emb|CAH67043.1| OSIGBa0124N08.5 [Oryza sativa Indica Group]
gi|222629031|gb|EEE61163.1| hypothetical protein OsJ_15131 [Oryza sativa Japonica Group]
gi|255675540|dbj|BAF14963.2| Os04g0470200 [Oryza sativa Japonica Group]
Length = 114
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEAVNAT 97
+RY LP ++T L++D R +A T
Sbjct: 64 NIRYYILPDSLNLETLLVEDTPRVKAKKPT 93
>gi|326470583|gb|EGD94592.1| small nuclear ribonucleoprotein [Trichophyton tonsurans CBS
112818]
gi|326484638|gb|EGE08648.1| small nuclear ribonucleoprotein [Trichophyton equinum CBS 127.97]
Length = 121
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTSPEG-DRFFRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
++RG+ ++Y+++P + VD Q ++ N
Sbjct: 60 YVRGNNIKYLRVPEEVVDLARDQQQNQQSGRN 91
>gi|388855373|emb|CCF51037.1| related to U6 snRNA-associated Sm-like protein LSm4 [Ustilago
hordei]
Length = 149
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + K ++VELKN + G L + D ++N+ L ++ T K C
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGSTFNGHLVACDNFMNLTLREVYETSASG-EQFWKQKEC 59
Query: 64 FIRGSVVRYVQLPGDEVD 81
+IRGS ++Y ++ +D
Sbjct: 60 YIRGSTIKYCRVADSVID 77
>gi|237842601|ref|XP_002370598.1| U6 snRNA associated Sm-like protein LSm4, putative [Toxoplasma
gondii ME49]
gi|211968262|gb|EEB03458.1| U6 snRNA associated Sm-like protein LSm4, putative [Toxoplasma
gondii ME49]
gi|221502719|gb|EEE28439.1| small nuclear ribonucleoprotein sm, putative [Toxoplasma gondii
VEG]
Length = 214
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
+ ++ + ++VELK+ + G L S D ++N+ L D T D + C+IRG
Sbjct: 6 TLLRAAQNRPMMVELKSGETYSGLLASCDGFMNLHLKDSVCTSKDGE-RFWKLSECYIRG 64
Query: 68 SVVRYVQLPGDEVDT 82
++V+Y++L + ++T
Sbjct: 65 NMVKYIRLQDEVLET 79
>gi|47212040|emb|CAF92642.1| unnamed protein product [Tetraodon nigroviridis]
Length = 115
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+N+ + G + SVD ++N++L +V D+ + ++++ F+ G
Sbjct: 15 LLQGLQGEVTTVDLRNECTARGRIVSVDAFMNMRLE--AVLYRDRRGQLANMQDLFVTGR 72
Query: 69 VVRYVQLPGDEVD 81
VRYV +P D VD
Sbjct: 73 NVRYVHVP-DHVD 84
>gi|448515600|ref|XP_003867370.1| Smx3 protein [Candida orthopsilosis Co 90-125]
gi|380351709|emb|CCG21932.1| Smx3 protein [Candida orthopsilosis]
Length = 130
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 9 FFKSLVGKDVVVELK-NDVSICGTLHSVDQYLNIKLTDIS--VTDPDKYPHMLSVKNCFI 65
F KSL+GK VVV LK N G L S D YLN++L + + D + P ++ + FI
Sbjct: 12 FMKSLIGKQVVVRLKWNKTEYRGQLISTDNYLNLQLDNTFEIIYDNEDKPREEAIGSIFI 71
Query: 66 RGSVVRYVQLPGD-EVDTQLLQDATRKEAVNATR 98
R + V +++ D E ++++ K+A A +
Sbjct: 72 RCNNVLFIREHKDQEAESKIPAKEESKKAKEADK 105
>gi|307107546|gb|EFN55788.1| hypothetical protein CHLNCDRAFT_22901 [Chlorella variabilis]
Length = 132
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L K+ V++ELKN + G + D ++NI L ++ T D D++ M
Sbjct: 1 MLPLVLLKTAAAHPVLIELKNGETYNGHMVQCDTWMNIHLREVICTSKDGDRFWRM---P 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
+IRG+ ++Y+++P + +D D R E
Sbjct: 58 EAYIRGNTIKYLRVPDEVLDKAKEADFRRDE 88
>gi|340054663|emb|CCC48964.1| putative small nuclear ribonucleoprotein [Trypanosoma vivax Y486]
Length = 100
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 2 ERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK 61
E F + L G V +EL N G + V+ +N + + +T+ K P + V+
Sbjct: 5 ENSTLIGFLQQLRGTLVEIELNNSTVASGEIAFVEPNMNTHMRHVKITEKGKNPEL--VE 62
Query: 62 NCFIRGSVVRYVQLP 76
+RGS +RYV LP
Sbjct: 63 TYMVRGSKIRYVILP 77
>gi|196003304|ref|XP_002111519.1| hypothetical protein TRIADDRAFT_55621 [Trichoplax adhaerens]
gi|190585418|gb|EDV25486.1| hypothetical protein TRIADDRAFT_55621 [Trichoplax adhaerens]
Length = 130
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + + V +ELKN + GT+ VD +N L + +T ++ P +++ IRG+
Sbjct: 6 FLMKINHETVTIELKNGTVVHGTVWGVDMSMNTHLKSVKMTVKNREP--VTLDTLAIRGN 63
Query: 69 VVRYVQLPGDEVDTQLLQDATRK 91
+RY LP + QLL D + K
Sbjct: 64 NIRYFILPDNLALDQLLVDDSPK 86
>gi|409048487|gb|EKM57965.1| hypothetical protein PHACADRAFT_251891 [Phanerochaete carnosa
HHB-10118-sp]
Length = 122
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P S+ + IRG+
Sbjct: 6 FLMKLNNETVTIELKNGSIVHGTITGVDMQMNTHLKTVKMTARNRDP--TSLDSLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ DA + +
Sbjct: 64 NIRYFVLPDALPLDTLLVDDAPKPK 88
>gi|452004429|gb|EMD96885.1| hypothetical protein COCHEDRAFT_1163040 [Cochliobolus
heterostrophus C5]
Length = 130
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V VELKN + GT+ SV +N+ L + T K +++ +RGS
Sbjct: 6 FLMKCQNETVTVELKNGTIVNGTITSVSPLMNVALRAVKYT--PKSRDTVALDTMTVRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY+ LP +DT L+ DA + +
Sbjct: 64 TIRYIILPDSLPLDTLLIDDAPKPK 88
>gi|451855386|gb|EMD68678.1| hypothetical protein COCSADRAFT_157089 [Cochliobolus sativus
ND90Pr]
Length = 131
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V VELKN + GT+ SV +N+ L + T K +++ +RGS
Sbjct: 6 FLMKCQNETVTVELKNGTIVNGTITSVSPLMNVALRAVKYT--PKSRDTVALDTMTVRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY+ LP +DT L+ DA + +
Sbjct: 64 TIRYIILPDSLPLDTLLIDDAPKPK 88
>gi|295674033|ref|XP_002797562.1| small nuclear ribonucleoprotein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280212|gb|EEH35778.1| small nuclear ribonucleoprotein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 124
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTTPEG-DRFFRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
++RG+ ++Y+++P + VD L +D + + N R
Sbjct: 60 YVRGNNIKYLRVPEEIVD--LAKDQQQNQPSNRGR 92
>gi|238496529|ref|XP_002379500.1| U6 snRNA-associated Sm-like protein LSM4, putative [Aspergillus
flavus NRRL3357]
gi|220694380|gb|EED50724.1| U6 snRNA-associated Sm-like protein LSM4, putative [Aspergillus
flavus NRRL3357]
gi|391868822|gb|EIT78031.1| small nuclear ribonucleoprotein [Aspergillus oryzae 3.042]
Length = 121
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L + D ++N+ L ++ T P D++ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRF---FRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
+IRG+ ++Y+++P E +++++ + + N R
Sbjct: 58 EVYIRGNNIKYLRIP--EEIIEMVKEQQQNQPSNRNR 92
>gi|444323153|ref|XP_004182217.1| hypothetical protein TBLA_0I00350 [Tetrapisispora blattae CBS
6284]
gi|387515264|emb|CCH62698.1| hypothetical protein TBLA_0I00350 [Tetrapisispora blattae CBS
6284]
Length = 196
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKY---PHMLSVKN--CFIRGSV 69
G+ + +ELKN + G L +VD ++N+ LT++S + + P + VK+ ++RG+
Sbjct: 12 GQKMTIELKNGEVVEGELTNVDNWMNLTLTNVSQHNGSDFISGPQVEVVKSKEIYLRGTY 71
Query: 70 VRYVQLPGDEVD 81
++Y+ L D +D
Sbjct: 72 IKYISLQKDIID 83
>gi|169770091|ref|XP_001819515.1| small nuclear ribonucleoprotein Sm D1 [Aspergillus oryzae RIB40]
gi|238487546|ref|XP_002375011.1| small nuclear ribonucleoprotein SmD1, putative [Aspergillus
flavus NRRL3357]
gi|83767374|dbj|BAE57513.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220699890|gb|EED56229.1| small nuclear ribonucleoprotein SmD1, putative [Aspergillus
flavus NRRL3357]
gi|391864024|gb|EIT73322.1| small nuclear ribonucleoprotein [Aspergillus oryzae 3.042]
Length = 123
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P +S+ IRGS
Sbjct: 6 FLMKCANETVTIELKNGTILHGTITSVSPQMNTSLRTVKMTPKGRDP--ISLDTINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQD------ATRKEA 93
+RY LP +DT L+ D RKEA
Sbjct: 64 TIRYYILPDSLPLDTLLVDDQPKPKNKARKEA 95
>gi|330943683|ref|XP_003306243.1| hypothetical protein PTT_19359 [Pyrenophora teres f. teres 0-1]
gi|311316316|gb|EFQ85673.1| hypothetical protein PTT_19359 [Pyrenophora teres f. teres 0-1]
Length = 132
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V VELKN + GT+ SV +N+ L + T K +++ +RGS
Sbjct: 6 FLMKCQNETVTVELKNGTIVNGTITSVSPLMNVALRAVKYT--PKSRDTVALDTMTVRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY+ LP +DT L+ DA + +
Sbjct: 64 TIRYIILPDSLPLDTLLIDDAPKPK 88
>gi|189200737|ref|XP_001936705.1| small nuclear ribonucleoprotein Sm D1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983804|gb|EDU49292.1| small nuclear ribonucleoprotein Sm D1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 132
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V VELKN + GT+ SV +N+ L + T K +++ +RGS
Sbjct: 6 FLMKCQNETVTVELKNGTIVNGTITSVSPLMNVALRAVKYT--PKSRDTVALDTMTVRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY+ LP +DT L+ DA + +
Sbjct: 64 TIRYIILPDSLPLDTLLIDDAPKPK 88
>gi|393212701|gb|EJC98200.1| Sm-like ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 119
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
F L + V +ELKN + GT+ VD +N L + +T ++ P S+ I
Sbjct: 3 LVRFLMKLNNETVTIELKNGSIVHGTITGVDMQMNTHLKTVKMTMRNRDPQ--SLDTLSI 60
Query: 66 RGSVVRYVQLPGD-EVDTQLLQDATR 90
RG+ +RY LP +DT L+ DA +
Sbjct: 61 RGNNIRYFVLPDALPLDTLLVDDAPK 86
>gi|343425727|emb|CBQ69261.1| related to U6 snRNA-associated Sm-like protein LSm4 [Sporisorium
reilianum SRZ2]
Length = 142
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S + K ++VELKN + G L + D ++N+ L ++ T K C
Sbjct: 1 MLPLSLLNAAQNKPMLVELKNGSTFNGHLVACDNFMNLTLREVYETSASG-EQFWKQKEC 59
Query: 64 FIRGSVVRYVQLPGDEVD 81
+IRGS ++Y ++ +D
Sbjct: 60 YIRGSTIKYCRVADSVID 77
>gi|115399152|ref|XP_001215165.1| small nuclear ribonucleoprotein Sm D1 [Aspergillus terreus
NIH2624]
gi|114192048|gb|EAU33748.1| small nuclear ribonucleoprotein Sm D1 [Aspergillus terreus
NIH2624]
Length = 121
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P +S+ IRGS
Sbjct: 6 FLMKCANETVTIELKNGTILHGTITSVSPQMNTALRTVKMTPKGRDP--ISLDTINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQD------ATRKEA 93
+RY LP +DT L+ D RKEA
Sbjct: 64 TIRYYILPDSLPLDTLLVDDQPKPKNKARKEA 95
>gi|443922492|gb|ELU41935.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 122
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V VELKN + GTL VD +N L ++ +T ++ P L IRG+
Sbjct: 6 FLMKLNNETVTVELKNGSVVHGTLTGVDVQMNTHLKNVKLTSRNREPTALDT--LSIRGN 63
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 64 NIRYFVLP 71
>gi|336270436|ref|XP_003349977.1| hypothetical protein SMAC_00869 [Sordaria macrospora k-hell]
gi|380095367|emb|CCC06840.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 130
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L D ++N+ L ++ T P DK+ + V
Sbjct: 1 MLPLGILTAAQGHPMLVELKNGETLNGHLIQCDTWMNLTLREVVQTSPEGDKFARLPEV- 59
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P D +D
Sbjct: 60 --YVKGNNIKYLRVPDDVID 77
>gi|336470904|gb|EGO59065.1| hypothetical protein NEUTE1DRAFT_116371 [Neurospora tetrasperma
FGSC 2508]
gi|350291974|gb|EGZ73169.1| Sm-like ribonucleoprotein [Neurospora tetrasperma FGSC 2509]
Length = 130
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L D ++N+ L ++ T P DK+ + ++
Sbjct: 1 MLPLGILTAAQGHPMLVELKNGETLNGHLIQCDTWMNLTLREVVQTSPEGDKF---VRLR 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P D +D
Sbjct: 58 EVYVKGNNIKYLRVPDDVID 77
>gi|290984572|ref|XP_002675001.1| predicted protein [Naegleria gruberi]
gi|284088594|gb|EFC42257.1| predicted protein [Naegleria gruberi]
Length = 130
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELKN + GTL + DQ++N+ L D++ T D + +IRG ++Y+++
Sbjct: 1 MLVELKNGETFNGTLTNCDQFMNMNLEDVTCTSRDG-TRFWKMDKVYIRGYTLKYIRI 57
>gi|330038573|ref|XP_003239635.1| small nuclear ribonucleoprotein D1 [Cryptomonas paramecium]
gi|327206559|gb|AEA38737.1| small nuclear ribonucleoprotein D1 [Cryptomonas paramecium]
Length = 88
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 10 FKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSV 69
F ++ + V +ELKN + + G + + D+Y+NI L I T+ K L +++ IRGS
Sbjct: 6 FYEILNETVTIELKNGLILHGIMLNADKYMNIYLKKIKKTNFSKIN--LEIESISIRGSS 63
Query: 70 VRYVQLP 76
++Y+ LP
Sbjct: 64 IKYLILP 70
>gi|398365525|ref|NP_011588.3| Smd1p [Saccharomyces cerevisiae S288c]
gi|417779|sp|Q02260.1|SMD1_YEAST RecName: Full=Small nuclear ribonucleoprotein Sm D1; Short=Sm-D1;
AltName: Full=snRNP core protein D1
gi|172624|gb|AAA35055.1| D1 snRNP [Saccharomyces cerevisiae]
gi|264807|gb|AAB25229.1| core snRNP polypeptide D1, Smd1p=SMD1 product [Saccharomyces
cerevisiae=yeast, Peptide, 146 aa]
gi|1323102|emb|CAA97076.1| SMD1 [Saccharomyces cerevisiae]
gi|51013145|gb|AAT92866.1| YGR074W [Saccharomyces cerevisiae]
gi|151943351|gb|EDN61664.1| Sm D1 [Saccharomyces cerevisiae YJM789]
gi|190406906|gb|EDV10173.1| small nuclear ribonucleoprotein Sm D1 [Saccharomyces cerevisiae
RM11-1a]
gi|256269109|gb|EEU04445.1| Smd1p [Saccharomyces cerevisiae JAY291]
gi|259146577|emb|CAY79834.1| Smd1p [Saccharomyces cerevisiae EC1118]
gi|285812267|tpg|DAA08167.1| TPA: Smd1p [Saccharomyces cerevisiae S288c]
gi|349578285|dbj|GAA23451.1| K7_Smd1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 146
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP 51
+F K L + V +ELKN ++ GTL SV +N LTD+ +T P
Sbjct: 3 LVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLP 48
>gi|395329081|gb|EJF61470.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 112
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 13 LVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRY 72
L + V VELKN I GT+ VD +N L + +T ++ P S+ + IRG+ +RY
Sbjct: 3 LNNETVTVELKNGSVIHGTITGVDMQMNTHLKTVKMTARNREP--TSLDSLSIRGNNIRY 60
Query: 73 VQLPGD-EVDTQLLQDATR 90
LP +DT L+ DA +
Sbjct: 61 FVLPDALPLDTLLVDDAPK 79
>gi|255932631|ref|XP_002557872.1| Pc12g10510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582491|emb|CAP80678.1| Pc12g10510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 123
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V VELKN + GT+ SV +N L + +T + P L N +RGS
Sbjct: 6 FLMKCANETVTVELKNGTILHGTIVSVSPQMNTSLRAVKMTPKGRDPVSLDTIN--VRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ DA + +
Sbjct: 64 TIRYYILPDSLPLDTLLVDDAPKPK 88
>gi|358391553|gb|EHK40957.1| hypothetical protein TRIATDRAFT_301687 [Trichoderma atroviride
IMI 206040]
Length = 120
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V VELKN + GT+ SV +N+ L + +T + L++ IRGS
Sbjct: 6 FLMKCSNETVTVELKNGTIVHGTISSVSPQMNVALRTVKMT--ARGQDSLALDTMNIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ DA + +
Sbjct: 64 TIRYFILPDSLPLDTLLIDDAPKPK 88
>gi|157105264|ref|XP_001648790.1| small nuclear ribonucleoprotein sm d1 [Aedes aegypti]
gi|157118312|ref|XP_001653165.1| small nuclear ribonucleoprotein sm d1 [Aedes aegypti]
gi|108880134|gb|EAT44359.1| AAEL004263-PA [Aedes aegypti]
gi|108883288|gb|EAT47513.1| AAEL001382-PA [Aedes aegypti]
Length = 126
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + + + IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTITGVDVAMNTHLKAVKMTIKNRDP--VQLDSLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP ++T L+ DA + A
Sbjct: 64 NIRYYILPDSLPLETLLIDDAPKTRA 89
>gi|355701859|gb|EHH29212.1| Small nuclear ribonucleoprotein Sm D1, partial [Macaca mulatta]
gi|355754930|gb|EHH58797.1| Small nuclear ribonucleoprotein Sm D1, partial [Macaca
fascicularis]
Length = 119
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
Y F L + V +ELKN + GT+ VD +N L + +T ++ P + ++ I
