BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6030
(118 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|110671516|gb|ABG82009.1| putative ribosomal protein L28 [Diaphorina citri]
Length = 141
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/73 (100%), Positives = 73/73 (100%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN
Sbjct: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
Query: 61 KGFACVTKRATKK 73
KGFACVTKRATKK
Sbjct: 61 KGFACVTKRATKK 73
>gi|91078314|ref|XP_972745.1| PREDICTED: similar to ribosomal protein L28e [Tribolium
castaneum]
gi|270003956|gb|EFA00404.1| hypothetical protein TcasGA2_TC003255 [Tribolium castaneum]
Length = 137
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL+W+I++NNNA+L K NI K FS EP NL NL+S++Y+GLIH KT+ I D K
Sbjct: 1 MSAHLVWSIIRNNNAFLRKKRNIGKPFSTEPNNLTNLSSYRYNGLIHKKTVGIVDAPDKK 60
Query: 62 GFACVTKRATKKPTADNKGFACVTKRATK 90
GF V K+A+K+ NK C+ KR K
Sbjct: 61 GFTVVYKKASKQ----NKPRQCIVKRTMK 85
>gi|70909833|emb|CAJ17403.1| ribosomal protein L28e [Meladema coriacea]
Length = 137
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W I++NNNA+L+K NI K FS EP NLPNL+SF+Y+GLIH KT+ I D K
Sbjct: 1 MSAHLSWMIIRNNNAFLLKKRNINKPFSTEPSNLPNLSSFRYNGLIHKKTVGIIEPKDKK 60
Query: 62 GFACVTKRATKK 73
GF V K+A K+
Sbjct: 61 GFTVVYKKANKQ 72
>gi|121543829|gb|ABM55579.1| ribosomal protein L28-like protein [Maconellicoccus hirsutus]
Length = 139
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W I +NNNAYL+K +IKK FS EPGNL N+ASF+Y+GL+ KT+ ++ D K
Sbjct: 1 MSADLYWMITRNNNAYLLKKRDIKKPFSTEPGNLKNVASFRYNGLVQPKTVDVRAAKDGK 60
Query: 62 GFACVTKRATK--KPTADN 78
GF TKRA + KP N
Sbjct: 61 GFVVTTKRAKQQNKPGKSN 79
>gi|340728565|ref|XP_003402591.1| PREDICTED: 60S ribosomal protein L28-like isoform 1 [Bombus
terrestris]
gi|340728567|ref|XP_003402592.1| PREDICTED: 60S ribosomal protein L28-like isoform 2 [Bombus
terrestris]
gi|340728569|ref|XP_003402593.1| PREDICTED: 60S ribosomal protein L28-like isoform 3 [Bombus
terrestris]
gi|350408755|ref|XP_003488502.1| PREDICTED: 60S ribosomal protein L28-like [Bombus impatiens]
Length = 138
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 58/92 (63%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NNNA+L+K NI K FS EP NL NL+S++YSGLIH K++ + TAD K
Sbjct: 1 MSSHLNWMIIRNNNAFLLKKRNINKPFSTEPNNLNNLSSYRYSGLIHRKSVGVVDTADKK 60
Query: 62 GFACVTKRATKKPTADNKGFACVTKRATKKTL 93
GF V K+A C K +++L
Sbjct: 61 GFTVVYKKAKAMNKPAKATVRCTMKAGARRSL 92
>gi|195402986|ref|XP_002060078.1| GJ15527 [Drosophila virilis]
gi|194141876|gb|EDW58289.1| GJ15527 [Drosophila virilis]
Length = 144
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 51/67 (76%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
SSHL W I++NNNA+L+K ++KK FS EP NL N++SF+YSG++H KT+ + P AD KG
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPSNLANVSSFRYSGIVHKKTLGVVPAADKKG 63
Query: 63 FACVTKR 69
F V K+
Sbjct: 64 FTAVLKK 70
>gi|264667459|gb|ACY71315.1| ribosomal protein L28 [Chrysomela tremula]
Length = 144
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 59/89 (66%), Gaps = 4/89 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL+W I++NNNA+L+K NI K FS EP NL NL+S++Y+GLIH K++ I D K
Sbjct: 1 MSSHLVWGIIRNNNAFLLKKRNISKPFSTEPNNLTNLSSYRYNGLIHKKSVGIVDAPDKK 60
Query: 62 GFACVTKRATKKPTADNKGFACVTKRATK 90
GF V K+++K+ NK KR K
Sbjct: 61 GFTVVYKKSSKQ----NKPRQTTVKRTMK 85
>gi|383866123|ref|XP_003708521.1| PREDICTED: 60S ribosomal protein L28-like [Megachile rotundata]
Length = 138
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NNNA+L+K NI K FS EP NL NL+S++YSGLIH K++ + T D K
Sbjct: 1 MSSHLNWMIIRNNNAFLLKKRNISKPFSTEPNNLTNLSSYRYSGLIHRKSVGVIDTPDKK 60
Query: 62 GFACVTK--RATKKPTADNKGFACVTKRATKKTL 93
GF V K R+ KKP C K +++L
Sbjct: 61 GFTVVYKKPRSIKKPAKST--VRCTMKAGARRSL 92
>gi|357616700|gb|EHJ70349.1| ribosomal protein L28 [Danaus plexippus]
Length = 139
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NNNA+L+K NIKK FSKEP N+ NL SFKY+GLIH K + + D K
Sbjct: 1 MSSHLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLNSFKYNGLIHKKAVGVVENPDRK 60
Query: 62 GFACVTK--RATKKPTAD 77
GF+ V K +AT KP +
Sbjct: 61 GFSVVYKKAKATNKPAKN 78
>gi|195125314|ref|XP_002007124.1| GI12761 [Drosophila mojavensis]
gi|193918733|gb|EDW17600.1| GI12761 [Drosophila mojavensis]
Length = 144
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 51/67 (76%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
SSHL W I++NNNA+L+K ++KK FS EP NL N++S++YSG++H KT+ + P AD KG
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLANVSSYRYSGIVHKKTVGVVPAADKKG 63
Query: 63 FACVTKR 69
F V K+
Sbjct: 64 FTTVLKK 70
>gi|49532850|dbj|BAD26660.1| Ribosomal protein L28 [Plutella xylostella]
Length = 139
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 4/89 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NNNA+++K +IKK FSKEP N+ NL+S++Y+GLIH K + + D K
Sbjct: 1 MSSHLNWMIIRNNNAFIVKKRDIKKPFSKEPNNVTNLSSYRYNGLIHKKAVGVVENPDRK 60
Query: 62 GFACVTKRATKKPTADNKGFACVTKRATK 90
GF VTK+A A NK + +R+ K
Sbjct: 61 GFTVVTKKA----KATNKPVKNIVRRSFK 85
>gi|194748789|ref|XP_001956827.1| GF24379 [Drosophila ananassae]
gi|190624109|gb|EDV39633.1| GF24379 [Drosophila ananassae]
Length = 144
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 52/67 (77%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
SSHL W I++NNNA+L+K ++KK FS EP NL +++S++YSG++H KT+ + PTAD KG
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPTADKKG 63
Query: 63 FACVTKR 69
F V K+
Sbjct: 64 FTAVLKK 70
>gi|156536870|ref|XP_001604901.1| PREDICTED: 60S ribosomal protein L28-like [Nasonia vitripennis]
Length = 138
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NNNA+L+K NI K FS EP NL NL+S++YSGL+H K++ + T D K
Sbjct: 1 MSSHLNWMIIRNNNAFLLKKRNISKPFSTEPNNLTNLSSYRYSGLVHRKSVGVVDTPDKK 60
Query: 62 GFACVTKRA 70
GF V K+A
Sbjct: 61 GFTVVYKKA 69
>gi|70909829|emb|CAJ17401.1| ribosomal protein L28e [Carabus granulatus]
Length = 137
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 51/72 (70%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W I++NNNA+L+K NI K FS EP NL NL SF+Y+GLIH KT+ I D K
Sbjct: 1 MSAHLSWMIIRNNNAFLLKKRNISKPFSTEPSNLTNLNSFRYNGLIHKKTVGIVEPKDKK 60
Query: 62 GFACVTKRATKK 73
GF V K+A K+
Sbjct: 61 GFTVVYKKANKQ 72
>gi|342356461|gb|AEL28889.1| ribosomal protein L28 [Heliconius melpomene cythera]
Length = 139
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NNNA+L+K NIKK FSKEP N+ NL +F+Y+GLIH K I + D K
Sbjct: 1 MSSHLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLNAFRYNGLIHKKAIGVVENPDRK 60
Query: 62 GFACVTK--RATKKPTAD 77
GF+ V K +AT KP +
Sbjct: 61 GFSVVYKKAKATNKPAKN 78
>gi|332375963|gb|AEE63122.1| unknown [Dendroctonus ponderosae]
Length = 137
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 4/89 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL+W+I++NNNA+L+K NI K FS EP NL NL S++Y+GL+H KT+ I D K
Sbjct: 1 MSSHLVWSIIRNNNAFLVKKRNISKPFSTEPNNLTNLNSYRYNGLVHKKTLAIADGPDRK 60
Query: 62 GFACVTKRATKKPTADNKGFACVTKRATK 90
GF K+A K+ NK + KR K
Sbjct: 61 GFTLTYKKAKKQ----NKPRQNLVKRTFK 85
>gi|268306400|gb|ACY95321.1| ribosomal protein L28 [Manduca sexta]
Length = 139
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NNNA+L+K NIKK FSKEP N+ NL S+KY+GLIH K + + D K
Sbjct: 1 MSSHLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLNSYKYNGLIHKKAVGVVENPDRK 60
Query: 62 GFACVTK--RATKKPTAD 77
GF V K +AT KP +
Sbjct: 61 GFTVVYKKAKATNKPVKN 78
>gi|195428643|ref|XP_002062381.1| GK16691 [Drosophila willistoni]
gi|194158466|gb|EDW73367.1| GK16691 [Drosophila willistoni]
Length = 134
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
SSHL W I++NNNA+L+K ++KK FS EP NL +++S++YSG++H KT+ + P AD KG
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLTSVSSYRYSGVVHKKTVAVVPAADKKG 63
Query: 63 FACVTKR 69
F V K+
Sbjct: 64 FTAVLKK 70
>gi|195011576|ref|XP_001983217.1| GH15706 [Drosophila grimshawi]
gi|193896699|gb|EDV95565.1| GH15706 [Drosophila grimshawi]
Length = 144
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 50/68 (73%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
SSHL W I++NNNA+L+K ++K+ FS EP NL N++SF+YSG++H KT+ I P D KG
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKRPFSTEPNNLTNVSSFRYSGVVHKKTLGIVPAGDKKG 63
Query: 63 FACVTKRA 70
F V ++
Sbjct: 64 FTAVLRKG 71
>gi|380019739|ref|XP_003693760.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L28-like
[Apis florea]
Length = 138
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NNNA+L+K NI K FS E NL NL+S++YSGLIH K++ I T+D K
Sbjct: 1 MSSHLNWMIIRNNNAFLLKKRNINKPFSTESNNLTNLSSYRYSGLIHRKSVGIVDTSDKK 60
Query: 62 GFACVTKRA 70
GF V K+A
Sbjct: 61 GFTVVYKKA 69
>gi|194866026|ref|XP_001971722.1| GG14270 [Drosophila erecta]
gi|195491356|ref|XP_002093528.1| GE20698 [Drosophila yakuba]
gi|190653505|gb|EDV50748.1| GG14270 [Drosophila erecta]
gi|194179629|gb|EDW93240.1| GE20698 [Drosophila yakuba]
Length = 144
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
SSHL W I++NNNA+L+K ++KK FS EP NL +++S++YSG++H KT+ + P AD KG
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 63 FACVTKR 69
F V K+
Sbjct: 64 FTAVLKK 70
>gi|38047791|gb|AAR09798.1| similar to Drosophila melanogaster CG12740, partial [Drosophila
yakuba]
Length = 144
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
SSHL W I++NNNA+L+K ++KK FS EP NL +++S++YSG++H KT+ + P AD KG
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 63 FACVTKR 69
F V K+
Sbjct: 64 FTAVLKK 70
>gi|24656625|ref|NP_647791.2| ribosomal protein L28, isoform A [Drosophila melanogaster]
gi|24656628|ref|NP_728839.1| ribosomal protein L28, isoform B [Drosophila melanogaster]
gi|24656632|ref|NP_728840.1| ribosomal protein L28, isoform D [Drosophila melanogaster]
gi|281365564|ref|NP_001163336.1| ribosomal protein L28, isoform E [Drosophila melanogaster]
gi|281365566|ref|NP_001163337.1| ribosomal protein L28, isoform F [Drosophila melanogaster]
gi|386770474|ref|NP_728841.2| ribosomal protein L28, isoform G [Drosophila melanogaster]
gi|195337099|ref|XP_002035170.1| GM14063 [Drosophila sechellia]
gi|24418652|sp|Q9VZS5.1|RL28_DROME RecName: Full=60S ribosomal protein L28
gi|7292335|gb|AAF47742.1| ribosomal protein L28, isoform B [Drosophila melanogaster]
gi|17946046|gb|AAL49066.1| RE52852p [Drosophila melanogaster]
gi|23092891|gb|AAN11546.1| ribosomal protein L28, isoform A [Drosophila melanogaster]
gi|23092892|gb|AAN11547.1| ribosomal protein L28, isoform D [Drosophila melanogaster]
gi|194128263|gb|EDW50306.1| GM14063 [Drosophila sechellia]
gi|220957664|gb|ACL91375.1| RpL28-PA [synthetic construct]
gi|272455031|gb|ACZ94608.1| ribosomal protein L28, isoform E [Drosophila melanogaster]
gi|272455032|gb|ACZ94609.1| ribosomal protein L28, isoform F [Drosophila melanogaster]
gi|281485638|gb|ADA70410.1| MIP15344p [Drosophila melanogaster]
gi|383291719|gb|AAF47743.2| ribosomal protein L28, isoform G [Drosophila melanogaster]
Length = 144
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
SSHL W I++NNNA+L+K ++KK FS EP NL +++S++YSG++H KT+ + P AD KG
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 63 FACVTKR 69
F V K+
Sbjct: 64 FTAVLKK 70
>gi|66552169|ref|XP_625152.1| PREDICTED: 60S ribosomal protein L28 [Apis mellifera]
Length = 138
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NNNA+L+K NI K FS E NL NL+S++YSGLIH K++ I T+D K
Sbjct: 1 MSSHLNWMIIRNNNAFLLKKRNINKPFSTESNNLTNLSSYRYSGLIHRKSVGIVDTSDKK 60
Query: 62 GFACVTKRATKKPTADNKGFACVTKRATKKTL 93
GF V K+A C K +++L
Sbjct: 61 GFTIVYKKAKAMNKPAKATVRCTMKAGARRSL 92
>gi|125977290|ref|XP_001352678.1| GA11782 [Drosophila pseudoobscura pseudoobscura]
gi|195174386|ref|XP_002027956.1| GL21281 [Drosophila persimilis]
gi|54641427|gb|EAL30177.1| GA11782 [Drosophila pseudoobscura pseudoobscura]
gi|194115666|gb|EDW37709.1| GL21281 [Drosophila persimilis]
Length = 144
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
SSHL W I++NNNA+L+K ++ K FS EP NL +++S++YSG++H KT+ + PTAD K
Sbjct: 3 TSSHLNWLIIRNNNAFLLKKRDVNKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPTADKK 62
Query: 62 GFACVTKRA 70
GF V K+
Sbjct: 63 GFTAVLKKG 71
>gi|195587425|ref|XP_002083465.1| GD13338 [Drosophila simulans]
gi|194195474|gb|EDX09050.1| GD13338 [Drosophila simulans]
Length = 144
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
SSHL W I++NNNA+L+K ++KK FS EP NL +++S++YSG++H KT+ + P AD KG
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 63 FACVTKR 69
F V K+
Sbjct: 64 FTAVLKK 70
>gi|112984200|ref|NP_001037237.1| ribosomal protein L28 [Bombyx mori]
gi|54609249|gb|AAV34840.1| ribosomal protein L28 [Bombyx mori]
Length = 139
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W I++NNNA+L+K NIKK FSKEP N+ NL SF+Y+GLIH K + + D K
Sbjct: 1 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 60
Query: 62 GFACVTK--RATKKPTAD 77
GF V K +AT+KP +
Sbjct: 61 GFTVVYKKAKATRKPAKN 78
>gi|20976820|gb|AAM27485.1| GH04183p [Drosophila melanogaster]
gi|220959846|gb|ACL92466.1| RpL28-PA [synthetic construct]
Length = 236
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
SSHL W I++NNNA+L+K ++KK FS EP NL +++S++YSG++H KT+ + P AD KG
Sbjct: 96 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 155
Query: 63 FACVTKRA 70
F V K+
Sbjct: 156 FTAVLKKG 163
>gi|307207541|gb|EFN85228.1| 60S ribosomal protein L28 [Harpegnathos saltator]
Length = 138
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NNNA+L+K NI K FS E NL NL+S++YSGLIH K++ + T D K
Sbjct: 1 MSSHLNWMIIRNNNAFLLKKRNINKPFSTESNNLTNLSSYRYSGLIHRKSVGVVDTPDKK 60
Query: 62 GFACVTKRA 70
GF V K+A
Sbjct: 61 GFTVVYKKA 69
>gi|389610797|dbj|BAM19009.1| ribosomal protein L28 [Papilio polytes]
Length = 139
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NN+A+L+K NIKK FSKEP N+ NL S++Y+GLIH K + + D K
Sbjct: 1 MSSHLNWMIIRNNSAFLVKKRNIKKPFSKEPNNVTNLNSYRYNGLIHKKAVSVVENPDRK 60
Query: 62 GFACVTK--RATKKPTAD 77
GF V K +AT KP +
Sbjct: 61 GFTVVYKKAKATHKPVKN 78
>gi|389608651|dbj|BAM17935.1| ribosomal protein L28 [Papilio xuthus]
Length = 139
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NN+A+L+K NIKK FSKEP N+ NL S++Y+GLIH K + + D K
Sbjct: 1 MSSHLNWMIIRNNSAFLVKKRNIKKPFSKEPNNVTNLNSYRYNGLIHKKAVSVVENPDRK 60
Query: 62 GFACVTK--RATKKPTAD 77
GF V K +AT KP +
Sbjct: 61 GFTVVYKKAKATHKPAKN 78
>gi|24418650|sp|Q962T2.1|RL28_SPOFR RecName: Full=60S ribosomal protein L28
gi|15213778|gb|AAK92164.1|AF400192_1 ribosomal protein L28 [Spodoptera frugiperda]
Length = 139
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NNNA+L+K NIKK FSKEP N+ NL S++Y+GLI K + + D K
Sbjct: 1 MSSHLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLNSYRYNGLIQKKAVGVVENPDRK 60
Query: 62 GFACVTK--RATKKPTAD 77
GF V K +AT KP +
Sbjct: 61 GFTVVYKKAKATNKPAKN 78
>gi|62083337|gb|AAX62393.1| ribosomal protein L28 [Lysiphlebus testaceipes]
Length = 137
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 4 SHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGF 63
S L W I++NNNA+L+K NI K FS E NL NL+S++YSGL+HSKT+ + T D KGF
Sbjct: 2 SALNWMIIRNNNAFLLKKRNINKPFSTEANNLTNLSSYRYSGLVHSKTVGVVDTPDKKGF 61
Query: 64 ACVTKRATKKPTADNKGFACVTKRATK 90
V TKKP K + KR K
Sbjct: 62 TVV----TKKPKCGKKPAKALEKRTMK 84
>gi|158294176|ref|XP_315433.4| AGAP005427-PA [Anopheles gambiae str. PEST]
gi|157015443|gb|EAA10888.5| AGAP005427-PA [Anopheles gambiae str. PEST]
Length = 157
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M SSHL W IV+++NA+L+K +I+K FS EPGNL NL+SF+YSGL+H KTI I P A+
Sbjct: 1 MASSHLNWLIVRDHNAFLLKRRDIRKPFSTEPGNLTNLSSFRYSGLVHHKTITITP-AEK 59
Query: 61 KGFACVTKR 69
KG V R
Sbjct: 60 KGVNFVYNR 68
>gi|315115473|gb|ADT80709.1| ribosomal protein L28 [Euphydryas aurinia]
Length = 139
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NNNA+L+K NIKK FSKEP N+ NL +++Y+GLIH K I + + K
Sbjct: 1 MSSHLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLNAYRYNGLIHKKAIGVVENPNRK 60
Query: 62 GFACVTK--RATKKPTAD 77
GF V K +AT KP +
Sbjct: 61 GFTVVYKKAKATNKPAKN 78
>gi|56462370|gb|AAV91468.1| ribosomal protein 30 [Lonomia obliqua]
Length = 139
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NN+A+++K NIKK FSKEP N+ NL S++Y+GLIH K + + D K
Sbjct: 1 MSSHLNWMIIRNNSAFIVKKRNIKKPFSKEPNNVTNLNSYRYNGLIHKKAVGVVENPDRK 60
Query: 62 GFACVTK--RATKKPTAD 77
GF V K +AT KP +
Sbjct: 61 GFTVVYKKAKATNKPVKN 78
>gi|70909831|emb|CAJ17402.1| ribosomal protein L28e [Eucinetus sp. APV-2005]
Length = 140
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+ SHL+W+I++NNNA+L+K NI K FS E NL NLASF+Y+GLIH K++ + K
Sbjct: 1 MPSHLVWSIIRNNNAFLLKKRNISKPFSTEANNLTNLASFRYNGLIHKKSVGVIDGPSRK 60
Query: 62 GFACVTKRATKK 73
GF V K+A ++
Sbjct: 61 GFTVVYKKAKRQ 72
>gi|307173987|gb|EFN64705.1| 60S ribosomal protein L28 [Camponotus floridanus]
Length = 138
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I+++NNA+L+K NIKK FS E NL N +S++YSG+IH K++ I T D K
Sbjct: 1 MSSHLNWMIIRDNNAFLLKKRNIKKPFSTESNNLTNQSSYRYSGVIHRKSVGIVDTPDKK 60
Query: 62 GFACVTKRA 70
GF V K+A
Sbjct: 61 GFTVVYKKA 69
>gi|312383906|gb|EFR28794.1| hypothetical protein AND_02798 [Anopheles darlingi]
Length = 158
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
MVSSHL W I++++NA+L+K NI+K FS EP NL NL+S++YSGL+H +T+ + P A+
Sbjct: 1 MVSSHLSWLIIRDHNAHLLKQKNIRKPFSTEPNNLTNLSSYRYSGLVHRRTVGVTP-AEK 59
Query: 61 KGFACVTKR 69
KG KR
Sbjct: 60 KGIVFTYKR 68
>gi|70909835|emb|CAJ17404.1| ribosomal protein L28e [Sphaerius sp. APV-2005]
Length = 138
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W IV+NNNA+L+K NI K FS EP NL NL+S++YSG++ + + ++ D
Sbjct: 1 MSSHLNWLIVRNNNAFLLKKRNINKPFSMEPNNLKNLSSYRYSGIVRKRVVGVEEPKDKN 60
Query: 62 GFACVTKRA 70
GF VTK++
Sbjct: 61 GFVLVTKKS 69
>gi|332026623|gb|EGI66732.1| 60S ribosomal protein L28 [Acromyrmex echinatior]
Length = 114
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I+++NNA+L+K NI K FS E NL NL+S++YSGLIH K++ + T D K
Sbjct: 1 MSSHLNWMIIRDNNAFLLKKRNINKPFSTEANNLTNLSSYRYSGLIHRKSVGVIDTPDKK 60
Query: 62 GFACVTKRA 70
GF V K+A
Sbjct: 61 GFTVVYKKA 69
>gi|242020790|ref|XP_002430834.1| 60S ribosomal protein L28, putative [Pediculus humanus corporis]
gi|212516037|gb|EEB18096.1| 60S ribosomal protein L28, putative [Pediculus humanus corporis]
Length = 139
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQ--PTAD 59
+SSHL W I++NNNA+L+K NIKK FSKEP NL NL SF+Y+G+IH K + I+ +
Sbjct: 1 MSSHLNWMIIRNNNAFLVKKTNIKKPFSKEPNNLTNLNSFRYNGIIHKKCVGIEGGKAPE 60
Query: 60 NKGFACVTKRA 70
KGF + K+A
Sbjct: 61 KKGFTVIMKKA 71
>gi|111379895|gb|ABH09427.1| ribosomal protein L28 [Triatoma brasiliensis]
Length = 138
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W I++N N+YL+K NIKK FS EP NL NLASF+Y+GL+H K+I I P
Sbjct: 1 MSAHLSWMIIRNTNSYLVKKRNIKKHFSTEPHNLLNLASFRYNGLVHKKSIDISPADSLH 60
Query: 62 GFACVTKRATKKPTADNKGFACVTKRATK 90
GF K KK A +K +C R K
Sbjct: 61 GF----KLTWKKSKAAHKPGSCYVSRTMK 85
>gi|389032519|gb|AFK82396.1| ribosomal protein L28e [Ctenocephalides felis]
Length = 136
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W IV+NNNA+L K NI K FS EP NL NL+SF+Y+G +H KT+ + P AD
Sbjct: 1 MSAHLSWMIVRNNNAFLKKKRNINKPFSSEPNNLTNLSSFRYNGFVHKKTVGVVP-ADKG 59
Query: 62 GFACVTKRATKKPTADNKGFACVTKRATK 90
GF V KKP ++ KR K
Sbjct: 60 GFTVV----YKKPKCQHRPAKATVKRTMK 84
>gi|342905877|gb|AEL79222.1| ribosomal protein L28 [Rhodnius prolixus]
Length = 90
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W I++N N+YL+K NIKK FS EP NL NLASF+Y+GL+H K++ I P
Sbjct: 1 MSAHLSWMIIRNTNSYLVKKRNIKKHFSTEPHNLLNLASFRYNGLVHKKSVDISPADSLH 60
Query: 62 GFACVTKRATKKPTADNKGFACVTKRATK 90
GF K+A A +K +C R K
Sbjct: 61 GFKLTWKKA----KAAHKPGSCYVSRTMK 85
>gi|116833191|gb|ABK29508.1| ribosomal protein L28 [Helicoverpa armigera]
Length = 80
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W I++NN+A+L+K NIKK FSKEP N+ NL S++Y+GLI K + + D K
Sbjct: 1 MSSHLNWMIIRNNHAFLVKKRNIKKPFSKEPNNVTNLNSYRYNGLIQKKAVGVVENPDRK 60
Query: 62 GFACVTK--RATKKPTAD 77
GF V K +AT KP +
Sbjct: 61 GFTVVYKKAKATNKPVKN 78
>gi|355428278|gb|AER92455.1| hypothetical protein [Triatoma rubida]
Length = 138
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W I++N N+YL+K NIKK FS EP NL NLASF+Y+GL+H K+ I P
Sbjct: 1 MSAHLSWMIIRNTNSYLVKKRNIKKHFSTEPHNLLNLASFRYNGLVHKKSTDISPADSLH 60
Query: 62 GFACVTKRATKKPTADNKGFACVTKRATK 90
GF K+A A +K +C R K
Sbjct: 61 GFKLTWKKA----KAAHKPGSCYVSRTMK 85
>gi|240849585|ref|NP_001155658.1| ribosomal protein L28 [Acyrthosiphon pisum]
gi|239790506|dbj|BAH71810.1| ACYPI006342 [Acyrthosiphon pisum]
Length = 141
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 50/68 (73%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W I++N+NA+L K NIKK FSKEP NL NLAS +Y+GL+H +I ++ +NK
Sbjct: 1 MSADLSWMIIRNSNAFLSKKTNIKKPFSKEPMNLTNLASKRYNGLVHDNSIGVESAPNNK 60
Query: 62 GFACVTKR 69
GF +TK+
Sbjct: 61 GFTVITKK 68
>gi|170044970|ref|XP_001850099.1| ribosomal protein L28 [Culex quinquefasciatus]
gi|167868043|gb|EDS31426.1| ribosomal protein L28 [Culex quinquefasciatus]
Length = 157
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
SSHL W I++++NA+L+K NI+K FS EP NL NL+SF+YSGL+H K++ I P +KG
Sbjct: 5 SSHLNWLIIRDHNAFLLKRRNIRKPFSTEPNNLTNLSSFRYSGLVHKKSLGIVPA--DKG 62
Query: 63 FACVTKR 69
+ V KR
Sbjct: 63 ISVVYKR 69
>gi|157118570|ref|XP_001653203.1| ribosomal protein L28, putative [Aedes aegypti]
gi|157118572|ref|XP_001653204.1| ribosomal protein L28, putative [Aedes aegypti]
gi|94468574|gb|ABF18136.1| ribosomal protein L28 [Aedes aegypti]
gi|108875657|gb|EAT39882.1| AAEL008353-PB [Aedes aegypti]
gi|108875658|gb|EAT39883.1| AAEL008353-PA [Aedes aegypti]
Length = 152
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
SSHL W I++++NA+L+K NIKK FS EP NL NL+S++YSGL+H K++ + P +KG
Sbjct: 5 SSHLSWLIIRDHNAFLLKRRNIKKPFSTEPNNLTNLSSYRYSGLVHKKSLGVVPA--DKG 62
Query: 63 FACVTKR---ATKKPTADNKGFACVTKRATKKTLSGHVDIGSARMDAR 107
V KR TK A K R T K L V+ R D R
Sbjct: 63 IQVVYKRPKFQTKPAKATVKVTLKHRPRRTLKKLKNIVNKNRYRRDLR 110
>gi|188572447|gb|ACD65130.1| putative 60S ribosomal protein RPL28 [Novocrania anomala]
Length = 135
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 63/96 (65%), Gaps = 8/96 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W I++NN+++L+K + K+ S+EP NL SF+Y+GL+H KTI ++P AD K
Sbjct: 1 MSAALQWMIIRNNSSFLLKGN--KQTLSREPNNLKGRNSFRYNGLVHQKTIGVEPCADGK 58
Query: 62 GFACVTKRAT--KKPTADNKGFACVT-KRATKKTLS 94
G VT+++T +KP K F KR ++++L+
Sbjct: 59 GVVLVTRKSTGWRKPV---KAFTRTELKRGSRRSLN 91
>gi|242217363|ref|XP_002474482.1| 60S ribosomal protein L28 [Postia placenta Mad-698-R]
gi|220726397|gb|EED80348.1| 60S ribosomal protein L28 [Postia placenta Mad-698-R]
Length = 141
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W +++NNNA+++K FSKEPGNL NL SFKYSGL +SK I ++PT
Sbjct: 1 MSNDLQWLLLRNNNAFMVKKVQEGPVFSKEPGNLTNLHSFKYSGLANSKVIDVRPTEG-- 58
Query: 62 GFACVTKRATKKPTADNKGFACVTKR 87
G T++ P + + GFA T R
Sbjct: 59 GVEIATRKKDASPHSVSSGFAKTTIR 84
>gi|388856173|emb|CCF50164.1| related to 60S ribosomal protein L28 [Ustilago hordei]
Length = 153
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S L W +V+NN+++++K + + FS+EP NL L S+KYSGL++SK + I+P
Sbjct: 1 MASQDLQWLLVRNNSSFIVKQKGLGRIFSREPRNLTQLHSYKYSGLVNSKAVGIEPAQSG 60
Query: 61 KGFACVTKRATKKP 74
KG TK + K P
Sbjct: 61 KGVVLTTKNSKKTP 74
>gi|392875366|gb|AFM86515.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
Length = 137
