Query psy6038
Match_columns 661
No_of_seqs 501 out of 3088
Neff 8.7
Searched_HMMs 29240
Date Sat Aug 17 00:56:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6038.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6038hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z3y_A Lysine-specific histone 100.0 8.6E-85 2.9E-89 747.7 58.5 613 33-653 1-662 (662)
2 2xag_A Lysine-specific histone 100.0 6.4E-83 2.2E-87 740.0 59.9 629 23-659 162-839 (852)
3 4gut_A Lysine-specific histone 100.0 1.3E-65 4.3E-70 592.2 45.5 532 15-647 215-775 (776)
4 1rsg_A FMS1 protein; FAD bindi 100.0 5.3E-50 1.8E-54 448.1 32.1 423 139-651 8-509 (516)
5 1s3e_A Amine oxidase [flavin-c 100.0 6.7E-44 2.3E-48 399.2 33.4 426 139-651 4-456 (520)
6 3k7m_X 6-hydroxy-L-nicotine ox 100.0 7.7E-44 2.6E-48 389.2 31.7 217 404-649 201-426 (431)
7 1b37_A Protein (polyamine oxid 100.0 1E-42 3.5E-47 384.9 35.9 416 138-651 3-460 (472)
8 2vvm_A Monoamine oxidase N; FA 100.0 3E-43 1E-47 391.5 29.9 417 140-658 40-493 (495)
9 2yg5_A Putrescine oxidase; oxi 100.0 2.3E-41 7.8E-46 372.1 26.0 419 139-649 5-451 (453)
10 2iid_A L-amino-acid oxidase; f 100.0 3.2E-41 1.1E-45 375.5 26.6 231 401-650 232-485 (498)
11 2jae_A L-amino acid oxidase; o 100.0 3E-39 1E-43 358.7 28.2 232 399-651 228-487 (489)
12 3ayj_A Pro-enzyme of L-phenyla 100.0 1.3E-36 4.5E-41 343.1 23.7 243 400-651 337-681 (721)
13 2ivd_A PPO, PPOX, protoporphyr 100.0 5.5E-34 1.9E-38 315.4 25.4 428 135-650 12-474 (478)
14 3i6d_A Protoporphyrinogen oxid 100.0 9.4E-34 3.2E-38 312.5 24.7 425 139-649 5-468 (470)
15 1sez_A Protoporphyrinogen oxid 100.0 2.2E-32 7.6E-37 304.6 22.2 428 138-651 12-495 (504)
16 3lov_A Protoporphyrinogen oxid 100.0 3.3E-31 1.1E-35 292.9 27.1 427 139-651 4-467 (475)
17 4dgk_A Phytoene dehydrogenase; 100.0 1.8E-27 6.3E-32 264.6 22.5 302 140-511 2-317 (501)
18 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 3.5E-27 1.2E-31 249.2 22.3 214 402-648 104-341 (342)
19 3nks_A Protoporphyrinogen oxid 100.0 9.2E-27 3.1E-31 257.3 25.7 416 139-648 2-473 (477)
20 3ka7_A Oxidoreductase; structu 99.9 2.3E-26 7.7E-31 250.3 22.6 394 140-646 1-424 (425)
21 4gde_A UDP-galactopyranose mut 99.9 2E-26 6.7E-31 256.9 16.9 408 138-647 9-477 (513)
22 2b9w_A Putative aminooxidase; 99.9 5.6E-26 1.9E-30 247.2 16.0 91 138-229 5-96 (424)
23 3nrn_A Uncharacterized protein 99.9 5.7E-23 2E-27 223.2 28.5 377 140-645 1-403 (421)
24 1yvv_A Amine oxidase, flavin-c 99.9 6.9E-23 2.3E-27 215.3 28.1 205 403-651 103-329 (336)
25 4dsg_A UDP-galactopyranose mut 99.9 5.4E-22 1.9E-26 219.0 27.0 407 138-646 8-452 (484)
26 1v0j_A UDP-galactopyranose mut 99.8 9.8E-21 3.4E-25 203.9 12.7 74 138-212 6-83 (399)
27 2e1m_C L-glutamate oxidase; L- 99.7 8.2E-19 2.8E-23 166.7 4.6 102 542-652 37-155 (181)
28 1i8t_A UDP-galactopyranose mut 99.7 5.1E-17 1.7E-21 172.8 16.2 72 140-212 2-74 (367)
29 2bi7_A UDP-galactopyranose mut 99.7 2E-16 6.8E-21 169.2 19.8 73 139-212 3-78 (384)
30 3kkj_A Amine oxidase, flavin-c 99.7 4.6E-15 1.6E-19 149.2 22.4 58 139-196 2-59 (336)
31 2e1m_A L-glutamate oxidase; L- 99.7 1.6E-15 5.6E-20 160.2 17.5 79 137-216 42-131 (376)
32 2bcg_G Secretory pathway GDP d 99.6 7.6E-15 2.6E-19 160.6 17.7 76 138-213 10-107 (453)
33 1d5t_A Guanine nucleotide diss 99.6 6.4E-15 2.2E-19 160.2 15.5 75 138-214 5-100 (433)
34 3hdq_A UDP-galactopyranose mut 99.6 5E-15 1.7E-19 157.8 12.7 75 137-212 27-103 (397)
35 3p1w_A Rabgdi protein; GDI RAB 99.5 3.8E-13 1.3E-17 146.1 18.1 74 138-213 19-112 (475)
36 2e1m_B L-glutamate oxidase; L- 99.4 2.8E-13 9.4E-18 119.6 6.9 90 451-560 3-93 (130)
37 2fq3_A Transcription regulator 99.4 1.6E-12 5.5E-17 108.2 8.3 85 40-128 16-102 (104)
38 2dce_A KIAA1915 protein; swirm 99.3 5.8E-12 2E-16 106.8 9.0 89 40-130 18-107 (111)
39 2vdc_G Glutamate synthase [NAD 99.2 2.8E-11 9.6E-16 131.9 9.5 105 73-179 51-162 (456)
40 1gte_A Dihydropyrimidine dehyd 99.0 6.7E-10 2.3E-14 132.8 11.4 151 73-229 108-285 (1025)
41 1vg0_A RAB proteins geranylger 98.9 4E-09 1.4E-13 117.9 13.7 46 138-183 7-52 (650)
42 3dje_A Fructosyl amine: oxygen 98.9 1.2E-08 3.9E-13 110.8 15.2 42 138-179 5-47 (438)
43 3fpz_A Thiazole biosynthetic e 98.9 1.3E-09 4.5E-14 113.6 5.5 87 84-179 19-107 (326)
44 3ps9_A TRNA 5-methylaminomethy 98.8 8.3E-08 2.8E-12 110.1 18.1 40 138-177 271-310 (676)
45 3nyc_A D-arginine dehydrogenas 98.8 5E-08 1.7E-12 103.3 14.3 42 137-179 7-48 (381)
46 3dme_A Conserved exported prot 98.8 9.5E-08 3.2E-12 100.5 16.0 40 139-178 4-43 (369)
47 3pvc_A TRNA 5-methylaminomethy 98.8 1.3E-07 4.5E-12 108.6 18.0 41 138-178 263-303 (689)
48 3v76_A Flavoprotein; structura 98.7 4.7E-08 1.6E-12 105.2 12.9 42 138-179 26-67 (417)
49 3rp8_A Flavoprotein monooxygen 98.6 2E-07 7E-12 99.9 14.2 41 135-175 19-59 (407)
50 2vou_A 2,6-dihydroxypyridine h 98.6 4.5E-07 1.6E-11 96.9 13.9 37 138-174 4-40 (397)
51 2i0z_A NAD(FAD)-utilizing dehy 98.6 2.5E-07 8.4E-12 100.7 11.8 42 137-178 24-65 (447)
52 2xdo_A TETX2 protein; tetracyc 98.5 4.7E-07 1.6E-11 96.8 13.7 41 137-177 24-64 (398)
53 4hb9_A Similarities with proba 98.5 6.6E-07 2.3E-11 95.5 14.4 36 140-175 2-37 (412)
54 2bry_A NEDD9 interacting prote 98.4 8.6E-08 2.9E-12 105.7 2.9 103 74-176 14-129 (497)
55 3fmw_A Oxygenase; mithramycin, 98.4 1.4E-06 4.8E-11 97.5 12.1 38 138-175 48-85 (570)
56 3ef6_A Toluene 1,2-dioxygenase 98.4 1.8E-06 6.2E-11 92.6 12.4 38 140-177 3-42 (410)
57 3oz2_A Digeranylgeranylglycero 98.3 2.7E-07 9.2E-12 97.9 5.3 39 139-177 4-42 (397)
58 3nlc_A Uncharacterized protein 98.3 5.2E-08 1.8E-12 107.9 -0.6 106 73-178 27-146 (549)
59 3lxd_A FAD-dependent pyridine 98.3 1.5E-06 5.1E-11 93.4 10.6 40 138-177 8-49 (415)
60 3ihg_A RDME; flavoenzyme, anth 98.3 9.7E-07 3.3E-11 98.3 9.4 38 138-175 4-41 (535)
61 1mo9_A ORF3; nucleotide bindin 98.3 6.3E-07 2.1E-11 99.5 7.5 75 105-179 8-83 (523)
62 3e1t_A Halogenase; flavoprotei 98.3 2.8E-06 9.7E-11 93.9 12.0 36 139-174 7-42 (512)
63 3fg2_P Putative rubredoxin red 98.3 2.9E-06 9.9E-11 90.9 11.7 39 139-177 1-41 (404)
64 4gcm_A TRXR, thioredoxin reduc 98.3 5.5E-07 1.9E-11 92.7 5.2 41 138-179 5-45 (312)
65 1pj5_A N,N-dimethylglycine oxi 98.2 4.3E-06 1.5E-10 98.0 12.9 37 138-174 3-40 (830)
66 4a5l_A Thioredoxin reductase; 98.2 7.5E-07 2.6E-11 91.6 5.1 42 139-180 4-49 (314)
67 3itj_A Thioredoxin reductase 1 98.2 6.7E-07 2.3E-11 92.8 4.4 46 135-180 18-67 (338)
68 4fk1_A Putative thioredoxin re 98.1 1.1E-06 3.9E-11 90.1 4.6 41 137-178 4-44 (304)
69 2gjc_A Thiazole biosynthetic e 98.1 2.5E-07 8.4E-12 95.3 -1.0 40 139-178 65-106 (326)
70 3urh_A Dihydrolipoyl dehydroge 98.1 1.7E-06 5.8E-11 95.2 4.7 43 137-179 23-65 (491)
71 3jsk_A Cypbp37 protein; octame 98.1 2E-06 6.8E-11 89.0 4.9 42 138-179 78-121 (344)
72 1q1r_A Putidaredoxin reductase 98.1 3E-05 1E-09 83.7 14.3 38 139-176 4-43 (431)
73 1w4x_A Phenylacetone monooxyge 98.1 2.7E-06 9.1E-11 94.8 5.8 49 138-186 15-63 (542)
74 3k30_A Histamine dehydrogenase 98.1 2.6E-06 8.9E-11 97.7 5.9 45 136-180 388-432 (690)
75 4ap3_A Steroid monooxygenase; 98.1 2.3E-06 7.9E-11 95.3 5.1 53 138-190 20-72 (549)
76 3lzw_A Ferredoxin--NADP reduct 98.1 2E-06 6.9E-11 88.9 4.3 41 139-179 7-47 (332)
77 3f8d_A Thioredoxin reductase ( 98.0 2.5E-06 8.7E-11 87.7 5.0 41 138-180 14-54 (323)
78 3uox_A Otemo; baeyer-villiger 98.0 3E-06 1E-10 94.3 5.7 53 138-190 8-60 (545)
79 2gv8_A Monooxygenase; FMO, FAD 98.0 3.4E-06 1.2E-10 91.6 6.0 42 138-179 5-48 (447)
80 1ryi_A Glycine oxidase; flavop 98.0 2.8E-06 9.5E-11 89.9 5.1 41 136-176 14-54 (382)
81 3r9u_A Thioredoxin reductase; 98.0 2.5E-06 8.4E-11 87.5 4.5 42 138-180 3-45 (315)
82 2zbw_A Thioredoxin reductase; 98.0 2.5E-06 8.7E-11 88.5 4.1 41 139-179 5-45 (335)
83 3ab1_A Ferredoxin--NADP reduct 98.0 3E-06 1E-10 89.1 4.6 42 138-179 13-54 (360)
84 2q7v_A Thioredoxin reductase; 98.0 3.3E-06 1.1E-10 87.3 4.4 42 138-180 7-48 (325)
85 4a9w_A Monooxygenase; baeyer-v 98.0 4.2E-06 1.4E-10 87.3 5.2 41 139-179 3-43 (357)
86 3cgv_A Geranylgeranyl reductas 98.0 4.1E-06 1.4E-10 89.0 5.2 39 139-177 4-42 (397)
87 1rp0_A ARA6, thiazole biosynth 98.0 3.5E-06 1.2E-10 85.6 4.4 40 139-178 39-79 (284)
88 1o94_A Tmadh, trimethylamine d 98.0 5.9E-06 2E-10 95.3 6.8 45 136-180 386-430 (729)
89 1d4d_A Flavocytochrome C fumar 98.0 1.2E-06 4.1E-11 98.2 0.9 96 81-178 55-165 (572)
90 3o0h_A Glutathione reductase; 98.0 3.6E-06 1.2E-10 92.4 4.2 40 139-179 26-65 (484)
91 3cty_A Thioredoxin reductase; 98.0 4.5E-06 1.5E-10 86.0 4.8 42 138-180 15-56 (319)
92 3l8k_A Dihydrolipoyl dehydroge 98.0 3.7E-06 1.3E-10 91.8 4.3 41 139-179 4-44 (466)
93 2oln_A NIKD protein; flavoprot 98.0 4.4E-06 1.5E-10 89.0 4.8 37 139-175 4-40 (397)
94 3gwf_A Cyclohexanone monooxyge 97.9 4.8E-06 1.6E-10 92.6 5.0 50 139-188 8-58 (540)
95 2xve_A Flavin-containing monoo 97.9 6E-06 2.1E-10 90.1 5.7 41 140-180 3-49 (464)
96 2gf3_A MSOX, monomeric sarcosi 97.9 6.5E-06 2.2E-10 87.3 5.6 37 139-175 3-39 (389)
97 2gqf_A Hypothetical protein HI 97.9 5.6E-06 1.9E-10 88.5 4.9 41 139-179 4-44 (401)
98 2qae_A Lipoamide, dihydrolipoy 97.9 4.7E-06 1.6E-10 91.1 4.4 41 139-179 2-42 (468)
99 4dna_A Probable glutathione re 97.9 4.2E-06 1.4E-10 91.3 4.0 40 139-179 5-44 (463)
100 2uzz_A N-methyl-L-tryptophan o 97.9 5.2E-06 1.8E-10 87.5 4.5 39 139-177 2-40 (372)
101 3qfa_A Thioredoxin reductase 1 97.9 7E-06 2.4E-10 90.9 5.7 43 137-179 30-80 (519)
102 4at0_A 3-ketosteroid-delta4-5a 97.9 6.4E-06 2.2E-10 91.0 5.2 41 138-178 40-80 (510)
103 1y0p_A Fumarate reductase flav 97.9 7.1E-06 2.4E-10 92.0 5.6 41 138-178 125-165 (571)
104 3lad_A Dihydrolipoamide dehydr 97.9 7.1E-06 2.4E-10 89.8 5.4 41 138-178 2-42 (476)
105 3alj_A 2-methyl-3-hydroxypyrid 97.9 9.1E-06 3.1E-10 86.1 5.9 38 139-176 11-48 (379)
106 1c0p_A D-amino acid oxidase; a 97.9 9.3E-06 3.2E-10 85.4 5.8 39 138-176 5-43 (363)
107 1dxl_A Dihydrolipoamide dehydr 97.9 7.6E-06 2.6E-10 89.4 5.3 42 138-179 5-46 (470)
108 1y56_B Sarcosine oxidase; dehy 97.9 1.1E-05 3.6E-10 85.5 5.9 38 138-176 4-41 (382)
109 3nix_A Flavoprotein/dehydrogen 97.9 8E-06 2.7E-10 87.7 4.9 36 139-174 5-40 (421)
110 3fbs_A Oxidoreductase; structu 97.8 9.1E-06 3.1E-10 82.4 4.7 38 139-176 2-39 (297)
111 2gag_B Heterotetrameric sarcos 97.8 1E-05 3.5E-10 86.2 5.2 40 137-176 19-60 (405)
112 1qo8_A Flavocytochrome C3 fuma 97.8 7.8E-06 2.7E-10 91.6 4.4 41 138-178 120-160 (566)
113 2q0l_A TRXR, thioredoxin reduc 97.8 1.1E-05 3.8E-10 82.6 5.3 40 140-180 2-42 (311)
114 3c96_A Flavin-containing monoo 97.8 1.2E-05 4.1E-10 86.1 5.7 37 139-175 4-41 (410)
115 3dk9_A Grase, GR, glutathione 97.8 6.5E-06 2.2E-10 90.2 3.6 41 138-179 19-59 (478)
116 2a87_A TRXR, TR, thioredoxin r 97.8 8.9E-06 3E-10 84.5 4.5 42 137-179 12-53 (335)
117 2yqu_A 2-oxoglutarate dehydrog 97.8 8E-06 2.7E-10 88.9 4.3 40 140-179 2-41 (455)
118 3d1c_A Flavin-containing putat 97.8 8.6E-06 3E-10 85.6 4.4 40 139-179 4-44 (369)
119 1zmd_A Dihydrolipoyl dehydroge 97.8 6.4E-06 2.2E-10 90.1 3.5 42 138-179 5-46 (474)
120 2qa1_A PGAE, polyketide oxygen 97.8 1.3E-05 4.3E-10 88.4 5.7 41 136-176 8-48 (500)
121 3dgz_A Thioredoxin reductase 2 97.8 9.6E-06 3.3E-10 89.1 4.6 42 138-179 5-54 (488)
122 1vdc_A NTR, NADPH dependent th 97.8 1E-05 3.4E-10 83.9 4.5 42 139-180 8-53 (333)
123 3ihm_A Styrene monooxygenase A 97.8 9.2E-06 3.1E-10 87.7 4.4 35 138-172 21-55 (430)
124 3c4a_A Probable tryptophan hyd 97.8 1.2E-05 4.2E-10 85.2 5.1 35 140-174 1-37 (381)
125 2gmh_A Electron transfer flavo 97.8 1.3E-05 4.4E-10 90.0 5.3 41 138-178 34-80 (584)
126 1v59_A Dihydrolipoamide dehydr 97.8 9.3E-06 3.2E-10 88.9 4.1 41 139-179 5-45 (478)
127 1zk7_A HGII, reductase, mercur 97.8 1.2E-05 4.2E-10 87.7 4.9 41 138-179 3-43 (467)
128 2cul_A Glucose-inhibited divis 97.8 1.7E-05 5.7E-10 78.0 5.3 35 139-173 3-37 (232)
129 1ps9_A 2,4-dienoyl-COA reducta 97.8 1.7E-05 5.9E-10 90.6 6.1 44 136-179 370-413 (671)
130 1lvl_A Dihydrolipoamide dehydr 97.8 9.6E-06 3.3E-10 88.3 3.8 40 139-179 5-44 (458)
131 2qa2_A CABE, polyketide oxygen 97.8 1.5E-05 5E-10 87.8 5.3 39 137-175 10-48 (499)
132 1trb_A Thioredoxin reductase; 97.8 1.2E-05 4E-10 82.8 4.2 40 139-179 5-44 (320)
133 2r0c_A REBC; flavin adenine di 97.8 1.4E-05 4.7E-10 89.2 4.9 39 138-176 25-63 (549)
134 3i3l_A Alkylhalidase CMLS; fla 97.8 2E-05 7E-10 88.3 6.4 39 138-176 22-60 (591)
135 3g3e_A D-amino-acid oxidase; F 97.8 9.8E-06 3.3E-10 84.8 3.5 37 140-176 1-43 (351)
136 1k0i_A P-hydroxybenzoate hydro 97.8 1.4E-05 4.7E-10 85.1 4.7 36 139-174 2-37 (394)
137 3da1_A Glycerol-3-phosphate de 97.8 1.5E-05 5.3E-10 88.9 5.2 41 138-178 17-57 (561)
138 2r9z_A Glutathione amide reduc 97.8 1.3E-05 4.3E-10 87.5 4.4 41 138-179 3-43 (463)
139 3ic9_A Dihydrolipoamide dehydr 97.8 1.2E-05 4.2E-10 88.3 4.2 40 139-179 8-47 (492)
140 3dgh_A TRXR-1, thioredoxin red 97.8 1.6E-05 5.6E-10 87.1 5.1 34 137-170 7-40 (483)
141 1fec_A Trypanothione reductase 97.7 1.3E-05 4.3E-10 88.2 4.1 41 139-179 3-52 (490)
142 2hqm_A GR, grase, glutathione 97.7 1.2E-05 4E-10 88.2 3.7 41 138-179 10-50 (479)
143 1ojt_A Surface protein; redox- 97.7 1.3E-05 4.6E-10 87.8 4.1 41 139-179 6-46 (482)
144 1ges_A Glutathione reductase; 97.7 1.1E-05 3.9E-10 87.5 3.5 40 139-179 4-43 (450)
145 2x3n_A Probable FAD-dependent 97.7 1.7E-05 5.7E-10 84.6 4.7 36 139-174 6-41 (399)
146 2qcu_A Aerobic glycerol-3-phos 97.7 2.4E-05 8.2E-10 86.2 5.7 38 139-176 3-40 (501)
147 3atr_A Conserved archaeal prot 97.7 1.6E-05 5.6E-10 86.3 4.2 36 139-174 6-41 (453)
148 1ebd_A E3BD, dihydrolipoamide 97.7 1.5E-05 5.3E-10 86.6 3.9 40 139-179 3-42 (455)
149 1xdi_A RV3303C-LPDA; reductase 97.7 1.2E-05 4.1E-10 88.6 3.0 40 139-179 2-44 (499)
150 3c4n_A Uncharacterized protein 97.7 1.9E-05 6.5E-10 84.5 4.5 38 139-176 36-75 (405)
151 1fl2_A Alkyl hydroperoxide red 97.7 2.3E-05 8E-10 80.1 4.8 38 140-179 2-39 (310)
152 1onf_A GR, grase, glutathione 97.7 1.9E-05 6.6E-10 86.9 4.4 40 139-179 2-41 (500)
153 2a8x_A Dihydrolipoyl dehydroge 97.7 1.9E-05 6.6E-10 86.0 4.1 39 140-179 4-42 (464)
154 3axb_A Putative oxidoreductase 97.7 1.7E-05 5.7E-10 86.1 3.4 39 138-176 22-61 (448)
155 2rgh_A Alpha-glycerophosphate 97.7 3.4E-05 1.2E-09 86.3 5.8 38 139-176 32-69 (571)
156 2gag_A Heterotetrameric sarcos 97.6 2.8E-05 9.4E-10 92.4 5.1 41 139-179 128-168 (965)
157 1cjc_A Protein (adrenodoxin re 97.6 3.1E-05 1.1E-09 84.2 4.9 42 138-179 5-48 (460)
158 2wpf_A Trypanothione reductase 97.6 1.9E-05 6.4E-10 86.9 3.2 41 139-179 7-56 (495)
159 2eq6_A Pyruvate dehydrogenase 97.6 2.4E-05 8.2E-10 85.3 3.9 40 139-179 6-45 (464)
160 1lqt_A FPRA; NADP+ derivative, 97.6 2.4E-05 8.1E-10 85.1 3.7 41 139-179 3-50 (456)
161 3oc4_A Oxidoreductase, pyridin 97.6 3.6E-05 1.2E-09 83.6 4.9 36 140-175 3-40 (452)
162 3g5s_A Methylenetetrahydrofola 97.6 5.5E-05 1.9E-09 78.9 5.9 40 140-179 2-41 (443)
163 3pl8_A Pyranose 2-oxidase; sub 97.6 4E-05 1.4E-09 86.6 5.3 41 138-178 45-85 (623)
164 3ics_A Coenzyme A-disulfide re 97.6 4E-05 1.4E-09 86.2 5.3 40 136-175 33-74 (588)
165 3ces_A MNMG, tRNA uridine 5-ca 97.6 3.2E-05 1.1E-09 86.5 4.4 38 138-175 27-65 (651)
166 2wdq_A Succinate dehydrogenase 97.6 3.6E-05 1.2E-09 86.4 4.7 39 139-177 7-45 (588)
167 1chu_A Protein (L-aspartate ox 97.6 4E-05 1.4E-09 85.1 4.9 39 138-177 7-45 (540)
168 2e5v_A L-aspartate oxidase; ar 97.6 4.8E-05 1.6E-09 83.0 5.5 36 141-177 1-36 (472)
169 1y56_A Hypothetical protein PH 97.6 2.7E-05 9.2E-10 85.6 3.5 41 139-180 108-148 (493)
170 2ywl_A Thioredoxin reductase r 97.6 5.1E-05 1.7E-09 71.0 4.8 33 140-172 2-34 (180)
171 3s5w_A L-ornithine 5-monooxyge 97.6 3.6E-05 1.2E-09 83.8 4.3 38 139-176 30-72 (463)
172 1hyu_A AHPF, alkyl hydroperoxi 97.6 5E-05 1.7E-09 84.0 5.3 41 137-179 210-250 (521)
173 2bs2_A Quinol-fumarate reducta 97.5 4.4E-05 1.5E-09 86.5 4.8 39 139-177 5-43 (660)
174 2h88_A Succinate dehydrogenase 97.5 4.5E-05 1.5E-09 85.9 4.7 40 138-177 17-56 (621)
175 3h28_A Sulfide-quinone reducta 97.5 4.7E-05 1.6E-09 82.1 4.7 39 139-177 2-42 (430)
176 2aqj_A Tryptophan halogenase, 97.5 6.1E-05 2.1E-09 83.7 5.5 35 139-173 5-42 (538)
177 3kd9_A Coenzyme A disulfide re 97.5 5.9E-05 2E-09 81.8 5.2 39 139-177 3-43 (449)
178 3iwa_A FAD-dependent pyridine 97.5 4.3E-05 1.5E-09 83.4 4.1 37 139-175 3-41 (472)
179 2x8g_A Thioredoxin glutathione 97.5 6E-05 2.1E-09 84.9 5.0 35 137-171 105-139 (598)
180 2dkh_A 3-hydroxybenzoate hydro 97.5 5.4E-05 1.9E-09 85.9 4.6 37 139-175 32-69 (639)
181 2zxi_A TRNA uridine 5-carboxym 97.5 7.4E-05 2.5E-09 83.3 5.4 39 138-176 26-65 (637)
182 3cp8_A TRNA uridine 5-carboxym 97.5 7.2E-05 2.5E-09 83.6 4.9 39 138-176 20-59 (641)
183 3h8l_A NADH oxidase; membrane 97.5 4.9E-05 1.7E-09 81.3 3.5 38 140-177 2-42 (409)
184 2pyx_A Tryptophan halogenase; 97.5 7.3E-05 2.5E-09 82.8 5.0 36 138-173 6-53 (526)
185 4b1b_A TRXR, thioredoxin reduc 97.4 6E-05 2E-09 83.5 4.1 40 139-178 42-89 (542)
186 1jnr_A Adenylylsulfate reducta 97.4 7.1E-05 2.4E-09 84.9 4.7 37 138-174 21-61 (643)
187 2weu_A Tryptophan 5-halogenase 97.4 5.7E-05 2E-09 83.3 3.8 35 139-173 2-39 (511)
188 2e4g_A Tryptophan halogenase; 97.4 9.8E-05 3.3E-09 82.3 5.5 35 138-172 24-61 (550)
189 1kf6_A Fumarate reductase flav 97.4 7.6E-05 2.6E-09 83.9 4.3 39 139-177 5-45 (602)
190 3klj_A NAD(FAD)-dependent dehy 97.4 0.00012 4E-09 77.7 5.1 40 137-176 7-46 (385)
191 3ntd_A FAD-dependent pyridine 97.3 0.00012 4E-09 81.9 4.9 36 140-175 2-39 (565)
192 2cdu_A NADPH oxidase; flavoenz 97.3 0.00012 4.1E-09 79.4 4.8 37 140-176 1-39 (452)
193 1nhp_A NADH peroxidase; oxidor 97.3 0.00012 4.2E-09 79.2 4.8 37 140-176 1-39 (447)
194 3vrd_B FCCB subunit, flavocyto 97.3 0.00012 4E-09 78.0 4.5 37 139-175 2-40 (401)
195 3gyx_A Adenylylsulfate reducta 97.3 0.00013 4.5E-09 82.6 5.1 38 139-176 22-65 (662)
196 3cgb_A Pyridine nucleotide-dis 97.3 0.00014 4.8E-09 79.6 5.0 38 139-176 36-75 (480)
197 1pn0_A Phenol 2-monooxygenase; 97.3 0.00015 5.3E-09 82.5 5.5 36 139-174 8-48 (665)
198 1m6i_A Programmed cell death p 97.3 0.00013 4.4E-09 80.1 4.3 39 137-175 9-49 (493)
199 2gqw_A Ferredoxin reductase; f 97.3 0.00018 6.1E-09 76.9 5.1 38 138-175 6-45 (408)
200 1xhc_A NADH oxidase /nitrite r 97.3 0.00018 6.1E-09 75.8 4.9 37 138-175 7-43 (367)
201 2bc0_A NADH oxidase; flavoprot 97.3 0.00017 5.7E-09 79.2 4.8 39 138-176 34-75 (490)
202 2v3a_A Rubredoxin reductase; a 97.2 0.00022 7.7E-09 75.4 5.6 48 411-464 192-240 (384)
203 4eqs_A Coenzyme A disulfide re 97.2 0.00017 5.8E-09 77.9 4.4 37 140-176 1-39 (437)
204 1kdg_A CDH, cellobiose dehydro 97.2 0.00023 7.8E-09 79.2 5.4 38 137-174 5-42 (546)
205 4g6h_A Rotenone-insensitive NA 97.2 0.00018 6.1E-09 79.1 4.3 39 135-173 38-76 (502)
206 3hyw_A Sulfide-quinone reducta 97.2 0.00023 8E-09 76.6 4.8 35 139-173 2-38 (430)
207 3sx6_A Sulfide-quinone reducta 97.1 0.00026 8.9E-09 76.4 4.5 36 139-174 4-42 (437)
208 3t37_A Probable dehydrogenase; 96.9 0.00047 1.6E-08 76.2 4.3 37 137-173 15-52 (526)
209 1ju2_A HydroxynitrIle lyase; f 96.8 0.00043 1.5E-08 76.7 3.3 38 138-176 25-62 (536)
210 1n4w_A CHOD, cholesterol oxida 96.7 0.00088 3E-08 73.6 4.7 37 139-175 5-41 (504)
211 3q9t_A Choline dehydrogenase a 96.6 0.001 3.6E-08 74.0 4.4 36 138-173 5-41 (577)
212 1coy_A Cholesterol oxidase; ox 96.6 0.0016 5.4E-08 71.6 5.3 38 137-174 9-46 (507)
213 3qvp_A Glucose oxidase; oxidor 96.3 0.0019 6.4E-08 72.0 4.1 35 138-172 18-53 (583)
214 4b63_A L-ornithine N5 monooxyg 96.3 0.00085 2.9E-08 73.7 1.2 40 138-177 38-77 (501)
215 3fim_B ARYL-alcohol oxidase; A 96.2 0.0019 6.4E-08 71.8 3.4 37 139-175 2-39 (566)
216 2jbv_A Choline oxidase; alcoho 96.2 0.0025 8.7E-08 70.6 4.3 39 138-176 12-51 (546)
217 1gpe_A Protein (glucose oxidas 96.2 0.0029 9.8E-08 70.8 4.3 37 138-174 23-60 (587)
218 3fwz_A Inner membrane protein 95.8 0.011 3.7E-07 52.6 5.9 39 135-173 3-41 (140)
219 4gcm_A TRXR, thioredoxin reduc 95.8 0.0075 2.6E-07 61.4 5.1 36 139-174 145-180 (312)
220 2g1u_A Hypothetical protein TM 95.7 0.011 3.8E-07 53.6 5.3 37 137-173 17-53 (155)
221 1nhp_A NADH peroxidase; oxidor 95.7 0.011 3.6E-07 63.8 6.0 40 138-177 148-187 (447)
222 3klj_A NAD(FAD)-dependent dehy 95.6 0.0098 3.4E-07 62.8 5.2 39 139-177 146-184 (385)
223 3lk7_A UDP-N-acetylmuramoylala 95.3 0.036 1.2E-06 59.7 8.6 35 138-172 8-42 (451)
224 1lvl_A Dihydrolipoamide dehydr 95.2 0.015 5.2E-07 62.8 5.3 39 138-176 170-208 (458)
225 2v3a_A Rubredoxin reductase; a 95.1 0.021 7.2E-07 60.1 6.0 39 139-177 145-183 (384)
226 1lss_A TRK system potassium up 95.1 0.02 7E-07 50.3 4.9 34 139-172 4-37 (140)
227 2eq6_A Pyruvate dehydrogenase 95.1 0.02 7E-07 61.9 5.8 38 139-176 169-206 (464)
228 2yqu_A 2-oxoglutarate dehydrog 95.0 0.022 7.5E-07 61.4 5.9 37 139-175 167-203 (455)
229 2x5o_A UDP-N-acetylmuramoylala 95.0 0.018 6E-07 62.0 5.0 39 138-176 4-42 (439)
230 1xhc_A NADH oxidase /nitrite r 95.0 0.022 7.4E-07 59.7 5.5 37 140-176 144-180 (367)
231 4a5l_A Thioredoxin reductase; 94.9 0.02 7E-07 58.0 5.0 35 138-172 151-185 (314)
232 1ebd_A E3BD, dihydrolipoamide 94.9 0.023 8E-07 61.2 5.7 37 139-175 170-206 (455)
233 1v59_A Dihydrolipoamide dehydr 94.9 0.025 8.5E-07 61.4 5.8 38 139-176 183-220 (478)
234 3llv_A Exopolyphosphatase-rela 94.9 0.028 9.5E-07 49.8 5.1 34 139-172 6-39 (141)
235 2gqw_A Ferredoxin reductase; f 94.8 0.028 9.7E-07 59.7 5.9 38 139-176 145-182 (408)
236 3c85_A Putative glutathione-re 94.7 0.028 9.5E-07 52.3 5.0 35 138-172 38-73 (183)
237 1ges_A Glutathione reductase; 94.6 0.034 1.2E-06 59.9 5.9 37 139-175 167-203 (450)
238 3ic5_A Putative saccharopine d 94.5 0.029 9.8E-07 47.6 4.3 34 139-172 5-39 (118)
239 1id1_A Putative potassium chan 94.5 0.043 1.5E-06 49.4 5.4 34 139-172 3-36 (153)
240 2r9z_A Glutathione amide reduc 94.3 0.042 1.4E-06 59.4 5.9 37 139-175 166-202 (463)
241 3cgb_A Pyridine nucleotide-dis 94.3 0.03 1E-06 60.8 4.7 39 138-176 185-223 (480)
242 1q1r_A Putidaredoxin reductase 94.3 0.047 1.6E-06 58.4 6.1 37 139-175 149-185 (431)
243 2bc0_A NADH oxidase; flavoprot 94.2 0.042 1.4E-06 59.9 5.7 39 138-176 193-231 (490)
244 3ic9_A Dihydrolipoamide dehydr 94.2 0.046 1.6E-06 59.6 5.9 40 138-177 173-212 (492)
245 1zmd_A Dihydrolipoyl dehydroge 94.0 0.05 1.7E-06 59.0 5.8 38 139-176 178-215 (474)
246 2hmt_A YUAA protein; RCK, KTN, 94.0 0.045 1.5E-06 48.2 4.6 34 139-172 6-39 (144)
247 1kyq_A Met8P, siroheme biosynt 94.0 0.11 3.9E-06 51.5 7.8 35 138-172 12-46 (274)
248 3ef6_A Toluene 1,2-dioxygenase 94.0 0.054 1.9E-06 57.5 5.8 38 138-175 142-179 (410)
249 3kd9_A Coenzyme A disulfide re 93.9 0.055 1.9E-06 58.1 5.9 40 138-177 147-186 (449)
250 1ojt_A Surface protein; redox- 93.9 0.043 1.5E-06 59.6 5.0 38 139-176 185-222 (482)
251 2a8x_A Dihydrolipoyl dehydroge 93.8 0.055 1.9E-06 58.4 5.7 38 139-176 171-208 (464)
252 4dio_A NAD(P) transhydrogenase 93.8 0.057 1.9E-06 56.7 5.5 36 138-173 189-224 (405)
253 3d1c_A Flavin-containing putat 93.8 0.05 1.7E-06 56.4 5.1 38 138-175 165-202 (369)
254 2q0l_A TRXR, thioredoxin reduc 93.7 0.06 2E-06 54.4 5.3 37 138-174 142-178 (311)
255 2hqm_A GR, grase, glutathione 93.6 0.069 2.4E-06 57.9 5.9 38 138-175 184-221 (479)
256 4eqs_A Coenzyme A disulfide re 93.5 0.057 2E-06 57.9 4.9 38 139-176 147-184 (437)
257 3ado_A Lambda-crystallin; L-gu 93.4 0.058 2E-06 54.9 4.6 35 138-172 5-39 (319)
258 1onf_A GR, grase, glutathione 93.4 0.066 2.3E-06 58.5 5.3 38 139-176 176-213 (500)
259 1fl2_A Alkyl hydroperoxide red 93.4 0.065 2.2E-06 54.1 5.0 37 138-174 143-179 (310)
260 1dxl_A Dihydrolipoamide dehydr 93.4 0.05 1.7E-06 58.8 4.3 39 138-176 176-214 (470)
261 3p2y_A Alanine dehydrogenase/p 93.4 0.061 2.1E-06 56.0 4.7 35 138-172 183-217 (381)
262 3fg2_P Putative rubredoxin red 93.2 0.086 2.9E-06 55.7 5.8 37 139-175 142-178 (404)
263 3lxd_A FAD-dependent pyridine 93.2 0.085 2.9E-06 56.0 5.8 37 139-175 152-188 (415)
264 3dfz_A SIRC, precorrin-2 dehyd 93.1 0.084 2.9E-06 50.8 5.0 35 137-171 29-63 (223)
265 1zk7_A HGII, reductase, mercur 93.1 0.081 2.8E-06 57.2 5.5 38 139-176 176-213 (467)
266 2qae_A Lipoamide, dihydrolipoy 93.1 0.086 2.9E-06 56.9 5.7 39 138-176 173-211 (468)
267 1vdc_A NTR, NADPH dependent th 93.1 0.076 2.6E-06 54.2 5.0 37 138-174 158-194 (333)
268 2xve_A Flavin-containing monoo 93.0 0.081 2.8E-06 57.2 5.3 39 138-176 196-234 (464)
269 2a87_A TRXR, TR, thioredoxin r 92.9 0.085 2.9E-06 54.0 5.1 37 138-174 154-190 (335)
270 3urh_A Dihydrolipoyl dehydroge 92.9 0.095 3.3E-06 57.0 5.7 39 138-176 197-235 (491)
271 2cdu_A NADPH oxidase; flavoenz 92.9 0.084 2.9E-06 56.8 5.1 37 139-175 149-185 (452)
272 1trb_A Thioredoxin reductase; 92.9 0.087 3E-06 53.3 5.0 37 138-174 144-180 (320)
273 3ntd_A FAD-dependent pyridine 92.9 0.093 3.2E-06 58.1 5.6 38 139-176 151-188 (565)
274 2q7v_A Thioredoxin reductase; 92.8 0.091 3.1E-06 53.5 5.1 37 138-174 151-187 (325)
275 3l8k_A Dihydrolipoyl dehydroge 92.8 0.12 4.1E-06 55.8 6.3 40 138-177 171-210 (466)
276 3gwf_A Cyclohexanone monooxyge 92.8 0.075 2.6E-06 58.6 4.7 37 137-173 176-212 (540)
277 3dk9_A Grase, GR, glutathione 92.7 0.1 3.4E-06 56.6 5.6 37 139-175 187-223 (478)
278 1x13_A NAD(P) transhydrogenase 92.6 0.1 3.6E-06 55.1 5.3 36 138-173 171-206 (401)
279 2zbw_A Thioredoxin reductase; 92.6 0.096 3.3E-06 53.5 4.9 37 138-174 151-187 (335)
280 3eag_A UDP-N-acetylmuramate:L- 92.6 0.1 3.4E-06 53.6 5.0 35 139-173 4-39 (326)
281 3oc4_A Oxidoreductase, pyridin 92.5 0.12 4.1E-06 55.6 5.8 39 138-176 146-184 (452)
282 2vdc_G Glutamate synthase [NAD 92.5 0.12 4.2E-06 55.5 5.8 38 137-174 262-300 (456)
283 3uox_A Otemo; baeyer-villiger 92.5 0.081 2.8E-06 58.4 4.4 37 137-173 183-219 (545)
284 3itj_A Thioredoxin reductase 1 92.5 0.11 3.6E-06 53.0 5.0 37 138-174 172-208 (338)
285 1l7d_A Nicotinamide nucleotide 92.4 0.13 4.3E-06 54.1 5.7 36 138-173 171-206 (384)
286 4e12_A Diketoreductase; oxidor 92.4 0.11 3.8E-06 52.0 5.0 35 139-173 4-38 (283)
287 3l4b_C TRKA K+ channel protien 92.4 0.095 3.2E-06 50.2 4.3 34 140-173 1-34 (218)
288 2gv8_A Monooxygenase; FMO, FAD 92.3 0.11 3.8E-06 55.7 5.2 37 138-174 211-248 (447)
289 4ap3_A Steroid monooxygenase; 92.3 0.084 2.9E-06 58.3 4.2 36 138-173 190-225 (549)
290 3cty_A Thioredoxin reductase; 92.1 0.11 3.7E-06 52.7 4.6 36 139-174 155-190 (319)
291 1f0y_A HCDH, L-3-hydroxyacyl-C 92.1 0.13 4.5E-06 52.0 5.1 34 139-172 15-48 (302)
292 1pzg_A LDH, lactate dehydrogen 92.0 0.16 5.5E-06 52.1 5.7 35 138-172 8-43 (331)
293 3lad_A Dihydrolipoamide dehydr 92.0 0.15 5E-06 55.2 5.7 38 138-175 179-216 (476)
294 3i83_A 2-dehydropantoate 2-red 91.9 0.14 4.9E-06 52.2 5.2 33 140-172 3-35 (320)
295 2raf_A Putative dinucleotide-b 91.9 0.16 5.6E-06 48.3 5.3 36 138-173 18-53 (209)
296 3ics_A Coenzyme A-disulfide re 91.9 0.16 5.5E-06 56.6 6.0 39 139-177 187-225 (588)
297 3doj_A AT3G25530, dehydrogenas 91.8 0.16 5.5E-06 51.6 5.5 38 136-173 18-55 (310)
298 2wpf_A Trypanothione reductase 91.8 0.13 4.5E-06 56.0 5.1 38 139-176 191-231 (495)
299 3s5w_A L-ornithine 5-monooxyge 91.8 0.097 3.3E-06 56.3 4.0 37 138-174 226-264 (463)
300 3ab1_A Ferredoxin--NADP reduct 91.7 0.13 4.6E-06 53.1 4.8 37 138-174 162-198 (360)
301 2dpo_A L-gulonate 3-dehydrogen 91.7 0.15 5.3E-06 51.9 5.1 34 139-172 6-39 (319)
302 1fec_A Trypanothione reductase 91.7 0.14 4.8E-06 55.7 5.1 38 139-176 187-227 (490)
303 1mo9_A ORF3; nucleotide bindin 91.7 0.16 5.3E-06 55.8 5.5 37 140-176 215-251 (523)
304 3oj0_A Glutr, glutamyl-tRNA re 91.6 0.073 2.5E-06 47.3 2.3 34 139-172 21-54 (144)
305 1pjc_A Protein (L-alanine dehy 91.5 0.17 5.6E-06 52.7 5.2 34 139-172 167-200 (361)
306 2a9f_A Putative malic enzyme ( 91.5 0.14 4.8E-06 53.2 4.5 35 138-172 187-222 (398)
307 1hyu_A AHPF, alkyl hydroperoxi 91.5 0.13 4.4E-06 56.5 4.5 37 138-174 354-390 (521)
308 1xdi_A RV3303C-LPDA; reductase 91.4 0.21 7.2E-06 54.4 6.2 40 138-177 181-220 (499)
309 2x8g_A Thioredoxin glutathione 91.4 0.16 5.4E-06 56.8 5.2 33 139-171 286-318 (598)
310 3hn2_A 2-dehydropantoate 2-red 91.3 0.15 5.2E-06 51.8 4.6 33 140-172 3-35 (312)
311 1ks9_A KPA reductase;, 2-dehyd 91.3 0.19 6.5E-06 50.1 5.3 33 141-173 2-34 (291)
312 3f8d_A Thioredoxin reductase ( 91.2 0.19 6.6E-06 50.6 5.3 38 138-175 153-190 (323)
313 1zcj_A Peroxisomal bifunctiona 91.2 0.35 1.2E-05 52.1 7.6 35 138-172 36-70 (463)
314 3dtt_A NADP oxidoreductase; st 91.1 0.2 6.9E-06 48.9 5.1 38 136-173 16-53 (245)
315 3r9u_A Thioredoxin reductase; 91.0 0.2 6.7E-06 50.4 5.1 37 138-174 146-182 (315)
316 1vl6_A Malate oxidoreductase; 91.0 0.17 5.8E-06 52.5 4.5 34 138-171 191-225 (388)
317 2ew2_A 2-dehydropantoate 2-red 90.9 0.2 7E-06 50.6 5.1 33 140-172 4-36 (316)
318 4b1b_A TRXR, thioredoxin reduc 90.9 0.21 7.3E-06 54.9 5.6 37 139-175 223-259 (542)
319 3iwa_A FAD-dependent pyridine 90.8 0.2 6.8E-06 54.1 5.2 39 138-176 158-197 (472)
320 1lld_A L-lactate dehydrogenase 90.7 0.22 7.6E-06 50.6 5.2 34 139-172 7-42 (319)
321 3k6j_A Protein F01G10.3, confi 90.7 0.26 8.8E-06 52.8 5.8 36 138-173 53-88 (460)
322 1zej_A HBD-9, 3-hydroxyacyl-CO 90.7 0.22 7.6E-06 50.0 5.1 34 138-172 11-44 (293)
323 2eez_A Alanine dehydrogenase; 90.7 0.22 7.5E-06 52.0 5.2 35 138-172 165-199 (369)
324 3dgz_A Thioredoxin reductase 2 90.6 0.28 9.4E-06 53.2 6.1 34 139-172 185-218 (488)
325 1nyt_A Shikimate 5-dehydrogena 90.6 0.25 8.5E-06 49.1 5.3 34 138-171 118-151 (271)
326 3qfa_A Thioredoxin reductase 1 90.6 0.27 9.2E-06 53.9 6.0 33 139-171 210-242 (519)
327 2vhw_A Alanine dehydrogenase; 90.5 0.23 8E-06 51.9 5.2 36 137-172 166-201 (377)
328 3gg2_A Sugar dehydrogenase, UD 90.5 0.23 8E-06 53.2 5.2 33 140-172 3-35 (450)
329 2hjr_A Malate dehydrogenase; m 90.4 0.28 9.4E-06 50.3 5.6 34 139-172 14-48 (328)
330 2y0c_A BCEC, UDP-glucose dehyd 90.4 0.23 7.9E-06 53.7 5.2 35 138-172 7-41 (478)
331 2qrj_A Saccharopine dehydrogen 90.4 0.19 6.6E-06 52.4 4.3 40 138-177 213-257 (394)
332 4dna_A Probable glutathione re 90.3 0.28 9.6E-06 52.8 5.9 38 138-175 169-206 (463)
333 1cjc_A Protein (adrenodoxin re 90.2 0.23 7.8E-06 53.5 5.0 37 138-174 144-201 (460)
334 3hwr_A 2-dehydropantoate 2-red 90.2 0.25 8.4E-06 50.4 5.0 34 138-172 18-51 (318)
335 2ewd_A Lactate dehydrogenase,; 90.2 0.26 8.9E-06 50.2 5.2 34 139-172 4-38 (317)
336 3ghy_A Ketopantoate reductase 90.2 0.27 9.3E-06 50.5 5.3 33 139-171 3-35 (335)
337 3o0h_A Glutathione reductase; 90.2 0.29 1E-05 53.0 5.9 38 138-175 190-227 (484)
338 3lzw_A Ferredoxin--NADP reduct 90.1 0.25 8.7E-06 49.9 5.1 37 138-174 153-189 (332)
339 3phh_A Shikimate dehydrogenase 90.1 0.31 1.1E-05 48.2 5.4 35 139-173 118-152 (269)
340 3pef_A 6-phosphogluconate dehy 90.1 0.27 9.4E-06 49.1 5.1 34 140-173 2-35 (287)
341 3g0o_A 3-hydroxyisobutyrate de 89.9 0.3 1E-05 49.3 5.2 34 139-172 7-40 (303)
342 4dll_A 2-hydroxy-3-oxopropiona 89.8 0.28 9.5E-06 50.1 5.0 35 138-172 30-64 (320)
343 3g79_A NDP-N-acetyl-D-galactos 89.8 0.28 9.6E-06 52.9 5.2 35 139-173 18-54 (478)
344 3fbs_A Oxidoreductase; structu 89.7 0.23 7.9E-06 49.4 4.2 37 614-652 258-294 (297)
345 3g17_A Similar to 2-dehydropan 89.7 0.21 7.1E-06 50.3 3.9 33 140-172 3-35 (294)
346 3qha_A Putative oxidoreductase 89.6 0.26 8.7E-06 49.7 4.5 36 139-174 15-50 (296)
347 2vns_A Metalloreductase steap3 89.5 0.33 1.1E-05 46.3 4.9 35 138-172 27-61 (215)
348 3l9w_A Glutathione-regulated p 89.5 0.31 1E-05 51.7 5.1 36 138-173 3-38 (413)
349 3d4o_A Dipicolinate synthase s 89.4 0.33 1.1E-05 48.8 5.1 35 138-172 154-188 (293)
350 2egg_A AROE, shikimate 5-dehyd 89.4 0.33 1.1E-05 49.0 5.1 35 138-172 140-175 (297)
351 2rir_A Dipicolinate synthase, 89.4 0.32 1.1E-05 49.0 5.1 36 137-172 155-190 (300)
352 1z82_A Glycerol-3-phosphate de 89.3 0.33 1.1E-05 49.7 5.2 34 138-171 13-46 (335)
353 3k96_A Glycerol-3-phosphate de 89.3 0.34 1.1E-05 50.3 5.2 35 138-172 28-62 (356)
354 4a7p_A UDP-glucose dehydrogena 89.2 0.36 1.2E-05 51.6 5.5 35 139-173 8-42 (446)
355 2wtb_A MFP2, fatty acid multif 89.2 0.79 2.7E-05 52.2 8.6 63 108-172 282-345 (725)
356 1m6i_A Programmed cell death p 89.2 0.32 1.1E-05 52.9 5.2 36 139-174 180-219 (493)
357 1bg6_A N-(1-D-carboxylethyl)-L 89.2 0.35 1.2E-05 49.9 5.2 33 140-172 5-37 (359)
358 3dgh_A TRXR-1, thioredoxin red 89.2 0.42 1.4E-05 51.7 6.1 33 139-171 187-219 (483)
359 1t2d_A LDH-P, L-lactate dehydr 89.1 0.43 1.5E-05 48.7 5.7 34 139-172 4-38 (322)
360 1p77_A Shikimate 5-dehydrogena 89.1 0.27 9.1E-06 48.9 4.1 35 138-172 118-152 (272)
361 4g65_A TRK system potassium up 88.8 0.18 6.1E-06 54.4 2.8 66 138-213 2-67 (461)
362 3vtf_A UDP-glucose 6-dehydroge 88.8 0.36 1.2E-05 51.3 5.0 36 137-172 19-54 (444)
363 2v6b_A L-LDH, L-lactate dehydr 88.8 0.38 1.3E-05 48.7 5.0 33 140-172 1-35 (304)
364 3gvp_A Adenosylhomocysteinase 88.7 0.36 1.2E-05 50.9 4.9 36 137-172 218-253 (435)
365 3ego_A Probable 2-dehydropanto 88.7 0.39 1.3E-05 48.6 5.1 33 139-172 2-34 (307)
366 3ond_A Adenosylhomocysteinase; 88.7 0.41 1.4E-05 51.4 5.3 35 138-172 264-298 (488)
367 4ffl_A PYLC; amino acid, biosy 88.6 0.39 1.3E-05 49.8 5.2 34 140-173 2-35 (363)
368 1pjq_A CYSG, siroheme synthase 88.5 0.33 1.1E-05 52.2 4.6 34 138-171 11-44 (457)
369 3pdu_A 3-hydroxyisobutyrate de 88.4 0.3 1E-05 48.9 4.0 34 140-173 2-35 (287)
370 3gvi_A Malate dehydrogenase; N 88.4 0.5 1.7E-05 48.2 5.6 35 138-172 6-41 (324)
371 1mv8_A GMD, GDP-mannose 6-dehy 88.2 0.35 1.2E-05 51.6 4.6 32 141-172 2-33 (436)
372 3mog_A Probable 3-hydroxybutyr 88.2 0.42 1.4E-05 51.7 5.2 34 139-172 5-38 (483)
373 3l6d_A Putative oxidoreductase 88.2 0.54 1.8E-05 47.5 5.7 36 138-173 8-43 (306)
374 2gag_A Heterotetrameric sarcos 88.2 0.25 8.7E-06 58.4 3.8 37 139-175 284-320 (965)
375 1o94_A Tmadh, trimethylamine d 88.2 0.39 1.3E-05 55.0 5.2 38 138-176 527-566 (729)
376 4a9w_A Monooxygenase; baeyer-v 88.0 0.39 1.3E-05 49.0 4.6 34 138-172 162-195 (357)
377 2h78_A Hibadh, 3-hydroxyisobut 88.0 0.41 1.4E-05 48.2 4.7 34 139-172 3-36 (302)
378 3don_A Shikimate dehydrogenase 87.9 0.34 1.2E-05 48.2 4.0 36 138-173 116-152 (277)
379 1jw9_B Molybdopterin biosynthe 87.9 0.41 1.4E-05 46.9 4.5 34 139-172 31-65 (249)
380 1leh_A Leucine dehydrogenase; 87.9 0.51 1.7E-05 48.9 5.3 35 137-171 171-205 (364)
381 1ur5_A Malate dehydrogenase; o 87.8 0.54 1.9E-05 47.6 5.5 33 140-172 3-36 (309)
382 4huj_A Uncharacterized protein 87.8 0.35 1.2E-05 46.3 3.8 35 139-173 23-58 (220)
383 1txg_A Glycerol-3-phosphate de 87.6 0.4 1.4E-05 49.0 4.4 30 141-170 2-31 (335)