Sbjct: 3 IYRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLETLSI 60
Query: 66 RGSVVRYVQLP 76
RG+ +RY LP
Sbjct: 61 RGNNIRYFILP 71
>gi|189197851|ref|XP_001935263.1| hypothetical protein PTRG_04930 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187981211|gb|EDU47837.1| hypothetical protein PTRG_04930 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 131
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L + G ++VELK+ ++ G L + D ++N+ L ++ T D DK+ + +
Sbjct: 1 MLPLGLLTAATGHPMLVELKSGETLNGLLVNCDTWMNLTLREVVQTSADGDKF---MKLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
++RGS ++Y+++P + VD
Sbjct: 58 EIYVRGSTIKYLRVPDEIVD 77
>gi|410911580|ref|XP_003969268.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like [Takifugu
rubripes]
Length = 135
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+N+ + G + +VD ++NI+L +V D+ + ++++ F+ G
Sbjct: 33 LLQGLQGEVTTVDLRNECTARGRIINVDAFMNIRLE--AVLYRDRRGQIANLQDLFVTGR 90
Query: 69 VVRYVQLPGDEVD 81
VRYV +P D VD
Sbjct: 91 NVRYVHIP-DHVD 102
>gi|401625663|gb|EJS43661.1| smd1p [Saccharomyces arboricola H-6]
Length = 146
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP 51
+F K L + V +ELKN ++ GTL SV +N LTD+ +T P
Sbjct: 3 LVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLP 48
>gi|348519431|ref|XP_003447234.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like isoform 1
[Oreochromis niloticus]
gi|348519433|ref|XP_003447235.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like isoform 2
[Oreochromis niloticus]
Length = 140
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+N+ + G + +VD ++NI+L D+ D+ + +++ FI G
Sbjct: 38 LLQGLQGEVTTVDLRNESTARGRVVNVDAFMNIRLEDVLYR--DRRGQLTQLQDLFITGR 95
Query: 69 VVRYVQLP 76
+RYV +P
Sbjct: 96 NIRYVHIP 103
>gi|344269970|ref|XP_003406820.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Loxodonta
africana]
Length = 133
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
Y F L + V +ELKN + GT+ VD +N L + +T ++ P + ++ I
Sbjct: 17 LYRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLETLSI 74
Query: 66 RGSVVRYVQLP 76
RG+ +RY LP
Sbjct: 75 RGNNIRYFILP 85
>gi|298709372|emb|CBJ31306.1| Small nuclear ribonucleoprotein-associated protein D1 [Ectocarpus
siliculosus]
Length = 107
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + + V VELKN ++ GT+ SVD +N L ++ VT K P + + IRG+
Sbjct: 6 FLMKMNNETVTVELKNGTTVHGTVASVDVSMNTHLKNVKVTPKGKNP--TTYDSLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+R LP + +D L+ DA +++
Sbjct: 64 NIRCYILPDNLNLDQLLIDDAPKQK 88
>gi|452001361|gb|EMD93821.1| hypothetical protein COCHEDRAFT_1154389 [Cochliobolus
heterostrophus C5]
Length = 134
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L + G ++VELK+ ++ G L + D ++N+ L ++ T D DK+ + +
Sbjct: 1 MLPLGLLTAATGHPMLVELKSGETLNGLLVNCDTWMNLTLREVVQTSADGDKF---MRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
++RGS ++Y+++P + VD
Sbjct: 58 EIYVRGSTIKYLRVPDEIVD 77
>gi|451849184|gb|EMD62488.1| hypothetical protein COCSADRAFT_221383 [Cochliobolus sativus
ND90Pr]
Length = 141
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVK 61
+L + G ++VELK+ ++ G L + D ++N+ L ++ T D DK+ + +
Sbjct: 1 MLPLGLLTAATGHPMLVELKSGETLNGLLVNCDTWMNLTLREVVQTSADGDKF---MRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
++RGS ++Y+++P + VD
Sbjct: 58 EIYVRGSTIKYLRVPDEIVD 77
>gi|170064026|ref|XP_001867355.1| small nuclear ribonucleoprotein Sm D1 [Culex quinquefasciatus]
gi|167881462|gb|EDS44845.1| small nuclear ribonucleoprotein Sm D1 [Culex quinquefasciatus]
Length = 126
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + + + IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTITGVDVAMNTHLKAVKMTIKNRDP--VQLDSLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP ++T L+ DA + A
Sbjct: 64 NIRYYILPDSLPLETLLIDDAPKTRA 89
>gi|258597219|ref|XP_001347757.2| lsm4 homologue, putative [Plasmodium falciparum 3D7]
gi|254832602|gb|AAN35670.2| lsm4 homologue, putative [Plasmodium falciparum 3D7]
Length = 126
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFI 65
+ K + V+VELKN + G L D+++N+ + +I T D DK+ + C++
Sbjct: 6 TLLKCSQNQPVMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKF---WKISECYV 62
Query: 66 RGSVVRYVQLPGDEVDTQLLQDATRK 91
RG+ ++Y+++ ++ + + A +K
Sbjct: 63 RGNSIKYIRVQDQAIEQAIEETAEQK 88
>gi|164657680|ref|XP_001729966.1| hypothetical protein MGL_2952 [Malassezia globosa CBS 7966]
gi|159103860|gb|EDP42752.1| hypothetical protein MGL_2952 [Malassezia globosa CBS 7966]
Length = 120
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN I GT+ VD +N L + +T P +S+ IRG+
Sbjct: 6 FLMKLNNESVTIELKNGTVIHGTVTGVDVQMNTHLKAVKMTVRGGEP--ISLDTLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
RY LP +DT L+ DA R +
Sbjct: 64 NTRYWILPDALPLDTLLVDDAPRPKG 89
>gi|50309757|ref|XP_454891.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|15072878|emb|CAC48005.1| hypothetical protein [Kluyveromyces lactis]
gi|49644026|emb|CAG99978.1| KLLA0E20813p [Kluyveromyces lactis]
Length = 183
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G+ + VELKN ++ GTL VD ++N+ L++++ + L + + +++GS ++YV
Sbjct: 12 GQTMHVELKNGETVEGTLSDVDNWMNLTLSNVTHVASGE---TLKLPSFYLKGSFIKYVN 68
Query: 75 LPGDEVD 81
L D +D
Sbjct: 69 LQDDIID 75
>gi|326498561|dbj|BAJ98708.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 181
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN ++ GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTMKGKNP--VTLDHISVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEAVNAT 97
+RY LP ++T L++D R ++ T
Sbjct: 64 NIRYYILPDSLNLETLLVEDTPRVKSKKPT 93
>gi|344301854|gb|EGW32159.1| hypothetical protein SPAPADRAFT_61242 [Spathaspora passalidarum
NRRL Y-27907]
Length = 117
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 9 FFKSLVGKDVVVELK-NDVSICGTLHSVDQYLNIKLTDI-----SVTDPDKYPHMLSVKN 62
F KSL+GK V+V LK N GTL S+D Y+N++L V D ++ S+
Sbjct: 12 FLKSLIGKQVIVRLKWNKTEYRGTLISIDNYMNLQLDQTYEIIYEVEDGNETKKEESIGE 71
Query: 63 CFIRGSVVRYVQ 74
FIR + V +V+
Sbjct: 72 IFIRCNNVLFVR 83
>gi|315050300|ref|XP_003174524.1| small nuclear ribonucleoprotein Sm D1 [Arthroderma gypseum CBS
118893]
gi|327303162|ref|XP_003236273.1| small nuclear ribonucleoprotein Sm D1 [Trichophyton rubrum CBS
118892]
gi|311339839|gb|EFQ99041.1| small nuclear ribonucleoprotein Sm D1 [Arthroderma gypseum CBS
118893]
gi|326461615|gb|EGD87068.1| small nuclear ribonucleoprotein Sm D1 [Trichophyton rubrum CBS
118892]
gi|326471350|gb|EGD95359.1| small nuclear ribonucleoprotein Sm D1 [Trichophyton tonsurans CBS
112818]
Length = 125
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P +S+ + IRGS
Sbjct: 6 FLMKCANETVTIELKNGTILHGTIASVSPQMNTALRTVKMTPKGRDP--ISLDSINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ D + +
Sbjct: 64 TIRYYILPDSLPLDTLLVDDQPKPK 88
>gi|296813285|ref|XP_002846980.1| small nuclear ribonucleoprotein Sm D1 [Arthroderma otae CBS
113480]
gi|238842236|gb|EEQ31898.1| small nuclear ribonucleoprotein Sm D1 [Arthroderma otae CBS
113480]
Length = 125
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P +S+ + IRGS
Sbjct: 6 FLMKCANETVTIELKNGTILHGTIASVSPQMNTALRTVKMTPKGRDP--ISLDSINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ D + +
Sbjct: 64 TIRYYILPDSLPLDTLLVDDQPKPK 88
>gi|401837374|gb|EJT41310.1| SMD1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 146
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP 51
+F K L + V +ELKN ++ GTL SV +N LTD+ +T P
Sbjct: 3 LVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLP 48
>gi|145536550|ref|XP_001453997.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145538369|ref|XP_001454890.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145543155|ref|XP_001457264.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145544094|ref|XP_001457732.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421741|emb|CAK86600.1| unnamed protein product [Paramecium tetraurelia]
gi|124422667|emb|CAK87493.1| unnamed protein product [Paramecium tetraurelia]
gi|124425079|emb|CAK89867.1| unnamed protein product [Paramecium tetraurelia]
gi|124425550|emb|CAK90335.1| unnamed protein product [Paramecium tetraurelia]
Length = 116
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V+VELKN + GT+ VD +N L+ + +T K P + + IRG+
Sbjct: 6 FLMKLKNEQVIVELKNGTVVLGTITGVDVRMNTHLSKVKLTLKGKNP--VGLDQLTIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRK 91
+RY L + ++D L+ ++ K
Sbjct: 64 NIRYFHLSENLQIDNLLVDESISK 87
>gi|294460720|gb|ADE75934.1| unknown [Picea sitchensis]
Length = 127
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 10 FKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSV 69
++LVG ++++EL+ND I G L D +N+ + D + D L + F+RGS
Sbjct: 19 IQALVGTELLLELRNDTCIRGLLDDCDDAINVIIKDSLIEDVQGVEKKLPL--IFVRGSH 76
Query: 70 VRYVQLP 76
+R++ +P
Sbjct: 77 IRFIHIP 83
>gi|401413718|ref|XP_003886306.1| hypothetical protein NCLIV_067060 [Neospora caninum Liverpool]
gi|325120726|emb|CBZ56281.1| hypothetical protein NCLIV_067060 [Neospora caninum Liverpool]
Length = 98
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
+ ++ + ++VELK+ + G L + D ++N+ L D T D + C+IRG
Sbjct: 6 TLLRAAQNRPMMVELKSGETYSGLLANCDGFMNLHLKDSVCTSKDG-ERFWKLTECYIRG 64
Query: 68 SVVRYVQLPGDEVDT 82
++V+Y++L + ++T
Sbjct: 65 NMVKYIRLQEEVLET 79
>gi|317147119|ref|XP_001821897.2| U6 snRNA-associated Sm-like protein LSm4 [Aspergillus oryzae
RIB40]
Length = 123
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVKN 62
L + G ++VELKN ++ G L + D ++N+ L ++ T P D++ +
Sbjct: 4 LPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRF---FRLPE 60
Query: 63 CFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
+IRG+ ++Y+++P E +++++ + + N R
Sbjct: 61 VYIRGNNIKYLRIP--EEIIEMVKEQPQNQPSNRNR 94
>gi|300176808|emb|CBK25377.2| unnamed protein product [Blastocystis hominis]
Length = 100
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 13 LVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRY 72
L + V +ELKN I GT+ VD +N L + +T + P +S+ + +RGS +RY
Sbjct: 3 LSNETVTIELKNGTIIVGTITGVDVAMNTHLKAVKMTIKGRNP--VSLDSMSVRGSNIRY 60
Query: 73 VQLPGD-EVDTQLLQDATRKE 92
V LP +D L+ D+ +
Sbjct: 61 VILPDSINLDAYLVDDSPKNN 81
>gi|392577177|gb|EIW70307.1| hypothetical protein TREMEDRAFT_29897 [Tremella mesenterica DSM
1558]
Length = 126
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT---DPDKYPHMLSVKNCFIRGSVVRYVQ 74
V +ELKN I GT+ SVD + L + +T P P +S+ + IRG+ +RY
Sbjct: 8 VTMELKNGTVIHGTITSVDPAMTTHLKSVKMTLRSSPPGTPP-ISLDSIAIRGNNIRYYV 66
Query: 75 LPGD-EVDTQLLQDATRKE 92
LP +DT L+ DA R +
Sbjct: 67 LPDSLPLDTLLVDDAPRAK 85
>gi|340513813|gb|EGR44094.1| predicted protein [Trichoderma reesei QM6a]
Length = 120
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN GT+ SV +N+ L + +T + L N IRGS
Sbjct: 6 FLMKCANETVTIELKNGTIAHGTISSVTPQMNVALRTVKMTARGQDSIALDTMN--IRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ DA RKEA
Sbjct: 64 TIRYFILPDSLPLDTLLIDDAPKPKNKARKEA 95
>gi|348684426|gb|EGZ24241.1| hypothetical protein PHYSODRAFT_311307 [Phytophthora sojae]
Length = 122
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
KS VG V ++LKND + G + V Q ++ L D T P+ ML F+ G
Sbjct: 23 LLKSFVGLRVRIDLKNDSVLEGVVQEVVQDMDFMLLDACETKPNGTTLMLD--EVFVMGK 80
Query: 69 VVRYVQLPGDEVDTQLLQDATRKEAVNAT 97
V YV +P +Q LQ TR +AT
Sbjct: 81 TVLYVHIPDRINISQHLQQYTRMLRQSAT 109
>gi|365983414|ref|XP_003668540.1| hypothetical protein NDAI_0B02620 [Naumovozyma dairenensis CBS
421]
gi|343767307|emb|CCD23297.1| hypothetical protein NDAI_0B02620 [Naumovozyma dairenensis CBS
421]
Length = 153
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
+F K L + V +ELKN ++ GTL +V +N LTD+ ++ P +S + I
Sbjct: 3 LVNFLKKLRNEQVTIELKNGTTVWGTLQTVSPQMNTTLTDVKLSLPRNASQGISAGSVAI 62
>gi|148691046|gb|EDL22993.1| mCG14669, isoform CRA_b [Mus musculus]
Length = 134
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
R+ F L + V +ELKN + GT+ VD +N L + +T ++ P + ++
Sbjct: 15 RMKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLET 72
Query: 63 CFIRGSVVRYVQLP 76
IRG+ +RY LP
Sbjct: 73 LSIRGNNIRYFILP 86
>gi|115383910|ref|XP_001208502.1| hypothetical protein ATEG_01137 [Aspergillus terreus NIH2624]
gi|114196194|gb|EAU37894.1| hypothetical protein ATEG_01137 [Aspergillus terreus NIH2624]
Length = 119
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L + D ++N+ L ++ T P D++ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRF---FKLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+IRG+ ++Y+++P + V+
Sbjct: 58 EVYIRGNNIKYLRIPEEIVE 77
>gi|326368279|ref|NP_001191919.1| small nuclear ribonucleoprotein Sm D1 [Acyrthosiphon pisum]
Length = 135
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN S+ GT+ VD +N L + +T ++ P + + IRG+
Sbjct: 6 FLMKLSHETVTLELKNGTSVHGTITGVDVAMNTHLKAVKMTVRNQQP--IHYETLSIRGN 63
Query: 69 VVRYVQLPGDEVDTQLLQDATRKEAVN 95
+RY LP LL D K +N
Sbjct: 64 NIRYYILPDSLTLETLLVDDAPKSRMN 90
>gi|310795553|gb|EFQ31014.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 128
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L D ++N+ L ++ T P DK+ + +
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKF---VKIP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P D +D
Sbjct: 58 EVYVKGNNIKYLRVPDDIID 77
>gi|239789454|dbj|BAH71352.1| ACYPI007411 [Acyrthosiphon pisum]
Length = 122
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN S+ GT+ VD +N L + +T ++ P + + IRG+
Sbjct: 6 FLMKLSHETVTLELKNGTSVHGTITGVDVAMNTHLKAVKMTVRNQQP--IHYETLSIRGN 63
Query: 69 VVRYVQLPGDEVDTQLLQDATRKEAVN 95
+RY LP LL D K +N
Sbjct: 64 NIRYYILPDSLTLETLLVDDAPKSRMN 90
>gi|239789452|dbj|BAH71351.1| ACYPI007411 [Acyrthosiphon pisum]
Length = 155
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN S+ GT+ VD +N L + +T ++ P + + IRG+
Sbjct: 6 FLMKLSHETVTLELKNGTSVHGTITGVDVAMNTHLKAVKMTVRNQQP--IHYETLSIRGN 63
Query: 69 VVRYVQLPGDEVDTQLLQDATRKEAVN 95
+RY LP LL D K +N
Sbjct: 64 NIRYYILPDSLTLETLLVDDAPKSRMN 90
>gi|355721054|gb|AES07137.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Mustela
putorius furo]
Length = 139
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
R+ F L + V +ELKN + GT+ VD +N L + +T ++ P + ++
Sbjct: 20 RMKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLET 77
Query: 63 CFIRGSVVRYVQLP 76
IRG+ +RY LP
Sbjct: 78 LSIRGNNIRYFILP 91
>gi|432882999|ref|XP_004074183.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like isoform 1
[Oryzias latipes]
gi|432883001|ref|XP_004074184.1| PREDICTED: U7 snRNA-associated Sm-like protein LSm10-like isoform 2
[Oryzias latipes]
Length = 134
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G+ V+L+++ S G + +VD ++NI+L D+ D+ +++ FI G
Sbjct: 32 LLQGLQGEVTTVDLRDESSARGLVLNVDAFMNIRLKDVLFL--DRRGQTAQLQDLFITGR 89
Query: 69 VVRYVQLPGDEVD 81
VRYV +P D VD
Sbjct: 90 NVRYVHIP-DHVD 101
>gi|363753270|ref|XP_003646851.1| hypothetical protein Ecym_5270 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890487|gb|AET40034.1| hypothetical protein Ecym_5270 [Eremothecium cymbalariae
DBVPG#7215]
Length = 142