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 7/111 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W +++N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSSHLQWMVIRNCSSFLIKRN--KQVYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKR--ATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
G V K+ +KPT + V K RAT +L + + R+D R+
Sbjct: 59 GIVVVLKKRAGQRKPTTSYERI-TVNKNARATLNSLRHIIRKNNYRLDLRM 108
>gi|237862654|gb|ACR24952.1| ribosomal protein L28 [Lepidochitona cinerea]
Length = 128
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 62/96 (64%), Gaps = 8/96 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W I++NN+++L+K K+ FS+EP NL N SF+++GL++ KT+ ++P D K
Sbjct: 1 MSADLQWMIIRNNSSFLLKGS--KQTFSREPNNLKNRNSFRFNGLVNRKTVGVEPAKDGK 58
Query: 62 GFACVTK--RATKKPTADNKGFACVT-KRATKKTLS 94
G VT+ R +KP NK F V K+ ++TL+
Sbjct: 59 GVVMVTRNSRGWRKP---NKNFTRVELKKGGRRTLA 91
>gi|426390260|ref|XP_004061524.1| PREDICTED: 60S ribosomal protein L28 isoform 3 [Gorilla gorilla
gorilla]
Length = 170
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 5/120 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP-TADNKGFACVTKRATKKTLSGHVDIGSARMDARLYIFEMGLMSA 118
G V KR + +KP T+ + RAT ++ + R D R+ + +G A
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTVNKNARATLSSIRHMIRKNKYRPDLRMLVGRVGRQQA 118
>gi|242210411|ref|XP_002471048.1| predicted protein [Postia placenta Mad-698-R]
gi|220729838|gb|EED83705.1| predicted protein [Postia placenta Mad-698-R]
Length = 141
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W +++NNNA+++K FS+EPGNL NL SFKYSGL +SK I ++PT
Sbjct: 1 MSNDLQWLLLRNNNAFMVKKVQEGPVFSREPGNLTNLHSFKYSGLANSKVIDVRPTEG-- 58
Query: 62 GFACVTKRATKKPTADNKGFACVTKR 87
G T++ P + + GFA T R
Sbjct: 59 GVEIATRKKDASPHSVSSGFAKTTIR 84
>gi|392875356|gb|AFM86510.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
Length = 137
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W +++N +++L+K + K+ +S EP NL +SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSSHLQWMVIRNCSSFLIKRN--KQVYSTEPNNLKARSSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
G V KRA ++ A + V K RAT +L + + R D R+
Sbjct: 59 GIVVVLKKRAGQRKPATSYEKITVNKNARATLNSLRHIIRKNNYRRDLRM 108
>gi|392875080|gb|AFM86372.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
Length = 137
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W +++N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSSHLQWMVIRNCSSFLIKRN--KRVYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
G V KRA ++ A + V K RAT +L + + R D R+
Sbjct: 59 GIVVVLKKRAGQRKPATSYEKITVNKNARATLNSLRHIIRKNNYRRDLRM 108
>gi|392874584|gb|AFM86124.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
Length = 137
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W +++N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSSHLQWMVIRNCSSFLIKRN--KQVYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
G V KRA ++ A + V K RAT +L + + R D R+
Sbjct: 59 GIVVVLKKRAGQRKPATSYEKITVNKYARATLNSLRHIIRKNNYRRDLRM 108
>gi|441626596|ref|XP_004089174.1| PREDICTED: 60S ribosomal protein L28 [Nomascus leucogenys]
Length = 194
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 5/120 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKR--ATKKP-TADNKGFACVTKRATKKTLSGHVDIGSARMDARLYIFEMGLMSA 118
G V KR +KP T+ + RAT ++ + R D R+ + ++G A
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMLVGKVGRQQA 118
>gi|392874176|gb|AFM85920.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392874294|gb|AFM85979.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392874370|gb|AFM86017.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392874572|gb|AFM86118.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392875322|gb|AFM86493.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392875422|gb|AFM86543.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392875492|gb|AFM86578.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392875512|gb|AFM86588.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392876358|gb|AFM87011.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392879162|gb|AFM88413.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392880438|gb|AFM89051.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392882572|gb|AFM90118.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392883122|gb|AFM90393.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392883480|gb|AFM90572.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392883556|gb|AFM90610.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
gi|392883972|gb|AFM90818.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
Length = 137
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W +++N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSSHLQWMVIRNCSSFLIKRN--KQVYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
G V KRA ++ A + V K RAT +L + + R D R+
Sbjct: 59 GIVVVLKKRAGQRKPATSYEKITVNKNARATLNSLRHIIRKNNYRRDLRM 108
>gi|41055030|ref|NP_957355.1| 60S ribosomal protein L28 [Danio rerio]
gi|33416595|gb|AAH55584.1| Ribosomal protein L28-like [Danio rerio]
gi|49619151|gb|AAT68160.1| 60S ribosomal protein L28 [Danio rerio]
Length = 138
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S HL W +++N++++L+K + K+ +S EP NL +F+++GLIH KTI I+P AD
Sbjct: 1 MASPHLQWMVIRNSSSFLIKRN--KQTYSTEPNNLKARNAFRFNGLIHRKTIGIEPAADG 58
Query: 61 KGFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
KG V KR+ ++ A + G + K RAT ++ + R D R+
Sbjct: 59 KGVVVVLKKRSGQRKPATSYGKITINKNSRATLASVRNIIRKNKYRRDLRM 109
>gi|358335599|dbj|GAA54233.1| large subunit ribosomal protein L28e [Clonorchis sinensis]
Length = 383
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 10/96 (10%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL+W++VK NN +LMK N + FS++P N+ F YSGL+H K I I+P K
Sbjct: 82 MSSHLVWDLVKRNNCFLMKRGN--EQFSRDPLNMKGKNCFMYSGLVHKKAIGIKPEKYGK 139
Query: 62 GFACVTKRATKKPTADNKGFACVTK----RATKKTL 93
G + TKKP D+K V + R ++TL
Sbjct: 140 GIVLI----TKKPGYDHKPAKAVVRTKYVRGRRRTL 171
>gi|392875668|gb|AFM86666.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
Length = 137
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W +++N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSSHLQWMVIRNCSSFLIKRN--KQVYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
G V KRA ++ A + V K RAT +L + + R D R+
Sbjct: 59 GIVVVLKKRAGQRKPATSYEKITVNKNARATLNSLRHIIRKNNYRRDFRM 108
>gi|351710534|gb|EHB13453.1| 60S ribosomal protein L28 [Heterocephalus glaber]
Length = 137
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W IV+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMIVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|355753904|gb|EHH57869.1| hypothetical protein EGM_07604 [Macaca fascicularis]
Length = 142
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVIKRRSGQRKP 73
>gi|56541228|gb|AAH86797.1| Ribosomal protein L28 [Mus musculus]
Length = 137
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|159145646|gb|ABW90360.1| putative ribosomal protein L28 [Sipunculus nudus]
Length = 135
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W +++NN+++L+K K FS+EP NL + SF+Y+GLIH KT+ ++P +D K
Sbjct: 1 MSADLAWMVIRNNSSFLLKGS--KTTFSREPNNLKSKNSFRYNGLIHKKTVGVEPASDGK 58
Query: 62 GFACVTK 68
G VT+
Sbjct: 59 GVVLVTR 65
>gi|109113967|ref|XP_001113291.1| PREDICTED: 60S ribosomal protein L28-like isoform 1 [Macaca
mulatta]
gi|297272349|ref|XP_002800410.1| PREDICTED: 60S ribosomal protein L28-like isoform 2 [Macaca
mulatta]
gi|297272351|ref|XP_002800411.1| PREDICTED: 60S ribosomal protein L28-like isoform 3 [Macaca
mulatta]
gi|297272353|ref|XP_002800412.1| PREDICTED: 60S ribosomal protein L28-like isoform 4 [Macaca
mulatta]
gi|297272355|ref|XP_002800413.1| PREDICTED: 60S ribosomal protein L28-like isoform 5 [Macaca
mulatta]
gi|297272357|ref|XP_002800414.1| PREDICTED: 60S ribosomal protein L28-like isoform 6 [Macaca
mulatta]
gi|297272359|ref|XP_002800415.1| PREDICTED: 60S ribosomal protein L28-like isoform 7 [Macaca
mulatta]
gi|297272361|ref|XP_002800416.1| PREDICTED: 60S ribosomal protein L28-like isoform 8 [Macaca
mulatta]
Length = 137
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVIKRRSGQRKP 73
>gi|395861348|ref|XP_003802951.1| PREDICTED: 60S ribosomal protein L28 [Otolemur garnettii]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|14603467|gb|AAH10182.1| Ribosomal protein L28 [Homo sapiens]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVIKRRSGQRKP 73
>gi|149722508|ref|XP_001495815.1| PREDICTED: 60S ribosomal protein L28 [Equus caballus]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|426390256|ref|XP_004061522.1| PREDICTED: 60S ribosomal protein L28 isoform 1 [Gorilla gorilla
gorilla]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVIKRRSGQRKP 73
>gi|410982195|ref|XP_003997445.1| PREDICTED: 60S ribosomal protein L28 [Felis catus]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|327280582|ref|XP_003225031.1| PREDICTED: 60S ribosomal protein L28-like [Anolis carolinensis]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W IV+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMIVRNCSSFLIKRN--KQTYSMEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
G V KRA ++ A + + K RAT +L + + R D R+
Sbjct: 59 GIVVVLKKRAGQRKPATSYEKITINKNARATLSSLRHIIRKNNYRKDLRM 108
>gi|348559392|ref|XP_003465500.1| PREDICTED: 60S ribosomal protein L28-like [Cavia porcellus]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|301782051|ref|XP_002926429.1| PREDICTED: 60S ribosomal protein L28-like isoform 1 [Ailuropoda
melanoleuca]
gi|301782053|ref|XP_002926430.1| PREDICTED: 60S ribosomal protein L28-like isoform 2 [Ailuropoda
melanoleuca]
gi|281344145|gb|EFB19729.1| hypothetical protein PANDA_016089 [Ailuropoda melanoleuca]
gi|302030280|gb|ADK91580.1| ribosomal protein L28 [Ailuropoda melanoleuca]
gi|302030282|gb|ADK91581.1| ribosomal protein L28 [Ailuropoda melanoleuca]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|61372494|gb|AAX43853.1| ribosomal protein L28 [synthetic construct]
Length = 138
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVIKRRSGQRKP 73
>gi|297705986|ref|XP_002829834.1| PREDICTED: 60S ribosomal protein L28 isoform 2 [Pongo abelii]
gi|395751816|ref|XP_003779311.1| PREDICTED: 60S ribosomal protein L28 [Pongo abelii]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVIKRRSGQRKP 73
>gi|550019|gb|AAA85657.1| ribosomal protein L28 [Homo sapiens]
gi|1096941|prf||2113200D ribosomal protein L28
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVIKRRSGQRKP 73
>gi|90079751|dbj|BAE89555.1| unnamed protein product [Macaca fascicularis]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVIKRRSGQRKP 73
>gi|6677779|ref|NP_033107.1| 60S ribosomal protein L28 [Mus musculus]
gi|61889083|ref|NP_073188.2| 60S ribosomal protein L28 [Rattus norvegicus]
gi|308818153|ref|NP_001184202.1| uncharacterized protein LOC100505437 [Xenopus laevis]
gi|730549|sp|P41105.2|RL28_MOUSE RecName: Full=60S ribosomal protein L28
gi|488835|emb|CAA52848.1| ribosomal protein L28 [Mus musculus]
gi|12849064|dbj|BAB28192.1| unnamed protein product [Mus musculus]
gi|12858564|dbj|BAB31362.1| unnamed protein product [Mus musculus]
gi|19353451|gb|AAH24395.1| Ribosomal protein L28 [Mus musculus]
gi|26345120|dbj|BAC36209.1| unnamed protein product [Mus musculus]
gi|51980292|gb|AAH81800.1| Ribosomal protein L28 [Rattus norvegicus]
gi|56541100|gb|AAH86932.1| Ribosomal protein L28 [Mus musculus]
gi|61403317|gb|AAH92012.1| Ribosomal protein L28 [Mus musculus]
gi|67677982|gb|AAH97682.1| Unknown (protein for MGC:115078) [Xenopus laevis]
gi|148699314|gb|EDL31261.1| mCG20926, isoform CRA_a [Mus musculus]
gi|148699315|gb|EDL31262.1| mCG20926, isoform CRA_a [Mus musculus]
gi|148699316|gb|EDL31263.1| mCG20926, isoform CRA_a [Mus musculus]
gi|148707812|gb|EDL39759.1| mCG13936 [Mus musculus]
gi|149016673|gb|EDL75859.1| rCG22700, isoform CRA_a [Rattus norvegicus]
gi|149016674|gb|EDL75860.1| rCG22700, isoform CRA_a [Rattus norvegicus]
gi|149016675|gb|EDL75861.1| rCG22700, isoform CRA_a [Rattus norvegicus]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|296234650|ref|XP_002762547.1| PREDICTED: 60S ribosomal protein L28-like [Callithrix jacchus]
gi|403308566|ref|XP_003944729.1| PREDICTED: 60S ribosomal protein L28 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308568|ref|XP_003944730.1| PREDICTED: 60S ribosomal protein L28 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403308570|ref|XP_003944731.1| PREDICTED: 60S ribosomal protein L28 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|13904866|ref|NP_000982.2| 60S ribosomal protein L28 isoform 2 [Homo sapiens]
gi|388453781|ref|NP_001253048.1| 60S ribosomal protein L28 [Macaca mulatta]
gi|397471117|ref|XP_003807150.1| PREDICTED: 60S ribosomal protein L28 [Pan paniscus]
gi|402906819|ref|XP_003916180.1| PREDICTED: 60S ribosomal protein L28 isoform 1 [Papio anubis]
gi|402906821|ref|XP_003916181.1| PREDICTED: 60S ribosomal protein L28 isoform 2 [Papio anubis]
gi|441626590|ref|XP_004089172.1| PREDICTED: 60S ribosomal protein L28 [Nomascus leucogenys]
gi|22002069|sp|P46779.3|RL28_HUMAN RecName: Full=60S ribosomal protein L28
gi|14603452|gb|AAH10173.1| Ribosomal protein L28 [Homo sapiens]
gi|15079503|gb|AAH11582.1| Ribosomal protein L28 [Homo sapiens]
gi|48146165|emb|CAG33305.1| RPL28 [Homo sapiens]
gi|60655375|gb|AAX32251.1| ribosomal protein L28 [synthetic construct]
gi|119592780|gb|EAW72374.1| ribosomal protein L28, isoform CRA_a [Homo sapiens]
gi|123992119|gb|ABM83969.1| ribosomal protein L28 [synthetic construct]
gi|123999456|gb|ABM87286.1| ribosomal protein L28 [synthetic construct]
gi|189053081|dbj|BAG34703.1| unnamed protein product [Homo sapiens]
gi|208967316|dbj|BAG73672.1| ribosomal protein L28 [synthetic construct]
gi|387539742|gb|AFJ70498.1| 60S ribosomal protein L28 isoform 2 [Macaca mulatta]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVIKRRSGQRKP 73
>gi|387018280|gb|AFJ51258.1| 60S ribosomal protein L28 [Crotalus adamanteus]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W IV+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMIVRNCSSFLIKRN--KQTYSMEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
G V KRA ++ A + + K RAT +L + + R D R+
Sbjct: 59 GIVVVLKKRAGQRKPATSYEKITINKNARATLSSLRHIIRKNNYRKDLRM 108
>gi|148698365|gb|EDL30312.1| mCG120681 [Mus musculus]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|149254610|ref|XP_001473974.1| PREDICTED: 60S ribosomal protein L28-like [Mus musculus]
gi|309265470|ref|XP_003086505.1| PREDICTED: 60S ribosomal protein L28-like [Mus musculus]
Length = 137
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|345785949|ref|XP_533581.3| PREDICTED: 60S ribosomal protein L28 isoform 2 [Canis lupus
familiaris]
gi|345785951|ref|XP_003432751.1| PREDICTED: 60S ribosomal protein L28 isoform 1 [Canis lupus
familiaris]
Length = 137
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVLKRRSGQRKP 73
>gi|225710144|gb|ACO10918.1| 60S ribosomal protein L28 [Caligus rogercresseyi]
Length = 147
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ +IW++++ N+A+L+K N K FS EP NL N S +YSGL +SK I I PTA+NK
Sbjct: 1 MSNDVIWSVIRGNSAFLLKKRNCPKPFSTEPLNLSNKHSKRYSGLANSKAIGITPTANNK 60
Query: 62 GFACVTKRATKK 73
GF K+ + +
Sbjct: 61 GFVLSMKKTSDR 72
>gi|344270159|ref|XP_003406913.1| PREDICTED: 60S ribosomal protein L28-like [Loxodonta africana]
Length = 137
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVLKRRSGQRKP 73
>gi|27682045|ref|XP_212890.1| PREDICTED: 60S ribosomal protein L28-like [Rattus norvegicus]
gi|109462346|ref|XP_001057767.1| PREDICTED: 60S ribosomal protein L28-like [Rattus norvegicus]
Length = 137
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF Y+GLIH KT+ ++PTAD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPKNLKARNSFGYNGLIHRKTVGVEPTADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|291393699|ref|XP_002713247.1| PREDICTED: ribosomal protein L28-like [Oryctolagus cuniculus]
Length = 137
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|78369422|ref|NP_001030580.1| 60S ribosomal protein L28 [Bos taurus]
gi|426243245|ref|XP_004015469.1| PREDICTED: 60S ribosomal protein L28 isoform 1 [Ovis aries]
gi|426243247|ref|XP_004015470.1| PREDICTED: 60S ribosomal protein L28 isoform 2 [Ovis aries]
gi|426243249|ref|XP_004015471.1| PREDICTED: 60S ribosomal protein L28 isoform 3 [Ovis aries]
gi|108860931|sp|Q3T0L7.3|RL28_BOVIN RecName: Full=60S ribosomal protein L28
gi|74267688|gb|AAI02345.1| Ribosomal protein L28 [Bos taurus]
gi|296477269|tpg|DAA19384.1| TPA: 60S ribosomal protein L28 [Bos taurus]
gi|440897013|gb|ELR48796.1| 60S ribosomal protein L28 [Bos grunniens mutus]
Length = 137
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|431902989|gb|ELK09171.1| 60S ribosomal protein L28 [Pteropus alecto]
Length = 137
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVIVMKRRSGQRKP 73
>gi|209915584|ref|NP_001129607.1| 60S ribosomal protein L28 isoform 3 [Homo sapiens]
Length = 169
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVIKRRSGQRKP 73
>gi|417396097|gb|JAA45082.1| Putative 60s ribosomal protein l28 isoform 1 [Desmodus rotundus]
Length = 137
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +++N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVIRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|332857381|ref|XP_001135297.2| PREDICTED: 60S ribosomal protein L28 isoform 1 [Pan troglodytes]
Length = 169
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVIKRRSGQRKP 73
>gi|209915581|ref|NP_001129606.1| 60S ribosomal protein L28 isoform 1 [Homo sapiens]
gi|194374529|dbj|BAG57160.1| unnamed protein product [Homo sapiens]
Length = 163
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 15/122 (12%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKR--ATKKP------TADNKGFACVTKRATKKTLSGHVDIGSARMDARLYIFEM 113
G V KR +KP T NK RAT ++ + R D R+ + +
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINK-----NARATLSSIRHMIRKNKYRPDLRMVSWGL 113
Query: 114 GL 115
G+
Sbjct: 114 GI 115
>gi|441626593|ref|XP_004089173.1| PREDICTED: 60S ribosomal protein L28 [Nomascus leucogenys]
Length = 169
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVIKRRSGQRKP 73
>gi|392874606|gb|AFM86135.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
Length = 137
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 4 SHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGF 63
SHL W +++N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD KG
Sbjct: 3 SHLQWMVIRNCSSFLIKRN--KQVYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGI 60
Query: 64 ACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
V KRA ++ A + V K RAT +L + + R D R+
Sbjct: 61 VVVLKKRAGQRKPATSYEKITVNKNARATLNSLRHIIRKNNYRRDLRM 108
>gi|198421288|ref|XP_002130777.1| PREDICTED: similar to 60S ribosomal protein L28 isoform 1 [Ciona
intestinalis]
gi|198421290|ref|XP_002130793.1| PREDICTED: similar to 60S ribosomal protein L28 isoform 2 [Ciona
intestinalis]
Length = 125
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W I++NN+ +L+K ++++ F+KE NL N SF+Y+GLIH KT+ ++ + K
Sbjct: 1 MSAHLQWMIIRNNSCHLIKRNDMQ--FTKEQNNLRNKNSFRYNGLIHKKTVGVEADPNGK 58
Query: 62 GFACVTKR---ATKKPTADNKGFACVTKRATKKTLSGHVDIGSARMDARL 108
G VTK+ K ++N+ R T +T+ + S R D R+
Sbjct: 59 GVVLVTKKPKMVNKPGQSENRTTLTKGGRRTIRTIKRTIRKNSYRKDLRM 108
>gi|293343890|ref|XP_002725599.1| PREDICTED: 60S ribosomal protein L28-like [Rattus norvegicus]
gi|293355780|ref|XP_002728752.1| PREDICTED: 60S ribosomal protein L28-like [Rattus norvegicus]
Length = 137
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKAGNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|209915588|ref|NP_001129609.1| 60S ribosomal protein L28 isoform 5 [Homo sapiens]
gi|332857383|ref|XP_003316737.1| PREDICTED: 60S ribosomal protein L28 isoform 2 [Pan troglodytes]
gi|119592782|gb|EAW72376.1| ribosomal protein L28, isoform CRA_c [Homo sapiens]
Length = 69
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRATK 72
G V KR ++
Sbjct: 59 GVVVVIKRRSE 69
>gi|426390258|ref|XP_004061523.1| PREDICTED: 60S ribosomal protein L28 isoform 2 [Gorilla gorilla
gorilla]
Length = 140
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVIKRRSGQRKP 73
>gi|126344753|ref|XP_001362998.1| PREDICTED: 60S ribosomal protein L28-like [Monodelphis domestica]
Length = 137
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +++N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ I+P AD K
Sbjct: 1 MSAHLQWMVLRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGIEPAADGK 58
Query: 62 GFACVTKR--ATKKP 74
G V KR +KP
Sbjct: 59 GIVVVLKRRAGQRKP 73
>gi|387913904|gb|AFK10561.1| 60S ribosomal protein L28-like protein [Callorhinchus milii]
Length = 137
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W +++N +++L+K + K+ +S EP NL SF+Y+GLIH KT ++P AD K
Sbjct: 1 MSSHLQWMVIRNCSSFLIKRN--KQVYSTEPNNLKARNSFRYNGLIHRKTEGVEPAADGK 58
Query: 62 GFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
G V KRA ++ A + V K RAT +L + + R D R+
Sbjct: 59 GIVVVLKKRAGQRKPATSYEKITVNKNARATLNSLRHIIRKNNYRRDLRM 108
>gi|38112699|gb|AAR11386.1| 60S ribosomal protein L28 [Hippocampus comes]
Length = 137
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +++N +++L+K D K+ +S EP NL SF+++GL+H KT+ +QP AD K
Sbjct: 1 MSAHLQWMVIRNCSSFLLKRD--KQTYSTEPNNLKARNSFRFNGLVHKKTVGVQPAADGK 58
Query: 62 GFACVT-KRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
G V KRA + A++ + K RAT ++ + + R D R+
Sbjct: 59 GVVVVIKKRAGQHKPANSYNKITINKNGRATLNSVRHIIRKNNYRKDLRM 108
>gi|384497881|gb|EIE88372.1| ribosomal protein L28e [Rhizopus delemar RA 99-880]
Length = 139
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L+W IVKNNN++L+K N++ FS EP NL NL SFKYSGL + K I P A +
Sbjct: 1 MSADLVWAIVKNNNSFLVKRQNVQ--FSSEPSNLLNLNSFKYSGLANYKNAAIIPAA--R 56
Query: 62 GFACVTKRATKKPTADNKGFACV---TKRATKKTLSGHVDIG 100
G ++A K+ + V T+R T K+++ + G
Sbjct: 57 GVRVTLRKANKEQSPAKSANTVVIAKTRRQTAKSVANLIARG 98
>gi|332256560|ref|XP_003277384.1| PREDICTED: 60S ribosomal protein L28 [Nomascus leucogenys]
Length = 87
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT 71
G V KR +
Sbjct: 59 GVVVVIKRRS 68
>gi|384494823|gb|EIE85314.1| ribosomal protein L28e [Rhizopus delemar RA 99-880]
Length = 139
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L+W+IVKNNN++L+K N++ FS EP NL NL SFKYSG+ + K I P A +
Sbjct: 1 MSADLVWSIVKNNNSFLVKRQNVQ--FSSEPSNLLNLNSFKYSGIANYKNAAIIPAA--R 56
Query: 62 GFACVTKRATKKPTADNKGFACV---TKRATKKTLSGHVDIG 100
G ++A K+ + V T+R T K+++ + G
Sbjct: 57 GVRVTLRKANKEQSPAKSANTVVIAKTRRQTAKSVANLIARG 98
>gi|355703918|gb|EHH30409.1| hypothetical protein EGK_11075 [Macaca mulatta]
Length = 137
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMAVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVIKRRSGQRKP 73
>gi|71021849|ref|XP_761155.1| hypothetical protein UM05008.1 [Ustilago maydis 521]
gi|46100593|gb|EAK85826.1| hypothetical protein UM05008.1 [Ustilago maydis 521]
Length = 221
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S L W +V+NN+++++K I + FS+EP NL L S+KYSGL+++K + I+