384 3tl2_A Malate dehydrogenase; c 87.6 0.5 1.7E-05 48.0 5.0 33 139-171 8-41 (315)
385 4e21_A 6-phosphogluconate dehy 87.6 0.51 1.8E-05 48.9 5.2 35 138-172 21-55 (358)
386 3ldh_A Lactate dehydrogenase; 87.5 0.72 2.5E-05 47.0 6.1 35 138-172 20-56 (330)
387 3pid_A UDP-glucose 6-dehydroge 87.5 0.48 1.7E-05 50.2 5.0 35 138-173 35-69 (432)
388 3zwc_A Peroxisomal bifunctiona 87.4 1.1 3.6E-05 51.1 8.1 37 137-173 314-350 (742)
389 2hk9_A Shikimate dehydrogenase 87.4 0.39 1.3E-05 47.8 4.0 34 139-172 129-162 (275)
390 3e8x_A Putative NAD-dependent 87.4 0.53 1.8E-05 45.2 4.9 37 137-173 19-56 (236)
391 2uyy_A N-PAC protein; long-cha 87.3 0.65 2.2E-05 47.0 5.7 35 139-173 30-64 (316)
392 1jay_A Coenzyme F420H2:NADP+ o 87.2 0.51 1.7E-05 44.6 4.6 32 141-172 2-34 (212)
393 4aj2_A L-lactate dehydrogenase 87.1 0.64 2.2E-05 47.5 5.5 36 136-171 16-53 (331)
394 3pwz_A Shikimate dehydrogenase 87.1 0.63 2.1E-05 46.2 5.3 35 138-172 119-154 (272)
395 4ezb_A Uncharacterized conserv 87.1 0.46 1.6E-05 48.3 4.5 35 138-172 23-58 (317)
396 1guz_A Malate dehydrogenase; o 87.1 0.6 2E-05 47.3 5.3 32 141-172 2-35 (310)
397 1lqt_A FPRA; NADP+ derivative, 87.0 0.49 1.7E-05 50.8 4.9 38 138-175 146-204 (456)
398 2i6t_A Ubiquitin-conjugating e 87.0 0.5 1.7E-05 47.7 4.6 35 139-173 14-50 (303)
399 3tnl_A Shikimate dehydrogenase 87.0 0.57 2E-05 47.5 5.0 34 138-171 153-187 (315)
400 3ce6_A Adenosylhomocysteinase; 87.0 0.58 2E-05 50.5 5.3 36 137-172 272-307 (494)
401 1edz_A 5,10-methylenetetrahydr 86.9 0.79 2.7E-05 46.4 5.9 35 137-171 175-210 (320)
402 3jyo_A Quinate/shikimate dehyd 86.9 0.64 2.2E-05 46.4 5.3 35 138-172 126-161 (283)
403 1y6j_A L-lactate dehydrogenase 86.9 0.62 2.1E-05 47.4 5.3 34 139-172 7-42 (318)
404 1gte_A Dihydropyrimidine dehyd 86.7 0.51 1.8E-05 56.2 5.2 35 139-173 332-367 (1025)
405 4hv4_A UDP-N-acetylmuramate--L 86.7 0.43 1.5E-05 51.9 4.2 35 138-172 21-56 (494)
406 1wdk_A Fatty oxidation complex 86.6 0.68 2.3E-05 52.7 6.0 62 108-172 286-347 (715)
407 3fbt_A Chorismate mutase and s 86.5 0.56 1.9E-05 46.7 4.6 35 138-172 121-156 (282)
408 3h9u_A Adenosylhomocysteinase; 86.5 0.58 2E-05 49.4 4.9 36 137-172 209-244 (436)
409 2aef_A Calcium-gated potassium 86.5 0.3 1E-05 47.2 2.5 35 138-173 8-42 (234)
410 2pv7_A T-protein [includes: ch 86.3 0.63 2.2E-05 46.8 5.0 35 139-173 21-56 (298)
411 3ggo_A Prephenate dehydrogenas 86.3 0.78 2.7E-05 46.6 5.7 34 139-172 33-68 (314)
412 3qsg_A NAD-binding phosphogluc 86.2 0.54 1.8E-05 47.7 4.4 34 138-171 23-57 (312)
413 1dlj_A UDP-glucose dehydrogena 86.2 0.52 1.8E-05 49.7 4.4 31 141-172 2-32 (402)
414 3pqe_A L-LDH, L-lactate dehydr 86.2 0.66 2.2E-05 47.3 5.0 35 138-172 4-40 (326)
415 4gbj_A 6-phosphogluconate dehy 86.1 0.48 1.6E-05 47.7 4.0 36 138-173 4-39 (297)
416 1gpj_A Glutamyl-tRNA reductase 86.1 0.59 2E-05 49.3 4.8 35 138-172 166-201 (404)
417 3k30_A Histamine dehydrogenase 86.0 0.67 2.3E-05 52.6 5.6 39 138-176 522-562 (690)
418 2f1k_A Prephenate dehydrogenas 86.0 0.7 2.4E-05 45.8 5.1 32 141-172 2-33 (279)
419 3o8q_A Shikimate 5-dehydrogena 86.0 0.68 2.3E-05 46.2 4.9 35 138-172 125-160 (281)
420 3u62_A Shikimate dehydrogenase 86.0 0.74 2.5E-05 45.2 5.1 34 138-172 108-142 (253)
421 3gpi_A NAD-dependent epimerase 85.9 0.81 2.8E-05 45.3 5.5 35 139-173 3-37 (286)
422 1nvt_A Shikimate 5'-dehydrogen 85.8 0.59 2E-05 46.7 4.4 34 138-172 127-160 (287)
423 3p7m_A Malate dehydrogenase; p 85.7 0.86 3E-05 46.4 5.6 34 139-172 5-39 (321)
424 1w4x_A Phenylacetone monooxyge 85.7 0.53 1.8E-05 51.8 4.4 35 138-172 185-219 (542)
425 1a5z_A L-lactate dehydrogenase 85.7 0.6 2.1E-05 47.5 4.5 33 140-172 1-35 (319)
426 3ius_A Uncharacterized conserv 85.7 0.65 2.2E-05 46.0 4.7 34 139-172 5-38 (286)
427 2g5c_A Prephenate dehydrogenas 85.7 0.75 2.6E-05 45.7 5.1 33 140-172 2-36 (281)
428 3n58_A Adenosylhomocysteinase; 85.6 0.68 2.3E-05 48.9 4.8 36 137-172 245-280 (464)
429 3t4e_A Quinate/shikimate dehyd 85.6 0.76 2.6E-05 46.5 5.1 34 138-171 147-181 (312)
430 1evy_A Glycerol-3-phosphate de 85.5 0.44 1.5E-05 49.5 3.4 32 141-172 17-48 (366)
431 3cky_A 2-hydroxymethyl glutara 85.4 0.7 2.4E-05 46.3 4.8 34 139-172 4-37 (301)
432 3vku_A L-LDH, L-lactate dehydr 85.3 0.75 2.6E-05 46.9 4.9 35 137-171 7-43 (326)
433 2gf2_A Hibadh, 3-hydroxyisobut 85.3 0.71 2.4E-05 46.2 4.7 32 141-172 2-33 (296)
434 1yqg_A Pyrroline-5-carboxylate 85.3 0.67 2.3E-05 45.5 4.5 32 141-172 2-34 (263)
435 2p4q_A 6-phosphogluconate dehy 85.1 0.85 2.9E-05 49.5 5.5 35 138-172 9-43 (497)
436 2d5c_A AROE, shikimate 5-dehyd 85.1 0.87 3E-05 44.8 5.2 32 141-172 118-149 (263)
437 2zyd_A 6-phosphogluconate dehy 85.0 0.7 2.4E-05 49.9 4.8 35 138-172 14-48 (480)
438 3c24_A Putative oxidoreductase 84.9 0.81 2.8E-05 45.6 4.9 33 140-172 12-45 (286)
439 1vpd_A Tartronate semialdehyde 84.9 0.73 2.5E-05 46.2 4.6 33 140-172 6-38 (299)
440 3gt0_A Pyrroline-5-carboxylate 84.9 1 3.4E-05 43.8 5.5 33 140-172 3-39 (247)
441 2dbq_A Glyoxylate reductase; D 84.8 0.96 3.3E-05 46.3 5.5 37 137-173 148-184 (334)
442 1lu9_A Methylene tetrahydromet 84.7 0.88 3E-05 45.4 5.1 34 138-171 118-152 (287)
443 1hyh_A L-hicdh, L-2-hydroxyiso 84.7 0.7 2.4E-05 46.7 4.4 33 140-172 2-36 (309)
444 2qyt_A 2-dehydropantoate 2-red 84.7 0.54 1.9E-05 47.5 3.6 31 140-170 9-45 (317)
445 1c1d_A L-phenylalanine dehydro 84.6 0.95 3.3E-05 46.6 5.3 35 137-171 173-207 (355)
446 1npy_A Hypothetical shikimate 84.6 0.86 2.9E-05 45.2 4.9 33 139-171 119-152 (271)
447 2cvz_A Dehydrogenase, 3-hydrox 84.6 0.71 2.4E-05 45.9 4.4 32 140-172 2-33 (289)
448 3ktd_A Prephenate dehydrogenas 84.5 1 3.4E-05 46.3 5.5 34 139-172 8-41 (341)
449 3ew7_A LMO0794 protein; Q8Y8U8 84.4 0.96 3.3E-05 42.6 5.0 33 140-172 1-34 (221)
450 1np3_A Ketol-acid reductoisome 84.2 0.99 3.4E-05 46.3 5.3 34 139-172 16-49 (338)
451 4gwg_A 6-phosphogluconate dehy 84.2 0.94 3.2E-05 48.8 5.3 34 139-172 4-37 (484)
452 3dfu_A Uncharacterized protein 84.1 0.36 1.2E-05 46.6 1.8 34 138-171 5-38 (232)
453 1x0v_A GPD-C, GPDH-C, glycerol 84.0 0.54 1.8E-05 48.5 3.2 34 140-173 9-49 (354)
454 2ahr_A Putative pyrroline carb 84.0 0.88 3E-05 44.5 4.6 34 139-172 3-36 (259)
455 2dvm_A Malic enzyme, 439AA lon 83.9 0.78 2.7E-05 48.6 4.4 32 138-169 185-219 (439)
456 2o3j_A UDP-glucose 6-dehydroge 83.8 0.87 3E-05 49.2 4.9 33 139-171 9-43 (481)
457 2rcy_A Pyrroline carboxylate r 83.7 0.91 3.1E-05 44.4 4.7 34 140-173 5-42 (262)
458 1oju_A MDH, malate dehydrogena 83.7 0.85 2.9E-05 45.8 4.4 33 140-172 1-35 (294)
459 1yj8_A Glycerol-3-phosphate de 83.6 0.65 2.2E-05 48.4 3.7 34 140-173 22-62 (375)
460 4id9_A Short-chain dehydrogena 83.6 0.94 3.2E-05 46.2 4.9 38 136-173 16-54 (347)
461 2gcg_A Glyoxylate reductase/hy 83.6 1 3.4E-05 46.1 5.0 36 137-172 153-188 (330)
462 3two_A Mannitol dehydrogenase; 83.4 1.3 4.5E-05 45.4 5.9 37 137-173 175-211 (348)
463 1yb4_A Tartronic semialdehyde 83.4 0.66 2.2E-05 46.4 3.5 32 140-172 4-35 (295)
464 3ba1_A HPPR, hydroxyphenylpyru 83.4 1.2 4E-05 45.7 5.4 37 137-173 162-198 (333)
465 3ngx_A Bifunctional protein fo 83.3 1.1 3.7E-05 44.2 4.9 35 137-171 148-183 (276)
466 3q2o_A Phosphoribosylaminoimid 83.2 1.1 3.8E-05 46.8 5.3 37 137-173 12-48 (389)
467 3tri_A Pyrroline-5-carboxylate 83.2 1.3 4.5E-05 44.0 5.6 35 139-173 3-40 (280)
468 2q3e_A UDP-glucose 6-dehydroge 83.2 0.83 2.8E-05 49.2 4.4 33 140-172 6-40 (467)
469 1hdo_A Biliverdin IX beta redu 83.2 1.1 3.8E-05 41.5 4.8 33 140-172 4-37 (206)
470 4a26_A Putative C-1-tetrahydro 83.1 1.2 4E-05 44.5 5.1 35 137-171 163-198 (300)
471 1ldn_A L-lactate dehydrogenase 83.1 1.1 3.9E-05 45.4 5.2 35 138-172 5-41 (316)
472 3ojo_A CAP5O; rossmann fold, c 83.1 0.93 3.2E-05 48.1 4.6 36 138-173 10-45 (431)
473 2izz_A Pyrroline-5-carboxylate 83.0 1.1 3.9E-05 45.4 5.2 34 139-172 22-59 (322)
474 2pgd_A 6-phosphogluconate dehy 83.0 1 3.6E-05 48.6 5.1 33 140-172 3-35 (482)
475 3h2s_A Putative NADH-flavin re 82.8 1.2 4E-05 42.2 4.9 32 141-172 2-34 (224)
476 3nep_X Malate dehydrogenase; h 82.6 1 3.5E-05 45.6 4.6 33 140-172 1-35 (314)
477 3d1l_A Putative NADP oxidoredu 82.5 0.92 3.2E-05 44.6 4.2 34 139-172 10-44 (266)
478 4g6h_A Rotenone-insensitive NA 82.4 0.85 2.9E-05 49.6 4.2 36 140-175 218-267 (502)
479 2d0i_A Dehydrogenase; structur 82.4 1.5 5.2E-05 44.8 5.8 38 136-173 143-180 (333)
480 1i36_A Conserved hypothetical 82.2 1 3.5E-05 44.1 4.3 30 141-170 2-31 (264)
481 1zud_1 Adenylyltransferase THI 82.1 1.2 4.1E-05 43.6 4.7 34 138-171 27-61 (251)
482 1a4i_A Methylenetetrahydrofola 82.0 1.4 4.8E-05 44.0 5.1 35 137-171 163-198 (301)
483 3rui_A Ubiquitin-like modifier 81.9 1.4 4.7E-05 45.0 5.2 34 138-171 33-67 (340)
484 3fi9_A Malate dehydrogenase; s 81.9 1.7 5.9E-05 44.5 6.0 34 138-171 7-43 (343)
485 3vps_A TUNA, NAD-dependent epi 81.8 1.5 5.1E-05 43.9 5.5 36 138-173 6-42 (321)
486 3d0o_A L-LDH 1, L-lactate dehy 81.7 1.3 4.3E-05 45.0 4.9 34 138-171 5-40 (317)
487 1pgj_A 6PGDH, 6-PGDH, 6-phosph 81.4 1.2 4.1E-05 48.0 4.8 33 140-172 2-34 (478)
488 2x3n_A Probable FAD-dependent 81.3 1.6 5.5E-05 45.5 5.8 49 411-465 112-164 (399)
489 3c7a_A Octopine dehydrogenase; 81.3 0.9 3.1E-05 47.8 3.7 31 140-170 3-34 (404)
490 3h8v_A Ubiquitin-like modifier 81.2 1.1 3.8E-05 44.8 4.1 34 138-171 35-69 (292)
491 4b4o_A Epimerase family protei 81.2 1.6 5.3E-05 43.6 5.3 35 140-174 1-36 (298)
492 3hn7_A UDP-N-acetylmuramate-L- 81.2 3.7 0.00013 44.8 8.7 35 139-173 19-54 (524)
493 2f00_A UDP-N-acetylmuramate--L 81.1 1.4 4.6E-05 47.8 5.2 35 138-172 18-53 (491)
494 2ekl_A D-3-phosphoglycerate de 81.0 1.7 5.8E-05 44.0 5.5 38 136-173 139-176 (313)
495 4fk1_A Putative thioredoxin re 80.8 1.5 5.1E-05 43.8 5.1 36 139-174 146-182 (304)
496 3d64_A Adenosylhomocysteinase; 80.7 1.5 5E-05 47.3 5.1 36 137-172 275-310 (494)
497 1piw_A Hypothetical zinc-type 80.5 1.5 5.3E-05 45.2 5.2 37 137-173 178-214 (360)
498 2pzm_A Putative nucleotide sug 80.5 1.7 5.9E-05 44.0 5.5 37 136-172 17-54 (330)
499 1pqw_A Polyketide synthase; ro 80.5 1.2 4E-05 41.5 3.9 36 137-172 37-73 (198)
500 2yjz_A Metalloreductase steap4 81.6 0.33 1.1E-05 45.8 0.0 36 138-173 18-53 (201)
No 1
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=100.00 E-value=8.6e-85 Score=747.73 Aligned_cols=613 Identities=62% Similarity=1.105 Sum_probs=507.9
Q ss_pred ccHHHHHHHcCCCCCCCChhHhhhccccccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHHHhccccCCCCcchhhHHH
Q psy6038 33 EGLEGAAFQSRLPYDKMTTNEVQYFPDISNNPIHSHKTFLHIRNRILQMWLENPKVQLTLEFVMQKIESPFNSEVQLVSR 112 (661)
Q Consensus 33 ~~~~~~a~~~~l~~~~~~~~e~~~~p~~~~~~~~~~~~~l~irn~~~~~~~~np~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (661)
++|++||++||||||.|+++|..+|||++++++..++.||+|||+|+++|..||+.++|.++|..++..++..+|+.|+.
T Consensus 1 ~~~~~aa~~~~l~~~~l~~~E~~~~~~~~~~~~~~~~~yl~irn~~~~~w~~~~~~~~~~~~~~~~~~r~~~~~~~~i~~ 80 (662)
T 2z3y_A 1 SGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPYNSDTVLVHR 80 (662)
T ss_dssp CHHHHHHHHTTCCTTSCCHHHHHHCHHHHTSCHHHHHHHHHHHHHHHHHHHTCTTBCCCHHHHHHHSCTTGGGCHHHHHH
T ss_pred ChHHHHHHHcCCCCCCCCHHHHHHhHHHHcCchHHHHHHHHHHHHHHHHHHHCCCcccCHHHHHHhcCCCccCChHHHHH
Confidence 47999999999999999999999999999997778889999999999999999999999999999999888889999999
Q ss_pred HHHHHHHhhHHhcCCccccCCCCCCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCcccccccc
Q psy6038 113 LHCYLERHGYINFGIFQRITPIPVKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSNYVADLGA 192 (661)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~~~~d~G~ 192 (661)
+++|+.+++++|+|+++...+++..+.++|+|||||++||+||++|++.|++|+|+|+++++||++.+++..+..+|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~~~~~~G~ 160 (662)
T 2z3y_A 81 VHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGA 160 (662)
T ss_dssp HHHHHHHTTSSSCSSCBCSSCCCSSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEETTEEEESSC
T ss_pred HHHHHHHHHHHhcCCccccCCCcccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccccCchhhcCc
Confidence 99999999999998877654545567899999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCChhhHHHHhhChhhhhhcCCCcEEecCCCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCc
Q psy6038 193 MVVTGLGGNPINILARQINMELLKIGHQCPLYQSSAENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPL 272 (661)
Q Consensus 193 ~~i~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~ 272 (661)
+++++..++++..+.+++++++..+...+.++..+|. .++.+.+......++.++.+..++.+..++....+.+.
T Consensus 161 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~G~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 235 (662)
T 2z3y_A 161 MVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQ-----AVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPV 235 (662)
T ss_dssp CEECCSBTCHHHHHHHHHTCCEEECCSCCCEECTTSC-----BCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCEETTEEC
T ss_pred EEEeCCCCchHHHHHHHhCcchhcccccceEEeCCCc-----CCCcchhhhhhHHHHHHHHHHHHHHhcccccccCCCCC
Confidence 9999888899999999999988777767778888888 67766666778889999999988877665544444444
Q ss_pred hh------HHHHHH-----HHHHH-------HHH-------HHHHHHHhhhhhhhhcc---CCCCCchhHHHhhhhhhhh
Q psy6038 273 SL------VIELQE-----ELKPV-------LSR-------MNEILVQLDTLDQTLQN---VPIDNTTAVEFQKRSTRRD 324 (661)
Q Consensus 273 s~------~i~~~~-----~~~~~-------~~~-------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 324 (661)
++ ++...+ +..+. ... +.....++..+...+.. ...+.+...++..+....+
T Consensus 236 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~s~~~~~~~ 315 (662)
T 2z3y_A 236 SLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRD 315 (662)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCC--------CCTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhcchhhhHHHHhhhhhhhhhcccccccchhhhhhhhhhh
Confidence 43 111110 00000 001 11111111122222111 1112333456666665566
Q ss_pred HHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHHHHHHHhhhhhhcCCCCccccccCCCCCCCccccCCcee
Q psy6038 325 MNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQLLDWHFANLEFANATPLASLSLKHWDQDDDFEFTGSHLT 404 (661)
Q Consensus 325 ~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ll~~~~~~le~~~~~~l~~lsl~~~~~~~~~~~~g~~~~ 404 (661)
+...+++|+.+......+...+..+....+..+|+++.++++++|+++++++.++..+..+|+.+|+++..+.+.|.+++
T Consensus 316 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~~g~~~~ 395 (662)
T 2z3y_A 316 LTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLT 395 (662)
T ss_dssp HTTTHHHHHHHTHHHHHHHHHHHHHTTSCCCSCSSCHHHHHHHHHHHHHHHHHTTSCGGGBBTTTTTTTGGGCCBSCCEE
T ss_pred HHHHHhhhhhhhhhhhhHHHHHHHhhccCcccccccHHHHHHHHHHHHHHHHhcCCChhhcCHhhcCCCcccccCCceee
Confidence 66667778777666666777777787888888899999999999999999999999999999999998877788899999
Q ss_pred eccchhHHHHHHhccCceeeCceEEEEEecCCceEEEEeCCCCCCCCeEEEeCEEEEccChhhhhhcCCCCCccccCCCC
Q psy6038 405 VKKGYACVPTALAEGLDVHFNSSVTEIHYNSKGVTVKTVDPKTGQNETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPL 484 (661)
Q Consensus 405 v~gG~~~L~~aLa~~L~I~lnt~V~~I~~~~~gv~V~~~~~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~L 484 (661)
+++||++|+++|+++++|++|++|++|.+++++|.|++.+....+++++++||+||||+|+++|++. .+.|.|.|+|
T Consensus 396 ~~gG~~~l~~~La~~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l---~~~i~f~P~L 472 (662)
T 2z3y_A 396 VRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQ---PPAVQFVPPL 472 (662)
T ss_dssp ETTCTTHHHHHHTTTCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCS---SCSSEEESCC
T ss_pred ecCcHHHHHHHHHhcCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcc---cCceEEcCCC
Confidence 9999999999999999999999999999999999988765222234678999999999999999971 1247899999
Q ss_pred CHHHHHHHHHcCCccccEEEEEccccccccCCCceeeeccCCCCCCceEEEEecCCCcEEEEEeccchhhhhhccc----
Q psy6038 485 PDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGSTTASRGELFLFWNLYQAPVLLALVAGEAASILEDVS---- 560 (661)
Q Consensus 485 p~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~vL~~~~~g~~a~~~~~~~---- 560 (661)
|++|.+||++++||+++||+|.|+++||+.+...||.+.+....++.++.+|+.++.++|++|+.|..+..++.++
T Consensus 473 P~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~vL~~~~~G~~a~~~~~lsdee~ 552 (662)
T 2z3y_A 473 PEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVI 552 (662)
T ss_dssp CHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCSSSSEEEEEECTHHHHHHTTSCHHHH
T ss_pred CHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeCCCCCEEEEEeccHhHHHHHhCCHHHH
Confidence 9999999999999999999999999999987788998876666677788888887889999999999988776665
Q ss_pred ----------CCCCCCCCCCceEEEecCCCCCCCCcccCccCCCCCCcchhhhcCCCCC-------CCCCCcEEEecccc
Q psy6038 561 ----------IFPTNTVPQPKETVVTRWKADPFAKGSYSFVAVGASGSDYDTLGLPVKD-------DKDIPRLFFAGEHT 623 (661)
Q Consensus 561 ----------~fg~~~~~~p~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~la~p~~~-------~~~~~rl~FAGe~t 623 (661)
+||....++|..+.+++|.+|||++|||++++||+...+++.|++|+.. ..+.+|||||||||
T Consensus 553 ~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~t 632 (662)
T 2z3y_A 553 VGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHT 632 (662)
T ss_dssp HHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCCEEECSGGG
T ss_pred HHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCcEEEEeccc
Confidence 7887667899999999999999999999999999998899999999842 23458999999999
Q ss_pred cCcCCcchhHHHHHHHHHHHHHHHHhhcCC
Q psy6038 624 IRNYPATVHGAFLSGLKEGGHIVDQILGAN 653 (661)
Q Consensus 624 ~~~~~gtv~GA~~SG~raA~~i~~~~~g~~ 653 (661)
+..|+||||||++||+|||.+|++.+.|+|
T Consensus 633 s~~~~g~v~GAi~SG~raA~~i~~~~~g~~ 662 (662)
T 2z3y_A 633 IRNYPATVHGALLSGLREAGRIADQFLGAM 662 (662)
T ss_dssp CTTSTTSHHHHHHHHHHHHHHHHHHHTC--
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHHHccCCC
Confidence 999999999999999999999999999864
No 2
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=100.00 E-value=6.4e-83 Score=739.99 Aligned_cols=629 Identities=61% Similarity=1.089 Sum_probs=513.4
Q ss_pred cCCcccCCCcccHHHHHHHcCCCCCCCChhHhhhccccccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHHHhccccCC
Q psy6038 23 YDEDIEYHIPEGLEGAAFQSRLPYDKMTTNEVQYFPDISNNPIHSHKTFLHIRNRILQMWLENPKVQLTLEFVMQKIESP 102 (661)
Q Consensus 23 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~e~~~~p~~~~~~~~~~~~~l~irn~~~~~~~~np~~~~~~~~~~~~~~~~ 102 (661)
+++++.+.+|.+|++||++||||+|.|+..|+.+||++.++++..++.|++|||+|+++|..||...++.+.|..++...
T Consensus 162 ~~~~~~~~~~~~~~~aa~~~r~p~~~~~~~e~~~f~~~~~~~~~~~~~~~~~rn~i~~~w~~~P~~a~~~~~~~~~~~r~ 241 (852)
T 2xag_A 162 EENESEPEEPSGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAP 241 (852)
T ss_dssp ---------CCSHHHHHHTTTCCTTSCCHHHHHHCHHHHTSCHHHHHHHHHHHHHHHHHHHTCTTBCCCHHHHHHHCCTT
T ss_pred cccccCccchHHHHHHHHHhcCCCcccChHHHHHHHHHHHhhhhhcCeeeEeecchhHHHhcCCHHHhhHHHHHHhCCCc
Confidence 55566677899999999999999999999999999999999878889999999999999999999999999999999888
Q ss_pred CCcchhhHHHHHHHHHHhhHHhcCCccccCCCCCCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccC
Q psy6038 103 FNSEVQLVSRLHCYLERHGYINFGIFQRITPIPVKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFK 182 (661)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~ 182 (661)
+..+|+.|+++++|+.+++++|+|+++...+++....++|+|||||++||+||++|+++|++|+|||+++++||++.+++
T Consensus 242 ~~~~p~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~ 321 (852)
T 2xag_A 242 YNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFR 321 (852)
T ss_dssp TTSCHHHHHHHHHHHHHTTSSSCSSCBCSSCCCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEE
T ss_pred ccCCcHHHHHHHHHHHHHHHHhcCcccccCCcccCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeec
Confidence 88999999999999999999999887655444556778999999999999999999999999999999999999999999
Q ss_pred CCccccccccEEEeCCCCChhhHHHHhhChhhhhhcCCCcEEecCCCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhccc
Q psy6038 183 KSNYVADLGAMVVTGLGGNPINILARQINMELLKIGHQCPLYQSSAENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTL 262 (661)
Q Consensus 183 ~~~~~~d~G~~~i~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 262 (661)
..++++|+|++++++..++++..+.+++|+++..+...+.+|..+|. .++.......+..++.++.+..++.+..
T Consensus 322 ~~~~~~~~G~~~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~G~-----~~~~~~~~~~~~~~~~v~~~~~~l~~~~ 396 (852)
T 2xag_A 322 KGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQ-----AVPKEKDEMVEQEFNRLLEATSYLSHQL 396 (852)
T ss_dssp ETTEEEESSCCEECCSBTCHHHHHHHHTTCCEEECCCCCCEECTTSC-----BCCHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ccccchhcCceEecCCCCchHHHHHHHhCCchhhccccceEEecCCc-----cccchhhhhhhhhhhhhHHHHHHHhhhh
Confidence 99999999999999888899999999999987777667778888888 6777666677788999999999988776
Q ss_pred ccccccCCCchh--HH----HHHH-----HHHH-------HHH-------HHHHHHHHhhhhhhhhc---cCCCCCchhH
Q psy6038 263 DFNYLEGKPLSL--VI----ELQE-----ELKP-------VLS-------RMNEILVQLDTLDQTLQ---NVPIDNTTAV 314 (661)
Q Consensus 263 ~~~~~~~~p~s~--~i----~~~~-----~~~~-------~~~-------~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 314 (661)
++....+.+.++ .+ ...+ ++.. ... .+......+..+.+.+. ....+.....
T Consensus 397 ~~~~~~~~~~slg~~~e~v~~~~er~~~~e~l~~~~~i~~~~~~i~~~~~~l~~~~~~l~~l~~~~~~~~~~~~p~~~~~ 476 (852)
T 2xag_A 397 DFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITA 476 (852)
T ss_dssp CCCEETTEECBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCHHH
T ss_pred hhhcccCCCccHHHHHHHhhhhhhhhcchhHHHHhhhhhhhhhhhhhhHHHHHHhHHHHHHHHHHHhhhhcccccccchh
Confidence 665555555443 11 1000 0000 000 11111111222222111 1122334455
Q ss_pred HHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHHHHHHHhhhhhhcCCCCccccccCCCCCC
Q psy6038 315 EFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQLLDWHFANLEFANATPLASLSLKHWDQDD 394 (661)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ll~~~~~~le~~~~~~l~~lsl~~~~~~~ 394 (661)
+|..+.....+...+++|+.+......+...+..+....+..+|+++.++++++|+++++++.++..++.+++.+|.++.
T Consensus 477 e~s~rs~~~~l~~~~~~~~~l~~~~~~l~~~l~~l~~~~~~~~~ls~~~~~~l~~~~~~~e~~~~~~l~~lSl~~~~~~~ 556 (852)
T 2xag_A 477 EFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDD 556 (852)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHSCCCSCSSCTTHHHHHHHHHHHHHHHHTSCTTTBBTTTTTGGG
T ss_pred hhhhhhhhhhHHHHHHHHhhhhhhhhhHHHHHHhhhccCcccccCCHHHHHHHHHHHhhhcccccCChHhhhhhhhhhcc
Confidence 66666666666667777777666555566666666667777888999999999999999999999999999999999887
Q ss_pred CccccCCceeeccchhHHHHHHhccCceeeCceEEEEEecCCceEEEEeCCCCCCCCeEEEeCEEEEccChhhhhhcCCC
Q psy6038 395 DFEFTGSHLTVKKGYACVPTALAEGLDVHFNSSVTEIHYNSKGVTVKTVDPKTGQNETVYTGDRVLCTLPLGILKACIQP 474 (661)
Q Consensus 395 ~~~~~g~~~~v~gG~~~L~~aLa~~L~I~lnt~V~~I~~~~~gv~V~~~~~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~ 474 (661)
.+.+.|.++++++||++|+++|+++++|+||++|++|.+++++|.|++.+....+.+.+++||+||||+|+++|++.
T Consensus 557 ~~~~~g~~~~~~gG~~~L~~aLa~~l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l--- 633 (852)
T 2xag_A 557 DFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQ--- 633 (852)
T ss_dssp GGCCBSCCEEETTCTTHHHHHHTTTCCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCS---
T ss_pred ccccCCceEEecCcHHHHHHHHHhCCCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhh---
Confidence 77888999999999999999999999999999999999999999988764222233678999999999999999972
Q ss_pred CCccccCCCCCHHHHHHHHHcCCccccEEEEEccccccccCCCceeeeccCCCCCCceEEEEecCCCcEEEEEeccchhh
Q psy6038 475 PKDVLFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGSTTASRGELFLFWNLYQAPVLLALVAGEAAS 554 (661)
Q Consensus 475 ~~~i~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~vL~~~~~g~~a~ 554 (661)
.+.|.|.|+||++|.++|++++||+++||+|.|+++||+.+...||++.+....++.++.+|+.++.++|++|+.|..+.
T Consensus 634 ~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~~~pvLl~~v~G~~a~ 713 (852)
T 2xag_A 634 PPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAG 713 (852)
T ss_dssp SCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEECSSSSEEEEEECHHHHH
T ss_pred hcccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEecCCCCCEEEEEecCcCHH
Confidence 13478999999999999999999999999999999999987788998876666677778888887888999999999888
Q ss_pred hhhccc--------------CCCCCCCCCCceEEEecCCCCCCCCcccCccCCCCCCcchhhhcCCCCC-------CCCC
Q psy6038 555 ILEDVS--------------IFPTNTVPQPKETVVTRWKADPFAKGSYSFVAVGASGSDYDTLGLPVKD-------DKDI 613 (661)
Q Consensus 555 ~~~~~~--------------~fg~~~~~~p~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~la~p~~~-------~~~~ 613 (661)
.++.++ +||....++|..+.+++|..|||++|||+++.||+...+++.|++|+.. ..+.
T Consensus 714 ~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~ 793 (852)
T 2xag_A 714 IMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPI 793 (852)
T ss_dssp HGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCC
T ss_pred HHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccccccccCCC
Confidence 777665 7887667899999999999999999999999999998899999999842 2345
Q ss_pred CcEEEecccccCcCCcchhHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q psy6038 614 PRLFFAGEHTIRNYPATVHGAFLSGLKEGGHIVDQILGANYRMPGG 659 (661)
Q Consensus 614 ~rl~FAGe~t~~~~~gtv~GA~~SG~raA~~i~~~~~g~~~~~~~~ 659 (661)
+|||||||||+..|+||||||++||+|||.+|++.+.+.+...+.+
T Consensus 794 grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~~~~~~~~~ 839 (852)
T 2xag_A 794 PRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQ 839 (852)
T ss_dssp CCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCCGGGC---
T ss_pred CcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 8999999999999999999999999999999999999877766553
No 3
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=1.3e-65 Score=592.22 Aligned_cols=532 Identities=34% Similarity=0.592 Sum_probs=411.9
Q ss_pred ccccCCCccCCcccCCCcccHHHHHHHcCCCCCCCChhHhhhccccccCCccchhHHHHHHHHHHHHHhcCCCCCCCHHH
Q psy6038 15 VAKTEGDVYDEDIEYHIPEGLEGAAFQSRLPYDKMTTNEVQYFPDISNNPIHSHKTFLHIRNRILQMWLENPKVQLTLEF 94 (661)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~e~~~~p~~~~~~~~~~~~~l~irn~~~~~~~~np~~~~~~~~ 94 (661)
..+++++.+.....|.+ .+.|...| ||+|+.+|..+|||++.++ ++||+|||.||++|..||..++|.+.
T Consensus 215 ~~~~~~~~~~~~~~~~~----~~~a~~~~--p~~~~~~e~~~fp~~~~~~----~~yl~irn~il~~w~~np~~~l~~~~ 284 (776)
T 4gut_A 215 HVPGMNRYFQPFYQPNE----CGKALCVR--PDVMELDELYEFPEYSRDP----TMYLALRNLILALWYTNCKEALTPQK 284 (776)
T ss_dssp ---CCCTTCCCBCCTTC----CCCSSCBC--TTSCCHHHHHHCGGGSSCC----HHHHHHHHHHHHHHHHCTTSCCCHHH
T ss_pred cccccccccccccCCCc----cccchhcC--CCcCChHHHHhChHHHhcC----ceeeeehHHHHHHHHHCCceeeeHHH
Confidence 37788888998888887 55565544 9999999999999999983 47999999999999999999999999
Q ss_pred HhccccCCCC---cchhhHHHHHHHHHHhhHHhcCCcccc----CCCCCCCCCcEEEEccChHHHHHHHHHHHCCCcEEE
Q psy6038 95 VMQKIESPFN---SEVQLVSRLHCYLERHGYINFGIFQRI----TPIPVKKSGKVIVIGAGISGLAAARHMEQFGIEVVV 167 (661)
Q Consensus 95 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v 167 (661)
|.+.++.+.. .....++++++|+.+.+++++|+.... ..+.....++|+|||||++||+||+.|++.|++|+|
T Consensus 285 ~~~~~~~r~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v 364 (776)
T 4gut_A 285 CIPHIIVRGLVRIRCVQEVERILYFMTRKGLINTGVLSVGADQYLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTV 364 (776)
T ss_dssp HGGGCCCSSTHHHHHHHHHHHHHHHHHHHTSSSCTTCCCCGGGCSSCGGGTSCEEEEECCSHHHHHHHHHHHHHTCEEEE
T ss_pred hhhhcccccccccccHHHHHHHHHHHHHhhhhhcccccccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHHCCCcEEE
Confidence 9999987643 234567899999999999998876421 122234568999999999999999999999999999
Q ss_pred EcCCCCCCCceeccCC-CccccccccEEEeCCCCChhhHHHHhhChhhhhhcCCCcEEecCCCCCCCCcCCCchhhHHHH
Q psy6038 168 LEARERVGGRIVTFKK-SNYVADLGAMVVTGLGGNPINILARQINMELLKIGHQCPLYQSSAENSDNLQVPKDKDDLVER 246 (661)
Q Consensus 168 ~e~~~~~GG~i~t~~~-~~~~~d~G~~~i~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 246 (661)
+|+++++|||++|.+. ++..+|+|++++++...+++..+.+++|++.........++..+|. ............
T Consensus 365 ~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~~np~~~l~~~lGl~~~~~~~~~~l~~~~g~-----~~~~~~~~~~~~ 439 (776)
T 4gut_A 365 LEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGR-----ITDPTIDKRMDF 439 (776)
T ss_dssp ECSSSSSCTTCCEECCSTTCCEESSCCEEECCTTCHHHHHHHHHTCCCEECCSCCCEECTTSC-----BCCHHHHHHHHH
T ss_pred EecccceeceeeeccccCCeEeccCCeEEeCCccChHHHHHHHhCCcccccccccceEccCCc-----ccchhHHHHHHH
Confidence 9999999999999764 5889999999999988999999999999987766555666666665 221111111111
Q ss_pred HHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCCCCchhHHHhhhhhhhhHH
Q psy6038 247 EFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRMNEILVQLDTLDQTLQNVPIDNTTAVEFQKRSTRRDMN 326 (661)
Q Consensus 247 ~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (661)
.++.+++....+ ....... ....+ .+++.+
T Consensus 440 ~~~~ll~~~~~~--------------------------------------~~~~~~~----~d~sl-~~~~~~------- 469 (776)
T 4gut_A 440 HFNALLDVVSEW--------------------------------------RKDKTQL----QDVPL-GEKIEE------- 469 (776)
T ss_dssp HHHHHHHHHHHH--------------------------------------GGGCCGG----GCCBH-HHHHHH-------
T ss_pred HHHHHHHHHHHH--------------------------------------hhccccc----ccccH-HHHHHH-------
Confidence 111111111110 0000000 00000 011000
Q ss_pred HHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHHHHHHHhhhhhhcCCCCccccccCCCCCCCc-cccCCceee
Q psy6038 327 HLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQLLDWHFANLEFANATPLASLSLKHWDQDDDF-EFTGSHLTV 405 (661)
Q Consensus 327 ~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ll~~~~~~le~~~~~~l~~lsl~~~~~~~~~-~~~g~~~~v 405 (661)
. +...+.. ..+.....+...+.++...+++..+..+..+++..|+....+ .+.|.+..+
T Consensus 470 -~-------------~~~~l~~------~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~~~~~~~~~G~~~~~ 529 (776)
T 4gut_A 470 -I-------------YKAFIKE------SGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLL 529 (776)
T ss_dssp -H-------------HHHHHHH------SCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTGGGGSCCCCSCEEEC
T ss_pred -H-------------HHHHHHh------cCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhhhhhHHhcCCCeEEE
Confidence 0 0001110 111223334445667777778888888999998888764433 356778889
Q ss_pred ccchhHHHHHHhccCceeeCceEEEEEecCCceEEEEeCCCCCCCCeEEEeCEEEEccChhhhhhcCCCCCccccCCCCC
Q psy6038 406 KKGYACVPTALAEGLDVHFNSSVTEIHYNSKGVTVKTVDPKTGQNETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPLP 485 (661)
Q Consensus 406 ~gG~~~L~~aLa~~L~I~lnt~V~~I~~~~~gv~V~~~~~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~Lp 485 (661)
.+|++.|+++|+++++|++|++|++|++++++|.|++.+ |++++||+||+|+|+++|+. ..|.|.|+||
T Consensus 530 ~~G~~~l~~aLa~gl~I~l~t~V~~I~~~~~~v~V~~~~------G~~i~Ad~VIvA~P~~vL~~-----~~i~f~P~Lp 598 (776)
T 4gut_A 530 TPGYSVIIEKLAEGLDIQLKSPVQCIDYSGDEVQVTTTD------GTGYSAQKVLVTVPLALLQK-----GAIQFNPPLS 598 (776)
T ss_dssp TTCTHHHHHHHHTTSCEESSCCEEEEECSSSSEEEEETT------CCEEEESEEEECCCHHHHHT-----TCSEEESCCC
T ss_pred CChHHHHHHHHHhCCcEEcCCeeEEEEEcCCEEEEEECC------CcEEEcCEEEECCCHHHHhh-----cccccCCCCC
Confidence 999999999999999999999999999999999988865 77899999999999999987 5689999999
Q ss_pred HHHHHHHHHcCCccccEEEEEccccccccC---CCceeeeccCCCCCCceEEEEecC---CCcEEEEEeccchhhhhhcc
Q psy6038 486 DWKVKSIRRLGYGLLNKVVLCFDKIFWDPA---ENLFGHVGSTTASRGELFLFWNLY---QAPVLLALVAGEAASILEDV 559 (661)
Q Consensus 486 ~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~---~~~~g~~~~~~~~~g~~~~~~~~~---~~~vL~~~~~g~~a~~~~~~ 559 (661)
+.+.++|+++++|.++||++.|+++||+.. ...||.+......++.+..+++.. +.++|++|+.|+.+..++.+
T Consensus 599 ~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~~vL~~~i~G~~a~~l~~l 678 (776)
T 4gut_A 599 EKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTL 678 (776)
T ss_dssp HHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESCTTSCSCEEEEEECTHHHHHHHTS
T ss_pred HHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCCCCCCceEEEEEecchhHHHHHcC
Confidence 999999999999999999999999999863 356787765445566666677653 24699999999888777666
Q ss_pred c--------------CCCCCCCCCCceEEEecCCCCCCCCcccCccCCCCCCcchhhhcCCCCCCCCCCcEEEecccccC
Q psy6038 560 S--------------IFPTNTVPQPKETVVTRWKADPFAKGSYSFVAVGASGSDYDTLGLPVKDDKDIPRLFFAGEHTIR 625 (661)
Q Consensus 560 ~--------------~fg~~~~~~p~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~la~p~~~~~~~~rl~FAGe~t~~ 625 (661)
+ +||...++.|..+.+++|.+|||++|+|+++.+|+...+++.|++|+. +|||||||||+.
T Consensus 679 sdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~-----grL~FAGE~Ts~ 753 (776)
T 4gut_A 679 DDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQ-----GTVFFAGEATNR 753 (776)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBT-----TTEEECSGGGCS
T ss_pred CHHHHHHHHHHHHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCC-----CcEEEEehhhcC
Confidence 5 788767789999999999999999999999999998888999999975 899999999999
Q ss_pred cCCcchhHHHHHHHHHHHHHHH
Q psy6038 626 NYPATVHGAFLSGLKEGGHIVD 647 (661)
Q Consensus 626 ~~~gtv~GA~~SG~raA~~i~~ 647 (661)
.|+||||||++||+|||.+|++
T Consensus 754 ~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 754 HFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp SSCSSHHHHHHHHHHHHHHHHC
T ss_pred CCCcCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999975
No 4
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=5.3e-50 Score=448.10 Aligned_cols=423 Identities=24% Similarity=0.337 Sum_probs=265.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCC-CcEEEEcCCCCCCCceeccCC-CccccccccEEEeCCCCChhhHHHHhhChhhhh
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFG-IEVVVLEARERVGGRIVTFKK-SNYVADLGAMVVTGLGGNPINILARQINMELLK 216 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g-~~v~v~e~~~~~GG~i~t~~~-~~~~~d~G~~~i~~~~~~~~~~l~~~lgl~~~~ 216 (661)
.++|+|||||+|||+||+.|+++| ++|+|||+++++|||++|.+. +|..+|+|++|+++...+++..+..++++....
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg~~~~~ 87 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLNDGR 87 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHHHHHCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhCCCCcc
Confidence 478999999999999999999999 999999999999999999886 789999999999987678888888888874211
Q ss_pred hcCCCcEEecCCCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q psy6038 217 IGHQCPLYQSSAENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRMNEILVQL 296 (661)
Q Consensus 217 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~~~~~~~~ 296 (661)
..++..+|.. +.++.+..... .... ..+......+.++.+..