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN ++ GTL +V +N LT++ ++ P K SV + ++ G+
Sbjct: 6 FLMKLRNEQVTIELKNGTTVWGTLQTVSPQMNATLTEVRLSLPSKTSKA-SVASVYLTGA 64
Query: 69 V------------VRYVQLPGDEVDTQLLQDA 88
V ++Y+ + G+ + +L D+
Sbjct: 65 VPQIGEGDRSTTSLQYINIRGNTIRQIILPDS 96
>gi|167392342|ref|XP_001740112.1| small nuclear ribonucleoprotein sm D1 [Entamoeba dispar SAW760]
gi|165895904|gb|EDR23487.1| small nuclear ribonucleoprotein sm D1, putative [Entamoeba dispar
SAW760]
Length = 100
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPG 77
V +ELK+ + + GT+ VD Y+N+ L + +T K P + + +RG+ +R + LP
Sbjct: 8 VTIELKSGMILTGTIVGVDNYMNVHLKVVKMTQKGKNP--IDLDQSTVRGNTIRNIILPE 65
Query: 78 D-EVDTQLLQDATR 90
+DT L+ D R
Sbjct: 66 SLNLDTYLVDDTPR 79
>gi|302692404|ref|XP_003035881.1| hypothetical protein SCHCODRAFT_74336 [Schizophyllum commune
H4-8]
gi|300109577|gb|EFJ00979.1| hypothetical protein SCHCODRAFT_74336 [Schizophyllum commune
H4-8]
Length = 121
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P L + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGSVVHGTITGVDMQMNTHLKTVKMTTRNRDPTHLD--SLSLRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP +DT L+ DA + +
Sbjct: 64 TIRYFILPDALPLDTLLVDDAPKPKG 89
>gi|357149831|ref|XP_003575247.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like
[Brachypodium distachyon]
Length = 114
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN ++ GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++ R
Sbjct: 64 NIRYYILPDSLNLETLLIEETPR 86
>gi|83769760|dbj|BAE59895.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 133
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVKNCFIRGSVVRY 72
G ++VELKN ++ G L + D ++N+ L ++ T P D++ + +IRG+ ++Y
Sbjct: 24 GHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRF---FRLPEVYIRGNNIKY 80
Query: 73 VQLPGDEVDTQLLQDATRKEAVNATR 98
+++P E +++++ + + N R
Sbjct: 81 LRIP--EEIIEMVKEQPQNQPSNRNR 104
>gi|440804582|gb|ELR25459.1| small nuclear ribonucleoprotein Sm D1, putative [Acanthamoeba
castellanii str. Neff]
Length = 125
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ IRG+
Sbjct: 6 FLMKLSNETVTIELKNGTIVHGTITGVDISMNTHLKAVKLTLKGKNP--INLDTLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ D R +
Sbjct: 64 NIRYYLLPDTLNLDTLLVDDTPRPK 88
>gi|407917344|gb|EKG10658.1| hypothetical protein MPH_12237 [Macrophomina phaseolina MS6]
Length = 122
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T ++ L N IRGS
Sbjct: 6 FLMKCQNETVTIELKNGTVVNGTIASVSPTMNTALRTVKMTPKNRETMTLDTIN--IRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ DA + +
Sbjct: 64 NIRYYILPDSLPLDTLLIDDAPKPK 88
>gi|334329130|ref|XP_003341185.1| PREDICTED: u7 snRNA-associated Sm-like protein LSm10-like
[Monodelphis domestica]
Length = 123
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G V+L+++ G + +VD ++NI+L +++ T D+ + + + F+ G
Sbjct: 20 LLQGLRGLVTTVDLRDETVARGRVDNVDAFMNIRLAEVTYT--DRQGQQVQLDDLFVTGR 77
Query: 69 VVRYVQLPGDEVD 81
VRYV +P D+VD
Sbjct: 78 NVRYVHIP-DDVD 89
>gi|50291695|ref|XP_448280.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527592|emb|CAG61241.1| unnamed protein product [Candida glabrata]
Length = 151
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP 51
L +F K L + V +ELKN ++ GTL SV +N+ +TD+ ++ P
Sbjct: 3 LLVNFLKKLKNEQVTLELKNGTTVWGTLQSVSSQMNVTVTDVVLSLP 49
>gi|159486837|ref|XP_001701443.1| small nuclear ribonucleoprotein Sm D1 [Chlamydomonas reinhardtii]
gi|158271625|gb|EDO97440.1| small nuclear ribonucleoprotein Sm D1 [Chlamydomonas reinhardtii]
Length = 114
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN I GT+ VD +N L + +T K P +S+ + +RG+
Sbjct: 2 FLMKLANETVQIELKNGTVIQGTIAGVDIAMNTHLKAVKLTARGKNP--VSMDHLSVRGN 59
Query: 69 VVRYVQLPGD-EVDTQLLQ-DATRKEAVNATR 98
+RY LP +DT L+ D ++ TR
Sbjct: 60 NIRYYILPDSLNLDTLLVDIDKPKQRPTKPTR 91
>gi|367013560|ref|XP_003681280.1| hypothetical protein TDEL_0D04850 [Torulaspora delbrueckii]
gi|359748940|emb|CCE92069.1| hypothetical protein TDEL_0D04850 [Torulaspora delbrueckii]
Length = 150
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP 51
F K L + V VELKN ++ GTL +V +N+ LTD+ ++ P
Sbjct: 6 FLKKLRNEQVTVELKNGTTVWGTLQTVSPQMNVTLTDVQLSLP 48
>gi|401884158|gb|EJT48330.1| hypothetical protein A1Q1_02613 [Trichosporon asahii var. asahii
CBS 2479]
Length = 264
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVK--NCFIR 66
F L + V +ELKN I GT+ SVD +N L + ++ + P+ S + IR
Sbjct: 148 FLMKLNNETVTIELKNGSVIHGTITSVDPQMNTHLKSVKMSLRNAAPNTPSTHLDSIAIR 207
Query: 67 GSVVRYVQLPGD-EVDTQLLQDATR 90
G+ +RY LP +DT L+ D+ +
Sbjct: 208 GNNIRYFILPDSLPLDTLLVDDSPK 232
>gi|72005990|ref|XP_785584.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like
[Strongylocentrotus purpuratus]
Length = 132
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ L ++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKSVKLTPKNRETQQL--ESLSIRGN 63
Query: 69 VVRYVQLPGDEVDTQLLQDATRK 91
+RY LP QLL D T K
Sbjct: 64 NIRYYILPDSLPLDQLLVDDTPK 86
>gi|387019547|gb|AFJ51891.1| U7 snRNP-specific Sm-like protein LSM10 [Crotalus adamanteus]
Length = 125
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L + VEL+++ G + +VD ++N++L + + T D++ +++ FI G
Sbjct: 20 LLQGLHSRVTTVELRDESVAVGRIVNVDAFMNVRLGEATFT--DRHGCACRLQDLFITGR 77
Query: 69 VVRYVQLPGDEVD 81
VRYV +P DEVD
Sbjct: 78 NVRYVHIP-DEVD 89
>gi|321455706|gb|EFX66832.1| hypothetical protein DAPPUDRAFT_302421 [Daphnia pulex]
Length = 125
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V++ELKN + GT+ VD +N L + +T ++ P + ++ IRG+
Sbjct: 6 FLMKLSHETVIIELKNGTQVHGTITGVDVAMNTHLKAVKMTVKNRDP--VQLETLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA 88
+RY LP ++T LL D+
Sbjct: 64 NIRYYILPDSLPLETLLLDDS 84
>gi|296812049|ref|XP_002846362.1| small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238841618|gb|EEQ31280.1| small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 126
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
L + G ++VELKN ++ G L + D ++N+ L ++ T P+ + +
Sbjct: 8 LPLGLLNAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTSPEG-DRFFRLPEVY 66
Query: 65 IRGSVVRYVQLPGDEVD 81
+RG+ ++Y+++P + VD
Sbjct: 67 VRGNNIKYLRVPEEVVD 83
>gi|145232181|ref|XP_001399544.1| U6 snRNA-associated Sm-like protein LSm4 [Aspergillus niger CBS
513.88]
gi|134056455|emb|CAL00622.1| unnamed protein product [Aspergillus niger]
Length = 121
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEG-DRFFRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKE 92
++RG+ ++Y+++P + ++ Q A + +
Sbjct: 60 YVRGNNIKYLRIPEEIIEMVKEQQANQSQ 88
>gi|259479587|tpe|CBF69945.1| TPA: U6 snRNA-associated Sm-like protein LSM4, putative
(AFU_orthologue; AFUA_2G12020) [Aspergillus nidulans
FGSC A4]
Length = 119
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILREVVQTSPEG-DRFFKLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVD 81
++RG+ ++Y+++P + +D
Sbjct: 60 YVRGNNIKYLRIPEEIID 77
>gi|195382665|ref|XP_002050050.1| GJ20404 [Drosophila virilis]
gi|194144847|gb|EDW61243.1| GJ20404 [Drosophila virilis]
Length = 147
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 13 LVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRY 72
L G+ V+++L+N+ S+ G + D ++ +LTD D + H + + IR ++R
Sbjct: 23 LQGRAVLIDLRNETSVAGIISIADGHMTCELTDAVFIDRNGQYH--AFDHFMIRNRMIRL 80
Query: 73 VQLP-----GDEVDTQLLQDATRKEAVNATR 98
+ LP G E+ QL + R+ NA R
Sbjct: 81 LHLPPDLDIGHEL-AQLHRKPARRAKTNAKR 110
>gi|449273124|gb|EMC82732.1| U7 snRNA-associated Sm-like protein LSm10 [Columba livia]
Length = 123
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G V+L+++ + G + +VD ++N++L +++ T D+ + + F+ G
Sbjct: 20 LLQGLRGLVTTVDLRDESTATGRVTNVDAFMNVRLAEVTYT--DRQGAVSHLDELFVTGR 77
Query: 69 VVRYVQLPGDEVD 81
VRYV +P DEVD
Sbjct: 78 NVRYVHIP-DEVD 89
>gi|221125651|ref|XP_002163302.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Hydra
magnipapillata]
Length = 128
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V VELKN GT+ VD +N L + +T K P + ++ IRG+
Sbjct: 6 FLMKLSHETVTVELKNGTVAHGTITGVDMSMNTHLKAVKMTLKGKDP--VQLETLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP +DT L+ D + +A
Sbjct: 64 NIRYFILPESLPLDTLLVDDEPKSKA 89
>gi|225684632|gb|EEH22916.1| U6 snRNP-associated protein Lsm4 [Paracoccidioides brasiliensis
Pb03]
gi|226286829|gb|EEH42342.1| small nuclear ribonucleoprotein [Paracoccidioides brasiliensis
Pb18]
Length = 124
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLILKEVVQTTPEG-DRFFRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRKEAVNATR 98
++RG+ ++Y+++P + VD + +D + + N R
Sbjct: 60 YVRGNNIKYLRVPEEIVD--IAKDQQQNQPSNRGR 92
>gi|390599258|gb|EIN08655.1| Sm-like ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 144
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + ++ ++ P +S+ IRG+
Sbjct: 30 FLMKLNNESVTIELKNGSVVHGTITGVDMQMNTHLKTVKMSMRNREP--VSLDTLSIRGN 87
Query: 69 VVRYVQLP-GDEVDTQLLQDA 88
+RY LP +DT L+ DA
Sbjct: 88 NIRYFVLPDALPLDTLLVDDA 108
>gi|302881905|ref|XP_003039863.1| hypothetical protein NECHADRAFT_85726 [Nectria haematococca mpVI
77-13-4]
gi|256720730|gb|EEU34150.1| hypothetical protein NECHADRAFT_85726 [Nectria haematococca mpVI
77-13-4]
Length = 125
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L S D ++N+ L ++ T P DK+ + V
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLREVVQTSPEGDKFVRLPEV- 59
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P + +D
Sbjct: 60 --YVKGNNIKYLRVPDEIID 77
>gi|307106683|gb|EFN54928.1| hypothetical protein CHLNCDRAFT_14874, partial [Chlorella
variabilis]
Length = 82
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F ++L G+ VVVEL+ D I G L + D LN++L + S S + +++G
Sbjct: 6 FVQALEGQRVVVELRYDSIIRGQLLAADDQLNLQLGEASYQALQG--ERRSCEFLYVKGR 63
Query: 69 VVRYVQLPGD 78
+R++ LPG+
Sbjct: 64 HIRFIHLPGN 73
>gi|410910972|ref|XP_003968964.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Takifugu
rubripes]
Length = 119
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P L ++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTPKNREPTQL--ESLSIRGN 63
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 64 NIRYFILP 71
>gi|357623693|gb|EHJ74743.1| small nuclear ribonucleoprotein Sm D1 [Danaus plexippus]
Length = 125
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + VT +K L ++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNKEE--LQLETLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP ++T L+ DA + +
Sbjct: 64 NIRYFLLPDSLPLETLLIDDAPKGKG 89
>gi|195435704|ref|XP_002065819.1| GK18761 [Drosophila willistoni]
gi|194161904|gb|EDW76805.1| GK18761 [Drosophila willistoni]
Length = 124
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN I GT+ VD +N L + +T ++ P + +++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIRNRDP--VHLESLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
VRY LP ++T L+ D + +
Sbjct: 64 NVRYFILPDSLPLETLLIDDTPKSKT 89
>gi|408393268|gb|EKJ72533.1| hypothetical protein FPSE_07170 [Fusarium pseudograminearum
CS3096]
Length = 139
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
LL + G ++VELKN ++ G L S D ++N+ L ++ T P+ + +
Sbjct: 16 LLPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEG-DRFVRLPEV 74
Query: 64 FIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P + +D
Sbjct: 75 YVKGNNIKYLRVPDEIID 92
>gi|85107173|ref|XP_962325.1| hypothetical protein NCU07683 [Neurospora crassa OR74A]
gi|28923928|gb|EAA33089.1| hypothetical protein NCU07683 [Neurospora crassa OR74A]
Length = 130
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L D ++N+ L ++ T P DK+ + +
Sbjct: 1 MLPLGILTAAQGHPMLVELKNGETLNGHLIQCDTWMNLTLREVVQTSPEGDKF---VRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P D +D
Sbjct: 58 EVYVKGNNIKYLRVPDDVID 77
>gi|403222920|dbj|BAM41051.1| U6 snRNA-associated sm-like protein lsm4 [Theileria orientalis
strain Shintoku]
Length = 120
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPG 77
V++ELKN + G L S D ++N+ + ++ T + + CFIRG+ V+ ++LP
Sbjct: 2 VLIELKNGETYSGILDSCDSFMNMHMVNVVCTSKNGT-EFWKLNECFIRGNNVKSLRLPN 60
Query: 78 D 78
+
Sbjct: 61 E 61
>gi|50306519|ref|XP_453233.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642367|emb|CAH00329.1| KLLA0D03773p [Kluyveromyces lactis]
Length = 141
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 20/91 (21%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHM-------- 57
F K L + V +ELKN ++ G + SV +N+ LTD+ +T P K
Sbjct: 3 LTGFLKKLKNERVSIELKNGTTVWGIVRSVSPQMNVSLTDVRLTLPTKTSEATLAAVLLS 62
Query: 58 ------------LSVKNCFIRGSVVRYVQLP 76
S++ IRG+ +R + LP
Sbjct: 63 GGSTQGQESKRTTSLEFINIRGNTIRQIILP 93
>gi|440638708|gb|ELR08627.1| hypothetical protein GMDG_03318 [Geomyces destructans 20631-21]
Length = 124
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L S D ++N+ L ++ T P DK+ + V
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEGDKFFRLAEV- 59
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P + +D
Sbjct: 60 --YVKGNNIKYLRVPDEIID 77
>gi|320590330|gb|EFX02773.1| bar domain containing protein [Grosmannia clavigera kw1407]
Length = 1158
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
++L + G ++VELKN ++ G L D ++N+ L + T PD M +
Sbjct: 364 KMLPLGLLSAAQGHPMLVELKNGETLNGHLVQCDTWMNLTLKGVVQTSPDGDSFM-RIPE 422
Query: 63 CFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P + +D
Sbjct: 423 VYVKGNNIKYLRVPDEIID 441
>gi|331241854|ref|XP_003333574.1| small nuclear ribonucleoprotein D1 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309312564|gb|EFP89155.1| small nuclear ribonucleoprotein D1 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 122
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + + + IRGS
Sbjct: 6 FLMKLNQETVTIELKNGTVVHGTISGVDVAMNTHLKAVKMTVRNREP--VQLDSLSIRGS 63
Query: 69 VVRYVQLP 76
VRY+ LP
Sbjct: 64 NVRYIILP 71
>gi|298714232|emb|CBJ27368.1| Putaive LSm10 protein [Ectocarpus siliculosus]
Length = 147
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 24/95 (25%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYL---------------------NIKLTDIS 47
+S+ G +VVE+KND I G L D+ + ++ + D+
Sbjct: 26 LIQSMRGNKIVVEMKNDAEISGILEETDRNMKAATVWLAAYGLTCSRAGPAPSLSMVDVR 85
Query: 48 VTDPDKYPHMLSVKNCFIRGSVVRYVQLPGDEVDT 82
T+PD + V ++G ++RYV +P D+VD
Sbjct: 86 QTNPDGSVRKMDV--VLVQGKMIRYVHIP-DKVDA 117
>gi|154311062|ref|XP_001554861.1| hypothetical protein BC1G_06649 [Botryotinia fuckeliana B05.10]
Length = 690
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVKNCFIRGSVVRY 72
G ++VELK+ ++ G L S D ++N+ L ++ T P DK+ + + +++G+ ++Y
Sbjct: 13 GHPMLVELKDGETLNGHLVSCDTWMNLTLKEVVQTSPDGDKFTRLPEI---YVKGNNIKY 69
Query: 73 VQLPGDEVDTQLLQDATRKEAVN 95
+++P + +D L++D + + N
Sbjct: 70 LRMPDEIID--LVKDQQQGQQSN 90
>gi|449269384|gb|EMC80160.1| Small nuclear ribonucleoprotein Sm D1, partial [Columba livia]
Length = 117
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
+ F L + V +ELKN + GT+ VD +N L + +T ++ P + ++ I
Sbjct: 1 IFRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLETLSI 58
Query: 66 RGSVVRYVQLP 76
RG+ +RY LP
Sbjct: 59 RGNNIRYFILP 69