Sbjct: 1 MASQDLQWLLVRNNSSFIVKQKGIGRIFSREPRNLVQLHSYKYSGLVNAKAVGIEAAKSG 60
Query: 61 KGFACVTKRATKKPTADNK 79
KG TK A + +A K
Sbjct: 61 KGVVITTKNAKQSSSAIKK 79
>gi|259155421|ref|NP_001158770.1| 60S ribosomal protein L28 [Salmo salar]
gi|223647250|gb|ACN10383.1| 60S ribosomal protein L28 [Salmo salar]
gi|223673127|gb|ACN12745.1| 60S ribosomal protein L28 [Salmo salar]
Length = 137
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W +++N +++L+K + + +S EP NL + SF+++GL+H KT+ +QP AD K
Sbjct: 1 MSSHLQWMVIRNCSSFLIKRNG--QTYSTEPNNLKSKNSFRFNGLVHRKTVGVQPAADGK 58
Query: 62 GFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
G V KRA ++ A + + K RAT +L + + R D R+
Sbjct: 59 GVVVVLKKRAGQRKPATSYEKITINKNSRATLSSLRHIIRKNNYRKDLRM 108
>gi|213513884|ref|NP_001133165.1| 60S ribosomal protein L28 [Salmo salar]
gi|197632263|gb|ACH70855.1| ribosomal protein L28 [Salmo salar]
Length = 137
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W +++N +++L+K + + +S EP NL + SF+++GL+H KT+ +QP AD K
Sbjct: 1 MSSHLQWMVIRNCSSFLIKRNG--QTYSTEPNNLKSKNSFRFNGLVHRKTVGVQPAADGK 58
Query: 62 GFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
G V KRA ++ A + + K RAT +L + + R D R+
Sbjct: 59 GVVVVLKKRAGQRKPATSYEKITINKNSRATLSSLRHIIRKNNYRKDLRM 108
>gi|432885021|ref|XP_004074618.1| PREDICTED: 60S ribosomal protein L28-like isoform 2 [Oryzias
latipes]
Length = 147
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
++S+HL W +++N +++L+K + + +S EP NL SF+++GL+H KT+ +QP AD
Sbjct: 10 IMSAHLQWMVIRNCSSFLIKRNG--QTYSTEPNNLKARNSFRFNGLVHKKTVGVQPAADG 67
Query: 61 KGFACVTKR--ATKKPTAD-NKGFACVTKRATKKTLSGHVDIGSARMDARL 108
KG V K+ KP + NK RAT +L + S R D R+
Sbjct: 68 KGIVVVLKKRAGQNKPASSYNKITINKNSRATLNSLRHIIRKNSYRKDLRM 118
>gi|209915586|ref|NP_001129608.1| 60S ribosomal protein L28 isoform 4 [Homo sapiens]
gi|119592781|gb|EAW72375.1| ribosomal protein L28, isoform CRA_b [Homo sapiens]
Length = 87
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT 71
G V KR +
Sbjct: 59 GVVVVIKRRS 68
>gi|293341876|ref|XP_002725071.1| PREDICTED: 60S ribosomal protein L28-like [Rattus norvegicus]
gi|293353295|ref|XP_001073240.2| PREDICTED: 60S ribosomal protein L28-like [Rattus norvegicus]
Length = 147
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL S +Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSLRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|432885019|ref|XP_004074617.1| PREDICTED: 60S ribosomal protein L28-like isoform 1 [Oryzias
latipes]
Length = 137
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +++N +++L+K + + +S EP NL SF+++GL+H KT+ +QP AD K
Sbjct: 1 MSAHLQWMVIRNCSSFLIKRNG--QTYSTEPNNLKARNSFRFNGLVHKKTVGVQPAADGK 58
Query: 62 GFACVTKR--ATKKPTAD-NKGFACVTKRATKKTLSGHVDIGSARMDARL 108
G V K+ KP + NK RAT +L + S R D R+
Sbjct: 59 GIVVVLKKRAGQNKPASSYNKITINKNSRATLNSLRHIIRKNSYRKDLRM 108
>gi|443894146|dbj|GAC71496.1| 60S ribosomal protein L28 [Pseudozyma antarctica T-34]
Length = 172
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S L W +V+NN+++++K + + FS+EP NL L S+KYSG++++K + I+
Sbjct: 1 MASQDLQWLLVRNNSSFIVKQKGLGRIFSREPRNLVQLHSYKYSGVVNAKAVGIEAAKSG 60
Query: 61 KGFACVTKRATKKP 74
KG TK + K P
Sbjct: 61 KGIVLTTKNSKKTP 74
>gi|410903606|ref|XP_003965284.1| PREDICTED: 60S ribosomal protein L28-like isoform 1 [Takifugu
rubripes]
gi|410903608|ref|XP_003965285.1| PREDICTED: 60S ribosomal protein L28-like isoform 2 [Takifugu
rubripes]
Length = 137
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W +++N +++L+K + + +S EP NL SF+++GL+H KT+ +QP AD K
Sbjct: 1 MSSHLQWMVIRNCSSFLIKRNG--QTYSTEPNNLKARNSFRFNGLVHKKTVGVQPAADGK 58
Query: 62 GFACVTK--RATKKP-TADNKGFACVTKRATKKTLSGHVDIGSARMDARL 108
G V K R KP T+ K RAT +L + R D R+
Sbjct: 59 GVVVVLKKRRGQNKPATSYEKITINKNSRATLSSLRHIISKNRYRKDLRM 108
>gi|60099215|emb|CAH65438.1| hypothetical protein RCJMB04_34p20 [Gallus gallus]
Length = 138
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K ++ + +S EP NL + SF+Y+GLIH KT+ ++P D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRNH--QTYSTEPNNLKSRNSFRYNGLIHRKTLGVEPAPDGK 58
Query: 62 GFACVTKRAT--KKPTADNKGFACVTK-RATKKTLSGHVDIGSARMDARL 108
G V K+ + +KP A + RAT +L V R D R+
Sbjct: 59 GVLVVLKKRSGQRKPAASYDRISIRRNARATLSSLRHLVRKNRYRPDLRM 108
>gi|357136110|ref|XP_003569649.1| PREDICTED: 60S ribosomal protein L28-1-like [Brachypodium
distachyon]
Length = 145
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V L+W +VK NN++L+K N K FSKEP NL N+ S+KYSGL + KT+ +QP +
Sbjct: 4 VPDSLVWELVKKNNSFLIKQFGNSNAKVQFSKEPNNLYNVHSYKYSGLANKKTVTVQPAS 63
Query: 59 DNKGFACVTKRATKK 73
D + ++ TKK
Sbjct: 64 DKEMSVVLSTTKTKK 78
>gi|291391369|ref|XP_002712433.1| PREDICTED: ribosomal protein L28-like [Oryctolagus cuniculus]
Length = 147
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF Y+GLIH KT+ ++P AD K
Sbjct: 10 LSAHLQWMVVRNCSSFLIKRN--KQIYSMEPNNLKARNSFCYNGLIHRKTVGVEPAADGK 67
Query: 62 GFACVTKR 69
G V KR
Sbjct: 68 GVVVVMKR 75
>gi|384501427|gb|EIE91918.1| ribosomal protein L28e [Rhizopus delemar RA 99-880]
Length = 139
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L+W IVKNNN++L+K N++ FS EP NL NL SFKYSG+ + K I P A +
Sbjct: 1 MSADLVWAIVKNNNSFLVKRQNVQ--FSSEPSNLLNLNSFKYSGVANYKNAAIIPAA--R 56
Query: 62 GFACVTKRATKKPT---ADNKGFACVTKRATKKTLSGHVDIG 100
G ++A K+ + + N T+R T K+++ + G
Sbjct: 57 GVRVTLRKANKEQSPAKSANTVIIAKTRRQTAKSVANLIARG 98
>gi|62859703|ref|NP_001016714.1| ribosomal protein L28 [Xenopus (Silurana) tropicalis]
gi|138519961|gb|AAI35646.1| ribosomal protein L28 [Xenopus (Silurana) tropicalis]
Length = 137
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +++N +++L+K ++ + FS EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWMVIRNCSSFLVKRNH--RIFSTEPNNLKARNSFRYNGLIHKKTVGVEPAADGK 58
Query: 62 GFACVTKR--ATKKP 74
G V K+ +KP
Sbjct: 59 GVIVVLKKRAGQRKP 73
>gi|153791553|ref|NP_001093336.1| ribosomal protein L28 [Xenopus laevis]
gi|51873945|gb|AAH78544.1| LOC100101273 protein [Xenopus laevis]
Length = 137
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +++N +++++K ++ + FS EP NL SF+Y+GLIH KT+ +QP AD K
Sbjct: 1 MSAHLQWMVIRNCSSFIVKRNH--QVFSTEPNNLKARNSFRYNGLIHKKTVGVQPAADGK 58
Query: 62 GFACVTKR--ATKKP 74
G V K+ +KP
Sbjct: 59 GVIVVLKKRAGQRKP 73
>gi|348528007|ref|XP_003451510.1| PREDICTED: 60S ribosomal protein L28-like isoform 1 [Oreochromis
niloticus]
gi|348528009|ref|XP_003451511.1| PREDICTED: 60S ribosomal protein L28-like isoform 2 [Oreochromis
niloticus]
Length = 137
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W +++N +++L+K + + +S EP NL SF+++GL+H KT+ +QP AD K
Sbjct: 1 MSSHLQWMVIRNCSSFLIKRNG--QTYSTEPNNLKARNSFRFNGLVHKKTVGVQPAADGK 58
Query: 62 GFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
G V KRA + A++ + K RAT +L + R D R+
Sbjct: 59 GVVVVLKKRAGQNKPANSYVKVTINKNSRATLNSLRHIIRKNKYRKDLRM 108
>gi|432096442|gb|ELK27190.1| 60S ribosomal protein L28 [Myotis davidii]
Length = 105
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W IV+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P D K
Sbjct: 1 MSAHLQWMIVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAPDGK 58
Query: 62 GFACVTKR--ATKKP 74
G + KR +KP
Sbjct: 59 GVVVIMKRRSGQRKP 73
>gi|197247219|gb|AAI65924.1| Rpl28l protein [Danio rerio]
Length = 138
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S HL W +++N++++L+K + K+ +S EP NL +F+++GLIH KTI I+ AD
Sbjct: 1 MASPHLQWMVIRNSSSFLIKRN--KQTYSTEPNNLKARNAFRFNGLIHRKTIGIESAADG 58
Query: 61 KGFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
KG V KR ++ A + G + K RAT ++ + R D R+
Sbjct: 59 KGVVVVLKKRLGQRKPATSYGKITINKNSRATLASVRNIIRKNKYRRDLRM 109
>gi|348554339|ref|XP_003462983.1| PREDICTED: 60S ribosomal protein L28-like [Cavia porcellus]
Length = 137
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 1 MSAHLQWIVVWNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|226531358|ref|NP_001147520.1| 60S ribosomal protein L28 [Zea mays]
gi|195610410|gb|ACG27035.1| 60S ribosomal protein L28 [Zea mays]
gi|195611946|gb|ACG27803.1| 60S ribosomal protein L28 [Zea mays]
gi|195624104|gb|ACG33882.1| 60S ribosomal protein L28 [Zea mays]
Length = 146
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IV+ NN++L+K N K F+KEP NL NL S+KYSGL + KT+ IQP A
Sbjct: 4 VPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNLHSYKYSGLANKKTVTIQPAA 63
Query: 59 DNKGFACVTKRATKK 73
++ TKK
Sbjct: 64 GKDSAVVLSTTKTKK 78
>gi|226475776|emb|CAX71978.1| ribosomal protein L28 [Schistosoma japonicum]
Length = 134
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHLIW+++KNN+ +LMK + FS++P NL N F+Y GL+H K I I+ K
Sbjct: 1 MSSHLIWDLIKNNDCFLMKRG--PECFSRDPLNLKNKNCFRYCGLVHKKAIGIKEERYGK 58
Query: 62 GFACVTKRATKKPTADNKGFACVTK----RATKKTLS 94
G TK K D+K VT+ R ++TL
Sbjct: 59 GVVVTTKNVAK----DHKPAKAVTRTKFVRGRRRTLQ 91
>gi|326516226|dbj|BAJ88136.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 143
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
VS L+W +V+ NN +L+K N K FSKEP NL N+ S+KYSGL + KT+ +QP A
Sbjct: 4 VSDSLVWELVRKNNCFLIKQFGNSNAKVQFSKEPNNLYNVHSYKYSGLANKKTVTVQPAA 63
Query: 59 DNKGFACVTKRATKK 73
+ + ++ +KK
Sbjct: 64 EKEMTVVLSTTKSKK 78
>gi|238231775|ref|NP_001154074.1| 60S ribosomal protein L28 [Oncorhynchus mykiss]
gi|225703872|gb|ACO07782.1| 60S ribosomal protein L28 [Oncorhynchus mykiss]
Length = 136
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W +++N +++L+K + + +S EP NL + SF+++GL+H KT+ +QP AD K
Sbjct: 1 MSSHLQWMVIRNCSSFLIKRNG--QTYSTEPHNLKSKNSFRFNGLVHRKTVGVQPAADGK 58
Query: 62 GFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDAR 107
G V KRA ++ A + + K RAT +L + + R D R
Sbjct: 59 GVVVVLKKRAGQRKPATSYEKITINKNSRATLSSLRHIIRKSNYRKDLR 107
>gi|62088834|dbj|BAD92864.1| ribosomal protein L28 variant [Homo sapiens]
Length = 95
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 5 HLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFA 64
HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD KG
Sbjct: 12 HLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVV 69
Query: 65 CVTKRAT 71
V KR +
Sbjct: 70 VVIKRRS 76
>gi|357132741|ref|XP_003567987.1| PREDICTED: 60S ribosomal protein L28-1-like [Brachypodium
distachyon]
Length = 147
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW +VK NN++L+K N K FSKEP NL N+ S+K+SGL ++KT+ IQP+A
Sbjct: 4 VPGPLIWELVKKNNSFLVKQFGNGNAKVQFSKEPNNLYNVHSYKFSGLANNKTVTIQPSA 63
Query: 59 -DNKGFACVTKRATKK 73
D+K T + K+
Sbjct: 64 GDDKAVVLATTKTKKQ 79
>gi|189502954|gb|ACE06858.1| unknown [Schistosoma japonicum]
Length = 110
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHLIW+++KNN+ +LMK + FS++P NL N F+Y GL+H K I I+ K
Sbjct: 1 MSSHLIWDLIKNNHCFLMKRG--PECFSRDPLNLKNKNRFRYCGLVHKKAIGIKEERYGK 58
Query: 62 GFACVTKRATKKPTADNKGFACVTK----RATKKTLS 94
G TK K D+K VT+ R ++TL
Sbjct: 59 GVVVTTKNVAK----DHKPAKAVTRTKFVRGRRRTLQ 91
>gi|351728103|ref|NP_001238207.1| uncharacterized protein LOC100500189 [Glycine max]
gi|255629617|gb|ACU15156.1| unknown [Glycine max]
Length = 150
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW +VK NN++L+K FS+EP NL NL +FKYSGL + KT+ +QPT
Sbjct: 4 VPGQLIWEVVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTVQPTG 63
Query: 59 DNKGFACVTKRATK--KPTA 76
++ T + K KP A
Sbjct: 64 KDQSVLLATTKTKKQNKPAA 83
>gi|56758954|gb|AAW27617.1| unknown [Schistosoma japonicum]
gi|226475774|emb|CAX71977.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226475778|emb|CAX71979.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226475780|emb|CAX71980.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226475782|emb|CAX71981.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226475784|emb|CAX71982.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226475786|emb|CAX71983.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479552|emb|CAX78639.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479554|emb|CAX78640.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479558|emb|CAX78642.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479560|emb|CAX78643.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479562|emb|CAX78644.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479564|emb|CAX78645.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479568|emb|CAX78647.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479570|emb|CAX78648.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479572|emb|CAX78649.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479576|emb|CAX78651.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479578|emb|CAX78652.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479580|emb|CAX78653.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479582|emb|CAX78654.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479584|emb|CAX78655.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479586|emb|CAX78656.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479592|emb|CAX78659.1| ribosomal protein L28 [Schistosoma japonicum]
Length = 134
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHLIW+++KNN+ +LMK + FS++P NL N F+Y GL+H K I I+ K
Sbjct: 1 MSSHLIWDLIKNNHCFLMKRG--PECFSRDPLNLKNKNCFRYCGLVHKKAIGIKEERYGK 58
Query: 62 GFACVTKRATKKPTADNKGFACVTK----RATKKTLS 94
G TK K D+K VT+ R ++TL
Sbjct: 59 GVVVTTKNVAK----DHKPAKAVTRTKFVRGRRRTLQ 91
>gi|226479550|emb|CAX78638.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479556|emb|CAX78641.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479566|emb|CAX78646.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479574|emb|CAX78650.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479588|emb|CAX78657.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479590|emb|CAX78658.1| ribosomal protein L28 [Schistosoma japonicum]
gi|226479594|emb|CAX78660.1| ribosomal protein L28 [Schistosoma japonicum]
Length = 134
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHLIW+++KNN+ +LMK + FS++P NL N F+Y GL+H K I I+ K
Sbjct: 1 MSSHLIWDLIKNNHCFLMKRG--PECFSRDPLNLKNKNCFRYCGLVHKKAIGIKEERYGK 58
Query: 62 GFACVTKRATKKPTADNKGFACVTK----RATKKTLS 94
G TK K D+K VT+ R ++TL
Sbjct: 59 GVVVTTKNVAK----DHKPAKAVTRTKFVRGRRRTLQ 91
>gi|260797415|ref|XP_002593698.1| hypothetical protein BRAFLDRAFT_131797 [Branchiostoma floridae]
gi|229278926|gb|EEN49709.1| hypothetical protein BRAFLDRAFT_131797 [Branchiostoma floridae]
Length = 136
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 12/110 (10%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W I++NN+++L+K + K+ F++EP NL S++Y+GL+H KT+ ++ D K
Sbjct: 1 MSADLQWMIIRNNSSFLLKRN--KQSFTREPNNLKARNSYRYNGLVHKKTVGVEAAPDGK 58
Query: 62 GFACVTKRATKKPTADNKGFACVTKRATKKTLS--GHVDIGSARMDARLY 109
G VT++ KG K ++ TLS G + + R R Y
Sbjct: 59 GVVLVTRK--------QKGLRKPAKATSRVTLSRGGRQTLTTIRRAVRGY 100
>gi|188572542|gb|ACD65177.1| putative 60S ribosomal protein RPL28 [Phoronis muelleri]
Length = 135
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 7/78 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
+S+ L W IV+NN+A+ +K NI F++E NL + SF+YSGL+ KT+ ++P A
Sbjct: 1 MSADLQWLIVRNNSAFTLKNRLGANIT--FNREANNLKGVNSFRYSGLVQQKTVSVEPCA 58
Query: 59 DNKGFACVTKRAT--KKP 74
D KG A VT++ +KP
Sbjct: 59 DGKGVALVTRKTNSWRKP 76
>gi|149286996|gb|ABR23397.1| ribosomal protein L28 [Ornithodoros parkeri]
Length = 141
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W IVK+ +++L+K NIKKWFS +P N L S K+SG + + ++P NK
Sbjct: 1 MSAHLQWMIVKDQSSFLVKKRNIKKWFSIDPLNPRGLHSRKFSGTTSVRALTVEPHPSNK 60
Query: 62 GFACVTKR 69
G V KR
Sbjct: 61 GVQLVAKR 68
>gi|343425891|emb|CBQ69424.1| related to 60S ribosomal protein L28 [Sporisorium reilianum SRZ2]
Length = 153
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S L W +V+NN+++++K + FS+EP NL L SFKYSG++++K + I+
Sbjct: 1 MASQDLQWLLVRNNSSFIVKQKGLGCIFSREPRNLVQLHSFKYSGVVNAKAVGIEAAKSG 60
Query: 61 KGFACVTK---------RATKKPTADNKG 80
KG TK +ATK + NKG
Sbjct: 61 KGIVLTTKNSKQGASAIKATKNASTINKG 89
>gi|194698148|gb|ACF83158.1| unknown [Zea mays]
gi|413948282|gb|AFW80931.1| 60S ribosomal protein L28 isoform 1 [Zea mays]
gi|413948283|gb|AFW80932.1| 60S ribosomal protein L28 isoform 2 [Zea mays]
gi|413948284|gb|AFW80933.1| 60S ribosomal protein L28 isoform 3 [Zea mays]
gi|413948285|gb|AFW80934.1| 60S ribosomal protein L28 isoform 4 [Zea mays]
Length = 146
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IV+ NN++L+K N K F+KEP NL N+ S+KYSGL + KT+ IQP A
Sbjct: 4 VPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGLANKKTVTIQPAA 63
Query: 59 DNKGFACVTKRATKK 73
++ TKK
Sbjct: 64 GKDSAVVLSTTKTKK 78
>gi|160552251|gb|ABX44831.1| putative 60S ribosomal protein RPL28 [Flustra foliacea]
Length = 122
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W+I++ N+++L+K +++ ++KEP NL + SF+++GL+ KT+ ++ AD K
Sbjct: 1 MSSALQWSIIRKNSSFLLKRNDV--LYTKEPNNLRGINSFRFNGLVQEKTVGVEANADGK 58
Query: 62 GFACVTKRATKKPTADNKGFACV----TKRATK---KTLSGH 96
G VTK A N + ++RA K KTL G
Sbjct: 59 GVTLVTKNKKSNQPAKNYNRIALKKNNSRRAFKTIMKTLKGQ 100
>gi|326532738|dbj|BAJ89214.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 147
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V L+W +VK NN +L+K N K FSKEP NL N+ S+K+SGL +SKT+ +QP+A
Sbjct: 4 VPGSLVWELVKKNNCFLIKQFGNSNAKVQFSKEPNNLYNVHSYKFSGLANSKTVAVQPSA 63
Query: 59 DNKGFACVTKRATKK 73
++ TKK
Sbjct: 64 GEDKAVVLSTTKTKK 78
>gi|47209226|emb|CAF89608.1| unnamed protein product [Tetraodon nigroviridis]
Length = 70
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL W +++N +++L+K + + +S EP NL SF+++GL+H KT+ +QP AD K
Sbjct: 1 MSSHLQWMVIRNCSSFLIKRNG--QTYSTEPNNLKARNSFRFNGLVHKKTVGVQPAADGK 58
Query: 62 GFACVTKR 69
G V K+
Sbjct: 59 GIVVVLKK 66
>gi|170573965|ref|XP_001892616.1| 60S ribosomal protein L28 [Brugia malayi]
gi|158601721|gb|EDP38554.1| 60S ribosomal protein L28, putative [Brugia malayi]
Length = 138
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
MVS+ + W +++ +++L + I K FS+E N+ + S +++GL+H K + IQ T+D
Sbjct: 1 MVSADIQWQVIRKTSSFLRRQRGIPKHFSRERFNIKGVNSIRFNGLVHRKGLDIQATSDG 60
Query: 61 KGFACVTKRATKKPTADNKGFACVTKRATKKTL 93
KG V K+ K G + K+ ++K+L
Sbjct: 61 KGIVVVMKKRGKTFFPAKSGVSVTLKKNSRKSL 93
>gi|321472399|gb|EFX83369.1| hypothetical protein DAPPUDRAFT_230702 [Daphnia pulex]
Length = 138
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S HL W I + N+++++K N+K+ FS EP +L N +KY+ L+H I ++P D
Sbjct: 1 MSSPHLQWLITRKNSSFILKKRNVKQPFSTEPLHLTNRHCYKYNTLVHKNVIGVEPAKDK 60
Query: 61 KGFACVTKRATK--KPTAD 77
GF K TK KP A
Sbjct: 61 NGFVVAMKSKTKVFKPKAS 79
>gi|197210357|gb|ACH48186.1| 60S ribosomal protein L28 [Haplopelma schmidti]
Length = 138
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W +++N +++L+K NIKK+FS++P N+ N+ S +++G+IH K ++I+P +
Sbjct: 1 MSTDLQWMVIRNCSSHLVKKRNIKKYFSRDPLNMKNIHSPRFAGVIHKKALNIEPHSSKP 60
Query: 62 GFACV-TKRATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
G V KR +K A N +TK R T ++ ++ R D ++
Sbjct: 61 GVVLVYKKRKYQKKPAKNIARVPLTKGARRTMTSIKRFINSNFYRKDLKM 110
>gi|356550472|ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glycine max]
Length = 150
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN++L+K FS+EP NL NL +FKYSGL + KT+ +QP
Sbjct: 4 VPGQLIWEIVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANQKTVTVQPAG 63
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTKRATKK 91
++ AT K NK A + K KK
Sbjct: 64 KDQSVLL----ATTKTKKQNKPAALLHKSVMKK 92
>gi|164690993|dbj|BAF98679.1| ribosomal protein L28 [Solea senegalensis]
Length = 137
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +++N +++L+K + + +S EP +L + SF+++GL+H KT+ +QP AD K
Sbjct: 1 MSAHLQWMVIRNCSSFLLKRNG--QTYSTEPNHLKSRNSFRFNGLVHKKTVGVQPAADGK 58
Query: 62 GFACVTK--RATKKP 74
G V K R KP
Sbjct: 59 GVVVVLKKRRGQHKP 73
>gi|60417174|emb|CAH57698.1| 60S ribosomal protein L28 [Platichthys flesus]
Length = 137
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +++N +++L+K + + +S EP NL + F+++GL+H KT+ +QP AD K
Sbjct: 1 MSAHLQWMVIRNCSSFLIKRNG--QTYSTEPNNLKSRNPFRFNGLVHKKTVGVQPAADGK 58
Query: 62 GFACVTK--RATKKPTADNKGFAC-VTKRATKKTLSGHVDIGSARMDARL 108
G V K R KP + RAT +L + + R D R+
Sbjct: 59 GVVVVLKKRRGQHKPAGSYEKITINKNSRATLNSLRHIIRKNNYRKDLRM 108
>gi|346465839|gb|AEO32764.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN++L+K K FSKEP NL NL SFK+SGL + KT+ IQP A
Sbjct: 25 VPGDLIWEIVKKNNSFLVKQFGNSTAKVQFSKEPNNLYNLNSFKHSGLANKKTVSIQP-A 83
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTKRATKKTLS 94
K + V AT K +K + K KK S
Sbjct: 84 GGKDLSVVV--ATTKTKKQSKPASLYHKSLMKKEFS 117
>gi|226509046|ref|NP_001151268.1| LOC100284901 [Zea mays]
gi|194706342|gb|ACF87255.1| unknown [Zea mays]
gi|195609716|gb|ACG26688.1| 60S ribosomal protein L28 [Zea mays]
gi|195610086|gb|ACG26873.1| 60S ribosomal protein L28 [Zea mays]
gi|195645410|gb|ACG42173.1| 60S ribosomal protein L28 [Zea mays]
gi|195646860|gb|ACG42898.1| 60S ribosomal protein L28 [Zea mays]
gi|413946289|gb|AFW78938.1| 60S ribosomal protein L28 isoform 1 [Zea mays]
gi|413946290|gb|AFW78939.1| 60S ribosomal protein L28 isoform 2 [Zea mays]
gi|413946291|gb|AFW78940.1| 60S ribosomal protein L28 isoform 3 [Zea mays]
gi|413946292|gb|AFW78941.1| 60S ribosomal protein L28 isoform 4 [Zea mays]
Length = 143
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW +V+ NN++L+K N K F+KEP NL N+ SFK+SGL + KT+ IQP A
Sbjct: 4 VPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAA 63
Query: 59 DNKGFACVTKRATKK 73
+ T + K+
Sbjct: 64 KDSAVVLSTTKTKKQ 78
>gi|164661161|ref|XP_001731703.1| hypothetical protein MGL_0971 [Malassezia globosa CBS 7966]
gi|159105604|gb|EDP44489.1| hypothetical protein MGL_0971 [Malassezia globosa CBS 7966]
Length = 151
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M + L W +V+ +N++L+K + + FS+EPGN+ +L S+K+SGL++ K + I P A+N
Sbjct: 1 MSTQDLQWLLVRKSNSFLVKQKGLGRVFSREPGNVASLHSYKHSGLVNDKGVGIVP-AEN 59
Query: 61 KGFACVTKRATKKPTADNKGFACVT 85
+G T++ P A A T
Sbjct: 60 RGVIITTRKQKVSPRAIRSARAQTT 84
>gi|238007246|gb|ACR34658.1| unknown [Zea mays]
gi|413946287|gb|AFW78936.1| hypothetical protein ZEAMMB73_037814 [Zea mays]
Length = 117
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW +V+ NN++L+K N K F+KEP NL N+ SFK+SGL + KT+ IQP A
Sbjct: 4 VPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAA 63
Query: 59 DNKGFACVTKRATKKPTADNK 79
+ T + TKK A K
Sbjct: 64 KDSAVVLSTTK-TKKQNAPAK 83
>gi|357454709|ref|XP_003597635.1| 60S ribosomal protein L28-1 [Medicago truncatula]
gi|355486683|gb|AES67886.1| 60S ribosomal protein L28-1 [Medicago truncatula]
Length = 146
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMK--ADNIKK-WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V L+W +VK NN++L+K +N + FS+EP NL NL S+KYSGL + KT+ IQ
Sbjct: 4 VPGPLVWEVVKRNNSFLVKEFGNNTQSVQFSREPNNLYNLNSYKYSGLANKKTVTIQSAG 63
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTKRATKKTL 93
++ AT KP NK A + K KK
Sbjct: 64 KDQSVLL----ATTKPRKQNKPAALLHKSVMKKEF 94
>gi|195646398|gb|ACG42667.1| 60S ribosomal protein L28 [Zea mays]
Length = 143
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW +V+ NN++L+K N K F+KEP NL N+ SFK+SGL + KT+ IQP A
Sbjct: 4 VPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAA 63
Query: 59 DNKGFACVTKRATKKPTA----DNKGFACVTKRATKKTLSGHVDIGSARMD 105
+ ++ TKK A +K C R K + V R D
Sbjct: 64 KDSA-VVLSXTKTKKQNAPAKLSHKSVMCKEFRKMAKAVKNQVSDNYYRPD 113
>gi|72112300|ref|XP_789202.1| PREDICTED: 60S ribosomal protein L28-like [Strongylocentrotus
purpuratus]