T Consensus 88 ----~~~~~~~~~~---~~~~~~~~~~~-----------------------~~~~--------~~~~~~~~~~~~~~~~~ 129 (516)
T 1rsg_A 88 ----TRFVFDDDNF---IYIDEERGRVD-----------------------HDKE--------LLLEIVDNEMSKFAELE 129 (516)
T ss_dssp ----CCEECCCCCC---EEEETTTEECT-----------------------TCTT--------TCHHHHHHHHHHHHHHH
T ss_pred ----eeEEECCCCE---EEEcCCCcccc-----------------------ccHH--------HHHHHHHHHHHHHHHHH
Confidence 1122222220 00110000000 0000 00000000011111000
Q ss_pred hhhhhhhccCCCCCchhHHHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHHHHHHHhhhhh
Q psy6038 297 DTLDQTLQNVPIDNTTAVEFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQLLDWHFANLEF 376 (661)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ll~~~~~~le~ 376 (661)
.. . ....++....+|+.+.. ..+. ..+.+.....+...+..++.
T Consensus 130 ~~--~---~~~~~d~s~~~~l~~~l--------~~~~-----------------------~~l~~~~~~~~~~~~~~~~~ 173 (516)
T 1rsg_A 130 FH--Q---HLGVSDCSFFQLVMKYL--------LQRR-----------------------QFLTNDQIRYLPQLCRYLEL 173 (516)
T ss_dssp C------------CCBHHHHHHHHH--------HHHG-----------------------GGSCHHHHHHHHHHHGGGHH
T ss_pred hh--h---ccCCCCCCHHHHHHHHH--------HHhh-----------------------cccCHHHHHHHHHHHHHHHH
Confidence 00 0 00001111122221110 0000 00000001111111111122
Q ss_pred hcCCCCccccccCCCCCCCccccCCceeeccchhHHHHHHhccC---ceeeCceEEEEEec-CCceEEEEeCCCCCCCCe
Q psy6038 377 ANATPLASLSLKHWDQDDDFEFTGSHLTVKKGYACVPTALAEGL---DVHFNSSVTEIHYN-SKGVTVKTVDPKTGQNET 452 (661)
Q Consensus 377 ~~~~~l~~lsl~~~~~~~~~~~~g~~~~v~gG~~~L~~aLa~~L---~I~lnt~V~~I~~~-~~gv~V~~~~~~~~~~g~ 452 (661)
..+..+..++...+.. ...+...++++ +++|+++|++.+ +|++|++|++|.++ +++|.|++.+ |+
T Consensus 174 ~~g~~~~~~s~~~~~~----~~~~~~~~~~g-~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~------g~ 242 (516)
T 1rsg_A 174 WHGLDWKLLSAKDTYF----GHQGRNAFALN-YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCED------GT 242 (516)
T ss_dssp HHTBCTTTSBHHHHCC----CCSSCCEEESC-HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETT------SC
T ss_pred HhCCChHHCChHHHHh----hccCcchhhhC-HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECC------Cc
Confidence 2233344444322111 12334456667 999999999987 49999999999986 5678888755 77
Q ss_pred EEEeCEEEEccChhhhhhcCC-CC---CccccCCCCCHHHHHHHHHcCCccccEEEEEccccccccCCCceeeeccCCC-
Q psy6038 453 VYTGDRVLCTLPLGILKACIQ-PP---KDVLFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGSTTA- 527 (661)
Q Consensus 453 ~i~AD~VV~TvP~~vL~~~~~-~~---~~i~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~~~~- 527 (661)
+++||+||+|+|+++|+.... .. +.+.|.|+||++|.++|++++||+++||++.|+++||+.+...|......+.
T Consensus 243 ~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~ 322 (516)
T 1rsg_A 243 VYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNESSKIVTLANSTNE 322 (516)
T ss_dssp EEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEEEECCCCCHH
T ss_pred EEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcEEEeCCCCcc
Confidence 899999999999999985110 00 1489999999999999999999999999999999999876443433322110
Q ss_pred --------------------------CCCce----EEEE---ecCCCcEEEEEeccchhhhhhcc--c------------
Q psy6038 528 --------------------------SRGEL----FLFW---NLYQAPVLLALVAGEAASILEDV--S------------ 560 (661)
Q Consensus 528 --------------------------~~g~~----~~~~---~~~~~~vL~~~~~g~~a~~~~~~--~------------ 560 (661)
.++.. ..++ ...+.++|++|+.|+.+..++.+ +
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l 402 (516)
T 1rsg_A 323 FVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNLSKSTGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVL 402 (516)
T ss_dssp HHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEHHHHTSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred chhhcccCcccchhhhcccccccccccccccccCceeEEEeeecCCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHH
Confidence 00000 1122 23467899999999988777665 2
Q ss_pred -----CCCC------CCCC-------CCc--eEEEecCCCCCCCCcccCccCCCCCCc-chhhhcCCCCCCCCCCcEEEe
Q psy6038 561 -----IFPT------NTVP-------QPK--ETVVTRWKADPFAKGSYSFVAVGASGS-DYDTLGLPVKDDKDIPRLFFA 619 (661)
Q Consensus 561 -----~fg~------~~~~-------~p~--~~~~~~W~~dp~~~Gsys~~~~g~~~~-~~~~la~p~~~~~~~~rl~FA 619 (661)
+||. ...+ .|. ++.+++|.+|||++||||++.||.... .++.|+++. .+|||||
T Consensus 403 ~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~-----~~rl~FA 477 (516)
T 1rsg_A 403 NKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSNGQ-----DSRIRFA 477 (516)
T ss_dssp HHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTTTTCCCCCBC----CHHHHHHHHCS-----SSSEEEC
T ss_pred HHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCCCccCCCcCCCCCHHHHHHHhccCC-----CCcEEEe
Confidence 4542 1112 255 899999999999999999999998543 346666442 3899999
Q ss_pred cccccCcCCcchhHHHHHHHHHHHHHHHHhhc
Q psy6038 620 GEHTIRNYPATVHGAFLSGLKEGGHIVDQILG 651 (661)
Q Consensus 620 Ge~t~~~~~gtv~GA~~SG~raA~~i~~~~~g 651 (661)
||||+..|+||||||++||+|||.+|++.+..
T Consensus 478 Ge~ts~~~~g~v~GA~~SG~raA~~i~~~~~~ 509 (516)
T 1rsg_A 478 GEHTIMDGAGCAYGAWESGRREATRISDLLKL 509 (516)
T ss_dssp STTSCSTTBTSHHHHHHHHHHHHHHHHHHHHG
T ss_pred ccccccCCCccchhHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999998865
No 5
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=6.7e-44 Score=399.20 Aligned_cols=426 Identities=21% Similarity=0.336 Sum_probs=273.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCC-ccccccccEEEeCCCCChhhHHHHhhChhhhhh
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKS-NYVADLGAMVVTGLGGNPINILARQINMELLKI 217 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~-~~~~d~G~~~i~~~~~~~~~~l~~~lgl~~~~~ 217 (661)
.++|+|||||+|||+||++|+++|++|+|||+++++|||+.|.+.. +..+|+|++++++. .+++..+++++|++....
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~-~~~~~~l~~~lgl~~~~~ 82 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT-QNRILRLAKELGLETYKV 82 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTT-CHHHHHHHHHTTCCEEEC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCC-cHHHHHHHHHcCCcceec
Confidence 4689999999999999999999999999999999999999999985 89999999999876 567778899999875443
Q ss_pred cCC-CcEEecCCCCCC-CCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q psy6038 218 GHQ-CPLYQSSAENSD-NLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRMNEILVQ 295 (661)
Q Consensus 218 ~~~-~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~~~~~~~ 295 (661)
... ..++..+|.... .-.+|..........+..++. .+.++...
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~ 128 (520)
T 1s3e_A 83 NEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWR----------------------------------TMDDMGRE 128 (520)
T ss_dssp CCSSEEEEEETTEEEEECSSSCCCCSHHHHHHHHHHHH----------------------------------HHHHHHTT
T ss_pred ccCCceEEEECCEEEEecCCCCCCCCHHHHHHHHHHHH----------------------------------HHHHHHhh
Confidence 222 233334443100 000111010000001111110 01111000
Q ss_pred hhhhhhhhccCC---CCCchhHHHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHHHHHHHh
Q psy6038 296 LDTLDQTLQNVP---IDNTTAVEFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQLLDWHFA 372 (661)
Q Consensus 296 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ll~~~~~ 372 (661)
+.. ...+.... .......+|+.+...... ....+...+......++..... . +++.
T Consensus 129 ~~~-~~~~~~~~~~~~~~~s~~~~l~~~~~~~~------------~~~~~~~~~~~~~g~~~~~~s~----~----~~~~ 187 (520)
T 1s3e_A 129 IPS-DAPWKAPLAEEWDNMTMKELLDKLCWTES------------AKQLATLFVNLCVTAETHEVSA----L----WFLW 187 (520)
T ss_dssp SCT-TCGGGSTTHHHHHTSBHHHHHHHHCSSHH------------HHHHHHHHHHHHHSSCTTTSBH----H----HHHH
T ss_pred cCc-CCCccccchhhhhccCHHHHHHhhCCCHH------------HHHHHHHHHhhhcCCChHHhHH----H----HHHH
Confidence 000 00000000 000001222221111000 0000111111122222211110 0 0000
Q ss_pred hhhhhcCCCCccccccCCCCCCCccccCCceeeccchhHHHHHHhc--cCceeeCceEEEEEecCCceEEEEeCCCCCCC
Q psy6038 373 NLEFANATPLASLSLKHWDQDDDFEFTGSHLTVKKGYACVPTALAE--GLDVHFNSSVTEIHYNSKGVTVKTVDPKTGQN 450 (661)
Q Consensus 373 ~le~~~~~~l~~lsl~~~~~~~~~~~~g~~~~v~gG~~~L~~aLa~--~L~I~lnt~V~~I~~~~~gv~V~~~~~~~~~~ 450 (661)
.+.. .+ .+..+ +. ....+...++++|+++|+++|++ +.+|++|++|++|.++++++.|++.+
T Consensus 188 ~~~~-~g-~~~~~----~~----~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~v~v~~~~------ 251 (520)
T 1s3e_A 188 YVKQ-CG-GTTRI----IS----TTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQTRENVLVETLN------ 251 (520)
T ss_dssp HHHT-TT-CHHHH----HC----STTSTTSEEETTCTHHHHHHHHHHHGGGEESSCCEEEEECSSSSEEEEETT------
T ss_pred HHhh-cC-chhhh----cc----cCCCcceEEEeCCHHHHHHHHHHHcCCcEEcCCeeEEEEECCCeEEEEECC------
Confidence 0000 00 00000 00 00123457899999999999998 45899999999999988888887755
Q ss_pred CeEEEeCEEEEccChhhhhhcCCCCCccccCCCCCHHHHHHHHHcCCccccEEEEEccccccccCCCceeeeccCCCCCC
Q psy6038 451 ETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGSTTASRG 530 (661)
Q Consensus 451 g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~~~~~~g 530 (661)
|+++.||+||+|+|+.++++ +.|+|+||+.+.++|++++++.+.||++.|+++||+.. .+.|.+... ...+
T Consensus 252 g~~~~ad~VI~a~p~~~l~~-------l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~-~~~g~~~~~-~~~~ 322 (520)
T 1s3e_A 252 HEMYEAKYVISAIPPTLGMK-------IHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKK-DYCGTMIID-GEEA 322 (520)
T ss_dssp SCEEEESEEEECSCGGGGGG-------SEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGGGG-TEEEEEEEC-STTC
T ss_pred CeEEEeCEEEECCCHHHHcc-------eeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcccCC-CCCceeecc-CCCC
Confidence 77899999999999999988 88999999999999999999999999999999999764 233433211 1123
Q ss_pred ceEEEEecC----CCcEEEEEeccchhhhhhccc--------------CCCCCCCCCCceEEEecCCCCCCCCcccC-cc
Q psy6038 531 ELFLFWNLY----QAPVLLALVAGEAASILEDVS--------------IFPTNTVPQPKETVVTRWKADPFAKGSYS-FV 591 (661)
Q Consensus 531 ~~~~~~~~~----~~~vL~~~~~g~~a~~~~~~~--------------~fg~~~~~~p~~~~~~~W~~dp~~~Gsys-~~ 591 (661)
.+..+|+.+ +.++|++|+.|..+..++.++ +|+....+.|..+.+++|..|||++|+|+ ++
T Consensus 323 ~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~ 402 (520)
T 1s3e_A 323 PVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYF 402 (520)
T ss_dssp SCSEEEECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTCGGGGCCSEEEEEEGGGCTTTCSSSCBCC
T ss_pred ceEEEeeCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCccccCCccEEEEEeeCCCCCCCCCCcccc
Confidence 334445432 237999999887776665543 67764456899999999999999999998 88
Q ss_pred CCCCCCcchhhhcCCCCCCCCCCcEEEecccccCcCCcchhHHHHHHHHHHHHHHHHhhc
Q psy6038 592 AVGASGSDYDTLGLPVKDDKDIPRLFFAGEHTIRNYPATVHGAFLSGLKEGGHIVDQILG 651 (661)
Q Consensus 592 ~~g~~~~~~~~la~p~~~~~~~~rl~FAGe~t~~~~~gtv~GA~~SG~raA~~i~~~~~g 651 (661)
.||......+.+++|+ ++||||||+|+..|+||||||++||.|||++|++.+..
T Consensus 403 ~~g~~~~~~~~l~~p~------~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~~ 456 (520)
T 1s3e_A 403 PPGILTQYGRVLRQPV------DRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGK 456 (520)
T ss_dssp CTTHHHHHGGGTTCCB------TTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCccccchHHHhCCC------CCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHHHHhc
Confidence 8886433334566665 79999999999989999999999999999999998854
No 6
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=7.7e-44 Score=389.19 Aligned_cols=217 Identities=20% Similarity=0.313 Sum_probs=177.9
Q ss_pred eeccchhHHHHHHhccC-ceeeCceEEEEEecCCceEEEEeCCCCCCCCeEEEeCEEEEccChhhhhhcCCCCCccccCC
Q psy6038 404 TVKKGYACVPTALAEGL-DVHFNSSVTEIHYNSKGVTVKTVDPKTGQNETVYTGDRVLCTLPLGILKACIQPPKDVLFNP 482 (661)
Q Consensus 404 ~v~gG~~~L~~aLa~~L-~I~lnt~V~~I~~~~~gv~V~~~~~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P 482 (661)
.+.+|++.+++++++.+ +|++|++|++|+++++++.|++.+ |++++||+||+|+|+++|+. +.|.|
T Consensus 201 ~~~~g~~~l~~~~~~~~g~i~~~~~V~~i~~~~~~v~v~~~~------g~~~~ad~vi~a~~~~~l~~-------i~~~p 267 (431)
T 3k7m_X 201 VFSNGSADLVDAMSQEIPEIRLQTVVTGIDQSGDVVNVTVKD------GHAFQAHSVIVATPMNTWRR-------IVFTP 267 (431)
T ss_dssp EETTCTHHHHHHHHTTCSCEESSCCEEEEECSSSSEEEEETT------SCCEEEEEEEECSCGGGGGG-------SEEES
T ss_pred hcCCcHHHHHHHHHhhCCceEeCCEEEEEEEcCCeEEEEECC------CCEEEeCEEEEecCcchHhh-------eeeCC
Confidence 67899999999999866 899999999999998899888755 67899999999999999998 89999
Q ss_pred CCCHHHHHHHHHcCCccccEEEEEccccccccCCCceeeeccCCCCCCceEEEEec-CCCcEEEEEeccchhh------h
Q psy6038 483 PLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGSTTASRGELFLFWNL-YQAPVLLALVAGEAAS------I 555 (661)
Q Consensus 483 ~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~~~~~~g~~~~~~~~-~~~~vL~~~~~g~~a~------~ 555 (661)
+||..+.++++.+.++..+||++.|+++||. +++ .. ......++..... .+..+|++++.|+... .
T Consensus 268 ~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~~----i~~-~~--d~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ 340 (431)
T 3k7m_X 268 ALPERRRSVIEEGHGGQGLKILIHVRGAEAG----IEC-VG--DGIFPTLYDYCEVSESERLLVAFTDSGSFDPTDIGAV 340 (431)
T ss_dssp CCCHHHHHHHHHCCCCCEEEEEEEEESCCTT----EEE-EB--SSSSSEEEEEEECSSSEEEEEEEEETTTCCTTCHHHH
T ss_pred CCCHHHHHHHHhCCCcceEEEEEEECCCCcC----ceE-cC--CCCEEEEEeCcCCCCCCeEEEEEeccccCCCCCHHHH
Confidence 9999999999999999999999999999863 444 11 1111222222223 3457899998876511 1
Q ss_pred hhccc-CCCCCCCCCCceEEEecCCCCCCCCcccCccCCCCCCcchhhhcCCCCCCCCCCcEEEecccccCcCCcchhHH
Q psy6038 556 LEDVS-IFPTNTVPQPKETVVTRWKADPFAKGSYSFVAVGASGSDYDTLGLPVKDDKDIPRLFFAGEHTIRNYPATVHGA 634 (661)
Q Consensus 556 ~~~~~-~fg~~~~~~p~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~la~p~~~~~~~~rl~FAGe~t~~~~~gtv~GA 634 (661)
.+.+. +|++ .+ |.++..++|..|||++|+||+++||+...+++.|++|+ +|||||||||+..|+||||||
T Consensus 341 ~~~l~~~~~~--~~-~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~------g~~~fAGe~t~~~~~g~~~GA 411 (431)
T 3k7m_X 341 KDAVLYYLPE--VE-VLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPA------GRIHFVGSDVSLEFPGYIEGA 411 (431)
T ss_dssp HHHHHHHCTT--CE-EEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCB------TTEEECSGGGCSSSTTSHHHH
T ss_pred HHHHHHhcCC--CC-ccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCC------CcEEEEehhhhccCCeEehHH
Confidence 11111 5543 23 78899999999999999999999999888899999986 799999999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q psy6038 635 FLSGLKEGGHIVDQI 649 (661)
Q Consensus 635 ~~SG~raA~~i~~~~ 649 (661)
++||+|||.+|+...
T Consensus 412 ~~sg~raa~~i~~~~ 426 (431)
T 3k7m_X 412 LETAECAVNAILHSH 426 (431)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999998753
No 7
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=1e-42 Score=384.89 Aligned_cols=416 Identities=30% Similarity=0.496 Sum_probs=275.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCCCCCCceeccCCCccccccccEEEeC---CCCChhhHHHHh-hCh
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARERVGGRIVTFKKSNYVADLGAMVVTG---LGGNPINILARQ-INM 212 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~~~GG~i~t~~~~~~~~d~G~~~i~~---~~~~~~~~l~~~-lgl 212 (661)
..++|+|||||++||+||+.|++.|+ +|+|+|+++++||++.+.+..+..+|+|++|+++ ...+++..++++ +|+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lgl 82 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGVNGGKMNPIWPIVNSTLKL 82 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEESSCCEEEEESSSSCCTHHHHHHTTSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcCC
Confidence 35789999999999999999999999 8999999999999999999899999999999985 345788889999 898
Q ss_pred hhhhhcC---CCcEEecCCCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHH
Q psy6038 213 ELLKIGH---QCPLYQSSAENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRM 289 (661)
Q Consensus 213 ~~~~~~~---~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~ 289 (661)
....... ...++..+|. .++.. .....+. . ...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~g~-----~~~~~---~~~~~~~-------~----------------------------~~~~ 119 (472)
T 1b37_A 83 RNFRSDFDYLAQNVYKEDGG-----VYDED---YVQKRIE-------L----------------------------ADSV 119 (472)
T ss_dssp CEEECCCTTGGGCEECSSSS-----BCCHH---HHHHHHH-------H----------------------------HHHH
T ss_pred ceeeccCccccceeEcCCCC-----CCCHH---HHHHHHH-------H----------------------------HHHH
Confidence 6532111 1234544555 22210 0000000 0 0001
Q ss_pred HHHHHHhhhhhhhhccCCCCCchhHHHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHHHHH
Q psy6038 290 NEILVQLDTLDQTLQNVPIDNTTAVEFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQLLDW 369 (661)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ll~~ 369 (661)
..+.+.+.. .+.. ...+.++.... ..+...... ....+ ...++++
T Consensus 120 ~~~~~~~~~---~~~~-~~~~~~s~~~~--------------------------~~l~~~~~~----~~~~~-~~~~~~~ 164 (472)
T 1b37_A 120 EEMGEKLSA---TLHA-SGRDDMSILAM--------------------------QRLNEHQPN----GPATP-VDMVVDY 164 (472)
T ss_dssp HHHHHHHHH---TSCT-TCTTCCBHHHH--------------------------HHHHHTSSS----SCCSH-HHHHHHH
T ss_pred HHHHHHHHH---hhcc-ccchhhhHHHH--------------------------HHHhhhccc----ccccH-HHHHHHH
Confidence 111111110 0000 00011110000 000000000 00001 1122333
Q ss_pred HHhhhhhhcCCCCccccccCCCCCCCc-cccCCcee--eccchhHHHHHHhccC-------------ceeeCceEEEEEe
Q psy6038 370 HFANLEFANATPLASLSLKHWDQDDDF-EFTGSHLT--VKKGYACVPTALAEGL-------------DVHFNSSVTEIHY 433 (661)
Q Consensus 370 ~~~~le~~~~~~l~~lsl~~~~~~~~~-~~~g~~~~--v~gG~~~L~~aLa~~L-------------~I~lnt~V~~I~~ 433 (661)
+....++ +.+...+|+..+.....+ .+.+..+. +++|+++|+++|++.+ +|++|++|++|.+
T Consensus 165 ~~~~~~~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~ 242 (472)
T 1b37_A 165 YKFDYEF--AEPPRVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKY 242 (472)
T ss_dssp HHTHHHH--SSCGGGBBSTTTSSCHHHHHHCSEEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEE
T ss_pred HHHhhhh--cccccccchhhccccccccccCCceeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEE
Confidence 3322221 223333444332211111 11222233 3799999999998754 6999999999999
Q ss_pred cCCceEEEEeCCCCCCCCeEEEeCEEEEccChhhhhhcCCCCCccccCCCCCHHHHHHHHHcCCccccEEEEEccccccc
Q psy6038 434 NSKGVTVKTVDPKTGQNETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWD 513 (661)
Q Consensus 434 ~~~gv~V~~~~~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~ 513 (661)
+++++.|++.+ |++++||+||+|+|+++|+. ..+.|.|+||+.+.++|++++++.++||++.|+++||+
T Consensus 243 ~~~~v~v~~~~------g~~~~ad~vI~a~~~~~l~~-----~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~ 311 (472)
T 1b37_A 243 SPGGVTVKTED------NSVYSADYVMVSASLGVLQS-----DLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWP 311 (472)
T ss_dssp CSSCEEEEETT------SCEEEESEEEECSCHHHHHT-----TSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSC
T ss_pred cCCcEEEEECC------CCEEEcCEEEEecCHHHhcc-----CCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCC
Confidence 99898888765 77899999999999999998 45779999999999999999999999999999999998
Q ss_pred cCCCceeeeccCCCCCCceEEEEe----cCCCcEEEEEeccchhhhhhccc--------------CCCCCCCCCCceEEE
Q psy6038 514 PAENLFGHVGSTTASRGELFLFWN----LYQAPVLLALVAGEAASILEDVS--------------IFPTNTVPQPKETVV 575 (661)
Q Consensus 514 ~~~~~~g~~~~~~~~~g~~~~~~~----~~~~~vL~~~~~g~~a~~~~~~~--------------~fg~~~~~~p~~~~~ 575 (661)
... ..++.......++....+.. .++.++|++++.|+.+..++.++ +|+....++|..+.+
T Consensus 312 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg~~~~~~~~~~~ 390 (472)
T 1b37_A 312 EGK-GREFFLYASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGKDVPDATDILV 390 (472)
T ss_dssp CST-TCSEEEECCSSTTSSCEEEECTTTSTTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTTSCCCCCSEEEC
T ss_pred CCC-CcceEEecccCCccceeeecccCCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCCCCCCCCceEEe
Confidence 631 12222111112222222221 12456888888776665555443 775444678899999
Q ss_pred ecCCCCCCCCcccCccCCCCCCcchhhhcCCCCCCCCCCcEEEecccccCcCCcchhHHHHHHHHHHHHHHHHhhc
Q psy6038 576 TRWKADPFAKGSYSFVAVGASGSDYDTLGLPVKDDKDIPRLFFAGEHTIRNYPATVHGAFLSGLKEGGHIVDQILG 651 (661)
Q Consensus 576 ~~W~~dp~~~Gsys~~~~g~~~~~~~~la~p~~~~~~~~rl~FAGe~t~~~~~gtv~GA~~SG~raA~~i~~~~~g 651 (661)
++|..|||++|+|+++.+|.....++.+++|+ ++||||||+|+..++||||||++||+|||++|++.+..
T Consensus 391 ~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~------~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 391 PRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPV------GRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQK 460 (472)
T ss_dssp CCTTTCTTTSSSEEECBTTCCHHHHHHHHCCB------TTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCcccCCCCCCCChhHHHHHhccC------CcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999988998766678888887 69999999999988999999999999999999999874
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=3e-43 Score=391.55 Aligned_cols=417 Identities=18% Similarity=0.219 Sum_probs=261.4
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCccccccccEEEeCCCCChhhHHHHhhChh--hhhh
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSNYVADLGAMVVTGLGGNPINILARQINME--LLKI 217 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~~~~d~G~~~i~~~~~~~~~~l~~~lgl~--~~~~ 217 (661)
++|+|||||++||+||+.|+++|++|+|||+++++|||++|++.++..+|+|++++++... .+..+++++|+. +...
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~-~~~~~l~~lgl~~~~~~~ 118 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQS-HVWREITRYKMHNALSPS 118 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSH-HHHHHHHHTTCTTCEEES
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccH-HHHHHHHHcCCcceeecc
Confidence 7999999999999999999999999999999999999999999999999999999986543 455777888883 3222
Q ss_pred c---C-CCcEEecC--CCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHHHH
Q psy6038 218 G---H-QCPLYQSS--AENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRMNE 291 (661)
Q Consensus 218 ~---~-~~~~~~~~--G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~~~ 291 (661)
. . ...++..+ |. ...++.. .. ...+...+. .++. ....
T Consensus 119 ~~~~~~~~~~~~~~~~g~---~~~~~~~--~~-~~~~~~~~~--~~~~-~~~~--------------------------- 162 (495)
T 2vvm_A 119 FNFSRGVNHFQLRTNPTT---STYMTHE--AE-DELLRSALH--KFTN-VDGT--------------------------- 162 (495)
T ss_dssp CCCSSSCCEEEEESSTTC---CEEECHH--HH-HHHHHHHHH--HHHC-SSSS---------------------------
T ss_pred cccCCCceEEEecCCCCc---eeecCHH--HH-HHHHHHHHH--HHHc-cchh---------------------------
Confidence 1 1 12333333 22 1111110 00 000111000 0000 0000
Q ss_pred HHHHhhhhhh-hhccCCCCCchhHHHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHHHHHH
Q psy6038 292 ILVQLDTLDQ-TLQNVPIDNTTAVEFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQLLDWH 370 (661)
Q Consensus 292 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ll~~~ 370 (661)
....... .+.. ........+. ...+.+++++... .+++..++++..+
T Consensus 163 ---~~~~~~~~~~~~--~~~~~~~~~~----~~s~~~~l~~~~~-----------------------~~~~~~~~~~~~~ 210 (495)
T 2vvm_A 163 ---NGRTVLPFPHDM--FYVPEFRKYD----EMSYSERIDQIRD-----------------------ELSLNERSSLEAF 210 (495)
T ss_dssp ---TTTTTCSCTTST--TSSTTHHHHH----TSBHHHHHHHHGG-----------------------GCCHHHHHHHHHH
T ss_pred ---hhhhcCCCCCCc--ccCcchhhhh----hhhHHHHHHHhhc-----------------------cCCHHHHHHHHHH
Confidence 0000000 0000 0000000000 0001111111100 0111112222222
Q ss_pred HhhhhhhcCCCCccccccCCCC-----CC---CccccCCceeeccchhHHHHHHhcc------CceeeCceEEEEEecCC
Q psy6038 371 FANLEFANATPLASLSLKHWDQ-----DD---DFEFTGSHLTVKKGYACVPTALAEG------LDVHFNSSVTEIHYNSK 436 (661)
Q Consensus 371 ~~~le~~~~~~l~~lsl~~~~~-----~~---~~~~~g~~~~v~gG~~~L~~aLa~~------L~I~lnt~V~~I~~~~~ 436 (661)
+.. ..+.+...+|+..... .. .+......+++++|+++|+++|++. ++|++|++|++|+.+++
T Consensus 211 ~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~ 287 (495)
T 2vvm_A 211 ILL---CSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERD 287 (495)
T ss_dssp HHH---HHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSS
T ss_pred HHH---hcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCC
Confidence 111 1112222222210000 00 0001223567899999999999875 44999999999999888
Q ss_pred ceEEEEeCCCCCCCCeEEEeCEEEEccChhhhhhcCCCCCccccCCCCCHHHHHHHHHcCCccccEEEEEccccccccCC
Q psy6038 437 GVTVKTVDPKTGQNETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAE 516 (661)
Q Consensus 437 gv~V~~~~~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~ 516 (661)
++.|++.+ |++++||+||+|+|+++|++ +.|.|+||+.+.++|++++|++++||++.|+++||+
T Consensus 288 ~v~v~~~~------g~~~~ad~vI~a~~~~~l~~-------i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~~~--- 351 (495)
T 2vvm_A 288 AARVTARD------GREFVAKRVVCTIPLNVLST-------IQFSPALSTERISAMQAGHVSMCTKVHAEVDNKDMR--- 351 (495)
T ss_dssp SEEEEETT------CCEEEEEEEEECCCGGGGGG-------SEEESCCCHHHHHHHHHCCCCCCEEEEEEESCGGGG---
T ss_pred EEEEEECC------CCEEEcCEEEECCCHHHHhh-------eeeCCCCCHHHHHHHHhcCCCceeEEEEEECCccCC---
Confidence 88887754 67899999999999999998 889999999999999999999999999999999994
Q ss_pred CceeeeccCCCCCCceEEEEec----CCCcEEEEEeccchhh---------hhhccc-CCCCCCCCCCceEEEecCCCCC
Q psy6038 517 NLFGHVGSTTASRGELFLFWNL----YQAPVLLALVAGEAAS---------ILEDVS-IFPTNTVPQPKETVVTRWKADP 582 (661)
Q Consensus 517 ~~~g~~~~~~~~~g~~~~~~~~----~~~~vL~~~~~g~~a~---------~~~~~~-~fg~~~~~~p~~~~~~~W~~dp 582 (661)
.+.|...++ . .+...|.. .+.++|++|+.+ .+. .++.+. +++. .+.|..+.+++|..||
T Consensus 352 ~~~g~~~~~---~-~~~~~~~~~~~~~~~~vl~~~~~~-~~~~~~~e~~~~~~~~L~~~~~~--~~~~~~~~~~~W~~dp 424 (495)
T 2vvm_A 352 SWTGIAYPF---N-KLCYAIGDGTTPAGNTHLVCFGNS-ANHIQPDEDVRETLKAVGQLAPG--TFGVKRLVFHNWVKDE 424 (495)
T ss_dssp GEEEEECSS---C-SSCEEEEEEECTTSCEEEEEEECS-TTCCCTTTCHHHHHHHHHTTSTT--SCCEEEEEECCTTTCT
T ss_pred CceeEecCC---C-CcEEEecCCCCCCCCeEEEEEeCc-cccCCCHHHHHHHHHHHHHhcCC--CCCceEEEEeEcCCCC
Confidence 344544321 1 22222321 244688887743 221 111111 5543 3678899999999999
Q ss_pred CCCcccCccCCCCCCcchhhhcCCCCCCCCCCcEEEecccccCcCCcchhHHHHHHHHHHHHHHHHhhcCCCCCCC
Q psy6038 583 FAKGSYSFVAVGASGSDYDTLGLPVKDDKDIPRLFFAGEHTIRNYPATVHGAFLSGLKEGGHIVDQILGANYRMPG 658 (661)
Q Consensus 583 ~~~Gsys~~~~g~~~~~~~~la~p~~~~~~~~rl~FAGe~t~~~~~gtv~GA~~SG~raA~~i~~~~~g~~~~~~~ 658 (661)
|++|+|+++.||.....++.+++|. +|||||||||+..|+||||||++||+|||++|++.+.+ +.++|.
T Consensus 425 ~~~g~y~~~~~g~~~~~~~~l~~p~------~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~~-~~~~~~ 493 (495)
T 2vvm_A 425 FAKGAWFFSRPGMVSECLQGLREKH------GGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELGT-KREVKA 493 (495)
T ss_dssp TTSSSSCCCCTTHHHHHHHHHHCCB------TTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHCC-C-----
T ss_pred CCCCCccCcCCCcchhhHHHHhCcC------CCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhcc-ccCCCC
Confidence 9999999999998656678888886 79999999999889999999999999999999999855 566654
No 9
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=2.3e-41 Score=372.07 Aligned_cols=419 Identities=22% Similarity=0.324 Sum_probs=263.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCccccccccEEEeCCCCChhhHHHHhhChhhhhhc
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSNYVADLGAMVVTGLGGNPINILARQINMELLKIG 218 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~~~~d~G~~~i~~~~~~~~~~l~~~lgl~~~~~~ 218 (661)
.++|+|||||++||+||++|+++|++|+|||+++++||++.+.+.++..+|+|++++++. .+.+..+++++|++.....
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~-~~~~~~~~~~~g~~~~~~~ 83 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPD-QTALISLLDELGLKTFERY 83 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTT-CHHHHHHHHHTTCCEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCc-cHHHHHHHHHcCCcccccc
Confidence 468999999999999999999999999999999999999999888888999999998754 4567788899998654322
Q ss_pred C-CCcEEecC-CCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q psy6038 219 H-QCPLYQSS-AENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRMNEILVQL 296 (661)
Q Consensus 219 ~-~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~~~~~~~~ 296 (661)
. ...++... |.. ..+..... +.+. .....+......+..+.+.+
T Consensus 84 ~~~~~~~~~~~g~~---~~~~~~~~-----------------------------~~~~--~~~~~~~~~~~~~~~~~~~~ 129 (453)
T 2yg5_A 84 REGESVYISSAGER---TRYTGDSF-----------------------------PTNE--TTKKEMDRLIDEMDDLAAQI 129 (453)
T ss_dssp CCSEEEEECTTSCE---EEECSSSC-----------------------------SCCH--HHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCce---eeccCCCC-----------------------------CCCh--hhHHHHHHHHHHHHHHHhhc
Confidence 1 12233322 320 00000000 0000 00000001111111111111
Q ss_pred hhhhhhhccCC---CCCchhHHHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCC-ccccChhhHHHHHHHHh
Q psy6038 297 DTLDQTLQNVP---IDNTTAVEFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPA-DVYLSVKDRQLLDWHFA 372 (661)
Q Consensus 297 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~ll~~~~~ 372 (661)
.. ...+.... .......+|+.+..... .....+...+......++. .. +. ...+.+. .
T Consensus 130 ~~-~~~~~~~~~~~~~~~s~~~~l~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~--s~--~~~~~~~-~ 191 (453)
T 2yg5_A 130 GA-EEPWAHPLARDLDTVSFKQWLINQSDDA------------EARDNIGLFIAGGMLTKPAHSF--SA--LQAVLMA-A 191 (453)
T ss_dssp CS-SCGGGSTTHHHHHSSBHHHHHHHHCSCH------------HHHHHHHHHHCCCCCCSCTTSS--BH--HHHHHHH-H
T ss_pred CC-CCCCCCcchhhhhhccHHHHHHhhcCCH------------HHHHHHHHHHHhhcccCCcccc--cH--HHHHHHh-c
Confidence 00 00000000 00000112221111000 0000011111111111111 11 00 0011100 0
Q ss_pred hhhhhcCCCCccccccCCCCCCCccccCCceeeccchhHHHHHHhccC--ceeeCceEEEEEecCCc-eEEEEeCCCCCC
Q psy6038 373 NLEFANATPLASLSLKHWDQDDDFEFTGSHLTVKKGYACVPTALAEGL--DVHFNSSVTEIHYNSKG-VTVKTVDPKTGQ 449 (661)
Q Consensus 373 ~le~~~~~~l~~lsl~~~~~~~~~~~~g~~~~v~gG~~~L~~aLa~~L--~I~lnt~V~~I~~~~~g-v~V~~~~~~~~~ 449 (661)
. .+ ....+ . . ...+..++++||+++|+++|++.+ +|++|++|++|..++++ +.|++ +
T Consensus 192 ~----~g-~~~~~--~--~-----~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~v~v~~-~----- 251 (453)
T 2yg5_A 192 S----AG-SFSHL--V--D-----EDFILDKRVIGGMQQVSIRMAEALGDDVFLNAPVRTVKWNESGATVLAD-G----- 251 (453)
T ss_dssp H----TT-CHHHH--H--C-----HHHHTCEEETTCTHHHHHHHHHHHGGGEECSCCEEEEEEETTEEEEEET-T-----
T ss_pred c----CC-cHhhh--c--c-----CCCcceEEEcCChHHHHHHHHHhcCCcEEcCCceEEEEEeCCceEEEEE-C-----
Confidence 0 00 00000 0 0 001235789999999999999866 89999999999998887 77664 3
Q ss_pred CCeEEEeCEEEEccChhhhhhcCCCCCccccCCCCCHHHHHHHHHcCCccccEEEEEccccccccCCCceeeeccCCCCC
Q psy6038 450 NETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGSTTASR 529 (661)
Q Consensus 450 ~g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~~~~~~ 529 (661)
+++++||+||+|+|+.++++ +.|.|+||+.+.+++++++++.+.||++.|+++||+.. ...|.+.. ..
T Consensus 252 -~~~~~ad~VI~a~p~~~~~~-------l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~-~~~g~~~~---~~ 319 (453)
T 2yg5_A 252 -DIRVEASRVILAVPPNLYSR-------ISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWRED-GLSGTGFG---AS 319 (453)
T ss_dssp -TEEEEEEEEEECSCGGGGGG-------SEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGGGGG-TEEEEEEC---TT
T ss_pred -CeEEEcCEEEEcCCHHHHhc-------CEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCCCCC-CCCceeec---CC
Confidence 67899999999999999988 88999999999999999999999999999999999764 23343322 12
Q ss_pred CceEEEEecC----CCcEEEEEeccchhhhhhccc--------------CCCCCCCCCCceEEEecCCCCCCCCcccC-c
Q psy6038 530 GELFLFWNLY----QAPVLLALVAGEAASILEDVS--------------IFPTNTVPQPKETVVTRWKADPFAKGSYS-F 590 (661)
Q Consensus 530 g~~~~~~~~~----~~~vL~~~~~g~~a~~~~~~~--------------~fg~~~~~~p~~~~~~~W~~dp~~~Gsys-~ 590 (661)
+.+..+++.+ +.++|++++.|+.+..++.++ +|+. .++.|..+.+++|..|||++|+|+ +
T Consensus 320 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~-~~~~p~~~~~~~W~~~~~~~G~~~~~ 398 (453)
T 2yg5_A 320 EVVQEVYDNTNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGP-KAEEPVVYYESDWGSEEWTRGCYAAS 398 (453)
T ss_dssp SSSCEEEECCCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCG-GGGCCSEEEECCTTTCTTTCSSSCEE
T ss_pred CCeEEEEeCCCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCc-cCCCccEEEEeecCCCCCCCCCCcCc
Confidence 2333444432 246899999887766554443 6764 356889999999999999999997 6
Q ss_pred cCCCCCCcchhhhcCCCCCCCCCCcEEEecccccCcCCcchhHHHHHHHHHHHHHHHHh
Q psy6038 591 VAVGASGSDYDTLGLPVKDDKDIPRLFFAGEHTIRNYPATVHGAFLSGLKEGGHIVDQI 649 (661)
Q Consensus 591 ~~~g~~~~~~~~la~p~~~~~~~~rl~FAGe~t~~~~~gtv~GA~~SG~raA~~i~~~~ 649 (661)
+.||......+.+++|+ ++||||||+|+..|+|+||||++||.|||++|++.+
T Consensus 399 ~~~g~~~~~~~~~~~p~------~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 451 (453)
T 2yg5_A 399 FDLGGLHRYGADSRTPV------GPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARS 451 (453)
T ss_dssp ECTTHHHHHGGGTTCCB------TTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCccccchHHHhCCc------CceEEeecccccccccchHHHHHHHHHHHHHHHHHh
Confidence 77875433334566665 799999999998899999999999999999999875
No 10
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=3.2e-41 Score=375.52 Aligned_cols=231 Identities=23% Similarity=0.345 Sum_probs=180.3
Q ss_pred CceeeccchhHHHHHHhccC--ceeeCceEEEEEecCCceEEEEeCCCCCCCCeEEEeCEEEEccChhhhhhcCCCCCcc
Q psy6038 401 SHLTVKKGYACVPTALAEGL--DVHFNSSVTEIHYNSKGVTVKTVDPKTGQNETVYTGDRVLCTLPLGILKACIQPPKDV 478 (661)
Q Consensus 401 ~~~~v~gG~~~L~~aLa~~L--~I~lnt~V~~I~~~~~gv~V~~~~~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~~~~i 478 (661)
..++++||+++|+++|++.+ +|++|++|++|.+++++|.|++.++.. ...+++||+||+|+|+.++.+ |
T Consensus 232 ~~~~~~gG~~~l~~~l~~~l~~~i~~~~~V~~I~~~~~~v~v~~~~~~~--~~~~~~ad~vI~t~p~~~~~~-------i 302 (498)
T 2iid_A 232 RFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVVYETLSK--ETPSVTADYVIVCTTSRAVRL-------I 302 (498)
T ss_dssp CEEEETTCTTHHHHHHHHHTGGGEESSCEEEEEEECSSCEEEEEECSSS--CCCEEEESEEEECSCHHHHTT-------S
T ss_pred ceEEeCCcHHHHHHHHHHhcccccccCCEEEEEEECCCeEEEEEecCCc--ccceEEeCEEEECCChHHHhh-------e
Confidence 45678999999999999988 799999999999998899888765210 023689999999999999988 8
Q ss_pred ccCCCCCHHHHHHHHHcCCccccEEEEEccccccccCCCceeeeccCCCCCCceEEEEec----CCCcEEEEEeccchhh
Q psy6038 479 LFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGSTTASRGELFLFWNL----YQAPVLLALVAGEAAS 554 (661)
Q Consensus 479 ~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~~~~~~g~~~~~~~~----~~~~vL~~~~~g~~a~ 554 (661)
.|.|+||+.+.++|++++|+.++||+|.|+++||+.+ .++|..... .....+.+|.. .+.++|++|+.|+.+.
T Consensus 303 ~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~w~~~-~~~~~~~~~--~~~~~~~~~~s~~~p~g~~~L~~~~~g~~a~ 379 (498)
T 2iid_A 303 KFNPPLLPKKAHALRSVHYRSGTKIFLTCTTKFWEDD-GIHGGKSTT--DLPSRFIYYPNHNFTNGVGVIIAYGIGDDAN 379 (498)
T ss_dssp EEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGGG-TCCSSEEEE--SSTTCEEECCSSCCTTSCEEEEEEEEHHHHH
T ss_pred ecCCCCCHHHHHHHHhCCCcceeEEEEEeCCCCccCC-CccCCcccC--CCCcceEEECCCCCCCCCcEEEEEeCCccHh
Confidence 9999999999999999999999999999999999864 233322111 11122344432 2345999999888776
Q ss_pred hhhccc--------------CCCCCC--CC-CCceEEEecCCCCCCCCcccCccCCCCCCcchhhhcCCCCCCCCCCcEE
Q psy6038 555 ILEDVS--------------IFPTNT--VP-QPKETVVTRWKADPFAKGSYSFVAVGASGSDYDTLGLPVKDDKDIPRLF 617 (661)
Q Consensus 555 ~~~~~~--------------~fg~~~--~~-~p~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~la~p~~~~~~~~rl~ 617 (661)
.++.++ +|+... +. .+..+.+++|..|||++|+|+++.|+........+.+|. +|||
T Consensus 380 ~~~~~~~~~~~~~~l~~L~~~~g~~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~------~~l~ 453 (498)
T 2iid_A 380 FFQALDFKDCADIVFNDLSLIHQLPKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQ------GRIY 453 (498)
T ss_dssp TTTTSCHHHHHHHHHHHHHHHHTCCHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCB------TTEE
T ss_pred hhhcCCHHHHHHHHHHHHHHHcCCChhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCC------CcEE
Confidence 665544 565211 00 012478899999999999999999887655556777775 7999
Q ss_pred EecccccCcCCcchhHHHHHHHHHHHHHHHHhh
Q psy6038 618 FAGEHTIRNYPATVHGAFLSGLKEGGHIVDQIL 650 (661)
Q Consensus 618 FAGe~t~~~~~gtv~GA~~SG~raA~~i~~~~~ 650 (661)
||||+|+.. +||||||++||+|||++|++.+.
T Consensus 454 fAGe~t~~~-~g~~~GAi~SG~raA~~i~~~l~ 485 (498)
T 2iid_A 454 FAGEYTAQA-HGWIDSTIKSGLRAARDVNLASE 485 (498)
T ss_dssp ECSGGGSSS-SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcccccC-CcCHHHHHHHHHHHHHHHHHHhc
Confidence 999999864 59999999999999999999885
No 11
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=100.00 E-value=3e-39 Score=358.74 Aligned_cols=232 Identities=19% Similarity=0.344 Sum_probs=181.0
Q ss_pred cCCceeeccchhHHHHHHhccC---ceeeCceEEEEEecCCceEEEEeCCCCCCCCeEEEeCEEEEccChhhhhhcCCCC
Q psy6038 399 TGSHLTVKKGYACVPTALAEGL---DVHFNSSVTEIHYNSKGVTVKTVDPKTGQNETVYTGDRVLCTLPLGILKACIQPP 475 (661)
Q Consensus 399 ~g~~~~v~gG~~~L~~aLa~~L---~I~lnt~V~~I~~~~~gv~V~~~~~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~~ 475 (661)
.+..++++||+++|+++|++.+ +|++|++|++|.+++++|.|++.++ +..++++||+||+|+|+.+|+.
T Consensus 228 ~~~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g---~~~~~~~ad~vI~a~p~~~l~~----- 299 (489)
T 2jae_A 228 AMMMFTPVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAG---GSKKSITADYAICTIPPHLVGR----- 299 (489)
T ss_dssp SSSEEEETTCTTHHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEET---TEEEEEEESEEEECSCHHHHTT-----
T ss_pred CccEEeecCCHHHHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecC---CeEEEEECCEEEECCCHHHHHh-----
Confidence 3457889999999999999876 4999999999999999998887651 0116899999999999999988
Q ss_pred CccccCCCCCHHHHHHHHHcCCccccEEEEEccccccccCCCceeeeccCCCCCCceEEEEecC----CCcEEE-EEecc
Q psy6038 476 KDVLFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGSTTASRGELFLFWNLY----QAPVLL-ALVAG 550 (661)
Q Consensus 476 ~~i~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~~~~~~g~~~~~~~~~----~~~vL~-~~~~g 550 (661)
+.| +||+.+.+++++++|+++.||++.|+++||+.....+|..... .......+++.. ..++|+ +|+.|
T Consensus 300 --l~~--~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~--~~~~~~~~~~s~~~~~~~~~l~~~~~~g 373 (489)
T 2jae_A 300 --LQN--NLPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNT--DKDISQIMFPYDHYNSDRGVVVAYYSSG 373 (489)
T ss_dssp --SEE--CCCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEE--SSTTCEEECCSSSTTSSCEEEEEEEEET
T ss_pred --Ccc--CCCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccC--CCCceEEEeCCCCCCCCCCEEEEEeeCC
Confidence 666 8999999999999999999999999999998765566544221 112223333321 234666 48888
Q ss_pred chhhhhhccc--------------CCCCCCCCCCceEEEecCCCCCCCCcccCccC------CCCCCcchhhhcCCCCCC
Q psy6038 551 EAASILEDVS--------------IFPTNTVPQPKETVVTRWKADPFAKGSYSFVA------VGASGSDYDTLGLPVKDD 610 (661)
Q Consensus 551 ~~a~~~~~~~--------------~fg~~~~~~p~~~~~~~W~~dp~~~Gsys~~~------~g~~~~~~~~la~p~~~~ 610 (661)
..+..++.++ +|+......|.....++|..+||++|+|+++. ||.....++.+.+|.
T Consensus 374 ~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~--- 450 (489)
T 2jae_A 374 KRQEAFESLTHRQRLAKAIAEGSEIHGEKYTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPV--- 450 (489)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHHHCGGGGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCB---
T ss_pred chhhhhhcCCHHHHHHHHHHHHHHHcCcchhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCC---
Confidence 8776665544 66642235677888999999999999999876 777666677787775
Q ss_pred CCCCcEEEecccccCcCCcchhHHHHHHHHHHHHHHHHhhc
Q psy6038 611 KDIPRLFFAGEHTIRNYPATVHGAFLSGLKEGGHIVDQILG 651 (661)
Q Consensus 611 ~~~~rl~FAGe~t~~~~~gtv~GA~~SG~raA~~i~~~~~g 651 (661)
++||||||+|+. +.++|+||+.||.|||++|++.+..