>gi|388516873|gb|AFK46498.1| unknown [Lotus japonicus]
Length = 115
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKAVKLTLKGKNP--VTLDHLSVRGT 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++A R
Sbjct: 64 NIRYYILPDSLNLETLLVEEAPR 86
>gi|260819208|ref|XP_002604929.1| hypothetical protein BRAFLDRAFT_264344 [Branchiostoma floridae]
gi|229290258|gb|EEN60939.1| hypothetical protein BRAFLDRAFT_264344 [Branchiostoma floridae]
Length = 121
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V VELKN + GT+ VD +N L + +T ++ P + + + IRG+
Sbjct: 6 FLMKLSHETVTVELKNGTQVHGTITGVDVSMNTHLKAVKMTIKNREP--VQLDSLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA 88
+RY LP +DT L+ D
Sbjct: 64 NIRYFILPDSLPLDTLLIDDT 84
>gi|195126373|ref|XP_002007645.1| GI12268 [Drosophila mojavensis]
gi|193919254|gb|EDW18121.1| GI12268 [Drosophila mojavensis]
Length = 124
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V VELKN I GT+ VD +N L + +T ++ P + +++ IRG+
Sbjct: 6 FLMKLSHETVTVELKNGTQIHGTITGVDVAMNTHLKSVKMTIKNRDP--VHLESLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA 88
+RY LP ++T L+ D
Sbjct: 64 NIRYFILPDSLPLETLLIDDT 84
>gi|303277487|ref|XP_003058037.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460694|gb|EEH57988.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 116
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + L + +ELKN + GT+ VD +N L ++ +T K P +S+ + +RG+
Sbjct: 6 FLQKLSHETCTIELKNGTVVHGTIMGVDISMNTHLKNVKMTLKGKNP--VSMDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP +DT L+ D +
Sbjct: 64 NIRYYILPDSLNLDTLLVDDTPK 86
>gi|198464926|ref|XP_001353417.2| GA10544 [Drosophila pseudoobscura pseudoobscura]
gi|198149939|gb|EAL30924.2| GA10544 [Drosophila pseudoobscura pseudoobscura]
Length = 125
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN I GT+ VD +N L + +T ++ P + +++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDP--VHLESLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP ++T L+ D + +
Sbjct: 64 NIRYFILPDSLPLETLLIDDTPKSKT 89
>gi|195019728|ref|XP_001985042.1| GH14721 [Drosophila grimshawi]
gi|193898524|gb|EDV97390.1| GH14721 [Drosophila grimshawi]
Length = 124
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V VELKN I GT+ VD +N L + +T ++ P + +++ IRG+
Sbjct: 6 FLMKLSHETVTVELKNGTQIHGTITGVDVAMNTHLKSVKMTIKNRDP--VHLESLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA 88
+RY LP ++T L+ D
Sbjct: 64 NIRYFILPDSLPLETLLIDDT 84
>gi|388583911|gb|EIM24212.1| Sm-like ribonucleo protein [Wallemia sebi CBS 633.66]
Length = 126
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + K ++VELK+ + G L + D Y+N+ L + T+ D + C
Sbjct: 1 MLPLTLLNGAQNKPLLVELKSGETFNGHLIACDNYMNLTLKQVFQTNADG-ERFWKLPEC 59
Query: 64 FIRGSVVRYVQLPGDEVDT-QLLQDATRKEAVN 95
++RG+ ++Y+++ + +D + QD R++ N
Sbjct: 60 YLRGNTIKYIRVADELLDQIKTTQDRDREQYKN 92
>gi|312086540|ref|XP_003145116.1| hypothetical protein LOAG_09541 [Loa loa]
Length = 120
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQL 75
++VELK+ + G L + D ++NI L D T D D++ M V ++RGS ++Y+++
Sbjct: 1 MLVELKSGETYNGHLVACDAWMNIHLRDAICTSRDGDRFLKMQEV---YVRGSTIKYLRI 57
Query: 76 PGDEVD 81
P D V+
Sbjct: 58 PDDVVE 63
>gi|168034120|ref|XP_001769561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679103|gb|EDQ65554.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 114
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N + + +T K P +++ + IRG+
Sbjct: 6 FLMKLNNETVSIELKNGTIVHGTITGVDISMNTHMKSVKLTLKGKVP--VALDHLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP +DT L+ D R
Sbjct: 64 NIRYYILPDSLNLDTLLVDDTPR 86
>gi|71027801|ref|XP_763544.1| U6 snRNA-associated protein [Theileria parva strain Muguga]
gi|68350497|gb|EAN31261.1| U6 snRNA-associated protein, putative [Theileria parva]
Length = 141
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 16 KDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQL 75
+ ++ELKN + G L S D ++N+ + ++ T + CFIRG+ V+ ++L
Sbjct: 14 QPTLIELKNGETYSGILDSCDAFMNMHMVNVVCTSKSG-TDFWKLDECFIRGNTVKSLRL 72
Query: 76 PGDEVDTQLLQDATRKEAVN 95
P + + + RK N
Sbjct: 73 PNEVAEIAKEEKRPRKTRKN 92
>gi|32959908|emb|CAE11897.1| small nuclear ribonucleoprotein Sm D1 [Homo sapiens]
Length = 119
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V++ELKN + GT+ VD +N L + +T ++ P + ++ IRG+
Sbjct: 6 FLMKLSHETVIIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLETLSIRGN 63
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 64 NIRYFILP 71
>gi|119481265|ref|XP_001260661.1| small nuclear ribonucleoprotein [Neosartorya fischeri NRRL 181]
gi|146322938|ref|XP_755534.2| U6 snRNA-associated Sm-like protein LSM4 [Aspergillus fumigatus
Af293]
gi|119408815|gb|EAW18764.1| small nuclear ribonucleoprotein [Neosartorya fischeri NRRL 181]
gi|129558535|gb|EAL93496.2| U6 snRNA-associated Sm-like protein LSM4, putative [Aspergillus
fumigatus Af293]
Length = 119
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L + D ++N+ L ++ T P D++ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRF---FRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
++RG+ ++Y+++P + V+
Sbjct: 58 EVYVRGNNIKYLRIPEEIVE 77
>gi|425777993|gb|EKV16140.1| Small nuclear ribonucleoprotein SmD1, putative [Penicillium
digitatum Pd1]
gi|425780629|gb|EKV18635.1| Small nuclear ribonucleoprotein SmD1, putative [Penicillium
digitatum PHI26]
Length = 125
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V VELKN + GT+ SV +N L + +T K +S+ IRGS
Sbjct: 6 FLMKCANETVTVELKNGTILHGTIVSVSPQMNTSLRAVKMT--PKGRDTISLDTINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ DA + +
Sbjct: 64 TIRYYILPDSLPLDTLLVDDAPKPK 88
>gi|403412301|emb|CCL99001.1| predicted protein [Fibroporia radiculosa]
Length = 743
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P S+ + IRG+
Sbjct: 6 FLMKLNNETVTIELKNGSVVHGTITGVDMQMNTHLKTVKMTARNREP--TSLDSLSIRGN 63
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 64 NIRYFVLP 71
>gi|168013855|ref|XP_001759481.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689411|gb|EDQ75783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 114
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKSVKLTLKGKVP--VALDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP +DT L+ D R
Sbjct: 64 NIRYYILPDSLNLDTLLVDDTPR 86
>gi|367022520|ref|XP_003660545.1| hypothetical protein MYCTH_2298987 [Myceliophthora thermophila
ATCC 42464]
gi|347007812|gb|AEO55300.1| hypothetical protein MYCTH_2298987 [Myceliophthora thermophila
ATCC 42464]
Length = 128
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L D ++N+ L ++ T P DK+ + +
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVQCDTWMNLTLREVVQTSPEGDKF---MRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P + +D
Sbjct: 58 EVYVKGNNIKYLRVPDEIID 77
>gi|68473251|ref|XP_719431.1| hypothetical protein CaO19.7673 [Candida albicans SC5314]
gi|46441248|gb|EAL00547.1| hypothetical protein CaO19.7673 [Candida albicans SC5314]
gi|238880442|gb|EEQ44080.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 116
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
M+ + F + + + VELKN I GTL S + +N+ L ++ + P + P +L
Sbjct: 1 MKLVRFLMNIPNSTNQPITVELKNGNIISGTLLSCNPSMNLHLKNVRLQQPLQDPILLQY 60
Query: 61 KNCFIRGSVVRYVQLPGDEVDTQ 83
N IRG+ VR + LP DE++ +
Sbjct: 61 IN--IRGNQVRQILLP-DELNIE 80
>gi|340517649|gb|EGR47892.1| predicted protein [Trichoderma reesei QM6a]
Length = 152
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L D ++N+ L ++ T P DK+ + +
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKF---MRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P + +D
Sbjct: 58 EVYVKGNNIKYLRVPDEIID 77
>gi|17864386|ref|NP_524774.1| small ribonucleoprotein particle protein SmD1 [Drosophila
melanogaster]
gi|194747611|ref|XP_001956245.1| GF25112 [Drosophila ananassae]
gi|195327205|ref|XP_002030312.1| GM24635 [Drosophila sechellia]
gi|195493908|ref|XP_002094615.1| GE20102 [Drosophila yakuba]
gi|195589894|ref|XP_002084684.1| GD12704 [Drosophila simulans]
gi|33112453|sp|Q9VU02.1|SMD1_DROME RecName: Full=Probable small nuclear ribonucleoprotein Sm D1;
Short=Sm-D1; AltName: Full=snRNP core protein D1
gi|7294552|gb|AAF49893.1| small ribonucleoprotein particle protein SmD1 [Drosophila
melanogaster]
gi|189181777|gb|ACD81665.1| FI02845p [Drosophila melanogaster]
gi|190623527|gb|EDV39051.1| GF25112 [Drosophila ananassae]
gi|194119255|gb|EDW41298.1| GM24635 [Drosophila sechellia]
gi|194180716|gb|EDW94327.1| GE20102 [Drosophila yakuba]
gi|194196693|gb|EDX10269.1| GD12704 [Drosophila simulans]
Length = 124
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN I GT+ VD +N L + +T ++ P + ++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDP--VHLETLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP ++T L+ D + +
Sbjct: 64 NIRYFILPDSLPLETLLIDDTPKSKT 89
>gi|407920870|gb|EKG14049.1| Protein-tyrosine phosphatase receptor/non-receptor type
[Macrophomina phaseolina MS6]
Length = 1134
Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPG 77
++VELKN ++ G L + D ++N+ L ++ T PD + +IRG+ ++Y+++P
Sbjct: 1 MLVELKNGETLNGHLVNCDNWMNLTLKEVVQTSPDG-DRFWRLPEVYIRGNNIKYLRVPD 59
Query: 78 DEVD 81
+ +D
Sbjct: 60 EIID 63
>gi|194870009|ref|XP_001972567.1| GG13810 [Drosophila erecta]
gi|190654350|gb|EDV51593.1| GG13810 [Drosophila erecta]
Length = 124
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN I GT+ VD +N L + +T ++ P + ++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDP--VHLETLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP ++T L+ D + +
Sbjct: 64 NIRYFILPDSLPLETLLIDDTPKSKT 89
>gi|366997735|ref|XP_003683604.1| hypothetical protein TPHA_0A00850 [Tetrapisispora phaffii CBS
4417]
gi|357521899|emb|CCE61170.1| hypothetical protein TPHA_0A00850 [Tetrapisispora phaffii CBS
4417]
Length = 156
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP 51
+F K L + V +ELKN ++ GTL SV +N LTD+ ++ P
Sbjct: 7 LVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNATLTDVKLSLP 52
>gi|443713219|gb|ELU06184.1| hypothetical protein CAPTEDRAFT_162674 [Capitella teleta]
Length = 126
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + + IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTMVHGTITGVDVSMNTHLKSVKMTIKNRDP--IQLDTLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ D + +
Sbjct: 64 NIRYYLLPDSLPLDTLLIDDTPKSK 88
>gi|357440765|ref|XP_003590660.1| Small nuclear ribonucleoprotein Sm D1 [Medicago truncatula]
gi|355479708|gb|AES60911.1| Small nuclear ribonucleoprotein Sm D1 [Medicago truncatula]
Length = 114
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++A R
Sbjct: 64 NIRYYILPDSLNLETLLVEEAPR 86
>gi|350634474|gb|EHA22836.1| hypothetical protein ASPNIDRAFT_127789 [Aspergillus niger ATCC
1015]
Length = 118
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G ++VELKN ++ G L + D ++N+ L ++ T P+ + ++RG+ ++Y++
Sbjct: 12 GHPMLVELKNGETLNGHLANCDNWMNLILKEVVQTSPEG-DRFFRLPEVYVRGNNIKYLR 70
Query: 75 LPGDEVDTQLLQDATRKE 92
+P + ++ Q A + +
Sbjct: 71 IPEEIIEMVKEQQANQSQ 88
>gi|255722764|ref|XP_002546316.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240130833|gb|EER30395.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 129
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
M+ + F + + V VELKN I GT+ S + +N+ L ++ + P + P +L
Sbjct: 1 MKLVRFLMNIPNSTNQPVTVELKNGNVISGTMLSCNPSMNLNLKNVKLQQPLQDPILLDF 60
Query: 61 KNCFIRGSVVRYVQLPGDEVDTQ 83
N IRG+ VR + LP DE++ +
Sbjct: 61 IN--IRGNQVRQIILP-DELNIE 80
>gi|402589502|gb|EJW83434.1| Sm protein [Wuchereria bancrofti]
Length = 137
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
++ F L K V +ELKN + G + SVD +N L +++T + P +S+
Sbjct: 1 MMLMRFLMRLHDKFVTIELKNGTVVMGYVSSVDLAMNFHLNRVAMTLKSEKP--VSMDAV 58
Query: 64 FIRGSVVRYVQLP 76
IRG+ +RYV P
Sbjct: 59 SIRGNNIRYVIFP 71
>gi|385305583|gb|EIF49545.1| small nuclear ribonucleoprotein [Dekkera bruxellensis AWRI1499]
Length = 109
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 19 VVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPGD 78
+VELK ++ GTL + D ++NI + DI V+D + +K+ +++G ++Y+ + D
Sbjct: 1 MVELKRGETLNGTLTNCDSWMNITMKDIVVSDAHG-ENFYKLKSTYVKGIHIKYITMSND 59
Query: 79 EVD 81
+D
Sbjct: 60 LID 62
>gi|388508844|gb|AFK42488.1| unknown [Medicago truncatula]
Length = 115
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++A R
Sbjct: 64 NIRYYILPDSLNLETLLVEEAPR 86
>gi|241959636|ref|XP_002422537.1| small nuclear ribonucleoprotein, putative [Candida dubliniensis
CD36]
gi|223645882|emb|CAX40545.1| small nuclear ribonucleoprotein, putative [Candida dubliniensis
CD36]
Length = 126
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
M+ + F + + + VELKN I GTL S + +N+ L ++ + P + P +L
Sbjct: 1 MKLVRFLMNIPNSTTQPITVELKNGNIISGTLLSCNPPMNLNLKNVKLQQPLQDPILLQY 60
Query: 61 KNCFIRGSVVRYVQLPGDEVDTQ 83
N IRG+ VR + LP DE++ +
Sbjct: 61 IN--IRGNQVRQILLP-DELNIE 80
>gi|195122570|ref|XP_002005784.1| GI20655 [Drosophila mojavensis]
gi|193910852|gb|EDW09719.1| GI20655 [Drosophila mojavensis]
Length = 140
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 13 LVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRY 72
L G+ V+++L+N+ S+ G + D ++ +LTD D + H N IR ++R
Sbjct: 23 LQGRAVLIDLRNETSVAGIISIADGHMTCELTDAVFIDRNGKCHAFD--NFLIRNRMIRL 80
Query: 73 VQLPGD-EVDTQLLQDATRKEAVNATR 98
+ +P D ++ +L Q R N T+
Sbjct: 81 LHVPADLDIKHELSQLQRRPANRNKTK 107
>gi|323455004|gb|EGB10873.1| hypothetical protein AURANDRAFT_22657 [Aureococcus
anophagefferens]
Length = 114
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + S+T K + + +RGS
Sbjct: 6 FLMKLNNETVTIELKNGTVVQGTISGVDISMNTFLKNASLTPKGK--NGVKYDTLSVRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRK--EAVNATR 98
VRY LP +DT L+ D ++ +A A R
Sbjct: 64 NVRYYILPDSLNLDTLLIDDTPKQKVKAAGAAR 96
>gi|294463522|gb|ADE77290.1| unknown [Picea sitchensis]
Length = 114
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKIP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L++D R
Sbjct: 64 NIRYYILPDSLNLETLLVEDTPR 86
>gi|254578266|ref|XP_002495119.1| ZYRO0B03762p [Zygosaccharomyces rouxii]
gi|238938009|emb|CAR26186.1| ZYRO0B03762p [Zygosaccharomyces rouxii]
Length = 173
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTD---------PDKYPHMLSVKNCFI 65
G+ + +ELKN + G L +VD ++N+ L++ S D P K ++ K +I
Sbjct: 12 GQQMSIELKNGEIVEGELINVDNWMNVTLSNASQFDNIGTTVSVGPSK--EVVKAKEVYI 69
Query: 66 RGSVVRYVQLPGDEVDTQLLQ 86
RG+ ++Y++L DE+ Q+ Q
Sbjct: 70 RGTYIKYIRLQ-DEIIDQVKQ 89
>gi|326511932|dbj|BAJ95947.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 114
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN ++ GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVTIELKNGTTVHGTIIGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++ R
Sbjct: 64 NIRYYILPDSLNLETLLVEETPR 86
>gi|380477058|emb|CCF44358.1| small nuclear ribonucleoprotein [Colletotrichum higginsianum]
Length = 170
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVKN 62
L + G ++VELKN ++ G L D ++N+ L ++ T P DK+ + +
Sbjct: 41 LPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKF---VKIPE 97