gi|115765098|ref|XP_001178017.1| PREDICTED: 60S ribosomal protein L28-like [Strongylocentrotus
purpuratus]
Length = 139
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S+ L W I++NN+ +L + S EP NL N SFKY+GLIH K + ++ AD
Sbjct: 1 MASADLQWLIIRNNSCFLKHGGGV--TMSTEPNNLKNRNSFKYNGLIHKKAVGVEAAADG 58
Query: 61 KGFACVTKR 69
KG VTK+
Sbjct: 59 KGVVLVTKK 67
>gi|148226228|ref|NP_001079738.1| ribosomal protein L28 [Xenopus laevis]
gi|32450198|gb|AAH53798.1| MGC64430 protein [Xenopus laevis]
Length = 137
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W IV+N +++++K ++ + FS EP NL SF+Y+G IH KT+ ++P AD K
Sbjct: 1 MSAHLQWMIVRNCSSFIVKRNH--QVFSTEPNNLKARNSFRYNGPIHKKTVGVEPAADGK 58
Query: 62 GFACVTKR--ATKKP 74
G V K+ +KP
Sbjct: 59 GVIVVMKKRAGQRKP 73
>gi|351726256|ref|NP_001238400.1| uncharacterized protein LOC100306153 [Glycine max]
gi|255627699|gb|ACU14194.1| unknown [Glycine max]
Length = 150
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V L+W IVK NN++L+K FS+E NL NL SFKYSGL + KT+ +QP
Sbjct: 4 VPGQLVWEIVKKNNSFLVKQFGRGTQSVEFSRESNNLYNLNSFKYSGLANKKTVTVQPEG 63
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTKRATKKTLSG 95
++ AT K NK A + K KK G
Sbjct: 64 KDQAVLL----ATTKTKKQNKPAALLHKSVMKKEFRG 96
>gi|55908882|gb|AAV67825.1| putative 60S ribosomal L28 protein [Oryza sativa Japonica Group]
gi|215694857|dbj|BAG90048.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 133
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN +L+K N K F+KEP NL N+ S+K+SGL + KT+ IQP+
Sbjct: 4 VPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQPSG 63
Query: 59 DNKGFACVTKRATKKPTADNKGF 81
++ TKK A K +
Sbjct: 64 VKDAAVVLSTTKTKKQNAPAKLY 86
>gi|413946288|gb|AFW78937.1| hypothetical protein ZEAMMB73_037814 [Zea mays]
Length = 134
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW +V+ NN++L+K N K F+KEP NL N+ SFK+SGL + KT+ IQP A
Sbjct: 4 VPGDLIWQVVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAA 63
Query: 59 DNKGFACVTKRATKKPTADNK 79
+ T + TKK A K
Sbjct: 64 KDSAVVLSTTK-TKKQNAPAK 83
>gi|125541661|gb|EAY88056.1| hypothetical protein OsI_09485 [Oryza sativa Indica Group]
Length = 147
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN +L+K N K F+KEP NL N+ S+K+SGL + KT+ IQP+
Sbjct: 4 VPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQPSG 63
Query: 59 DNKGFACVTKRATKKPTADNKGF 81
++ TKK A K +
Sbjct: 64 GKDAAVVLSTTKTKKQNAPAKLY 86
>gi|132836|sp|P17702.4|RL28_RAT RecName: Full=60S ribosomal protein L28
gi|57113|emb|CAA36846.1| unnamed protein product [Rattus norvegicus]
gi|227228|prf||1617101B ribosomal protein L28
Length = 137
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++ D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEAWPDGK 58
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 59 GVVVVMKRRSGQRKP 73
>gi|222632413|gb|EEE64545.1| hypothetical protein OsJ_19397 [Oryza sativa Japonica Group]
Length = 173
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN +L+K N K F+KEP NL N+ S+K+SGL + KT+ IQP+
Sbjct: 4 VPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQPSG 63
Query: 59 DNKGFACVTKRATKKPTADNKGF 81
++ TKK A K +
Sbjct: 64 VKDAAVVLSTTKTKKQNAPAKLY 86
>gi|324517073|gb|ADY46719.1| 60S ribosomal protein L28 [Ascaris suum]
Length = 140
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
VS L W +++ ++++ + I K FS E NL + S +++GLIH K I I+PT DNK
Sbjct: 4 VSPDLQWQVIRKTSSFIRRQRGIPKHFSTEKFNLKGVNSIRFNGLIHKKAIDIRPTNDNK 63
Query: 62 GFACVTKRATKKPTADNKGFACVTKRATKKTL 93
TK TK A K+ ++K+L
Sbjct: 64 AIVISTKIRTKTSLPAKSVVAVTLKKDSRKSL 95
>gi|315113265|pdb|3IZR|BB Chain b, Localization Of The Large Subunit Ribosomal Proteins
Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
Translating 80s Ribosome
gi|55908881|gb|AAV67824.1| putative 60S ribosomal L28 protein [Oryza sativa Japonica Group]
gi|149390813|gb|ABR25424.1| 60S ribosomal protein l28 [Oryza sativa Indica Group]
Length = 147
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN +L+K N K F+KEP NL N+ S+K+SGL + KT+ IQP+
Sbjct: 4 VPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQPSG 63
Query: 59 DNKGFACVTKRATKKPTADNKGF 81
++ TKK A K +
Sbjct: 64 VKDAAVVLSTTKTKKQNAPAKLY 86
>gi|125553166|gb|EAY98875.1| hypothetical protein OsI_20825 [Oryza sativa Indica Group]
Length = 154
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN +L+K N K F+KEP NL N+ S+K+SGL + KT+ IQP+
Sbjct: 4 VPEPLIWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQPSG 63
Query: 59 DNKGFACVTKRATKKPTADNKGF 81
++ TKK A K +
Sbjct: 64 VKDAAVVLSTTKTKKQNAPAKLY 86
>gi|32187001|gb|AAP73463.1| ribosomal protein L28 [Schistosoma japonicum]
Length = 116
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHLIW+++KNN+ +LMK + FS++P NL N F+Y G +H K I I+ K
Sbjct: 1 MSSHLIWDLIKNNHCFLMKRG--PECFSRDPLNLKNKNCFRYCGPVHKKAIGIKEERYGK 58
Query: 62 GFACVTKRATKKPTADNKGFACVTK----RATKKTLS 94
G TK K D+K VT+ R ++TL
Sbjct: 59 GVVVTTKNVAK----DHKPAKAVTRTKFVRGRRRTLQ 91
>gi|242054163|ref|XP_002456227.1| hypothetical protein SORBIDRAFT_03g032450 [Sorghum bicolor]
gi|241928202|gb|EES01347.1| hypothetical protein SORBIDRAFT_03g032450 [Sorghum bicolor]
Length = 145
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V L+W IV+ NN++L+K N K FSKEP NL N+ S+K+SGL + KT+ +QP +
Sbjct: 4 VPDSLVWQIVRKNNSFLIKQFGNGNAKVQFSKEPNNLYNVHSYKHSGLANKKTVTVQPAS 63
Query: 59 DNKGFACVTKRATKK 73
+ ++ TKK
Sbjct: 64 GKEAAVVLSTTKTKK 78
>gi|59895928|gb|AAX11340.1| ribosomal protein L28 [Haliotis asinina]
Length = 135
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 8/96 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W I++NN+++L+K + S + NL + SF+Y+GLI KT+ ++P D K
Sbjct: 1 MSADLQWMIIRNNSSFLLKRPGL--TISTKKNNLKGINSFRYNGLIRKKTVGVEPAKDGK 58
Query: 62 GFACVTKRAT--KKPTADNKGFACVT-KRATKKTLS 94
G VT+ +T +KP NK F V KR ++T +
Sbjct: 59 GVVLVTRNSTGGRKP---NKSFTRVELKRDPRRTFA 91
>gi|256052645|ref|XP_002569870.1| 60S ribosomal protein L28 [Schistosoma mansoni]
gi|360044282|emb|CCD81829.1| putative 60s ribosomal protein L28 [Schistosoma mansoni]
Length = 134
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SSHL+W+++K+N+ +LMK ++ FS++P NL F+Y GL+H K I I+ K
Sbjct: 1 MSSHLVWDLIKHNHCFLMKRG--RERFSRDPLNLKGKNCFRYCGLVHKKAIGIKEEKYGK 58
Query: 62 GFACVTKRATKKPTADNKGFACVTK 86
G +TK K D+K VT+
Sbjct: 59 GVVVITKNVAK----DHKPAKAVTR 79
>gi|296810106|ref|XP_002845391.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238842779|gb|EEQ32441.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 157
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK-WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS L+W I + NAYL+K N FS++P NL N S KY+G ++SK I IQ TA+N
Sbjct: 9 VSDDLVWGIARTQNAYLVKRKNGGGVQFSRDPLNLVNKHSRKYAGFVNSKAIGIQ-TAEN 67
Query: 61 KGFACVTKR 69
G A TKR
Sbjct: 68 GGVAVTTKR 76
>gi|318037240|ref|NP_001187053.1| ribosomal protein L28 [Ictalurus punctatus]
gi|15293925|gb|AAK95155.1|AF401583_1 ribosomal protein L28 [Ictalurus punctatus]
gi|308322257|gb|ADO28266.1| 60S ribosomal protein l28 [Ictalurus furcatus]
gi|308323297|gb|ADO28785.1| 60S ribosomal protein l28 [Ictalurus punctatus]
Length = 137
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+HL W +++NN+++L+K + + +S EP NL +F+++GLIH KT+ ++ AD K
Sbjct: 1 MSAHLQWMVIRNNSSFLIKRNG--QTYSTEPNNLKARNAFRFNGLIHRKTVGVEQAADGK 58
Query: 62 GFACVTKR 69
G + K+
Sbjct: 59 GVVIILKK 66
>gi|76573317|gb|ABA46763.1| unknown [Solanum tuberosum]
Length = 143
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V L+W IVK NN++L+K + FSKEP NL NL S+K+SGL + KT+ IQP
Sbjct: 4 VPGQLVWEIVKKNNSFLVKEFGNGSAGVVFSKEPNNLCNLHSYKHSGLANKKTVTIQPEG 63
Query: 59 DNKGFACVTKRATKK 73
+K T + K+
Sbjct: 64 KDKSVLLATSKTKKQ 78
>gi|392598000|gb|EIW87322.1| ribosomal protein L28e [Coniophora puteana RWD-64-598 SS2]
Length = 147
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W +++N N+YL+K FS+EPGNL NL S+KYSGL + K I I + +
Sbjct: 1 MSSDLQWYLIRNYNSYLVKKVPEGPIFSREPGNLRNLHSYKYSGLANKKAIDISDSGN-- 58
Query: 62 GFACVTKRATKKPTADNKGFACVTKR 87
G TK+ P A T R
Sbjct: 59 GIKITTKKTKSSPQAVRGSLTSTTIR 84
>gi|169776889|ref|XP_001822910.1| 60S ribosomal protein L28e [Aspergillus oryzae RIB40]
gi|238493968|ref|XP_002378220.1| 60S ribosomal protein L28 [Aspergillus flavus NRRL3357]
gi|83771647|dbj|BAE61777.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694870|gb|EED51213.1| 60S ribosomal protein L28 [Aspergillus flavus NRRL3357]
gi|391871243|gb|EIT80405.1| 60S ribosomal protein [Aspergillus oryzae 3.042]
Length = 157
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIK-KWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VSS L+W + +N NA+L+K ++ FS++P NL N SFKY+G ++K I +QPT +N
Sbjct: 8 VSSDLVWQLTRNQNAFLVKRNSGGGSQFSRDPLNLQNKHSFKYAGYANTKAIGVQPT-EN 66
Query: 61 KGFACVTKRA 70
G +TK++
Sbjct: 67 GGVVVLTKKS 76
>gi|160948284|emb|CAO94743.1| putative ribosomal protein L28 [Pomphorhynchus laevis]
Length = 117
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 6 LIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFAC 65
L W ++K NN +L K + IK S+E GNL N +K++GL+H+K+I IQP A K
Sbjct: 1 LQWQLIKFNNCFLEKQNGIK--LSRERGNLTNRHGYKWNGLVHNKSIDIQPNATCKSGVT 58
Query: 66 VTKRATKKPTADNKGFA---CVTKRATKKTLSGHVDIGSARMD 105
+ R ++ N+ C R T K++ + G R D
Sbjct: 59 LKLRKRQRNKVSNQYIQINLCKNSRQTLKSVRRLISHGKYRQD 101
>gi|193872598|gb|ACF23027.1| ST45-109 [Eutrema halophilum]
Length = 143
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN +L+K N K FSKE NL NL S+K+SGL + KT+ IQP
Sbjct: 4 VPGQLIWEIVKTNNCFLVKQFGRGNAKVQFSKESNNLCNLNSYKHSGLANKKTVTIQPAD 63
Query: 59 DNKGFACVTKRATKK 73
+ T + K+
Sbjct: 64 KEQAVVLATTKTKKQ 78
>gi|332226596|ref|XP_003262476.1| PREDICTED: 60S ribosomal protein L28-like [Nomascus leucogenys]
Length = 137
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S HL W +V+N +++L+K + K+ +S EP NL SF Y+GLIH KT+ ++P AD K
Sbjct: 1 MSVHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFCYNGLIHHKTVGMEPAADGK 58
Query: 62 GFACVTKR 69
G V K+
Sbjct: 59 GVMVVIKQ 66
>gi|269146872|gb|ACZ28382.1| ribosomal protein L28e-like protein [Simulium nigrimanum]
Length = 115
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 28 FSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKRATK 72
FSKEP NL NL SF+Y+G +H KT+ I P DNKGF V KR +K
Sbjct: 3 FSKEPNNLTNLNSFRYNGFVHKKTLGIVPAKDNKGFNVVYKRQSK 47
>gi|116779158|gb|ABK21163.1| unknown [Picea sitchensis]
gi|116780991|gb|ABK21915.1| unknown [Picea sitchensis]
gi|116785203|gb|ABK23632.1| unknown [Picea sitchensis]
gi|116790788|gb|ABK25740.1| unknown [Picea sitchensis]
gi|148907233|gb|ABR16756.1| unknown [Picea sitchensis]
Length = 149
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 5 HLIWNIVKNNNAYLMKAD---NIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
L+W IVK NN +L+K + + K FS+EP NL NL ++KYSGL ++KTI I P A
Sbjct: 7 QLLWEIVKKNNCFLVKQNGNSSAKVQFSREPNNLYNLHTYKYSGLANNKTISITPAAGED 66
Query: 62 GFACVTKRATKKP--TADNKGFACVTK--RATKKTLSGHVDIGSARMD 105
V TKK AD+ + + K R + ++ VD R D
Sbjct: 67 LAVVVATTKTKKQHKPADSVHRSVLKKEFRKMARHVANQVDENYYRRD 114
>gi|384246847|gb|EIE20336.1| ribosomal protein L28e [Coccomyxa subellipsoidea C-169]
Length = 150
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S L+W +VKN N +L K N + FS EPGNL NL S+KYSG+ + K +H++ A
Sbjct: 22 MAPSQLVWQLVKNYNCFLHKGLNGSQ-FSAEPGNLYNLNSYKYSGIANEKIVHVE--AAE 78
Query: 61 KGFACVTKRATK----------KPTADNKGFACVTKRATKKTLSGHVDIGSARM 104
+G VT+ K K T NK F R K+ + D+ A +
Sbjct: 79 EGSFAVTRNIPKNSNKPRDSRSKATKKNKNFRRAAIRLGKEVHTVRPDLKKAAL 132
>gi|223994675|ref|XP_002287021.1| RL28, ribosomal protein 28 60S large ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
gi|220978336|gb|EED96662.1| RL28, ribosomal protein 28 60S large ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
Length = 134
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKW-----FSKEPGNLPNLASFKYSGLIHSKTIHIQP 56
+S L W +VK NN+++ K + FS E GNL + +S+KYSGL SKTI I P
Sbjct: 4 ISDSLAWELVKRNNSFMRKKSGSTRRSGAVTFSVERGNLVSKSSYKYSGLASSKTIDISP 63
Query: 57 TADNKGFACVTKRATKKPTADNKGFACV 84
T DN+ A +T + K T+ G A +
Sbjct: 64 TDDNR--ASLTLKTKKAGTSGKSGKASI 89
>gi|312071422|ref|XP_003138601.1| hypothetical protein LOAG_03016 [Loa loa]
gi|307766238|gb|EFO25472.1| ribosomal protein L28e [Loa loa]
Length = 141
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
MVS+ + W +++ +++L + I K FS+E N+ + S +++GL+H K + IQ D
Sbjct: 1 MVSADIQWQVIRKTSSFLRRQRGIPKHFSRERFNIKGVNSIRFNGLVHKKGLDIQAAPDG 60
Query: 61 KGFACVTKRATKKPTADNKGFACVTKRATKKTLSGHVDIGSARMDARLY-IFEMGL 115
KG K+ TK + K+ ++K+L S R AR Y I GL
Sbjct: 61 KGIVVTMKKRTKNSFPTKSSVSITLKKNSRKSLK------SVRNIARSYRIAHRGL 110
>gi|48716267|dbj|BAD22882.1| putative 60S ribosomal protein L28 [Oryza sativa Japonica Group]
gi|48716509|dbj|BAD23114.1| putative 60S ribosomal protein L28 [Oryza sativa Japonica Group]
gi|125584181|gb|EAZ25112.1| hypothetical protein OsJ_08908 [Oryza sativa Japonica Group]
Length = 147
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V L W IVK NN +L+K N K F+KEP NL N+ S+K+SGL + KT+ IQP+
Sbjct: 4 VPEPLFWEIVKKNNCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQPSG 63
Query: 59 DNKGFACVTKRATKKPTADNKGF 81
++ TKK A K +
Sbjct: 64 GKDAAVVLSTTKTKKQNAPAKLY 86
>gi|192908658|gb|ACF06437.1| ribosomal L28-like protein [Elaeis guineensis]
Length = 148
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NNA+L+K N FSKEP NL N+ S+K+SGL + KT+ IQP
Sbjct: 4 VPGPLIWEIVKRNNAFLVKQFGNGNAMVQFSKEPNNLYNVNSYKHSGLANKKTVAIQPGG 63
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTKRATKK 91
+ T + K+ N V K+ +K
Sbjct: 64 KDLSVVLATSKTKKQNKPGNLYNRSVMKKEFRK 96
>gi|15233567|ref|NP_194670.1| 60S ribosomal protein L28-2 [Arabidopsis thaliana]
gi|145334179|ref|NP_001078470.1| 60S ribosomal protein L28-2 [Arabidopsis thaliana]
gi|75181446|sp|Q9M0E2.1|RL282_ARATH RecName: Full=60S ribosomal protein L28-2
gi|7269839|emb|CAB79699.1| putative protein [Arabidopsis thaliana]
gi|18252205|gb|AAL61935.1| putative protein [Arabidopsis thaliana]
gi|21593876|gb|AAM65843.1| putative ribosomal protein L28 [Arabidopsis thaliana]
gi|23197678|gb|AAN15366.1| putative protein [Arabidopsis thaliana]
gi|332660227|gb|AEE85627.1| 60S ribosomal protein L28-2 [Arabidopsis thaliana]
gi|332660228|gb|AEE85628.1| 60S ribosomal protein L28-2 [Arabidopsis thaliana]
Length = 143
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN +L+K N K FSKE NL N+ S+K+SGL + KT+ IQ
Sbjct: 4 VPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQAAG 63
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTKRATKKTLS 94
++G T K NK V K KK S
Sbjct: 64 KDQGVVL----GTTKTKRQNKPKLSVNKSILKKEFS 95
>gi|388522863|gb|AFK49493.1| unknown [Medicago truncatula]
Length = 143
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMK--ADNIKK-WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN++L+K +N + FS+E NL NL S+K+SGL + KT+ IQP
Sbjct: 4 VPGPLIWEIVKKNNSFLVKEFGNNTQSVQFSRESNNLYNLNSYKFSGLANKKTVTIQPAG 63
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTKRATKKTL 93
++ AT KP NK A K KK
Sbjct: 64 KDQSVLL----ATTKPRKQNKPSALSHKSIMKKEF 94
>gi|351722416|ref|NP_001238011.1| uncharacterized protein LOC100499921 [Glycine max]
gi|255627703|gb|ACU14196.1| unknown [Glycine max]
Length = 150
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 VSSHLIWNIVKNNNAYLMK-----ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQP 56
V L+W IVK NN++L+K +++ FS+E NL NL SFKYSGL + KT+ +QP
Sbjct: 4 VPGQLVWEIVKKNNSFLVKQFGRGTQSVE--FSRESNNLYNLNSFKYSGLANKKTVTVQP 61
Query: 57 TADNKGFACVTKRATK--KPTA 76
++ T + K KP A
Sbjct: 62 EGKDQAVLLATTKTKKQNKPAA 83
>gi|297836286|ref|XP_002886025.1| 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]
gi|297331865|gb|EFH62284.1| 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]
Length = 143
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVKNNN +L+K N K FSKE NL N+ S+K+SGL + KT+ IQ A
Sbjct: 4 VPGQLIWEIVKNNNCFLVKQFGRGNSKVLFSKETNNLANVHSYKHSGLANKKTVTIQ--A 61
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTKRATKK 91
+K A V AT K NK V K KK
Sbjct: 62 ADKEQAVVL--ATTKTKKQNKPKVSVNKSILKK 92
>gi|388494168|gb|AFK35150.1| unknown [Lotus japonicus]
Length = 150
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V L+W IVK NN++L+K FS+E NL NL SFK+SGL + KT+ IQP+
Sbjct: 4 VPGQLVWEIVKKNNSFLVKEFGRGTQSVEFSRESNNLFNLNSFKHSGLANKKTVTIQPSG 63
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTKRATKKTLS 94
++ AT K NK A + K KK S
Sbjct: 64 KDQSVLL----ATTKTKKQNKPAALLHKSVMKKEFS 95
>gi|156390843|ref|XP_001635479.1| predicted protein [Nematostella vectensis]
gi|156222573|gb|EDO43416.1| predicted protein [Nematostella vectensis]
Length = 137
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W+I++NN+ +L+++ K +KEP N+ L +FKY+GL++ K + + K
Sbjct: 1 MSSDLQWSIIRNNSCFLVRSQG--KTLTKEPNNVTGLNAFKYNGLVNKKVVGVDAAPSGK 58
Query: 62 GFACVTK--RATKKPTAD-NKGFACVTKRATKKTLSGHVDIGSARMD 105
G T+ +A KP NK R T KT+ G D RMD
Sbjct: 59 GVVITTRKNKAANKPGKIMNKITISRDSRRTLKTIEGVCDKNYYRMD 105
>gi|405953981|gb|EKC21535.1| 60S ribosomal protein L28 [Crassostrea gigas]
Length = 398
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S L W I++NN+++L+K + + +S+E NL + SF+Y+GL++ +T+ + P D
Sbjct: 264 MASPDLQWLIIRNNSSFLLKGNG--QTYSREQNNLKSKNSFRYNGLVNRQTVGVVPAKDG 321
Query: 61 KGFACVTK--RATKKPTADNKGFACVTKRATKKTLS 94
KG VTK +A K+P + KR +++T S
Sbjct: 322 KGVVLVTKKSKAGKRPGSSYNKVEL--KRGSRQTFS 355
>gi|389632401|ref|XP_003713853.1| ribosomal protein L28e [Magnaporthe oryzae 70-15]
gi|351646186|gb|EHA54046.1| ribosomal protein L28e [Magnaporthe oryzae 70-15]
gi|440473353|gb|ELQ42156.1| hypothetical protein OOU_Y34scaffold00228g47 [Magnaporthe oryzae
Y34]
gi|440489424|gb|ELQ69080.1| hypothetical protein OOW_P131scaffold00195g47 [Magnaporthe oryzae
P131]
Length = 151
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKAD-NIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS+ LIW +V+N NA+L K + N FS++P NL N S KY+G ++ K I +Q +++
Sbjct: 4 VSADLIWEVVRNQNAFLEKRNTNGGVQFSRDPLNLTNKHSRKYAGFVNDKAIGVQASSNE 63
Query: 61 KGFACVTKRATKKPTADNKGFACVT 85
KG +T +KK A NK + T
Sbjct: 64 KGGVAIT---SKKAGAGNKPASSQT 85
>gi|397587168|gb|EJK53834.1| hypothetical protein THAOC_26649 [Thalassiosira oceanica]
Length = 156
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 11/82 (13%)
Query: 6 LIWNIVKNNNAYLMK-------ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
L+W +VKNNN+++ K + +I+ FS E GNL N +S+KYSGL +SKTI I
Sbjct: 8 LVWELVKNNNSFMRKKSGRTSRSGSIR--FSVERGNLTNKSSYKYSGLANSKTIDISSVG 65
Query: 59 DNKGFACVTKRATKKPTADNKG 80
DNK A +T + K T+ G
Sbjct: 66 DNK--AALTLKTKKAATSGKSG 85
>gi|15224835|ref|NP_179563.1| 60S ribosomal protein L28-1 [Arabidopsis thaliana]
gi|79322493|ref|NP_001031374.1| 60S ribosomal protein L28-1 [Arabidopsis thaliana]
gi|145329182|ref|NP_001077920.1| 60S ribosomal protein L28-1 [Arabidopsis thaliana]
gi|75100554|sp|O82204.1|RL281_ARATH RecName: Full=60S ribosomal protein L28-1
gi|3687251|gb|AAC62149.1| putative ribosomal protein L28 [Arabidopsis thaliana]
gi|15292671|gb|AAK92704.1| putative ribosomal protein L28 [Arabidopsis thaliana]
gi|19310757|gb|AAL85109.1| putative ribosomal protein L28 [Arabidopsis thaliana]
gi|330251824|gb|AEC06918.1| 60S ribosomal protein L28-1 [Arabidopsis thaliana]
gi|330251825|gb|AEC06919.1| 60S ribosomal protein L28-1 [Arabidopsis thaliana]
gi|330251826|gb|AEC06920.1| 60S ribosomal protein L28-1 [Arabidopsis thaliana]
Length = 143
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVKNNN +L+K N K FSKE NL N+ S+K+SGL + KT+ IQ A
Sbjct: 4 VPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ--A 61
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTKRATKK 91
+K A V AT K NK V K KK
Sbjct: 62 ADKDQAVVL--ATTKTKKQNKPKLSVNKSILKK 92
>gi|358375677|dbj|GAA92256.1| 60S ribosomal protein L28 [Aspergillus kawachii IFO 4308]
Length = 153
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIK-KWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VSS LIW + + NAYL+K ++ FS++P NL N SFKY+G ++K + +Q T +N
Sbjct: 5 VSSDLIWQLTRTQNAYLVKRNSGGGSQFSRDPLNLQNKHSFKYAGYANTKAVGVQAT-EN 63
Query: 61 KGFACVTKRATKKPTADNKGFACVT---KRATKKTLSGHVD 98
G A +TK+ + P K VT +T+K G D
Sbjct: 64 GGVAVITKKPS-NPQQPAKNVVTVTYGPNASTRKIYKGVAD 103
>gi|409052207|gb|EKM61683.1| hypothetical protein PHACADRAFT_248441 [Phanerochaete carnosa
HHB-10118-sp]
Length = 142
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S L W +++ NN++++K FS+E NL N+ SFKYSGL + KTI I P+A
Sbjct: 1 MSDDLQWLLLRKNNSFIVKRAAEGPVFSREAANLTNIHSFKYSGLANKKTIAITPSAA-- 58
Query: 62 GFACVTKRATKKPTADNKGFACVTKR 87
G VT++ P K +A T R
Sbjct: 59 GVQIVTRKKGASPHTVKKAYATSTIR 84
>gi|328769043|gb|EGF79088.1| hypothetical protein BATDEDRAFT_35560 [Batrachochytrium
dendrobatidis JAM81]
Length = 138
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S + W I + N+ +L+K + I+ S+EPGNL NL SFKYSG++ K + I +A
Sbjct: 1 MASPDIAWLITRKNSCFLVKRNGIR--LSREPGNLRNLHSFKYSGIVGKKVVDISASA-- 56
Query: 61 KGFACVTKRAT---KKPTA 76
KG A K+ T KP+A
Sbjct: 57 KGVAITRKKTTVSCAKPSA 75
>gi|255546219|ref|XP_002514169.1| 60S ribosomal protein L28, putative [Ricinus communis]
gi|223546625|gb|EEF48123.1| 60S ribosomal protein L28, putative [Ricinus communis]
Length = 144
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN++L+K N FSKE NL NL S+K+SGL + KT+ IQP
Sbjct: 4 VPGQLIWEIVKTNNSFLVKEFGRGNASVQFSKESNNLYNLNSYKHSGLANKKTVSIQPGG 63
Query: 59 DNKGFACVTKRATKK 73
+ T + K+
Sbjct: 64 KDLSVVLATTKTKKQ 78
>gi|297799052|ref|XP_002867410.1| 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]
gi|297313246|gb|EFH43669.1| 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]
Length = 143
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN +L+K N K FSKE NL N+ S+K+SGL + KT+ IQ
Sbjct: 4 VPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKETNNLVNINSYKHSGLANKKTVTIQAAD 63
Query: 59 DNKGFA---CVTKRATKKPTADNKG-----FACVTKRATKKTLSGHV--DIGSARMDARL 108
++G TKR K + NK F +TK + + + D+ A + ARL
Sbjct: 64 KDQGVVLGTTKTKRQNKPKLSVNKSVLKKEFPRMTKAVANQVVDNYYRPDLKKAAL-ARL 122
Query: 109 YIFEMGLMSA 118
GL A
Sbjct: 123 SAISKGLRVA 132
>gi|452818596|gb|EME25862.1| 60S ribosomal protein L28e [Galdieria sulphuraria]
Length = 141
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 4 SHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGF 63
S L+W +VK +NA+ ++ + S E GNL + SFKYSGL SK + IQP + G
Sbjct: 2 SELMWLLVKGHNAFQIRRKGV--TLSTEKGNLKGINSFKYSGLAQSKAVDIQPATETSGI 59
Query: 64 ACVTKRATK 72
A KR K
Sbjct: 60 AYSKKRTKK 68
>gi|170084661|ref|XP_001873554.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651106|gb|EDR15346.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 144
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W +++ NN++++K FSKEPGNL N+ S+KYSGL +SK + + +++
Sbjct: 1 MSSDLQWLLLRGNNSFIVKRVPEGPIFSKEPGNLRNIHSYKYSGLANSKVVDV---SESA 57
Query: 62 GFACVTKRATK-KPTADNKGFACVTKR 87
G ++ R TK P A N A T R
Sbjct: 58 GTVKISTRKTKASPRAVNPATATSTIR 84
>gi|403287207|ref|XP_003934844.1| PREDICTED: 60S ribosomal protein L28-like [Saimiri boliviensis
boliviensis]
Length = 173
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S HL W +V+N ++ L++ + K+ S P NL SF+Y GLIH KT+ + P AD +
Sbjct: 37 MSMHLQWMVVRNCSSLLIEGN--KQIRSTGPNNLEARNSFRYGGLIHRKTVGVAPAADGR 94
Query: 62 GFACVTKRAT--KKPTADNKGFACVTKRATKKT 92
G V KR + +KP +CV +K T
Sbjct: 95 GVVLVMKRRSGQRKPAT-----SCVQTTISKNT 122