T Consensus 451 ---~~l~faG~~~~~-~~~~v~gAi~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 451 ---DKIYFAGDHLSN-AIAWQHGALTSARDVVTHIHERVAQ 487 (489)
T ss_dssp ---TTEEECSGGGBS-STTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---CcEEEeEHHhcc-CccHHHHHHHHHHHHHHHHHHHHhh
Confidence 799999999985 7899999999999999999988753
No 12
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=100.00 E-value=1.3e-36 Score=343.13 Aligned_cols=243 Identities=13% Similarity=0.082 Sum_probs=170.0
Q ss_pred CCceeeccchhHHHHHHhccC----ceeeCceEE--EEEecCCc-------eEEEEeCCCCCCCCe--EEEeCEEEEccC
Q psy6038 400 GSHLTVKKGYACVPTALAEGL----DVHFNSSVT--EIHYNSKG-------VTVKTVDPKTGQNET--VYTGDRVLCTLP 464 (661)
Q Consensus 400 g~~~~v~gG~~~L~~aLa~~L----~I~lnt~V~--~I~~~~~g-------v~V~~~~~~~~~~g~--~i~AD~VV~TvP 464 (661)
+..+++.||+++|+++|++.+ .|++|++|+ +|.+++++ |+|++... |+ +++||+||||+|
T Consensus 337 ~~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~-----G~~~~~~aD~VIvTvP 411 (721)
T 3ayj_A 337 NEYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYDSH-----NAVHSEAYDFVILAVP 411 (721)
T ss_dssp CEECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETT-----CCEEEEEESEEEECSC
T ss_pred cceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEecC-----CceEEEEcCEEEECCC
Confidence 346789999999999999876 599999999 99997665 77755431 44 899999999999
Q ss_pred hhhhhhcCCCCCccc-------c--------------CCC-C-C-------HHHHHHHHHcCCccccEEEEEc-----cc
Q psy6038 465 LGILKACIQPPKDVL-------F--------------NPP-L-P-------DWKVKSIRRLGYGLLNKVVLCF-----DK 509 (661)
Q Consensus 465 ~~vL~~~~~~~~~i~-------f--------------~P~-L-p-------~~k~~ai~~l~~g~~~Kv~l~f-----~~ 509 (661)
+++|+..+.. ..|. | .|| | | ..+.+||++++|+..+||++.| ++
T Consensus 412 ~~~L~~~~~r-~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~ 490 (721)
T 3ayj_A 412 HDQLTPIVSR-SGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQ 490 (721)
T ss_dssp HHHHHHHHSS-SCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGS
T ss_pred HHHHhhcccc-ccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCC
Confidence 9999520000 1144 3 455 6 9 9999999999999999999999 99
Q ss_pred cccccCCC-ceeeeccCCCCCCceEEEE-----ec--CCCc-EEEEEeccchhhhh------hccc--------------
Q psy6038 510 IFWDPAEN-LFGHVGSTTASRGELFLFW-----NL--YQAP-VLLALVAGEAASIL------EDVS-------------- 560 (661)
Q Consensus 510 ~fW~~~~~-~~g~~~~~~~~~g~~~~~~-----~~--~~~~-vL~~~~~g~~a~~~------~~~~-------------- 560 (661)
|||++... ..+.+.++...+. ++.+. +. .+.. +|++|++|+.|..+ ..++
T Consensus 491 ~fW~~~~g~~i~~s~TD~~~r~-~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~ 569 (721)
T 3ayj_A 491 PWVPQWRGEPIKAVVSDSGLAA-SYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRT 569 (721)
T ss_dssp TTSCEETTEECCEEEETTTTEE-EEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHH
T ss_pred CcccccCCCCceeeecCCCcce-EEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHH
Confidence 99987622 2233333333222 22221 11 1222 67789999988776 1111
Q ss_pred ---------CCCCCC------------CCCCceEEEecCCCCCCCCcccCccCCCCCC--cchhhhcCCCCCCCCCCcEE
Q psy6038 561 ---------IFPTNT------------VPQPKETVVTRWKADPFAKGSYSFVAVGASG--SDYDTLGLPVKDDKDIPRLF 617 (661)
Q Consensus 561 ---------~fg~~~------------~~~p~~~~~~~W~~dp~~~Gsys~~~~g~~~--~~~~~la~p~~~~~~~~rl~ 617 (661)
+|+... ...+.+++..+|..|| +.|+|..+.||+.. ..+..+......+.+.+|||
T Consensus 570 ~l~~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~ 648 (721)
T 3ayj_A 570 MVNRAYRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFF 648 (721)
T ss_dssp HHHHTCCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGST-TSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEE
T ss_pred HHHHHhhhccCccccccccchhhhhhhhcccCceEEEeCCCCC-CCCccccCCCccchhhhhhhhhhhhccccCCCCCEE
Confidence 343211 0113567999999999 99999999999821 01111110000123459999
Q ss_pred EecccccCcCCcchhHHHHHHHHHHHHHHHHhhc
Q psy6038 618 FAGEHTIRNYPATVHGAFLSGLKEGGHIVDQILG 651 (661)
Q Consensus 618 FAGe~t~~~~~gtv~GA~~SG~raA~~i~~~~~g 651 (661)
|||||++. ++||||||++||+|||.+|+..+.+
T Consensus 649 fAGe~~S~-~~GWieGAl~Sa~~Aa~~i~~~~~~ 681 (721)
T 3ayj_A 649 IASDSYSH-LGGWLEGAFMSALNAVAGLIVRANR 681 (721)
T ss_dssp ECSGGGSS-CTTSHHHHHHHHHHHHHHHHHHHTT
T ss_pred Eeehhhcc-CCceehHHHHHHHHHHHHHHHHhcC
Confidence 99999984 7999999999999999999999875
No 13
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=5.5e-34 Score=315.43 Aligned_cols=428 Identities=18% Similarity=0.194 Sum_probs=246.3
Q ss_pred CCCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCccccccccEEEeCCCCChhhHHHHhhChhh
Q psy6038 135 PVKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSNYVADLGAMVVTGLGGNPINILARQINMEL 214 (661)
Q Consensus 135 ~~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~~~~d~G~~~i~~~~~~~~~~l~~~lgl~~ 214 (661)
+....++|+|||||++||+||+.|+++|++|+|||+++++|||+.|++.+|..+|.|++++.+. ...+..+++++|++.
T Consensus 12 ~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~-~~~~~~~~~~~gl~~ 90 (478)
T 2ivd_A 12 PRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDR-EPATRALAAALNLEG 90 (478)
T ss_dssp -----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETT-CHHHHHHHHHTTCGG
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhh-hHHHHHHHHHcCCcc
Confidence 3456789999999999999999999999999999999999999999999999999999999864 456778999999864
Q ss_pred hhhc----CCCcEEecCCCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHHH
Q psy6038 215 LKIG----HQCPLYQSSAENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRMN 290 (661)
Q Consensus 215 ~~~~----~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~~ 290 (661)
.... ....++..+|. ...+|.+...+ +.. ...+. .+.
T Consensus 91 ~~~~~~~~~~~~~~~~~g~---~~~~p~~~~~~--------------~~~---------~~~~~----~~~--------- 131 (478)
T 2ivd_A 91 RIRAADPAAKRRYVYTRGR---LRSVPASPPAF--------------LAS---------DILPL----GAR--------- 131 (478)
T ss_dssp GEECSCSSCCCEEEEETTE---EEECCCSHHHH--------------HTC---------SSSCH----HHH---------
T ss_pred eeeecCccccceEEEECCE---EEECCCCHHHh--------------ccC---------CCCCH----HHH---------
Confidence 3221 12334444554 11233322111 000 00000 000
Q ss_pred HHHHHhhhhhhhhccCCCCCchhHHHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHHHHHH
Q psy6038 291 EILVQLDTLDQTLQNVPIDNTTAVEFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQLLDWH 370 (661)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ll~~~ 370 (661)
.+.+....... ....++....+|+.+....... + ..+...+......++..+........+..+
T Consensus 132 --~~~~~~~~~~~-~~~~~~~s~~~~l~~~~~~~~~---~---------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~- 195 (478)
T 2ivd_A 132 --LRVAGELFSRR-APEGVDESLAAFGRRHLGHRAT---Q---------VLLDAVQTGIYAGDVEQLSVAATFPMLVKM- 195 (478)
T ss_dssp --HHHHGGGGCCC-CCTTCCCBHHHHHHHHTCHHHH---H---------HTHHHHHHHHHCCCTTTBBHHHHCHHHHHH-
T ss_pred --HHHhhhhhcCC-CCCCCCCCHHHHHHHhhCHHHH---H---------HHHHHHhceeecCCHHHhhHHHHhHHHHHH-
Confidence 00000000000 0001112224444332211110 0 011122222223322222110000000000
Q ss_pred HhhhhhhcCCCCcccc------ccCCC-CCCCccccCCceeeccchhHHHHHHhccC--ceeeCceEEEEEecCCceEEE
Q psy6038 371 FANLEFANATPLASLS------LKHWD-QDDDFEFTGSHLTVKKGYACVPTALAEGL--DVHFNSSVTEIHYNSKGVTVK 441 (661)
Q Consensus 371 ~~~le~~~~~~l~~ls------l~~~~-~~~~~~~~g~~~~v~gG~~~L~~aLa~~L--~I~lnt~V~~I~~~~~gv~V~ 441 (661)
+...+.-+..+. ..... ....+.+.+..+++++|+++|+++|++.+ +|++|++|++|..+++++.|+
T Consensus 196 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~~v~ 271 (478)
T 2ivd_A 196 ----EREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLIDALAASLGDAAHVGARVEGLAREDGGWRLI 271 (478)
T ss_dssp ----HHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHHHHHHHHHHHGGGEESSEEEEEEECC--CCEEE
T ss_pred ----HHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHHHHHHHHHHhhhhEEcCCEEEEEEecCCeEEEE
Confidence 000000000000 00000 00011122567889999999999999877 899999999999988888887
Q ss_pred EeCCCCCCCCeEEEeCEEEEccChhhhhhcCCCCCccccCCCCCHHHHHHHHHcCCccccEEEEEccccccccCCCceee
Q psy6038 442 TVDPKTGQNETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGH 521 (661)
Q Consensus 442 ~~~~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~ 521 (661)
+.+. .+|++++||+||+|+|+.++++ +.|+||+.+.++++++.++++.||++.|+++||+.. ..+|.
T Consensus 272 ~~~~---~~g~~~~ad~vV~a~~~~~~~~---------ll~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~-~~~~~ 338 (478)
T 2ivd_A 272 IEEH---GRRAELSVAQVVLAAPAHATAK---------LLRPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAP-DGFGF 338 (478)
T ss_dssp EEET---TEEEEEECSEEEECSCHHHHHH---------HHTTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCC-CSSEE
T ss_pred Eeec---CCCceEEcCEEEECCCHHHHHH---------HhhccCHHHHHHHhcCCCCcEEEEEEEEccccCCCC-CceEE
Confidence 7210 0167899999999999999988 338899999999999999999999999999999863 34555
Q ss_pred eccCCCCCCceEEEEec--------CCCcEEEEEeccchhhhhhccc--------------CCCCCCCCCCceEEEecCC
Q psy6038 522 VGSTTASRGELFLFWNL--------YQAPVLLALVAGEAASILEDVS--------------IFPTNTVPQPKETVVTRWK 579 (661)
Q Consensus 522 ~~~~~~~~g~~~~~~~~--------~~~~vL~~~~~g~~a~~~~~~~--------------~fg~~~~~~p~~~~~~~W~ 579 (661)
+.+..........+|+. .+..+|++++.+..+..+..++ +|+.. ..|....+++|.
T Consensus 339 ~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~p~~~~~~~w~ 416 (478)
T 2ivd_A 339 LVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREELKALAGVT--ARPSFTRVFRWP 416 (478)
T ss_dssp ECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCC--SCCSEEEEEEES
T ss_pred EecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCC--CCCcEEEEEECC
Confidence 43221222223333332 1234777888776554333322 67653 467888899996
Q ss_pred CCCCCCcccCccCCCCCCcchhhhcCCCCCCCCCCcEEEecccccCcCCcchhHHHHHHHHHHHHHHHHhh
Q psy6038 580 ADPFAKGSYSFVAVGASGSDYDTLGLPVKDDKDIPRLFFAGEHTIRNYPATVHGAFLSGLKEGGHIVDQIL 650 (661)
Q Consensus 580 ~dp~~~Gsys~~~~g~~~~~~~~la~p~~~~~~~~rl~FAGe~t~~~~~gtv~GA~~SG~raA~~i~~~~~ 650 (661)
. +|+.+.+|... ....+..++. . .++|||||+++. . ++|+||+.||.++|++|+..+.
T Consensus 417 ~------~~p~~~~g~~~-~~~~~~~~~~--~-~~~l~~aG~~~~--g-~gv~gA~~SG~~aA~~i~~~l~ 474 (478)
T 2ivd_A 417 L------GIPQYNLGHLE-RVAAIDAALQ--R-LPGLHLIGNAYK--G-VGLNDCIRNAAQLADALVAGNT 474 (478)
T ss_dssp S------CCBCCBTTHHH-HHHHHHHHHH--T-STTEEECSTTTS--C-CSHHHHHHHHHHHHHHHCC---
T ss_pred C------cccCCCcCHHH-HHHHHHHHHh--h-CCCEEEEccCCC--C-CCHHHHHHHHHHHHHHHHHhhc
Confidence 4 35444555421 1222222221 0 279999999984 2 3599999999999999987663
No 14
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=9.4e-34 Score=312.47 Aligned_cols=425 Identities=18% Similarity=0.229 Sum_probs=247.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCC------CcEEEEcCCCCCCCceeccCCCccccccccEEEeCCCCChhhHHHHhhCh
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFG------IEVVVLEARERVGGRIVTFKKSNYVADLGAMVVTGLGGNPINILARQINM 212 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g------~~v~v~e~~~~~GG~i~t~~~~~~~~d~G~~~i~~~~~~~~~~l~~~lgl 212 (661)
.++|+|||||++||+||++|+++| ++|+|||+++++||++.|.+.++..+|.|++++.+.. ..+..+.+++|+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~-~~~~~l~~~lgl 83 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERK-KSAPQLVKDLGL 83 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTC-THHHHHHHHTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCC-HHHHHHHHHcCC
Confidence 479999999999999999999999 9999999999999999999999999999999887653 457788999998
Q ss_pred hhhhhc--CCCcEEecCCCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHHH
Q psy6038 213 ELLKIG--HQCPLYQSSAENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRMN 290 (661)
Q Consensus 213 ~~~~~~--~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~~ 290 (661)
+..... ....++..+|.. ..++..........+..++. ...+ ....++.
T Consensus 84 ~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~p~~~~~~~~-~~~~-------------------------~~~~~~~ 134 (470)
T 3i6d_A 84 EHLLVNNATGQSYVLVNRTL---HPMPKGAVMGIPTKIAPFVS-TGLF-------------------------SLSGKAR 134 (470)
T ss_dssp CTTEEECCCCCEEEECSSCE---EECCC-----------------------------------------------CCSHH
T ss_pred cceeecCCCCccEEEECCEE---EECCCCcccCCcCchHHhhc-cCcC-------------------------CHHHHHH
Confidence 754332 223344444541 12222110000000000000 0000 0000000
Q ss_pred HHHHHhhhhhhhhccCCCCCchhHHHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHHHHHH
Q psy6038 291 EILVQLDTLDQTLQNVPIDNTTAVEFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQLLDWH 370 (661)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ll~~~ 370 (661)
...+.+. . ...........+|+.+........ ..+...+..+...++..+..... +. .
T Consensus 135 ~~~~~~~---~--~~~~~~~~s~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~s~~~~----~~-~ 192 (470)
T 3i6d_A 135 AAMDFIL---P--ASKTKDDQSLGEFFRRRVGDEVVE------------NLIEPLLSGIYAGDIDKLSLMST----FP-Q 192 (470)
T ss_dssp HHHHHHS---C--CCSSSSCCBHHHHHHHHSCHHHHH------------HTHHHHHHHTTCSCTTTBBHHHH----CG-G
T ss_pred HhcCccc---C--CCCCCCCcCHHHHHHHhcCHHHHH------------HhccchhcEEecCCHHHhhHHHH----HH-H
Confidence 0011000 0 000111122244443322111110 01122222233222222111000 00 0
Q ss_pred HhhhhhhcCCCCccccccC---CCCCCCccccCCceeeccchhHHHHHHhccC---ceeeCceEEEEEecCCceEEEEeC
Q psy6038 371 FANLEFANATPLASLSLKH---WDQDDDFEFTGSHLTVKKGYACVPTALAEGL---DVHFNSSVTEIHYNSKGVTVKTVD 444 (661)
Q Consensus 371 ~~~le~~~~~~l~~lsl~~---~~~~~~~~~~g~~~~v~gG~~~L~~aLa~~L---~I~lnt~V~~I~~~~~gv~V~~~~ 444 (661)
+..++...+.-...+.... -.........+..+.+++|++.|+++|++.+ +|++|++|++|+.+++++.|++.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~ 272 (470)
T 3i6d_A 193 FYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDN 272 (470)
T ss_dssp GCC-------------------------------EEEETTCTHHHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESS
T ss_pred HHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECC
Confidence 0000000000000000000 0000000113456789999999999999988 799999999999998898888865
Q ss_pred CCCCCCCeEEEeCEEEEccChhhhhhcCCCCCccccCCCCCHHHHHHHHHcCCccccEEEEEccccccccCCCceeeecc
Q psy6038 445 PKTGQNETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGS 524 (661)
Q Consensus 445 ~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~ 524 (661)
|++++||+||+|+|+.++++ +.+.|++ .+++++++|+++.||++.|+++||+.....+|.+.+
T Consensus 273 ------g~~~~ad~vi~a~p~~~~~~-------l~~~~~~----~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~ 335 (470)
T 3i6d_A 273 ------GVTLDADSVIVTAPHKAAAG-------MLSELPA----ISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVIS 335 (470)
T ss_dssp ------SCEEEESEEEECSCHHHHHH-------HTTTSTT----HHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEEC
T ss_pred ------CCEEECCEEEECCCHHHHHH-------HcCCchh----hHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEcc
Confidence 77899999999999999998 6566543 578999999999999999999999876566777654
Q ss_pred CCCCCCceEEEEec--------CCCcEEEEEeccchhhhhhccc--------------CCCCCCCCCCceEEEecCCCCC
Q psy6038 525 TTASRGELFLFWNL--------YQAPVLLALVAGEAASILEDVS--------------IFPTNTVPQPKETVVTRWKADP 582 (661)
Q Consensus 525 ~~~~~g~~~~~~~~--------~~~~vL~~~~~g~~a~~~~~~~--------------~fg~~~~~~p~~~~~~~W~~dp 582 (661)
...........|.. .+..+|.+++.+..+..+..++ +||. .++|....+++|..
T Consensus 336 ~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~--~~~p~~~~~~~w~~-- 411 (470)
T 3i6d_A 336 RNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNI--NGEPEMTCVTRWHE-- 411 (470)
T ss_dssp STTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCC--CSCCSEEEEEEEEE--
T ss_pred CCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhCC--CCCceEEEEEEcCC--
Confidence 33222222223321 1345788888766654443333 7775 35788999999964
Q ss_pred CCCcccCccCCCCCC---cchhhhcCCCCCCCCCCcEEEecccccCcCCcchhHHHHHHHHHHHHHHHHh
Q psy6038 583 FAKGSYSFVAVGASG---SDYDTLGLPVKDDKDIPRLFFAGEHTIRNYPATVHGAFLSGLKEGGHIVDQI 649 (661)
Q Consensus 583 ~~~Gsys~~~~g~~~---~~~~~la~p~~~~~~~~rl~FAGe~t~~~~~gtv~GA~~SG~raA~~i~~~~ 649 (661)
++..+.+|... ...+.+.+|. ++|||||+++.. .+|+||+.||.++|++|++.+
T Consensus 412 ----a~p~~~~g~~~~~~~~~~~l~~~~------~~l~~aG~~~~g---~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 412 ----SMPQYHVGHKQRIKELREALASAY------PGVYMTGASFEG---VGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp ----EEEECBTTHHHHHHHHHHHHHHHS------TTEEECSTTTSC---CSHHHHHHHHHHHHHHHHHHH
T ss_pred ----ccCCCCCCHHHHHHHHHHHHHhhC------CCEEEEeecCCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 33333444321 1223454554 689999999853 359999999999999999876
No 15
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=2.2e-32 Score=304.60 Aligned_cols=428 Identities=20% Similarity=0.273 Sum_probs=243.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCccccccccEEEeCCCCChhhHHHHhhChhhhhh
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSNYVADLGAMVVTGLGGNPINILARQINMELLKI 217 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~~~~d~G~~~i~~~~~~~~~~l~~~lgl~~~~~ 217 (661)
+.++|+|||||++||+||+.|+++|++|+|||+++++||++.|++.+|+.+|.|++++++. ...+..+++++|+.....
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~-~~~~~~~~~~lgl~~~~~ 90 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTES-EGDVTFLIDSLGLREKQQ 90 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCC-SHHHHHHHHHTTCGGGEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccC-cHHHHHHHHHcCCcccce
Confidence 3579999999999999999999999999999999999999999999999999999998754 345778999999865422
Q ss_pred c---CCCcEEecCCCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy6038 218 G---HQCPLYQSSAENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRMNEILV 294 (661)
Q Consensus 218 ~---~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~~~~~~ 294 (661)
. ....++..+|. .+.+|.+...+... .+ .+. .+.+......+ ..
T Consensus 91 ~~~~~~~~~~~~~g~---~~~~p~~~~~~~~~---------~~--------------~~~----~~~~~~~~~~~---~~ 137 (504)
T 1sez_A 91 FPLSQNKRYIARNGT---PVLLPSNPIDLIKS---------NF--------------LST----GSKLQMLLEPI---LW 137 (504)
T ss_dssp CCSSCCCEEEESSSS---EEECCSSHHHHHHS---------SS--------------SCH----HHHHHHHTHHH---HC
T ss_pred eccCCCceEEEECCe---EEECCCCHHHHhcc---------cc--------------CCH----HHHHHHhHhhh---cc
Confidence 1 11234455665 11233332111000 00 000 00000000000 00
Q ss_pred HhhhhhhhhccCCCCCchhHHHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHHHHHHHhhh
Q psy6038 295 QLDTLDQTLQNVPIDNTTAVEFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQLLDWHFANL 374 (661)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ll~~~~~~l 374 (661)
.. ..... .........+|+.+....... +. .+...+......++..+.+......+. .+
T Consensus 138 ~~---~~~~~-~~~~~~s~~~~l~~~~~~~~~---~~---------~~~~~~~~~~~~~~~~~s~~~~~~~~~-----~~ 196 (504)
T 1sez_A 138 KN---KKLSQ-VSDSHESVSGFFQRHFGKEVV---DY---------LIDPFVAGTCGGDPDSLSMHHSFPELW-----NL 196 (504)
T ss_dssp --------------CCCBHHHHHHHHHCHHHH---HT---------THHHHHHHHHSCCGGGSBHHHHCHHHH-----HH
T ss_pred Cc---ccccc-cCCCCccHHHHHHHHcCHHHH---HH---------HHHHHHccccCCChHHhhHHHHhHHHH-----HH
Confidence 00 00000 001112224454433222111 00 011122222222222211100000000 00
Q ss_pred hhhcCCCCc-----cccccCCCC------CCCccccCCceeeccchhHHHHHHhccC---ceeeCceEEEEEecCCc---
Q psy6038 375 EFANATPLA-----SLSLKHWDQ------DDDFEFTGSHLTVKKGYACVPTALAEGL---DVHFNSSVTEIHYNSKG--- 437 (661)
Q Consensus 375 e~~~~~~l~-----~lsl~~~~~------~~~~~~~g~~~~v~gG~~~L~~aLa~~L---~I~lnt~V~~I~~~~~g--- 437 (661)
+...+..+. .++.....+ ..........++++||+++|+++|++.+ +|++|++|++|.+++++
T Consensus 197 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~ 276 (504)
T 1sez_A 197 EKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSA 276 (504)
T ss_dssp HHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTHHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSS
T ss_pred HHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHHHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcc
Confidence 100000000 000000000 0000112346789999999999999977 59999999999998887
Q ss_pred ---eEEEEeCCCCCCCC---eEEEeCEEEEccChhhhhhcCCCCCcccc---CCCCCHHHHHHHHHcCCccccEEEEEcc
Q psy6038 438 ---VTVKTVDPKTGQNE---TVYTGDRVLCTLPLGILKACIQPPKDVLF---NPPLPDWKVKSIRRLGYGLLNKVVLCFD 508 (661)
Q Consensus 438 ---v~V~~~~~~~~~~g---~~i~AD~VV~TvP~~vL~~~~~~~~~i~f---~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~ 508 (661)
+.|++.+ .+| ++++||+||+|+|+.++++ +.+ .+++++.+ ++++.++++.||++.|+
T Consensus 277 ~~~~~v~~~~----~~g~~~~~~~ad~VI~a~p~~~l~~-------ll~~~~~~~~~~~~---l~~~~~~~~~~v~l~~~ 342 (504)
T 1sez_A 277 IDSWSIISAS----PHKRQSEEESFDAVIMTAPLCDVKS-------MKIAKRGNPFLLNF---IPEVDYVPLSVVITTFK 342 (504)
T ss_dssp SCEEEEEEBC----SSSSCBCCCEESEEEECSCHHHHHT-------SEEESSSSBCCCTT---SCCCCEEEEEEEEEEEE
T ss_pred cceEEEEEcC----CCCccceeEECCEEEECCCHHHHHH-------HhhcccCCcccHHH---HhcCCCCceEEEEEEEc
Confidence 6676643 124 6789999999999999998 443 23455432 67789999999999999
Q ss_pred ccccccCCCceeeeccCCCCC---CceE-EE----Eec---CCCcEEEEEeccchhhhhhccc--------------CCC
Q psy6038 509 KIFWDPAENLFGHVGSTTASR---GELF-LF----WNL---YQAPVLLALVAGEAASILEDVS--------------IFP 563 (661)
Q Consensus 509 ~~fW~~~~~~~g~~~~~~~~~---g~~~-~~----~~~---~~~~vL~~~~~g~~a~~~~~~~--------------~fg 563 (661)
++||+.....||.+.+..... .... .+ ++. .+..+|++|+.|..+..+..++ +|+
T Consensus 343 ~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g 422 (504)
T 1sez_A 343 RENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLG 422 (504)
T ss_dssp GGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHC
T ss_pred hhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhC
Confidence 999986544556554322110 1111 11 221 1334788898887665544433 666
Q ss_pred CCCCCCCceEEEecCCCCCCCCcccCccCCCCCC--cchhhhcCCCCCCCCCCcEEEecccccCcCCcchhHHHHHHHHH
Q psy6038 564 TNTVPQPKETVVTRWKADPFAKGSYSFVAVGASG--SDYDTLGLPVKDDKDIPRLFFAGEHTIRNYPATVHGAFLSGLKE 641 (661)
Q Consensus 564 ~~~~~~p~~~~~~~W~~dp~~~Gsys~~~~g~~~--~~~~~la~p~~~~~~~~rl~FAGe~t~~~~~gtv~GA~~SG~ra 641 (661)
.. .+|..+.+++|..+ |..+.+|... ..+..+.+|+ ++|||||++++ .++|+||+.||.||
T Consensus 423 ~~--~~p~~~~~~~w~~~------~p~~~~g~~~~~~~~~~~~~~~------~~l~~aG~~~~---g~~v~gai~sG~~a 485 (504)
T 1sez_A 423 AE--GEPTYVNHLYWSKA------FPLYGHNYDSVLDAIDKMEKNL------PGLFYAGNHRG---GLSVGKALSSGCNA 485 (504)
T ss_dssp BC--SCCSSEEEEEEEEE------EECCCTTHHHHHHHHHHHHHHS------TTEEECCSSSS---CSSHHHHHHHHHHH
T ss_pred CC--CCCeEEEEeECCCC------CCccCcCHHHHHHHHHHHHHhC------CCEEEEeecCC---CCCHHHHHHHHHHH
Confidence 53 46888999999753 3333333211 1112233343 68999999996 36899999999999
Q ss_pred HHHHHHHhhc
Q psy6038 642 GGHIVDQILG 651 (661)
Q Consensus 642 A~~i~~~~~g 651 (661)
|++|++.+..
T Consensus 486 A~~il~~l~~ 495 (504)
T 1sez_A 486 ADLVISYLES 495 (504)
T ss_dssp HHHHHHHHSS
T ss_pred HHHHHHHHhh
Confidence 9999998754
No 16
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.98 E-value=3.3e-31 Score=292.93 Aligned_cols=427 Identities=17% Similarity=0.185 Sum_probs=249.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHCC--CcEEEEcCCCCCCCceeccCCCccccccccEEEeCCCCChhhHHHHhhChhhhh
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFG--IEVVVLEARERVGGRIVTFKKSNYVADLGAMVVTGLGGNPINILARQINMELLK 216 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g--~~v~v~e~~~~~GG~i~t~~~~~~~~d~G~~~i~~~~~~~~~~l~~~lgl~~~~ 216 (661)
.++|+|||||++||+||++|++.| ++|+|||+++++||++.+.+.+|+.+|.|++++.... ..+..+.+++|++...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~-~~~~~l~~~lg~~~~~ 82 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARK-HILTDLIEAIGLGEKL 82 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTS-THHHHHHHHTTCGGGE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhccc-HHHHHHHHHcCCcceE
Confidence 479999999999999999999999 9999999999999999999999999999999987653 4577889999987654
Q ss_pred hc--CCCcEEecCCCCCCCCcCCCchh-hHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHHHHHH
Q psy6038 217 IG--HQCPLYQSSAENSDNLQVPKDKD-DLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRMNEIL 293 (661)
Q Consensus 217 ~~--~~~~~~~~~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~~~~~ 293 (661)
.. ....++..+|.. ..+|.... ..+. .+. .++. ...++. .. ++ .+.
T Consensus 83 ~~~~~~~~~~~~~g~~---~~~p~~~~~~~p~-~~~------~~~~---------~~~~~~----~~-------~~-~~~ 131 (475)
T 3lov_A 83 VRNNTSQAFILDTGGL---HPIPKGAVMGIPT-DLD------LFRQ---------TTLLTE----EE-------KQ-EVA 131 (475)
T ss_dssp EECCCCCEEEEETTEE---EECCSSEETTEES-CHH------HHTT---------CSSSCH----HH-------HH-HHH
T ss_pred eecCCCceEEEECCEE---EECCCcccccCcC-chH------HHhh---------ccCCCh----hH-------HH-Hhh
Confidence 32 122333344431 12221100 0000 000 0000 000000 00 00 000
Q ss_pred HHhhhhhhhhccCCCCCchhHHHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHHHHHHHhh
Q psy6038 294 VQLDTLDQTLQNVPIDNTTAVEFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQLLDWHFAN 373 (661)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ll~~~~~~ 373 (661)
+........ ......+....+|+.+.....+. ...+...+......++..+........+..+.
T Consensus 132 ~~~~~~~~~-~~~~~~~~s~~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~--- 195 (475)
T 3lov_A 132 DLLLHPSDS-LRIPEQDIPLGEYLRPRLGDALV------------EKLIEPLLSGIYAGNIDQMSTFATYPQFVANE--- 195 (475)
T ss_dssp HHHHSCCTT-CCCCSSCCBHHHHHHHHHCHHHH------------HHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHH---
T ss_pred CcccCCccc-ccCCCCCcCHHHHHHHHhCHHHH------------HHHHHHHhceeecCChHHcCHHHHHHHHHHHH---
Confidence 000000000 00011122234554432221111 11122333344444433332221111111100
Q ss_pred hhhhcCCCCccccccC----C--CCCCCccccCCceeeccchhHHHHHHhccC---ceeeCceEEEEEecCCceEEEEeC
Q psy6038 374 LEFANATPLASLSLKH----W--DQDDDFEFTGSHLTVKKGYACVPTALAEGL---DVHFNSSVTEIHYNSKGVTVKTVD 444 (661)
Q Consensus 374 le~~~~~~l~~lsl~~----~--~~~~~~~~~g~~~~v~gG~~~L~~aLa~~L---~I~lnt~V~~I~~~~~gv~V~~~~ 444 (661)
...+.-...+.... - .........+..+++++|+++|+++|++.+ +|++|++|++|+++++++.|++.+
T Consensus 196 --~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~ 273 (475)
T 3lov_A 196 --QKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDH 273 (475)
T ss_dssp --HHHSSHHHHHHHTCC--------------CCSEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTT
T ss_pred --HhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECC
Confidence 00000000000000 0 000000113456789999999999999988 799999999999998888887754
Q ss_pred CCCCCCCeEEEeCEEEEccChhhhhhcCCCCCccccCCCCCHHHHHHHHHcCCccccEEEEEccccccccCCCceeeecc
Q psy6038 445 PKTGQNETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGS 524 (661)
Q Consensus 445 ~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~ 524 (661)
| +++||+||+|+|+.++++ +.+.|++ ++++++.|+++.||++.|+++|| ...+.+|.+.+
T Consensus 274 ------g-~~~ad~vV~a~p~~~~~~-------ll~~~~~-----~~~~~~~~~~~~~v~l~~~~~~~-~~~~g~g~l~~ 333 (475)
T 3lov_A 274 ------G-PEYADYVLLTIPHPQVVQ-------LLPDAHL-----PELEQLTTHSTATVTMIFDQQQS-LPIEGTGFVVN 333 (475)
T ss_dssp ------C-CEEESEEEECSCHHHHHH-------HCTTSCC-----HHHHTCCEEEEEEEEEEEECCSS-CSSSSSEEEEC
T ss_pred ------C-eEECCEEEECCCHHHHHH-------HcCccCH-----HHHhcCCCCeEEEEEEEECCcCC-CCCCCEEEEec
Confidence 6 799999999999999998 6666655 78899999999999999999994 33455677654
Q ss_pred CCCCCCceEEEEec-----C--CCcEEEEEeccchhhhhhccc--------------CCCCCCCCCCceEEEecCCCC--
Q psy6038 525 TTASRGELFLFWNL-----Y--QAPVLLALVAGEAASILEDVS--------------IFPTNTVPQPKETVVTRWKAD-- 581 (661)
Q Consensus 525 ~~~~~g~~~~~~~~-----~--~~~vL~~~~~g~~a~~~~~~~--------------~fg~~~~~~p~~~~~~~W~~d-- 581 (661)
...........|.. . +..+|.+++.+..+..+..++ +||.. ++|....+++|...
T Consensus 334 ~~~~~~~~~~~~~s~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~--~~p~~~~v~~w~~a~p 411 (475)
T 3lov_A 334 RRAPYSITACTAIDQKWNHSAPDHTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRT--LEPKQVIISRLMDGLP 411 (475)
T ss_dssp TTSSCSEEEEEEHHHHCTTTCTTEEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSC--CCCSEEEEEEEEEEEE
T ss_pred CCCCCceEEEEEEcccCCCCCCCcEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCC--CCCeEEEEEEcccCCC
Confidence 33222222223321 1 134677788766554444333 67753 47889999999875
Q ss_pred CCCCcccCccCCCCCCcchhhhcCCCCCCCCCCcEEEecccccCcCCcchhHHHHHHHHHHHHHHHHhhc
Q psy6038 582 PFAKGSYSFVAVGASGSDYDTLGLPVKDDKDIPRLFFAGEHTIRNYPATVHGAFLSGLKEGGHIVDQILG 651 (661)
Q Consensus 582 p~~~Gsys~~~~g~~~~~~~~la~p~~~~~~~~rl~FAGe~t~~~~~gtv~GA~~SG~raA~~i~~~~~g 651 (661)
.|..|.... .....+.+.+|+ ++|||||+++.. .+|+||+.||.++|++|++.+..
T Consensus 412 ~~~~g~~~~-----~~~~~~~l~~~~------~~l~~aG~~~~g---~g~~~a~~sG~~aA~~i~~~l~~ 467 (475)
T 3lov_A 412 AYTVGHADR-----IQRVREEVLAQY------PGIYLAGLAYDG---VGLPDCVASAKTMIESIELEQSH 467 (475)
T ss_dssp CCCTTHHHH-----HHHHHHHHHHHS------TTEEECSTTTSC---SSHHHHHHHHHHHHHHHHHTC--
T ss_pred CCCCChHHH-----HHHHHHHHHhhC------CCEEEEccCCCC---CCHHHHHHHHHHHHHHHHHHhhc
Confidence 333332110 011223454454 689999999863 35999999999999999988754
No 17
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.95 E-value=1.8e-27 Score=264.62 Aligned_cols=302 Identities=17% Similarity=0.200 Sum_probs=146.3
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCccccccccEEEeCCCCChhhHHHHhhChhhh----
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSNYVADLGAMVVTGLGGNPINILARQINMELL---- 215 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~~~~d~G~~~i~~~~~~~~~~l~~~lgl~~~---- 215 (661)
|+|||||||++||+||++|+++|++|+|||+++++|||+.|++.+|+.+|.|++++.+. ..+..+.+.+|..+.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~~~D~G~~~~~~~--~~~~~l~~~~g~~~~~~~~ 79 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVITDP--SAIEELFALAGKQLKEYVE 79 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTEEEECSCCCBSCT--HHHHHHHHTTTCCGGGTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCEEEecCceeecCc--hhHHHHHHHhcchhhhcee
Confidence 68999999999999999999999999999999999999999999999999999998654 345566666664332
Q ss_pred --hhcCCCcEEecCCCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHHHHHH
Q psy6038 216 --KIGHQCPLYQSSAENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRMNEIL 293 (661)
Q Consensus 216 --~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~~~~~ 293 (661)
+......++..+|. .+.++.+...+.. .+..+ . | ...+. +.++....
T Consensus 80 ~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~-~l~~~------~------------p-----~~~~~----~~~~~~~~ 128 (501)
T 4dgk_A 80 LLPVTPFYRLCWESGK---VFNYDNDQTRLEA-QIQQF------N------------P-----RDVEG----YRQFLDYS 128 (501)
T ss_dssp EEEESSSEEEEETTSC---EEEECSCHHHHHH-HHHHH------C------------T-----HHHHH----HHHHHHHH
T ss_pred eEecCcceEEEcCCCC---EEEeeccHHHHHH-HHhhc------C------------c-----cccch----hhhHHHHH
Confidence 12222334555665 2334444332211 11110 0 0 00001 11111111
Q ss_pred HHhhhh-hhhhccCCCCCchhHHHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHHHHHHHh
Q psy6038 294 VQLDTL-DQTLQNVPIDNTTAVEFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQLLDWHFA 372 (661)
Q Consensus 294 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ll~~~~~ 372 (661)
.++... ...... .+.....+++... .....+ ....++.+.+.. .+.++..+++++++..
T Consensus 129 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---------~~~~~l-~~~~~~~~~~~~--------~~~~~~l~~~l~~~~~ 188 (501)
T 4dgk_A 129 RAVFKEGYLKLGT--VPFLSFRDMLRAA---------PQLAKL-QAWRSVYSKVAS--------YIEDEHLRQAFSFHSL 188 (501)
T ss_dssp HHHTSSSCC--CC--CCCCCHHHHHHSG---------GGTTTS-HHHHHHHHHHHT--------TCCCHHHHHHHHHHHH
T ss_pred HHhhhhhhhhccc--cccchhhhhhhhh---------hhhhhh-hhcccHHHHHHH--------HhccHHHHhhhhhhhc
Confidence 111100 000000 0100011111100 000000 000112222221 1234445555655432
Q ss_pred hhhhhcCCCCccccccCCCCCCCccccCCceeeccchhHHHHHHhccC-----ceeeCceEEEEEecCCceE-EEEeCCC
Q psy6038 373 NLEFANATPLASLSLKHWDQDDDFEFTGSHLTVKKGYACVPTALAEGL-----DVHFNSSVTEIHYNSKGVT-VKTVDPK 446 (661)
Q Consensus 373 ~le~~~~~~l~~lsl~~~~~~~~~~~~g~~~~v~gG~~~L~~aLa~~L-----~I~lnt~V~~I~~~~~gv~-V~~~~~~ 446 (661)
.. ...+....++.... .......+.++++||+++|+++|++.+ +|++|++|++|..++++++ |++.+
T Consensus 189 ~~---g~~p~~~~~~~~~~--~~~~~~~G~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~-- 261 (501)
T 4dgk_A 189 LV---GGNPFATSSIYTLI--HALEREWGVWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLED-- 261 (501)
T ss_dssp HH---HSCC--CCCTHHHH--HHHHSCCCEEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETT--
T ss_pred cc---CCCcchhhhhhhhh--hhhhccCCeEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecC--
Confidence 21 11121111110000 001123445789999999999998744 7999999999999998877 66655
Q ss_pred CCCCCeEEEeCEEEEccChhhhhhcCCCCCccccCCCCCHHHHHHHHHcCCc-cccEEEEEccccc
Q psy6038 447 TGQNETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPLPDWKVKSIRRLGYG-LLNKVVLCFDKIF 511 (661)
Q Consensus 447 ~~~~g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~Lp~~k~~ai~~l~~g-~~~Kv~l~f~~~f 511 (661)
|+++.||+||+++++..+.. . +.-..+++....+.+++..++ ...++++.++.+.
T Consensus 262 ----g~~~~ad~VV~~a~~~~~~~-----~-Ll~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~ 317 (501)
T 4dgk_A 262 ----GRRFLTQAVASNADVVHTYR-----D-LLSQHPAAVKQSNKLQTKRMSNSLFVLYFGLNHHH 317 (501)
T ss_dssp ----SCEEECSCEEECCC---------------------------------CCEEEEEEEEESSCC
T ss_pred ----CcEEEcCEEEECCCHHHHHH-----H-hccccccchhhhhhhhccccCCceeEEEecccCCc
Confidence 89999999999998776544 1 212224566666677777764 4567888887754
No 18
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.95 E-value=3.5e-27 Score=249.24 Aligned_cols=214 Identities=15% Similarity=0.179 Sum_probs=153.4
Q ss_pred ceeeccchhHHHHHHhc--cCceeeCceEEEEEecCCceEEEEeCCCCCCCCeEEEeCEEEEccChhhhhhcCCCCCccc
Q psy6038 402 HLTVKKGYACVPTALAE--GLDVHFNSSVTEIHYNSKGVTVKTVDPKTGQNETVYTGDRVLCTLPLGILKACIQPPKDVL 479 (661)
Q Consensus 402 ~~~v~gG~~~L~~aLa~--~L~I~lnt~V~~I~~~~~gv~V~~~~~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~~~~i~ 479 (661)
.+...+|++.++++|++ +.+|+++++|++|..+++++.|++.+ |++++||+||+|+|+..+.++ .-.
T Consensus 104 ~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~------g~~~~ad~vV~A~p~~~~~~l-----l~~ 172 (342)
T 3qj4_A 104 NFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQT------GSPEQFDLIVLTMPVPEILQL-----QGD 172 (342)
T ss_dssp EEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESS------SCCEEESEEEECSCHHHHTTC-----BST
T ss_pred ceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECC------CCEEEcCEEEECCCHHHHHHH-----hcc
Confidence 46678999999999998 77999999999999998899888755 667899999999999998882 112
Q ss_pred cCCCCCHHHHHHHHHcCCccccEEEEEccccccccCCCceeeeccCCCCCCceEEEEecC--C------CcEEEEEeccc
Q psy6038 480 FNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGSTTASRGELFLFWNLY--Q------APVLLALVAGE 551 (661)
Q Consensus 480 f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~~~~~~g~~~~~~~~~--~------~~vL~~~~~g~ 551 (661)
+.|+||+.+.++++++.|+++.||++.|+++||.+. ..+|.+.+.. ....+.+++.. + .++++.++.++
T Consensus 173 ~~~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~-~~~g~~~~~~--~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~ 249 (342)
T 3qj4_A 173 ITTLISECQRQQLEAVSYSSRYALGLFYEAGTKIDV-PWAGQYITSN--PCIRFVSIDNKKRNIESSEIGPSLVIHTTVP 249 (342)
T ss_dssp HHHHSCHHHHHHHHTCCBCCEEEEEEECSSCC--CC-SCSEEECSSC--SSEEEEEEHHHHTTCCCC-CCCEEEEEECHH
T ss_pred cccccCHHHHHHHhcCCccccEEEEEEECCCCccCC-ceeeEEccCC--cceEEEEccccCCCCCCCCCCceEEEECCHH
Confidence 557899999999999999999999999999999753 3556654321 11122333321 1 24788888776
Q ss_pred hhhhhhccc--------------CCCCCCCCCCceEEEecCCCCCCCCcccCccCCCCCCcchhhhcCCCCCCCCCCcEE
Q psy6038 552 AASILEDVS--------------IFPTNTVPQPKETVVTRWKADPFAKGSYSFVAVGASGSDYDTLGLPVKDDKDIPRLF 617 (661)
Q Consensus 552 ~a~~~~~~~--------------~fg~~~~~~p~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~la~p~~~~~~~~rl~ 617 (661)
.+..+.+++ +||. .++|..+.++||.. +.=.|. . .+....+..+ ..++|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~l~~~~g~--~~~p~~~~v~rW~~---a~p~~~-----~-~~~~~~~~~~-----~~~~l~ 313 (342)
T 3qj4_A 250 FGVTYLEHSIEDVQELVFQQLENILPG--LPQPIATKCQKWRH---SQVTNA-----A-ANCPGQMTLH-----HKPFLA 313 (342)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHHHSCS--CCCCSEEEEEEETT---CSBSSC-----C-SSSCSCEEEE-----TTTEEE
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHhccC--CCCCceeeeccccc---cccccc-----c-CCCcceeEec-----CCccEE
Confidence 554443333 6773 57899999999962 221221 1 0111112101 137899
Q ss_pred EecccccCcCCcchhHHHHHHHHHHHHHHHH
Q psy6038 618 FAGEHTIRNYPATVHGAFLSGLKEGGHIVDQ 648 (661)
Q Consensus 618 FAGe~t~~~~~gtv~GA~~SG~raA~~i~~~ 648 (661)
+||+++. .++|+||+.||.++|++|++.
T Consensus 314 laGd~~~---g~~v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 314 CGGDGFT---QSNFDGCITSALCVLEALKNY 341 (342)
T ss_dssp ECSGGGS---CSSHHHHHHHHHHHHHHHTTC
T ss_pred EEccccC---CCCccHHHHHHHHHHHHHHhh
Confidence 9999995 469999999999999999764
No 19
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.95 E-value=9.2e-27 Score=257.32 Aligned_cols=416 Identities=18% Similarity=0.224 Sum_probs=237.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCCCCCCceeccCC-CccccccccEEEeCC--CCChhhHHHHhhChh
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI--EVVVLEARERVGGRIVTFKK-SNYVADLGAMVVTGL--GGNPINILARQINME 213 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~~~GG~i~t~~~-~~~~~d~G~~~i~~~--~~~~~~~l~~~lgl~ 213 (661)
.++|+|||||++||+||++|+++|+ +|+|||+++++||++.+.+. +|+.+|.|++++... ....+..+.+++|++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 4689999999999999999999999 99999999999999999765 589999999987543 123456888999987
Q ss_pred hhhhcC-------CCcEEecCCCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHH
Q psy6038 214 LLKIGH-------QCPLYQSSAENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVL 286 (661)
Q Consensus 214 ~~~~~~-------~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~ 286 (661)
...... ...+...+|.. ..+|.....+.. ....+ . .+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~---~~~p~~~~~~~~--------~~~~~---------~-~~~-------------- 126 (477)
T 3nks_A 82 SEVLPVRGDHPAAQNRFLYVGGAL---HALPTGLRGLLR--------PSPPF---------S-KPL-------------- 126 (477)
T ss_dssp GGEEEECTTSHHHHCEEEEETTEE---EECCCSSCC-----------CCTTS---------C-SCS--------------
T ss_pred ceeeecCCCCchhcceEEEECCEE---EECCCChhhccc--------ccchh---------h-hHH--------------
Confidence 432211 01233334431 122222110000 00000 0 000
Q ss_pred HHHHHHHHHhhhhhhhhccCCCCCchhHHHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHH
Q psy6038 287 SRMNEILVQLDTLDQTLQNVPIDNTTAVEFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQL 366 (661)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~l 366 (661)
+... +...... ....++....+|+.+.....+.. ..+...+..+...++..+........+
T Consensus 127 --~~~~---~~~~~~~--~~~~~~~s~~~~~~~~~g~~~~~------------~~~~~~~~~~~~~~~~~ls~~~~~~~l 187 (477)
T 3nks_A 127 --FWAG---LRELTKP--RGKEPDETVHSFAQRRLGPEVAS------------LAMDSLCRGVFAGNSRELSIRSCFPSL 187 (477)
T ss_dssp --SHHH---HTTTTSC--CCCSSCCBHHHHHHHHHCHHHHH------------HTHHHHHHHHHSSCTTTBBHHHHCHHH
T ss_pred --HHHH---HHhhhcC--CCCCCCcCHHHHHHHhhCHHHHH------------HHHHHHhcccccCCHHHhhHHHHHHHH
Confidence 0000 0000000 00111122244444322211110 011222222333333222110000000
Q ss_pred HHHHHhhhhhhcCCCCccc-cc-cCCCC-CCC-----ccccCCceeeccchhHHHHHHhccC-----ceeeCceEEEEEe
Q psy6038 367 LDWHFANLEFANATPLASL-SL-KHWDQ-DDD-----FEFTGSHLTVKKGYACVPTALAEGL-----DVHFNSSVTEIHY 433 (661)
Q Consensus 367 l~~~~~~le~~~~~~l~~l-sl-~~~~~-~~~-----~~~~g~~~~v~gG~~~L~~aLa~~L-----~I~lnt~V~~I~~ 433 (661)
. .++...+.-+..+ .. ..-.. ... .......+.+++|++.|+++|++.+ +|++|++|++|..
T Consensus 188 ~-----~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~ 262 (477)
T 3nks_A 188 F-----QAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSL 262 (477)
T ss_dssp H-----HHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEE
T ss_pred H-----HHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE
Confidence 0 0000000000000 00 00000 000 0002245789999999999998754 8999999999999
Q ss_pred cCCc-eEEEEeCCCCCCCCeEEEeCEEEEccChhhhhhcCCCCCccccCCCCCHHHHHHHHHcCCccccEEEEEcccccc
Q psy6038 434 NSKG-VTVKTVDPKTGQNETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFW 512 (661)
Q Consensus 434 ~~~g-v~V~~~~~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW 512 (661)
++++ +.|.+ + +.++.||+||+|+|+.++.+ +.|++++...++++++.++++.+|++.|+++||
T Consensus 263 ~~~~~~~v~~-~------~~~~~ad~vv~a~p~~~~~~---------ll~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~ 326 (477)
T 3nks_A 263 QAEGRWKVSL-R------DSSLEADHVISAIPASVLSE---------LLPAEAAPLARALSAITAVSVAVVNLQYQGAHL 326 (477)
T ss_dssp CGGGCEEEEC-S------SCEEEESEEEECSCHHHHHH---------HSCGGGHHHHHHHHTCCEEEEEEEEEEETTCCC
T ss_pred cCCceEEEEE-C------CeEEEcCEEEECCCHHHHHH---------hccccCHHHHHHHhcCCCCcEEEEEEEECCCCC
Confidence 8777 66654 3 45799999999999999988 345566778889999999999999999999999
Q ss_pred ccCCCceeeeccCCCCCCceEEEEec---------CCCcEEEEEeccchhhhhh-----------------ccc-CCCCC
Q psy6038 513 DPAENLFGHVGSTTASRGELFLFWNL---------YQAPVLLALVAGEAASILE-----------------DVS-IFPTN 565 (661)
Q Consensus 513 ~~~~~~~g~~~~~~~~~g~~~~~~~~---------~~~~vL~~~~~g~~a~~~~-----------------~~~-~fg~~ 565 (661)
+.. .||++.+.......+...|+. ++..+|.+++.|..+..+. .+. +||.