Query: 63 CFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P D +D
Sbjct: 98 VYVKGNNIKYLRVPDDIID 116
>gi|84999278|ref|XP_954360.1| small nuclear ribonucleoprotein f [Theileria annulata]
gi|65305358|emb|CAI73683.1| small nuclear ribonucleoprotein f, putative [Theileria annulata]
Length = 91
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTD 45
F SL GK VVV+LK + GTL S D Y+N++L+D
Sbjct: 19 FLTSLAGKTVVVKLKWGMEYKGTLKSFDSYMNLQLSD 55
>gi|358394136|gb|EHK43537.1| hypothetical protein TRIATDRAFT_266952 [Trichoderma atroviride
IMI 206040]
Length = 130
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L D ++N+ L ++ T P DK+ + +
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKF---MRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P + +D
Sbjct: 58 EVYVKGNNIKYLRVPDEIID 77
>gi|405119017|gb|AFR93790.1| glycine rich protein [Cryptococcus neoformans var. grubii H99]
Length = 133
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 18 VVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLP 76
++VELKN V+ G L D ++N+ L ++ T D +K FI+G++++Y ++
Sbjct: 1 MLVELKNGVTFNGHLVECDTFMNVTLREVYQTSADG-ERFWKMKEMFIKGNIIKYFRIA 58
>gi|47028291|gb|AAT09078.1| small nuclear ribonucleoprotein Sm-D1 [Bigelowiella natans]
Length = 120
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
F L + V VELKN + GT+ VD +N L + +T K P + + I
Sbjct: 3 LVKFLMRLNNETVTVELKNGTVVQGTISGVDMSMNTHLKIVKMTLKGKNP--VHLDTLSI 60
Query: 66 RGSVVRYVQLPGD-EVDTQLLQDATRK 91
RG+ +RY LP +D L+++ +K
Sbjct: 61 RGNNIRYFILPDSLNLDALLVEEVKKK 87
>gi|154342983|ref|XP_001567437.1| U6 snRNA-associated Sm-like protein LSm4p [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134064769|emb|CAM42875.1| U6 snRNA-associated Sm-like protein LSm4p [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 116
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
++ GK+V +EL + ++ GT+ D+ +N+ + + T D S + CFIRG+
Sbjct: 13 ILRNCRGKEVSIELSDGETVNGTVMRTDRAMNVVIKQCTRTGADGESFWKS-RECFIRGA 71
Query: 69 VVRYVQLPGDEVDTQLLQ---DATRKEAVN 95
V+ V++ D+ L+ A RK A N
Sbjct: 72 SVKNVRM----TDSALVSVPVPAKRKAAGN 97
>gi|146322817|ref|XP_749642.2| small nuclear ribonucleoprotein SmD1 [Aspergillus fumigatus
Af293]
gi|129556817|gb|EAL87604.2| small nuclear ribonucleoprotein SmD1, putative [Aspergillus
fumigatus Af293]
gi|159129049|gb|EDP54163.1| small nuclear ribonucleoprotein SmD1, putative [Aspergillus
fumigatus A1163]
Length = 120
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ +V +N L + +T + P +S+ IRGS
Sbjct: 6 FLMKCANETVTIELKNGTILHGTITAVSPQMNTSLRTVKMTPKGRDP--ISLDTINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ D + +
Sbjct: 64 TIRYYILPDSLPLDTLLVDDQPKPK 88
>gi|119480211|ref|XP_001260134.1| small nuclear ribonucleoprotein SmD1, putative [Neosartorya
fischeri NRRL 181]
gi|119408288|gb|EAW18237.1| small nuclear ribonucleoprotein SmD1, putative [Neosartorya
fischeri NRRL 181]
Length = 121
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ +V +N L + +T + P +S+ IRGS
Sbjct: 6 FLMKCANETVTIELKNGTILHGTITAVSPQMNTSLRTVKMTPKGRDP--ISLDTINIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ D + +
Sbjct: 64 TIRYYILPDSLPLDTLLVDDQPKPK 88
>gi|71032523|ref|XP_765903.1| small nuclear ribonucleoprotein F [Theileria parva strain Muguga]
gi|68352860|gb|EAN33620.1| small nuclear ribonucleoprotein F, putative [Theileria parva]
Length = 91
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTD 45
F SL GK VVV+LK + GTL S D Y+N++L+D
Sbjct: 19 FLTSLAGKTVVVKLKWGMEYKGTLKSFDSYMNLQLSD 55
>gi|389860536|ref|YP_006362775.1| Like-Sm ribonucleoprotein, core [Thermogladius cellulolyticus
1633]
gi|388525439|gb|AFK50637.1| Like-Sm ribonucleoprotein, core [Thermogladius cellulolyticus
1633]
Length = 76
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 7 YSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIR 66
Y + VGK V++++K +VSI G L S DQ+LNI L D D L IR
Sbjct: 7 YKLLEENVGKIVLIKMKGEVSIRGKLRSYDQHLNIVLDDAEEVRGDGSSRKLG--TLVIR 64
Query: 67 GSVV 70
G V
Sbjct: 65 GDTV 68
>gi|212537193|ref|XP_002148752.1| U6 snRNA-associated Sm-like protein LSM4, putative [Talaromyces
marneffei ATCC 18224]
gi|210068494|gb|EEA22585.1| U6 snRNA-associated Sm-like protein LSM4, putative [Talaromyces
marneffei ATCC 18224]
Length = 170
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
++L + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 52 KMLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTTPEG-DRFFRLPE 110
Query: 63 CFIRGSVVRYVQLPGDEVD 81
++RG+ ++Y+++P + +D
Sbjct: 111 VYVRGNNIKYLRVPEEILD 129
>gi|393234430|gb|EJD41993.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 123
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + ++ ++ P +S+ IRG+
Sbjct: 6 FLMKLNNETVQIELKNGSVVNGTITGVDVQMNTHLKTVKLSTRNRDP--VSLDTLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP +DT L+ DA + ++
Sbjct: 64 NIRYFVLPDALPLDTLLVDDAPKPKS 89
>gi|45200801|ref|NP_986371.1| AGL296Wp [Ashbya gossypii ATCC 10895]
gi|44985499|gb|AAS54195.1| AGL296Wp [Ashbya gossypii ATCC 10895]
gi|374109616|gb|AEY98521.1| FAGL296Wp [Ashbya gossypii FDAG1]
Length = 168
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G+ + +ELKN +I G L +VD ++N+ L + D+ L + ++RGS ++Y++
Sbjct: 12 GQKLFIELKNGETIEGELVNVDNWMNLTLQSVVHAGSDQ---TLQLPEIYVRGSFIKYIR 68
Query: 75 LPGD 78
L D
Sbjct: 69 LQDD 72
>gi|366989241|ref|XP_003674388.1| hypothetical protein NCAS_0A14510 [Naumovozyma castellii CBS
4309]
gi|342300251|emb|CCC68009.1| hypothetical protein NCAS_0A14510 [Naumovozyma castellii CBS
4309]
Length = 182
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDIS---VTDPDKYPHMLSVKNC--FIRGSV 69
G+ + VELKN + G L +VD ++N+ L+++S +D P VK+ ++RG+
Sbjct: 12 GQQMRVELKNGEIVEGKLTNVDNWMNLTLSNVSEYKSSDTIATPQTEVVKSTEIYVRGTF 71
Query: 70 VRYVQLPGDEVD 81
++Y+ L D +D
Sbjct: 72 IKYINLQDDIID 83
>gi|328720327|ref|XP_003247002.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D1-like
[Acyrthosiphon pisum]
Length = 134
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN S+ GT+ VD +N L + +T + P + +RG+
Sbjct: 6 FLMKLSHETVTLELKNGTSVHGTITGVDVAMNTHLKTVKMTMKNNQP--IHYDTLSVRGN 63
Query: 69 VVRYVQLPGDEVDTQLLQDATRKEAVN 95
+RY LP LL D K +N
Sbjct: 64 NIRYFILPDSLTLETLLVDDAPKSRLN 90
>gi|46121885|ref|XP_385496.1| hypothetical protein FG05320.1 [Gibberella zeae PH-1]
Length = 154
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L S D ++N+ L ++ T P+ + +
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVSCDTWMNLTLKEVVQTSPEG-DRFVRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P + +D
Sbjct: 60 YVKGNNIKYLRVPDEIID 77
>gi|348513171|ref|XP_003444116.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like
[Oreochromis niloticus]
gi|432883312|ref|XP_004074261.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Oryzias
latipes]
Length = 119
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P L ++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQL--ESLSIRGN 63
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 64 NIRYFILP 71
>gi|27545253|ref|NP_775359.1| small nuclear ribonucleoprotein Sm D1 [Danio rerio]
gi|21105451|gb|AAM34669.1|AF506225_1 small nuclear ribonucleoprotein D1 [Danio rerio]
gi|47938075|gb|AAH71543.1| Snrpd1 protein [Danio rerio]
Length = 119
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P L ++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQL--ESLSIRGN 63
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 64 NIRYFILP 71
>gi|432105433|gb|ELK31648.1| Small nuclear ribonucleoprotein Sm D1 [Myotis davidii]
Length = 221
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
R+ F L + V +ELKN + GT+ VD +N L + +T ++ P + ++
Sbjct: 102 RMKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLET 159
Query: 63 CFIRGSVVRYVQLP 76
IRG+ +RY LP
Sbjct: 160 LSIRGNNIRYFILP 173
>gi|83272157|gb|ABC00745.1| putative small nuclear ribonucleoprotein D1 [Brassica napus]
Length = 118
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTVVHGTITGVDVSMNTHLKTVKMTLKGKNP--VTMDHLSLRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L++D R
Sbjct: 64 NIRYYILPDSLNLETLLVEDTPR 86
>gi|52345462|ref|NP_001004780.1| small nuclear ribonucleoprotein Sm D1 [Xenopus (Silurana)
tropicalis]
gi|148227202|ref|NP_001085322.1| small nuclear ribonucleoprotein Sm D1 [Xenopus laevis]
gi|49250837|gb|AAH74514.1| MGC69276 protein [Xenopus (Silurana) tropicalis]
gi|49255946|gb|AAH71069.1| MGC78968 protein [Xenopus laevis]
gi|76779906|gb|AAI06262.1| MGC78968 protein [Xenopus laevis]
gi|118835457|gb|AAI28954.1| MGC78968 protein [Xenopus laevis]
Length = 119
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V VELKN + GT+ VD +N L + +T ++ P + ++ IRG+
Sbjct: 6 FLMKLSHETVTVELKNGTQVHGTITGVDVSMNTHLKAVKMTVKNREP--VQLETLSIRGN 63
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 64 NIRYFILP 71
>gi|297848542|ref|XP_002892152.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337994|gb|EFH68411.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 117
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTIVHGTITGVDVSMNTHLKAVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L++D R
Sbjct: 64 NIRYYILPDSLNLETLLVEDTPR 86
>gi|148674280|gb|EDL06227.1| mCG21971 [Mus musculus]
Length = 134
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
R+ F L + V +ELKN + GT+ VD +N L + +T ++ P + ++
Sbjct: 15 RMKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLET 72
Query: 63 CFIRGSVVRYVQLP 76
I+G+ +RY LP
Sbjct: 73 LSIQGTNIRYFILP 86
>gi|15235510|ref|NP_192193.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
gi|4263519|gb|AAD15345.1| small nuclear riboprotein Sm-D1 [Arabidopsis thaliana]
gi|7269769|emb|CAB77769.1| small nuclear riboprotein Sm-D1-like protein [Arabidopsis
thaliana]
gi|21536940|gb|AAM61281.1| small nuclear riboprotein Sm-D1-like protein [Arabidopsis
thaliana]
gi|26450421|dbj|BAC42325.1| putative small nuclear riboprotein Sm-D1 [Arabidopsis thaliana]
gi|114050553|gb|ABI49426.1| At4g02840 [Arabidopsis thaliana]
gi|332656836|gb|AEE82236.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
Length = 116
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTIVHGTITGVDVSMNTHLKAVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L++D R
Sbjct: 64 NIRYYILPDSLNLETLLVEDTPR 86
>gi|121710142|ref|XP_001272687.1| small nuclear ribonucleoprotein SmD1, putative [Aspergillus
clavatus NRRL 1]
gi|119400837|gb|EAW11261.1| small nuclear ribonucleoprotein SmD1, putative [Aspergillus
clavatus NRRL 1]
Length = 123
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV +N L + +T + P +S+ +RGS
Sbjct: 6 FLMKCANETVTIELKNGTILHGTIISVSPQMNTALRTVKMTPKGRDP--ISLDTINVRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ D + +
Sbjct: 64 TIRYFILPDSLPLDTLLVDDQPKPK 88
>gi|145510436|ref|XP_001441151.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408390|emb|CAK73754.1| unnamed protein product [Paramecium tetraurelia]
Length = 128
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G DVV+E+K + G L +D+++N+KLT++ T D +K I+G+ ++Y +
Sbjct: 15 GSDVVIEVKAGDTYDGKLELLDKFMNVKLTNVKHTSKDGN-SFHGIKELLIKGNSIKYFR 73
Query: 75 LPGD 78
L D
Sbjct: 74 LNPD 77
>gi|300175666|emb|CBK20977.2| unnamed protein product [Blastocystis hominis]
Length = 108
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G V+VEL N G L + +N +LT++++ D + ++N +IRGS VRYV
Sbjct: 15 GNTVIVELTNGEKYRGHLVRAEDNMNCQLTNVTMRARD--GKLSKLENVYIRGSRVRYVV 72
Query: 75 LP 76
LP
Sbjct: 73 LP 74
>gi|242809941|ref|XP_002485479.1| U6 snRNA-associated Sm-like protein LSM4, putative [Talaromyces
stipitatus ATCC 10500]
gi|218716104|gb|EED15526.1| U6 snRNA-associated Sm-like protein LSM4, putative [Talaromyces
stipitatus ATCC 10500]
Length = 118
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L + D ++N+ L ++ T P D++ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDNWMNLTLKEVVQTTPEGDRF---FRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
++RG+ ++Y+++P + +D
Sbjct: 58 EVYVRGNNIKYLRVPEEILD 77
>gi|402902787|ref|XP_003914277.1| PREDICTED: uncharacterized protein LOC101001281 [Papio anubis]
Length = 266
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 3 RLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKN 62
R+ F L + V +ELKN + GT+ VD +N L + +T ++ P + ++
Sbjct: 108 RMKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLET 165
Query: 63 CFIRGSVVRYVQLP 76
IRG+ +RY LP
Sbjct: 166 LSIRGNNIRYFILP 179
>gi|301090235|ref|XP_002895342.1| small nuclear ribonucleoprotein Sm D1 [Phytophthora infestans
T30-4]
gi|262100456|gb|EEY58508.1| small nuclear ribonucleoprotein Sm D1 [Phytophthora infestans
T30-4]
Length = 105
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 13 LVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRY 72
L + V +ELKN + GT+ VD +N L + +T K P +++ + IRG+ +RY
Sbjct: 3 LSNETVTIELKNGTLVHGTITGVDISMNTHLKAVKMTVKGKNP--VNLDSLSIRGNNIRY 60
Query: 73 VQLPGD-EVDTQLLQDATRKE 92
LP +DT L+ D R++
Sbjct: 61 YILPDSLNLDTLLIDDTPREK 81
>gi|159489002|ref|XP_001702486.1| prediceted snRNP core protein [Chlamydomonas reinhardtii]
gi|158280508|gb|EDP06265.1| prediceted snRNP core protein [Chlamydomonas reinhardtii]
Length = 225
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 11 KSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDIS 47
KSL+ + VVVEL+ND + G L VD +LN+ L+D++
Sbjct: 77 KSLIERRVVVELRNDTLVKGQLDDVDDFLNMTLSDVT 113
>gi|330802087|ref|XP_003289052.1| hypothetical protein DICPUDRAFT_79815 [Dictyostelium purpureum]
gi|325080886|gb|EGC34423.1| hypothetical protein DICPUDRAFT_79815 [Dictyostelium purpureum]
Length = 149
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G V VELKN GTL + +N ++ +I+VT D + C++RGS VR++
Sbjct: 15 GHIVTVELKNGELYRGTLIESEDNMNCRMKNITVTAKDGRNSQMEY--CYVRGSKVRFII 72
Query: 75 LP 76
LP
Sbjct: 73 LP 74
>gi|428671714|gb|EKX72629.1| U6 snRNA-associated protein, putative [Babesia equi]
Length = 111
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + ++ + ++ELKN + G L S D ++NI + ++ T + C
Sbjct: 2 VLPLTLLRAGKNQPTLIELKNGETYSGILESCDAFMNIHMLNVVCTSKSGT-DFWKLNEC 60
Query: 64 FIRGSVVRYVQLPGD--EVDTQLLQDATRKEAV 94
+IRG+ V+ ++LP + E+ + + A + AV
Sbjct: 61 YIRGNNVKSLRLPNEVAELAKEESKPAAKPNAV 93
>gi|378734306|gb|EHY60765.1| hypothetical protein HMPREF1120_08709 [Exophiala dermatitidis
NIH/UT8656]
Length = 135
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVNCDTWMNLTLKEVVQTSPEG-DRFWRLPEA 59
Query: 64 FIRGSVVRYVQLPGDEVD 81
++RG+ ++Y+++P + ++
Sbjct: 60 YVRGNNIKYLRVPEEIIE 77
>gi|326922125|ref|XP_003207302.1| PREDICTED: LOW QUALITY PROTEIN: small nuclear ribonucleoprotein
Sm D1-like [Meleagris gallopavo]
Length = 118
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCF 64
+ F L + V +ELKN + GT+ VD +N L + +T ++ P + ++
Sbjct: 1 MIKRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLETLS 58
Query: 65 IRGSVVRYVQLP 76
IRG+ +RY LP
Sbjct: 59 IRGNNIRYFILP 70
>gi|297814015|ref|XP_002874891.1| hypothetical protein ARALYDRAFT_490274 [Arabidopsis lyrata subsp.