>gi|115439475|ref|NP_001044017.1| Os01g0706500 [Oryza sativa Japonica Group]
gi|113533548|dbj|BAF05931.1| Os01g0706500 [Oryza sativa Japonica Group]
gi|125571749|gb|EAZ13264.1| hypothetical protein OsJ_03190 [Oryza sativa Japonica Group]
Length = 145
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
+ L+W +VK NN++L+K N K FSKEP NL N+ S+K+SGL + KT+ +QP +
Sbjct: 4 IPDSLVWELVKKNNSFLVKQFGNGNAKVQFSKEPNNLYNVHSYKHSGLANKKTVTVQPAS 63
Query: 59 DNKGFACVTKRATKK 73
+ ++ T+K
Sbjct: 64 GKETAVVLSTTKTEK 78
>gi|449446572|ref|XP_004141045.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 1 [Cucumis
sativus]
gi|449446574|ref|XP_004141046.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 2 [Cucumis
sativus]
Length = 149
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V L+W IVK N+++L+K N FSKEP NL NL S+K+SGL + KT+ IQP
Sbjct: 4 VPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQPGG 63
Query: 59 DNKGFACVTKRATKK 73
+ T + K+
Sbjct: 64 KDLSVLLATSKTKKQ 78
>gi|388493460|gb|AFK34796.1| unknown [Lotus japonicus]
gi|388499432|gb|AFK37782.1| unknown [Lotus japonicus]
Length = 150
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
+ L+W IVK NN++L+K FS+EP NL NL +FKYSGL + KT+ IQ
Sbjct: 4 IPGQLVWEIVKRNNSFLVKEFGNGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTIQAAG 63
Query: 59 DNKGFACVTKRATK--KPTA 76
++ T ++ K KP A
Sbjct: 64 KDQSVLLGTTKSKKETKPAA 83
>gi|449488009|ref|XP_004157911.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 1 [Cucumis
sativus]
gi|449488011|ref|XP_004157912.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 2 [Cucumis
sativus]
Length = 118
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V L+W IVK N+++L+K N FSKEP NL NL S+K+SGL + KT+ IQP
Sbjct: 4 VPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQPGG 63
Query: 59 DNKGFACVTKRATKK 73
+ T + K+
Sbjct: 64 KDLSVLLATSKTKKQ 78
>gi|89258491|gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]
Length = 150
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW +VK NN +L+K FSKEP NL N+ S+K+SGL + KT+ IQP
Sbjct: 4 VPGQLIWEVVKRNNCFLVKQFGRGTAGVRFSKEPNNLYNVNSYKHSGLANKKTVTIQPAG 63
Query: 59 DNKGFACVTKRATK--KPTA 76
++ T ++ K KP++
Sbjct: 64 KDQSVLLATTKSKKQNKPSS 83
>gi|70984072|ref|XP_747557.1| 60S ribosomal protein L28 [Aspergillus fumigatus Af293]
gi|66845184|gb|EAL85519.1| 60S ribosomal protein L28 [Aspergillus fumigatus Af293]
gi|159122342|gb|EDP47463.1| 60S ribosomal protein L28 [Aspergillus fumigatus A1163]
Length = 157
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKA-DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VSS L+W I +N NA+L+K FS++P NL N SFKY+G ++K + +Q T +N
Sbjct: 8 VSSDLVWQITRNQNAFLVKRRTGGGSQFSRDPLNLQNKQSFKYAGYANTKAVGVQAT-EN 66
Query: 61 KGFACVTKR 69
G +TK+
Sbjct: 67 GGVVVITKK 75
>gi|169845477|ref|XP_001829458.1| hypothetical protein CC1G_00637 [Coprinopsis cinerea
okayama7#130]
gi|116509523|gb|EAU92418.1| hypothetical protein CC1G_00637 [Coprinopsis cinerea
okayama7#130]
Length = 144
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S L W +++ +N++++K FS+EPGNL NL SFKYSGL ++KTI + +
Sbjct: 1 MSQDLQWLLLRKSNSFVVKGVPGGPTFSREPGNLRNLHSFKYSGLANAKTIDVSDSGS-- 58
Query: 62 GFACVTKRATKKPTADNKGFA 82
G T++ P A +K +A
Sbjct: 59 GIVISTRKTKASPHAVSKAYA 79
>gi|115398486|ref|XP_001214832.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191715|gb|EAU33415.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 154
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIK-KWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VSS LIW I + NAYL+K ++ FS++P NL N SFKY+G ++K + +Q T +N
Sbjct: 5 VSSDLIWQITRTQNAYLVKRNSGGGSQFSRDPLNLQNKHSFKYAGYANTKAVGVQAT-EN 63
Query: 61 KGFACVTKR 69
G A ++K+
Sbjct: 64 GGVAVLSKK 72
>gi|302853012|ref|XP_002958023.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox
carteri f. nagariensis]
gi|300256601|gb|EFJ40863.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox
carteri f. nagariensis]
Length = 125
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKW-FSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
+SS L+W +VK +N+++ K +K FS EPGNL N S+K+SGL ++K + IQ DN
Sbjct: 1 MSSQLVWEVVKKHNSFMRKG--VKGLVFSAEPGNLYNKHSYKFSGLANTKVVDIQAEGDN 58
Query: 61 KGFACVTKRATKKP 74
F+ + ++P
Sbjct: 59 VKFSVGRVKTAQQP 72
>gi|449458189|ref|XP_004146830.1| PREDICTED: 60S ribosomal protein L28-2-like isoform 1 [Cucumis
sativus]
gi|449458191|ref|XP_004146831.1| PREDICTED: 60S ribosomal protein L28-2-like isoform 2 [Cucumis
sativus]
gi|449476678|ref|XP_004154804.1| PREDICTED: 60S ribosomal protein L28-2-like isoform 1 [Cucumis
sativus]
gi|449476681|ref|XP_004154805.1| PREDICTED: 60S ribosomal protein L28-2-like isoform 2 [Cucumis
sativus]
Length = 148
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN++L+K FSKE NL NL S+K+SGL + KT+ IQP
Sbjct: 4 VPGQLIWEIVKRNNSFLVKEFGRGTAGVQFSKEANNLYNLNSYKHSGLANKKTVTIQPGG 63
Query: 59 DNKGFACVTKRATK--KPTA 76
++ T ++ K KP++
Sbjct: 64 KDQSILLATTKSKKQNKPSS 83
>gi|440632564|gb|ELR02483.1| ribosomal protein L28e [Geomyces destructans 20631-21]
Length = 157
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPT-AD 59
+VS LIW + ++ NAY++K ++ FS++P NL NL S K+ G +++K + I P D
Sbjct: 9 LVSDDLIWEVARSQNAYIVKRKGVQ--FSRDPLNLVNLHSRKHGGFVNTKAVGIAPAEGD 66
Query: 60 NKGFACVTKRA--TKKPTA 76
G +TK+A ++P A
Sbjct: 67 KGGVTLITKKAGNAQRPAA 85
>gi|145250067|ref|XP_001396547.1| 60S ribosomal protein L28e [Aspergillus niger CBS 513.88]
gi|134082058|emb|CAK42177.1| unnamed protein product [Aspergillus niger]
gi|350636039|gb|EHA24399.1| hypothetical protein ASPNIDRAFT_200417 [Aspergillus niger ATCC
1015]
Length = 153
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIK-KWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VSS LIW + + NA+L+K ++ FS++P NL N SFKY+G ++K + +Q T +N
Sbjct: 5 VSSDLIWQLTRTQNAFLVKRNSGGGSQFSRDPLNLQNKHSFKYAGYANTKAVGVQAT-EN 63
Query: 61 KGFACVTKRATKKPTADNKGFACVT---KRATKKTLSGHVD 98
G A +TK+ + P K VT +T+K G D
Sbjct: 64 GGVAVITKKPS-NPQQPAKNVVTVTYGPNASTRKIYKGVAD 103
>gi|449488013|ref|XP_004157913.1| PREDICTED: 60S ribosomal protein L28-1-like isoform 3 [Cucumis
sativus]
Length = 108
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V L+W IVK N+++L+K N FSKEP NL NL S+K+SGL + KT+ IQP
Sbjct: 4 VPGQLVWEIVKKNSSFLVKEFGRGNASVQFSKEPNNLYNLNSYKHSGLANRKTVTIQPGG 63
Query: 59 DNKGFACVTKRATKK 73
+ T + K+
Sbjct: 64 KDLSVLLATSKTKKQ 78
>gi|358341963|dbj|GAA49532.1| large subunit ribosomal protein L28e, partial [Clonorchis
sinensis]
Length = 57
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPT 57
+SSHL+W++VK NN LMK N + FS++P N+ F YSGL+H K I I+P
Sbjct: 1 MSSHLVWDLVKRNNCLLMKRGN--EQFSRDPLNMKGKNCFMYSGLVHKKAIGIKPE 54
>gi|168000679|ref|XP_001753043.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695742|gb|EDQ82084.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 138
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Query: 2 VSSHLIWNIVKNNNAYLMKAD---NIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
VS LIW +VKN+N +L+K + N FS EP NL NL +FKYSGL + KT+ I P
Sbjct: 4 VSDDLIWLLVKNSNRFLVKRNGNNNNSVTFSSEPNNLYNLNTFKYSGLANKKTVAIAPA- 62
Query: 59 DNKGFACV-TKRATKK 73
+G + V T TKK
Sbjct: 63 --EGLSVVLTTTKTKK 76
>gi|259480066|tpe|CBF70859.1| TPA: 60S ribosomal protein L28 (AFU_orthologue; AFUA_6G05200)
[Aspergillus nidulans FGSC A4]
Length = 157
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK-WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VSS L+W + +N NAYL+K + FS++P N+ N SFKY+G ++K I +Q T +N
Sbjct: 8 VSSDLVWQLTRNQNAYLVKRNTHGGVQFSRDPLNVLNKHSFKYAGYSNTKAIGVQAT-EN 66
Query: 61 KGFACVTKR--ATKKPTADNKGFACVT 85
G +TK+ +++P K A VT
Sbjct: 67 GGVVTITKKPGTSQQPA---KSLAVVT 90
>gi|121703524|ref|XP_001270026.1| 60S ribosomal protein L28 [Aspergillus clavatus NRRL 1]
gi|119398170|gb|EAW08600.1| 60S ribosomal protein L28 [Aspergillus clavatus NRRL 1]
Length = 157
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIK-KWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VSS LIW I ++ NA+L+K FS++P NL N SFKY+G ++K + +Q T +N
Sbjct: 8 VSSDLIWQITRSQNAFLVKRRTAGGSQFSRDPLNLQNKQSFKYAGYANTKAVGVQAT-EN 66
Query: 61 KGFACVTKRA 70
G +TK++
Sbjct: 67 GGVILITKKS 76
>gi|347309782|gb|AEO79201.1| 60S ribosomal protein L28 [Hymenolepis microstoma]
Length = 134
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
++SHL W +VKN + YLMK + FS++P NL FKY GL+H K + I+ K
Sbjct: 1 MASHLNWMLVKNTHCYLMKRKG--EQFSRDPLNLKGKNCFKYCGLVHKKAMGIKQEKGGK 58
Query: 62 GFACVTKRA 70
G +TK+A
Sbjct: 59 GVYFLTKKA 67
>gi|388500342|gb|AFK38237.1| unknown [Medicago truncatula]
Length = 143
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMK--ADNIKK-WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN++L+K +N + FS+E NL NL S+K+SGL + KT+ IQ
Sbjct: 4 VPGPLIWEIVKKNNSFLVKEFGNNTQSVQFSRESNNLYNLNSYKFSGLANKKTVTIQSAG 63
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTKRATKKTL 93
++ AT KP NK A K KK
Sbjct: 64 KDQSVLL----ATTKPRKQNKPSALSHKSIMKKEF 94
>gi|346469967|gb|AEO34828.1| hypothetical protein [Amblyomma maculatum]
Length = 141
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W IVK+ +++L+K IK WFS +P N + +YSG + K + I+P K
Sbjct: 1 MSAELQWMIVKDRSSFLVKKRMIKTWFSIDPLNPKGTHAKRYSGTVRDKALTIEPDISGK 60
Query: 62 GFACVTKRAT--KKPTA--DNKGFACVTKR---ATKKTLSGH 96
G + V KR KKP D F +R + KK + GH
Sbjct: 61 GVSLVYKRQANRKKPAKLIDRVSFKHGARRTMSSIKKWVKGH 102
>gi|340518598|gb|EGR48839.1| hypothetical protein TRIREDRAFT_33692 [Trichoderma reesei QM6a]
Length = 147
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 17/123 (13%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
+SS LIW +V+ NN+YL K A N FS++P NL N+ S KY+G ++ K + + P
Sbjct: 4 ISSDLIWEVVRTNNSYLHKTGAARNGGVQFSRDPLNLKNVHSRKYAGFVNDKAVGVLP-- 61
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTK---------RATKKTLSGHVDIGSARMDARLY 109
+ KG + TKKP A + V K R T K ++ V R D R
Sbjct: 62 NEKGGVVLV---TKKPAAVTQPSKSVAKTTIGGGKSTRKTYKAVASQVAKTGYRPDLRAA 118
Query: 110 IFE 112
E
Sbjct: 119 AVE 121
>gi|225429456|ref|XP_002277207.1| PREDICTED: 60S ribosomal protein L28-1 [Vitis vinifera]
gi|147818792|emb|CAN67280.1| hypothetical protein VITISV_021592 [Vitis vinifera]
gi|296081615|emb|CBI20620.3| unnamed protein product [Vitis vinifera]
Length = 144
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN++L+K K FSKE NL N+ SFK+SGL + KT+ IQP
Sbjct: 4 VPGPLIWEIVKKNNSFLVKEFGNGTAKVQFSKETNNLCNVHSFKHSGLANRKTVTIQPGG 63
Query: 59 DNKGFACVTKRATKK 73
+ T + K+
Sbjct: 64 KDLSVVLATSKTKKQ 78
>gi|119467848|ref|XP_001257730.1| 60S ribosomal protein L28 [Neosartorya fischeri NRRL 181]
gi|119405882|gb|EAW15833.1| 60S ribosomal protein L28 [Neosartorya fischeri NRRL 181]
Length = 157
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKA-DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VSS L+W I ++ NA+L+K FS++P NL N SFKY+G ++K + +Q T +N
Sbjct: 8 VSSDLVWQITRSQNAFLVKRRTGGGSQFSRDPLNLQNKQSFKYAGYANTKAVGVQAT-EN 66
Query: 61 KGFACVTKR 69
G +TK+
Sbjct: 67 GGVVVITKK 75
>gi|192910792|gb|ACF06504.1| 60S ribosomal protein L28 [Elaeis guineensis]
Length = 148
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V L+W IVK NNA+L+K N FSKE NL N+ S+K+SGL + KT+ IQP
Sbjct: 4 VPGPLVWEIVKRNNAFLVKQFGNGNATVQFSKESNNLYNVNSYKHSGLANKKTVSIQPGG 63
Query: 59 DNKGFACVTKRATKK 73
+ T + K+
Sbjct: 64 KDLSVVLATTKTKKQ 78
>gi|402594165|gb|EJW88091.1| ribosomal protein L28e [Wuchereria bancrofti]
Length = 132
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S+ + W I++ +++L + I K FS+E N+ + S +++GL+H K + IQ T+D
Sbjct: 1 MASADIQWQIIRKTSSFLRRQRGIPKHFSRERFNIKGVNSIRFNGLVHKKGLDIQATSDG 60
Query: 61 KGFACVTKR 69
KG K+
Sbjct: 61 KGIIVAMKK 69
>gi|255549668|ref|XP_002515885.1| 60S ribosomal protein L28, putative [Ricinus communis]
gi|223544790|gb|EEF46305.1| 60S ribosomal protein L28, putative [Ricinus communis]
Length = 144
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW VK NN +L+K + FSKEP NL NL S+K+SGL + KT+ IQ
Sbjct: 4 VPGQLIWEAVKKNNCFLVKQFGRGSASVQFSKEPNNLYNLNSYKHSGLSNKKTVSIQAGK 63
Query: 59 DNKGFACVTK-RATKKPTA 76
D TK + +P+A
Sbjct: 64 DQSVILATTKTKKQNRPSA 82
>gi|125527427|gb|EAY75541.1| hypothetical protein OsI_03446 [Oryza sativa Indica Group]
Length = 145
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
+ L+W + K NN++L+K N K FSKEP NL N+ S+K+SGL + KT+ +QP A
Sbjct: 4 IPDSLVWELDKKNNSFLVKQFGNGNAKVQFSKEPNNLYNVHSYKHSGLANKKTVTVQP-A 62
Query: 59 DNKGFACV 66
+ K A V
Sbjct: 63 NGKETAVV 70
>gi|361128062|gb|EHL00015.1| putative 60S ribosomal protein L28e [Glarea lozoyensis 74030]
Length = 226
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Query: 1 MVSSHLIWNIVKNNNAYLMK-ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIH-IQPTA 58
VS+ LIW + +N NA+L+K A + FS++P NL N+ S K++G ++ K + I+
Sbjct: 7 QVSADLIWEVTRNQNAFLVKRAQSGGVRFSRDPFNLVNIHSRKHAGFVNEKAVGVIEEKG 66
Query: 59 DNKGFACVTK--RATKKPTADNKGFACVTKRATKKT 92
D KG +TK ++T+KP + + ++T+KT
Sbjct: 67 DKKGVTLITKKVKSTQKPGSLHHTTGLGGNKSTRKT 102
>gi|336365388|gb|EGN93739.1| hypothetical protein SERLA73DRAFT_189500 [Serpula lacrymans var.
lacrymans S7.3]
gi|336377948|gb|EGO19108.1| hypothetical protein SERLADRAFT_480340 [Serpula lacrymans var.
lacrymans S7.9]
Length = 142
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W +++N+N++++K FS EPGNL NL S+KYSGL + KTI I+ D+
Sbjct: 1 MSSDLQWLLLRNHNSFIVKRVPEGPVFSTEPGNLRNLHSYKYSGLANEKTIDIR---DSS 57
Query: 62 GFACVTKRATKKPT 75
+T R K T
Sbjct: 58 SGIQITTRKKKAST 71
>gi|168007127|ref|XP_001756260.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692770|gb|EDQ79126.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 138
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Query: 2 VSSHLIWNIVKNNNAYLMKAD---NIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
VS LIW +VKN+N +L+K + N FS EP NL NL +FKYSGL + K++ I P
Sbjct: 4 VSDDLIWLLVKNSNRFLVKRNGNNNNSVTFSSEPNNLYNLNTFKYSGLANKKSVAIAPA- 62
Query: 59 DNKGFACV-TKRATKK 73
+G + V T TKK
Sbjct: 63 --EGLSVVLTTTKTKK 76
>gi|294895488|ref|XP_002775193.1| 60S ribosomal protein L28, putative [Perkinsus marinus ATCC
50983]
gi|239881194|gb|EER07009.1| 60S ribosomal protein L28, putative [Perkinsus marinus ATCC
50983]
Length = 124
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGL--IHSKTIHIQPTA 58
+ S LIW V+NNN ++ K N F+ EPGN+ NL YSG+ + + + IQ T
Sbjct: 2 VASQQLIWQCVRNNNCFIQKRANTAA-FTTEPGNMTNLNRAGYSGIANVRAGALDIQTTG 60
Query: 59 DNKGFACVTKRATKKP 74
+ + T R T KP
Sbjct: 61 NKQTIVLTTSRKTTKP 76
>gi|443734875|gb|ELU18731.1| hypothetical protein CAPTEDRAFT_166068 [Capitella teleta]
Length = 136
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W +V+ N+ +L+ ++ FS+EP NL + SF ++GLIH +T+ ++ K
Sbjct: 1 MSADLQWMLVRKNSCFLLPGP--RRNFSREPNNLKSRHSFYHNGLIHPRTVGVEAAPGGK 58
Query: 62 GFACVTKRATKKPTADNKGFACVT-KRATKKTL 93
G VT+ A K KG + KR + TL
Sbjct: 59 GVVLVTRNARKANNRPAKGVSRTELKRGQRATL 91
>gi|168030930|ref|XP_001767975.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680817|gb|EDQ67250.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 138
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMKAD---NIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
VS LIW +VK++N +L+K + N FS EP NL NL +FKYSGL + KT+ I P
Sbjct: 4 VSDDLIWLLVKDSNRFLVKRNGNNNNSVQFSSEPNNLYNLNTFKYSGLANKKTVAIAP-- 61
Query: 59 DNKGFAC 65
N+G +
Sbjct: 62 -NEGLSV 67
>gi|443925240|gb|ELU44119.1| ribosomal l28e domain-containing protein [Rhizoctonia solani AG-1
IA]
Length = 175
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
++S+ L W +V+ N++++K FSKEPGNL N+ S KYSGLI K++HI A+
Sbjct: 27 VMSTDLQWLLVRKYNSFIVKRVPEGPIFSKEPGNLKNVHSRKYSGLISDKSLHIGHNAET 86
Query: 61 KGFACVTKRATKKPTADNKGFACVTKRA 88
+++ +KG T RA
Sbjct: 87 NAITLTSRKPKSSIHQHSKGEHKTTIRA 114
>gi|168070442|ref|XP_001786812.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162660420|gb|EDQ48374.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 117
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Query: 2 VSSHLIWNIVKNNNAYLMKAD---NIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
VS LIW +VKN+N +L+K + N FS EP NL NL +FKYSGL + K++ I P
Sbjct: 4 VSDDLIWLLVKNSNRFLVKRNGNNNNSVTFSSEPNNLYNLNTFKYSGLANKKSVAIAPA- 62
Query: 59 DNKGFACV-TKRATKK 73
+G + V T TKK
Sbjct: 63 --EGLSVVLTTTKTKK 76
>gi|409083942|gb|EKM84299.1| hypothetical protein AGABI1DRAFT_81985 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 142
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 6/68 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W +++ NN++++K I FSKEPGNL N+ SFKYSG ++KTI + +D+
Sbjct: 1 MSADLQWLLLRKNNSHIVKRGPI---FSKEPGNLRNIHSFKYSGFANAKTIDV---SDSN 54
Query: 62 GFACVTKR 69
G +T R
Sbjct: 55 GAIRITTR 62
>gi|326472491|gb|EGD96500.1| ribosomal protein L28e [Trichophyton tonsurans CBS 112818]
Length = 154
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
VS L+W I + NA+L+K A ++ FS++P NL N S KY+G ++SK I +Q A
Sbjct: 9 VSDDLVWGIARTQNAFLVKRKCAGGVQ--FSRDPLNLVNKHSRKYAGFVNSKAIGVQ-GA 65
Query: 59 DNKGFACVTKR 69
+N G A ++KR
Sbjct: 66 ENGGVAVISKR 76
>gi|326481714|gb|EGE05724.1| ribosomal protein L28e [Trichophyton equinum CBS 127.97]
Length = 158
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
VS L+W I + NA+L+K A ++ FS++P NL N S KY+G ++SK I +Q A
Sbjct: 9 VSDDLVWGIARTQNAFLVKRKCAGGVQ--FSRDPLNLVNKHSRKYAGFVNSKAIGVQ-GA 65
Query: 59 DNKGFACVTKR 69
+N G A ++KR
Sbjct: 66 ENGGVAVISKR 76
>gi|223646784|gb|ACN10150.1| 60S ribosomal protein L28 [Salmo salar]
gi|223672639|gb|ACN12501.1| 60S ribosomal protein L28 [Salmo salar]
Length = 130
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACV-TK 68
+++N +++ +K + + +S EP NL + SF+++GL+H KT+ +QP AD KG V K
Sbjct: 2 VIRNCSSFFIKRNG--QTYSTEPNNLKSKNSFRFNGLVHRKTVGVQPAADGKGVVVVLKK 59
Query: 69 RATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
RA ++ A + + K RAT +L + + R D R+
Sbjct: 60 RAGQRKPATSYEKITINKNSRATLSSLRHIIRKNNYRKDLRM 101
>gi|390604906|gb|EIN14297.1| ribosomal protein L28e [Punctularia strigosozonata HHB-11173 SS5]
Length = 144
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W +++ N++++K FSKEPGNL NL S KYSGL +SKT+H+ DN
Sbjct: 1 MSTDLEWLLLRGGNSFVVKRVPEGPIFSKEPGNLLNLHSHKYSGLANSKTLHV---FDNN 57
Query: 62 GFACVTKRATKKPTADNK---GFACVTKRA 88
+ R KK + ++ GFA T R+
Sbjct: 58 STVTIVHR--KKSASRHQVKPGFATSTIRS 85
>gi|116488134|gb|ABJ98649.1| 60S ribosomal protein L28 [Scophthalmus maximus]
Length = 106
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACV-TK 68
+++N +++L+K + + +S EP NL + SF+++GL+H KT+ +QP AD KG V K
Sbjct: 6 VIRNCSSFLIKRNG--QTYSTEPNNLKSKNSFRFNGLVHKKTVGVQPAADGKGVVVVLKK 63
Query: 69 RATKKPTADNKGFACVTK--RATKKTLSGHVDIGSARMDARL 108
RA + A + + K RAT +L + R D R+
Sbjct: 64 RAGQHKPAGSYEKITINKNSRATLNSLRHIIRKNKYRKDLRM 105
>gi|61654672|gb|AAX48862.1| L28 [Suberites domuncula]
Length = 136
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK---WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
+S+ L W ++KN++++L++ + F+ EP N+ N SFK++GL++ K + + A
Sbjct: 1 MSAELQWELIKNSSSFLLRRKGPRGSGVTFTTEPNNVMNKNSFKFNGLVNKKVVGVSSAA 60
Query: 59 DNKGFACVTKRA 70
DNKG TKR+
Sbjct: 61 DNKGVLFKTKRS 72
>gi|413946294|gb|AFW78943.1| hypothetical protein ZEAMMB73_037814 [Zea mays]
Length = 173
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 10 IVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACV 66
+V+ NN++L+K N K F+KEP NL N+ SFK+SGL + KT+ IQP A +
Sbjct: 25 VVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSAVVLS 84
Query: 67 TKRATKK 73
T + K+
Sbjct: 85 TTKTKKQ 91
>gi|413946293|gb|AFW78942.1| hypothetical protein ZEAMMB73_037814 [Zea mays]
Length = 156
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 10 IVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACV 66
+V+ NN++L+K N K F+KEP NL N+ SFK+SGL + KT+ IQP A +
Sbjct: 25 VVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNIHSFKHSGLANKKTVTIQPAAKDSAVVLS 84
Query: 67 TKRATKK 73
T + K+
Sbjct: 85 TTKTKKQ 91
>gi|157690694|tpe|CAL69074.1| TPA: putative 60S ribosomal protein L28 [Spadella cephaloptera]
Length = 132
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKAD-NIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
+S+ L W +V+N +++++K + K F+KEP NL L S K SGL +K + I P DN
Sbjct: 1 MSTDLCWMVVRNTSSFMVKGRLSRTKVFTKEPNNLTGLHSLKSSGL-GAKAVGIVPAPDN 59
Query: 61 KGFACVTKR 69
KG VTK+
Sbjct: 60 KGVVLVTKK 68
>gi|295669143|ref|XP_002795120.1| hypothetical protein PAAG_03664 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226285813|gb|EEH41379.1| hypothetical protein PAAG_03664 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 154
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
VS L+W I ++ N++L+K + FS++P NL N S KY+G ++ K I IQPT +
Sbjct: 9 VSDDLVWEITRSQNSFLVKCAGAQ--FSRDPLNLVNKHSRKYAGFVNCKAIGIQPTEE-- 64
Query: 62 GFACVTKRATKKP 74
G VT TKKP
Sbjct: 65 GTIAVT---TKKP 74
>gi|114153080|gb|ABI52706.1| 60S ribosomal protein L28 [Argas monolakensis]
Length = 142
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
MVS W +V+N +++L+K NIKKWFS +P N + + +++G I + + ++P +
Sbjct: 1 MVSRTYRWMVVRNCSSFLVKKRNIKKWFSTDPLNPKGVYANRFAGTIKKRALTVEPHSSG 60
Query: 61 KGFACV 66
KG V
Sbjct: 61 KGVTFV 66
>gi|224073524|ref|XP_002304107.1| predicted protein [Populus trichocarpa]
gi|224073532|ref|XP_002304108.1| predicted protein [Populus trichocarpa]
gi|118481531|gb|ABK92708.1| unknown [Populus trichocarpa]
gi|222841539|gb|EEE79086.1| predicted protein [Populus trichocarpa]
gi|222841540|gb|EEE79087.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN +L+K FSKE NL NL S+K+SGL + KT+ IQ A
Sbjct: 4 VPGQLIWEIVKKNNCFLVKQFGRGTASLRFSKESNNLYNLNSYKHSGLANKKTVTIQ--A 61
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTKRATKKTL 93
+K A V AT K NK A K KK
Sbjct: 62 GDKDQAVVL--ATSKTKKQNKPAALFHKSVMKKEF 94
>gi|226290826|gb|EEH46280.1| hypothetical protein PADG_08715 [Paracoccidioides brasiliensis
Pb18]
Length = 154
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
VS L+W I ++ N++L+K + FS++P NL N S KY+G ++ K I IQPT +
Sbjct: 9 VSDDLVWEITRSQNSFLVKCAGAQ--FSRDPLNLVNKHSRKYAGFVNCKAIGIQPTEE-- 64
Query: 62 GFACVTKRATKKP 74
G VT TKKP
Sbjct: 65 GTIAVT---TKKP 74
>gi|302755534|ref|XP_002961191.1| hypothetical protein SELMODRAFT_164298 [Selaginella
moellendorffii]
gi|302766786|ref|XP_002966813.1| hypothetical protein SELMODRAFT_270600 [Selaginella
moellendorffii]
gi|300164804|gb|EFJ31412.1| hypothetical protein SELMODRAFT_270600 [Selaginella
moellendorffii]
gi|300172130|gb|EFJ38730.1| hypothetical protein SELMODRAFT_164298 [Selaginella
moellendorffii]
Length = 138
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 MVSSHLIWNIVKNNNAYLMKAD---NIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPT 57
M S LIW +VKN+N +L+K + + FS EP NL NL ++KYSGL + KT+ + P
Sbjct: 1 MASPDLIWLLVKNSNKFLVKRNGNSSASVQFSSEPNNLYNLNTYKYSGLANKKTVAVAPA 60
Query: 58 AD 59
+
Sbjct: 61 GE 62
>gi|431918074|gb|ELK17302.1| 60S ribosomal protein L28 [Pteropus alecto]
Length = 97
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 4/70 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSK--TIHIQPTAD 59
+S+HL W +V + +++L+K + K+ +S EP NL SF+Y+G+IH + + ++P AD
Sbjct: 1 MSAHLQWMVVWHCSSFLIKRN--KQTYSTEPNNLKACNSFRYNGMIHRRRWAVGVEPAAD 58
Query: 60 NKGFACVTKR 69
KG V KR
Sbjct: 59 GKGVVVVMKR 68
>gi|320162904|gb|EFW39803.1| ribosomal protein L28 [Capsaspora owczarzaki ATCC 30864]
Length = 140