T Consensus 327 ~~~--~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~- 403 (477)
T 3nks_A 327 PVQ--GFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGL- 403 (477)
T ss_dssp SSC--SSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCC-
T ss_pred CCC--CceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccccCCCCHHHHHHHHHHHHHHHhCC-
Confidence 643 467776543333333333321 1235777777765443321 111 6764
Q ss_pred CCCCCceEEEecCCCCCCCCcccCccCCCCCCc---chhhhcCCCCCCCCCCcEEEecccccCcCCcchhHHHHHHHHHH
Q psy6038 566 TVPQPKETVVTRWKADPFAKGSYSFVAVGASGS---DYDTLGLPVKDDKDIPRLFFAGEHTIRNYPATVHGAFLSGLKEG 642 (661)
Q Consensus 566 ~~~~p~~~~~~~W~~dp~~~Gsys~~~~g~~~~---~~~~la~p~~~~~~~~rl~FAGe~t~~~~~gtv~GA~~SG~raA 642 (661)
.++|....+++|.. ++..+.+|.... ..+.+... .++|+|||+++.. ..|++|+.||.++|
T Consensus 404 -~~~~~~~~v~rw~~------a~p~~~~g~~~~~~~~~~~l~~~------~~~l~l~G~~~~G---~gv~~a~~sg~~aA 467 (477)
T 3nks_A 404 -KEMPSHCLVHLHKN------CIPQYTLGHWQKLESARQFLTAH------RLPLTLAGASYEG---VAVNDCIESGRQAA 467 (477)
T ss_dssp -CSCCSEEEEEEEEE------EEECCBTTHHHHHHHHHHHHHHT------TCSEEECSTTTSC---CSHHHHHHHHHHHH
T ss_pred -CCCCcEEEEEEcCC------ccCCCCCCHHHHHHHHHHHHHhc------CCCEEEEccCCCC---CcHHHHHHHHHHHH
Confidence 25788899999964 555455553211 01122211 2579999999743 35999999999999
Q ss_pred HHHHHH
Q psy6038 643 GHIVDQ 648 (661)
Q Consensus 643 ~~i~~~ 648 (661)
++|+..
T Consensus 468 ~~il~~ 473 (477)
T 3nks_A 468 VSVLGT 473 (477)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 999763
No 20
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.94 E-value=2.3e-26 Score=250.25 Aligned_cols=394 Identities=16% Similarity=0.159 Sum_probs=216.9
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCccccccccEEEeCC-CCChhhHHHHhhChhhhhhc
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSNYVADLGAMVVTGL-GGNPINILARQINMELLKIG 218 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~~~~d~G~~~i~~~-~~~~~~~l~~~lgl~~~~~~ 218 (661)
+||+|||||++||+||++|+++|++|+|||+++++||++.++...|+.+|.|++++... ..+++..+.+++|++.....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIVR 80 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEEe
Confidence 48999999999999999999999999999999999999999999999999998665432 34577889999997643222
Q ss_pred CCCcE-Eec-CCCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q psy6038 219 HQCPL-YQS-SAENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRMNEILVQL 296 (661)
Q Consensus 219 ~~~~~-~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~~~~~~~~ 296 (661)
..... +.. .+.. ..+....... .+.... ..++. .+.. .+...+
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~-------------------~~~~~~-~~~~~----~~~~--------~~~~~~ 125 (425)
T 3ka7_A 81 SEMTTVRVPLKKGN---PDYVKGFKDI-------------------SFNDFP-SLLSY----KDRM--------KIALLI 125 (425)
T ss_dssp CCCCEEEEESSTTC---CSSTTCEEEE-------------------EGGGGG-GGSCH----HHHH--------HHHHHH
T ss_pred cCCceEEeecCCCc---ccccccccce-------------------ehhhhh-hhCCH----HHHH--------HHHHHH
Confidence 21111 111 1100 0000000000 000000 00000 0000 000000
Q ss_pred hhhhhhhccCCCCCchhHHHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHHHHHHHhhhhh
Q psy6038 297 DTLDQTLQNVPIDNTTAVEFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQLLDWHFANLEF 376 (661)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ll~~~~~~le~ 376 (661)
..... .........+|+.+....+.. +. .+..........++... +.. .++.. +..+
T Consensus 126 ~~~~~----~~~~~~s~~~~l~~~~~~~~~---~~---------~~~~~~~~~~~~~~~~~--s~~--~~~~~-~~~~-- 182 (425)
T 3ka7_A 126 VSTRK----NRPSGSSLQAWIKSQVSDEWL---IK---------FADSFCGWALSLKSDEV--PVE--EVFEI-IENM-- 182 (425)
T ss_dssp HHTTT----SCCCSSBHHHHHHHHCCCHHH---HH---------HHHHHHHHHHSSCGGGS--BHH--HHHHH-HHHH--
T ss_pred Hhhhh----cCCCCCCHHHHHHHhcCCHHH---HH---------HHHHHHHHHhCCCcccc--hHH--HHHHH-HHHH--
Confidence 00000 011111223443322111110 00 01111111111111110 000 00000 0000
Q ss_pred hcCCCCccccccCCCCCCCccccCCceeeccchhHHHHHHhcc-----CceeeCceEEEEEecCCceE-EEEeCCCCCCC
Q psy6038 377 ANATPLASLSLKHWDQDDDFEFTGSHLTVKKGYACVPTALAEG-----LDVHFNSSVTEIHYNSKGVT-VKTVDPKTGQN 450 (661)
Q Consensus 377 ~~~~~l~~lsl~~~~~~~~~~~~g~~~~v~gG~~~L~~aLa~~-----L~I~lnt~V~~I~~~~~gv~-V~~~~~~~~~~ 450 (661)
...+....+.+|++.|+++|++. .+|++|++|++|..+++++. |++ +
T Consensus 183 --------------------~~~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~------ 235 (425)
T 3ka7_A 183 --------------------YRFGGTGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-D------ 235 (425)
T ss_dssp --------------------HHHCSCEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-T------
T ss_pred --------------------HhcCCccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-C------
Confidence 01133456889999999999864 48999999999999888776 544 3
Q ss_pred CeEEEeCEEEEccChhhhhhcCCCCCccccCCCC--CHHHHHHHHHcCCccccEEEEEccccccccCCCceeeeccCCCC
Q psy6038 451 ETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPL--PDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGSTTAS 528 (661)
Q Consensus 451 g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~L--p~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~~~~~ 528 (661)
|++++||+||+|+|+..+.+. +...+.+ |+...+.++++.+++..+|++.|++++|... +.+.+.. .
T Consensus 236 g~~~~ad~VV~a~~~~~~~~l------l~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~----~~~~~~~-~ 304 (425)
T 3ka7_A 236 DRIHDADLVISNLGHAATAVL------CSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGHT----GVLLTPY-T 304 (425)
T ss_dssp TEEEECSEEEECSCHHHHHHH------TTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCSS----SEEECCS-S
T ss_pred CEEEECCEEEECCCHHHHHHh------cCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCcC----EEEECCC-h
Confidence 678999999999999999872 2223334 8888899999999999999999999987542 2111111 1
Q ss_pred CCceEEEEec--------CCCcEEEEEecc--chhh--------hhhccc-CCCCCCCCCCceEEEecCCCCCCCCcccC
Q psy6038 529 RGELFLFWNL--------YQAPVLLALVAG--EAAS--------ILEDVS-IFPTNTVPQPKETVVTRWKADPFAKGSYS 589 (661)
Q Consensus 529 ~g~~~~~~~~--------~~~~vL~~~~~g--~~a~--------~~~~~~-~fg~~~~~~p~~~~~~~W~~dp~~~Gsys 589 (661)
.......+.. .+..+|..++.. +... .++.+. +|+. ..+.-..+++|.. ++.
T Consensus 305 ~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~---~~~~~~~v~~~~~------~~P 375 (425)
T 3ka7_A 305 RRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKNLESEIEMGLEDLKEIFPG---KRYEVLLIQSYHD------EWP 375 (425)
T ss_dssp SSEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHSTT---CCEEEEEEEEEBT------TBC
T ss_pred hhcceEEeccCCCCCcCCCCCeEEEEEeccccccccchHHHHHHHHHHHHHhCCC---CceEEEEEEEECC------Ccc
Confidence 1111111111 122344444322 1111 112222 6764 2334457788875 344
Q ss_pred ccCCCCCCcchhhhcCCCCCCCCCCcEEEecccccCcCCcchhHHHHHHHHHHHHHH
Q psy6038 590 FVAVGASGSDYDTLGLPVKDDKDIPRLFFAGEHTIRNYPATVHGAFLSGLKEGGHIV 646 (661)
Q Consensus 590 ~~~~g~~~~~~~~la~p~~~~~~~~rl~FAGe~t~~~~~gtv~GA~~SG~raA~~i~ 646 (661)
.+.+|.. .+..-. .|.++||+||++|...+...|+||+.||.+||++|+
T Consensus 376 ~~~~~~~--~~~~~~------~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 376 VNRAASG--TDPGNE------TPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp SBSSCTT--CCCCSB------CSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred ccccccC--CCCCCC------CCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 4445421 111112 233699999999998877899999999999999886
No 21
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.94 E-value=2e-26 Score=256.95 Aligned_cols=408 Identities=14% Similarity=0.118 Sum_probs=214.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHH-CCCcEEEEcCCCCCCCceeccC-CCccccccccEEEeCCCCChhhHHHHhhChhhh
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQ-FGIEVVVLEARERVGGRIVTFK-KSNYVADLGAMVVTGLGGNPINILARQINMELL 215 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~-~g~~v~v~e~~~~~GG~i~t~~-~~~~~~d~G~~~i~~~~~~~~~~l~~~lgl~~~ 215 (661)
...||||||||+|||+||++|++ .|++|+|||+++++||+++|+. .+|+++|.|+|+++... ..+..++++++....
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~-~~v~~l~~e~~~~~~ 87 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHY-KYFDDCLDEALPKED 87 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCB-HHHHHHHHHHSCSGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCC-HHHHHHHHHhCCccc
Confidence 45799999999999999999997 5999999999999999999964 57899999999987654 345567777765433
Q ss_pred hhc--CCCcEEecCCCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHHHHHH
Q psy6038 216 KIG--HQCPLYQSSAENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRMNEIL 293 (661)
Q Consensus 216 ~~~--~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~~~~~ 293 (661)
.+. .....+..+|+. +..|.... +...+... .......+ .
T Consensus 88 ~~~~~~~~~~i~~~g~~---~~~p~~~~-------------------------~~~~~~~~-------~~~~~~~~---~ 129 (513)
T 4gde_A 88 DWYTHQRISYVRCQGQW---VPYPFQNN-------------------------ISMLPKEE-------QVKCIDGM---I 129 (513)
T ss_dssp GEEEEECCEEEEETTEE---EESSGGGG-------------------------GGGSCHHH-------HHHHHHHH---H
T ss_pred eeEEecCceEEEECCeE---eecchhhh-------------------------hhhcchhh-------HHHHHHHH---H
Confidence 221 122333445541 11111000 00000000 00000000 0
Q ss_pred HHhhhhhhhhccCCCCCchhHHHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccC---h-----hhHH
Q psy6038 294 VQLDTLDQTLQNVPIDNTTAVEFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLS---V-----KDRQ 365 (661)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~---~-----~~~~ 365 (661)
.... .. ...........+|+.+.....+... .+...+..+...++...... + ....
T Consensus 130 ~~~~---~~-~~~~~~~~s~~~~~~~~~g~~l~~~------------~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~ 193 (513)
T 4gde_A 130 DAAL---EA-RVANTKPKTFDEWIVRMMGTGIADL------------FMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKA 193 (513)
T ss_dssp HHHH---HH-HTCCSCCCSHHHHHHHHHHHHHHHH------------THHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHH
T ss_pred HHHH---hh-hcccccccCHHHHHHHhhhhhhhhh------------hcchhhhhhccCChHHhhHHHHHHhhcccchhh
Confidence 0000 00 0001111122445444333322111 11122222222222111110 0 0000
Q ss_pred HHHHHHhhhhhhcCCCCccccccCCCCCCCccc-cCCceeeccchhHHHHHHhccC-----ceeeCceEEEEEecCCceE
Q psy6038 366 LLDWHFANLEFANATPLASLSLKHWDQDDDFEF-TGSHLTVKKGYACVPTALAEGL-----DVHFNSSVTEIHYNSKGVT 439 (661)
Q Consensus 366 ll~~~~~~le~~~~~~l~~lsl~~~~~~~~~~~-~g~~~~v~gG~~~L~~aLa~~L-----~I~lnt~V~~I~~~~~gv~ 439 (661)
.+...+. . .....+.. ....+.+++|+++|+++|++.| +|++|++|++|..+++.
T Consensus 194 ~~~~~~~----------------~-~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~-- 254 (513)
T 4gde_A 194 VTTNVIL----------------G-KTAGNWGPNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT-- 254 (513)
T ss_dssp HHHHHHH----------------T-CCCCSCBTTBEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--
T ss_pred hhhhhhh----------------c-ccccccccccceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--
Confidence 0000000 0 00000111 1123456899999999999876 69999999999987664
Q ss_pred EEEeCCCCCCCCeEEEeCEEEEccChhhhhhcCCCCCccccCCCCCHHHHHHHHHcCCccccEEEEEccccccccCCC--
Q psy6038 440 VKTVDPKTGQNETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAEN-- 517 (661)
Q Consensus 440 V~~~~~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~-- 517 (661)
|++.+ |+++.||+||+|+|+..|.+ +. + ++....+...+.|.++..|.+.|+...+....+
T Consensus 255 v~~~~------G~~~~ad~vI~t~P~~~l~~-------~l--~--~~~~~~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~ 317 (513)
T 4gde_A 255 VTLQD------GTTIGYKKLVSTMAVDFLAE-------AM--N--DQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKC 317 (513)
T ss_dssp EEETT------SCEEEEEEEEECSCHHHHHH-------HT--T--CHHHHHHHTTCCEEEEEEEEEEEESSCCTTTTTCC
T ss_pred EEEcC------CCEEECCEEEECCCHHHHHH-------hc--C--chhhHhhhhcccCCceEEEEEEEeccccccccccc
Confidence 44544 88999999999999999988 22 2 345567788999999999999887654332111
Q ss_pred ---------ceeeeccC------CCCCCc---eEEEEecC--------CCcEEEEEeccchhhhhhccc-----------
Q psy6038 518 ---------LFGHVGST------TASRGE---LFLFWNLY--------QAPVLLALVAGEAASILEDVS----------- 560 (661)
Q Consensus 518 ---------~~g~~~~~------~~~~g~---~~~~~~~~--------~~~vL~~~~~g~~a~~~~~~~----------- 560 (661)
.|+.+... ....+. ....|... ....+.+++.+.....+..++
T Consensus 318 ~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~ 397 (513)
T 4gde_A 318 WLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQG 397 (513)
T ss_dssp EEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTTTHHHHHHHH
T ss_pred eeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEecccchhccCCCHHHHHHHHHHH
Confidence 11111100 000000 11111111 112344444332222121111
Q ss_pred ---CCCCCCCCCCceEEEecCCCCCCCCcccCccCCCCCCcchhhhcCCCCCCCCCCcEEEecccccCcCC-cchhHHHH
Q psy6038 561 ---IFPTNTVPQPKETVVTRWKADPFAKGSYSFVAVGASGSDYDTLGLPVKDDKDIPRLFFAGEHTIRNYP-ATVHGAFL 636 (661)
Q Consensus 561 ---~fg~~~~~~p~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~la~p~~~~~~~~rl~FAGe~t~~~~~-gtv~GA~~ 636 (661)
+.+-...+++....++||.. +|..+..|... ..+.+...+. ..+|||+|-.-...|. +.|++|+.
T Consensus 398 L~~~~~i~~~~~i~~~~v~r~~~------ayP~y~~~~~~-~~~~~~~~l~----~~~l~~~GR~g~~~Y~~~n~D~a~~ 466 (513)
T 4gde_A 398 LVNTEMLKPTDEIVSTYHRRFDH------GYPTPTLEREG-TLTQILPKLQ----DKDIWSRGRFGSWRYEVGNQDHSFM 466 (513)
T ss_dssp HHHTTSSCTTCEEEEEEEEEEEE------EEECCBTTHHH-HHHHHHHHHH----HTTEEECSTTTTCCGGGCSHHHHHH
T ss_pred HHHhcCCCCccceEEEEEEECCC------eecccCHhHHH-HHHHHHHHHh----hcCcEEecCCcccCcCCCCHHHHHH
Confidence 33333335567888999953 35444444321 1122211111 1479999955444454 78999999
Q ss_pred HHHHHHHHHHH
Q psy6038 637 SGLKEGGHIVD 647 (661)
Q Consensus 637 SG~raA~~i~~ 647 (661)
||+.||++|++
T Consensus 467 ~g~~aa~~I~~ 477 (513)
T 4gde_A 467 LGVEAVDNIVN 477 (513)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 99999999985
No 22
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.93 E-value=5.6e-26 Score=247.20 Aligned_cols=91 Identities=23% Similarity=0.317 Sum_probs=74.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCC-CcEEEEcCCCCCCCceeccCCCccccccccEEEeCCCCChhhHHHHhhChhhhh
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFG-IEVVVLEARERVGGRIVTFKKSNYVADLGAMVVTGLGGNPINILARQINMELLK 216 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g-~~v~v~e~~~~~GG~i~t~~~~~~~~d~G~~~i~~~~~~~~~~l~~~lgl~~~~ 216 (661)
+.++|+|||||++||+||++|+++| ++|+|+|+++++|||+.|.+.+|..+|.|++++... ...+..+++++|++...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~~-~~~~~~l~~~~g~~~~~ 83 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVPS-YDTIQEIMDRTGDKVDG 83 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCTT-CHHHHHHHHHHCCCCCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecCC-cHHHHHHHHHhCCcccc
Confidence 4679999999999999999999999 999999999999999999998999999999988643 34567888999987543
Q ss_pred hcCCCcEEecCCC
Q psy6038 217 IGHQCPLYQSSAE 229 (661)
Q Consensus 217 ~~~~~~~~~~~G~ 229 (661)
......++..+|.
T Consensus 84 ~~~~~~~~~~~g~ 96 (424)
T 2b9w_A 84 PKLRREFLHEDGE 96 (424)
T ss_dssp CCCCEEEECTTSC
T ss_pred ccccceeEcCCCC
Confidence 2222234445554
No 23
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.91 E-value=5.7e-23 Score=223.23 Aligned_cols=377 Identities=16% Similarity=0.142 Sum_probs=205.3
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCccccccccEEEeCC-CCChhhHHHHhhChhhhh--
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSNYVADLGAMVVTGL-GGNPINILARQINMELLK-- 216 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~~~~d~G~~~i~~~-~~~~~~~l~~~lgl~~~~-- 216 (661)
+||+|||||++||+||++|+++|++|+|||+++++||++.+++.+|+.+|.|++++... ..+.+..+.+++|+....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIVN 80 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEEE
Confidence 48999999999999999999999999999999999999999999999999998765433 345777889998875332
Q ss_pred hcCCCcEEecCCCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHh
Q psy6038 217 IGHQCPLYQSSAENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRMNEILVQL 296 (661)
Q Consensus 217 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~~~~~~~~ 296 (661)
......++. +|. .+.++... ..+.. .+ .......+ ...
T Consensus 81 ~~~~~~~~~-~g~---~~~~~~~~---------------~~l~~------------------~~-~~~~~~~~----~~~ 118 (421)
T 3nrn_A 81 SNPKGKILW-EGK---IFHYRESW---------------KFLSV------------------KE-KAKALKLL----AEI 118 (421)
T ss_dssp CSSSCEEEE-TTE---EEEGGGGG---------------GGCC---------------------------CCH----HHH
T ss_pred CCCCeEEEE-CCE---EEEcCCch---------------hhCCH------------------hH-HHHHHHHH----HHH
Confidence 222222222 443 01111100 00000 00 00000000 000
Q ss_pred hhhhhhhccCCCCCchhHHHhhhh-hhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccChhhHHHHHHHHhhhh
Q psy6038 297 DTLDQTLQNVPIDNTTAVEFQKRS-TRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLSVKDRQLLDWHFANLE 375 (661)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ll~~~~~~le 375 (661)
... ..........+|+.+. ...... +. .+...........+... +. ..++... ..+.
T Consensus 119 ~~~-----~~~~~~~s~~~~l~~~g~~~~~~---~~---------~~~~~~~~~~~~~~~~~--~~--~~~~~~~-~~~~ 176 (421)
T 3nrn_A 119 RMN-----KLPKEEIPADEWIKEKIGENEFL---LS---------VLESFAGWADSVSLSDL--TA--LELAKEI-RAAL 176 (421)
T ss_dssp HTT-----CCCCCCSBHHHHHHHHTCCCHHH---HH---------HHHHHHHHHHSSCGGGS--BH--HHHHHHH-HHHH
T ss_pred Hhc-----cCCCCCCCHHHHHHHhcCCcHHH---HH---------HHHHHHHHhcCCCcccC--CH--HHHHHHH-HHHh
Confidence 000 0000111123333221 111100 00 01111111111111110 00 0001000 0000
Q ss_pred hhcCCCCccccccCCCCCCCccccCCceeeccchhHHHHHHhcc-----CceeeCceEEEEEecCCceEEEEeCCCCCCC
Q psy6038 376 FANATPLASLSLKHWDQDDDFEFTGSHLTVKKGYACVPTALAEG-----LDVHFNSSVTEIHYNSKGVTVKTVDPKTGQN 450 (661)
Q Consensus 376 ~~~~~~l~~lsl~~~~~~~~~~~~g~~~~v~gG~~~L~~aLa~~-----L~I~lnt~V~~I~~~~~gv~V~~~~~~~~~~ 450 (661)
..+..+.+++|++.|+++|++. .+|++|++|++|..+++++ | +.+
T Consensus 177 ----------------------~~~g~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~------ 226 (421)
T 3nrn_A 177 ----------------------RWGGPGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRD------ 226 (421)
T ss_dssp ----------------------HHCSCEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETT------
T ss_pred ----------------------hcCCcceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeC------
Confidence 0123457899999999999863 4899999999999988887 5 333
Q ss_pred CeEEEeCEEEEccChhhhhhcCCCCCccccCCCCCHHHHHHHHHcCCccccEEEEEccccccccCCCceeeeccCCCCCC
Q psy6038 451 ETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGSTTASRG 530 (661)
Q Consensus 451 g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~~~~~~g 530 (661)
|++++||+||+|+|+..+.+ +.-.+.+|+...+.++++.++...+|.+.++++..... .++ ..++.. -.
T Consensus 227 g~~~~ad~Vv~a~~~~~~~~-------ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~-~~~--~~~~~~-~~ 295 (421)
T 3nrn_A 227 NEEYSFDVAISNVGVRETVK-------LIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIGN-TIV--FTPGLM-IN 295 (421)
T ss_dssp CCEEECSEEEECSCHHHHHH-------HHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSCS-SEE--ECTTSS-SC
T ss_pred CcEEEeCEEEECCCHHHHHH-------hcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCcccCC-eEE--EcCCcc-ee
Confidence 67899999999999999887 32224688888889999999999999999999854321 111 111111 00
Q ss_pred ceEEEEec-------CCCcEEEEEe--ccch-hh----hhhccc-CCCCCCCCCCceEEEecCCCCCCCCcccC-cc-CC
Q psy6038 531 ELFLFWNL-------YQAPVLLALV--AGEA-AS----ILEDVS-IFPTNTVPQPKETVVTRWKADPFAKGSYS-FV-AV 593 (661)
Q Consensus 531 ~~~~~~~~-------~~~~vL~~~~--~g~~-a~----~~~~~~-~fg~~~~~~p~~~~~~~W~~dp~~~Gsys-~~-~~ 593 (661)
.+ .+.+. .+..++.... .... .+ .++++. +|+ ......+++|.. ++. |. .+
T Consensus 296 ~i-~~~s~~~p~~ap~G~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~p-----~~~~~~~~~~~~------~~p~~~~~~ 363 (421)
T 3nrn_A 296 GF-NEPSALDKSLAREGYTLIMAHMALKNGNVKKAIEKGWEELLEIFP-----EGEPLLAQVYRD------GNPVNRTRA 363 (421)
T ss_dssp EE-ECGGGTCGGGSCTTEEEEEEEEECTTCCHHHHHHHHHHHHHHHCT-----TCEEEEEEEC-----------------
T ss_pred eE-eccCCCCCCcCCCCceEEEEEEeeccccHHHHHHHHHHHHHHHcC-----CCeEEEeeeccC------CCCcccccC
Confidence 11 11110 1122333322 2111 11 122232 676 223345677853 222 11 12
Q ss_pred CCCCcchhhhcCCCCCCCCCCcEEEecccccCcCCcchhHHHHHHHHHHHHH
Q psy6038 594 GASGSDYDTLGLPVKDDKDIPRLFFAGEHTIRNYPATVHGAFLSGLKEGGHI 645 (661)
Q Consensus 594 g~~~~~~~~la~p~~~~~~~~rl~FAGe~t~~~~~gtv~GA~~SG~raA~~i 645 (661)
+. + +. ..+ ++||+||+++...+.-+|+||+.||.+||++|
T Consensus 364 ~~---~---~~-----~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 364 GL---H---IE-----WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp -----C---CC-----CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CC---C---CC-----CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 21 1 11 134 79999999998643447799999999999998
No 24
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.91 E-value=6.9e-23 Score=215.33 Aligned_cols=205 Identities=15% Similarity=0.176 Sum_probs=143.0
Q ss_pred eeeccchhHHHHHHhccCceeeCceEEEEEecCCceEEEEeCCCCCCCCeEE-EeCEEEEccChhhhhhcCCCCCccccC
Q psy6038 403 LTVKKGYACVPTALAEGLDVHFNSSVTEIHYNSKGVTVKTVDPKTGQNETVY-TGDRVLCTLPLGILKACIQPPKDVLFN 481 (661)
Q Consensus 403 ~~v~gG~~~L~~aLa~~L~I~lnt~V~~I~~~~~gv~V~~~~~~~~~~g~~i-~AD~VV~TvP~~vL~~~~~~~~~i~f~ 481 (661)
+....|++.|.++|+++++|+++++|++|+.+++++.|++.+ |+.+ +||+||+|.|...+.+. +.+.
T Consensus 103 ~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~~~v~~~~------g~~~~~a~~vV~a~g~~~~~~~------~~~~ 170 (336)
T 1yvv_A 103 WVGKPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAE------GQNHGPFSHVIIATPAPQASTL------LAAA 170 (336)
T ss_dssp EEESSCTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETT------SCEEEEESEEEECSCHHHHGGG------GTTC
T ss_pred EEcCccHHHHHHHHHccCcEEecCEEEEEEEeCCEEEEEeCC------CcCccccCEEEEcCCHHHHHHh------hccC
Confidence 455679999999999999999999999999999999888754 5555 49999999999988771 2232
Q ss_pred CCCCHHHHHHHHHcCCccccEEEEEccccccccCCCceeeeccCCCCCCceEEEEecC----CC---cEEEEEeccchhh
Q psy6038 482 PPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGSTTASRGELFLFWNLY----QA---PVLLALVAGEAAS 554 (661)
Q Consensus 482 P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~~~~~~g~~~~~~~~~----~~---~vL~~~~~g~~a~ 554 (661)
+....+++.+.|++..++.+.|++++|.... .++. . .+.+..++..+ .. ..++.+..++.+.
T Consensus 171 ----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~----~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~ 239 (336)
T 1yvv_A 171 ----PKLASVVAGVKMDPTWAVALAFETPLQTPMQ-GCFV--Q----DSPLDWLARNRSKPERDDTLDTWILHATSQWSR 239 (336)
T ss_dssp ----HHHHHHHTTCCEEEEEEEEEEESSCCSCCCC-EEEE--C----SSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHH
T ss_pred ----HHHHHHHhhcCccceeEEEEEecCCCCCCCC-eEEe--C----CCceeEEEecCcCCCCCCCCcEEEEEeCHHHHH
Confidence 3446788999999999999999999997532 2221 1 12333332221 11 2455555555444
Q ss_pred hhhccc--------------CCCCCCCCCCceEEEecCCCCCCCCcccCccCCCCCCcchhhhcCCCCCCCCCCcEEEec
Q psy6038 555 ILEDVS--------------IFPTNTVPQPKETVVTRWKADPFAKGSYSFVAVGASGSDYDTLGLPVKDDKDIPRLFFAG 620 (661)
Q Consensus 555 ~~~~~~--------------~fg~~~~~~p~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~la~p~~~~~~~~rl~FAG 620 (661)
.+..++ +||. ..+.|....+++|. |+...|.. +.. .+.. ..+||+|||
T Consensus 240 ~~~~~~~~~~~~~l~~~l~~~lg~-~~~~p~~~~~~rw~---~a~~~~~~---~~~-----~~~~------~~~rl~laG 301 (336)
T 1yvv_A 240 QNLDASREQVIEHLHGAFAELIDC-TMPAPVFSLAHRWL---YARPAGAH---EWG-----ALSD------ADLGIYVCG 301 (336)
T ss_dssp HTTTSCHHHHHHHHHHHHHTTCSS-CCCCCSEEEEEEEE---EEEESSCC---CCS-----CEEE------TTTTEEECC
T ss_pred HHHhCCHHHHHHHHHHHHHHHhCC-CCCCCcEEEccccC---ccCCCCCC---CCC-----eeec------CCCCEEEEe
Confidence 443333 6775 35678888899997 22333321 110 1111 137999999
Q ss_pred ccccCcCCcchhHHHHHHHHHHHHHHHHhhc
Q psy6038 621 EHTIRNYPATVHGAFLSGLKEGGHIVDQILG 651 (661)
Q Consensus 621 e~t~~~~~gtv~GA~~SG~raA~~i~~~~~g 651 (661)
++++. ++|+||+.||.++|++|.+.+..
T Consensus 302 Da~~g---~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 302 DWCLS---GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp GGGTT---SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCC---CCHHHHHHHHHHHHHHHHHHhhh
Confidence 99964 69999999999999999998754
No 25
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.90 E-value=5.4e-22 Score=219.05 Aligned_cols=407 Identities=14% Similarity=0.095 Sum_probs=217.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCC-CcEEEEcCCCCCCCceecc-CCCccccccccEEEeCCCCChhhHHHHhhChhhh
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFG-IEVVVLEARERVGGRIVTF-KKSNYVADLGAMVVTGLGGNPINILARQINMELL 215 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g-~~v~v~e~~~~~GG~i~t~-~~~~~~~d~G~~~i~~~~~~~~~~l~~~lgl~~~ 215 (661)
+.++|+|||||++||+||++|+++| .+|+|+|+++++||++.+. ..+|..+|.|++++... ...+..+.+++.-+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~-~~~~~~l~~~~~~~~~ 86 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSH-YQYFDDVMDWAVQGWN 86 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCS-BHHHHHHHHHHCSCEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccC-hHHHHHHHHHHhhhhh
Confidence 4679999999999999999999999 7999999999999999995 67899999999998653 2344566666532111
Q ss_pred hhcCCCcEEecCCCCCCCCcCCCchhhHHHHHHHHHHHHhhhhhcccccccccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q psy6038 216 KIGHQCPLYQSSAENSDNLQVPKDKDDLVEREFNRLLECTSYLSHTLDFNYLEGKPLSLVIELQEELKPVLSRMNEILVQ 295 (661)
Q Consensus 216 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~s~~i~~~~~~~~~~~~~~~~~~~ 295 (661)
. ......+..+|+. ..+|.... +...+. .... .....+ ...
T Consensus 87 ~-~~~~~~~~~~g~~---~~~P~~~~-------------------------~~~l~~------~~~~-~~~~~l---l~~ 127 (484)
T 4dsg_A 87 V-LQRESWVWVRGRW---VPYPFQNN-------------------------IHRLPE------QDRK-RCLDEL---VRS 127 (484)
T ss_dssp E-EECCCEEEETTEE---EESSGGGC-------------------------GGGSCH------HHHH-HHHHHH---HHH
T ss_pred h-ccCceEEEECCEE---EEeCccch-------------------------hhhCCH------HHHH-HHHHHH---HHH
Confidence 1 1122333344541 12221000 000000 0000 000001 100
Q ss_pred hhhhhhhhccCCCCCchhHHHhhhhhhhhHHHHHHHhHHhhHHHHHHHHHHhhhhcCCCCccccC--------hhhHHHH
Q psy6038 296 LDTLDQTLQNVPIDNTTAVEFQKRSTRRDMNHLCTEYDQLNEKKTQLQAKLHAMESNPPADVYLS--------VKDRQLL 367 (661)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~l~--------~~~~~ll 367 (661)
. ......+.....+|+.+.....+.. .+ +...+...+..++..+... .....++
T Consensus 128 ----~--~~~~~~~~~s~~e~~~~~~g~~~~~---~~---------~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~ 189 (484)
T 4dsg_A 128 ----H--ARTYTEPPNNFEESFTRQFGEGIAD---IF---------MRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIR 189 (484)
T ss_dssp ----H--HCCCSSCCSSHHHHHHHHHHHHHCC---CC---------CHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHH
T ss_pred ----H--hccCCCCCCCHHHHHHHHhHHHHHH---HH---------HHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHH
Confidence 0 0001111122345554433222211 00 1111112222222111110 0011111
Q ss_pred HHHHhhhhhhcCCCCccccccCCCCCCCccccCCce-eeccchhHHHHHHhccC---ceeeC--ceEEEEEecCCceEEE
Q psy6038 368 DWHFANLEFANATPLASLSLKHWDQDDDFEFTGSHL-TVKKGYACVPTALAEGL---DVHFN--SSVTEIHYNSKGVTVK 441 (661)
Q Consensus 368 ~~~~~~le~~~~~~l~~lsl~~~~~~~~~~~~g~~~-~v~gG~~~L~~aLa~~L---~I~ln--t~V~~I~~~~~gv~V~ 441 (661)
.-. +.... .......+... .+.||+++|+++|++.+ +|+++ ++|++|..++++|+
T Consensus 190 ~~~---~~~~~--------------~~~~~~~~~f~yp~~gG~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v~-- 250 (484)
T 4dsg_A 190 RNI---QENRD--------------DLGWGPNATFRFPQRGGTGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTIT-- 250 (484)
T ss_dssp HHH---HHTCC--------------CCCCSTTSEEEEESSSCTHHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEEE--
T ss_pred HHH---hhccc--------------ccCCCccceEEeecCCCHHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEEE--
Confidence 100 00000 00000112222 35699999999999988 79999 56999998877653
Q ss_pred EeCCCCCCCCeEEEeCEEEEccChhhhhhcCCCCCccc--cCCCCCHHHHHHHHHcCCccccEEEEEccccccccCCCce
Q psy6038 442 TVDPKTGQNETVYTGDRVLCTLPLGILKACIQPPKDVL--FNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLF 519 (661)
Q Consensus 442 ~~~~~~~~~g~~i~AD~VV~TvP~~vL~~~~~~~~~i~--f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~ 519 (661)
+.+ |+++.||+||+|+|+..+.+ +. ..|++|+...++++++.|.++.+|.+.|+.+--..-...+
T Consensus 251 ~~~------G~~~~ad~VI~a~p~~~~~~-------ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~ 317 (484)
T 4dsg_A 251 FSN------GEVVSYDYLISTVPFDNLLR-------MTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTAC 317 (484)
T ss_dssp ETT------SCEEECSEEEECSCHHHHHH-------HEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCC
T ss_pred ECC------CCEEECCEEEECCCHHHHHH-------HhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCe
Confidence 333 67899999999999999988 33 2356889999999999999999999999986321101223
Q ss_pred eeeccCCCCCCceEEEEec------C-CCcEEEEEeccchhh----------hhhccc-CCCCCCCCCC-ceEEEecCCC
Q psy6038 520 GHVGSTTASRGELFLFWNL------Y-QAPVLLALVAGEAAS----------ILEDVS-IFPTNTVPQP-KETVVTRWKA 580 (661)
Q Consensus 520 g~~~~~~~~~g~~~~~~~~------~-~~~vL~~~~~g~~a~----------~~~~~~-~fg~~~~~~p-~~~~~~~W~~ 580 (661)
+...++....-....+++. + +..+++..+...... .++++. +.+- ...++ ....+++|.
T Consensus 318 ~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~~~~~~d~~l~~~a~~~L~~~~~~-~~~~~~~~~~v~r~~- 395 (484)
T 4dsg_A 318 WLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSESKYKPVNHSTLIEDCIVGCLASNLL-LPEDLLVSKWHYRIE- 395 (484)
T ss_dssp EEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEBTTBCCCTTSHHHHHHHHHHHTTSC-CTTCCEEEEEEEEEE-
T ss_pred EEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecCcCCcCCHHHHHHHHHHHHHHcCCC-CccceEEEEEEEEeC-
Confidence 4433322211111112111 1 122444444322110 111111 2221 11123 345688884
Q ss_pred CCCCCcccCccCCCCCCcchhhhcCCCCCCCCCCcEEEecccccCcCC-cchhHHHHHHHHHHHHHH
Q psy6038 581 DPFAKGSYSFVAVGASGSDYDTLGLPVKDDKDIPRLFFAGEHTIRNYP-ATVHGAFLSGLKEGGHIV 646 (661)
Q Consensus 581 dp~~~Gsys~~~~g~~~~~~~~la~p~~~~~~~~rl~FAGe~t~~~~~-gtv~GA~~SG~raA~~i~ 646 (661)
.+|..+.+|... ..+.+.+.+. .. +|+|+|......|. .-|+.|+.||++||++|+
T Consensus 396 -----~~yP~y~~~~~~-~~~~~~~~l~---~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 396 -----KGYPTPFIGRNN-LLEKAQPELM---SR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp -----EEEECCBTTHHH-HHHHHHHHHH---HT-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred -----ccccCCCccHHH-HHHHHHHHHH---hC-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 567666565321 1222222221 12 79999997665432 459999999999999997
No 26
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.83 E-value=9.8e-21 Score=203.92 Aligned_cols=74 Identities=23% Similarity=0.313 Sum_probs=64.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHC-CCcEEEEcCCCCCCCceeccCC--Ccccc-ccccEEEeCCCCChhhHHHHhhCh
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQF-GIEVVVLEARERVGGRIVTFKK--SNYVA-DLGAMVVTGLGGNPINILARQINM 212 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~-g~~v~v~e~~~~~GG~i~t~~~--~~~~~-d~G~~~i~~~~~~~~~~l~~~lgl 212 (661)
..++|+|||||++||+||++|+++ |++|+|+|+++++||++.|.+. .|..+ +.|+++++.. ...+..+.+++|+
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~-~~~~~~~~~~~g~ 83 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTS-NKRVWDYVRQFTD 83 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEES-CHHHHHHHTTTCC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCC-cHHHHHHHHHhhh
Confidence 357999999999999999999999 9999999999999999999887 57777 5999998754 3456678888886
No 27
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.73 E-value=8.2e-19 Score=166.69 Aligned_cols=102 Identities=19% Similarity=0.230 Sum_probs=87.0
Q ss_pred cEEEEEeccchhhhhhccc--------------CCCCCCCCCCc-eE--EEecCCCCCCCCcccCccCCCCCCcchhhhc
Q psy6038 542 PVLLALVAGEAASILEDVS--------------IFPTNTVPQPK-ET--VVTRWKADPFAKGSYSFVAVGASGSDYDTLG 604 (661)
Q Consensus 542 ~vL~~~~~g~~a~~~~~~~--------------~fg~~~~~~p~-~~--~~~~W~~dp~~~Gsys~~~~g~~~~~~~~la 604 (661)
.+|++|+.|+.+..++.++ +||.. + .+. .+ ++++|.+|||++|+|+++.||+...+++.|+
T Consensus 37 ~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~-~-~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~ 114 (181)
T 2e1m_C 37 VVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRR-I-EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVV 114 (181)
T ss_dssp EEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGG-G-GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHH
T ss_pred EEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCC-c-HhhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHh
Confidence 4888999999888776655 78754 3 444 67 9999999999999999999998767778899
Q ss_pred CCCCCCCCCCcEEEecccccCcCCcchhHHHHHHHHHHHHHHHHhhcC
Q psy6038 605 LPVKDDKDIPRLFFAGEHTIRNYPATVHGAFLSGLKEGGHIVDQILGA 652 (661)
Q Consensus 605 ~p~~~~~~~~rl~FAGe~t~~~~~gtv~GA~~SG~raA~~i~~~~~g~ 652 (661)
+|+ +|||||||||+. |+||||||++||+|||.+|++.+.+.
T Consensus 115 ~p~------grl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l~~~ 155 (181)
T 2e1m_C 115 RPE------GPVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAPVGD 155 (181)
T ss_dssp SCB------TTEEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCCC--
T ss_pred CCC------CcEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHhccC
Confidence 886 799999999996 99999999999999999999988653
No 28
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.72 E-value=5.1e-17 Score=172.81 Aligned_cols=72 Identities=21% Similarity=0.310 Sum_probs=62.2
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCccccc-cccEEEeCCCCChhhHHHHhhCh
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSNYVAD-LGAMVVTGLGGNPINILARQINM 212 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~~~~d-~G~~~i~~~~~~~~~~l~~~lgl 212 (661)
.+|+|||||++||+||++|+++|++|+|+|+++++||++.+...+|..+| .|+++++... ..+..+.++++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~~~~-~~~~~~~~~l~~ 74 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHTND-KYIWDYVNDLVE 74 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTEEEETTSCCCEEESC-HHHHHHHHTTSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCceeeccCCceecCCC-HHHHHHHHHhhh
Confidence 58999999999999999999999999999999999999999887888884 9999987653 345566777774
No 29
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.71 E-value=2e-16 Score=169.24 Aligned_cols=73 Identities=21% Similarity=0.403 Sum_probs=63.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCC--Ccccc-ccccEEEeCCCCChhhHHHHhhCh
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKK--SNYVA-DLGAMVVTGLGGNPINILARQINM 212 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~--~~~~~-d~G~~~i~~~~~~~~~~l~~~lgl 212 (661)
..+|+|||||++||+||+.|++.|++|+|+|+++++||++.+.+. .|..+ |.|+++++.. ...+..+.++++.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~-~~~~~~~~~~l~~ 78 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTD-NETVWNYVNKHAE 78 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEES-CHHHHHHHHTTSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCC-CHHHHHHHHHHhh
Confidence 368999999999999999999999999999999999999999877 67765 9999999864 3456677888875
No 30
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.67 E-value=4.6e-15 Score=149.16 Aligned_cols=58 Identities=29% Similarity=0.504 Sum_probs=53.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCccccccccEEEe
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSNYVADLGAMVVT 196 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~~~~d~G~~~i~ 196 (661)
..||+|||||||||+||+.|+++|++|+||||++++|||+.+.+.++..+|+|+.++.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~~~d~g~~~~~ 59 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFT 59 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCceeecCccccc
Confidence 4689999999999999999999999999999999999999998888888888876553
No 31
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.65 E-value=1.6e-15 Score=160.24 Aligned_cols=79 Identities=32% Similarity=0.520 Sum_probs=68.1
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCC-CCCCCceeccC----------CCccccccccEEEeCCCCChhhH
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEAR-ERVGGRIVTFK----------KSNYVADLGAMVVTGLGGNPINI 205 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~-~~~GG~i~t~~----------~~~~~~d~G~~~i~~~~~~~~~~ 205 (661)
...++|+|||||++||+||+.|+++|++|+|||++ +++|||+.|++ ..+..+|+|++++... ...+..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~-~~~~~~ 120 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSF-HPLTLA 120 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETT-CHHHHH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecch-HHHHHH
Confidence 45689999999999999999999999999999999 99999999987 3577899999998654 345668
Q ss_pred HHHhhChhhhh
Q psy6038 206 LARQINMELLK 216 (661)
Q Consensus 206 l~~~lgl~~~~ 216 (661)
+++++|++...
T Consensus 121 ~~~~lGl~~~~ 131 (376)
T 2e1m_A 121 LIDKLGLKRRL 131 (376)
T ss_dssp HHHHTTCCEEE
T ss_pred HHHHcCCCcce
Confidence 89999986543
No 32
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.61 E-value=7.6e-15 Score=160.58 Aligned_cols=76 Identities=17% Similarity=0.248 Sum_probs=60.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCc-cc---------------cccccEEEeCC---
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSN-YV---------------ADLGAMVVTGL--- 198 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~-~~---------------~d~G~~~i~~~--- 198 (661)
..+||||||||++||+||..|+++|++|+|+|+++++||++.|++.++ +. ++.|.+++.+.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P~ 89 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIPK 89 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeeccccc
Confidence 457999999999999999999999999999999999999999976544 11 44555544332
Q ss_pred ---CCChhhHHHHhhChh
Q psy6038 199 ---GGNPINILARQINME 213 (661)
Q Consensus 199 ---~~~~~~~l~~~lgl~ 213 (661)
....+..+++++|+.
T Consensus 90 ~l~~~~~l~~ll~~lg~~ 107 (453)
T 2bcg_G 90 FLMANGELTNILIHTDVT 107 (453)
T ss_dssp BEETTSHHHHHHHHHTGG
T ss_pred eeecCcHHHHHHHhcCCc
Confidence 235677888899875
No 33
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.60 E-value=6.4e-15 Score=160.20 Aligned_cols=75 Identities=16% Similarity=0.211 Sum_probs=63.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccC-C--------------------CccccccccEEEe
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFK-K--------------------SNYVADLGAMVVT 196 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~-~--------------------~~~~~d~G~~~i~ 196 (661)
..++|+|||||++||+||..|+++|++|+|+|+++++||++.|++ . .++.+|+|++++.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~ 84 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLM 84 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceee
Confidence 357999999999999999999999999999999999999999987 1 3456788888776
Q ss_pred CCCCChhhHHHHhhChhh
Q psy6038 197 GLGGNPINILARQINMEL 214 (661)
Q Consensus 197 ~~~~~~~~~l~~~lgl~~ 214 (661)
.. .++..+++++|+..
T Consensus 85 ~~--~~l~~ll~~lgl~~ 100 (433)
T 1d5t_A 85 AN--GQLVKMLLYTEVTR 100 (433)
T ss_dssp TT--SHHHHHHHHHTGGG
T ss_pred cc--chHHHHHHHcCCcc
Confidence 43 46778889999763
No 34
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.58 E-value=5e-15 Score=157.83 Aligned_cols=75 Identities=16% Similarity=0.306 Sum_probs=64.2
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccC-CCccc-cccccEEEeCCCCChhhHHHHhhCh
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFK-KSNYV-ADLGAMVVTGLGGNPINILARQINM 212 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~-~~~~~-~d~G~~~i~~~~~~~~~~l~~~lgl 212 (661)
....+|+|||||++||+||++|++.|++|+|+|+++++||++.+.+ ..|.. .|.|+++++.. ...+..+.++++.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~-~~~~~~~~~~~~~ 103 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTN-SKDVFEYLSRFTE 103 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEES-CHHHHHHHHTSCC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCC-hHHHHHHHHHhhh
Confidence 4568999999999999999999999999999999999999999876 56765 49999998744 3456678888884
No 35
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.49 E-value=3.8e-13 Score=146.09 Aligned_cols=74 Identities=15% Similarity=0.317 Sum_probs=61.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCC--------------------ccccccccEEEeC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKS--------------------NYVADLGAMVVTG 197 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~--------------------~~~~d~G~~~i~~ 197 (661)
..+||+|||+|++|+++|+.|++.|++|+|+|+++++||++.++..+ ++.+|++.+++..
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~~ 98 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFILV 98 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEET
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEeec
Confidence 45799999999999999999999999999999999999998876532 3578888888754
Q ss_pred CCCChhhHHHHhhChh
Q psy6038 198 LGGNPINILARQINME 213 (661)
Q Consensus 198 ~~~~~~~~l~~~lgl~ 213 (661)
. ..+..++.+.++.
T Consensus 99 ~--g~L~~lL~~~gv~ 112 (475)
T 3p1w_A 99 G--GNLVKILKKTRVT 112 (475)
T ss_dssp T--SHHHHHHHHTTCG
T ss_pred C--cHHHHHHHHCCch
Confidence 3 3566777777764
No 36
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.40 E-value=2.8e-13 Score=119.63 Aligned_cols=90 Identities=21% Similarity=0.309 Sum_probs=70.0
Q ss_pred CeEEEeCEEEEccChhhhhhcCCCCCccccCCCCCHHHHHHHHHcCCccccEEEEEccccccccCCCceeeeccCCCCCC
Q psy6038 451 ETVYTGDRVLCTLPLGILKACIQPPKDVLFNPPLPDWKVKSIRRLGYGLLNKVVLCFDKIFWDPAENLFGHVGSTTASRG 530 (661)
Q Consensus 451 g~~i~AD~VV~TvP~~vL~~~~~~~~~i~f~P~Lp~~k~~ai~~l~~g~~~Kv~l~f~~~fW~~~~~~~g~~~~~~~~~g 530 (661)
.++++||+||||+|+++|+. |.|+|+||++|.+||++++||..+||++.|+++||+++...++ .+.