lyrata]
gi|297320728|gb|EFH51150.1| hypothetical protein ARALYDRAFT_490274 [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTIVHGTITGVDVSMNTHLKAVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L++D R
Sbjct: 64 NIRYYILPDSLNLETLLVEDTPR 86
>gi|67540086|ref|XP_663817.1| hypothetical protein AN6213.2 [Aspergillus nidulans FGSC A4]
gi|40738809|gb|EAA57999.1| hypothetical protein AN6213.2 [Aspergillus nidulans FGSC A4]
Length = 775
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G ++VELKN ++ G L + D ++N+ L ++ T P+ + ++RG+ ++Y++
Sbjct: 22 GHPMLVELKNGETLNGHLANCDNWMNLILREVVQTSPEG-DRFFKLPEVYVRGNNIKYLR 80
Query: 75 LPGDEVD 81
+P + +D
Sbjct: 81 IPEEIID 87
>gi|302854281|ref|XP_002958650.1| hypothetical protein VOLCADRAFT_99939 [Volvox carteri f.
nagariensis]
gi|300256039|gb|EFJ40316.1| hypothetical protein VOLCADRAFT_99939 [Volvox carteri f.
nagariensis]
Length = 266
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 2 ERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDIS 47
E KSLV + VVVEL+ND+ + G L VD +LN+ L++++
Sbjct: 39 EETTLVCLIKSLVERKVVVELRNDILLRGRLDDVDDFLNMSLSEVT 84
>gi|358382645|gb|EHK20316.1| hypothetical protein TRIVIDRAFT_68894 [Trichoderma virens Gv29-8]
Length = 129
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L D ++N+ L ++ T P DK+ + +
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVMCDTWMNLTLKEVVQTSPEGDKF---MRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P + +D
Sbjct: 58 EVYVKGNNIKYLRVPDEIID 77
>gi|164661203|ref|XP_001731724.1| hypothetical protein MGL_0992 [Malassezia globosa CBS 7966]
gi|159105625|gb|EDP44510.1| hypothetical protein MGL_0992 [Malassezia globosa CBS 7966]
Length = 126
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 14 VGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPD-KYPHMLSVKNCFIRGSVVRY 72
+G V +ELK + G L + NI + DI+VT D K H+ SV +IRG+++R+
Sbjct: 15 LGHTVTIELKGGATYRGRLFDAEDNFNISMKDIAVTARDGKQTHLDSV---YIRGNMIRF 71
Query: 73 VQLP 76
+ +P
Sbjct: 72 MVVP 75
>gi|300122633|emb|CBK23201.2| unnamed protein product [Blastocystis hominis]
Length = 152
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L S ++ +++VEL N + G L S D Y+N+ L D +T + C
Sbjct: 18 MLPLSLLRAARDNEILVELTNGETYNGKLVSCDSYMNLVLNDAILTTKTG-SRFFHLSEC 76
Query: 64 FIRGSVVRYVQLPGDEVD 81
+IRG+ V+ ++L D ++
Sbjct: 77 YIRGATVKCIRLSKDVIN 94
>gi|121715750|ref|XP_001275484.1| small nuclear ribonucleoprotein [Aspergillus clavatus NRRL 1]
gi|119403641|gb|EAW14058.1| small nuclear ribonucleoprotein [Aspergillus clavatus NRRL 1]
Length = 119
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L + D ++N+ L ++ P D++ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLANCDNWMNLILKEVVQASPEGDRF---FRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+IRG+ ++Y+++P + V+
Sbjct: 58 EVYIRGNNIKYLRIPEEIVE 77
>gi|149720998|ref|XP_001492698.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Equus
caballus]
Length = 116
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + ++ IRG+
Sbjct: 3 FLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLETLSIRGN 60
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 61 NIRYFILP 68
>gi|111226987|ref|XP_001134627.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|90971301|gb|EAS66961.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 146
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G V VELKN GTL + +N ++ +I+VT D + C++RGS VR++
Sbjct: 15 GHIVTVELKNGELYRGTLIESEDNMNCRMKNITVTARDGRNSQMEY--CYVRGSKVRFII 72
Query: 75 LP 76
LP
Sbjct: 73 LP 74
>gi|440897495|gb|ELR49167.1| hypothetical protein M91_06507, partial [Bos grunniens mutus]
Length = 121
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + ++ IRG+
Sbjct: 1 FLTKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLETLSIRGN 58
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 59 NIRYFILP 66
>gi|397636074|gb|EJK72132.1| hypothetical protein THAOC_06366, partial [Thalassiosira
oceanica]
Length = 385
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 30 GTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI--RGSVVRYVQLPGDEVD 81
G L S D Y+NI L D+ T D + C+I RGS V+Y++LP + VD
Sbjct: 10 GRLVSCDTYMNINLRDVVCTSKDG-DQFWKLNECYIRCRGSSVKYLRLPEEAVD 62
>gi|351709761|gb|EHB12680.1| Small nuclear ribonucleoprotein Sm D1, partial [Heterocephalus
glaber]
Length = 115
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + ++ IRG+
Sbjct: 2 FLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLETLSIRGN 59
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 60 NIRYFILP 67
>gi|281354424|gb|EFB30008.1| hypothetical protein PANDA_018320 [Ailuropoda melanoleuca]
Length = 90
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + ++ IRG+
Sbjct: 2 FLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLETLSIRGN 59
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 60 NIRYFILP 67
>gi|347837957|emb|CCD52529.1| hypothetical protein [Botryotinia fuckeliana]
Length = 122
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELK+ ++ G L S D ++N+ L ++ T P DK+ + +
Sbjct: 2 VLPLGLLTAAQGHPMLVELKDGETLNGHLVSCDTWMNLTLKEVVQTSPDGDKFTRLPEI- 60
Query: 62 NCFIRGSVVRYVQLPGDEVDTQLLQDATRKEAVN 95
+++G+ ++Y+++P + +D L++D + + N
Sbjct: 61 --YVKGNNIKYLRMPDEIID--LVKDQQQGQQSN 90
>gi|402580557|gb|EJW74507.1| Sm protein [Wuchereria bancrofti]
Length = 116
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 11 KSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVV 70
+++ G VVVELKN ++ G L D +NI++ +++ D ++ L + I+G +
Sbjct: 23 QAMEGSSVVVELKNYSTVQGILAGCDDAMNIEMKTVTIHDFKRHSTPLHCDSFHIQGKFI 82
Query: 71 RYVQL 75
R+V
Sbjct: 83 RFVHF 87
>gi|209877859|ref|XP_002140371.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209555977|gb|EEA06022.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 112
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRG 67
S +S ++VELKN + G L VD ++N+ L ++ T D + C++RG
Sbjct: 6 SVIRSANKHSIMVELKNGETYSGMLIGVDGFMNLVLNNVISTSKDG-QRFFRMSECYLRG 64
Query: 68 SVVRYVQLPGDEVDT 82
+ ++Y+++ + + T
Sbjct: 65 NNIKYIRMNDNIIGT 79
>gi|431896295|gb|ELK05711.1| Small nuclear ribonucleoprotein Sm D1 [Pteropus alecto]
Length = 122
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + ++ IRG+
Sbjct: 9 FLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLETLSIRGN 66
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 67 NIRYFILP 74
>gi|402466238|gb|EJW01770.1| hypothetical protein EDEG_00361 [Edhazardia aedis USNM 41457]
Length = 121
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT------DPDKYPHMLSVKNCFIRGS 68
GK VVVELKN+ G L D +N+ L ++SVT P L + C+++GS
Sbjct: 12 GKKVVVELKNNDVYEGLLKGCDLSMNLFLKNVSVTKTFLQCKEGFEPEYL--QECYLKGS 69
Query: 69 VVRYVQLPGDEVDTQ 83
V+++++L + ++ Q
Sbjct: 70 VIKHIRLHNEVLNVQ 84
>gi|326933035|ref|XP_003212615.1| PREDICTED: u7 snRNA-associated Sm-like protein LSm10-like
[Meleagris gallopavo]
Length = 123
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+ L G V+L+++ + G + +VD ++N++L ++ TD L F+ G
Sbjct: 20 LLQGLHGHVTTVDLRDESTATGRVANVDAFMNMRLAQVTFTDRRGVVSQLD--EIFVAGR 77
Query: 69 VVRYVQLPGDEVD 81
VRYV +P D+VD
Sbjct: 78 NVRYVHIP-DQVD 89
>gi|85000985|ref|XP_955211.1| u6 snrna-associated sm-like protein lsm4 [Theileria annulata
strain Ankara]
gi|65303357|emb|CAI75735.1| u6 snrna-associated sm-like protein lsm4, putative [Theileria
annulata]
Length = 105
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + ++ + ++ELKN + G L S D ++N+ + ++ T + C
Sbjct: 2 VLPLTLLRAGKSQPTLIELKNGETYSGILDSCDAFMNMHMVNVVCTSKSG-TDFWKLDEC 60
Query: 64 FIRGSVVRYVQLPGDEVDTQLLQDATRK 91
FIRG+ V+ ++LP + + + RK
Sbjct: 61 FIRGNTVKSLRLPNEVAEIAKEEKHPRK 88
>gi|384254045|gb|EIE27519.1| Sm-like ribonucleo protein [Coccomyxa subellipsoidea C-169]
Length = 117
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIR 66
K+ V+VELKN + G + D ++N+ L ++ T D D++ + +IR
Sbjct: 6 LLKTAQKHPVLVELKNGETYNGHMVQCDSWMNVHLREVICTSKDGDRF---WRIPETYIR 62
Query: 67 GSVVRYVQLPGDEVDTQLLQDATRKEAVNA 96
G+ ++Y+++P + +D ++ R E A
Sbjct: 63 GNTIKYLRVPDEVIDKVKEENYKRDEKRPA 92
>gi|425765914|gb|EKV04555.1| U6 snRNA-associated Sm-like protein LSM4, putative [Penicillium
digitatum PHI26]
gi|425779249|gb|EKV17325.1| U6 snRNA-associated Sm-like protein LSM4, putative [Penicillium
digitatum Pd1]
Length = 121
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVTCDNFMNLILREVVQTSPEG-DRFFRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVD 81
+IRG+ ++Y+++P + V+
Sbjct: 60 YIRGNNIKYLRVPEEIVE 77
>gi|60832252|gb|AAX37003.1| small nuclear ribonucleoprotein D1 polypeptide [synthetic
construct]
Length = 120
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + ++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLETLSIRGN 63
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 64 NIRYFILP 71
>gi|5902102|ref|NP_008869.1| small nuclear ribonucleoprotein Sm D1 [Homo sapiens]
gi|6678055|ref|NP_033252.1| small nuclear ribonucleoprotein Sm D1 [Mus musculus]
gi|78050059|ref|NP_001030237.1| small nuclear ribonucleoprotein Sm D1 [Bos taurus]
gi|157818069|ref|NP_001099633.1| small nuclear ribonucleoprotein Sm D1 [Rattus norvegicus]
gi|350535747|ref|NP_001232444.1| putative small nuclear ribonucleoprotein D1 [Taeniopygia guttata]
gi|386780612|ref|NP_001247758.1| small nuclear ribonucleoprotein Sm D1 [Macaca mulatta]
gi|57089749|ref|XP_537302.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Canis lupus
familiaris]
gi|114672526|ref|XP_512054.2| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Pan
troglodytes]
gi|126321779|ref|XP_001363297.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like
[Monodelphis domestica]
gi|296222369|ref|XP_002757161.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Callithrix
jacchus]
gi|297702359|ref|XP_002828147.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Pongo abelii]
gi|301785950|ref|XP_002928390.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Ailuropoda
melanoleuca]
gi|311259030|ref|XP_003127902.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Sus
scrofa]
gi|327282141|ref|XP_003225802.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Anolis
carolinensis]
gi|348576770|ref|XP_003474159.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Cavia
porcellus]
gi|354481732|ref|XP_003503055.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Cricetulus
griseus]
gi|395511627|ref|XP_003760058.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Sarcophilus
harrisii]
gi|395823105|ref|XP_003784837.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Otolemur
garnettii]
gi|397489347|ref|XP_003815691.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Pan paniscus]
gi|403265201|ref|XP_003924835.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 isoform 1
[Saimiri boliviensis boliviensis]
gi|403265203|ref|XP_003924836.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 isoform 2
[Saimiri boliviensis boliviensis]
gi|410977436|ref|XP_003995111.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Felis catus]
gi|426253705|ref|XP_004020533.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Ovis aries]
gi|51338665|sp|P62314.1|SMD1_HUMAN RecName: Full=Small nuclear ribonucleoprotein Sm D1; Short=Sm-D1;
AltName: Full=Sm-D autoantigen; AltName: Full=snRNP
core protein D1
gi|60413325|sp|P62315.1|SMD1_MOUSE RecName: Full=Small nuclear ribonucleoprotein Sm D1; Short=Sm-D1;
AltName: Full=Sm-D autoantigen; AltName: Full=snRNP
core protein D1
gi|75076018|sp|Q4R5F6.1|SMD1_MACFA RecName: Full=Small nuclear ribonucleoprotein Sm D1; Short=Sm-D1;
AltName: Full=snRNP core protein D1
gi|109894869|sp|Q3ZC10.1|SMD1_BOVIN RecName: Full=Small nuclear ribonucleoprotein Sm D1; Short=Sm-D1;
AltName: Full=snRNP core protein D1
gi|6980598|pdb|1B34|A Chain A, Crystal Structure Of The D1d2 Sub-Complex From The Human
Snrnp Core Domain
gi|225734042|pdb|3CW1|B Chain B, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734051|pdb|3CW1|M Chain M, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734060|pdb|3CW1|N Chain N, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734069|pdb|3CW1|O Chain O, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|315583602|pdb|3PGW|X Chain X, Crystal Structure Of Human U1 Snrnp
gi|315583611|pdb|3PGW|U Chain U, Crystal Structure Of Human U1 Snrnp
gi|332639434|pdb|2Y9A|B Chain B, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639441|pdb|2Y9A|I Chain I, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639448|pdb|2Y9A|P Chain P, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639458|pdb|2Y9B|B Chain B, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639465|pdb|2Y9B|I Chain I, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639472|pdb|2Y9B|P Chain P, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639482|pdb|2Y9C|B Chain B, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639489|pdb|2Y9C|I Chain I, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639496|pdb|2Y9C|P Chain P, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639506|pdb|2Y9D|B Chain B, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639513|pdb|2Y9D|I Chain I, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639520|pdb|2Y9D|P Chain P, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|343781210|pdb|3S6N|A Chain A, Crystal Structure Of The Gemin2-Binding Domain Of Smn,
Gemin2 In Complex With Smd1D2FEG FROM HUMAN
gi|444302196|pdb|4F7U|A Chain A, Macromolecular Machine 6
gi|444302198|pdb|4F7U|C Chain C, Macromolecular Machine 6
gi|453055422|pdb|1VU2|A Chain A, The 8s Snrnp Assembly Intermediate
gi|453055430|pdb|1VU2|I Chain I, The 8s Snrnp Assembly Intermediate
gi|453055438|pdb|1VU2|Q Chain Q, The 8s Snrnp Assembly Intermediate
gi|453055446|pdb|1VU2|Y Chain Y, The 8s Snrnp Assembly Intermediate
gi|453055454|pdb|1VU2|GG Chain g, The 8s Snrnp Assembly Intermediate
gi|453055462|pdb|1VU2|OO Chain o, The 8s Snrnp Assembly Intermediate
gi|453055474|pdb|1VU2|WW Chain w, The 8s Snrnp Assembly Intermediate
gi|453055478|pdb|1VU3|A Chain A, The 8s Snrnp Assembly Intermediate
gi|453055486|pdb|1VU3|I Chain I, The 8s Snrnp Assembly Intermediate
gi|453055494|pdb|1VU3|Q Chain Q, The 8s Snrnp Assembly Intermediate
gi|453055502|pdb|1VU3|Y Chain Y, The 8s Snrnp Assembly Intermediate
gi|453055510|pdb|1VU3|GG Chain g, The 8s Snrnp Assembly Intermediate
gi|453055518|pdb|1VU3|OO Chain o, The 8s Snrnp Assembly Intermediate
gi|453056010|pdb|4F77|I Chain I, The 8s Snrnp Assembly Intermediate
gi|453056018|pdb|4F77|A Chain A, The 8s Snrnp Assembly Intermediate
gi|453056026|pdb|4F77|Q Chain Q, The 8s Snrnp Assembly Intermediate
gi|453056034|pdb|4F77|Y Chain Y, The 8s Snrnp Assembly Intermediate
gi|453056042|pdb|4F77|GG Chain g, The 8s Snrnp Assembly Intermediate
gi|453056050|pdb|4F77|OO Chain o, The 8s Snrnp Assembly Intermediate
gi|453056062|pdb|4F77|WW Chain w, The 8s Snrnp Assembly Intermediate
gi|338265|gb|AAA36620.1| small nuclear riboprotein Sm-D [Homo sapiens]
gi|705366|gb|AAA85339.1| small nuclear ribonucleoprotein [Homo sapiens]
gi|1256741|gb|AAA96493.1| Sm-D autoantigen [Mus musculus]
gi|12804599|gb|AAH01721.1| Small nuclear ribonucleoprotein D1 polypeptide 16kDa [Homo
sapiens]
gi|12838127|dbj|BAB24092.1| unnamed protein product [Mus musculus]
gi|12841366|dbj|BAB25178.1| unnamed protein product [Mus musculus]
gi|12847588|dbj|BAB27628.1| unnamed protein product [Mus musculus]
gi|12850214|dbj|BAB28635.1| unnamed protein product [Mus musculus]
gi|19354162|gb|AAH24875.1| Small nuclear ribonucleoprotein D1 [Mus musculus]
gi|48734707|gb|AAH72427.1| Small nuclear ribonucleoprotein D1 polypeptide 16kDa [Homo
sapiens]