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS + W +++NN+++L+K + FS E GNL SFK +GL++ +++ ++ AD K
Sbjct: 1 MSSDVQWMVIRNNSSFLLKKAGV--TFSTEAGNLTGKNSFKANGLVNKRSVGVKAAADGK 58
Query: 62 GFACVTKRATKKPTADNKGFACVT 85
G VT R KK K VT
Sbjct: 59 GV-VVTLRNDKKSFKPTKATRSVT 81
>gi|154300847|ref|XP_001550838.1| 60S ribosomal protein L28 [Botryotinia fuckeliana B05.10]
gi|347841474|emb|CCD56046.1| similar to 60S ribosomal protein L28 [Botryotinia fuckeliana]
Length = 150
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMK-ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS+ LIW + ++ NA+L+K FS++P NL N S KY+G ++ K + + P+
Sbjct: 5 VSADLIWEVTRSQNAFLVKRTTGGGSTFSRDPLNLTNKHSRKYAGFVNDKAVGVVPS--E 62
Query: 61 KGFACVTKR--ATKKPTAD-NKGFACVTKRATKKTLSGHVDIGSARMDAR 107
KG +TK+ A++KP + NK + R T ++ V G R D R
Sbjct: 63 KGVTLITKKTSASQKPASSLNKTTYSKSGRKTFAGVAKTVAQGGYRSDLR 112
>gi|168067582|ref|XP_001785691.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662661|gb|EDQ49486.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 148
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK---WFSKEPGNLPNLASFKYSGLIHSKTIHIQPT 57
VS L W +VKNNN +L+K + FS EP NL NL +FK+SGL + KT+ I P+
Sbjct: 4 VSDDLTWLLVKNNNRFLVKMNGNNSNSVQFSSEPNNLYNLNTFKHSGLANKKTVAIAPS 62
>gi|150982168|gb|ABR87286.1| large subunit ribosomal protein 28 [Pristionchus sp. 6 RS5101]
Length = 126
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
+++NN+A++ + I+K FS+EP NL + S Y+GL++ K + + DNK K+
Sbjct: 2 VIRNNSAFIRRQRGIQKHFSREPNNLKAINSQNYNGLVNDKAVGVTLAEDNKSVVVTVKK 61
Query: 70 ATKK 73
A K+
Sbjct: 62 AGKR 65
>gi|294899084|ref|XP_002776486.1| 60S ribosomal protein L28, putative [Perkinsus marinus ATCC
50983]
gi|239883498|gb|EER08302.1| 60S ribosomal protein L28, putative [Perkinsus marinus ATCC
50983]
Length = 124
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKT--IHIQPTA 58
+ S L+W V+NNN ++ K N F+ EPGN+ NL YSG+ + + + IQ T
Sbjct: 2 VASQQLLWQCVRNNNCFIQKRANTAA-FTTEPGNMTNLNRAGYSGIANVRVGGLDIQTTG 60
Query: 59 DNKGFACVTKRATKKP 74
+ + T + TKKP
Sbjct: 61 NKQTIVLTTSKKTKKP 76
>gi|294876162|ref|XP_002767582.1| 60S ribosomal protein L28, putative [Perkinsus marinus ATCC
50983]
gi|239869242|gb|EER00300.1| 60S ribosomal protein L28, putative [Perkinsus marinus ATCC
50983]
Length = 124
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKT--IHIQPTA 58
+ S L+W V+NNN ++ K N F+ EPGN+ NL YSG+ + + + IQ T
Sbjct: 2 VASQQLLWQCVRNNNCFIQKRANTAA-FTTEPGNMTNLNRAGYSGIANVRVGGLDIQTTG 60
Query: 59 DNKGFACVTKRATKKP 74
+ + T + TKKP
Sbjct: 61 NKQTIVLTTSKKTKKP 76
>gi|452841110|gb|EME43047.1| hypothetical protein DOTSEDRAFT_35388 [Dothistroma septosporum
NZE10]
Length = 153
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
+S+ LIW I + NNA+L+K A ++ FS++P NL N S KY G ++++ I IQP +
Sbjct: 8 ISNDLIWEITRGNNAFLVKRKQAGGVQ--FSRDPLNLVNKHSRKYEGYVNAQAIGIQPDS 65
Query: 59 DNKGFACVTKRATK 72
+ TK A K
Sbjct: 66 NTIALTTKTKSANK 79
>gi|302892811|ref|XP_003045287.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256726212|gb|EEU39574.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 158
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKAD-NIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
+SS L+W IV+NNN++ K+ N FS++P NL N++S K++G ++ K + I +
Sbjct: 9 ISSDLVWEIVRNNNSFSAKSKKNGGVQFSRDPLNLTNISSRKHAGFVNDKAVGI--SVGE 66
Query: 61 KGFACV-TKRATKKPTADN---KGFACV-TKRATKKTLSGHVDIGSARMDARLYIFE 112
KG V TK+A A N ++ V + R T + ++ V S R D R E
Sbjct: 67 KGEVVVTTKKAQPNKPAQNTTQTSYSAVKSNRKTYQAVANQVAKNSYRPDLRAAAVE 123
>gi|225442353|ref|XP_002281233.1| PREDICTED: 60S ribosomal protein L28-2 [Vitis vinifera]
gi|147863559|emb|CAN84039.1| hypothetical protein VITISV_024169 [Vitis vinifera]
gi|297743118|emb|CBI35985.3| unnamed protein product [Vitis vinifera]
Length = 149
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK N+++L+K FSKE NL N+ S+K+SGL + KT+ IQ
Sbjct: 4 VPGQLIWEIVKKNSSFLVKEFGNGTASVQFSKESNNLYNVNSYKHSGLANHKTVTIQGGK 63
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTKRATKKTL 93
DN A V AT K NK + + K A KK
Sbjct: 64 DN---AVVL--ATTKTKKQNKPGSLLHKSAMKKEF 93
>gi|258569675|ref|XP_002543641.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903911|gb|EEP78312.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 157
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 2 VSSHLIWNIVKNNNAYLM-KADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS L+W IV++ NAYL+ + FS++P NL N+ S KYSG ++K + IQ A+N
Sbjct: 9 VSEDLVWEIVRSQNAYLVNRKSGGGVRFSRDPLNLTNIHSRKYSGFSNNKALGIQ-AAEN 67
Query: 61 KGFACVTKRATKKPTADNK 79
G ++KKP + N+
Sbjct: 68 NGLTV----SSKKPGSSNQ 82
>gi|449541603|gb|EMD32586.1| hypothetical protein CERSUDRAFT_143604 [Ceriporiopsis
subvermispora B]
Length = 145
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQ 55
+S L W +++ NA+++K FS+EPGNL NL SFKYSGL + K I ++
Sbjct: 1 MSGDLQWLLLRKQNAFIVKRVPEGPVFSREPGNLTNLHSFKYSGLANPKAIDVR 54
>gi|158187788|gb|ABW23183.1| ribosomal protein rpl28 [Arenicola marina]
Length = 137
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+++ + W I++ N+ +L K S EP NL N SF+Y+GLIH +T+ ++ D K
Sbjct: 1 MTADVQWMIIRKNSCFLKKGKGAP-TMSLEPNNLKNKNSFRYNGLIHKQTVGVEAAEDGK 59
Query: 62 GFACVTKR 69
G VT++
Sbjct: 60 GVVLVTRK 67
>gi|340384458|ref|XP_003390729.1| PREDICTED: 60S ribosomal protein L28-like [Amphimedon
queenslandica]
Length = 141
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 43/68 (63%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W ++K ++++++K K FS+EP NL + +KY+GL++++ + + P NK
Sbjct: 1 MSSQLQWELIKKSSSFIVKDKKNKAAFSREPNNLRHWHCYKYNGLVNNQAVGVYPGQGNK 60
Query: 62 GFACVTKR 69
G V K+
Sbjct: 61 GVVLVYKK 68
>gi|392570666|gb|EIW63838.1| ribosomal protein L28e [Trametes versicolor FP-101664 SS1]
Length = 142
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W +++ N++ +K FSKEPGNL N+ S+KYSGL + KTI ++ T
Sbjct: 1 MSSDLQWLLLRKYNSFTVKRVEEGPIFSKEPGNLTNIHSWKYSGLANEKTITVKET--ET 58
Query: 62 GFACVTKRATKKPTADNKGFACVTKR 87
G ++ + P A + + ++ R
Sbjct: 59 GVQLAYRKKSASPLAVHPAVSTISIR 84
>gi|321248348|ref|XP_003191100.1| 60s ribosomal protein [Cryptococcus gattii WM276]
gi|317457567|gb|ADV19313.1| 60s ribosomal protein, putative [Cryptococcus gattii WM276]
Length = 155
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W +V+N N++ +K + FSKE GNL N ++ KYSGL +SK + I P+AD
Sbjct: 1 MSSDLTWLLVRNWNSFQVKGGH-GPVFSKEKGNLLNKSAHKYSGLANSKVVSIHPSAD-- 57
Query: 62 GFACVTK-RATKKP 74
G +TK +A KP
Sbjct: 58 GGITITKIKADAKP 71
>gi|389742367|gb|EIM83554.1| hypothetical protein STEHIDRAFT_34397, partial [Stereum hirsutum
FP-91666 SS1]
Length = 141
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W +++ N++L+K FSKEPGNL +L S KYSG+ +SK + ++ +
Sbjct: 1 MSNDLEWLLIRKQNSFLVKRLPEGPIFSKEPGNLLSLHSHKYSGVANSKAVLVRESPS-- 58
Query: 62 GFACVTKRATKKPTADNKGFACVT 85
G +TK+ P A A T
Sbjct: 59 GIQIITKKKDASPNAVRGALATTT 82
>gi|302668182|ref|XP_003025666.1| hypothetical protein TRV_00154 [Trichophyton verrucosum HKI 0517]
gi|291189787|gb|EFE45055.1| hypothetical protein TRV_00154 [Trichophyton verrucosum HKI 0517]
Length = 158
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
VS L+W I + N+YL+K ++ FS++P NL N S KY+G ++SK I +Q A
Sbjct: 9 VSDDLVWAIARTQNSYLVKRKCGGGVQ--FSRDPLNLVNKHSRKYAGFVNSKAIGVQ-GA 65
Query: 59 DNKGFACVTKR 69
+N G A +KR
Sbjct: 66 ENGGVAVTSKR 76
>gi|442751701|gb|JAA68010.1| Putative ribosomal protein l28 [Ixodes ricinus]
Length = 141
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W +VK+ + +L+K IK WFS +P N + +YSG + +K + ++P + K
Sbjct: 1 MSSDLQWMVVKDRSCFLVKKRMIKTWFSTDPLNPKGTHAKRYSGTVLNKALTVEPHSTGK 60
Query: 62 GFACVTKRATKK 73
G V K+ +++
Sbjct: 61 GVNLVYKKQSRR 72
>gi|150982170|gb|ABR87287.1| large subunit ribosomal protein 28 [Pristionchus marianneae]
Length = 126
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 9 NIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTK 68
+++NN+A++ + I+K FS EP NL + S Y+GLI+ K + + DNK K
Sbjct: 1 QVIRNNSAFIRRQRGIQKAFSTEPLNLKAINSPSYNGLINKKAVGVTLAEDNKSVVVTVK 60
Query: 69 RATKK 73
+A KK
Sbjct: 61 KAGKK 65
>gi|156048490|ref|XP_001590212.1| hypothetical protein SS1G_08976 [Sclerotinia sclerotiorum 1980]
gi|154693373|gb|EDN93111.1| hypothetical protein SS1G_08976 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 150
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMK-ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS+ LIW + ++ NA+L+K FS++P NL N S KY+G ++ K + + P
Sbjct: 5 VSADLIWEVTRSQNAFLVKRTTGGGSTFSRDPLNLTNKHSRKYAGFVNDKAVGVVPA--E 62
Query: 61 KGFACVTKR--ATKKP 74
KG +TK+ A++KP
Sbjct: 63 KGVTLITKKTSASQKP 78
>gi|428179118|gb|EKX47990.1| large subunit ribosomal protein L28e, cytoplasmic [Guillardia
theta CCMP2712]
Length = 140
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
S+ L+W + ++N+++L+K ++ + SK+P NL N SFKYSGL + K+ I+ +NK
Sbjct: 5 TSADLLWMLTRSNSSFLVKRESGRIQLSKDPFNLMNKNSFKYSGLANGKSADIRQY-ENK 63
Query: 62 GFACVTK--RATKKPTADNKGFAC 83
G TK +A P + C
Sbjct: 64 GIVLTTKLTKAATSPAKSVRKVVC 87
>gi|219113605|ref|XP_002186386.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583236|gb|ACI65856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 152
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKAD-NIKKW----FSKEPGNLPNLASFKYSGLIHSKTIHIQP 56
V L+W ++K + +L K + N K+ FS E GNL +L KY+GL +SKTI +
Sbjct: 4 VPDQLVWELIKKQSCFLKKKNGNTKRSGSISFSVEKGNLKSLNLLKYNGLANSKTIDVVC 63
Query: 57 TADNKGFACVTKRATKKPTADNKGFA 82
T++N+ VTK A+K + +K FA
Sbjct: 64 TSENRA-QLVTKSASKADNSPSKTFA 88
>gi|393238310|gb|EJD45847.1| 60S ribosomal protein L28 [Auricularia delicata TFB-10046 SS5]
Length = 142
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W +V+ +N++++K SKEPGNL N+ S K+SGL+++KTI I +A
Sbjct: 1 MSSDLQWLLVRKHNSFVVKKLPEGPVLSKEPGNLLNVHSQKFSGLVNAKTIDI--SAAPA 58
Query: 62 GFACVTKR 69
G A T++
Sbjct: 59 GVAVTTRK 66
>gi|150982184|gb|ABR87294.1| large subunit ribosomal protein 28 [Pristionchus sp. 14 RS5230]
Length = 126
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 9 NIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTK 68
+++NN+A+L + I K FS+EP NL ++ S Y+GL++ K + + DNK K
Sbjct: 1 QVIRNNSAFLRRQRGIPKAFSREPLNLKSINSPSYNGLVNXKAVGVTLAEDNKSVVVTVK 60
Query: 69 RATKK 73
+ KK
Sbjct: 61 KTGKK 65
>gi|315044765|ref|XP_003171758.1| ribosomal protein L28e [Arthroderma gypseum CBS 118893]
gi|311344101|gb|EFR03304.1| ribosomal protein L28e [Arthroderma gypseum CBS 118893]
Length = 158
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
VS L+W I + NA+L+K A ++ FS++P NL N S KY+G ++SK + IQ
Sbjct: 9 VSDDLVWGIARTQNAFLVKRKCAGGVQ--FSRDPLNLVNKHSRKYAGFVNSKAVGIQ-AG 65
Query: 59 DNKGFACVTKRATKKPTADNK 79
+N G +KR P NK
Sbjct: 66 ENGGVTVTSKR----PETSNK 82
>gi|150982152|gb|ABR87278.1| large subunit ribosomal protein 28 [Pristionchus pacificus]
Length = 127
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
+++NN+A++ + I+K FS+EP NL + S Y+GL ++K I + DNK K+
Sbjct: 2 VIRNNSAFIRRQRGIQKAFSREPLNLKGINSPNYNGLTNAKAIGVTLAEDNKSVVVTVKK 61
Query: 70 ATKK 73
+ KK
Sbjct: 62 SGKK 65
>gi|407922779|gb|EKG15871.1| Ribosomal protein L28e [Macrophomina phaseolina MS6]
Length = 153
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 8/80 (10%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
VS+ LIW + +N +A+L+K A ++ FS++P NL N + KY G ++ K IQP+
Sbjct: 5 VSADLIWEVTRNTSAFLLKRRQAGGVQ--FSRDPLNLTNKHARKYEGFVNDKAFGIQPS- 61
Query: 59 DNKGFACVTKRATK--KPTA 76
+N G + K++ K KP A
Sbjct: 62 ENGGVQLLLKKSNKSNKPAA 81
>gi|307104734|gb|EFN52986.1| hypothetical protein CHLNCDRAFT_54075 [Chlorella variabilis]
Length = 130
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIK-KWFSKEPGNLPNLASFKYSGLIHSKT---IHIQPT 57
+SS L+W +VK N+A+L K + FS EPGNL N S+KYSGL + + + + P+
Sbjct: 1 MSSQLVWELVKKNHAFLRKNAAVNGALFSGEPGNLANKHSYKYSGLANRASTVDVALAPS 60
Query: 58 AD 59
D
Sbjct: 61 GD 62
>gi|354492313|ref|XP_003508293.1| PREDICTED: 60S ribosomal protein L28-like [Cricetulus griseus]
Length = 127
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 30 KEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKRAT--KKP 74
+EP NL SF+Y+GLIH KT+ ++P AD KG V KR + +KP
Sbjct: 17 EEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVMKRRSGQRKP 63
>gi|378730837|gb|EHY57296.1| ribosomal protein L28e [Exophiala dermatitidis NIH/UT8656]
Length = 152
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK-WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
+S LIW +V+NNN++L+K + FS++P NL N S K+ G ++ K + +Q A+
Sbjct: 7 ISGDLIWEVVRNNNSFLVKRSSAGGVQFSRDPFNLVNKHSRKHEGFVNDKAVSVQ--ANE 64
Query: 61 KGFACVTKRATKKPTADNKGFACVTKRATKKTLS 94
KG + TKKP NK + A KT+S
Sbjct: 65 KGGVTLK---TKKPGKANKPASQHNVHAYGKTVS 95
>gi|307006545|gb|ADN23557.1| putative ribosomal protein L28 [Hyalomma marginatum rufipes]
Length = 137
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 6 LIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFAC 65
L W IVK+ +++L+K IK WFS +P N + +YSG + K + I+P + KG
Sbjct: 1 LQWMIVKDRSSFLVKKRMIKTWFSIDPLNPKGTHAKRYSGTVRDKALTIEPHSSGKGVTL 60
Query: 66 VTKRAT--KKP 74
V K+ KKP
Sbjct: 61 VYKKQAYRKKP 71
>gi|367050976|ref|XP_003655867.1| hypothetical protein THITE_2120064 [Thielavia terrestris NRRL 8126]
gi|347003131|gb|AEO69531.1| hypothetical protein THITE_2120064 [Thielavia terrestris NRRL 8126]
Length = 152
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 2 VSSHLIWNIVKNNNAYLMKADN-IKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS+ LIW I + +NA+L+K + FS++P NL N+ S KY+G ++ K + I P +
Sbjct: 4 VSADLIWEISRTSNAFLVKRKSGAAPQFSRDPLNLTNVHSRKYAGFVNDKALGIVP--NE 61
Query: 61 KGFACVTKRATKKPTADNKGFACV---------TKRATKKTLSGHVDIGSARMDAR 107
KG V +KKP + NK + + T R T K ++ V R D R
Sbjct: 62 KGGVRVI---SKKPASVNKPASSLYTVTYGANKTARKTYKAVANQVAKNGYRPDLR 114
>gi|150982182|gb|ABR87293.1| large subunit ribosomal protein 28 [Pristionchus sp. 13 RS5231]
Length = 126
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
I++NN+++L + I+K FS+EP NL ++ S Y+GLI++K + + DNK K+
Sbjct: 2 IIRNNSSFLRRQRGIQKAFSREPLNLKSINSPSYNGLINNKAVGVTLAEDNKSVVVAVKK 61
Query: 70 ATKK 73
K+
Sbjct: 62 NGKR 65
>gi|367026814|ref|XP_003662691.1| hypothetical protein MYCTH_2315051 [Myceliophthora thermophila
ATCC 42464]
gi|347009960|gb|AEO57446.1| hypothetical protein MYCTH_2315051 [Myceliophthora thermophila
ATCC 42464]
Length = 149
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
VS+ LIW + + N+YL+K + FS++P NL NL S KY+G + K I I P + K
Sbjct: 4 VSADLIWEVSRLQNSYLVKTKTGQ--FSRDPLNLTNLHSRKYAGFANDKAIGISP--NEK 59
Query: 62 GFACVTKRATKKPTADNK 79
G V +KKP A NK
Sbjct: 60 GGVKVI---SKKPAATNK 74
>gi|241152242|ref|XP_002406865.1| ribosomal protein L28, putative [Ixodes scapularis]
gi|215493961|gb|EEC03602.1| ribosomal protein L28, putative [Ixodes scapularis]
Length = 141
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W +VK+ + +L+K IK WFS +P N + +YSG + +K + ++P + K
Sbjct: 1 MSSDLQWMVVKDRSCFLVKKRMIKTWFSTDPLNPKGTHAKRYSGTVLNKALTVEPHSTGK 60
Query: 62 GFACVTKRATKK 73
G V K+ ++
Sbjct: 61 GVNLVYKKQNRR 72
>gi|406860409|gb|EKD13467.1| malate dehydrogenase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 618
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 3 SSHLIWNIVKNNNAYLMK-ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
S+ LIW IV NA+L+K A + FS++P NL NL S K++G ++ K + + P A K
Sbjct: 9 SADLIWEIVGAQNAFLVKRAQSGGVRFSRDPLNLVNLHSRKHAGFVNDKAVGVVPAAGEK 68
Query: 62 -GFACVTKRA--TKKPTADNKGFACVTKRATKKTLSGHVD 98
G +TK+ +KP + T+KT G V+
Sbjct: 69 GGVTLITKKVNHAQKPGPGAIKTTFGGNKTTRKTYKGIVN 108
>gi|390135443|gb|AFL56702.1| large subunit ribosomal protein 28, partial [Pristionchus
exspectatus]
Length = 127
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
+++NN+A++ + I+K FS+EP NL + S Y+GL ++K + + DNK K+
Sbjct: 2 VIRNNSAFIRRQRGIQKAFSREPLNLKGINSPNYNGLTNAKAVGVTLAEDNKSVVVTVKK 61
Query: 70 ATKK 73
+ KK
Sbjct: 62 SGKK 65
>gi|302673271|ref|XP_003026322.1| hypothetical protein SCHCODRAFT_79801 [Schizophyllum commune
H4-8]
gi|300100004|gb|EFI91419.1| hypothetical protein SCHCODRAFT_79801 [Schizophyllum commune
H4-8]
Length = 145
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W +++ N++++K FSKEPGNL N+ S+KYSGL +SK I + + +
Sbjct: 1 MSNDLEWLLIRKYNSFIVKKVPEGPVFSKEPGNLTNVHSYKYSGLANSKAIDVSDSPN-- 58
Query: 62 GFACVTKRATKKPT 75
G T++ P+
Sbjct: 59 GIKITTRKVKAAPS 72
>gi|150982180|gb|ABR87292.1| large subunit ribosomal protein 28 [Pristionchus americanus]
Length = 126
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 9 NIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTK 68
+++NN+A++ + I+K FS EP NL + S Y+GLI+ K + + DNK +
Sbjct: 1 QVIRNNSAFIRRQRGIQKAFSTEPLNLKAINSPSYNGLINKKAVGVTLAEDNKSVVVTVR 60
Query: 69 RATKK 73
+A KK
Sbjct: 61 KAGKK 65
>gi|67083849|gb|AAY66859.1| ribosomal protein L28 [Ixodes scapularis]
Length = 141
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W +VK+ + +L+K IK WFS +P N + +YSG + +K + ++P + K
Sbjct: 1 MSSDLKWMVVKDRSCFLVKKRMIKTWFSTDPLNPKGTHAKRYSGTVLNKALTVEPHSTGK 60
Query: 62 GFACVTKRATKK 73
G V K+ ++
Sbjct: 61 GVNLVYKKQNRR 72
>gi|344251398|gb|EGW07502.1| 60S ribosomal protein L28 [Cricetulus griseus]
Length = 114
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 31 EPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKRAT--KKP 74
EP NL SF+Y+GLIH KT+ ++P AD KG V KR + +KP
Sbjct: 5 EPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVMKRRSGQRKP 50
>gi|296415135|ref|XP_002837247.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633108|emb|CAZ81438.1| unnamed protein product [Tuber melanosporum]
Length = 125
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKW--FSKEPGNLPNLASFKYSGLIHSKTIHIQPTAD 59
VSS LIW I +NN++Y++K +K F++EP +L N + K+SGL++ K + +Q +
Sbjct: 5 VSSDLIWAITRNNSSYIVKRGPVKDQIIFTREPLSLTNQHTRKHSGLVNEKAVGVQ-AGE 63
Query: 60 NKGFACVTKRATKK 73
N +TK+ +K
Sbjct: 64 NGNVVLITKKNAEK 77
>gi|327297506|ref|XP_003233447.1| ribosomal protein L28e [Trichophyton rubrum CBS 118892]
gi|326464753|gb|EGD90206.1| ribosomal protein L28e [Trichophyton rubrum CBS 118892]
Length = 158
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
VS L+W I + NA+L+K A ++ FS++P NL N S K++G ++SK I +Q A
Sbjct: 9 VSDDLVWAIARTQNAFLVKRKCAGGVQ--FSRDPLNLVNKHSRKFAGFVNSKAIGVQ-GA 65
Query: 59 DNKGFACVTKR 69
+N G ++KR
Sbjct: 66 ENGGVTVISKR 76
>gi|150982156|gb|ABR87280.1| large subunit ribosomal protein 28 [Pristionchus lheritieri]
Length = 126
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
+++NN+++L + I+K FS+EP NL ++ S Y+GLI++K + + DNK K+
Sbjct: 2 VIRNNSSFLRRQRGIQKAFSREPLNLKSINSPSYNGLINNKAVGVTLAEDNKSVVVAVKK 61
Query: 70 ATKK 73
K+
Sbjct: 62 NGKR 65
>gi|150982166|gb|ABR87285.1| large subunit ribosomal protein 28 [Pristionchus aerivorus]
Length = 126
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 9 NIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTK 68
+++NN+A+L + I+K FS EP NL + S Y+GLI+ K + + D K K
Sbjct: 1 QVIRNNSAFLRRQRGIQKAFSAEPLNLKAINSPSYNGLINKKAVGVTLAEDGKSVVVTVK 60
Query: 69 RATKK 73
+A KK
Sbjct: 61 KAGKK 65
>gi|425773757|gb|EKV12091.1| 60S ribosomal protein L28 [Penicillium digitatum PHI26]
gi|425782319|gb|EKV20238.1| 60S ribosomal protein L28 [Penicillium digitatum Pd1]
Length = 151
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKW-FSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
+S+ L+W I +N N++L+ ++ + FS++P NL N S+KY+G ++K + +Q T +
Sbjct: 5 ISNDLVWQITRNQNSFLVNRNSGGGFQFSRDPLNLLNKHSYKYAGYANNKAVGVQATEN- 63
Query: 61 KGFACVTKRATKKPTADNKGFACVT---KRATKKTLSGHVD 98
G A +TK+ + P + VT +T+K G D
Sbjct: 64 -GVAVITKKPS-NPQQPAQNLVTVTYGPSTSTRKIYKGVAD 102
>gi|358059013|dbj|GAA95194.1| hypothetical protein E5Q_01849 [Mixia osmundae IAM 14324]
Length = 175
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 5 HLIWNIVKNNNAYLMKA-DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGF 63
L W +V+ NAY K+ K SKEPGNL N+ +FK SGL+ KTI I + KG
Sbjct: 27 ELQWLLVRKWNAYGHKSVSQGIKVLSKEPGNLRNVHTFKQSGLVQPKTIGIAAGPNGKGL 86
Query: 64 ACVTKR 69
T++
Sbjct: 87 TITTRK 92
>gi|150982178|gb|ABR87291.1| large subunit ribosomal protein 28 [Pristionchus sp. 11 RS5228]
Length = 127
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
+++NN+A+L + I+K FS+EP NL + S Y+GL ++K + + DNK K+
Sbjct: 2 VIRNNSAFLRRQRGIQKAFSREPLNLKGINSPNYNGLTNNKAVGVTLAEDNKSVVVSVKK 61
Query: 70 ATKK 73
KK
Sbjct: 62 TGKK 65
>gi|150982174|gb|ABR87289.1| large subunit ribosomal protein 28 [Pristionchus pseudaerivorus]
Length = 126
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 9 NIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTK 68
+++NN+A+L + I+K FS EP NL + S Y+GLI+ K + + D K K
Sbjct: 1 QVIRNNSAFLRRQRGIQKAFSTEPLNLKAINSPSYNGLINKKAVGVTLAEDGKSVVVTVK 60
Query: 69 RATKK 73
+A KK
Sbjct: 61 KAGKK 65
>gi|403265950|ref|XP_003925171.1| PREDICTED: uncharacterized protein LOC101037027 [Saimiri
boliviensis boliviensis]
Length = 299
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 5 HLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFA 64
HL+W + N +++L+K + K+ +S EP NL SF Y+GLI KT+ ++ AD K
Sbjct: 165 HLLWMVTWNCSSFLIKRN--KQIYSNEPSNLKARDSFHYNGLIRRKTVVVELAADGKDVL 222
Query: 65 CVTK 68
VTK
Sbjct: 223 VVTK 226
>gi|302510903|ref|XP_003017403.1| hypothetical protein ARB_04283 [Arthroderma benhamiae CBS 112371]
gi|291180974|gb|EFE36758.1| hypothetical protein ARB_04283 [Arthroderma benhamiae CBS 112371]
Length = 158
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
VS L+W I + N++L+K ++ FS++P NL N S KY+G +SK I +Q A
Sbjct: 9 VSDDLVWAIARTQNSFLVKRKCGGGVQ--FSRDPLNLVNKHSRKYAGFANSKAIGVQ-AA 65
Query: 59 DNKGFACVTKR 69
+N G A ++KR
Sbjct: 66 ENGGVAVISKR 76
>gi|154276890|ref|XP_001539290.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414363|gb|EDN09728.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 154
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
VS L+W IV+ N++L+K + FS++P NL N S KY+G +SK I I T +
Sbjct: 9 VSDDLVWEIVRAQNSFLVKRPGCQ--FSRDPLNLANKHSRKYAGFANSKAIGIHLTEN-- 64
Query: 62 GFACVTKRATKKPTADNK 79
G VT TKKP NK
Sbjct: 65 GNVAVT---TKKPGMSNK 79
>gi|341878310|gb|EGT34245.1| hypothetical protein CAEBREN_06248 [Caenorhabditis brenneri]
gi|341887848|gb|EGT43783.1| hypothetical protein CAEBREN_05470 [Caenorhabditis brenneri]
Length = 126
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S L+W +++NNNA+L I K FS E NL + S KYSGL + I + A K
Sbjct: 1 MSDALVWQVIRNNNAFLRTQRGIGKRFSTEKFNLKKVNSPKYSGLANKHAIDVSAAA--K 58
Query: 62 GFACVTKRATKKP 74
G TK +P
Sbjct: 59 GVVVSTKNEKGRP 71
>gi|150982154|gb|ABR87279.1| large subunit ribosomal protein 28 [Pristionchus maupasi]
Length = 126
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
+++NN+A+L + I+K FS EP NL ++ S Y+GLI+ K + + D K K+
Sbjct: 2 VIRNNSAFLRRQRGIQKAFSTEPLNLKSINSPSYNGLINKKAVGVTLAEDGKSVVVTVKK 61
Query: 70 ATK 72
A K
Sbjct: 62 AGK 64
>gi|150982164|gb|ABR87284.1| large subunit ribosomal protein 28 [Pristionchus sp. 4 RS5050]
Length = 126
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
+++NN+++L + I+K FS+EP NL + S Y+GLI++K I + DNK K+
Sbjct: 2 VIRNNSSFLRRQRGIQKAFSREPLNLKAINSPSYNGLINNKAIGVTLAEDNKSVVVAMKK 61
Query: 70 ATKK 73
K+
Sbjct: 62 NGKR 65
>gi|336469452|gb|EGO57614.1| hypothetical protein NEUTE1DRAFT_116884 [Neurospora tetrasperma
FGSC 2508]
gi|350290903|gb|EGZ72117.1| ribosomal protein L28e [Neurospora tetrasperma FGSC 2509]
Length = 150
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK-WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