T Consensus 3 ~~~~~Ad~VIvTvP~~vL~~-------I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~~gd--~s~----- 68 (130)
T 2e1m_B 3 TQTWTGDLAIVTIPFSSLRF-------VKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEADWK--REL----- 68 (130)
T ss_dssp CEEEEESEEEECSCHHHHTT-------SEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHHHHH--HHH-----
T ss_pred ceEEEcCEEEEcCCHHHHhc-------CcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCcccc--ccC-----
Confidence 46899999999999999998 9999999999999999999999999999999999987532111 000
Q ss_pred ceEEEEecCCCcEEEEEe-ccchhhhhhccc
Q psy6038 531 ELFLFWNLYQAPVLLALV-AGEAASILEDVS 560 (661)
Q Consensus 531 ~~~~~~~~~~~~vL~~~~-~g~~a~~~~~~~ 560 (661)
...+.++|++|+ +|+.|..+..++
T Consensus 69 ------~~~~pg~l~~f~~wg~~A~~~~~l~ 93 (130)
T 2e1m_B 69 ------DAIAPGLYDYYQQWGEDDAEAALAL 93 (130)
T ss_dssp ------HHHSTTHHHHHHHHCCCSCCCC---
T ss_pred ------CCCCCeEEEEecccCHHHHHHhcCC
Confidence 011234788888 488887766654
No 37
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=99.35 E-value=1.6e-12 Score=108.18 Aligned_cols=85 Identities=21% Similarity=0.450 Sum_probs=76.6
Q ss_pred HHcCCCCCCCChhHhhhccccccC--CccchhHHHHHHHHHHHHHhcCCCCCCCHHHHhccccCCCCcchhhHHHHHHHH
Q psy6038 40 FQSRLPYDKMTTNEVQYFPDISNN--PIHSHKTFLHIRNRILQMWLENPKVQLTLEFVMQKIESPFNSEVQLVSRLHCYL 117 (661)
Q Consensus 40 ~~~~l~~~~~~~~e~~~~p~~~~~--~~~~~~~~l~irn~~~~~~~~np~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (661)
.++.++++.++++|.++|||...+ +..+...|+.|||.|+.+|..||..++|...|++.+. ++...|.+|+.||
T Consensus 16 ~s~wF~~~~Ih~iEk~~lPEfF~g~~~~ktpe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l~----gDv~~i~RVh~FL 91 (104)
T 2fq3_A 16 YSKWFNLEKIHSIEVQSLPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNVS----GDAAALFRLHKFL 91 (104)
T ss_dssp -CTTCCTTCCCHHHHHHCGGGCCSSCTTSCHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHSC----SCHHHHHHHHHHH
T ss_pred cccccCcccCCHHHHHHChHHhcCCCCCCCHHHHHHHHHHHHHHHHhCCceeeeHHHHHHHcc----ccHHHHHHHHHHH
Confidence 458999999999999999998774 4568899999999999999999999999999998884 5788999999999
Q ss_pred HHhhHHhcCCc
Q psy6038 118 ERHGYINFGIF 128 (661)
Q Consensus 118 ~~~~~~~~~~~ 128 (661)
++.|+||||+-
T Consensus 92 e~wGLIN~~v~ 102 (104)
T 2fq3_A 92 TKWGLINYQVD 102 (104)
T ss_dssp HHTTSSSSCC-
T ss_pred HHcCeeccCCC
Confidence 99999999873
No 38
>2dce_A KIAA1915 protein; swirm domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=5.8e-12 Score=106.77 Aligned_cols=89 Identities=27% Similarity=0.391 Sum_probs=79.2
Q ss_pred HHcCCCCCCCChhHhhhccccccC-CccchhHHHHHHHHHHHHHhcCCCCCCCHHHHhccccCCCCcchhhHHHHHHHHH
Q psy6038 40 FQSRLPYDKMTTNEVQYFPDISNN-PIHSHKTFLHIRNRILQMWLENPKVQLTLEFVMQKIESPFNSEVQLVSRLHCYLE 118 (661)
Q Consensus 40 ~~~~l~~~~~~~~e~~~~p~~~~~-~~~~~~~~l~irn~~~~~~~~np~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (661)
.+..++++.++++|.++|||...+ +..+...|+.|||.|+.+|..||...+|...|++.+... ++...|.+|+.||.
T Consensus 18 ~~~wf~~~~ih~iEk~~lPefF~g~~~ktpe~Yl~iRN~iI~~yr~np~~yLT~t~~rr~L~~~--gDv~~i~RVh~FLe 95 (111)
T 2dce_A 18 QEIEIDRNIIQEEEKQAIPEFFEGRQAKTPERYLKIRNYILDQWEICKPKYLNKTSVRPGLKNC--GDVNCIGRIHTYLE 95 (111)
T ss_dssp SCCCCCSSCCCHHHHTTSGGGGSCCSSCCHHHHHHHHHHHHHHHHHHTTSCCCGGGTTTTTSSS--SCHHHHHHHHHHHH
T ss_pred cccccCcccCCHHHHHhChHHhcCCcccCHHHHHHHHHHHHHHHHhCCcceeeHHHHHHhcccc--cCHHHHHHHHHHHH
Confidence 368899999999999999998764 246888999999999999999999999999999888632 68899999999999
Q ss_pred HhhHHhcCCccc
Q psy6038 119 RHGYINFGIFQR 130 (661)
Q Consensus 119 ~~~~~~~~~~~~ 130 (661)
++|+||||+.+.
T Consensus 96 ~wGLIN~~~~~~ 107 (111)
T 2dce_A 96 LIGAINFGCEQA 107 (111)
T ss_dssp HHSSSSCSCTTS
T ss_pred HcCeeecCCChh
Confidence 999999998653
No 39
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.19 E-value=2.8e-11 Score=131.95 Aligned_cols=105 Identities=24% Similarity=0.245 Sum_probs=85.3
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHhc--ccc----CCCC-cchhhHHHHHHHHHHhhHHhcCCccccCCCCCCCCCcEEEE
Q psy6038 73 HIRNRILQMWLENPKVQLTLEFVMQ--KIE----SPFN-SEVQLVSRLHCYLERHGYINFGIFQRITPIPVKKSGKVIVI 145 (661)
Q Consensus 73 ~irn~~~~~~~~np~~~~~~~~~~~--~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ii 145 (661)
+++.++..+...||++.+|.+.|.. .|. .... ++++.|+.+++|+.++.+.+ ++.+... +.....++|+||
T Consensus 51 ~~~~A~~~~~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~~v~I~~le~~~~~~~~~~-~~~~~~~-~~~~~~~~V~II 128 (456)
T 2vdc_G 51 RLEEAYEVSQATNNFPEICGRICPQDRLCEGNCVIEQSTHGAVTIGSVEKYINDTAWDQ-GWVKPRT-PSRELGLSVGVI 128 (456)
T ss_dssp CHHHHHHHHHHHCSCHHHHHHHCCGGGSGGGGCGGGGSSSCSCCHHHHHHHHHHHHHHH-TCCCCCC-SCSSCCCCEEEE
T ss_pred CHHHHHHHHHhhCCCCccccccCCCCcchHHhcccCCCCCCCccHHHHHHHHHHHHHHc-CCCCCCC-CcCCCCCEEEEE
Confidence 4566777788899999999998876 232 2223 68999999999999998887 6653322 233567899999
Q ss_pred ccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 146 GAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 146 G~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
|||+|||+||++|++.|++|+|+|+.+.+||.+.
T Consensus 129 GgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 129 GAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp CCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 9999999999999999999999999999999743
No 40
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.01 E-value=6.7e-10 Score=132.84 Aligned_cols=151 Identities=18% Similarity=0.219 Sum_probs=102.7
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHhc--cccCCC-----CcchhhHHHHHHHHHHhhHHhcCCccccCCC-------CCCC
Q psy6038 73 HIRNRILQMWLENPKVQLTLEFVMQ--KIESPF-----NSEVQLVSRLHCYLERHGYINFGIFQRITPI-------PVKK 138 (661)
Q Consensus 73 ~irn~~~~~~~~np~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 138 (661)
+++.++..++..||++.+|.+.|.. .|...+ .++|+.|+.+++|+.++...+ ++.....+. +...
T Consensus 108 ~~~~A~~~~~~~n~~p~~~grvCp~~~~Ce~~C~~~~~~~~pv~I~~le~~~~d~~~~~-~~~~~~~p~~~~~~~~~~~~ 186 (1025)
T 1gte_A 108 NYYGAAKMIFSDNPLGLTCGMVCPTSDLCVGGCNLYATEEGSINIGGLQQFASEVFKAM-NIPQIRNPCLPSQEKMPEAY 186 (1025)
T ss_dssp CHHHHHHHHHHHCTTHHHHHHHCCGGGSGGGGCGGGGSTTCCCCHHHHHHHHHHHHHHH-TCCCCCCTTSCCGGGSCGGG
T ss_pred CHHHHHHHHHhcCChhHhhcCCCCChhhHHhhCccCCCCCCCccHhHHHHHHHHHHHHh-CCccccCccccccccCCccC
Confidence 3566777788999999999999874 333222 247999999999999987665 554322211 2235
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCCCCCCcee----ccCCCc--------cccccccEEEeCCCCChhhH
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARERVGGRIV----TFKKSN--------YVADLGAMVVTGLGGNPINI 205 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~~~GG~i~----t~~~~~--------~~~d~G~~~i~~~~~~~~~~ 205 (661)
.++|+|||||+|||+||.+|++.|+ +|+|+|+.+.+||... .++.+. ..-+.|..++.+.....
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 7899999999999999999999999 7999999999999742 233321 12346777776553210
Q ss_pred HHHhhChhhhhhcCCCcEEecCCC
Q psy6038 206 LARQINMELLKIGHQCPLYQSSAE 229 (661)
Q Consensus 206 l~~~lgl~~~~~~~~~~~~~~~G~ 229 (661)
+.+.++.......+.++.+.|.
T Consensus 264 --~~v~~~~~~~~~~d~vvlAtGa 285 (1025)
T 1gte_A 264 --NEITLNTLKEEGYKAAFIGIGL 285 (1025)
T ss_dssp --TSBCHHHHHHTTCCEEEECCCC
T ss_pred --ceEEhhhcCccCCCEEEEecCC
Confidence 1111111111245678888887
No 41
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=98.95 E-value=4e-09 Score=117.93 Aligned_cols=46 Identities=28% Similarity=0.401 Sum_probs=42.5
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKK 183 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~ 183 (661)
..+||+|||+|+.|-..|..|++.|.+|+++|+++..||.+.++.+
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l 52 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSF 52 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECH
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccH
Confidence 4689999999999999999999999999999999999999877553
No 42
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.90 E-value=1.2e-08 Score=110.81 Aligned_cols=42 Identities=29% Similarity=0.430 Sum_probs=38.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCCCCCCcee
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARERVGGRIV 179 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~~~GG~i~ 179 (661)
...||+|||||++||+||++|+++|+ +|+|+|+....||...
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~~~ 47 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAISA 47 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcc
Confidence 45799999999999999999999999 9999999999887543
No 43
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.86 E-value=1.3e-09 Score=113.56 Aligned_cols=87 Identities=22% Similarity=0.251 Sum_probs=68.1
Q ss_pred cCCCCCCCHHHHhccccCCCCcchhhHHHHHHHHHHhhHHhcCCccccCCCCCCCCCcEEEEccChHHHHHHHHHHH--C
Q psy6038 84 ENPKVQLTLEFVMQKIESPFNSEVQLVSRLHCYLERHGYINFGIFQRITPIPVKKSGKVIVIGAGISGLAAARHMEQ--F 161 (661)
Q Consensus 84 ~np~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iiG~G~aGl~aa~~l~~--~ 161 (661)
.+|....+.+.|.......+...|+....+.+++.+..+... .....+||+|||||||||+||++|++ .
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~DV~IIGaGPAGlsAA~~la~~r~ 89 (326)
T 3fpz_A 19 STPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDL---------DKFAVSDVIIVGAGSSGLSAAYVIAKNRP 89 (326)
T ss_dssp GSCCCCTTTTTCCSTTCTTCCCCCCCHHHHHHHHHHHHHHHH---------HHTTEESEEEECCSHHHHHHHHHHHHHCT
T ss_pred cCCchhhhhhhcccccccccccCCccHHHHHHHHHHHHHhhh---------hhccCCCEEEECCCHHHHHHHHHHHHhCC
Confidence 577777777666655555566778888888888877655441 12346899999999999999999974 5
Q ss_pred CCcEEEEcCCCCCCCcee
Q psy6038 162 GIEVVVLEARERVGGRIV 179 (661)
Q Consensus 162 g~~v~v~e~~~~~GG~i~ 179 (661)
|++|+|+|+++.+||.+.
T Consensus 90 G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 90 DLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TSCEEEECSSSSCCTTTT
T ss_pred CCeEEEEECCCCCCceEE
Confidence 999999999999999865
No 44
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.80 E-value=8.3e-08 Score=110.06 Aligned_cols=40 Identities=20% Similarity=0.218 Sum_probs=36.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
..+||+|||||++||+||+.|+++|++|+|+|+++.+|+.
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~g 310 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALG 310 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCccccc
Confidence 3489999999999999999999999999999999888853
No 45
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.77 E-value=5e-08 Score=103.33 Aligned_cols=42 Identities=31% Similarity=0.376 Sum_probs=37.3
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
...++|+|||||++||+||++|+ +|++|+|+|+++.+|+...
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g~~as 48 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPGYHST 48 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTTSSGG
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCcccccc
Confidence 34689999999999999999999 6999999999998886543
No 46
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.76 E-value=9.5e-08 Score=100.55 Aligned_cols=40 Identities=48% Similarity=0.600 Sum_probs=36.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCce
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRI 178 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i 178 (661)
.+||+|||||++|++||++|+++|++|+|+|+++.+|+..
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~ 43 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGT 43 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCST
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcc
Confidence 4799999999999999999999999999999998887643
No 47
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.75 E-value=1.3e-07 Score=108.57 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=37.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCce
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRI 178 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i 178 (661)
..+||+|||||++||+||+.|+++|++|+|+|+++.+|+..
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~ga 303 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGA 303 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSG
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCcccccc
Confidence 45899999999999999999999999999999999888653
No 48
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.74 E-value=4.7e-08 Score=105.16 Aligned_cols=42 Identities=29% Similarity=0.497 Sum_probs=37.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
..+||+|||||++||+||+.|++.|++|+|+|+.+.+|+.+.
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~ 67 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIR 67 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeE
Confidence 467999999999999999999999999999999999988653
No 49
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.64 E-value=2e-07 Score=99.92 Aligned_cols=41 Identities=44% Similarity=0.549 Sum_probs=34.4
Q ss_pred CCCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 135 PVKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 135 ~~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
...+.++|+|||||++||++|+.|++.|++|+|+|+.+.++
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~ 59 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIK 59 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC-
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 34556899999999999999999999999999999997654
No 50
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.56 E-value=4.5e-07 Score=96.88 Aligned_cols=37 Identities=32% Similarity=0.537 Sum_probs=34.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..++|+|||||++||++|..|++.|++|+|+|+++.+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 3579999999999999999999999999999998764
No 51
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.55 E-value=2.5e-07 Score=100.68 Aligned_cols=42 Identities=36% Similarity=0.525 Sum_probs=37.8
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCce
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRI 178 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i 178 (661)
...+||+|||||++||+||..|++.|.+|+|+|+.+.+|+.+
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~ 65 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKL 65 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCcee
Confidence 455899999999999999999999999999999999888653
No 52
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.55 E-value=4.7e-07 Score=96.80 Aligned_cols=41 Identities=34% Similarity=0.494 Sum_probs=37.0
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
...++|+|||||++||++|..|++.|++|+|+|+++.++.+
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~ 64 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR 64 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc
Confidence 34579999999999999999999999999999999887654
No 53
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.53 E-value=6.6e-07 Score=95.55 Aligned_cols=36 Identities=33% Similarity=0.516 Sum_probs=33.3
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
.+|+||||||+||++|..|+++|++|+|||+.+.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~ 37 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAAS 37 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCC
Confidence 589999999999999999999999999999987653
No 54
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.39 E-value=8.6e-08 Score=105.68 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=68.9
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHhc----ccc--CCCCcchhhHHHHHHHHHHhhHHhcCCc-------cccCCCCCCCCC
Q psy6038 74 IRNRILQMWLENPKVQLTLEFVMQ----KIE--SPFNSEVQLVSRLHCYLERHGYINFGIF-------QRITPIPVKKSG 140 (661)
Q Consensus 74 irn~~~~~~~~np~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 140 (661)
..+.+..+...||.+.+|.+.|.. |+. .+-...++.+..++++++.....+.-.. ++.........+
T Consensus 14 ~~~a~~~~~~~~~~~~~~~rvc~~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (497)
T 2bry_A 14 STNPAHDHFETFVQAQLCQDVLSSFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNT 93 (497)
T ss_dssp -CCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCC
Confidence 334455556789999999999975 221 1112567778788776544222110000 111122234578
Q ss_pred cEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 141 KVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 141 ~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
+|+|||||++||++|..|++.|++|+|+|+++.+|+
T Consensus 94 dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 94 KCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred CEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 999999999999999999999999999999998874
No 55
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.36 E-value=1.4e-06 Score=97.45 Aligned_cols=38 Identities=29% Similarity=0.377 Sum_probs=33.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
...+|+|||||++||++|+.|++.|++|+|+|+.+.++
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 45799999999999999999999999999999987764
No 56
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.36 E-value=1.8e-06 Score=92.64 Aligned_cols=38 Identities=21% Similarity=0.447 Sum_probs=35.1
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCc--EEEEcCCCCCCCc
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIE--VVVLEARERVGGR 177 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~--v~v~e~~~~~GG~ 177 (661)
++|+|||||+|||+||..|++.|++ |+|+|+.+.++..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~ 42 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD 42 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBC
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcC
Confidence 5899999999999999999999997 9999999987754
No 57
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.34 E-value=2.7e-07 Score=97.92 Aligned_cols=39 Identities=31% Similarity=0.635 Sum_probs=36.3
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
.+||+|||||||||+||+.|+++|++|+|+|+++.+|..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~ 42 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP 42 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC
Confidence 479999999999999999999999999999999988753
No 58
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.33 E-value=5.2e-08 Score=107.93 Aligned_cols=106 Identities=16% Similarity=0.212 Sum_probs=69.8
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHhccccCCCCcc-----h--hhHHH-HHHHHHHhhHH-hcCCccc-----cCCCCCCC
Q psy6038 73 HIRNRILQMWLENPKVQLTLEFVMQKIESPFNSE-----V--QLVSR-LHCYLERHGYI-NFGIFQR-----ITPIPVKK 138 (661)
Q Consensus 73 ~irn~~~~~~~~np~~~~~~~~~~~~~~~~~~~~-----~--~~~~~-~~~~~~~~~~~-~~~~~~~-----~~~~~~~~ 138 (661)
.|+..+++.+..++......+..++++++|.... . +.+.. -...+.+..-. ....... ....+...
T Consensus 27 ~l~~~~~~~l~~~~~~~~~~~i~~~sidar~~~~~~~~~~v~v~~~~~~~~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 3nlc_A 27 ALLDAITKKLGIPAEKVISFNVFRRGYDARKKTNIHLIYTLDIIVEGDETALLAKFANDPHVRQTPDMEYKFVAKAPENL 106 (549)
T ss_dssp HHHHHHHHHHCCCGGGEEEEEEEEEEECCC----CEEEEEEEEEESSCHHHHHHTTTTCTTEEECCCCCCCCCCCCCTTC
T ss_pred HHHHHHHHHhCCCHHHCCeEEEEEeecccCCCCCceEEEEEEEEEccchhHHHHhhccCcccccccccCCCCcCcCccCC
Confidence 7999999999998887777888889998884211 0 11111 11222221100 0011111 11112334
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCce
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRI 178 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i 178 (661)
.+||+|||||++||+||+.|++.|++|+|+|+.+.+++|+
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~ 146 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERT 146 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccc
Confidence 5899999999999999999999999999999999998865
No 59
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.32 E-value=1.5e-06 Score=93.44 Aligned_cols=40 Identities=30% Similarity=0.480 Sum_probs=36.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCc--EEEEcCCCCCCCc
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIE--VVVLEARERVGGR 177 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~--v~v~e~~~~~GG~ 177 (661)
+.++|+|||||+|||+||..|++.|++ |+|+|+.+.++..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~ 49 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYE 49 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcC
Confidence 457999999999999999999999997 9999999887654
No 60
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.32 E-value=9.7e-07 Score=98.27 Aligned_cols=38 Identities=34% Similarity=0.641 Sum_probs=35.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
...+|+|||||++||++|+.|++.|++|+|+|+++.++
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~ 41 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLS 41 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 35799999999999999999999999999999998765
No 61
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.31 E-value=6.3e-07 Score=99.49 Aligned_cols=75 Identities=12% Similarity=0.106 Sum_probs=55.6
Q ss_pred cchhhHHHHHHHHHHhhHHh-cCCccccCCCCCCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 105 SEVQLVSRLHCYLERHGYIN-FGIFQRITPIPVKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
+.++.|+..++|+.+..... .|-......+.....++|+|||||++|++||++|++.|++|+|+|+.+.+||.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 83 (523)
T 1mo9_A 8 NDHLTINQWATRIDEILEAPDGGEVIYNVDENDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCP 83 (523)
T ss_dssp TCCCCHHHHHHHHHHHHHCTTCCCEEEECCTTCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHH
T ss_pred cchhhccchhhhhHHHhhccccchhhhccCCCCCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCccc
Confidence 67888998877765432221 1222222222345568999999999999999999999999999999998999754
No 62
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.28 E-value=2.8e-06 Score=93.91 Aligned_cols=36 Identities=31% Similarity=0.340 Sum_probs=33.5
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
.++|+|||||++||+||+.|++.|++|+|+|+.+..
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~ 42 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFP 42 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCC
Confidence 479999999999999999999999999999998743
No 63
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.28 E-value=2.9e-06 Score=90.86 Aligned_cols=39 Identities=18% Similarity=0.371 Sum_probs=35.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCCCCCCc
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI--EVVVLEARERVGGR 177 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~~~GG~ 177 (661)
+++|+|||||+|||+||..|++.|+ +|+|+|+++..+..
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~ 41 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQ 41 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBC
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCC
Confidence 3689999999999999999999999 89999999876653
No 64
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.26 E-value=5.5e-07 Score=92.71 Aligned_cols=41 Identities=27% Similarity=0.440 Sum_probs=37.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
..+||+|||||+|||+||.+|++.|++|+|+|+ +.+||.+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~ 45 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMA 45 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeee
Confidence 468999999999999999999999999999998 57888764
No 65
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.24 E-value=4.3e-06 Score=98.04 Aligned_cols=37 Identities=27% Similarity=0.464 Sum_probs=33.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~~~ 174 (661)
...||+|||||++|+++|++|+++|+ +|+|+|++...
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~ 40 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLN 40 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCC
Confidence 35799999999999999999999999 99999999874
No 66
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.22 E-value=7.5e-07 Score=91.60 Aligned_cols=42 Identities=26% Similarity=0.396 Sum_probs=35.8
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC----CCCceec
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER----VGGRIVT 180 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~----~GG~i~t 180 (661)
.+||+|||||||||+||.+|+++|++|+|+|+... +||++++
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~ 49 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTT 49 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCC
Confidence 47999999999999999999999999999999753 4455443
No 67
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.20 E-value=6.7e-07 Score=92.80 Aligned_cols=46 Identities=26% Similarity=0.372 Sum_probs=39.4
Q ss_pred CCCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcC----CCCCCCceec
Q psy6038 135 PVKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEA----RERVGGRIVT 180 (661)
Q Consensus 135 ~~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~----~~~~GG~i~t 180 (661)
...+.++|+|||||++||+||+.|++.|++|+|+|+ ...+||.+..
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~ 67 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT 67 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc
Confidence 345678999999999999999999999999999999 5589998764
No 68
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.15 E-value=1.1e-06 Score=90.08 Aligned_cols=41 Identities=24% Similarity=0.331 Sum_probs=35.0
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCce
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRI 178 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i 178 (661)
.+.+||+|||||||||+||.+|+++|++|+|+|+. .+||.+
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~ 44 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRV 44 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGG
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCee
Confidence 34689999999999999999999999999999986 456653
No 69
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.12 E-value=2.5e-07 Score=95.30 Aligned_cols=40 Identities=35% Similarity=0.560 Sum_probs=37.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCCCCCCce
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQF--GIEVVVLEARERVGGRI 178 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~~~GG~i 178 (661)
..||+|||||++||+||+.|++. |++|+|+|+++.+||..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 46999999999999999999998 99999999999998743
No 70
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.08 E-value=1.7e-06 Score=95.23 Aligned_cols=43 Identities=35% Similarity=0.554 Sum_probs=38.2
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.+.+||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 3468999999999999999999999999999999999999754
No 71
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.08 E-value=2e-06 Score=89.04 Aligned_cols=42 Identities=26% Similarity=0.509 Sum_probs=37.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCCCCCCcee
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQF--GIEVVVLEARERVGGRIV 179 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~~~GG~i~ 179 (661)
..+||+|||||++||+||+.|+++ |++|+|+|+...+||.++
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~ 121 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW 121 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc
Confidence 357999999999999999999997 999999999999987543
No 72
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.07 E-value=3e-05 Score=83.70 Aligned_cols=38 Identities=16% Similarity=0.399 Sum_probs=34.5
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI--EVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~~~GG 176 (661)
.++|+|||||++|++||..|++.|+ +|+|+|+.+.++.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~ 43 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPH 43 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCB
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCC
Confidence 5799999999999999999999999 7999999877553
No 73
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.06 E-value=2.7e-06 Score=94.83 Aligned_cols=49 Identities=33% Similarity=0.438 Sum_probs=42.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCcc
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSNY 186 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~~ 186 (661)
...+|+|||||++||+||..|++.|++|+|+|+++.+||.+...+.++.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~ 63 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGA 63 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCce
Confidence 3579999999999999999999999999999999999998755444443
No 74
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.06 E-value=2.6e-06 Score=97.73 Aligned_cols=45 Identities=42% Similarity=0.680 Sum_probs=41.3
Q ss_pred CCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceec
Q psy6038 136 VKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVT 180 (661)
Q Consensus 136 ~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t 180 (661)
....++|+|||||+|||+||+.|++.|++|+|+|+++.+||.+..
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 456789999999999999999999999999999999999998654
No 75
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.05 E-value=2.3e-06 Score=95.29 Aligned_cols=53 Identities=34% Similarity=0.441 Sum_probs=45.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCcccccc
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSNYVADL 190 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~~~~d~ 190 (661)
...+|+|||||++||+||..|++.|++|+|+|+++.+||.+...+.++...|.
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv 72 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDV 72 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSS
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCC
Confidence 45799999999999999999999999999999999999987766666654443
No 76
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.05 E-value=2e-06 Score=88.88 Aligned_cols=41 Identities=24% Similarity=0.330 Sum_probs=38.8
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.++|+|||||+|||+||..|++.|++|+|+|+++.+||.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~ 47 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLS 47 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeh
Confidence 47899999999999999999999999999999999999874
No 77
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.05 E-value=2.5e-06 Score=87.69 Aligned_cols=41 Identities=22% Similarity=0.411 Sum_probs=37.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceec
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVT 180 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t 180 (661)
..++|+|||||++||+||+.|++.|++|+|+|++ +||.+..
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 3579999999999999999999999999999998 8998654
No 78
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.04 E-value=3e-06 Score=94.32 Aligned_cols=53 Identities=32% Similarity=0.421 Sum_probs=45.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCcccccc
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSNYVADL 190 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~~~~d~ 190 (661)
...+|+|||||+|||+||++|++.|++|+|+|+++.+||.+...+.++..+|.
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~ 60 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDT 60 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecC
Confidence 45799999999999999999999999999999999999987766666554443
No 79
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.04 E-value=3.4e-06 Score=91.57 Aligned_cols=42 Identities=33% Similarity=0.443 Sum_probs=38.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCCCCCCcee
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI--EVVVLEARERVGGRIV 179 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~~~GG~i~ 179 (661)
..++|+|||||++||+||..|++.|+ +|+|||+++.+||.+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~ 48 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN 48 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec
Confidence 45799999999999999999999999 9999999999999654
No 80
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.04 E-value=2.8e-06 Score=89.93 Aligned_cols=41 Identities=27% Similarity=0.353 Sum_probs=36.6
Q ss_pred CCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 136 VKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 136 ~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
....+||+|||||++|++||+.|++.|++|+|+|+....+|
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g 54 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGR 54 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTT
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcc
Confidence 34568999999999999999999999999999999876555
No 81
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.03 E-value=2.5e-06 Score=87.51 Aligned_cols=42 Identities=33% Similarity=0.463 Sum_probs=38.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEE-EcCCCCCCCceec
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVV-LEARERVGGRIVT 180 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v-~e~~~~~GG~i~t 180 (661)
..++|+|||||+|||+||..|++.|++|+| +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 357999999999999999999999999999 999 788998643
No 82
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.01 E-value=2.5e-06 Score=88.50 Aligned_cols=41 Identities=24% Similarity=0.444 Sum_probs=38.6
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.++|+|||||++||+||+.|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 45 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLT 45 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 47899999999999999999999999999999999999864
No 83
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.01 E-value=3e-06 Score=89.08 Aligned_cols=42 Identities=24% Similarity=0.442 Sum_probs=39.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
..++|+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 54 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLA 54 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccc
Confidence 357999999999999999999999999999999999999864
No 84
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.99 E-value=3.3e-06 Score=87.34 Aligned_cols=42 Identities=31% Similarity=0.457 Sum_probs=38.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceec
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVT 180 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t 180 (661)
..++|+|||||++||+||..|++.|++|+|+|++ .+||.+..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 48 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW 48 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc
Confidence 3579999999999999999999999999999999 78998654
No 85
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.98 E-value=4.2e-06 Score=87.28 Aligned_cols=41 Identities=39% Similarity=0.600 Sum_probs=38.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.++|+|||||++||+||+.|++.|++|+|+|+++.+||.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~ 43 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQ 43 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc
Confidence 36899999999999999999999999999999999998754
No 86
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.98 E-value=4.1e-06 Score=89.00 Aligned_cols=39 Identities=31% Similarity=0.635 Sum_probs=36.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
.+||+|||||++||+||+.|++.|++|+|+|+++.+|+.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~ 42 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP 42 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC
Confidence 368999999999999999999999999999999988763
No 87
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.98 E-value=3.5e-06 Score=85.64 Aligned_cols=40 Identities=33% Similarity=0.576 Sum_probs=37.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHC-CCcEEEEcCCCCCCCce
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQF-GIEVVVLEARERVGGRI 178 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~-g~~v~v~e~~~~~GG~i 178 (661)
.+||+|||||++||+||+.|++. |.+|+|+|+.+.+||.+
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 46899999999999999999997 99999999999998743
No 88
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.98 E-value=5.9e-06 Score=95.29 Aligned_cols=45 Identities=33% Similarity=0.577 Sum_probs=41.4
Q ss_pred CCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceec
Q psy6038 136 VKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVT 180 (661)
Q Consensus 136 ~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t 180 (661)
....++|+|||||+|||+||+.|++.|++|+|+|+.+.+||.+..
T Consensus 386 ~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 386 TKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred ccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 456789999999999999999999999999999999999998654
No 89
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.98 E-value=1.2e-06 Score=98.24 Aligned_cols=96 Identities=23% Similarity=0.262 Sum_probs=63.5
Q ss_pred HHhcCCCCCCC-HH-HHhccccCCCCcchhhHHHHHHHHHHhhHHhcCCccccCCC-------------CCCCCCcEEEE
Q psy6038 81 MWLENPKVQLT-LE-FVMQKIESPFNSEVQLVSRLHCYLERHGYINFGIFQRITPI-------------PVKKSGKVIVI 145 (661)
Q Consensus 81 ~~~~np~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~v~ii 145 (661)
+...||.+... .+ .|..|-... ...++.+..+|+|..+..... .+.....+. .....++|+||
T Consensus 55 ~~~~np~~~~~~g~v~C~~Ch~~~-~~~~~~c~~ch~~~~d~p~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vi 132 (572)
T 1d4d_A 55 KDKVSPHKSHLIGEIACTSCHKGH-EKSVAYCDACHSFGFDMPFGG-KWERKFVPVDADKAAQDKAIAAGVKETTDVVII 132 (572)
T ss_dssp ---CBTTBSSCCSCCCGGGTSCSS-SCCCCGGGGTCCCCCCCTTCC-CCCCCCCCTTSSHHHHHHHHHSCCCEECSEEEE
T ss_pred ccccCCchhhcCCCCCcccccccc-cCCCCcccccccccccCCCcc-ccccCCccccccHHHHHHHhhccCCCCCCEEEE
Confidence 34468887662 33 575554433 356778888888743322222 222221110 01235799999
Q ss_pred ccChHHHHHHHHHHHCCCcEEEEcCCCCCCCce
Q psy6038 146 GAGISGLAAARHMEQFGIEVVVLEARERVGGRI 178 (661)
Q Consensus 146 G~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i 178 (661)
|||++||+||..|++.|++|+|+|+.+.+||..
T Consensus 133 G~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~ 165 (572)
T 1d4d_A 133 GSGGAGLAAAVSARDAGAKVILLEKEPIPGGNT 165 (572)
T ss_dssp CCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTG
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEecCCCCCcch
Confidence 999999999999999999999999999999864
No 90
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.96 E-value=3.6e-06 Score=92.42 Aligned_cols=40 Identities=38% Similarity=0.575 Sum_probs=37.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.+||+|||||++||+||++|++.|++|+|+|+ +.+||.+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 65 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCV 65 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCcee
Confidence 47999999999999999999999999999999 78998754
No 91
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.96 E-value=4.5e-06 Score=86.05 Aligned_cols=42 Identities=29% Similarity=0.514 Sum_probs=37.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceec
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVT 180 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t 180 (661)
..++|+|||||++||+||+.|++.|++|+|+|+ ..+||.+..
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 56 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAE 56 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccc
Confidence 357899999999999999999999999999999 578887653
No 92
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.96 E-value=3.7e-06 Score=91.85 Aligned_cols=41 Identities=27% Similarity=0.463 Sum_probs=38.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.+||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 47999999999999999999999999999999999999865
No 93
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.95 E-value=4.4e-06 Score=89.04 Aligned_cols=37 Identities=38% Similarity=0.503 Sum_probs=34.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
..||+|||||++||+||+.|+++|++|+|+|+.+..+
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFN 40 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 4699999999999999999999999999999988765
No 94
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.94 E-value=4.8e-06 Score=92.55 Aligned_cols=50 Identities=22% Similarity=0.419 Sum_probs=43.6
Q ss_pred CCcEEEEccChHHHHHHHHHH-HCCCcEEEEcCCCCCCCceeccCCCcccc
Q psy6038 139 SGKVIVIGAGISGLAAARHME-QFGIEVVVLEARERVGGRIVTFKKSNYVA 188 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~-~~g~~v~v~e~~~~~GG~i~t~~~~~~~~ 188 (661)
..+|+|||||++||+||..|+ +.|++|+|+|+++.+||.+...+.++...
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~ 58 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALS 58 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCcee
Confidence 468999999999999999999 99999999999999999876655555433
No 95
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.94 E-value=6e-06 Score=90.08 Aligned_cols=41 Identities=32% Similarity=0.543 Sum_probs=38.4
Q ss_pred CcEEEEccChHHHHHHHHHHH---CCCc---EEEEcCCCCCCCceec
Q psy6038 140 GKVIVIGAGISGLAAARHMEQ---FGIE---VVVLEARERVGGRIVT 180 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~---~g~~---v~v~e~~~~~GG~i~t 180 (661)
++|+|||||+|||+||..|++ .|++ |+|+|+++.+||.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 689999999999999999999 9999 9999999999997653
No 96
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.93 E-value=6.5e-06 Score=87.26 Aligned_cols=37 Identities=30% Similarity=0.487 Sum_probs=34.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
..||+|||||++|+++|++|+++|++|+|+|+.+..+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 5799999999999999999999999999999988766
No 97
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.92 E-value=5.6e-06 Score=88.50 Aligned_cols=41 Identities=32% Similarity=0.639 Sum_probs=37.6
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.+||+|||||++||+||+.|++.|.+|+|+|+++.+|+.+.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~ 44 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKIL 44 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcE
Confidence 47899999999999999999999999999999999987543
No 98
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.92 E-value=4.7e-06 Score=91.06 Aligned_cols=41 Identities=32% Similarity=0.561 Sum_probs=38.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.++|+|||||++|++||.+|++.|++|+|+|+.+.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 46899999999999999999999999999999999999754
No 99
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.92 E-value=4.2e-06 Score=91.30 Aligned_cols=40 Identities=33% Similarity=0.522 Sum_probs=37.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.+||+|||||++||+||++|++.|++|+|+|+ +.+||.+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 44 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCV 44 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCccc
Confidence 47999999999999999999999999999999 88999654
No 100
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.92 E-value=5.2e-06 Score=87.49 Aligned_cols=39 Identities=26% Similarity=0.353 Sum_probs=36.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
..||+|||||++||++|++|+++|++|+|+|+++..+|.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~ 40 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQH 40 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCC
Confidence 468999999999999999999999999999999887664
No 101
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.92 E-value=7e-06 Score=90.92 Aligned_cols=43 Identities=40% Similarity=0.626 Sum_probs=37.9
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC--------CCCCcee
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE--------RVGGRIV 179 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~--------~~GG~i~ 179 (661)
...+||+|||||+|||+||..|++.|++|+|+|+++ .+||.+.
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~ 80 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCV 80 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccC
Confidence 446899999999999999999999999999999965 6787653
No 102
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.91 E-value=6.4e-06 Score=91.01 Aligned_cols=41 Identities=37% Similarity=0.550 Sum_probs=38.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCce
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRI 178 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i 178 (661)
...||+|||||++||+||..|++.|++|+|+||.+.+||..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGAT 80 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 45799999999999999999999999999999999999864
No 103
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.91 E-value=7.1e-06 Score=91.98 Aligned_cols=41 Identities=29% Similarity=0.548 Sum_probs=38.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCce
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRI 178 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i 178 (661)
...||+|||||+|||+||..|++.|++|+|+|+.+.+||..
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s 165 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNA 165 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCch
Confidence 45799999999999999999999999999999999999864
No 104
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.90 E-value=7.1e-06 Score=89.81 Aligned_cols=41 Identities=34% Similarity=0.498 Sum_probs=37.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCce
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRI 178 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i 178 (661)
..+||+|||||++||+||.+|++.|++|+|+|+++.+||+.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 35899999999999999999999999999999999777764
No 105
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.89 E-value=9.1e-06 Score=86.08 Aligned_cols=38 Identities=29% Similarity=0.432 Sum_probs=35.6
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
.++|+|||||++||++|..|++.|++|+|+|+++.+++
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~ 48 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA 48 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 57999999999999999999999999999999988764
No 106
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.89 E-value=9.3e-06 Score=85.40 Aligned_cols=39 Identities=26% Similarity=0.402 Sum_probs=35.0
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
...||+|||||++|+++|++|+++|++|+|+|+....+|
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 457999999999999999999999999999999875444
No 107
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.89 E-value=7.6e-06 Score=89.40 Aligned_cols=42 Identities=31% Similarity=0.588 Sum_probs=39.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
..++|+|||||++|++||..|++.|++|+|+|+.+.+||.+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 468999999999999999999999999999999999999754
No 108
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.87 E-value=1.1e-05 Score=85.46 Aligned_cols=38 Identities=37% Similarity=0.677 Sum_probs=34.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..+||+|||||++|+++|++|+++|++|+|+|++. +|+
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~-~~~ 41 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF-IGS 41 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS-TTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC-CCC
Confidence 35799999999999999999999999999999984 554
No 109
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.87 E-value=8e-06 Score=87.66 Aligned_cols=36 Identities=33% Similarity=0.470 Sum_probs=33.5
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
.+||+|||||++||++|+.|++.|++|+|+|+++.+
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~ 40 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFP 40 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 479999999999999999999999999999998754
No 110
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.84 E-value=9.1e-06 Score=82.45 Aligned_cols=38 Identities=29% Similarity=0.445 Sum_probs=34.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
.++|+|||||++||+||..|++.|++|+|+|+++..|+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~ 39 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNR 39 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccc
Confidence 36899999999999999999999999999999865443
No 111
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=97.84 E-value=1e-05 Score=86.22 Aligned_cols=40 Identities=43% Similarity=0.580 Sum_probs=35.4
Q ss_pred CCCCcEEEEccChHHHHHHHHHHH-CC-CcEEEEcCCCCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQ-FG-IEVVVLEARERVGG 176 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~-~g-~~v~v~e~~~~~GG 176 (661)
....||+|||||++|+++|++|++ +| ++|+|+|+++..+|
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~~g 60 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGG 60 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCCCC
Confidence 446799999999999999999999 99 99999999984333
No 112
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.84 E-value=7.8e-06 Score=91.56 Aligned_cols=41 Identities=27% Similarity=0.527 Sum_probs=38.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCce
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRI 178 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i 178 (661)
...||+|||||++||+||..|+++|++|+|+|+.+.+||..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s 160 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNS 160 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 45799999999999999999999999999999999998853
No 113
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.84 E-value=1.1e-05 Score=82.61 Aligned_cols=40 Identities=30% Similarity=0.454 Sum_probs=36.3
Q ss_pred CcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCCCCCCceec
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGI-EVVVLEARERVGGRIVT 180 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~~~GG~i~t 180 (661)
++|+|||||++||+||..|++.|+ +|+|+|+. .+||.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~ 42 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITG 42 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccc
Confidence 589999999999999999999999 99999994 78887653
No 114
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.84 E-value=1.2e-05 Score=86.14 Aligned_cols=37 Identities=35% Similarity=0.595 Sum_probs=34.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCc-EEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIE-VVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~-v~v~e~~~~~G 175 (661)
..+|+|||||++||++|..|++.|++ |+|+|+++.++
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 47999999999999999999999999 99999998765
No 115
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.84 E-value=6.5e-06 Score=90.18 Aligned_cols=41 Identities=39% Similarity=0.661 Sum_probs=37.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
..+||+|||||++||+||..|++.|++|+|+|+. .+||.+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~ 59 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCV 59 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCccc
Confidence 4589999999999999999999999999999965 7888753
No 116
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.83 E-value=8.9e-06 Score=84.52 Aligned_cols=42 Identities=31% Similarity=0.479 Sum_probs=37.4
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
...++|+|||||++||+||..|++.|++|+|+|+. .+||.+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 53 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALM 53 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcee
Confidence 34679999999999999999999999999999975 7888754
No 117
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.83 E-value=8e-06 Score=88.85 Aligned_cols=40 Identities=38% Similarity=0.591 Sum_probs=37.7
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
+||+|||||++|++||.+|++.|++|+|+|+++.+||.+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 41 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCL 41 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccc
Confidence 5899999999999999999999999999999999999754
No 118
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.83 E-value=8.6e-06 Score=85.61 Aligned_cols=40 Identities=40% Similarity=0.706 Sum_probs=36.6
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~~~GG~i~ 179 (661)
.++|+|||||++||+||+.|++.|+ +|+|+|+++ +||.+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~ 44 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFK 44 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccc
Confidence 4689999999999999999999999 999999998 998543
No 119
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.83 E-value=6.4e-06 Score=90.12 Aligned_cols=42 Identities=36% Similarity=0.578 Sum_probs=38.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
..++|+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCL 46 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCccc
Confidence 347899999999999999999999999999999999999754
No 120
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.82 E-value=1.3e-05 Score=88.36 Aligned_cols=41 Identities=39% Similarity=0.556 Sum_probs=36.2
Q ss_pred CCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 136 VKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 136 ~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..+..+|+||||||+||++|..|++.|++|+|+|+++.++.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 48 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG 48 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 34568999999999999999999999999999999987653
No 121
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.82 E-value=9.6e-06 Score=89.09 Aligned_cols=42 Identities=38% Similarity=0.578 Sum_probs=37.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcC--------CCCCCCcee
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEA--------RERVGGRIV 179 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~--------~~~~GG~i~ 179 (661)
..+||+|||||+|||+||..|++.|++|+|+|+ +..+||.+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~ 54 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCV 54 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeec
Confidence 458999999999999999999999999999998 567888654
No 122
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.82 E-value=1e-05 Score=83.86 Aligned_cols=42 Identities=19% Similarity=0.365 Sum_probs=38.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcC----CCCCCCceec
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEA----RERVGGRIVT 180 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~----~~~~GG~i~t 180 (661)
.++|+|||||++||+||+.|++.|++|+|+|+ ...+||.+..
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 53 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT 53 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee
Confidence 46899999999999999999999999999999 6788887653
No 123
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.82 E-value=9.2e-06 Score=87.71 Aligned_cols=35 Identities=26% Similarity=0.496 Sum_probs=32.0
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
+.++|+|||||++||++|..|+++|++|+|+|+++
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45799999999999999999999999999999986
No 124
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.81 E-value=1.2e-05 Score=85.15 Aligned_cols=35 Identities=31% Similarity=0.451 Sum_probs=33.1
Q ss_pred CcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQF--GIEVVVLEARERV 174 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~~~ 174 (661)
++|+|||||++||++|..|++. |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4799999999999999999999 9999999998876
No 125
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.80 E-value=1.3e-05 Score=90.02 Aligned_cols=41 Identities=29% Similarity=0.639 Sum_probs=37.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHC------CCcEEEEcCCCCCCCce
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQF------GIEVVVLEARERVGGRI 178 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~------g~~v~v~e~~~~~GG~i 178 (661)
...||+|||||+|||+||..|++. |++|+|+|+.+.+|+.+
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 80 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHT 80 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTC
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCcc
Confidence 457999999999999999999999 99999999999998753
No 126
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.80 E-value=9.3e-06 Score=88.91 Aligned_cols=41 Identities=34% Similarity=0.622 Sum_probs=38.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 45 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCL 45 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccc
Confidence 46899999999999999999999999999999999998653
No 127
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.79 E-value=1.2e-05 Score=87.69 Aligned_cols=41 Identities=34% Similarity=0.489 Sum_probs=37.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
..++|+|||||++|++||.+|++.|++|+|+|++ .+||.+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~ 43 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCV 43 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCcccc
Confidence 3579999999999999999999999999999998 7898654
No 128
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.79 E-value=1.7e-05 Score=77.98 Aligned_cols=35 Identities=31% Similarity=0.466 Sum_probs=32.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
.++|+|||||++||.||..|++.|.+|+|+|++..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~ 37 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLD 37 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 47999999999999999999999999999999843
No 129
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.78 E-value=1.7e-05 Score=90.59 Aligned_cols=44 Identities=30% Similarity=0.496 Sum_probs=40.5
Q ss_pred CCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 136 VKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 136 ~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
....++|+|||||+|||+||..|++.|++|+|+|+++.+||.+.
T Consensus 370 ~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 370 AVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 34568999999999999999999999999999999999999864
No 130
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.78 E-value=9.6e-06 Score=88.33 Aligned_cols=40 Identities=33% Similarity=0.610 Sum_probs=37.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.+||+|||||+||++||.+|++.|++|+|+|+ +.+||.+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 47999999999999999999999999999999 78999865
No 131
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.78 E-value=1.5e-05 Score=87.83 Aligned_cols=39 Identities=36% Similarity=0.537 Sum_probs=35.6
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
+...+|+||||||+||++|..|++.|++|+|+|+++.++
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~ 48 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRT 48 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 467899999999999999999999999999999998765
No 132
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.78 E-value=1.2e-05 Score=82.79 Aligned_cols=40 Identities=23% Similarity=0.490 Sum_probs=36.3
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.++|+|||||++||+||+.|++.|++|+|+|+ ..+||.+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~ 44 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQLT 44 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECC-SSTTGGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEcc-CCCCceEe
Confidence 47899999999999999999999999999996 47888754
No 133
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.77 E-value=1.4e-05 Score=89.19 Aligned_cols=39 Identities=21% Similarity=0.320 Sum_probs=35.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
...+|+|||||++||++|..|++.|++|+|+|+++.+++
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~ 63 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTIT 63 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 346899999999999999999999999999999987754
No 134
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.77 E-value=2e-05 Score=88.29 Aligned_cols=39 Identities=26% Similarity=0.373 Sum_probs=35.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
+.++|+|||||++||+||+.|++.|++|+|+|+.+.+++
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~ 60 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY 60 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC
Confidence 358999999999999999999999999999999876543
No 135
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.77 E-value=9.8e-06 Score=84.79 Aligned_cols=37 Identities=30% Similarity=0.379 Sum_probs=33.6
Q ss_pred CcEEEEccChHHHHHHHHHHHCC------CcEEEEcCCCCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFG------IEVVVLEARERVGG 176 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g------~~v~v~e~~~~~GG 176 (661)
+||+|||||++||++|++|+++| ++|+|+|+....+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 48999999999999999999998 99999999875554
No 136
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.77 E-value=1.4e-05 Score=85.08 Aligned_cols=36 Identities=36% Similarity=0.541 Sum_probs=33.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..+|+|||||++||++|..|++.|++|+|+|+++..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 37 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPD 37 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 368999999999999999999999999999998754
No 137
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.76 E-value=1.5e-05 Score=88.93 Aligned_cols=41 Identities=29% Similarity=0.433 Sum_probs=37.5
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCce
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRI 178 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i 178 (661)
...||+|||||++|+++|+.|+++|++|+|+|+++..||..