gi|49457472|emb|CAG47035.1| SNRPD1 [Homo sapiens]
gi|67970653|dbj|BAE01669.1| unnamed protein product [Macaca fascicularis]
gi|73586929|gb|AAI02988.1| Small nuclear ribonucleoprotein D1 polypeptide 16kDa [Bos taurus]
gi|74144965|dbj|BAE22192.1| unnamed protein product [Mus musculus]
gi|74193588|dbj|BAE22759.1| unnamed protein product [Mus musculus]
gi|119621535|gb|EAX01130.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Homo
sapiens]
gi|149031722|gb|EDL86672.1| small nuclear ribonucleoprotein D1 (predicted) [Rattus
norvegicus]
gi|187469818|gb|AAI67095.1| Small nuclear ribonucleoprotein D1 [Rattus norvegicus]
gi|197127450|gb|ACH43948.1| putative small nuclear ribonucleoprotein D1 [Taeniopygia guttata]
gi|197127451|gb|ACH43949.1| putative small nuclear ribonucleoprotein D1 [Taeniopygia guttata]
gi|197129948|gb|ACH46446.1| putative small nuclear ribonucleoprotein D1 [Taeniopygia guttata]
gi|197692155|dbj|BAG70041.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Homo
sapiens]
gi|197692401|dbj|BAG70164.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Homo
sapiens]
gi|208967432|dbj|BAG73730.1| small nuclear ribonucleoprotein D1 polypeptide [synthetic
construct]
gi|296473819|tpg|DAA15934.1| TPA: small nuclear ribonucleoprotein Sm D1 [Bos taurus]
gi|344251470|gb|EGW07574.1| Small nuclear ribonucleoprotein Sm D1 [Cricetulus griseus]
gi|380815842|gb|AFE79795.1| small nuclear ribonucleoprotein Sm D1 [Macaca mulatta]
gi|383420995|gb|AFH33711.1| small nuclear ribonucleoprotein Sm D1 [Macaca mulatta]
gi|384948966|gb|AFI38088.1| small nuclear ribonucleoprotein Sm D1 [Macaca mulatta]
gi|410215894|gb|JAA05166.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Pan
troglodytes]
gi|410253718|gb|JAA14826.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Pan
troglodytes]
gi|410297902|gb|JAA27551.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Pan
troglodytes]
gi|410328399|gb|JAA33146.1| small nuclear ribonucleoprotein D1 polypeptide 16kDa [Pan
troglodytes]
Length = 119
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + ++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLETLSIRGN 63
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 64 NIRYFILP 71
>gi|67601489|ref|XP_666403.1| aspartyl protease-like [Cryptosporidium hominis TU502]
gi|54657392|gb|EAL36172.1| aspartyl protease-like [Cryptosporidium hominis]
Length = 128
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 14 VGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYV 73
+G V +ELK+ GTL V+ +N L ++ T D P +S++ C++RGS +R+
Sbjct: 14 LGHIVTIELKSGDLYRGTLTHVEDNMNCMLEHVNATMRDGKP--VSLEQCYLRGSQIRFC 71
Query: 74 QLP 76
LP
Sbjct: 72 ILP 74
>gi|346325131|gb|EGX94728.1| U6 snRNA-associated Sm-like protein LSM4, putative [Cordyceps
militaris CM01]
Length = 163
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVKNCFIRGSVVRY 72
G ++VELKN ++ G L + D ++N+ LT + T P DK+ + +K +++G+ ++Y
Sbjct: 47 GHPMLVELKNGETLNGHLVNCDTWMNLTLTQVVQTSPEGDKF---MRLKEVYVKGNNIKY 103
Query: 73 VQLPGDEVD 81
+++ + ++
Sbjct: 104 LRVAEEIIE 112
>gi|255946281|ref|XP_002563908.1| Pc20g14300 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588643|emb|CAP86759.1| Pc20g14300 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 121
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 1 MLPLGLLTAAQGHPMLVELKNGETLNGHLVTCDNFMNLILREVVQTSPEGD-RFFRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVD 81
+IRG+ ++Y+++P + V+
Sbjct: 60 YIRGNNIKYLRVPEEIVE 77
>gi|281212453|gb|EFA86613.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 140
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN I GT+ VD +N L + +T K P +++ + IRG+
Sbjct: 3 FLMKLHNETVTIELKNGTIIHGTISGVDVSMNTHLKTVKLTLKGKNP--INLDSLSIRGN 60
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 61 NIRYFILP 68
>gi|124804217|ref|XP_001347937.1| small nuclear ribonucleoprotein D1, putative [Plasmodium
falciparum 3D7]
gi|23496190|gb|AAN35850.1|AE014839_59 small nuclear ribonucleoprotein D1, putative [Plasmodium
falciparum 3D7]
Length = 126
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDK--------YPHMLSV 60
F L ++V +ELKN I G + +VD +N + ++ V +K LS+
Sbjct: 6 FLMKLTNENVTIELKNGTLITGIITAVDIKMNTHMKNVKVVIKNKNIAEYNVNTKQFLSL 65
Query: 61 KNCFIRGSVVRYVQLPGD-EVDTQLLQDATRKE 92
++ IRG+ +RY L +D+ L++D T K+
Sbjct: 66 EHVTIRGNNIRYFILSDSLPLDSLLVEDTTPKK 98
>gi|427786235|gb|JAA58569.1| Putative small nuclear ribonucleoprotein d1 [Rhipicephalus
pulchellus]
Length = 120
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + + + IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTITGVDVAMNTHLKAVKMTMKNREP--VQLDSLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA 88
+RY LP ++T L+ D
Sbjct: 64 NIRYYLLPDSLPLETLLIDDT 84
>gi|189028861|sp|A6S5C9.2|LSM6_BOTFB RecName: Full=U6 snRNA-associated Sm-like protein LSm6
gi|347826617|emb|CCD42314.1| similar to U6 snRNA-associated Sm-like protein LSm6 [Botryotinia
fuckeliana]
Length = 85
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 8 SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDIS--VTDPDKYPHMLSVKNCFI 65
SF ++G V+V+L N + G L SVD Y+NI L V K H + F+
Sbjct: 16 SFLSEIIGSKVIVKLNNSLVFKGELQSVDGYMNIALEKCEEWVHGKKKTVH----GDAFV 71
Query: 66 RGSVVRYV 73
RG+ V Y+
Sbjct: 72 RGNNVMYI 79
>gi|442757617|gb|JAA70967.1| Putative small nuclear ribonucleoprotein d1 [Ixodes ricinus]
Length = 118
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + + + IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTITGVDVAMNTHLKAVKMTMKNREP--VQLDSLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA 88
+RY LP ++T L+ D
Sbjct: 64 NIRYYLLPDSLPLETLLIDDT 84
>gi|66362186|ref|XP_628057.1| small nucealr riboprotein SMD3, SM domain [Cryptosporidium parvum
Iowa II]
gi|46227630|gb|EAK88565.1| small nucealr riboprotein SMD3, SM domain [Cryptosporidium parvum
Iowa II]
Length = 143
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 14 VGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYV 73
+G V +ELK+ GTL V+ +N L ++ T D P +S++ C++RGS +R+
Sbjct: 36 LGHIVTIELKSGDLYRGTLTHVEDNMNCMLEHVNATMRDGKP--VSLEQCYLRGSQIRFC 93
Query: 74 QLP 76
LP
Sbjct: 94 ILP 96
>gi|339243513|ref|XP_003377682.1| putative small nuclear ribonucleoprotein Sm D3 [Trichinella
spiralis]
gi|316973493|gb|EFV57073.1| putative small nuclear ribonucleoprotein Sm D3 [Trichinella
spiralis]
Length = 168
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
+F ++GK +VVEL + S G L D +N+ D S K + V ++RGS
Sbjct: 44 YFICMIGKKIVVELNENSSAIGNLQHFDNDMNLICKDASFI--TKNGSITKVDMLYLRGS 101
Query: 69 VVRYVQLPGDEVDTQLLQDATRKEAVNA 96
+RY+ P D D +LQ R A +
Sbjct: 102 KIRYI-YPAD--DDCVLQTRNRGAATKS 126
>gi|363814443|ref|NP_001242856.1| uncharacterized protein LOC100778485 [Glycine max]
gi|255640505|gb|ACU20538.1| unknown [Glycine max]
Length = 114
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGAVVHGTITGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++A +
Sbjct: 64 NIRYYILPDSLNLETLLVEEAPK 86
>gi|344303431|gb|EGW33680.1| hypothetical protein SPAPADRAFT_59049 [Spathaspora passalidarum
NRRL Y-27907]
Length = 123
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSV 60
M+ + F + + + VELKN +I GTL S +N+ L ++ + P + +L
Sbjct: 1 MKLVRFLMNIPNSTNQPLTVELKNGTTINGTLMSCSPSMNLSLKNVKLQQPLQDATLLQF 60
Query: 61 KNCFIRGSVVRYVQLPGDEVD 81
N IRG+ +R + LP DE++
Sbjct: 61 IN--IRGNQIRQILLP-DELN 78
>gi|336274282|ref|XP_003351895.1| hypothetical protein SMAC_00442 [Sordaria macrospora k-hell]
gi|380096178|emb|CCC06225.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 123
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV ++ L ++ +T + L N IRGS
Sbjct: 6 FLMKCANETVTIELKNGTIVHGTIASVTPRMDTALRNVKMTPKGQDAVALDAMN--IRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ D+ RKEA
Sbjct: 64 TIRYFILPDSLPLDTLLVDDSVKPKNKARKEA 95
>gi|226507836|ref|NP_001151154.1| LOC100284787 [Zea mays]
gi|195644674|gb|ACG41805.1| small nuclear ribonucleoprotein Sm D1 [Zea mays]
Length = 116
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++ R
Sbjct: 64 NIRYYILPDSLNLETLLVEETPR 86
>gi|226496545|ref|NP_001148353.1| small nuclear ribonucleoprotein Sm D1 [Zea mays]
gi|195618318|gb|ACG30989.1| small nuclear ribonucleoprotein Sm D1 [Zea mays]
gi|414586802|tpg|DAA37373.1| TPA: small nuclear ribonucleoprotein Sm D1 [Zea mays]
Length = 115
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++ R
Sbjct: 64 NIRYYILPDSLNLETLLVEETPR 86
>gi|242065592|ref|XP_002454085.1| hypothetical protein SORBIDRAFT_04g024330 [Sorghum bicolor]
gi|195604664|gb|ACG24162.1| small nuclear ribonucleoprotein Sm D1 [Zea mays]
gi|238011798|gb|ACR36934.1| unknown [Zea mays]
gi|241933916|gb|EES07061.1| hypothetical protein SORBIDRAFT_04g024330 [Sorghum bicolor]
gi|413922841|gb|AFW62773.1| Small nuclear ribonucleoprotein Sm D1 isoform 1 [Zea mays]
gi|413922842|gb|AFW62774.1| Small nuclear ribonucleoprotein Sm D1 isoform 2 [Zea mays]
Length = 114
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++ R
Sbjct: 64 NIRYYILPDSLNLETLLVEETPR 86
>gi|116196218|ref|XP_001223921.1| hypothetical protein CHGG_04707 [Chaetomium globosum CBS 148.51]
gi|88180620|gb|EAQ88088.1| hypothetical protein CHGG_04707 [Chaetomium globosum CBS 148.51]
Length = 127
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L D ++N+ L ++ T P DK+ + +
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVLCDTWMNLTLREVVQTSPEGDKF---VRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P D +D
Sbjct: 58 EVYVKGNNIKYLRVPDDIID 77
>gi|325303250|tpg|DAA34761.1| TPA_inf: small nuclear ribonucleoprotein SMD1 [Amblyomma
variegatum]
gi|346469165|gb|AEO34427.1| hypothetical protein [Amblyomma maculatum]
gi|346469167|gb|AEO34428.1| hypothetical protein [Amblyomma maculatum]
Length = 120
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + + + IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTITGVDVAMNTHLKAVKMTMRNREP--VQLDSLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA 88
+RY LP ++T L+ D
Sbjct: 64 NIRYYLLPDSLPLETLLIDDT 84
>gi|340960256|gb|EGS21437.1| hypothetical protein CTHT_0032950 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 769
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVKNCFIRGSVVRY 72
G ++VELKN ++ G L D ++N+ L ++ T P DK+ + V +++G+ ++Y
Sbjct: 12 GHPMLVELKNGETLNGHLVQCDTWMNLTLREVVQTSPEGDKFMRLPEV---YVKGNNIKY 68
Query: 73 VQLPGDEVD 81
+++P + +D
Sbjct: 69 LRVPDEIID 77
>gi|405973300|gb|EKC38022.1| Small nuclear ribonucleoprotein Sm D1 [Crassostrea gigas]
Length = 688
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T +K P + V IRG+
Sbjct: 573 FLMKLSHETVTIELKNGTQVHGTVTGVDVCMNTHLKAVKMTIKNKDP--VQVDTLSIRGN 630
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ D + +
Sbjct: 631 NIRYYILPDSLPLDTLLIDDTPKAK 655
>gi|85112250|ref|XP_964309.1| small nuclear ribonucleoprotein Sm D1 [Neurospora crassa OR74A]
gi|28926086|gb|EAA35073.1| small nuclear ribonucleoprotein Sm D1 [Neurospora crassa OR74A]
Length = 123
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELKN + GT+ SV ++ L ++ +T + L N IRGS
Sbjct: 6 FLMKCANETVTIELKNGTIVHGTIASVTPRMDTALRNVKMTPKGQDAVALDAMN--IRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA------TRKEA 93
+RY LP +DT L+ D+ RKEA
Sbjct: 64 TIRYFILPDSLPLDTLLVDDSVKPKNKARKEA 95
>gi|443897116|dbj|GAC74458.1| small nuclear ribonucleoprotein [Pseudozyma antarctica T-34]
Length = 244
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 19 VVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQLPGD 78
+VELKN + G L + D ++N+ L ++ T K C+IRGS ++Y ++
Sbjct: 125 LVELKNGSTFNGHLVACDNFMNLTLREVYETSASGE-QFWKQKECYIRGSTIKYCRVADS 183
Query: 79 EVDT-QLLQDATRKE 92
+D + ++A RK+
Sbjct: 184 VIDQVKETEEAARKQ 198
>gi|356504916|ref|XP_003521240.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
[Glycine max]
gi|356504918|ref|XP_003521241.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 2
[Glycine max]
Length = 114
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++A +
Sbjct: 64 NIRYYILPDSLNLETLLVEEAPK 86
>gi|428673180|gb|EKX74093.1| small ribonucleoprotein D1, putative [Babesia equi]
Length = 119
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ +D +N L ++ + D ++ + + +RG+
Sbjct: 6 FLMKLANESVTLELKNGTVMTGTIIGIDISMNTHLKNVKIVKKDN--SVILLDHLTVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP +DT L+ D +++
Sbjct: 64 SIRYYLLPDSIPLDTLLIDDTPKQKP 89
>gi|297829310|ref|XP_002882537.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328377|gb|EFH58796.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 102
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + ++ K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTVVHGTITGVDVSMNTHLKTVKMSLKGKNP--VTIDHLSLRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L++D R
Sbjct: 64 NIRYYILPDSLNLETLLVEDTPR 86
>gi|224066521|ref|XP_002302121.1| predicted protein [Populus trichocarpa]
gi|118482633|gb|ABK93236.1| unknown [Populus trichocarpa]
gi|118488779|gb|ABK96200.1| unknown [Populus trichocarpa]
gi|222843847|gb|EEE81394.1| predicted protein [Populus trichocarpa]
Length = 115
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTVKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++ R
Sbjct: 64 NIRYYILPDSLNLETLLVEETPR 86
>gi|406603457|emb|CCH45013.1| putative U6 snRNA-associated Sm-like protein LSm4
[Wickerhamomyces ciferrii]
Length = 112
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 6 FYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFI 65
F L + V +ELKN I GT+ SV +NI L + + ++ P +L N I
Sbjct: 3 LVRFLMKLNNETVQIELKNQTIIQGTIISVSPNMNIILKKVKMNIKNRDPQLLDYIN--I 60
Query: 66 RGSVVRYVQLPGDEVDTQLLQDAT 89
RG+++R V LP LLQ+++
Sbjct: 61 RGNMIRDVILPDSLNLDVLLQESS 84
>gi|209881474|ref|XP_002142175.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209557781|gb|EEA07826.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 126
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 14 VGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYV 73
+G + +E+K+ GTL V+ +N L ++VT D P L+++ C++RGS +R+
Sbjct: 14 LGHIISIEMKSGDLYRGTLAHVEDNMNCMLDTVNVTMKDGRP--LALEQCYLRGSQIRFF 71
Query: 74 QLP 76
LP
Sbjct: 72 ILP 74
>gi|332225775|ref|XP_003262059.1| PREDICTED: small nuclear ribonucleoprotein Sm D1 [Nomascus
leucogenys]
Length = 119
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + ++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTILGVDVSMNTHLKAVKMTLKNREP--VQLETLSIRGN 63
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 64 NIRYFILP 71
>gi|170596751|ref|XP_001902883.1| Sm protein [Brugia malayi]
gi|158589165|gb|EDP28269.1| Sm protein [Brugia malayi]
Length = 130
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 13 LVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRY 72
L K V +ELKN + G + SVD +N L +S+T + P SV IRG+ +RY
Sbjct: 3 LRNKFVTIELKNGTVVMGYVSSVDLAMNFHLNRVSMTLKSEKP--ASVDAVSIRGNNIRY 60
Query: 73 VQLPGD 78
+ P +
Sbjct: 61 IIFPNN 66
>gi|145549786|ref|XP_001460572.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428402|emb|CAK93175.1| unnamed protein product [Paramecium tetraurelia]
Length = 128
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 15 GKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYVQ 74
G DVV+E+K + G L +D+++N KLT++ T D +K I+G+ ++Y +
Sbjct: 15 GSDVVIEVKAGDTYDGKLELLDKFMNAKLTNVKHTSKDGN-SFHGIKELLIKGNSIKYFR 73
Query: 75 LPGD 78
L D
Sbjct: 74 LNPD 77
>gi|353238410|emb|CCA70357.1| probable small nuclear ribonucleoprotein SNRPD1 [Piriformospora
indica DSM 11827]
Length = 123
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P L + IRG+
Sbjct: 6 FLMKLNNETVTIELKNGSIVHGTITGVDMQMNTHLKTVRLTARNRDPQPLD--SLSIRGN 63
Query: 69 VVRYVQLP-GDEVDTQLLQD 87
+RY LP +DT L+ D
Sbjct: 64 NIRYFILPDALPLDTLLVDD 83