+S+ LIW I +++N+YL+K + FS++P NL N S KY+G ++ K + + P +
Sbjct: 6 ISADLIWEITRSHNSYLVKRKSGGGVQFSRDPLNLTNKHSRKYAGFVNDKAVGVVP-GEK 64
Query: 61 KGFACVTKRA--TKKPTA 76
G +TK+A KP A
Sbjct: 65 GGVVVITKKAGSINKPAA 82
>gi|167538485|ref|XP_001750906.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770590|gb|EDQ84276.1| predicted protein [Monosiga brevicollis MX1]
Length = 763
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 2 VSSHLIWNIVKNNNAYLMK-ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
+S L W IVK NN Y+ + +++FS E N+ L SF+ SGL +SK ++P A
Sbjct: 36 MSDALTWQIVKKNNRYINRNGTGDRRYFSTEETNITKLHSFRASGLANSKAFGVRPIAGA 95
Query: 61 KGFACVTK 68
KG V K
Sbjct: 96 KGVEIVAK 103
>gi|150982158|gb|ABR87281.1| large subunit ribosomal protein 28 [Pristionchus entomophagus]
gi|150982160|gb|ABR87282.1| large subunit ribosomal protein 28 [Pristionchus uniformis]
Length = 126
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
I++NN+++L + I+K FS EP NL ++ S Y+GLI++K + + DNK K+
Sbjct: 2 IIRNNSSFLRRQRGIQKAFSTEPLNLKSINSPSYNGLINNKAVGVTLAEDNKSVVVAVKK 61
Query: 70 ATKK 73
K+
Sbjct: 62 NGKR 65
>gi|119196413|ref|XP_001248810.1| hypothetical protein CIMG_02581 [Coccidioides immitis RS]
gi|303322392|ref|XP_003071189.1| 60S ribosomal protein L28, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240110888|gb|EER29044.1| 60S ribosomal protein L28, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040612|gb|EFW22545.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392861974|gb|EAS37423.2| hypothetical protein CIMG_02581 [Coccidioides immitis RS]
Length = 157
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 2 VSSHLIWNIVKNNNAYLM-KADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS L+W IV++ N++L+ + F+++P NL N+ + KYSG +K + IQ A+N
Sbjct: 9 VSEDLVWEIVRSQNSFLVNRKSGGGARFTRDPLNLTNVHTRKYSGFSSNKAVGIQ-AAEN 67
Query: 61 KGFACVTKR 69
G TKR
Sbjct: 68 NGLTVSTKR 76
>gi|255931577|ref|XP_002557345.1| Pc12g04760 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581964|emb|CAP80103.1| Pc12g04760 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 151
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKW-FSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
+S+ L+W I +N NA+L+ ++ + FS++P NL N S+KY+G ++K + +Q T +
Sbjct: 5 ISNDLVWQITRNQNAFLVNRNSGGGFQFSRDPLNLLNKHSYKYAGYANNKAVGVQATEN- 63
Query: 61 KGFACVTKRATKKPTADNKGFACVT 85
G A TK+ + P + VT
Sbjct: 64 -GVAVTTKKPS-NPQQPAQNLVTVT 86
>gi|66811998|ref|XP_640178.1| hypothetical protein DDB_G0282379 [Dictyostelium discoideum AX4]
gi|24418651|sp|Q9GS21.1|RL28_DICDI RecName: Full=60S ribosomal protein L28
gi|11245768|gb|AAG32533.1| ribosomal protein L28 [Dictyostelium discoideum]
gi|60468039|gb|EAL66049.1| hypothetical protein DDB_G0282379 [Dictyostelium discoideum AX4]
Length = 132
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S L+W+I+K NNA+L + + S EPGNL N S KYSGL TI + A
Sbjct: 1 MSQDLVWSIIKKNNAFLKSSHGLT--LSAEPGNLRNKNSLKYSGLARRTTIDV---AAVN 55
Query: 62 GFACVTKRATKK---PTADNK--GFACVTKRATKK 91
G V+ + KK P K F+ V R T +
Sbjct: 56 GKVVVSSKIVKKAAFPAQSKKTTTFSTVNTRKTAR 90
>gi|34596192|gb|AAQ76786.1| 60S ribosomal protein L28 [Herdmania curvata]
Length = 118
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 13 NNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKRA-- 70
N + +L K ++ + F+ EP NL N S++++GL+H KT+ ++P + KG VTK+
Sbjct: 1 NRSCFLKKRND--QQFTTEPNNLKNKNSYRFNGLVHPKTVAVEPDPEGKGVVLVTKKKGY 58
Query: 71 TKKPTADNKGFACVT 85
+KP GF VT
Sbjct: 59 YRKP---QDGFNRVT 70
>gi|308503553|ref|XP_003113960.1| CRE-RPL-28 protein [Caenorhabditis remanei]
gi|308261345|gb|EFP05298.1| CRE-RPL-28 protein [Caenorhabditis remanei]
Length = 126
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S L+W +++NNNA+L I K FS E NL + S KYSGL + + + +A K
Sbjct: 1 MSDALVWQVIRNNNAFLRTQRGIGKRFSTEKFNLKKVNSPKYSGLANKHALDV--SAGAK 58
Query: 62 GFACVTKRATKKP 74
G TK +P
Sbjct: 59 GVVVSTKNEKGRP 71
>gi|299471186|emb|CBN79042.1| 60S ribosomal protein L28, putative [Ectocarpus siliculosus]
Length = 157
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSK-----EPGNLPNLASFKYSGLIHSKTIHIQP 56
VS+ L+W++V+ N +L K + K K EP NL N+ S+K SGL +SK + IQ
Sbjct: 4 VSNELVWSLVRRNTCFLYKRNGQTKRSGKVVLTAEPNNLTNVNSYKCSGLANSKAVGIQF 63
Query: 57 TADNKGFAC 65
D K C
Sbjct: 64 AKDAKDRPC 72
>gi|402086835|gb|EJT81733.1| ribosomal protein L28e [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 149
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 10/81 (12%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
VS+ LIW +V++ NA+L K I+ FS++P NL N S K++G +++K I +Q A
Sbjct: 4 VSADLIWEVVRSQNAFLEKRKTGGGIQ--FSRDPMNLVNKHSRKHAGFVNNKAIGVQ--A 59
Query: 59 DNKGFACVTKRATKKPTADNK 79
KG VT +KK A NK
Sbjct: 60 GEKGAVVVT---SKKADAANK 77
>gi|196000198|ref|XP_002109967.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588091|gb|EDV28133.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 140
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L+W +++ + A+ +K N F+KE NL N +++ SGL++ KT+ I P D K
Sbjct: 1 MSSDLLWEVLRKHTAFTVK--NQGTTFTKESNNLTNRHTYRCSGLVNKKTVGIAPNKDGK 58
Query: 62 GF 63
G
Sbjct: 59 GV 60
>gi|281209164|gb|EFA83339.1| S60 ribosomal protein L28 [Polysphondylium pallidum PN500]
Length = 138
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
+SS LIWN+++ NNA+ K K FS E GNL N S KYSGL + K + + A
Sbjct: 1 MSSELIWNVIRGNNAF--KITRGKTSFSSEAGNLRNKHSSKYSGLANRKVVDVNVNA 55
>gi|242824061|ref|XP_002488185.1| 60S ribosomal protein L28 [Talaromyces stipitatus ATCC 10500]
gi|218713106|gb|EED12531.1| 60S ribosomal protein L28 [Talaromyces stipitatus ATCC 10500]
Length = 155
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK-WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS+ L+W I +N NA+L++ +N FS++P N N+ S KY+G + K + +Q +++N
Sbjct: 8 VSADLVWQITRNQNAFLVQRNNAGGVRFSRDPLNPVNIHSRKYAGYANDKALGLQ-SSEN 66
Query: 61 KGFACVTKRAT 71
G + K A+
Sbjct: 67 GGVVLIAKNAS 77
>gi|413948281|gb|AFW80930.1| hypothetical protein ZEAMMB73_436369 [Zea mays]
Length = 73
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHS 49
V LIW IV+ NN++L+K N K F+KEP NL N+ S+KYSG++ S
Sbjct: 4 VPGDLIWQIVRKNNSFLVKQFGNGNAKVQFTKEPNNLYNVHSYKYSGMLLS 54
>gi|390135491|gb|AFL56726.1| large subunit ribosomal protein 28, partial [Pristionchus
arcanus]
Length = 127
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
+++NN+A++ + I+K FS+EP NL + S Y+GL ++K + DNK K+
Sbjct: 2 VIRNNSAFIRRQRGIQKAFSREPLNLKGINSPNYNGLTNAKAXGVTLAEDNKSVVVTVKK 61
Query: 70 ATKK 73
+ KK
Sbjct: 62 SGKK 65
>gi|150982176|gb|ABR87290.1| large subunit ribosomal protein 28 [Pristionchus sp. 10 RS5133]
Length = 126
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
I++ N+A+L + I K FS+EP NL + S Y+GL+++K + + DNK K+
Sbjct: 2 IIRQNSAFLRRQRGINKHFSREPLNLKGINSQFYNGLVNNKAVGVHLAEDNKSVVVSIKK 61
Query: 70 ATKKPTADNKGFACVT-----KRATKKTLSGHVDIGSARM 104
T K + K A T R K++ G V +AR+
Sbjct: 62 -TGKRSVPAKSIATTTIKRGGARGAIKSVHGLVKGANARL 100
>gi|449684079|ref|XP_004210536.1| PREDICTED: 60S ribosomal protein L28-like [Hydra magnipapillata]
gi|449684081|ref|XP_002160937.2| PREDICTED: 60S ribosomal protein L28-like isoform 1 [Hydra
magnipapillata]
Length = 133
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHI 54
+S+ L W++++ N+ +L+K+ + +KEP NL L SFKY+GL++ KT+ +
Sbjct: 1 MSAELCWSVLRKNSCFLVKSQGL--TLTKEPHNLTGLNSFKYNGLVNKKTVGV 51
>gi|150982188|gb|ABR87296.1| large subunit ribosomal protein 28 [Koerneria sp. RS1982]
Length = 125
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
I++NN+A++ + I K FS E N + S +Y+GLI+ K I ++ +ADNK TK
Sbjct: 2 IIRNNSAFIRRQRGIPKHFSTEAFNPKGVNSQRYNGLINKKAIDVKLSADNKSLVVSTKS 61
Query: 70 ATKKPTADNKGFACVTK--RATKKTL 93
++ A N + K RA KT+
Sbjct: 62 KNRQNPAKNTVTTTIQKKGRAILKTV 87
>gi|330842128|ref|XP_003293036.1| hypothetical protein DICPUDRAFT_92975 [Dictyostelium purpureum]
gi|325076668|gb|EGC30436.1| hypothetical protein DICPUDRAFT_92975 [Dictyostelium purpureum]
Length = 132
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHI 54
+SS LIWNIVK NNA+ ++ + S EPGNL N S KYSGL I +
Sbjct: 1 MSSDLIWNIVKKNNAFKIERNGT--VLSCEPGNLRNKHSIKYSGLARKNVIDV 51
>gi|392573232|gb|EIW66373.1| hypothetical protein TREMEDRAFT_41009 [Tremella mesenterica DSM
1558]
Length = 160
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W +++ N++ +K N K FSKE GNL NL S KYSGL +SK ++I A+
Sbjct: 1 MSTDLQWLLLRQWNSFQVKPKN-GKTFSKEKGNLLNLHSHKYSGLANSKVVNIDLAAE-- 57
Query: 62 GFACVTK-RATKKPTADNKGFACVTKR 87
G +TK + KPT VT R
Sbjct: 58 GNVVITKIKGDAKPTQVASARTHVTLR 84
>gi|449684083|ref|XP_004210537.1| PREDICTED: 60S ribosomal protein L28-like [Hydra magnipapillata]
Length = 125
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHI 54
+S+ L W++++ N+ +L+K+ + +KEP NL L SFKY+GL++ KT+ +
Sbjct: 1 MSAELCWSVLRKNSCFLVKSQGL--TLTKEPHNLTGLNSFKYNGLVNKKTVGV 51
>gi|430811904|emb|CCJ30659.1| unnamed protein product [Pneumocystis jirovecii]
Length = 149
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 4 SHLIWNIVKNNNAYLMKADNIKKWF-SKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
S L+W ++ N ++L+K + K F S+EP N N + YSGL + K + ++P +NKG
Sbjct: 12 SDLVWACLRKNASFLVKQKSGKPIFLSREPLNPLNKHMYIYSGLSNDKALSVEPNKNNKG 71
Query: 63 FACVTKRATKKPTADNKGFACVTKR 87
+ K +K T+ NK AC+ R
Sbjct: 72 IVLLVKNTSK--TSRNKP-ACLVNR 93
>gi|358399185|gb|EHK48528.1| hypothetical protein TRIATDRAFT_298008 [Trichoderma atroviride
IMI 206040]
Length = 159
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
+SS LIW +V++NN+YL K A N S++P NL N S KY+G ++ K + I +A
Sbjct: 8 ISSDLIWEVVRSNNSYLHKTGAASNGGIQLSRDPLNLTNKHSRKYAGFVNDKAVGI--SA 65
Query: 59 DNKG 62
KG
Sbjct: 66 GEKG 69
>gi|17563236|ref|NP_506180.1| Protein RPL-28 [Caenorhabditis elegans]
gi|24418647|sp|Q21930.3|RL28_CAEEL RecName: Full=60S ribosomal protein L28
gi|3879124|emb|CAA99898.1| Protein RPL-28 [Caenorhabditis elegans]
Length = 126
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S L+W +++NN+A+L I K FS E NL + S KYSGL + I + A K
Sbjct: 1 MSDALVWQVIRNNSAFLRTQRGIGKRFSTEKFNLKKVNSPKYSGLANKHAIDVSAAA--K 58
Query: 62 GFACVTKRATKKP 74
G TK +P
Sbjct: 59 GVVVSTKNEKGRP 71
>gi|432090447|gb|ELK23872.1| 60S ribosomal protein L28 [Myotis davidii]
Length = 113
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 29 SKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKRATKK 73
S+EP NL SF+Y+GLIH KT+ ++P D KG + KR + +
Sbjct: 56 SQEPNNLKARNSFRYNGLIHRKTVGVEPAPDGKGVVGIMKRRSGR 100
>gi|58264276|ref|XP_569294.1| 60s ribosomal protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107684|ref|XP_777453.1| hypothetical protein CNBB0270 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260145|gb|EAL22806.1| hypothetical protein CNBB0270 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223944|gb|AAW41987.1| 60s ribosomal protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 156
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W +V+N N++ +K + FS+E GNL N ++ KYSGL +SK + I P+A
Sbjct: 1 MSSDLTWLLVRNWNSFQVKGGH-GPVFSREKGNLLNKSAHKYSGLANSKVVSIHPSA--A 57
Query: 62 GFACVTK-RATKKPTADNKGFACVT-KRAT 89
G +TK +A KP + VT KR+T
Sbjct: 58 GGITITKIKADAKPNQVASARSHVTLKRST 87
>gi|405118794|gb|AFR93568.1| 60s ribosomal protein [Cryptococcus neoformans var. grubii H99]
Length = 156
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+SS L W +V+N N++ +K + FS+E GNL N ++ KYSGL +SK + I P+A
Sbjct: 1 MSSDLTWLLVRNWNSFQVKGGH-GPVFSREKGNLLNKSAHKYSGLANSKVVSIHPSA--A 57
Query: 62 GFACVTK-RATKKP 74
G +TK +A KP
Sbjct: 58 GGITITKIKADAKP 71
>gi|46111243|ref|XP_382679.1| hypothetical protein FG02503.1 [Gibberella zeae PH-1]
Length = 159
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKAD-NIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
+SS LIW IV++NN + K+ N FS++P NL N +S K++G ++ K + I A
Sbjct: 10 ISSDLIWEIVRDNNCFSAKSKKNGGVQFSRDPLNLTNKSSRKHAGFVNDKAVGI--AAGE 67
Query: 61 KGFACV-TKRATKKPTADN----KGFACVTKRATKKTLSGHVDIGSARMDARLYIFE 112
KG V TK+A A N + R T + ++ V S R D R E
Sbjct: 68 KGAVVVTTKKAQPNKPAQNITTTSYSGSKSNRKTYQAVANQVAKNSYRADLRSAAVE 124
>gi|408391750|gb|EKJ71118.1| hypothetical protein FPSE_08624 [Fusarium pseudograminearum CS3096]
Length = 159
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKAD-NIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
+SS LIW IV++NN + K+ N FS++P NL N +S K++G ++ K + I A
Sbjct: 10 ISSDLIWEIVRDNNCFSAKSKKNGGVQFSRDPLNLTNKSSRKHAGFVNDKAVGI--AAGE 67
Query: 61 KGFACV-TKRATKKPTADN----KGFACVTKRATKKTLSGHVDIGSARMDARLYIFE 112
KG V TK+A A N + R T + ++ V S R D R E
Sbjct: 68 KGAVVVTTKKAQPNKPAQNITTTSYSGSKSNRKTYQAVANQVAKNSYRADLRSAAVE 124
>gi|326438004|gb|EGD83574.1| hypothetical protein PTSG_12140 [Salpingoeca sp. ATCC 50818]
Length = 389
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 2 VSSHLIWNIVKNNNAYL-MKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
+SS L W IV+ N + + + + FSKEP NL N+ S ++SG++++K I ++ A
Sbjct: 1 MSSALQWKIVRKFNKFQHVNSSGDGRVFSKEPTNLKNINSPRFSGIVNAKAIGLK--AGP 58
Query: 61 KGFACVTKRATKKPTADNKGFACVTKR 87
KG A V + K KGF V R
Sbjct: 59 KGGAIVITKTKKAAVCPKKGFQGVALR 85
>gi|240277043|gb|EER40553.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
gi|325094981|gb|EGC48291.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 235
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
VS L+W I + N++L+K + FS++P NL N S KY+G +SK I I T +
Sbjct: 90 VSDDLVWEIARAQNSFLVKRPGCQ--FSRDPLNLANKHSRKYAGFANSKAIGIHLTEN-- 145
Query: 62 GFACVTKRATKKPTADNK 79
G VT TKKP NK
Sbjct: 146 GNVAVT---TKKPGMSNK 160
>gi|242824066|ref|XP_002488186.1| 60S ribosomal protein L28 [Talaromyces stipitatus ATCC 10500]
gi|218713107|gb|EED12532.1| 60S ribosomal protein L28 [Talaromyces stipitatus ATCC 10500]
Length = 124
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK-WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS+ L+W I +N NA+L++ +N FS++P N N+ S KY+G + K + +Q +++N
Sbjct: 8 VSADLVWQITRNQNAFLVQRNNAGGVRFSRDPLNPVNIHSRKYAGYANDKALGLQ-SSEN 66
Query: 61 KGFACVTKRAT 71
G + K A+
Sbjct: 67 GGVVLIAKNAS 77
>gi|358380048|gb|EHK17727.1| hypothetical protein TRIVIDRAFT_88756 [Trichoderma virens Gv29-8]
Length = 158
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
+SS LIW +V++NN+YL K N S++P NL N S KY+G ++ K + I A
Sbjct: 8 ISSDLIWEVVRSNNSYLHKTGARSNGGIQLSRDPLNLTNKHSRKYAGFVNDKAVGI--VA 65
Query: 59 DNKGFACV 66
+ KG V
Sbjct: 66 NEKGGVVV 73
>gi|159486697|ref|XP_001701374.1| ribosomal protein L28, component of cytosolic 80S ribosome and
60S large subunit [Chlamydomonas reinhardtii]
gi|158271676|gb|EDO97490.1| ribosomal protein L28 [Chlamydomonas reinhardtii]
Length = 177
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHI 54
+SS L+W +K +N+ L KA FS E GNL N S+KYSGL+++KT+ +
Sbjct: 1 MSSQLVWECIKGHNSKLRKAAK-GIVFSAEAGNLYNKHSYKYSGLVNAKTVDV 52
>gi|444724135|gb|ELW64753.1| 60S ribosomal protein L28 [Tupaia chinensis]
Length = 138
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 12/75 (16%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQP--------TADNK 61
+V+N +++L+K + K+ +S EP NL SF+Y+GLIH KT+ ++P AD K
Sbjct: 2 VVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAAGGKGVGAADGK 59
Query: 62 GFACVTKRAT--KKP 74
G V KR + +KP
Sbjct: 60 GVVVVMKRRSGQRKP 74
>gi|429856394|gb|ELA31303.1| 60s ribosomal protein l28 [Colletotrichum gloeosporioides Nara
gc5]
Length = 151
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 2 VSSHLIWNIVKNNNAYLM-KADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS+ LIW +V+N NAYL+ + D S++P NL N S KY+G ++ K I + P +
Sbjct: 8 VSADLIWEVVRNQNAYLVNRNDAGGLQLSRDPLNLVNKHSRKYAGFVNDKAIGVVP--NE 65
Query: 61 KGFACVTKRATKKPTADNKGFACVT 85
KG V + K +G VT
Sbjct: 66 KGGVKVISKNQKNANKPAQGTTEVT 90
>gi|395335014|gb|EJF67390.1| ribosomal protein L28e [Dichomitus squalens LYAD-421 SS1]
Length = 142
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S L W +++N NA+ +K S+EPGNL N+ S KYSGL + K I + T
Sbjct: 1 MSGDLQWLLLRNGNAFTVKRLPEGPILSREPGNLTNIHSHKYSGLANEKAIAV--TDSES 58
Query: 62 GFACVTKRATKKPTADNKGFACVTKRA 88
G ++ P A T R+
Sbjct: 59 GIKLTYRKKGAAPNAVRPALVTTTIRS 85
>gi|157093621|gb|ABV22465.1| ribosomal protein L28e [Oxyrrhis marina]
Length = 132
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 4 SHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+ L+W +KN+N Y +K+ N + EPGNL N+ +FKYSG K + + T D+K
Sbjct: 2 AELVWACMKNSNCYSLKSRNCA-TLTCEPGNLTNVHNFKYSGTAQDKAVSV--TCDDK 56
>gi|85109457|ref|XP_962926.1| hypothetical protein NCU06210 [Neurospora crassa OR74A]
gi|28924570|gb|EAA33690.1| predicted protein [Neurospora crassa OR74A]
Length = 150
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK-WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS+ LIW I +++N++L+K + FS++P NL N S KY+G ++ K + + P +
Sbjct: 6 VSADLIWEITRSHNSFLVKRKSGGGVQFSRDPLNLTNKHSRKYAGFVNDKAVGVVP-GEK 64
Query: 61 KGFACVTKRA--TKKPTA 76
G TK+A KP A
Sbjct: 65 GGVVVTTKKAGSINKPAA 82
>gi|398392892|ref|XP_003849905.1| hypothetical protein MYCGRDRAFT_74418 [Zymoseptoria tritici
IPO323]
gi|339469783|gb|EGP84881.1| hypothetical protein MYCGRDRAFT_74418 [Zymoseptoria tritici
IPO323]
Length = 157
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
+S+ LIW + +N+N++L+K D ++ FS++P NL N S KY G +++ I IQP
Sbjct: 8 LSTDLIWEVTRNSNSFLVKRKQGDRVQ--FSRDPLNLTNKHSRKYVGYANAQAIGIQP-- 63
Query: 59 DNKGFACVTK 68
D+ TK
Sbjct: 64 DSNTITVTTK 73
>gi|150982172|gb|ABR87288.1| large subunit ribosomal protein 28 [Pristionchus pauli]
Length = 126
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
I+++N+A+L + IKK FS EP NL + S Y+GLI+ + + DNK ++
Sbjct: 2 IIRSNSAFLRRQRGIKKHFSTEPLNLKAINSPSYNGLINKNAVGVTLAEDNKSVVVTMRK 61
Query: 70 ATKK 73
+ KK
Sbjct: 62 SGKK 65
>gi|224054432|ref|XP_002298257.1| predicted protein [Populus trichocarpa]
gi|118482187|gb|ABK93022.1| unknown [Populus trichocarpa]
gi|222845515|gb|EEE83062.1| predicted protein [Populus trichocarpa]
Length = 146
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
V LIW IVK NN++L+K FSKE NL NL S+K+SGL + KT+ IQP
Sbjct: 4 VPGQLIWEIVKKNNSFLVKQFGRGTASLQFSKENNNLYNLNSYKHSGLANKKTVTIQPAD 63
Query: 59 DNKGFACVTKRATKKPTADNKGFACVTKRATKKTLS 94
++ AT K NK A + K KK S
Sbjct: 64 KDQAVVL----ATTKTKKQNKPAALLHKSVMKKEFS 95
>gi|210075937|ref|XP_503934.2| YALI0E14212p [Yarrowia lipolytica]
gi|199426918|emb|CAG79527.2| YALI0E14212p [Yarrowia lipolytica CLIB122]
Length = 139
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 25/114 (21%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTI---HIQPTA 58
VS+ IW K+ NAYL+K I S++P L NL++ SGL H K + + +P+
Sbjct: 4 VSNDFIWECTKSTNAYLVKRKGIDTTLSRDPYALNNLSTHYESGLSHDKAVGVHYCKPS- 62
Query: 59 DNKGFACVTKRATK--------------KPTADNKGFACVTKRATKKTLSGHVD 98
G CV + K KPT ++ A +A KT+ G+ D
Sbjct: 63 ---GKICVITKVVKNANKPAKSRHIVEFKPTKSSRAIA----KAVSKTVQGYKD 109
>gi|212546201|ref|XP_002153254.1| 60S ribosomal protein L28 [Talaromyces marneffei ATCC 18224]
gi|210064774|gb|EEA18869.1| 60S ribosomal protein L28 [Talaromyces marneffei ATCC 18224]
Length = 155
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK-WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS+ L+W I +N NA+L++ N FS++P N N+ S KY+G + K + +Q ++N
Sbjct: 8 VSADLVWQITRNQNAFLVQRHNAGGVRFSRDPLNPVNVHSRKYAGYANDKALGLQ-ASEN 66
Query: 61 KGFACVTKRAT 71
G + K A+
Sbjct: 67 GGVVLIAKNAS 77
>gi|150982186|gb|ABR87295.1| large subunit ribosomal protein 28 [Pristionchus sp. 15 RS5229]
Length = 126
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 9 NIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTK 68
I++ N+ +L + I K FS+EP NL ++ S Y+GL++ K + +Q D K +
Sbjct: 1 QIIRQNSCFLRRQRGINKHFSREPLNLKSINSQAYNGLVNPKAVGVQLAEDKKSVVVTVR 60
Query: 69 RATKK 73
+A K
Sbjct: 61 KAGNK 65
>gi|67583170|ref|XP_664973.1| 60S ribosomal protein L28 [Cryptosporidium hominis TU502]
gi|54655225|gb|EAL34743.1| 60S ribosomal protein L28 [Cryptosporidium hominis]
Length = 127
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M+S+ L+W VK N +++ K++ F+ EP N+ NL + KYSGL ++I + ++
Sbjct: 1 MLSTELLWQCVKKNTSFIKKSNGF--TFTSEPFNIMNLNTLKYSGLAARRSISMDLVPNS 58
Query: 61 KGFACVTKRATKKPTADNKGFACVTKRATKKTLSG 95
G + TKK T + C K +K LS
Sbjct: 59 NGKLVKNAKITKKNTGSS-TIRCPKKLISKVNLSN 92
>gi|237837143|ref|XP_002367869.1| 60S ribosomal protein L28, putative [Toxoplasma gondii ME49]
gi|211965533|gb|EEB00729.1| 60S ribosomal protein L28, putative [Toxoplasma gondii ME49]
gi|221488880|gb|EEE27094.1| 60S ribosomal protein L28, putative [Toxoplasma gondii GT1]
gi|221509371|gb|EEE34940.1| 60S ribosomal protein L28, putative [Toxoplasma gondii VEG]
Length = 129
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
MVSS L+W V+ N+ ++ K + I S E NL N + KYSG+ H + + + N
Sbjct: 1 MVSSELLWQCVRRNHCFIRKFNGI--TLSAERMNLTNKNTLKYSGIAHKQPLGLNRHGAN 58
Query: 61 KG-FACVT----KRATKKPT 75
G A VT RA +KPT
Sbjct: 59 NGCIALVTVQKCSRAMRKPT 78
>gi|320588175|gb|EFX00650.1| 60S ribosomal protein l28 [Grosmannia clavigera kw1407]
Length = 152
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA-DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS+ L+W IV+ NA+L+K FS++P NL N S KY+G ++ K + + A+
Sbjct: 6 VSADLVWEIVRPQNAFLVKRITGGGAHFSRDPLNLTNEHSRKYAGFVNDKAVGVIAGAEG 65
Query: 61 KGFACVTK-RATKKP 74
G +TK +A KP
Sbjct: 66 -GVQVITKTKAQNKP 79
>gi|268556580|ref|XP_002636279.1| C. briggsae CBR-RPL-28 protein [Caenorhabditis briggsae]
Length = 126
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S L+W +++NN+A++ I K FS E NL + S KYSGL + I + +A K
Sbjct: 1 MSDALVWQVIRNNSAFIRTQRGIGKRFSTEKFNLKKVNSPKYSGLANKHAIDV--SAAPK 58
Query: 62 GFACVTKRATKKP 74
G TK +P
Sbjct: 59 GVVVSTKNEKGRP 71
>gi|150982162|gb|ABR87283.1| large subunit ribosomal protein 28 [Pristionchus sp. 3 CZ3975]
Length = 126
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
+++NN+A+L + I+K FS EP NL + S Y+GL++ + + DNK ++
Sbjct: 2 VIRNNSAFLRRQRGIQKKFSTEPLNLKAINSPSYNGLVNKNAVGVTLAEDNKSVVVSVRK 61
Query: 70 ATKK 73
+ KK
Sbjct: 62 SGKK 65
>gi|452982550|gb|EME82309.1| hypothetical protein MYCFIDRAFT_183074 [Pseudocercospora
fijiensis CIRAD86]
Length = 153
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK-WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
+S+ LIW + ++NN++L+K FS++P NL N S KYSG +++ I IQP D+
Sbjct: 7 LSNDLIWEVTRSNNSFLVKRKQSGGVQFSRDPLNLTNKHSRKYSGYANAQAIGIQP--DD 64
Query: 61 KGFACVTK 68
TK
Sbjct: 65 NTVTLTTK 72
>gi|401407627|ref|XP_003883262.1| hypothetical protein NCLIV_030170 [Neospora caninum Liverpool]
gi|325117679|emb|CBZ53230.1| hypothetical protein NCLIV_030170 [Neospora caninum Liverpool]
Length = 129
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHI-QPTAD 59
MVS+ L+W V+ N+ ++ K + I S E NL N + KYSG+ H + + + + A+
Sbjct: 1 MVSAELLWQCVRRNHCFIRKFNGI--TLSAERMNLANKNTLKYSGIAHKQPLGLNRHGAN 58
Query: 60 NKGFACVT----KRATKKPT 75
G A VT RA +KPT
Sbjct: 59 GGGIALVTVQKCSRAMRKPT 78
>gi|346322028|gb|EGX91627.1| 60S ribosomal protein L28 [Cordyceps militaris CM01]
Length = 156
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKAD-NIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VSS +IW IV++N+ +L K+ N FS +P NL N + K++G ++ K I + P
Sbjct: 9 VSSDIIWAIVRDNHCFLSKSRHNGGAQFSSDPLNLTNKNTRKHAGFVNDKAIGVVP--GE 66
Query: 61 KGFACVTKRATKKPTADNKGFACV------TKRATKKTLSGHVDIGSARMDARLYIFE 112
KG + + K T K F+ + R K+++ R D R Y E
Sbjct: 67 KGGLTILSKTIKNSTKPAKAFSQTKISGAKSTRKIYKSVANQATKTGYRADLRQYAVE 124