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS 57 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTS 57 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcc
Confidence 35899999999999999999999999999999998877753
No 138
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.76 E-value=1.3e-05 Score=87.51 Aligned_cols=41 Identities=37% Similarity=0.637 Sum_probs=37.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
+.+||+|||||++|++||.+|++.|++|+|+|+. .+||.+.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCV 43 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCc
Confidence 3579999999999999999999999999999998 7888754
No 139
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.75 E-value=1.2e-05 Score=88.30 Aligned_cols=40 Identities=28% Similarity=0.429 Sum_probs=36.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.+||+|||||+|||+||.+|++.|++|+|+|++ .+||.|.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc~ 47 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTCA 47 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCccc
Confidence 479999999999999999999999999999996 4888753
No 140
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.75 E-value=1.6e-05 Score=87.08 Aligned_cols=34 Identities=35% Similarity=0.462 Sum_probs=31.7
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEA 170 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~ 170 (661)
...+||+|||||++||+||.+|++.|++|+|+|+
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk 40 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDF 40 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEe
Confidence 3568999999999999999999999999999995
No 141
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.75 E-value=1.3e-05 Score=88.16 Aligned_cols=41 Identities=32% Similarity=0.490 Sum_probs=37.1
Q ss_pred CCcEEEEccChHHHHHHHHHHH-CCCcEEEEc--------CCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQ-FGIEVVVLE--------ARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~-~g~~v~v~e--------~~~~~GG~i~ 179 (661)
.+||+|||||++|++||++|++ .|++|+|+| +++.+||.+.
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~ 52 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCV 52 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHH
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCcccc
Confidence 5799999999999999999999 999999999 4778899653
No 142
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.74 E-value=1.2e-05 Score=88.18 Aligned_cols=41 Identities=37% Similarity=0.673 Sum_probs=37.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
..+||+|||||++|++||.+|++.|++|+|+|++ .+||.+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 50 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCV 50 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHH
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCc
Confidence 3579999999999999999999999999999997 7888754
No 143
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.74 E-value=1.3e-05 Score=87.77 Aligned_cols=41 Identities=29% Similarity=0.494 Sum_probs=38.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 47899999999999999999999999999999999998654
No 144
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.74 E-value=1.1e-05 Score=87.49 Aligned_cols=40 Identities=30% Similarity=0.574 Sum_probs=36.8
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.+||+|||||++|++||++|++.|++|+|+|+. .+||.+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCV 43 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCccc
Confidence 479999999999999999999999999999997 7898754
No 145
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.73 E-value=1.7e-05 Score=84.57 Aligned_cols=36 Identities=33% Similarity=0.430 Sum_probs=33.6
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
.++|+|||||++||++|..|++.|++|+|+|+++.+
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 468999999999999999999999999999998765
No 146
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.71 E-value=2.4e-05 Score=86.18 Aligned_cols=38 Identities=34% Similarity=0.545 Sum_probs=34.6
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..||+|||||++|+++|+.|+++|++|+|+|+.+..+|
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 47999999999999999999999999999999875554
No 147
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.71 E-value=1.6e-05 Score=86.33 Aligned_cols=36 Identities=22% Similarity=0.539 Sum_probs=33.8
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..+|+|||||++||+||..|++.|++|+|+|+.+.+
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 479999999999999999999999999999998764
No 148
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.70 E-value=1.5e-05 Score=86.58 Aligned_cols=40 Identities=33% Similarity=0.560 Sum_probs=36.9
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.++|+|||||++|++||.+|++.|++|+|+|+. .+||.+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~ 42 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCL 42 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCc
Confidence 478999999999999999999999999999998 8898753
No 149
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.70 E-value=1.2e-05 Score=88.57 Aligned_cols=40 Identities=25% Similarity=0.489 Sum_probs=36.9
Q ss_pred CCcEEEEccChHHHHHHHHHHHC---CCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQF---GIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~---g~~v~v~e~~~~~GG~i~ 179 (661)
.+||+|||||++|++||++|++. |++|+|+|+.+ +||.+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~ 44 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAV 44 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCccc
Confidence 36899999999999999999999 99999999998 999754
No 150
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.70 E-value=1.9e-05 Score=84.48 Aligned_cols=38 Identities=29% Similarity=0.387 Sum_probs=34.6
Q ss_pred CCcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQF--GIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~~~GG 176 (661)
..||+|||||++|+++|+.|+++ |++|+|+|+....+|
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~ 75 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNE 75 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCT
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCc
Confidence 47999999999999999999999 999999999865554
No 151
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.69 E-value=2.3e-05 Score=80.15 Aligned_cols=38 Identities=34% Similarity=0.556 Sum_probs=34.7
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
++|+|||||++||+||..|++.|++|+|+|+ ++||.+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 5899999999999999999999999999985 5888765
No 152
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.69 E-value=1.9e-05 Score=86.92 Aligned_cols=40 Identities=40% Similarity=0.636 Sum_probs=36.5
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.+||+|||||++|++||.+|++.|++|+|+|++ .+||.+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~ 41 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCV 41 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCcccc
Confidence 478999999999999999999999999999998 5888754
No 153
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.67 E-value=1.9e-05 Score=86.02 Aligned_cols=39 Identities=33% Similarity=0.556 Sum_probs=36.1
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
+||+|||||++|++||..|++.|++|+|+|++ .+||.+.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~ 42 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCL 42 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCccc
Confidence 68999999999999999999999999999998 7888653
No 154
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.67 E-value=1.7e-05 Score=86.06 Aligned_cols=39 Identities=33% Similarity=0.481 Sum_probs=34.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCC-CcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFG-IEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g-~~v~v~e~~~~~GG 176 (661)
...||+|||||++|+++|+.|+++| ++|+|+|++..+|+
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~ 61 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGS 61 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCC
Confidence 3579999999999999999999999 99999999656653
No 155
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.65 E-value=3.4e-05 Score=86.33 Aligned_cols=38 Identities=26% Similarity=0.475 Sum_probs=35.5
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..||+|||||++|+++|+.|+++|++|+|+|+.+..+|
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 47999999999999999999999999999999987666
No 156
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.64 E-value=2.8e-05 Score=92.37 Aligned_cols=41 Identities=41% Similarity=0.729 Sum_probs=39.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.+||+|||||+|||+||.+|++.|++|+|+|+++.+||++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 57899999999999999999999999999999999999987
No 157
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.63 E-value=3.1e-05 Score=84.25 Aligned_cols=42 Identities=21% Similarity=0.340 Sum_probs=38.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCC--CcEEEEcCCCCCCCcee
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFG--IEVVVLEARERVGGRIV 179 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g--~~v~v~e~~~~~GG~i~ 179 (661)
..++|+|||||++|++||..|++.| ++|+|+|+.+.+||+++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 3579999999999999999999999 99999999999998764
No 158
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.63 E-value=1.9e-05 Score=86.87 Aligned_cols=41 Identities=34% Similarity=0.562 Sum_probs=37.0
Q ss_pred CCcEEEEccChHHHHHHHHHHH-CCCcEEEEc--------CCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQ-FGIEVVVLE--------ARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~-~g~~v~v~e--------~~~~~GG~i~ 179 (661)
.+||+|||||++|++||++|++ .|++|+|+| +++.+||.+.
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~ 56 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCV 56 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHH
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeee
Confidence 4799999999999999999999 999999999 4678898653
No 159
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.62 E-value=2.4e-05 Score=85.30 Aligned_cols=40 Identities=43% Similarity=0.644 Sum_probs=36.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
.++|+|||||+||++||..|++.|++|+|+|+.+ +||.+.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~ 45 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCL 45 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCC
Confidence 4789999999999999999999999999999987 888653
No 160
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.62 E-value=2.4e-05 Score=85.05 Aligned_cols=41 Identities=22% Similarity=0.233 Sum_probs=38.1
Q ss_pred CCcEEEEccChHHHHHHHHHHH-C------CCcEEEEcCCCCCCCcee
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQ-F------GIEVVVLEARERVGGRIV 179 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~-~------g~~v~v~e~~~~~GG~i~ 179 (661)
.++|+|||||+|||+||.+|++ . |++|+|+|+.+.+||.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 4689999999999999999999 7 999999999999999864
No 161
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.60 E-value=3.6e-05 Score=83.60 Aligned_cols=36 Identities=28% Similarity=0.510 Sum_probs=34.6
Q ss_pred CcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQF--GIEVVVLEARERVG 175 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~~~G 175 (661)
++|+|||||+|||+||.+|++. |++|+|+|+++.+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 6899999999999999999998 99999999999988
No 162
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.60 E-value=5.5e-05 Score=78.90 Aligned_cols=40 Identities=30% Similarity=0.445 Sum_probs=36.4
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
++|+|||||+||+.||..|++.|++|+|+|++...+.-.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h 41 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAH 41 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccc
Confidence 6899999999999999999999999999999987776543
No 163
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.59 E-value=4e-05 Score=86.55 Aligned_cols=41 Identities=24% Similarity=0.341 Sum_probs=37.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCce
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRI 178 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i 178 (661)
..+||+|||||++|++||+.|++.|++|+|+|+.+..||..
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 35799999999999999999999999999999999999844
No 164
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.59 E-value=4e-05 Score=86.18 Aligned_cols=40 Identities=23% Similarity=0.381 Sum_probs=36.1
Q ss_pred CCCCCcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCCCCC
Q psy6038 136 VKKSGKVIVIGAGISGLAAARHMEQF--GIEVVVLEARERVG 175 (661)
Q Consensus 136 ~~~~~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~~~G 175 (661)
....++|+|||||+|||+||.+|++. |++|+|+|+++.+|
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~ 74 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS 74 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred cccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 34568999999999999999999998 89999999999876
No 165
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.59 E-value=3.2e-05 Score=86.48 Aligned_cols=38 Identities=29% Similarity=0.459 Sum_probs=34.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC-CCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE-RVG 175 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~-~~G 175 (661)
..+||+|||||+||++||..|++.|.+|+|+|++. .+|
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG 65 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG 65 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc
Confidence 46899999999999999999999999999999985 444
No 166
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.58 E-value=3.6e-05 Score=86.38 Aligned_cols=39 Identities=28% Similarity=0.318 Sum_probs=36.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
..||+|||||+|||+||..|++.|.+|+|+|+....||.
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~ 45 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSH 45 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCc
Confidence 469999999999999999999999999999999887663
No 167
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.58 E-value=4e-05 Score=85.12 Aligned_cols=39 Identities=31% Similarity=0.501 Sum_probs=34.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
...||+|||||+|||+||..|++ |.+|+|+|+.+..||.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 35799999999999999999999 9999999999987764
No 168
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.57 E-value=4.8e-05 Score=83.04 Aligned_cols=36 Identities=33% Similarity=0.626 Sum_probs=33.2
Q ss_pred cEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 141 KVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 141 ~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
||+|||||++||+||..|++.|++|+|+|+. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCch
Confidence 6999999999999999999999999999999 66663
No 169
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.57 E-value=2.7e-05 Score=85.57 Aligned_cols=41 Identities=32% Similarity=0.597 Sum_probs=38.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceec
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVT 180 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t 180 (661)
.++|+|||||++||+||++|++. ++|+|+|+++++||.+..
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~ 148 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL 148 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec
Confidence 46899999999999999999999 999999999999998653
No 170
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.57 E-value=5.1e-05 Score=71.04 Aligned_cols=33 Identities=42% Similarity=0.664 Sum_probs=31.7
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
++|+|||||++|+.+|..|++.|.+|+|+|+.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 589999999999999999999999999999987
No 171
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.56 E-value=3.6e-05 Score=83.75 Aligned_cols=38 Identities=24% Similarity=0.296 Sum_probs=35.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCC-----CcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFG-----IEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g-----~~v~v~e~~~~~GG 176 (661)
.++|+|||||++||+||..|++.| ++|+|+|+++.+|.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~ 72 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRW 72 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCC
Confidence 468999999999999999999999 99999999999884
No 172
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.56 E-value=5e-05 Score=84.02 Aligned_cols=41 Identities=29% Similarity=0.546 Sum_probs=36.8
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCcee
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIV 179 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~ 179 (661)
...++|+|||||+|||+||.+|+++|++|+|+|+ ++||.+.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 3467999999999999999999999999999986 6888764
No 173
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.55 E-value=4.4e-05 Score=86.54 Aligned_cols=39 Identities=31% Similarity=0.415 Sum_probs=35.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
..||+|||||+|||+||+.|++.|.+|+|+|+....+|.
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~ 43 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSH 43 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCc
Confidence 469999999999999999999999999999999877553
No 174
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.54 E-value=4.5e-05 Score=85.88 Aligned_cols=40 Identities=23% Similarity=0.281 Sum_probs=36.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
...||+|||||+|||+||..|++.|++|+|+|+....||.
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~ 56 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSH 56 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCC
Confidence 3579999999999999999999999999999998876663
No 175
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.53 E-value=4.7e-05 Score=82.07 Aligned_cols=39 Identities=26% Similarity=0.526 Sum_probs=36.1
Q ss_pred CCcEEEEccChHHHHHHHHHHH--CCCcEEEEcCCCCCCCc
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQ--FGIEVVVLEARERVGGR 177 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~--~g~~v~v~e~~~~~GG~ 177 (661)
.++|+|||||++||+||++|++ .|++|+|+|+++..++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 3689999999999999999999 89999999999998765
No 176
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.52 E-value=6.1e-05 Score=83.71 Aligned_cols=35 Identities=17% Similarity=0.386 Sum_probs=32.5
Q ss_pred CCcEEEEccChHHHHHHHHHHH---CCCcEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQ---FGIEVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~---~g~~v~v~e~~~~ 173 (661)
.++|+|||||++|+++|+.|++ .|++|+|+|+...
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 5799999999999999999999 9999999999653
No 177
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.52 E-value=5.9e-05 Score=81.77 Aligned_cols=39 Identities=36% Similarity=0.568 Sum_probs=34.8
Q ss_pred CCcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCCCCCCc
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQF--GIEVVVLEARERVGGR 177 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~~~GG~ 177 (661)
.++|+|||||+|||+||+.|++. |++|+|+|+.+.+++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~ 43 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHA 43 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC--
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccC
Confidence 47999999999999999999998 8899999999988764
No 178
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.52 E-value=4.3e-05 Score=83.43 Aligned_cols=37 Identities=27% Similarity=0.401 Sum_probs=31.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQF--GIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~~~G 175 (661)
.++|+|||||++||+||..|++. |++|+|+|+++.++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 46899999999999999999998 99999999999875
No 179
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.49 E-value=6e-05 Score=84.89 Aligned_cols=35 Identities=37% Similarity=0.586 Sum_probs=32.2
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
...+||+|||||+|||+||.+|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 34589999999999999999999999999999983
No 180
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.49 E-value=5.4e-05 Score=85.92 Aligned_cols=37 Identities=24% Similarity=0.421 Sum_probs=34.3
Q ss_pred CCcEEEEccChHHHHHHHHHHH-CCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQ-FGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~-~g~~v~v~e~~~~~G 175 (661)
..+|+|||||++||++|..|++ .|++|+|+|+++.++
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 4689999999999999999999 999999999997654
No 181
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.48 E-value=7.4e-05 Score=83.28 Aligned_cols=39 Identities=26% Similarity=0.450 Sum_probs=35.0
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC-CCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE-RVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~-~~GG 176 (661)
..+||+|||||+||++||..|++.|.+|+|+|++. .+|+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~ 65 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ 65 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC
Confidence 35899999999999999999999999999999984 5553
No 182
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.46 E-value=7.2e-05 Score=83.62 Aligned_cols=39 Identities=28% Similarity=0.388 Sum_probs=35.0
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC-CCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE-RVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~-~~GG 176 (661)
..+||+|||||+||++||..|++.|.+|+|+|++. .+|+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 45899999999999999999999999999999985 4554
No 183
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.46 E-value=4.9e-05 Score=81.30 Aligned_cols=38 Identities=26% Similarity=0.293 Sum_probs=35.1
Q ss_pred CcEEEEccChHHHHHHHHHHH---CCCcEEEEcCCCCCCCc
Q psy6038 140 GKVIVIGAGISGLAAARHMEQ---FGIEVVVLEARERVGGR 177 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~---~g~~v~v~e~~~~~GG~ 177 (661)
++|+|||||++||+||.+|++ .|++|+|+|+++..+++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~ 42 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFR 42 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceec
Confidence 579999999999999999999 89999999999987654
No 184
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.45 E-value=7.3e-05 Score=82.83 Aligned_cols=36 Identities=17% Similarity=0.409 Sum_probs=32.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHH------------CCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQ------------FGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~------------~g~~v~v~e~~~~ 173 (661)
..++|+|||||+||++||..|++ .|++|+|+|+.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 35799999999999999999999 9999999998653
No 185
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.45 E-value=6e-05 Score=83.45 Aligned_cols=40 Identities=28% Similarity=0.490 Sum_probs=35.5
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCC--------CCCCCce
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEAR--------ERVGGRI 178 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~--------~~~GG~i 178 (661)
.+||+|||||++|++||.++++.|.+|+|+|+. ..+||-|
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtC 89 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTC 89 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcc
Confidence 479999999999999999999999999999974 4578754
No 186
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.44 E-value=7.1e-05 Score=84.93 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=33.6
Q ss_pred CCCcEEEEccChHHHHHHHHHH---H-CCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHME---Q-FGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~---~-~g~~v~v~e~~~~~ 174 (661)
...||+|||||+|||+||..|+ + .|.+|+|+|+....
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVE 61 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCC
Confidence 4579999999999999999999 6 89999999999753
No 187
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.44 E-value=5.7e-05 Score=83.34 Aligned_cols=35 Identities=23% Similarity=0.426 Sum_probs=30.7
Q ss_pred CCcEEEEccChHHHHHHHHHHH---CCCcEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQ---FGIEVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~---~g~~v~v~e~~~~ 173 (661)
.++|+|||||++|+++|+.|++ .|++|+|+|+.+.
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 3689999999999999999999 9999999999753
No 188
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.42 E-value=9.8e-05 Score=82.28 Aligned_cols=35 Identities=26% Similarity=0.501 Sum_probs=32.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHH---CCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQ---FGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~---~g~~v~v~e~~~ 172 (661)
+.++|+|||||++|++||..|++ .|++|+|+|+.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 35799999999999999999999 999999999965
No 189
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.40 E-value=7.6e-05 Score=83.93 Aligned_cols=39 Identities=21% Similarity=0.312 Sum_probs=35.5
Q ss_pred CCcEEEEccChHHHHHHHHHHHCC--CcEEEEcCCCCCCCc
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFG--IEVVVLEARERVGGR 177 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g--~~v~v~e~~~~~GG~ 177 (661)
..||+|||||+|||+||..|++.| .+|+|+|+....+|.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~ 45 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSH 45 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCCh
Confidence 469999999999999999999999 999999998876653
No 190
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.37 E-value=0.00012 Score=77.73 Aligned_cols=40 Identities=23% Similarity=0.376 Sum_probs=36.2
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
.++.+|+|||||+||++||..|.+.|++|+|+|+.+.++.
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y 46 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY 46 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc
Confidence 4567899999999999999999888999999999998875
No 191
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.34 E-value=0.00012 Score=81.87 Aligned_cols=36 Identities=28% Similarity=0.483 Sum_probs=34.1
Q ss_pred CcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQF--GIEVVVLEARERVG 175 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~~~G 175 (661)
++|+|||||+|||+||+.|++. |++|+|+|+++.+|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 5899999999999999999998 88999999999887
No 192
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.34 E-value=0.00012 Score=79.38 Aligned_cols=37 Identities=24% Similarity=0.271 Sum_probs=33.9
Q ss_pred CcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCCCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQF--GIEVVVLEARERVGG 176 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~~~GG 176 (661)
++|+|||||++|++||..|++. |++|+|+|+++.+|.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 39 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc
Confidence 4799999999999999999998 999999999987653
No 193
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.33 E-value=0.00012 Score=79.24 Aligned_cols=37 Identities=24% Similarity=0.309 Sum_probs=34.2
Q ss_pred CcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCCCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQF--GIEVVVLEARERVGG 176 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~~~GG 176 (661)
++|+|||||+||++||..|++. |++|+|+|+.+.+|.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 39 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISF 39 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSB
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCc
Confidence 4799999999999999999998 999999999988763
No 194
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.33 E-value=0.00012 Score=78.04 Aligned_cols=37 Identities=35% Similarity=0.527 Sum_probs=32.8
Q ss_pred CCcEEEEccChHHHHHHHHHHHCC--CcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFG--IEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g--~~v~v~e~~~~~G 175 (661)
+|+|+|||||+||++||.+|++.| .+|+|+|+++...
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~ 40 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYY 40 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCC
Confidence 578999999999999999999876 4899999988643
No 195
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.32 E-value=0.00013 Score=82.61 Aligned_cols=38 Identities=13% Similarity=0.304 Sum_probs=34.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHC------CCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQF------GIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~------g~~v~v~e~~~~~GG 176 (661)
..||+|||||+|||+||..|++. |.+|+|+|+....++
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s 65 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERS 65 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCC
Confidence 57999999999999999999998 999999999876443
No 196
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.31 E-value=0.00014 Score=79.56 Aligned_cols=38 Identities=29% Similarity=0.351 Sum_probs=34.3
Q ss_pred CCcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQF--GIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~~~GG 176 (661)
.++|+|||||++|++||..|++. |++|+|+|+.+..|+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 75 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSY 75 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSB
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCC
Confidence 46999999999999999999996 899999999988764
No 197
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.31 E-value=0.00015 Score=82.46 Aligned_cols=36 Identities=31% Similarity=0.539 Sum_probs=33.3
Q ss_pred CCcEEEEccChHHHHHHHHHHH-----CCCcEEEEcCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQ-----FGIEVVVLEARERV 174 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~-----~g~~v~v~e~~~~~ 174 (661)
..+|+||||||+||++|..|++ .|++|+|+|+++.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 4689999999999999999999 99999999998654
No 198
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.28 E-value=0.00013 Score=80.10 Aligned_cols=39 Identities=23% Similarity=0.414 Sum_probs=34.9
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQF--GIEVVVLEARERVG 175 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~~~G 175 (661)
...++|+|||||+||++||..|++. |.+|+|+|+.+.++
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 4467899999999999999999887 88999999998765
No 199
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.27 E-value=0.00018 Score=76.95 Aligned_cols=38 Identities=21% Similarity=0.371 Sum_probs=34.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI--EVVVLEARERVG 175 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~~~G 175 (661)
..++|+|||||++|++||..|++.|+ +|+|+|+.+.++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP 45 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc
Confidence 45789999999999999999999998 499999998765
No 200
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.26 E-value=0.00018 Score=75.81 Aligned_cols=37 Identities=27% Similarity=0.441 Sum_probs=32.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
...+|+|||||+||++||..|++.| +|+|+|+.+..+
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~ 43 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY 43 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc
Confidence 4579999999999999999999999 999999988754
No 201
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.26 E-value=0.00017 Score=79.17 Aligned_cols=39 Identities=26% Similarity=0.343 Sum_probs=35.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCC---CcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFG---IEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g---~~v~v~e~~~~~GG 176 (661)
+.++|+|||||++|++||..|++.| ++|+|+|+++.+|.
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~ 75 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISF 75 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSB
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCc
Confidence 3589999999999999999999988 99999999987664
No 202
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.25 E-value=0.00022 Score=75.45 Aligned_cols=48 Identities=19% Similarity=0.329 Sum_probs=37.9
Q ss_pred HHHHHHh-ccCceeeCceEEEEEecCCceEEEEeCCCCCCCCeEEEeCEEEEccC
Q psy6038 411 CVPTALA-EGLDVHFNSSVTEIHYNSKGVTVKTVDPKTGQNETVYTGDRVLCTLP 464 (661)
Q Consensus 411 ~L~~aLa-~~L~I~lnt~V~~I~~~~~gv~V~~~~~~~~~~g~~i~AD~VV~TvP 464 (661)
.+.+.|. .+++|+++++|++|+.+++++.|++.+ |+++.||.||+|+.
T Consensus 192 ~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~------g~~i~~d~vv~a~G 240 (384)
T 2v3a_A 192 AVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSD------GEVIPCDLVVSAVG 240 (384)
T ss_dssp HHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETT------SCEEEESEEEECSC
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECC------CCEEECCEEEECcC
Confidence 3444443 367999999999999877777777754 78899999999976
No 203
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.23 E-value=0.00017 Score=77.87 Aligned_cols=37 Identities=19% Similarity=0.431 Sum_probs=32.7
Q ss_pred CcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCCCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGI--EVVVLEARERVGG 176 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~~~GG 176 (661)
+||+|||||+||++||.+|++.|. +|+|+|+.+..++
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~ 39 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSF 39 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSB
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC
Confidence 479999999999999999999884 7999999887653
No 204
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.21 E-value=0.00023 Score=79.23 Aligned_cols=38 Identities=29% Similarity=0.450 Sum_probs=34.3
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
...+||||||||++|+++|.+|++.|++|+|+|+....
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 35689999999999999999999999999999998754
No 205
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.20 E-value=0.00018 Score=79.12 Aligned_cols=39 Identities=15% Similarity=0.388 Sum_probs=35.0
Q ss_pred CCCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 135 PVKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 135 ~~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
....+++|||||||+||++||..|.+.+++|+|+|+++.
T Consensus 38 ~~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 38 QHSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 345567999999999999999999999999999999864
No 206
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.17 E-value=0.00023 Score=76.58 Aligned_cols=35 Identities=26% Similarity=0.594 Sum_probs=31.9
Q ss_pred CCcEEEEccChHHHHHHHHHHHCC--CcEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFG--IEVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g--~~v~v~e~~~~ 173 (661)
.++|+|||||+||++||.+|++.+ ++|+|+|+++.
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 468999999999999999999876 79999999986
No 207
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.12 E-value=0.00026 Score=76.36 Aligned_cols=36 Identities=36% Similarity=0.635 Sum_probs=33.6
Q ss_pred CCcEEEEccChHHHHHHHHHHH---CCCcEEEEcCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQ---FGIEVVVLEARERV 174 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~---~g~~v~v~e~~~~~ 174 (661)
.++|+|||||++||+||..|++ .|++|+|+|+++..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 4689999999999999999999 89999999999865
No 208
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.91 E-value=0.00047 Score=76.19 Aligned_cols=37 Identities=22% Similarity=0.422 Sum_probs=32.3
Q ss_pred CCCCcEEEEccChHHHHHHHHHHH-CCCcEEEEcCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQ-FGIEVVVLEARER 173 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~-~g~~v~v~e~~~~ 173 (661)
...+|+||||||.||+..|.+|++ .|++|+|||+...
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 346899999999999999999997 6899999999654
No 209
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.85 E-value=0.00043 Score=76.70 Aligned_cols=38 Identities=26% Similarity=0.362 Sum_probs=34.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..+|+||||||.||+++|.+|++ |.+|+|||+....++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~~ 62 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPTA 62 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcCC
Confidence 45899999999999999999999 999999999876543
No 210
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.74 E-value=0.00088 Score=73.64 Aligned_cols=37 Identities=22% Similarity=0.353 Sum_probs=34.5
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
.+||+|||+|++|+++|.+|++.|++|+|+|+..+.+
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4799999999999999999999999999999988665
No 211
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.64 E-value=0.001 Score=74.05 Aligned_cols=36 Identities=19% Similarity=0.365 Sum_probs=33.0
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCC-CcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFG-IEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g-~~v~v~e~~~~ 173 (661)
..+|+||||||.||+++|.+|++.| .+|+|+|+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4589999999999999999999998 79999999765
No 212
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.58 E-value=0.0016 Score=71.61 Aligned_cols=38 Identities=29% Similarity=0.391 Sum_probs=34.6
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
...+|++|||||++|+++|.+|++.|++|+|+|+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 45689999999999999999999999999999998654
No 213
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.34 E-value=0.0019 Score=71.99 Aligned_cols=35 Identities=29% Similarity=0.572 Sum_probs=32.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHC-CCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQF-GIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~-g~~v~v~e~~~ 172 (661)
..+|+||||||.||+++|.+|++. |++|+|||+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 468999999999999999999974 89999999987
No 214
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.33 E-value=0.00085 Score=73.69 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=31.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
.-.|||||||||+||++|..|.+.|...+++|+.+..|+.
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~ 77 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQP 77 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCC
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCc
Confidence 3469999999999999999999998888888888777763
No 215
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.25 E-value=0.0019 Score=71.85 Aligned_cols=37 Identities=30% Similarity=0.363 Sum_probs=33.7
Q ss_pred CCcEEEEccChHHHHHHHHHHH-CCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQ-FGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~-~g~~v~v~e~~~~~G 175 (661)
.+|+||||||.||+++|.+|++ .|++|+|+|+....+
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~ 39 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDE 39 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCT
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCccc
Confidence 4789999999999999999998 799999999987764
No 216
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.23 E-value=0.0025 Score=70.65 Aligned_cols=39 Identities=28% Similarity=0.419 Sum_probs=35.0
Q ss_pred CCCcEEEEccChHHHHHHHHHHHC-CCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQF-GIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~-g~~v~v~e~~~~~GG 176 (661)
..+|++|||||++|+++|++|++. |.+|+|+|+.....+
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~ 51 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRG 51 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCC
Confidence 458999999999999999999998 899999999876543
No 217
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.15 E-value=0.0029 Score=70.85 Aligned_cols=37 Identities=30% Similarity=0.441 Sum_probs=33.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHH-CCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQ-FGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~-~g~~v~v~e~~~~~ 174 (661)
..+|++|||||++|+++|.+|++ .|++|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 45799999999999999999999 89999999998654
No 218
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.84 E-value=0.011 Score=52.59 Aligned_cols=39 Identities=21% Similarity=0.330 Sum_probs=34.7
Q ss_pred CCCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 135 PVKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 135 ~~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
+...+.+|+|||+|..|...|..|.+.|++|+++|++..
T Consensus 3 ~~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 3 AVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred cccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 345567899999999999999999999999999999753
No 219
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.78 E-value=0.0075 Score=61.38 Aligned_cols=36 Identities=22% Similarity=0.502 Sum_probs=33.3
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
.++|+|||||..|+-+|..|++.|.+|+|+|+++++
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 478999999999999999999999999999987764
No 220
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.67 E-value=0.011 Score=53.57 Aligned_cols=37 Identities=30% Similarity=0.401 Sum_probs=33.3
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
....+|+|||+|..|+..|..|.+.|++|++++++..
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4567899999999999999999999999999998753
No 221
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.66 E-value=0.011 Score=63.84 Aligned_cols=40 Identities=33% Similarity=0.522 Sum_probs=36.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
..++|+|||+|++|+.+|..|++.|.+|+|+|+.+++..+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 187 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV 187 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc
Confidence 3579999999999999999999999999999999887653
No 222
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.58 E-value=0.0098 Score=62.76 Aligned_cols=39 Identities=28% Similarity=0.343 Sum_probs=36.5
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
.++|+|||+|..|+-+|..|++.|.+|+|+|+.+++..+
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 184 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER 184 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 468999999999999999999999999999999998765
No 223
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.30 E-value=0.036 Score=59.75 Aligned_cols=35 Identities=37% Similarity=0.522 Sum_probs=32.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
+.++|.|||.|.+|+++|+.|.++|++|++.|++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 46899999999999999999999999999999865
No 224
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.22 E-value=0.015 Score=62.83 Aligned_cols=39 Identities=33% Similarity=0.532 Sum_probs=35.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..++|+|||||++|+-+|..|++.|.+|+|+|+.+++..
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 208 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP 208 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 357899999999999999999999999999999998764
No 225
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.12 E-value=0.021 Score=60.07 Aligned_cols=39 Identities=26% Similarity=0.388 Sum_probs=36.3
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
.++|+|||+|+.|+.+|..|.+.|.+|+|+|+.+++..+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~ 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc
Confidence 578999999999999999999999999999999887664
No 226
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.09 E-value=0.02 Score=50.25 Aligned_cols=34 Identities=21% Similarity=0.457 Sum_probs=30.9
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|+|||+|..|...|..|.+.|++|++++++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 227
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.07 E-value=0.02 Score=61.90 Aligned_cols=38 Identities=26% Similarity=0.467 Sum_probs=35.3
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
.++|+|||||+.|+-+|..|++.|.+|+|+|+.+++..
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP 206 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 47899999999999999999999999999999988754
No 228
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.01 E-value=0.022 Score=61.44 Aligned_cols=37 Identities=35% Similarity=0.606 Sum_probs=34.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
.++|+|||+|++|+.+|..|++.|.+|+|+|+.+++.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l 203 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL 203 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc
Confidence 4789999999999999999999999999999988764
No 229
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.00 E-value=0.018 Score=61.98 Aligned_cols=39 Identities=26% Similarity=0.512 Sum_probs=34.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..++|.|||.|.+|+++|+.|.++|++|+++|.+...-|
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~ 42 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG 42 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch
Confidence 356899999999999999999999999999999876543
No 230
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.97 E-value=0.022 Score=59.67 Aligned_cols=37 Identities=30% Similarity=0.524 Sum_probs=34.4
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
++|+|||+|+.|+-+|..|++.|.+|+++|+.+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 6899999999999999999999999999999987653
No 231
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.93 E-value=0.02 Score=57.96 Aligned_cols=35 Identities=26% Similarity=0.650 Sum_probs=32.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..++|+|||+|..|+-+|..|++.|.+|+|+|+..
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 46789999999999999999999999999999754
No 232
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.90 E-value=0.023 Score=61.23 Aligned_cols=37 Identities=27% Similarity=0.520 Sum_probs=34.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
.++|+|||+|+.|+-+|..|++.|.+|+|+|+.+++.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 206 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc
Confidence 5799999999999999999999999999999988764
No 233
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=94.86 E-value=0.025 Score=61.42 Aligned_cols=38 Identities=29% Similarity=0.584 Sum_probs=35.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
.++|+|||||..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 220 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA 220 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc
Confidence 57999999999999999999999999999999998765
No 234
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.86 E-value=0.028 Score=49.80 Aligned_cols=34 Identities=24% Similarity=0.430 Sum_probs=31.6
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 235
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.80 E-value=0.028 Score=59.66 Aligned_cols=38 Identities=24% Similarity=0.545 Sum_probs=34.9
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
.++|+|||+|..|+-+|..|.+.|.+|+++|+.+++..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 182 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS 182 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc
Confidence 57999999999999999999999999999999887643
No 236
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.73 E-value=0.028 Score=52.31 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=32.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHC-CCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQF-GIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~-g~~v~v~e~~~ 172 (661)
.+.+|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 456899999999999999999999 99999999875
No 237
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.56 E-value=0.034 Score=59.91 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=34.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
.++|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 203 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL 203 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh
Confidence 4789999999999999999999999999999987754
No 238
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.54 E-value=0.029 Score=47.61 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=31.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCC-CcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFG-IEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g-~~v~v~e~~~ 172 (661)
.++|+|+|+|..|...+..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999999999 9999999864
No 239
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.47 E-value=0.043 Score=49.42 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=31.5
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
+.+|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4689999999999999999999999999999863
No 240
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.30 E-value=0.042 Score=59.43 Aligned_cols=37 Identities=35% Similarity=0.576 Sum_probs=34.5
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
.++|+|||+|..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l 202 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL 202 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc
Confidence 4689999999999999999999999999999998765
No 241
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.29 E-value=0.03 Score=60.84 Aligned_cols=39 Identities=31% Similarity=0.560 Sum_probs=36.0
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..++|+|||+|++|+-+|..|++.|.+|+|+|+.+++..
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 223 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT 223 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh
Confidence 457899999999999999999999999999999988765
No 242
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.27 E-value=0.047 Score=58.43 Aligned_cols=37 Identities=30% Similarity=0.487 Sum_probs=34.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
.++|+|||+|..|+-+|..|.+.|.+|+|+|+.+++.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 185 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL 185 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 5789999999999999999999999999999987654
No 243
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.19 E-value=0.042 Score=59.86 Aligned_cols=39 Identities=28% Similarity=0.446 Sum_probs=35.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..++|+|||+|..|+-+|..|++.|.+|+|+|+.+++-.
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 231 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA 231 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh
Confidence 457899999999999999999999999999999887644
No 244
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=94.16 E-value=0.046 Score=59.60 Aligned_cols=40 Identities=25% Similarity=0.416 Sum_probs=36.5
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
..++|+|||+|..|+-+|..|++.|.+|+|+|+.+++...
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 212 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL 212 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc
Confidence 3578999999999999999999999999999999987653
No 245
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.02 E-value=0.05 Score=58.97 Aligned_cols=38 Identities=34% Similarity=0.622 Sum_probs=35.3
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
.++|+|||+|..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 47899999999999999999999999999999988765
No 246
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.02 E-value=0.045 Score=48.17 Aligned_cols=34 Identities=26% Similarity=0.469 Sum_probs=31.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|+|+|+|..|...|..|.+.|++|++++++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999998763
No 247
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.99 E-value=0.11 Score=51.50 Aligned_cols=35 Identities=20% Similarity=0.412 Sum_probs=32.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.+++|+|||+|-.|+..|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 56899999999999999999999999999997653
No 248
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=93.97 E-value=0.054 Score=57.48 Aligned_cols=38 Identities=24% Similarity=0.564 Sum_probs=34.5
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
..++|+|||+|..|+-+|..|.+.|.+|+++|+.+++-
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 179 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL 179 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc
Confidence 35789999999999999999999999999999987654
No 249
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=93.92 E-value=0.055 Score=58.14 Aligned_cols=40 Identities=33% Similarity=0.478 Sum_probs=36.5
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
..++|+|||+|..|+-+|..|++.|.+|+++|+.+++..+
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 4578999999999999999999999999999999887654
No 250
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=93.88 E-value=0.043 Score=59.60 Aligned_cols=38 Identities=29% Similarity=0.505 Sum_probs=35.3
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
.++|+|||||..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~ 222 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ 222 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 57899999999999999999999999999999988754
No 251
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=93.85 E-value=0.055 Score=58.41 Aligned_cols=38 Identities=24% Similarity=0.470 Sum_probs=35.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
.++|+|||+|..|+-.|..|.+.|.+|+|+|+.+++..
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 208 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP 208 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 57899999999999999999999999999999987754
No 252
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.82 E-value=0.057 Score=56.70 Aligned_cols=36 Identities=31% Similarity=0.554 Sum_probs=33.0
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
...+|+|||+|..|+.+|..|...|.+|++++++..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 457999999999999999999999999999998753
No 253
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.80 E-value=0.05 Score=56.43 Aligned_cols=38 Identities=24% Similarity=0.470 Sum_probs=31.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
..++|+|||+|.+|+-+|..|.+.|.+|+++++.+++.
T Consensus 165 ~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~ 202 (369)
T 3d1c_A 165 NKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLN 202 (369)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----
T ss_pred CCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCC
Confidence 35689999999999999999999999999999876543
No 254
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=93.70 E-value=0.06 Score=54.38 Aligned_cols=37 Identities=22% Similarity=0.355 Sum_probs=33.5
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..++|+|||+|.+|+-+|..|.+.|.+|+++++++++
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 178 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGF 178 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCcc
Confidence 3589999999999999999999999999999987654
No 255
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=93.56 E-value=0.069 Score=57.94 Aligned_cols=38 Identities=32% Similarity=0.429 Sum_probs=34.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
..++|+|||+|..|+-.|..|++.|.+|+++|+.+++.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 221 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL 221 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc
Confidence 35789999999999999999999999999999998765
No 256
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=93.46 E-value=0.057 Score=57.87 Aligned_cols=38 Identities=21% Similarity=0.461 Sum_probs=35.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
.++|+|||||..|+-.|..|++.|.+|+|+|+.+++..
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~ 184 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK 184 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc
Confidence 46899999999999999999999999999999988764
No 257
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.43 E-value=0.058 Score=54.94 Aligned_cols=35 Identities=23% Similarity=0.448 Sum_probs=31.0
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
...+|+|||||.-|-.-|..++..|++|+++|..+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 35689999999999999999999999999999764
No 258
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.38 E-value=0.066 Score=58.46 Aligned_cols=38 Identities=18% Similarity=0.393 Sum_probs=35.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
.++|+|||+|..|+-.|..|++.|.+|+|+|+.+++..
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR 213 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc
Confidence 57999999999999999999999999999999887653
No 259
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=93.37 E-value=0.065 Score=54.08 Aligned_cols=37 Identities=35% Similarity=0.434 Sum_probs=33.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..++|+|||+|.+|+-+|..|++.|.+|+++++.+++
T Consensus 143 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 143 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 3578999999999999999999999999999988754
No 260
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.36 E-value=0.05 Score=58.82 Aligned_cols=39 Identities=33% Similarity=0.439 Sum_probs=35.5
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..++|+|||+|..|+-+|..|.+.|.+|+|+|+.+++..
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 214 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP 214 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 357899999999999999999999999999999987654
No 261
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.35 E-value=0.061 Score=56.00 Aligned_cols=35 Identities=26% Similarity=0.536 Sum_probs=32.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
...+|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46799999999999999999999999999999875
No 262
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=93.25 E-value=0.086 Score=55.75 Aligned_cols=37 Identities=43% Similarity=0.531 Sum_probs=34.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
.++|+|||+|..|+-+|..|.+.|.+|+++|+.+++.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~ 178 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM 178 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence 5789999999999999999999999999999987653
No 263
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.24 E-value=0.085 Score=55.96 Aligned_cols=37 Identities=43% Similarity=0.662 Sum_probs=34.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
.++|+|||+|..|+-+|..|.+.|.+|+++|+.+++-
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l 188 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL 188 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh
Confidence 5789999999999999999999999999999988763
No 264
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.14 E-value=0.084 Score=50.81 Aligned_cols=35 Identities=23% Similarity=0.334 Sum_probs=32.3
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
-.+++|+|||||..|...|..|.+.|.+|+|+...
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 45789999999999999999999999999999765
No 265
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=93.13 E-value=0.081 Score=57.16 Aligned_cols=38 Identities=24% Similarity=0.357 Sum_probs=34.9
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
.++|+|||+|..|+-+|..|.+.|.+|+++|+.+++-.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR 213 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC
Confidence 57899999999999999999999999999999887653
No 266
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=93.12 E-value=0.086 Score=56.94 Aligned_cols=39 Identities=31% Similarity=0.486 Sum_probs=35.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..++|+|||+|..|+-+|..|.+.|.+|+|+|+.+++..
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP 211 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc
Confidence 357899999999999999999999999999999987653
No 267
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=93.09 E-value=0.076 Score=54.16 Aligned_cols=37 Identities=24% Similarity=0.528 Sum_probs=33.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..++|+|||+|.+|+-+|..|.+.|.+|+++++.+.+
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 4678999999999999999999999999999998764
No 268
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.02 E-value=0.081 Score=57.17 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=35.5
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..++|+|||+|.+|+-.|..|++.|.+|+++++++.+-+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~ 234 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMG 234 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCC
Confidence 468999999999999999999999999999999877544
No 269
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=92.94 E-value=0.085 Score=54.01 Aligned_cols=37 Identities=24% Similarity=0.488 Sum_probs=33.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..++|+|||+|.+|+-.|..|++.|.+|+++++++++
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~ 190 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEF 190 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcC
Confidence 4589999999999999999999999999999987654
No 270
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=92.91 E-value=0.095 Score=57.00 Aligned_cols=39 Identities=28% Similarity=0.506 Sum_probs=35.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..++|+|||+|..|+-.|..|++.|.+|+|+|+.+++..
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 235 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG 235 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc
Confidence 357899999999999999999999999999999988754
No 271
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=92.87 E-value=0.084 Score=56.76 Aligned_cols=37 Identities=24% Similarity=0.391 Sum_probs=33.9
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
.++|+|||+|..|+-.|..|++.|.+|+++|+.+++-
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 185 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL 185 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh
Confidence 5789999999999999999999999999999987653
No 272
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=92.86 E-value=0.087 Score=53.33 Aligned_cols=37 Identities=27% Similarity=0.432 Sum_probs=33.5
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..++|+|||+|.+|+-.|..|.+.|.+|+++++.+.+
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF 180 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc
Confidence 4578999999999999999999999999999987654
No 273
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=92.85 E-value=0.093 Score=58.13 Aligned_cols=38 Identities=26% Similarity=0.491 Sum_probs=35.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
.++|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 188 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT 188 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch
Confidence 46899999999999999999999999999999987654
No 274
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=92.84 E-value=0.091 Score=53.47 Aligned_cols=37 Identities=32% Similarity=0.555 Sum_probs=33.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..++|+|||+|.+|+-+|..|.+.|.+|+++++.+.+
T Consensus 151 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 187 (325)
T 2q7v_A 151 KGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTL 187 (325)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcC
Confidence 3578999999999999999999999999999987654
No 275
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=92.83 E-value=0.12 Score=55.82 Aligned_cols=40 Identities=25% Similarity=0.409 Sum_probs=36.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
..++|+|||+|..|+-+|..|++.|.+|+++++.+++...
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 210 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT 210 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC
Confidence 3578999999999999999999999999999999877653
No 276
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=92.82 E-value=0.075 Score=58.63 Aligned_cols=37 Identities=19% Similarity=0.197 Sum_probs=34.2
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
...++|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 176 ~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 176 LAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 4568999999999999999999999999999999875
No 277
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=92.73 E-value=0.1 Score=56.58 Aligned_cols=37 Identities=19% Similarity=0.434 Sum_probs=34.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
.++|+|||+|..|+-+|..|++.|.+|+++++.+++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 4789999999999999999999999999999987754
No 278
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.62 E-value=0.1 Score=55.06 Aligned_cols=36 Identities=39% Similarity=0.614 Sum_probs=32.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
...+|+|||+|.+|+.+|..|...|.+|++++++..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 467899999999999999999999999999998753
No 279
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=92.60 E-value=0.096 Score=53.47 Aligned_cols=37 Identities=16% Similarity=0.346 Sum_probs=33.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..++|+|||+|.+|+-.|..|.+.|.+|+++++.+++
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~ 187 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF 187 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCcc
Confidence 4679999999999999999999999999999998754
No 280
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.59 E-value=0.1 Score=53.58 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=31.6
Q ss_pred CCcEEEEccChHHHH-HHHHHHHCCCcEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLA-AARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~-aa~~l~~~g~~v~v~e~~~~ 173 (661)
.++|.|||.|.+|++ +|..|.++|++|++.|++..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 468999999999997 78999999999999998764
No 281
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=92.53 E-value=0.12 Score=55.55 Aligned_cols=39 Identities=33% Similarity=0.374 Sum_probs=35.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..++|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 184 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP 184 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc
Confidence 357899999999999999999999999999999887643
No 282
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=92.48 E-value=0.12 Score=55.55 Aligned_cols=38 Identities=26% Similarity=0.400 Sum_probs=33.6
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARERV 174 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~~~ 174 (661)
...++|+|||+|.+|+-+|..|.+.|. +|++++++++.
T Consensus 262 ~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 262 AAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 457899999999999999999999998 59999887654
No 283
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=92.47 E-value=0.081 Score=58.43 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=34.2
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
...++|+|||+|.+|+-.|..|++.|.+|+|+++.+.
T Consensus 183 ~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 183 FTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred cCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 3568999999999999999999999999999999876
No 284
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.46 E-value=0.11 Score=53.03 Aligned_cols=37 Identities=24% Similarity=0.495 Sum_probs=33.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..++|+|||+|.+|+-+|..|.+.|.+|+++++.+++
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 4678999999999999999999999999999987764
No 285
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.43 E-value=0.13 Score=54.14 Aligned_cols=36 Identities=28% Similarity=0.564 Sum_probs=32.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
...+|+|||+|.+|+.+|..|...|.+|++++++..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 568999999999999999999999999999998753
No 286
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.42 E-value=0.11 Score=52.01 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=32.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
.++|+|||+|.-|...|..|+++|++|++++++..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 36899999999999999999999999999998753
No 287
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.41 E-value=0.095 Score=50.21 Aligned_cols=34 Identities=29% Similarity=0.344 Sum_probs=31.0
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
++|+|||+|..|...|..|.+.|++|+++|++..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3699999999999999999999999999998643
No 288
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=92.32 E-value=0.11 Score=55.70 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=34.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCc-EEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIE-VVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~-v~v~e~~~~~ 174 (661)
..++|+|||+|.+|+-.|..|++.|.+ |+++++++.+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 468999999999999999999999999 9999998765
No 289
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.27 E-value=0.084 Score=58.34 Aligned_cols=36 Identities=22% Similarity=0.359 Sum_probs=33.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
..++|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 568999999999999999999999999999999875
No 290
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=92.12 E-value=0.11 Score=52.74 Aligned_cols=36 Identities=31% Similarity=0.457 Sum_probs=32.8
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
.++|+|||+|.+|+-.|..|.+.|.+|+++++.+++
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~ 190 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKY 190 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCcc
Confidence 578999999999999999999999999999987643
No 291
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.06 E-value=0.13 Score=51.98 Aligned_cols=34 Identities=32% Similarity=0.475 Sum_probs=31.3
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|.|||+|.-|...|..|++.|++|++++++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3679999999999999999999999999999863
No 292
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.02 E-value=0.16 Score=52.14 Aligned_cols=35 Identities=23% Similarity=0.347 Sum_probs=31.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
+..+|+|||||..|.+.|..|++.|+ +|++++...
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 34689999999999999999999998 999999874
No 293
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=91.99 E-value=0.15 Score=55.23 Aligned_cols=38 Identities=42% Similarity=0.579 Sum_probs=34.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
..++|+|||+|..|+-.|..|.+.|.+|+++|+.+++.
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 216 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL 216 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC
Confidence 35789999999999999999999999999999988764
No 294
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.93 E-value=0.14 Score=52.20 Aligned_cols=33 Identities=24% Similarity=0.326 Sum_probs=31.2
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
++|+|||+|.-|.+.|..|++.|++|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999875
No 295
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.92 E-value=0.16 Score=48.30 Aligned_cols=36 Identities=22% Similarity=0.392 Sum_probs=31.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
..++|.|||+|.-|.+.|..|++.|++|++++++..
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 356899999999999999999999999999998765
No 296
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=91.92 E-value=0.16 Score=56.58 Aligned_cols=39 Identities=28% Similarity=0.464 Sum_probs=36.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
.++|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 225 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP 225 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc
Confidence 578999999999999999999999999999999887654
No 297
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.83 E-value=0.16 Score=51.57 Aligned_cols=38 Identities=24% Similarity=0.241 Sum_probs=33.9
Q ss_pred CCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 136 VKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 136 ~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
....++|.|||.|.-|...|..|++.|++|++++++..