>gi|225462054|ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Vitis
vinifera]
Length = 114
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNP--VTMDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++ R
Sbjct: 64 NIRYYILPDSINLETLLVEETPR 86
>gi|402224280|gb|EJU04343.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 127
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 14 VGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYV 73
+G + VELK + G L + LNI L DI+VT D L + +IRGS+VR+
Sbjct: 16 LGHVITVELKTGQTYRGKLADAEDSLNISLRDITVTGRDGRVSQLD--SVYIRGSMVRFF 73
Query: 74 QLPGDEVDTQLLQDA 88
+P +LQ+A
Sbjct: 74 IVP------DMLQNA 82
>gi|402079351|gb|EJT74616.1| glycine rich protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 141
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELKN ++ G L D ++N+ + ++ T P DK+ + +
Sbjct: 1 MLPLGLLNAAQGHAMMVELKNGETLNGHLVMCDTWMNLTMKEVVQTSPEGDKF---MRLP 57
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P + +D
Sbjct: 58 EIYVKGNNIKYLRVPDEVID 77
>gi|392577030|gb|EIW70160.1| hypothetical protein TREMEDRAFT_38820 [Tremella mesenterica DSM
1558]
Length = 124
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 14 VGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYV 73
+G V VELK G L + LNI L DI+VT D + + +IRGS++R+V
Sbjct: 15 LGHVVTVELKTGEMYRGKLMEAEDNLNIALKDITVTARDGRVSQMDM--VYIRGSMIRFV 72
Query: 74 QLP 76
+P
Sbjct: 73 IVP 75
>gi|225436986|ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
[Vitis vinifera]
gi|225436988|ref|XP_002277231.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 2
[Vitis vinifera]
Length = 114
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++ R
Sbjct: 64 NIRYYILPDSLNLETLLVEETPR 86
>gi|403220738|dbj|BAM38871.1| small nuclear ribonucleoprotein f [Theileria orientalis strain
Shintoku]
Length = 84
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTD 45
F SL GK VVV+LK + GTL S D Y+N++L D
Sbjct: 16 FLTSLAGKAVVVKLKWGMEYKGTLKSFDSYMNLQLQD 52
>gi|291243481|ref|XP_002741624.1| PREDICTED: small nuclear ribonucleoprotein D1 polypeptide
16kDa-like isoform 1 [Saccoglossus kowalevskii]
Length = 118
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T +K P + + IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTLVRGTITGVDVSMNTHLKAVKMTVRNKDP--VQIDTLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA 88
+RY LP +DT L+ D
Sbjct: 64 NIRYFILPDSLPLDTLLVDDT 84
>gi|91093211|ref|XP_969739.1| PREDICTED: similar to small nuclear ribonucleoprotein at 69D
CG10753-PA [Tribolium castaneum]
gi|270016480|gb|EFA12926.1| hypothetical protein TcasGA2_TC010472 [Tribolium castaneum]
Length = 121
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + VT ++ P +++ +RG+
Sbjct: 6 FLMKLSHETVTMELKNGTQVHGTITGVDVAMNTHLKAVKVTVKNRNP--VNLDTLTVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDA 88
+RY LP ++T L+ D
Sbjct: 64 NIRYYILPDSLPLETLLIDDT 84
>gi|114050791|ref|NP_001040404.1| small nuclear ribonucleoprotein Sm D1 [Bombyx mori]
gi|95102768|gb|ABF51325.1| small nuclear ribonucleoprotein Sm D1 [Bombyx mori]
Length = 126
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + VT ++ L ++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGSVVHGTITGVDVAMNTHLKAVKVTLKNR--EELQLETLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKEA 93
+RY LP ++T L+ D + +
Sbjct: 64 NIRYYLLPDSLPLETWLIDDTPKGKG 89
>gi|291394184|ref|XP_002713641.1| PREDICTED: small nuclear ribonucleoprotein D1 polypeptide
16kDa-like [Oryctolagus cuniculus]
Length = 236
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + ++ IRG+
Sbjct: 123 FLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP--VQLETLSIRGN 180
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 181 NIRYFILP 188
>gi|156086674|ref|XP_001610746.1| small nuclear ribonucleoprotein Sm subunit [Babesia bovis T2Bo]
gi|154797999|gb|EDO07178.1| small nuclear ribonucleoprotein Sm subunit, putative [Babesia
bovis]
Length = 125
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPD----KYPHMLSVKNCF 64
F L + V VELKN + GT+ VD +N L ++ + + D P+ + + +
Sbjct: 6 FLMKLANESVTVELKNGTVLTGTVIGVDISMNTHLKNVKIVNKDSGSGSEPNYILLDHLT 65
Query: 65 IRGSVVRYVQLPGD-EVDTQLLQDATRKE 92
+RG+ +RY L +DT L+ D +++
Sbjct: 66 VRGNNIRYFILSDSLPLDTLLIDDTPKQK 94
>gi|449464778|ref|XP_004150106.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Cucumis
sativus]
gi|449476727|ref|XP_004154817.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Cucumis
sativus]
Length = 114
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKAVKLTLKGKNP--VTMDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++ R
Sbjct: 64 NIRYYILPDSLNLETLLVEETPR 86
>gi|307165950|gb|EFN60277.1| Probable malonyl CoA-acyl carrier protein transacylase,
mitochondrial [Camponotus floridanus]
Length = 463
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P + ++ +RG+
Sbjct: 346 FLMKLSHETVTIELKNGTQVTGTITGVDVAMNTHLKTVKMTIKNRDP--IQLETLSLRGN 403
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 404 NIRYYILP 411
>gi|300123335|emb|CBK24608.2| unnamed protein product [Blastocystis hominis]
Length = 79
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F S+ GK V++ L V G L S+D +LN+ L + K+ + +CF+RG+
Sbjct: 11 FIASVYGKPVIIGLFTGVIYKGILGSLDGFLNVVLEQAEEYNDGKF--VARFNDCFLRGN 68
Query: 69 VVRYVQLPGDEV 80
+ Y+ P DE+
Sbjct: 69 NIMYIA-PNDEI 79
>gi|296086730|emb|CBI32365.3| unnamed protein product [Vitis vinifera]
Length = 144
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 36 FLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 93
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++ R
Sbjct: 94 NIRYYILPDSLNLETLLVEETPR 116
>gi|255559488|ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus
communis]
gi|223540149|gb|EEF41726.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus
communis]
Length = 114
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++ R
Sbjct: 64 NIRYYILPDSLNLETLLVEETPR 86
>gi|15231485|ref|NP_187416.1| small nuclear ribonucleoprotein D1 [Arabidopsis thaliana]
gi|334185166|ref|NP_001189837.1| small nuclear ribonucleoprotein D1 [Arabidopsis thaliana]
gi|6466942|gb|AAF13077.1|AC009176_4 putative small nuclear ribonucleoprotein (Sm-D1) [Arabidopsis
thaliana]
gi|17978995|gb|AAL47458.1| AT3g07590/MLP3_4 [Arabidopsis thaliana]
gi|21593161|gb|AAM65110.1| putative small nuclear ribonucleoprotein Sm-D1 [Arabidopsis
thaliana]
gi|21700847|gb|AAM70547.1| AT3g07590/MLP3_4 [Arabidopsis thaliana]
gi|332641049|gb|AEE74570.1| small nuclear ribonucleoprotein D1 [Arabidopsis thaliana]
gi|332641050|gb|AEE74571.1| small nuclear ribonucleoprotein D1 [Arabidopsis thaliana]
Length = 114
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + ++ K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTVVHGTITGVDVSMNTHLKTVKMSLKGKNP--VTLDHLSLRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L++D R
Sbjct: 64 NIRYYILPDSLNLETLLVEDTPR 86
>gi|320035592|gb|EFW17533.1| small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
gi|392868800|gb|EAS34594.2| small nuclear ribonucleoprotein [Coccidioides immitis RS]
Length = 125
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L + D ++N+ L ++ T P+ +
Sbjct: 1 MLPLGLLNASQGHPMLVELKNGETLNGHLVNCDSWMNLTLKEVVQTSPEGD-RFFRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVD 81
++RG+ ++++++P + V+
Sbjct: 60 YVRGNNIKFLRVPEEVVE 77
>gi|56753107|gb|AAW24763.1| SJCHGC05980 protein [Schistosoma japonicum]
Length = 207
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 1 MERLLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKL-TDISVTDP--DKYPHM 57
++ L F +L+G+ + V L ++ I G L S D +NI+L + + + +P D+
Sbjct: 19 LQSSLIAIFPAALIGEPITVTLLDETRITGRLCSCDGMMNIQLDSGVIIRNPNSDRLNEF 78
Query: 58 LSVKNCFIRGSVVRYVQLP 76
+ V+ I G +RYV +P
Sbjct: 79 IQVETIMIFGQRIRYVTVP 97
>gi|149626991|ref|XP_001507555.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D1-like
[Ornithorhynchus anatinus]
Length = 125
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTD----PDKYPHMLSVKNCF 64
F L + V +ELKN + G + VD +N L ++ + + K P+ + + +
Sbjct: 6 FLMKLANESVTIELKNGTVLTGIVLGVDISMNTHLKNVKIVNKTKAASKGPNFILLDHLT 65
Query: 65 IRGSVVRYVQLPGD-EVDTQLLQDATRKEAVNA 96
IRG+ +RY L +DT L+ D +++ A
Sbjct: 66 IRGNSIRYFILSDSLPLDTLLIDDTPKQKPSRA 98
>gi|340710821|ref|XP_003393982.1| PREDICTED: 5'-nucleotidase domain-containing protein 1-like
[Bombus terrestris]
Length = 563
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 2 ERLLFYS----FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYP 55
ER +++ K++ + ++L+N+ S+ G + D Y+NI + D TDP D Y
Sbjct: 8 ERYFYFNTLAILLKAVQNERTTIDLRNEASVYGIVEHTDAYMNIVMRDCIFTDPRGDSYS 67
Query: 56 HMLSVKNCFIRGSVVRYVQLP 76
+ + F++ +R+V +P
Sbjct: 68 YDM----FFVQARNIRFVHIP 84
>gi|29841078|gb|AAP06091.1| hypothetical protein [Schistosoma japonicum]
Length = 183
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 5 LFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKL-TDISVTDP--DKYPHMLSVK 61
L F +L+G+ + V L ++ I G L S D +NI+L + + + +P D+ + V+
Sbjct: 23 LIAIFPAALIGEPITVTLLDETRITGRLCSCDGMMNIQLDSGVIIRNPNSDRLNEFIQVE 82
Query: 62 NCFIRGSVVRYVQLP 76
I G +RYV +P
Sbjct: 83 TIMIFGQRIRYVTVP 97
>gi|116784296|gb|ABK23291.1| unknown [Picea sitchensis]
Length = 114
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVNIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKSP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L++D +
Sbjct: 64 NIRYYILPDSLNLETLLVEDTPK 86
>gi|449304089|gb|EMD00097.1| hypothetical protein BAUCODRAFT_30555 [Baudoinia compniacensis
UAMH 10762]
Length = 130
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELK + GT+ SV +N L +T K +S+ IRGS
Sbjct: 6 FLMKCTNETVTIELKTGAIVHGTIASVSPQMNTNLRAAKMT--PKGGSQISLDQISIRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRKE 92
+RY LP +DT L+ DA + +
Sbjct: 64 EIRYFILPDSLPLDTLLIDDAPKPK 88
>gi|388509846|gb|AFK42989.1| unknown [Lotus japonicus]
Length = 116
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T K P +++ + +RG+
Sbjct: 6 FLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNP--VTLDHLSVRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP ++T L+++ R
Sbjct: 64 NIRYYILPDSLNLETLLVEETPR 86
>gi|331225531|ref|XP_003325436.1| U6 snRNA-associated Sm-like protein LSm3 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
gi|309304426|gb|EFP81017.1| U6 snRNA-associated Sm-like protein LSm3 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
Length = 97
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 7 YSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDI--------SVTDPDKYPHML 58
+ + + + V+++L+ D + GTLH+ D ++N+ L+D+ +PD P +
Sbjct: 13 FDLIRLSLSERVLIKLRGDRVLNGTLHAYDGHMNMVLSDVIETITVVEPAANPDDEPIIR 72
Query: 59 SVK-NC---FIRGSVVRYVQLPG 77
+VK NC F+RG V V P
Sbjct: 73 TVKRNCEMLFVRGDGVVLVAPPA 95
>gi|452978143|gb|EME77907.1| hypothetical protein MYCFIDRAFT_57424 [Pseudocercospora fijiensis
CIRAD86]
Length = 129
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F + V +ELK + GT+ SV +N L + +T K +S+ + +RGS
Sbjct: 6 FLMKCTNETVTIELKTGTIVQGTIASVSPQMNTNLRNAKMT--PKGGSQISLDHISVRGS 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATR 90
+RY LP +DT L+ DA +
Sbjct: 64 EIRYYILPDSLPLDTLLIDDAPK 86
>gi|367045678|ref|XP_003653219.1| hypothetical protein THITE_2115403 [Thielavia terrestris NRRL
8126]
gi|347000481|gb|AEO66883.1| hypothetical protein THITE_2115403 [Thielavia terrestris NRRL
8126]
Length = 127
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 63
+L + G ++VELKN ++ G L D ++N+ L ++ T P+ + +
Sbjct: 1 MLPLGLLNAAQGHPMLVELKNGETLNGHLVLCDTWMNLTLREVVQTSPEG-DRFMRLPEV 59
Query: 64 FIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P + +D
Sbjct: 60 YVKGNNIKYLRVPDEIID 77
>gi|198437112|ref|XP_002129287.1| PREDICTED: similar to AGAP007246-PA isoform 1 [Ciona
intestinalis]
gi|198437114|ref|XP_002129303.1| PREDICTED: similar to AGAP007246-PA isoform 2 [Ciona
intestinalis]
Length = 121
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + +T ++ P +++ IRG+
Sbjct: 6 FLMKLSHETVTIELKNGTQVHGTITGVDICMNTHLKSVKMTVKNRDP--VNLDTLSIRGN 63
Query: 69 VVRYVQLPGD-EVDTQLLQDATRK 91
+RY LP +DT L+ + ++
Sbjct: 64 NIRYYILPDSLPLDTLLVDEGPKQ 87
>gi|156034609|ref|XP_001585723.1| hypothetical protein SS1G_13239 [Sclerotinia sclerotiorum 1980]
gi|154698643|gb|EDN98381.1| hypothetical protein SS1G_13239 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 122
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 4 LLFYSFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYPHMLSVK 61
+L + G ++VELK+ ++ G L S D ++N+ L ++ T P DK+ + +
Sbjct: 2 VLPLGLLTAAQGHPMLVELKDGETLNGHLVSCDTWMNLTLKEVVQTSPDGDKFTRLPEI- 60
Query: 62 NCFIRGSVVRYVQLPGDEVD 81
+++G+ ++Y+++P + +D
Sbjct: 61 --YVKGNNIKYLRMPDEIID 78
>gi|58264244|ref|XP_569278.1| pre-mRNA splicing factor [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107716|ref|XP_777469.1| hypothetical protein CNBB0430 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321248376|ref|XP_003191109.1| pre-mRNA splicing factor [Cryptococcus gattii WM276]
gi|50260161|gb|EAL22822.1| hypothetical protein CNBB0430 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223928|gb|AAW41971.1| pre-mRNA splicing factor, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317457576|gb|ADV19322.1| pre-mRNA splicing factor, putative [Cryptococcus gattii WM276]
gi|405118776|gb|AFR93550.1| pre-mRNA splicing factor [Cryptococcus neoformans var. grubii
H99]
Length = 124
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 14 VGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRYV 73
+G + VELK G L + LNI L +I+VT D L + +IRGS++R++
Sbjct: 15 LGHIITVELKTGEMYRGKLMEAEDTLNIALREITVTARDGRVSQL--EQVYIRGSMIRFI 72
Query: 74 QLP 76
+P
Sbjct: 73 IVP 75
>gi|350427431|ref|XP_003494756.1| PREDICTED: 5'-nucleotidase domain-containing protein 1-like [Bombus
impatiens]
Length = 626
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 2 ERLLFYS----FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDP--DKYP 55
ER +++ K++ + ++L+N+ S+ G + D Y+NI + D TDP D Y
Sbjct: 71 ERYFYFNTLAILLKAVQNERTTIDLRNEASVYGIVEHTDAYMNIVMRDCIFTDPRGDSY- 129
Query: 56 HMLSVKNCFIRGSVVRYVQLP 76
S F++ +R+V +P
Sbjct: 130 ---SYDMFFVQARNIRFVHIP 147
>gi|307111075|gb|EFN59310.1| hypothetical protein CHLNCDRAFT_29459 [Chlorella variabilis]
Length = 115
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 9 FFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 68
F L + V +ELKN + GT+ VD +N L + + + P ++V IRG+
Sbjct: 7 FLMKLANEKVQIELKNGTVVYGTITGVDVAMNTHLKTVKLVPKGQNP--ITVAQMSIRGN 64
Query: 69 VVRYVQLP 76
+RY LP
Sbjct: 65 NIRYYILP 72
>gi|268564648|ref|XP_002639176.1| Hypothetical protein CBG03715 [Caenorhabditis briggsae]
Length = 137
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 2 ERLLFY--SFFKSLVGKDVVVELKNDVSICGTLHSVDQYLNIKLTDISV---TDPDKYPH 56
ERLL S + + GK+V VEL+ D + G L D LNI+L +++V + K P
Sbjct: 25 ERLLAGCGSVLQGMAGKNVAVELRGDNYVIGELVDCDSDLNIQLKNVTVIRDSQETKEPV 84
Query: 57 MLSVKNCFIRGSVVRYVQLPGDEVDTQ--LLQDATRKEAVNATR 98
++ G +R+V D+V+ Q + + A AVN R
Sbjct: 85 Y------YVTGKFIRFVHFK-DQVNVQAAIKRCARGDRAVNGNR 121
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,415,613,389
Number of Sequences: 23463169
Number of extensions: 48914088
Number of successful extensions: 109642
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 932
Number of HSP's that attempted gapping in prelim test: 108667
Number of HSP's gapped (non-prelim): 1419
length of query: 98
length of database: 8,064,228,071
effective HSP length: 67
effective length of query: 31
effective length of database: 6,492,195,748
effective search space: 201258068188
effective search space used: 201258068188
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)