>gi|19114036|ref|NP_593124.1| ribosomal L28e protein family domain-containing protein
[Schizosaccharomyces pombe 972h-]
gi|3219966|sp|O14069.1|RL28E_SCHPO RecName: Full=Probable 60S ribosomal protein L28e
gi|4106660|emb|CAA22600.1| 60S ribosomal protein L28/L44 (predicted) [Schizosaccharomyces
pombe]
Length = 134
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK-WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS+ LIW ++++NN +L+K F++EP N+ + ++SGL + K + +Q +
Sbjct: 3 VSNDLIWQVIRDNNRFLVKRPEFGGIQFNREPVNVSGKNAQRFSGLCNDKAVGVQANSP- 61
Query: 61 KGFACVTKRATKKPTADNKGF-----ACVTKRATKKTLSGHVDIGSARMD 105
+G +TK K K F A + R T K+++G + R D
Sbjct: 62 RGVVLITKTNPKNAQKPAKLFRKDVIANASSRKTYKSIAGRIGRTGYRDD 111
>gi|149391307|gb|ABR25671.1| 60S ribosomal protein l28 [Oryza sativa Indica Group]
Length = 131
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 15 NAYLMKA---DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKRAT 71
N +L+K N K F+KEP NL N+ S+K+SGL + KT+ IQP+ ++ T
Sbjct: 1 NCFLVKQFGNSNAKVQFTKEPNNLYNVHSYKHSGLANKKTVTIQPSGGKDAAVVLSTTKT 60
Query: 72 KKPTADNKGF 81
KK A K +
Sbjct: 61 KKQNAPAKLY 70
>gi|336262075|ref|XP_003345823.1| hypothetical protein SMAC_07107 [Sordaria macrospora k-hell]
gi|380088597|emb|CCC13483.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 152
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMK-ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS+ LIW I ++ N+YL+K FS++P NL N + KY+G ++ K + + A
Sbjct: 6 VSADLIWEITRSQNSYLVKRTSGGGVQFSRDPLNLTNKHARKYAGFVNDKAVGV--VAGE 63
Query: 61 KGFACVTKR---ATKKPTA 76
KG VT + + KP+A
Sbjct: 64 KGGVVVTTKKAGSITKPSA 82
>gi|116191819|ref|XP_001221722.1| hypothetical protein CHGG_05627 [Chaetomium globosum CBS 148.51]
gi|88181540|gb|EAQ89008.1| hypothetical protein CHGG_05627 [Chaetomium globosum CBS 148.51]
Length = 149
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
VS+ LIW I +++N+YL+K + FS++P NL NL S K++G + K + I +A+ K
Sbjct: 4 VSADLIWEISRSSNSYLVKTRTGQ--FSRDPLNLTNLHSRKFAGFANDKALGI--SANEK 59
Query: 62 GFACVTKRATKKPTADNKGFACV 84
G V +KK + NK + V
Sbjct: 60 GGVQVI---SKKAASANKPASGV 79
>gi|391346080|ref|XP_003747307.1| PREDICTED: 60S ribosomal protein L28-like [Metaseiulus
occidentalis]
Length = 136
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S+ L W I++ + +++K KWFS +P N N+ K+SGL K + +
Sbjct: 1 MASADLCWQIMRVQSCHIVKKPQCSKWFSTDPLNPKNVHVRKFSGLSQKKALTVAANPKG 60
Query: 61 KGFACVTK 68
KG V K
Sbjct: 61 KGVVLVAK 68
>gi|310793183|gb|EFQ28644.1| ribosomal L28e family protein [Glomerella graminicola M1.001]
Length = 157
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 2 VSSHLIWNIVKNNNAYLM-KADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VSS LIW +V++ NA+L+ + D S++P NL N S KY+G ++ K I + P +
Sbjct: 8 VSSDLIWEVVRSQNAFLVNRNDAGGLQLSRDPLNLVNKHSRKYAGFVNDKAIGVVP--NE 65
Query: 61 KGFACVTKRATKKPTADNKGFACVT---KRATKKTLSG---HVDIGSARMDAR 107
KG V + K K VT ++ +KT S G R D R
Sbjct: 66 KGGVKVISKNQKNSNKPAKSLTEVTYGGNKSARKTYSAVARQAAAGGYRGDLR 118
>gi|225554262|gb|EEH02571.1| hypothetical protein HCBG_09188 [Ajellomyces capsulatus G186AR]
Length = 154
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
VS L+W I + N++L+K + FS++P NL N S KY+G +SK I I T +
Sbjct: 9 VSDDLVWEIARAQNSFLVKRPGCQ--FSRDPLNLANKHSRKYAGFANSKAIGIHLTEN-- 64
Query: 62 GFACVTKRATKKPTADNK 79
G V TKKP NK
Sbjct: 65 GNVSVP---TKKPGMSNK 79
>gi|350584235|ref|XP_003481700.1| PREDICTED: 60S ribosomal protein L28-like [Sus scrofa]
Length = 122
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 5 HLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
HL W +V+ +++L+K + K+ ++ EP NL SF Y+GLIH T+ ++P D +
Sbjct: 4 HLQWMVVQICSSFLIKKN--KQTYNMEPNNLKARYSFCYNGLIHHTTVGVEPADDKR 58
>gi|443724374|gb|ELU12412.1| hypothetical protein CAPTEDRAFT_105755, partial [Capitella
teleta]
Length = 101
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 28 FSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKRATKKPTADNKGFACVT-K 86
FS+EP NL + SF ++GLIH +T+ ++ KG VT+ A K KG + K
Sbjct: 1 FSREPNNLKSRHSFYHNGLIHPRTVGVEAAPGGKGVVLVTRNARKANNRPAKGVSRTELK 60
Query: 87 RATKKTL 93
R + TL
Sbjct: 61 RGQRATL 67
>gi|66357084|ref|XP_625720.1| 60S ribosomal protein L28 [Cryptosporidium parvum Iowa II]
gi|46226643|gb|EAK87622.1| 60S ribosomal protein L28 [Cryptosporidium parvum Iowa II]
Length = 127
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S+ L+W VK N +++ K + F+ EP N+ NL + KYSGL ++I + ++
Sbjct: 1 MFSTELLWQCVKKNTSFIKKNNGF--TFTSEPFNIMNLNTLKYSGLAARRSISMDLVPNS 58
Query: 61 KGFACVTKRATKKPTADNKGFACVTKRATKKTLSGH 96
G + TKK T + C K +K LS +
Sbjct: 59 NGKLVKNAKITKKNTGSS-TIRCPKKLISKVNLSNN 93
>gi|453083921|gb|EMF11966.1| 60S ribosomal protein L28 [Mycosphaerella populorum SO2202]
Length = 162
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
+SS LIW + +N N++L+K + FS++P NL N S KY G ++ K I I A
Sbjct: 8 LSSDLIWEVTRNTNSFLVKRRLGSGKQVVFSRDPLNLVNKHSRKYVGYVNDKAIGI--NA 65
Query: 59 DNKGFACVTKRATK--KPTA 76
D+ TK A++ KP A
Sbjct: 66 DDNTVLLTTKLASRGNKPAA 85
>gi|331225251|ref|XP_003325296.1| hypothetical protein PGTG_07129 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309304286|gb|EFP80877.1| hypothetical protein PGTG_07129 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 194
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
S+ L W +++ N+ ++K + FS E GNL N S +YSGL+H K + + P A + G
Sbjct: 63 SADLQWFLLRGWNSKVVKRGSAGFMFSSESGNLKNKHSPRYSGLVHPKPMAVTP-APSGG 121
Query: 63 FACVTKRATKKP 74
T++A+ P
Sbjct: 122 VLITTRKASANP 133
>gi|342884667|gb|EGU84872.1| hypothetical protein FOXB_04653 [Fusarium oxysporum Fo5176]
Length = 159
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKA-DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
+SS LIW IV++NN + K+ N FS++P NL N S K++G ++ K + I ++
Sbjct: 10 ISSDLIWEIVRDNNCFSAKSKKNGGVQFSRDPLNLTNKTSRKHAGFVNDKALGI--SSGE 67
Query: 61 KGFACVTKR 69
KG VT +
Sbjct: 68 KGAIVVTSK 76
>gi|302406042|ref|XP_003000857.1| 60S ribosomal protein L28 [Verticillium albo-atrum VaMs.102]
gi|261360115|gb|EEY22543.1| 60S ribosomal protein L28 [Verticillium albo-atrum VaMs.102]
Length = 158
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK--WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTAD 59
VS L+W + + +N++++K + FS++P NL N+ S K++G H K+I IQ +
Sbjct: 8 VSQDLVWELTRAHNSFIVKRKGLGNSVIFSRDPYNLTNIHSKKHAGYAHDKSISIQ-AGE 66
Query: 60 NKGFACVTKRATK 72
N V+K K
Sbjct: 67 NGAVQVVSKNEKK 79
>gi|149642005|ref|XP_001514647.1| PREDICTED: 60S ribosomal protein L28-like, partial
[Ornithorhynchus anatinus]
Length = 105
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 40 SFKYSGLIHSKTIHIQPTADNKGFACVTKR--ATKKP 74
SF+Y+GLIH KT+ ++P AD KG V KR +KP
Sbjct: 5 SFRYNGLIHRKTVGVEPAADGKGIVVVLKRRAGQRKP 41
>gi|346971374|gb|EGY14826.1| 60S ribosomal protein L28 [Verticillium dahliae VdLs.17]
Length = 158
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK--WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTAD 59
VS L+W + + +N++++K + FS++P NL N+ S K++G H K+I IQ +
Sbjct: 8 VSQDLVWELTRAHNSFIVKRKGLGNSVIFSRDPYNLTNIHSKKHAGYAHDKSISIQ-AGE 66
Query: 60 NKGFACVTKRATK 72
N V+K K
Sbjct: 67 NGAVQVVSKNEKK 79
>gi|402222782|gb|EJU02848.1| ribosomal protein L28e [Dacryopinax sp. DJM-731 SS1]
Length = 146
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S+ L W +++ N++++K FS E GNL NL S KYSG+ ++K + I A+ K
Sbjct: 1 MSADLEWLLIRKWNSFIVKRVPEGPVFSTEAGNLRNLHSGKYSGIANNKVLDI---AEEK 57
Query: 62 GFACVTKRATKKPTADNK 79
G + R P + NK
Sbjct: 58 GQIVIKTRDASAPISANK 75
>gi|400597081|gb|EJP64825.1| ribosomal L28e family protein [Beauveria bassiana ARSEF 2860]
Length = 156
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKA-DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VSS LIW IV++N+ +L K+ N FS +P NL N + K++G ++ K + + P
Sbjct: 9 VSSDLIWAIVRDNHCFLSKSRSNGGAQFSSDPLNLTNKNTRKHAGFVNDKALGVIP--GE 66
Query: 61 KGFACVTKRATKKPTADNKGFACVTKRATKKTLSGHVDIGSA------RMDARLYIFE 112
KG + + K T K F+ K T + + + R D R + E
Sbjct: 67 KGGLTILSKTIKNSTKPAKAFSKTNISGAKSTRKAYKAVANQSTRNGYRADLRQHAVE 124
>gi|327270134|ref|XP_003219846.1| PREDICTED: 60S ribosomal protein L28-like [Anolis carolinensis]
Length = 137
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 4 SHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGF 63
+H W V N +++L+K + K+ S + NL S Y+GLIH KT+ ++ D+KG
Sbjct: 3 AHRQWMTVHNCSSFLIKRN--KQMCSMKLNNLKACTSLCYNGLIHHKTVRVELATDDKGI 60
Query: 64 ACVTKR 69
V K+
Sbjct: 61 IVVLKK 66
>gi|328865453|gb|EGG13839.1| S60 ribosomal protein L28 [Dictyostelium fasciculatum]
Length = 342
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 4 SHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGF 63
S LI+ IVK+N+A+ ++ K S EPGNL N+ S K+S SK I I + K
Sbjct: 209 SDLIFQIVKHNHAFRKVSNG--KVLSAEPGNLRNVNSVKHSAFARSKNIDITTDKNGKVV 266
Query: 64 ACVTKRATKKPTADNKGFACV-----TKRATKKTLSGHV 97
+ +A+K A K F + + RAT KT+ V
Sbjct: 267 VAIKSKASKVSPA--KAFTKIPTNTSSYRATAKTIKNLV 303
>gi|239608887|gb|EEQ85874.1| ribosomal L28e protein [Ajellomyces dermatitidis ER-3]
gi|327357208|gb|EGE86065.1| ribosomal L28e protein [Ajellomyces dermatitidis ATCC 18188]
Length = 154
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S ++W I + N++++K ++ FS++P NL N S KY+G +SK I I T
Sbjct: 9 LSDDVVWEIARTQNSFMVKRAGVQ--FSRDPLNLVNKHSRKYAGFANSKAIGINAT--ES 64
Query: 62 GFACVTKRATKKP 74
G VT TKKP
Sbjct: 65 GNIAVT---TKKP 74
>gi|345560700|gb|EGX43825.1| hypothetical protein AOL_s00215g561 [Arthrobotrys oligospora ATCC
24927]
Length = 153
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Query: 2 VSSHLIWNIVKNNNAYLMK---ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTA 58
SS L+W I +NN+++L+K ++ S++P NL N+ S K++G I+++ I I P+
Sbjct: 5 ASSDLLWEITRNNSSFLVKRKTGSGVR--LSRDPLNLRNVHSRKHAGAINNQAIGIVPSG 62
Query: 59 DNKGFACVTKR 69
G + +TK+
Sbjct: 63 KG-GISLLTKK 72
>gi|261187648|ref|XP_002620243.1| ribosomal L28e protein [Ajellomyces dermatitidis SLH14081]
gi|239594134|gb|EEQ76715.1| ribosomal L28e protein [Ajellomyces dermatitidis SLH14081]
Length = 154
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S ++W I + N++++K ++ FS++P NL N S KY+G +SK I I A
Sbjct: 9 LSDDVVWEIARTQNSFMVKRAGVQ--FSRDPLNLVNKHSRKYAGFANSKAIGIN--ATES 64
Query: 62 GFACVTKRATKKP 74
G VT TKKP
Sbjct: 65 GNIAVT---TKKP 74
>gi|440797996|gb|ELR19070.1| ribosomal L28e protein family [Acanthamoeba castellanii str.
Neff]
Length = 154
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 28 FSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKRATKKPTADNK 79
FSKE GNL NL + ++SGL + I IQ +AD KG K + KP+ K
Sbjct: 12 FSKEAGNLRNLHARRFSGLAQRQAIDIQASADGKGVVLSVK--SSKPSLKRK 61
>gi|323449383|gb|EGB05271.1| hypothetical protein AURANDRAFT_54714 [Aureococcus
anophagefferens]
Length = 147
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 8 WNIVKNNNAYLMKADNIKKW---FSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
W V+N N+ L+K W + E GN+ N+ +FKYSGL + KTI I AD K
Sbjct: 10 WMYVRNCNSALVKRKEGTGWNLQLTAEKGNVMNVNAFKYSGLANEKTIAIDIGADGK 66
>gi|171686982|ref|XP_001908432.1| hypothetical protein [Podospora anserina S mat+]
gi|170943452|emb|CAP69105.1| unnamed protein product [Podospora anserina S mat+]
Length = 180
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMK-ADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS+ LIW + + NA+L+K ++ FS++P NL N+ S KY+G ++ K I + +N
Sbjct: 34 VSADLIWEVTRLQNAFLVKRKESGGIQFSRDPLNLTNVHSRKYAGYVNDKAIGVV-AGEN 92
Query: 61 KGFACVTKR--ATKKPTADNKGFACVTKRATKKT 92
++K+ A KP + +A +KT
Sbjct: 93 NTIQVISKKVSAGNKPASGRTVSTIGASKANRKT 126
>gi|145352429|ref|XP_001420551.1| Ribosomal protein L28, component of cytosolic 80S ribosome and
60S large subunit [Ostreococcus lucimarinus CCE9901]
gi|144580785|gb|ABO98844.1| Ribosomal protein L28, component of cytosolic 80S ribosome and
60S large subunit [Ostreococcus lucimarinus CCE9901]
Length = 121
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 2 VSSHLIWNIVKNNNAYLMKA-DNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
S +W + K +NA+ + FS EPGN+ SF+ SGL ++KTI I+
Sbjct: 7 ASDDFLWQVTKKHNAFTRASTSGHGARFSAEPGNVTAEVSFRASGLANAKTIDIREHDGG 66
Query: 61 KG 62
KG
Sbjct: 67 KG 68
>gi|301118444|ref|XP_002906950.1| ribosomal protein L28, putative [Phytophthora infestans T30-4]
gi|66270179|gb|AAY43419.1| ribosomal protein L28 [Phytophthora infestans]
gi|262108299|gb|EEY66351.1| ribosomal protein L28, putative [Phytophthora infestans T30-4]
Length = 139
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S L W + KN +++L+K + + F++E NL N KYSGL +K + I +
Sbjct: 1 MSSDTLTWLLTKNTSSFLVKRNGNE--FAREKFNLLNRNCRKYSGLASTKAVDISISDKK 58
Query: 61 KGFACVTKRATKKP 74
++ATKKP
Sbjct: 59 VTLTTKIEKATKKP 72
>gi|393218044|gb|EJD03532.1| hypothetical protein FOMMEDRAFT_82981 [Fomitiporia mediterranea
MF3/22]
Length = 145
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 6 LIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFAC 65
LIW + + +++Y++ A FS+EPGNL N+ S KYS + K + I G
Sbjct: 5 LIWLLTRKSSSYIVDAVPEGPIFSREPGNLLNIHSHKYSIIADPKPLSI--VDGPSGVEV 62
Query: 66 VTKRAT 71
VT++ +
Sbjct: 63 VTRKPS 68
>gi|388580741|gb|EIM21054.1| hypothetical protein WALSEDRAFT_46913 [Wallemia sebi CBS 633.66]
Length = 137
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIH-SKTIHIQPTADN 60
+S L W +++ +++++ + S EPGNL S+KYS I+ K + I+P
Sbjct: 1 MSGDLQWLLLRKSSSFIRPSAPESPLLSSEPGNLIAKHSYKYSSTINGQKALGIKP--QE 58
Query: 61 KGFACVTKRATKKPTAD-NKGFA 82
KG A + R TK P + NKGFA
Sbjct: 59 KG-ALIVARKTKSPINEWNKGFA 80
>gi|213402443|ref|XP_002171994.1| 60S ribosomal protein L28/L44 [Schizosaccharomyces japonicus
yFS275]
gi|212000041|gb|EEB05701.1| 60S ribosomal protein L28/L44 [Schizosaccharomyces japonicus
yFS275]
Length = 133
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK-WFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
VS+ L+W ++++NN +L+K + F++EP N + ++SGL K + +
Sbjct: 3 VSNDLVWQVIRDNNKFLVKRSDFGGIQFNREPLNATGKNAQRFSGLASDKAAGVVANSP- 61
Query: 61 KGFACVTKRATK---KPTA--DNKGFACVTKRATKKTLSGHVDIGSARMD 105
+G A +TK K KP FA + R T K ++ V R D
Sbjct: 62 RGVALITKTGVKNAQKPAKLYRTDVFAKSSTRKTYKAIANRVAKNGYRTD 111
>gi|344242640|gb|EGV98743.1| 60S ribosomal protein L28 [Cricetulus griseus]
Length = 122
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S HL +V+N +++L+K + K+ FS EP N P + +F L KT+ ++P A+ K
Sbjct: 1 MSVHLQRMVVQNCSSFLIKRN--KQTFSTEPNN-PKVRNFFLYNLETVKTVGVEPVANCK 57
Query: 62 GFACVTK 68
G V K
Sbjct: 58 GVVVVMK 64
>gi|380495556|emb|CCF32303.1| hypothetical protein CH063_04714 [Colletotrichum higginsianum]
Length = 86
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 VSSHLIWNIVKNNNAYLM-KADNIKKWFSKEPGNLPNLASFKYSGLIHSKT 51
VSS LIW +V++ NA+L+ + D S++P NL N S KY+G ++ K
Sbjct: 8 VSSDLIWEVVRSQNAFLVNRNDAGGXQLSRDPLNLVNKHSRKYAGFVNDKV 58
>gi|145528528|ref|XP_001450058.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417658|emb|CAK82661.1| unnamed protein product [Paramecium tetraurelia]
Length = 147
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN- 60
+S ++W +VK NNA+L+K + + S +P N + ++ +G I + + PT+
Sbjct: 1 MSQSVLWEVVKGNNAFLVKRNGL--TLSTDPFNNTGVQTYSSTGFISKNAVGVVPTSGKV 58
Query: 61 ---KGFACVTKRATKKPTADNKGFACVTKRATKKTLSGHVDIGSARMDARLYIFEMGLMS 117
V K++TK AD K + A+ + V S + R +GL
Sbjct: 59 NQINNINLVAKKSTKFQQADRKAKNTQSVYASTLAVKHGVHTASRVIRKRFGTSRLGLQK 118
Query: 118 A 118
A
Sbjct: 119 A 119
>gi|296195704|ref|XP_002745519.1| PREDICTED: 60S ribosomal protein L28-like [Callithrix jacchus]
Length = 172
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 40 SFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
SF Y+GLIH K + ++P AD+KG VTKR
Sbjct: 72 SFCYNGLIHRKYVGMEPAADSKGVLVVTKR 101
>gi|431900127|gb|ELK08055.1| 60S ribosomal protein L28 [Pteropus alecto]
Length = 117
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 10 IVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPT 57
+ +N +++L+K + K+ +S EP NL SF Y+GLIH K + ++P+
Sbjct: 2 VGRNCSSFLIKRN--KQTYSTEPNNLTACNSFHYTGLIHRKMVGVEPS 47
>gi|322711959|gb|EFZ03532.1| 60S ribosomal protein L28 [Metarhizium anisopliae ARSEF 23]
Length = 148
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 2 VSSHLIWNIVKNNNAYLMKAD-NIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
+SS L+W IV+NNN +L K++ N FS +P NL N + K G+I +
Sbjct: 9 MSSDLVWEIVRNNNCFLSKSNRNGGVQFSHDPLNLTNKNTRKAVGII----------PNE 58
Query: 61 KGFACVTKRATKKPTADNKGFACVTKRATK 90
KG V + T T K F T A K
Sbjct: 59 KGGVTVISKKTTDATKPAKAFIKTTHGANK 88
>gi|322702112|gb|EFY93860.1| 60S ribosomal protein L28 [Metarhizium acridum CQMa 102]
Length = 148
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKAD-NIKKWFSKEPGNLPNLASFKYSGLI 47
+SS L+W IV+NNN +L K++ N FS +P NL N + K G+I
Sbjct: 9 MSSDLVWEIVRNNNCFLSKSNRNGGVQFSHDPLNLTNKNTRKAVGII 55
>gi|354480715|ref|XP_003502550.1| PREDICTED: 60S ribosomal protein L28-like [Cricetulus griseus]
Length = 121
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNK 61
+S HL +V+N +++L+K + K+ FS EP N P + +F L +KT+ ++P A+ K
Sbjct: 1 MSVHLQRMVVQNCSSFLIKRN--KQTFSTEPNN-PKVRNFFLYNL-ETKTVGVEPVANCK 56
Query: 62 GFACVTK 68
G V K
Sbjct: 57 GVVVVMK 63
>gi|348665865|gb|EGZ05693.1| hypothetical protein PHYSODRAFT_341899 [Phytophthora sojae]
Length = 139
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M S L W + KN +++L+K + + F++E NL N KYSGL +K + +
Sbjct: 1 MSSDTLTWLLTKNTSSFLVKRNGNE--FAREKFNLLNRNCRKYSGLAATKAVDVSIADKK 58
Query: 61 KGFACVTKRATKKP 74
+ ++A KKP
Sbjct: 59 VTLSTKIEKAAKKP 72
>gi|328856324|gb|EGG05446.1| hypothetical protein MELLADRAFT_72153 [Melampsora larici-populina
98AG31]
Length = 133
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKG 62
S+ L W +++ N+ ++ I FS+E GNL N S++YSGL K + I TA KG
Sbjct: 6 SADLQWLLLRGWNSKMVSRGGIT--FSREAGNLKNYHSYRYSGLAQPKPLSI--TAAPKG 61
>gi|197286324|ref|YP_002152196.1| DNA helicase [Proteus mirabilis HI4320]
gi|194683811|emb|CAR44888.1| putative DNA helicase [Proteus mirabilis HI4320]
Length = 2140
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 18 LMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKRATKKPTAD 77
LM+ ++ W +PG L L +H A AC+ +R + D
Sbjct: 208 LMRPEDQSLWLHNQPGTLKYLVV---------DELHTFDGAQGSDLACLIRRLKFHLSVD 258
Query: 78 NKGFACVTKRAT 89
N+GFACV AT
Sbjct: 259 NQGFACVGTSAT 270
>gi|209879543|ref|XP_002141212.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209556818|gb|EEA06863.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 128
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGL 46
M S +IW VK N++++ K+ F+ EP N+ + S KYSGL
Sbjct: 1 MFPSEVIWQCVKRNSSFIYKSSGFT--FTCEPYNITAINSLKYSGL 44
>gi|325179774|emb|CCA14177.1| ribosomal protein L28 putative [Albugo laibachii Nc14]
Length = 159
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN 60
M + L W + KN +++L+K + + F+KE NL N KYSGL +K + I
Sbjct: 21 MSNDSLTWLLTKNTSSFLVKRNGNE--FAKEKFNLMNRNCRKYSGLAGNKAVDISLKDQK 78
Query: 61 KGFACVTKRATKKPTAD 77
+ +AT+KP +
Sbjct: 79 ISLSLKKVKATRKPVKN 95
>gi|145500012|ref|XP_001435990.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403127|emb|CAK68593.1| unnamed protein product [Paramecium tetraurelia]
Length = 147
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN- 60
+S ++W +VK NNA+L+K + + S +P N + ++ +G I I + PT
Sbjct: 1 MSQSVLWEVVKGNNAFLVKRNGL--TLSTDPFNNTGVQTYSSTGFITKNAIGVVPTQAKA 58
Query: 61 ---KGFACVTKRATKKPTADNK 79
V +++TK AD K
Sbjct: 59 NQINNVNLVARKSTKFQQADRK 80
>gi|67540660|ref|XP_664104.1| hypothetical protein AN6500.2 [Aspergillus nidulans FGSC A4]
gi|40738650|gb|EAA57840.1| hypothetical protein AN6500.2 [Aspergillus nidulans FGSC A4]
Length = 192
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKK-WFSKEPGNLPNLASFK 42
VSS L+W + +N NAYL+K + FS++P N+ N SFK
Sbjct: 8 VSSDLVWQLTRNQNAYLVKRNTHGGVQFSRDPLNVLNKHSFK 49
>gi|339236193|ref|XP_003379651.1| 60S ribosomal protein L28 [Trichinella spiralis]
gi|316977650|gb|EFV60722.1| 60S ribosomal protein L28 [Trichinella spiralis]
Length = 186
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 3 SSHLIWNIVKNNNAYLMKADNIKKWFSK-------EPGNLPNLASFKYSGLIHSKTIHIQ 55
SS + W +K +++++ NI F+ P NL + ++ GL+ + I +
Sbjct: 36 SSDIQWACIKKSSSFIHSRRNIGPKFTTVRTSLHLAPFNLTGIHCYRDCGLVRKRAIDVV 95
Query: 56 PTADNKGFACVTKR 69
P DNKG + V K+
Sbjct: 96 PEPDNKGLSFVYKK 109
>gi|344249085|gb|EGW05189.1| 60S ribosomal protein L28 [Cricetulus griseus]
Length = 107
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTI 52
+S+HL W +V++ +++L+K + K+ S EP NL SF Y+GLI K +
Sbjct: 1 MSAHLQWMVVQSCSSFLIKRN--KQTDSIEPNNLKARNSFCYNGLIPCKMV 49
>gi|145495129|ref|XP_001433558.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400676|emb|CAK66161.1| unnamed protein product [Paramecium tetraurelia]
Length = 147
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTADN- 60
+S ++W +VK NNA+L+K + + S +P N + ++ +G I + + T
Sbjct: 1 MSQQVLWEVVKGNNAFLVKRNGL--TLSTDPFNNTGVQTYSSTGFISKNAVGVVSTQGKV 58
Query: 61 ---KGFACVTKRATKKPTADNK 79
V K++TK AD K
Sbjct: 59 NQINNINLVAKKSTKFQQADRK 80
>gi|426201000|gb|EKV50923.1| hypothetical protein AGABI2DRAFT_189249 [Agaricus bisporus var.
bisporus H97]
Length = 143
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 28 FSKEPGNLPNLASFKYSGLIHSKTIHIQPTADNKGFACVTKR 69
F + GNL N+ SFKYSG ++KTI + +D+ G +T R
Sbjct: 25 FPRSQGNLRNIHSFKYSGFANAKTIDV---SDSNGAIRITTR 63
>gi|301776759|ref|XP_002923800.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L28-like
[Ailuropoda melanoleuca]
Length = 147
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQ 55
+S+HL W +V+N + L+K + K+ +S P + + SF Y+G IH K + ++
Sbjct: 1 MSTHLRWMVVQNCSGVLIKKN--KQTYSTCPNHPRDCNSFXYNGSIHCKMVGME 52
>gi|156087847|ref|XP_001611330.1| hypothetical protein [Babesia bovis T2Bo]
gi|154798584|gb|EDO07762.1| conserved hypothetical protein [Babesia bovis]
Length = 146
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 2 VSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQ 55
V L+W ++K NNAY+ K+ + + F+KE NL + YSGL+ + ++++
Sbjct: 23 VPDCLVWELIKKNNAYIFKSGH--ETFTKERYNLMARHTPMYSGLMQNSVMNLE 74
>gi|313245834|emb|CBY34824.1| unnamed protein product [Oikopleura dioica]
Length = 116
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 1 MVSSHLIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHIQPTAD 59
M +SHL W I+ +A+ +K + W +KEPG+L S +++ L+ K + + A+
Sbjct: 1 MSTSHLQWAIINKFSAFDVKRAG-RTW-TKEPGHLNGRKSLRFNTLVEKKGLKVAANAE 57
>gi|403222834|dbj|BAM40965.1| 60S ribosomal protein L28 [Theileria orientalis strain Shintoku]
Length = 140
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 6 LIWNIVKNNNAYLMKADNIKKWFSKEPGNLPNLASFKYSGLIHSKTIHI 54
L+W +V+NN+A+L K + FS E N+ +L S KY+G H + +
Sbjct: 20 LLWELVRNNHAHLKKTTTMN--FSLESHNVVSLHSPKYTGYAHKPLVDV 66
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.130 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,871,235,609
Number of Sequences: 23463169
Number of extensions: 69101370
Number of successful extensions: 136490
Number of sequences better than 100.0: 433
Number of HSP's better than 100.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 135881
Number of HSP's gapped (non-prelim): 457
length of query: 118
length of database: 8,064,228,071
effective HSP length: 85
effective length of query: 33
effective length of database: 6,069,858,706
effective search space: 200305337298
effective search space used: 200305337298
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)