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 34457899999999999999999999999999998764
No 298
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=91.83 E-value=0.13 Score=55.98 Aligned_cols=38 Identities=16% Similarity=0.275 Sum_probs=34.9
Q ss_pred CCcEEEEccChHHHHHHHHHHHC---CCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQF---GIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~---g~~v~v~e~~~~~GG 176 (661)
.++|+|||+|..|+-.|..|++. |.+|+|+|+.+++-.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~ 231 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR 231 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc
Confidence 47899999999999999999999 999999999987653
No 299
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=91.81 E-value=0.097 Score=56.33 Aligned_cols=37 Identities=19% Similarity=0.273 Sum_probs=33.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQF--GIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~~~ 174 (661)
..++|+|||+|.+|+-+|..|.+. |.+|+++++++.+
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 467999999999999999999999 8999999998764
No 300
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=91.71 E-value=0.13 Score=53.09 Aligned_cols=37 Identities=19% Similarity=0.298 Sum_probs=33.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..++|+|||+|.+|+-.|..|.+.|.+|+++++.+.+
T Consensus 162 ~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 198 (360)
T 3ab1_A 162 KGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEF 198 (360)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCC
Confidence 4578999999999999999999999999999998754
No 301
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.69 E-value=0.15 Score=51.94 Aligned_cols=34 Identities=24% Similarity=0.465 Sum_probs=31.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|.|||+|.-|.+-|..|+++|++|+++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 302
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=91.68 E-value=0.14 Score=55.69 Aligned_cols=38 Identities=13% Similarity=0.230 Sum_probs=35.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHC---CCcEEEEcCCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQF---GIEVVVLEARERVGG 176 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~---g~~v~v~e~~~~~GG 176 (661)
.++|+|||+|..|+-+|..|.+. |.+|+|+|+.+++..
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~ 227 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR 227 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc
Confidence 47899999999999999999999 999999999987654
No 303
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=91.67 E-value=0.16 Score=55.82 Aligned_cols=37 Identities=19% Similarity=0.260 Sum_probs=34.5
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
++|+|||+|..|+-.|..|.+.|.+|+++|+.+++..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~ 251 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL 251 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc
Confidence 7899999999999999999999999999999887653
No 304
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.61 E-value=0.073 Score=47.29 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=31.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|+|||+|..|...|..|.+.|++|+|++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 5789999999999999999999999999998763
No 305
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.51 E-value=0.17 Score=52.75 Aligned_cols=34 Identities=29% Similarity=0.619 Sum_probs=31.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|+|+|+|.+|+.++..|...|.+|++++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4799999999999999999999999999998874
No 306
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.49 E-value=0.14 Score=53.21 Aligned_cols=35 Identities=26% Similarity=0.434 Sum_probs=32.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
...+|+|+|||.||+.+|..|...|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 45799999999999999999999999 999999984
No 307
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=91.48 E-value=0.13 Score=56.49 Aligned_cols=37 Identities=35% Similarity=0.434 Sum_probs=33.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..++|+|||+|.+|+-+|..|++.|.+|+++++.+++
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l 390 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 390 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCccc
Confidence 4679999999999999999999999999999987654
No 308
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=91.45 E-value=0.21 Score=54.39 Aligned_cols=40 Identities=23% Similarity=0.459 Sum_probs=36.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCc
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGR 177 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~ 177 (661)
..++|+|||+|..|+-.|..|.+.|.+|+++|+.+++..+
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 220 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY 220 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc
Confidence 3578999999999999999999999999999999887653
No 309
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=91.36 E-value=0.16 Score=56.76 Aligned_cols=33 Identities=33% Similarity=0.517 Sum_probs=31.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
.++|+|||||..|+-+|..|++.|.+|+|+++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 458999999999999999999999999999987
No 310
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.29 E-value=0.15 Score=51.79 Aligned_cols=33 Identities=27% Similarity=0.435 Sum_probs=30.5
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
++|+|||+|.-|.+.|..|++.|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999875
No 311
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=91.28 E-value=0.19 Score=50.14 Aligned_cols=33 Identities=24% Similarity=0.213 Sum_probs=30.7
Q ss_pred cEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 141 KVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 141 ~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
+|.|||+|.-|.+.|..|.+.|++|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999988753
No 312
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=91.24 E-value=0.19 Score=50.61 Aligned_cols=38 Identities=29% Similarity=0.451 Sum_probs=34.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
..++|+|||+|..|+-+|..|.+.|.+|+++++.+++.
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~ 190 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK 190 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC
Confidence 45789999999999999999999999999999987643
No 313
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.21 E-value=0.35 Score=52.05 Aligned_cols=35 Identities=31% Similarity=0.425 Sum_probs=31.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.-++|.|||+|.-|...|..|+++|++|++++++.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34689999999999999999999999999999864
No 314
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.07 E-value=0.2 Score=48.93 Aligned_cols=38 Identities=24% Similarity=0.350 Sum_probs=32.5
Q ss_pred CCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 136 VKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 136 ~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
....++|.|||+|.-|.+.|..|++.|++|++++++..
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 34568999999999999999999999999999988753
No 315
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=91.04 E-value=0.2 Score=50.38 Aligned_cols=37 Identities=22% Similarity=0.390 Sum_probs=33.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..++|+|||+|..|+-+|..|.+.|.+|+++++.+++
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 3578999999999999999999999999999987654
No 316
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.99 E-value=0.17 Score=52.50 Aligned_cols=34 Identities=26% Similarity=0.553 Sum_probs=31.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEAR 171 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~ 171 (661)
...+|+|+|||.+|..+|..|...|. +|+|++++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 46799999999999999999999998 89999997
No 317
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.88 E-value=0.2 Score=50.56 Aligned_cols=33 Identities=24% Similarity=0.333 Sum_probs=30.8
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.+|.|||+|.-|.+.|..|.+.|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 579999999999999999999999999998864
No 318
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=90.87 E-value=0.21 Score=54.88 Aligned_cols=37 Identities=24% Similarity=0.413 Sum_probs=33.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
.++++|||||..|+=.|..+++.|.+|+|+++...+.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~ 259 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR 259 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc
Confidence 4789999999999999999999999999999765543
No 319
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=90.81 E-value=0.2 Score=54.09 Aligned_cols=39 Identities=26% Similarity=0.548 Sum_probs=34.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHC-CCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQF-GIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~-g~~v~v~e~~~~~GG 176 (661)
..++|+|||+|..|+-+|..|.+. |.+|+++|+.+++..
T Consensus 158 ~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~ 197 (472)
T 3iwa_A 158 EVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP 197 (472)
T ss_dssp SCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc
Confidence 357899999999999999999999 999999999876543
No 320
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.72 E-value=0.22 Score=50.65 Aligned_cols=34 Identities=38% Similarity=0.472 Sum_probs=31.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI--EVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~ 172 (661)
..+|+|||+|..|.+.|..|++.|+ +|+++++..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999999 999999874
No 321
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=90.71 E-value=0.26 Score=52.80 Aligned_cols=36 Identities=31% Similarity=0.409 Sum_probs=33.0
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
.-++|.|||+|.-|..-|..|+++|++|++++++..
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 346899999999999999999999999999998865
No 322
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.70 E-value=0.22 Score=50.03 Aligned_cols=34 Identities=38% Similarity=0.446 Sum_probs=30.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..++|.|||+|.-|-.-|..|+ .|++|+++++++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4689999999999999999999 999999999875
No 323
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.69 E-value=0.22 Score=51.95 Aligned_cols=35 Identities=26% Similarity=0.515 Sum_probs=32.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..++|+|+|+|..|+.+|..|...|.+|++++++.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 45899999999999999999999999999999864
No 324
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=90.62 E-value=0.28 Score=53.25 Aligned_cols=34 Identities=26% Similarity=0.481 Sum_probs=31.5
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|+|||+|..|+-.|..|++.|.+|+++++..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 4679999999999999999999999999999864
No 325
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.61 E-value=0.25 Score=49.12 Aligned_cols=34 Identities=15% Similarity=0.225 Sum_probs=31.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
..++|+|+|+|-.|.++|+.|.+.|.+|+|+.++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 3578999999999999999999999999999876
No 326
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=90.56 E-value=0.27 Score=53.86 Aligned_cols=33 Identities=30% Similarity=0.559 Sum_probs=30.8
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
.++|+|||+|..|+-.|..|++.|.+|+|+++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 457999999999999999999999999999985
No 327
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.51 E-value=0.23 Score=51.92 Aligned_cols=36 Identities=39% Similarity=0.568 Sum_probs=32.8
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
-..++|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 456899999999999999999999999999999864
No 328
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.46 E-value=0.23 Score=53.24 Aligned_cols=33 Identities=24% Similarity=0.485 Sum_probs=31.2
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
++|.|||+|.-|+..|..|+++|++|++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999874
No 329
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.44 E-value=0.28 Score=50.30 Aligned_cols=34 Identities=29% Similarity=0.401 Sum_probs=31.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
..+|+|||||..|.+.|..|+..|+ +|+++|...
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 4689999999999999999999999 999999874
No 330
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.44 E-value=0.23 Score=53.70 Aligned_cols=35 Identities=26% Similarity=0.492 Sum_probs=32.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
...+|+|||+|.-|+..|..|+++|++|++++++.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 35789999999999999999999999999999863
No 331
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=90.41 E-value=0.19 Score=52.36 Aligned_cols=40 Identities=30% Similarity=0.579 Sum_probs=35.6
Q ss_pred CCCcEEEEcc-ChHHHHHHHHHHHCCC---cEEEEcCCC-CCCCc
Q psy6038 138 KSGKVIVIGA-GISGLAAARHMEQFGI---EVVVLEARE-RVGGR 177 (661)
Q Consensus 138 ~~~~v~iiG~-G~aGl~aa~~l~~~g~---~v~v~e~~~-~~GG~ 177 (661)
...+|+|||| |.+|+.|+..+...|. +|++++.+. .-||+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 3578999999 9999999999999998 999999976 55776
No 332
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=90.34 E-value=0.28 Score=52.77 Aligned_cols=38 Identities=11% Similarity=0.282 Sum_probs=34.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
..++|+|||+|..|+-.|..|.+.|.+|+++++.+++.
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l 206 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL 206 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc
Confidence 36789999999999999999999999999999988764
No 333
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=90.24 E-value=0.23 Score=53.51 Aligned_cols=37 Identities=22% Similarity=0.352 Sum_probs=32.0
Q ss_pred CCCcEEEEccChHHHHHHHHHH--------------------HCCC-cEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHME--------------------QFGI-EVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~--------------------~~g~-~v~v~e~~~~~ 174 (661)
..++|+|||+|..|+-+|..|+ +.|. +|+|+++++.+
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 4689999999999999999999 6787 79999987654
No 334
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.22 E-value=0.25 Score=50.41 Aligned_cols=34 Identities=32% Similarity=0.493 Sum_probs=30.0
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..++|+|||+|.-|.+.|..|++.|++|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 3578999999999999999999999999999 664
No 335
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.20 E-value=0.26 Score=50.19 Aligned_cols=34 Identities=29% Similarity=0.403 Sum_probs=31.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
..+|+|||+|..|.+.|..|++.|+ +|++++...
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4689999999999999999999999 999999874
No 336
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.19 E-value=0.27 Score=50.45 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=30.6
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
.++|+|||+|.-|.+.|..|++.|++|+++.+.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 368999999999999999999999999999974
No 337
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=90.18 E-value=0.29 Score=52.99 Aligned_cols=38 Identities=16% Similarity=0.398 Sum_probs=34.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
..++|+|||+|..|+-.|..|.+.|.+|+++++.+++.
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l 227 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL 227 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc
Confidence 35799999999999999999999999999999988764
No 338
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=90.14 E-value=0.25 Score=49.95 Aligned_cols=37 Identities=24% Similarity=0.425 Sum_probs=33.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
..++|+|||+|.+|+-+|..|++.|.+|+++++.+++
T Consensus 153 ~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~ 189 (332)
T 3lzw_A 153 AGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKF 189 (332)
T ss_dssp BTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSC
T ss_pred CCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcC
Confidence 3678999999999999999999999999999988654
No 339
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.12 E-value=0.31 Score=48.25 Aligned_cols=35 Identities=31% Similarity=0.468 Sum_probs=32.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
.++|+|||+|-+|.++|+.|.+.|.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 68999999999999999999999999999987643
No 340
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.06 E-value=0.27 Score=49.15 Aligned_cols=34 Identities=29% Similarity=0.399 Sum_probs=31.6
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
++|.|||+|.-|...|..|.+.|++|++++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999998754
No 341
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.86 E-value=0.3 Score=49.35 Aligned_cols=34 Identities=24% Similarity=0.279 Sum_probs=31.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|.|||+|.-|...|..|++.|++|++++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999874
No 342
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=89.83 E-value=0.28 Score=50.06 Aligned_cols=35 Identities=26% Similarity=0.409 Sum_probs=32.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..++|.|||.|.-|...|..|.+.|++|++++++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 45789999999999999999999999999999874
No 343
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=89.82 E-value=0.28 Score=52.85 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=32.6
Q ss_pred CCcEEEEccChHHHHHHHHHHHC-CC-cEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQF-GI-EVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~-g~-~v~v~e~~~~ 173 (661)
.++|+|||+|.-|+..|..|+++ |+ +|++++++..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 36899999999999999999999 99 9999998876
No 344
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=89.72 E-value=0.23 Score=49.37 Aligned_cols=37 Identities=22% Similarity=0.185 Sum_probs=33.2
Q ss_pred CcEEEecccccCcCCcchhHHHHHHHHHHHHHHHHhhcC
Q psy6038 614 PRLFFAGEHTIRNYPATVHGAFLSGLKEGGHIVDQILGA 652 (661)
Q Consensus 614 ~rl~FAGe~t~~~~~gtv~GA~~SG~raA~~i~~~~~g~ 652 (661)
++||.+|+.+.. +..++-|+..|..||..|.+.+.+.
T Consensus 258 ~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 258 RGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp TTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 689999998863 7899999999999999999999874
No 345
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.70 E-value=0.21 Score=50.29 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=30.8
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
++|+|||+|.-|.+.|..|++.|++|+++.++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999999999998873
No 346
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=89.60 E-value=0.26 Score=49.69 Aligned_cols=36 Identities=28% Similarity=0.266 Sum_probs=32.9
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
.++|.|||.|.-|...|..|++.|++|++++++...
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~ 50 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEA 50 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 468999999999999999999999999999988653
No 347
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.46 E-value=0.33 Score=46.34 Aligned_cols=35 Identities=26% Similarity=0.273 Sum_probs=30.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..++|.|||+|..|.+.|..|.+.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999998764
No 348
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.46 E-value=0.31 Score=51.66 Aligned_cols=36 Identities=28% Similarity=0.420 Sum_probs=32.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
.+.+|+|||.|..|...|..|.+.|++|+|+|.+..
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 356799999999999999999999999999998854
No 349
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.43 E-value=0.33 Score=48.84 Aligned_cols=35 Identities=29% Similarity=0.469 Sum_probs=32.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..++|.|||+|..|..+|..|...|.+|++++++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 46899999999999999999999999999999864
No 350
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=89.42 E-value=0.33 Score=48.99 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=31.5
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
..++|+|||+|-+|.++|+.|.+.|. +|+|+.|..
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 35789999999999999999999998 999998763
No 351
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.37 E-value=0.32 Score=49.03 Aligned_cols=36 Identities=28% Similarity=0.435 Sum_probs=32.8
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
-..++|.|||+|..|..+|..|...|.+|++++++.
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 356789999999999999999999999999999864
No 352
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.32 E-value=0.33 Score=49.74 Aligned_cols=34 Identities=29% Similarity=0.418 Sum_probs=31.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
...+|.|||+|.-|.+-|..|.+.|++|+++.++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4578999999999999999999999999999886
No 353
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.31 E-value=0.34 Score=50.26 Aligned_cols=35 Identities=23% Similarity=0.251 Sum_probs=32.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
...+|.|||+|.-|.+.|..|++.|++|+++.+++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34689999999999999999999999999999864
No 354
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=89.24 E-value=0.36 Score=51.57 Aligned_cols=35 Identities=34% Similarity=0.620 Sum_probs=32.5
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
..+++|||.|.-|+..|..|+++|++|++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998765
No 355
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=89.22 E-value=0.79 Score=52.22 Aligned_cols=63 Identities=21% Similarity=0.286 Sum_probs=42.4
Q ss_pred hhHHHHHHHHHHhhHHhcCCccccC-CCCCCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 108 QLVSRLHCYLERHGYINFGIFQRIT-PIPVKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.....+..|+.+...... ..... ..+...-++|.|||+|.-|..-|..|++.|++|++++++.
T Consensus 282 ~~~~~~~aF~~kr~~~~~--~~~~~~~~~~~~~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 282 TTKGLIHVFFSQRGTAKV--PGVTDRGLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp HHHHHHHHHHHHHGGGCC--TTTSSSCCCCCCCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred hHHHHHHHhhhhhhhccc--CCCCccccccccCcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 334456777766544331 11000 0012234689999999999999999999999999999864
No 356
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=89.19 E-value=0.32 Score=52.89 Aligned_cols=36 Identities=25% Similarity=0.388 Sum_probs=31.5
Q ss_pred CCcEEEEccChHHHHHHHHHHH----CCCcEEEEcCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQ----FGIEVVVLEARERV 174 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~----~g~~v~v~e~~~~~ 174 (661)
.++|+|||+|..|+-+|..|++ .|.+|+++++.+++
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~ 219 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN 219 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc
Confidence 5789999999999999999987 57899999987654
No 357
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=89.17 E-value=0.35 Score=49.93 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=30.7
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.+|+|||+|..|...|..|++.|++|++++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999998763
No 358
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=89.16 E-value=0.42 Score=51.73 Aligned_cols=33 Identities=36% Similarity=0.619 Sum_probs=31.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
.++|+|||+|..|+-.|..|++.|.+|+++++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 468999999999999999999999999999974
No 359
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.11 E-value=0.43 Score=48.71 Aligned_cols=34 Identities=24% Similarity=0.485 Sum_probs=30.9
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
..+|+|||||..|.+.|..|+..|+ +|+++|...
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4589999999999999999999999 999999764
No 360
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.07 E-value=0.27 Score=48.94 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=31.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..++|+|+|+|-+|.++|+.|.+.|.+|+|+.|+.
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 35789999999999999999999999999998763
No 361
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.84 E-value=0.18 Score=54.36 Aligned_cols=66 Identities=17% Similarity=0.260 Sum_probs=47.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCCCceeccCCCccccccccEEEeCCCCChhhHHHHhhChh
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVGGRIVTFKKSNYVADLGAMVVTGLGGNPINILARQINME 213 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG~i~t~~~~~~~~d~G~~~i~~~~~~~~~~l~~~lgl~ 213 (661)
+.++|+|+|+|-.|...|..|...|++|+|+|+.+..=-++. -+++..++.|...++ .++++.|++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~--------~~~~~~~i~Gd~~~~--~~L~~Agi~ 67 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQ--------DKYDLRVVNGHASHP--DVLHEAGAQ 67 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHH--------HHSSCEEEESCTTCH--HHHHHHTTT
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH--------HhcCcEEEEEcCCCH--HHHHhcCCC
Confidence 457899999999999999999999999999998754211111 124666776654433 456677765
No 362
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=88.80 E-value=0.36 Score=51.34 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=32.6
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
....+|+|||.|-.||..|..|+++|++|+.+|-..
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 456789999999999999999999999999998764
No 363
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=88.78 E-value=0.38 Score=48.68 Aligned_cols=33 Identities=36% Similarity=0.440 Sum_probs=30.5
Q ss_pred CcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGI--EVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~ 172 (661)
.+|+|||||..|.+.|..|+..|+ +|+++|...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999999 999999864
No 364
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=88.74 E-value=0.36 Score=50.87 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=33.1
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
-..++|+|||.|..|..+|..|...|.+|+++|+.+
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 357899999999999999999999999999999865
No 365
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=88.65 E-value=0.39 Score=48.63 Aligned_cols=33 Identities=33% Similarity=0.422 Sum_probs=30.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..+|+|||+|.-|.+.|..|+ .|++|+++.++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 368999999999999999999 999999999875
No 366
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.65 E-value=0.41 Score=51.35 Aligned_cols=35 Identities=29% Similarity=0.353 Sum_probs=32.5
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.+++|+|+|+|..|.++|..|+..|.+|+++++++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 57899999999999999999999999999998864
No 367
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=88.62 E-value=0.39 Score=49.78 Aligned_cols=34 Identities=21% Similarity=0.471 Sum_probs=31.5
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
++|+|||||..|..+|+.+++.|++|++++.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 6899999999999999999999999999987654
No 368
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=88.49 E-value=0.33 Score=52.15 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=31.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
.+++|+|||+|..|...|..|.+.|.+|+|++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 4678999999999999999999999999999875
No 369
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.44 E-value=0.3 Score=48.88 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=31.5
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
++|.|||.|.-|...|..|.+.|++|++++++..
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998764
No 370
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=88.37 E-value=0.5 Score=48.18 Aligned_cols=35 Identities=26% Similarity=0.407 Sum_probs=31.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
+..+|+|||||..|.+.|+.|+..|+ +|++++...
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 35689999999999999999999999 999999865
No 371
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=88.24 E-value=0.35 Score=51.63 Aligned_cols=32 Identities=22% Similarity=0.417 Sum_probs=30.0
Q ss_pred cEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 141 KVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 141 ~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
+|.|||+|..|+..|..|++.|++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999998863
No 372
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.21 E-value=0.42 Score=51.71 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=31.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|.|||+|.-|..-|..|+++|++|++++++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999875
No 373
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=88.19 E-value=0.54 Score=47.55 Aligned_cols=36 Identities=25% Similarity=0.233 Sum_probs=32.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
..++|.|||.|.-|..-|..|.+.|++|++++++..
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 356899999999999999999999999999988753
No 374
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=88.19 E-value=0.25 Score=58.37 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=34.5
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARERVG 175 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~~G 175 (661)
.++|+|||+|..|+-+|..|++.|.+|+|+|+++++.
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 4789999999999999999999999999999998765
No 375
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=88.15 E-value=0.39 Score=54.98 Aligned_cols=38 Identities=13% Similarity=0.256 Sum_probs=34.2
Q ss_pred CCCcEEEEc--cChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIG--AGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG--~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..++|+||| +|..|+-+|..|++.|.+|+|+++.+ +..
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~ 566 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN 566 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc
Confidence 467899999 99999999999999999999999987 553
No 376
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=87.98 E-value=0.39 Score=49.01 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=30.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..++|+|||+|.+|+-+|..|++.| +|+++.++.
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 4689999999999999999999998 699998873
No 377
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=87.97 E-value=0.41 Score=48.19 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=31.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|.|||+|.-|...|..|.+.|++|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3689999999999999999999999999998874
No 378
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=87.91 E-value=0.34 Score=48.23 Aligned_cols=36 Identities=14% Similarity=0.223 Sum_probs=32.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~~ 173 (661)
..++|+|||+|-+|.++|+.|.+.|. +|+|+.|...
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 45789999999999999999999999 8999987753
No 379
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.90 E-value=0.41 Score=46.88 Aligned_cols=34 Identities=24% Similarity=0.497 Sum_probs=30.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
.++|+|||+|-.|..+|..|++.|. +++|++...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999998 899998753
No 380
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=87.87 E-value=0.51 Score=48.94 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=31.9
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
-..++|+|+|+|..|..+|..|.+.|.+|++.+..
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 35688999999999999999999999999999864
No 381
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=87.79 E-value=0.54 Score=47.62 Aligned_cols=33 Identities=30% Similarity=0.544 Sum_probs=30.2
Q ss_pred CcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
.+|+|||||..|.+.|..|+..|+ +|+++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999997 999999764
No 382
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=87.78 E-value=0.35 Score=46.33 Aligned_cols=35 Identities=23% Similarity=0.261 Sum_probs=31.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEE-EcCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVV-LEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v-~e~~~~ 173 (661)
..+|.|||+|.-|.+.|..|.+.|++|++ ++++..
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 46899999999999999999999999999 777643
No 383
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=87.64 E-value=0.4 Score=48.98 Aligned_cols=30 Identities=30% Similarity=0.359 Sum_probs=29.0
Q ss_pred cEEEEccChHHHHHHHHHHHCCCcEEEEcC
Q psy6038 141 KVIVIGAGISGLAAARHMEQFGIEVVVLEA 170 (661)
Q Consensus 141 ~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~ 170 (661)
+|.|||+|.-|.+.|..|.+.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 384
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=87.63 E-value=0.5 Score=48.02 Aligned_cols=33 Identities=36% Similarity=0.518 Sum_probs=31.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI-EVVVLEAR 171 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~ 171 (661)
.++|+|||+|..|.+.|+.|++.|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4689999999999999999999999 99999986
No 385
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.61 E-value=0.51 Score=48.87 Aligned_cols=35 Identities=29% Similarity=0.364 Sum_probs=31.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..++|.|||.|.-|...|..|.+.|++|++++++.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34789999999999999999999999999999874
No 386
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=87.49 E-value=0.72 Score=47.04 Aligned_cols=35 Identities=26% Similarity=0.385 Sum_probs=31.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI--EVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~ 172 (661)
...+|+|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 56799999999999999999999998 899999854
No 387
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=87.48 E-value=0.48 Score=50.25 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=31.0
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
...+|+|||+|.-|+..|..|++ |++|+++++...
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 34689999999999999999998 999999998743
No 388
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=87.43 E-value=1.1 Score=51.12 Aligned_cols=37 Identities=30% Similarity=0.440 Sum_probs=33.0
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
..-++|.|||||.-|-.-|+.+++.|++|+++|..+.
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred ccccEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 3457999999999999999999999999999997653
No 389
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=87.42 E-value=0.39 Score=47.82 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=31.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|+|||+|-.|.+.|..|.+.|++|+|+.++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999998863
No 390
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.38 E-value=0.53 Score=45.25 Aligned_cols=37 Identities=24% Similarity=0.295 Sum_probs=31.9
Q ss_pred CCCCcEEEEcc-ChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 137 KKSGKVIVIGA-GISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 137 ~~~~~v~iiG~-G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
-+.++|+|.|| |.-|...+.+|.+.|++|+++.++..
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 45688999998 99999999999999999999987643
No 391
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=87.25 E-value=0.65 Score=47.05 Aligned_cols=35 Identities=20% Similarity=0.352 Sum_probs=31.9
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
..+|.|||+|.-|...|..|.+.|++|++++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 392
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=87.21 E-value=0.51 Score=44.61 Aligned_cols=32 Identities=34% Similarity=0.517 Sum_probs=29.7
Q ss_pred cEEEEc-cChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 141 KVIVIG-AGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 141 ~v~iiG-~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
+|+||| +|..|...|..|.+.|++|++++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999998763
No 393
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.12 E-value=0.64 Score=47.52 Aligned_cols=36 Identities=22% Similarity=0.375 Sum_probs=31.9
Q ss_pred CCCCCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCC
Q psy6038 136 VKKSGKVIVIGAGISGLAAARHMEQFGI--EVVVLEAR 171 (661)
Q Consensus 136 ~~~~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~ 171 (661)
.....+|+|||+|..|.+.|+.|+.+|+ +++++|..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 3456899999999999999999999998 89999975
No 394
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=87.10 E-value=0.63 Score=46.20 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=31.5
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
..++|+|+|+|-+|.++|+.|.+.|. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 46889999999999999999999996 899998763
No 395
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=87.10 E-value=0.46 Score=48.35 Aligned_cols=35 Identities=14% Similarity=0.128 Sum_probs=32.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCC-CcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFG-IEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g-~~v~v~e~~~ 172 (661)
..++|.|||.|.-|.+.|..|++.| ++|++++++.
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3468999999999999999999999 9999999885
No 396
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.08 E-value=0.6 Score=47.33 Aligned_cols=32 Identities=38% Similarity=0.517 Sum_probs=29.4
Q ss_pred cEEEEccChHHHHHHHHHHHC--CCcEEEEcCCC
Q psy6038 141 KVIVIGAGISGLAAARHMEQF--GIEVVVLEARE 172 (661)
Q Consensus 141 ~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~ 172 (661)
+|+|||+|..|.+.|..|++. |++|++++...
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 799999999999999999985 78999999874
No 397
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=87.01 E-value=0.49 Score=50.80 Aligned_cols=38 Identities=34% Similarity=0.496 Sum_probs=31.8
Q ss_pred CCCcEEEEccChHHHHHHHHHHHC--------------------CC-cEEEEcCCCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQF--------------------GI-EVVVLEARERVG 175 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~--------------------g~-~v~v~e~~~~~G 175 (661)
..++|+|||+|..|+-+|..|++. |. +|+|+++++.+.
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~ 204 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQ 204 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhh
Confidence 467899999999999999999974 54 899999876543
No 398
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=86.98 E-value=0.5 Score=47.69 Aligned_cols=35 Identities=31% Similarity=0.529 Sum_probs=30.8
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI--EVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~~ 173 (661)
..+|+|||||..|.+.|+.|+.+|+ +|+++|....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 4789999999999999999999999 9999998764
No 399
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=86.97 E-value=0.57 Score=47.50 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=31.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEAR 171 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~ 171 (661)
..++|+|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 46789999999999999999999998 89999876
No 400
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.96 E-value=0.58 Score=50.50 Aligned_cols=36 Identities=31% Similarity=0.333 Sum_probs=33.0
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
...++|+|||+|..|..+|..|...|.+|+++|+.+
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457899999999999999999999999999999864
No 401
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=86.88 E-value=0.79 Score=46.42 Aligned_cols=35 Identities=26% Similarity=0.261 Sum_probs=30.8
Q ss_pred CCCCcEEEEccC-hHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 137 KKSGKVIVIGAG-ISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 137 ~~~~~v~iiG~G-~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
-.+++|+|||+| +.|..+|..|...|..|+|+.++
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 457899999999 67999999999999999988654
No 402
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=86.87 E-value=0.64 Score=46.41 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=31.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
..++|+|+|+|-+|.++|+.|++.|. +|+|+.|..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 46789999999999999999999999 699997763
No 403
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=86.87 E-value=0.62 Score=47.41 Aligned_cols=34 Identities=35% Similarity=0.477 Sum_probs=30.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI--EVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~ 172 (661)
..+|+|||+|-.|.+.|+.|+..|+ +++++|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 899999763
No 404
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=86.68 E-value=0.51 Score=56.17 Aligned_cols=35 Identities=29% Similarity=0.404 Sum_probs=32.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~~ 173 (661)
.++|+|||||..|+-+|..|.+.|. +|+|++++++
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 4589999999999999999999997 8999999873
No 405
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=86.65 E-value=0.43 Score=51.86 Aligned_cols=35 Identities=14% Similarity=0.274 Sum_probs=31.2
Q ss_pred CCCcEEEEccChHHHH-HHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLA-AARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~-aa~~l~~~g~~v~v~e~~~ 172 (661)
+.++|.|||.|-+|++ +|..|.++|++|++.|.+.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 4578999999999997 6999999999999999764
No 406
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=86.62 E-value=0.68 Score=52.66 Aligned_cols=62 Identities=18% Similarity=0.199 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHhhHHhcCCccccCCCCCCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 108 QLVSRLHCYLERHGYINFGIFQRITPIPVKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.....++.|+.+....... ..... +...-++|.|||+|.-|..-|..|++.|++|++++++.
T Consensus 286 ~~~~~~~aF~~kr~~~~~~--~~~~~-~~~~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 286 ASNCLIGLFLNDQELKKKA--KVYDK-IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHH--HHHHT-TCCCCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred hHHHHHHHHHhhhhhhccc--cCCCC-ccccCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 3344667777665543310 00011 12334679999999999999999999999999999864
No 407
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=86.55 E-value=0.56 Score=46.75 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=31.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
..++|+|||+|-+|.++|+.|.+.|. +|+|+.|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 46789999999999999999999998 899998764
No 408
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=86.54 E-value=0.58 Score=49.40 Aligned_cols=36 Identities=31% Similarity=0.354 Sum_probs=33.0
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
-.+++|+|||.|..|..+|..|...|.+|+++|..+
T Consensus 209 L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 209 IAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 347899999999999999999999999999999864
No 409
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.47 E-value=0.3 Score=47.21 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=30.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
...+|+|+|+|..|...|..|.+.|+ |+++|++..
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 45689999999999999999999999 999998653
No 410
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=86.34 E-value=0.63 Score=46.80 Aligned_cols=35 Identities=23% Similarity=0.394 Sum_probs=31.7
Q ss_pred CCcEEEEc-cChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 139 SGKVIVIG-AGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG-~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
.++|.||| +|.-|.+.|..|.+.|++|++++++..
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 45899999 999999999999999999999987653
No 411
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.31 E-value=0.78 Score=46.56 Aligned_cols=34 Identities=18% Similarity=0.400 Sum_probs=31.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI--EVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~ 172 (661)
.++|.|||+|.-|.+.|..|.+.|+ +|++++++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4789999999999999999999999 999999875
No 412
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=86.24 E-value=0.54 Score=47.69 Aligned_cols=34 Identities=26% Similarity=0.310 Sum_probs=30.7
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEAR 171 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~ 171 (661)
..++|.|||.|.-|...|..|++.|+ +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 34689999999999999999999999 99999996
No 413
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=86.16 E-value=0.52 Score=49.73 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=29.0
Q ss_pred cEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 141 KVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 141 ~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
+|.|||+|..|+..|..|++ |++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999864
No 414
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=86.16 E-value=0.66 Score=47.35 Aligned_cols=35 Identities=37% Similarity=0.545 Sum_probs=31.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI--EVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~ 172 (661)
...+|+|||+|..|.+.|+.|+..|+ +++++|...
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 35689999999999999999999998 899999753
No 415
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=86.14 E-value=0.48 Score=47.72 Aligned_cols=36 Identities=28% Similarity=0.350 Sum_probs=29.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
+.++|.+||-|.-|..-|..|.++||+|++++++..
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 346899999999999999999999999999987653
No 416
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=86.12 E-value=0.59 Score=49.34 Aligned_cols=35 Identities=29% Similarity=0.453 Sum_probs=32.0
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
.+++|+|||+|..|..+|..|...|. +|+++.+..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 46789999999999999999999999 899998864
No 417
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=86.03 E-value=0.67 Score=52.61 Aligned_cols=39 Identities=26% Similarity=0.274 Sum_probs=34.9
Q ss_pred CCCcEEEEc--cChHHHHHHHHHHHCCCcEEEEcCCCCCCC
Q psy6038 138 KSGKVIVIG--AGISGLAAARHMEQFGIEVVVLEARERVGG 176 (661)
Q Consensus 138 ~~~~v~iiG--~G~aGl~aa~~l~~~g~~v~v~e~~~~~GG 176 (661)
..++|+||| +|..|+-+|..|++.|.+|+++++.+.+..
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~ 562 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSS 562 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTG
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccc
Confidence 456899999 999999999999999999999999877654
No 418
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=86.02 E-value=0.7 Score=45.78 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=29.9
Q ss_pred cEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 141 KVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 141 ~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
+|.|||+|.-|.+.|..|.+.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999998864
No 419
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=86.01 E-value=0.68 Score=46.18 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=31.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
..++|+|+|+|-+|.+.|+.|.+.|. +|+|+.|..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 46789999999999999999999996 999998763
No 420
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=85.96 E-value=0.74 Score=45.16 Aligned_cols=34 Identities=29% Similarity=0.444 Sum_probs=31.0
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
.. +|+|||+|-+|.++++.|.+.|. +|+|+.|..
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 35 89999999999999999999998 899998864
No 421
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=85.88 E-value=0.81 Score=45.34 Aligned_cols=35 Identities=31% Similarity=0.455 Sum_probs=31.6
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
.++|+|+|+|..|...+..|.+.|++|+++.++..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 46899999999999999999999999999987643
No 422
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=85.80 E-value=0.59 Score=46.73 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=30.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..++|+|+|+|-.|.+.|+.|++.| +|+|+.++.
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 3568999999999999999999999 999998763
No 423
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=85.72 E-value=0.86 Score=46.36 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=31.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI-EVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~~ 172 (661)
..+|+|||+|..|.+.|+.|+..|+ +++++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4689999999999999999999998 999999875
No 424
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=85.68 E-value=0.53 Score=51.76 Aligned_cols=35 Identities=26% Similarity=0.437 Sum_probs=32.4
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..++|+|||+|.+|+-.|..|++.|.+|+++++.+
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 46899999999999999999999999999999865
No 425
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=85.68 E-value=0.6 Score=47.52 Aligned_cols=33 Identities=24% Similarity=0.384 Sum_probs=30.3
Q ss_pred CcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGI--EVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~ 172 (661)
++|+|||+|..|.+.|..|++.|+ +|+++++..
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 369999999999999999999999 999999863
No 426
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=85.67 E-value=0.65 Score=45.98 Aligned_cols=34 Identities=15% Similarity=0.339 Sum_probs=31.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|+|+|||.-|...+.+|.++|++|+++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4789999999999999999999999999998764
No 427
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=85.66 E-value=0.75 Score=45.66 Aligned_cols=33 Identities=18% Similarity=0.426 Sum_probs=30.4
Q ss_pred CcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGI--EVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~ 172 (661)
++|.|||+|.-|.+.|..|.+.|+ +|++++++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 479999999999999999999999 999999864
No 428
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=85.64 E-value=0.68 Score=48.93 Aligned_cols=36 Identities=25% Similarity=0.277 Sum_probs=33.0
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
-.+++|+|||.|..|..+|..|...|.+|+++|..+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 457899999999999999999999999999999764
No 429
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=85.59 E-value=0.76 Score=46.53 Aligned_cols=34 Identities=21% Similarity=0.407 Sum_probs=31.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEAR 171 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~ 171 (661)
..++|+|+|||-+|.++|+.|++.|. +|+|+-|.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 46789999999999999999999998 79999876
No 430
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=85.52 E-value=0.44 Score=49.48 Aligned_cols=32 Identities=34% Similarity=0.385 Sum_probs=30.2
Q ss_pred cEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 141 KVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 141 ~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
+|.|||+|.-|.+.|..|++.|++|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999998864
No 431
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=85.39 E-value=0.7 Score=46.35 Aligned_cols=34 Identities=29% Similarity=0.332 Sum_probs=31.1
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..+|.|||+|.-|...|..|.+.|++|++++++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999998864
No 432
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=85.33 E-value=0.75 Score=46.88 Aligned_cols=35 Identities=34% Similarity=0.459 Sum_probs=31.4
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGI--EVVVLEAR 171 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~ 171 (661)
....+|+|||+|..|.+.|+.|+..|+ +++++|..
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 345789999999999999999999998 89999975
No 433
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=85.32 E-value=0.71 Score=46.18 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=30.0
Q ss_pred cEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 141 KVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 141 ~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
+|.|||+|.-|...|..|.+.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998864
No 434
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=85.30 E-value=0.67 Score=45.45 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=29.8
Q ss_pred cEEEEccChHHHHHHHHHHHCC-CcEEEEcCCC
Q psy6038 141 KVIVIGAGISGLAAARHMEQFG-IEVVVLEARE 172 (661)
Q Consensus 141 ~v~iiG~G~aGl~aa~~l~~~g-~~v~v~e~~~ 172 (661)
+|.|||+|.-|.+.|..|.+.| ++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 9999999864
No 435
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.13 E-value=0.85 Score=49.46 Aligned_cols=35 Identities=17% Similarity=0.244 Sum_probs=32.2
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
...+|.|||+|.-|...|..|+++|++|++++++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999864
No 436
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=85.07 E-value=0.87 Score=44.79 Aligned_cols=32 Identities=34% Similarity=0.467 Sum_probs=30.1
Q ss_pred cEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 141 KVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 141 ~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
+|+|||+|-.|.+.|..|.+.|++|+|+.++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999998874
No 437
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=85.01 E-value=0.7 Score=49.94 Aligned_cols=35 Identities=20% Similarity=0.336 Sum_probs=31.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.+++|.|||+|.-|.+-|..|+++|++|++++++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35689999999999999999999999999998863
No 438
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=84.93 E-value=0.81 Score=45.62 Aligned_cols=33 Identities=21% Similarity=0.362 Sum_probs=30.9
Q ss_pred CcEEEEcc-ChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGA-GISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~-G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.+|.|||+ |.-|.+.|..|.+.|++|++++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 58999999 9999999999999999999999864
No 439
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=84.89 E-value=0.73 Score=46.16 Aligned_cols=33 Identities=30% Similarity=0.406 Sum_probs=30.7
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.+|.|||+|.-|...|..|.+.|++|++++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999998864
No 440
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=84.89 E-value=1 Score=43.83 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=30.8
Q ss_pred CcEEEEccChHHHHHHHHHHHCCC----cEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGI----EVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~----~v~v~e~~~ 172 (661)
++|.|||+|.-|.+-|..|.+.|+ +|++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999874
No 441
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=84.80 E-value=0.96 Score=46.31 Aligned_cols=37 Identities=19% Similarity=0.339 Sum_probs=33.6
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
-..++|.|||.|..|...|..|+..|++|++++++..
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 4567899999999999999999999999999998754
No 442
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=84.75 E-value=0.88 Score=45.43 Aligned_cols=34 Identities=29% Similarity=0.439 Sum_probs=31.0
Q ss_pred CCCcEEEEc-cChHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 138 KSGKVIVIG-AGISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 138 ~~~~v~iiG-~G~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
..++|+|+| +|-.|.++|..|++.|.+|+++.++
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 357899999 9999999999999999999999876
No 443
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=84.71 E-value=0.7 Score=46.74 Aligned_cols=33 Identities=33% Similarity=0.431 Sum_probs=30.2
Q ss_pred CcEEEEccChHHHHHHHHHHHCC--CcEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFG--IEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g--~~v~v~e~~~ 172 (661)
++|+|||+|..|.+.|..|++.| ++|+++++..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999999 7999999864
No 444
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=84.69 E-value=0.54 Score=47.47 Aligned_cols=31 Identities=26% Similarity=0.231 Sum_probs=29.3
Q ss_pred CcEEEEccChHHHHHHHHHHHC-----C-CcEEEEcC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQF-----G-IEVVVLEA 170 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~-----g-~~v~v~e~ 170 (661)
.+|.|||+|.-|.+.|..|.+. | ++|+++.+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5799999999999999999999 9 99999987
No 445
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=84.64 E-value=0.95 Score=46.60 Aligned_cols=35 Identities=23% Similarity=0.285 Sum_probs=32.3
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
-..++|+|+|.|..|..+|..|...|.+|++.+..
T Consensus 173 L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~ 207 (355)
T 1c1d_A 173 LDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTD 207 (355)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999999999999999999999999865
No 446
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=84.62 E-value=0.86 Score=45.16 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=30.4
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI-EVVVLEAR 171 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~ 171 (661)
.++|+|||+|-+|-++++.|.+.|. +|+|+-|.
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4689999999999999999999997 89999876
No 447
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=84.57 E-value=0.71 Score=45.90 Aligned_cols=32 Identities=28% Similarity=0.387 Sum_probs=29.4
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
++|.|||+|.-|...|..|.+ |++|++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 469999999999999999999 99999998864
No 448
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=84.51 E-value=1 Score=46.29 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=31.6
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|.|||.|.-|-+-|..|.+.|++|++++++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999999875
No 449
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=84.45 E-value=0.96 Score=42.60 Aligned_cols=33 Identities=27% Similarity=0.330 Sum_probs=29.8
Q ss_pred CcEEEEcc-ChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGA-GISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~-G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
++|+|+|| |..|...+..|.++|++|+++.|+.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 36999995 9999999999999999999998864
No 450
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=84.19 E-value=0.99 Score=46.30 Aligned_cols=34 Identities=32% Similarity=0.411 Sum_probs=31.3
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|.|||+|.-|.+.|..|.+.|++|++++++.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 4579999999999999999999999999998875
No 451
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=84.17 E-value=0.94 Score=48.84 Aligned_cols=34 Identities=18% Similarity=0.335 Sum_probs=31.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.++|.|||.|.-|..-|..|+++|++|++++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 452
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=84.14 E-value=0.36 Score=46.60 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=31.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
...+|.|||+|.-|-+-|..|.++|++|+++.+.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 3468999999999999999999999999999884
No 453
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=83.97 E-value=0.54 Score=48.48 Aligned_cols=34 Identities=26% Similarity=0.262 Sum_probs=31.6
Q ss_pred CcEEEEccChHHHHHHHHHHHCC-------CcEEEEcCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFG-------IEVVVLEARER 173 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g-------~~v~v~e~~~~ 173 (661)
++|.|||+|.-|.+.|..|++.| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 58999999999999999999999 99999998765
No 454
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=83.96 E-value=0.88 Score=44.51 Aligned_cols=34 Identities=21% Similarity=0.240 Sum_probs=31.0
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
..+|.|||+|.-|..-|..|.+.|++|.+++++.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 3589999999999999999999999999998864
No 455
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=83.94 E-value=0.78 Score=48.64 Aligned_cols=32 Identities=31% Similarity=0.536 Sum_probs=29.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC---cEEEEc
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI---EVVVLE 169 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~---~v~v~e 169 (661)
..++|+|+|||-||.++|+.|.+.|. +|+|++
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 45789999999999999999999998 899999
No 456
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=83.78 E-value=0.87 Score=49.19 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=30.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHC--CCcEEEEcCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQF--GIEVVVLEAR 171 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~ 171 (661)
..+|.|||+|.-|+..|..|+++ |++|++++++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 35899999999999999999998 7999999875
No 457
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=83.74 E-value=0.91 Score=44.42 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=31.1
Q ss_pred CcEEEEccChHHHHHHHHHHHCC----CcEEEEcCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFG----IEVVVLEARER 173 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g----~~v~v~e~~~~ 173 (661)
.+|.|||+|.-|.+-|..|.+.| ++|++++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 57999999999999999999999 79999998765
No 458
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=83.73 E-value=0.85 Score=45.79 Aligned_cols=33 Identities=24% Similarity=0.166 Sum_probs=30.2
Q ss_pred CcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGI--EVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~ 172 (661)
.+|+|||||..|.+.|+.|++.|+ +|++++...
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 379999999999999999999998 899999864
No 459
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=83.65 E-value=0.65 Score=48.38 Aligned_cols=34 Identities=21% Similarity=0.140 Sum_probs=31.3
Q ss_pred CcEEEEccChHHHHHHHHHHHCC-------CcEEEEcCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFG-------IEVVVLEARER 173 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g-------~~v~v~e~~~~ 173 (661)
++|.|||+|.-|.+.|..|++.| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998765
No 460
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=83.61 E-value=0.94 Score=46.23 Aligned_cols=38 Identities=24% Similarity=0.306 Sum_probs=30.8
Q ss_pred CCCCCcEEEEcc-ChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 136 VKKSGKVIVIGA-GISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 136 ~~~~~~v~iiG~-G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
..+.++|+|.|| |.-|...+..|.+.|++|+++.+...
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 456789999998 99999999999999999999988754
No 461
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=83.56 E-value=1 Score=46.11 Aligned_cols=36 Identities=31% Similarity=0.517 Sum_probs=32.9
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
-..++|.|||.|..|...|..|...|++|++++++.
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 456789999999999999999999999999999764
No 462
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=83.43 E-value=1.3 Score=45.43 Aligned_cols=37 Identities=35% Similarity=0.346 Sum_probs=32.2
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
....+|+|+|+|..|+.|+..++..|.+|++.++++.
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~ 211 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEH 211 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSST
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4567899999999999999999999999999987643
No 463
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=83.42 E-value=0.66 Score=46.35 Aligned_cols=32 Identities=28% Similarity=0.290 Sum_probs=29.6
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.+|.|||+|.-|...|..|.+.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 589999999999999999999999999998 54
No 464
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=83.41 E-value=1.2 Score=45.66 Aligned_cols=37 Identities=27% Similarity=0.394 Sum_probs=33.4
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
-..++|.|||.|.-|...|..|...|++|+++++...
T Consensus 162 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~ 198 (333)
T 3ba1_A 162 FSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKK 198 (333)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCch
Confidence 4567899999999999999999999999999998754
No 465
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=83.33 E-value=1.1 Score=44.20 Aligned_cols=35 Identities=11% Similarity=0.171 Sum_probs=31.1
Q ss_pred CCCCcEEEEccC-hHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 137 KKSGKVIVIGAG-ISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 137 ~~~~~v~iiG~G-~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
-.+++|+|||+| +.|..+|..|.+.|..|+|+.++
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 457899999976 79999999999999999999764
No 466
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=83.22 E-value=1.1 Score=46.84 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=32.8
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
..+++|.|||+|..|...|..+.+.|++|++++....
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 3567999999999999999999999999999987543
No 467
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=83.21 E-value=1.3 Score=44.02 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=31.7
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCC---cEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGI---EVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~---~v~v~e~~~~ 173 (661)
.++|.|||+|.-|-+-|..|.+.|+ +|++++++..
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 4689999999999999999999999 9999998753
No 468
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=83.19 E-value=0.83 Score=49.19 Aligned_cols=33 Identities=30% Similarity=0.482 Sum_probs=30.4
Q ss_pred CcEEEEccChHHHHHHHHHHHC--CCcEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQF--GIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~--g~~v~v~e~~~ 172 (661)
++|.|||+|.-|+..|..|+++ |++|++++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999999 89999998863
No 469
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=83.18 E-value=1.1 Score=41.55 Aligned_cols=33 Identities=36% Similarity=0.510 Sum_probs=30.6
Q ss_pred CcEEEEcc-ChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGA-GISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~-G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
++|+|+|| |..|...+.+|.+.|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999998 9999999999999999999998864
No 470
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=83.15 E-value=1.2 Score=44.54 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=31.0
Q ss_pred CCCCcEEEEcc-ChHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 137 KKSGKVIVIGA-GISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 137 ~~~~~v~iiG~-G~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
-.+++|+|||+ |+.|..+|..|.+.|..|+|+.++
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 46789999996 469999999999999999999874
No 471
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=83.14 E-value=1.1 Score=45.36 Aligned_cols=35 Identities=37% Similarity=0.625 Sum_probs=30.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI--EVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~ 172 (661)
+..+|+|||+|..|-+.|+.|+..|. +|+++|...
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 34689999999999999999998886 899999863
No 472
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=83.06 E-value=0.93 Score=48.09 Aligned_cols=36 Identities=22% Similarity=0.512 Sum_probs=31.6
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
...+..|||.|.-|+..|..|+++|++|++++++..
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 356899999999999999999999999999998753
No 473
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=83.04 E-value=1.1 Score=45.43 Aligned_cols=34 Identities=26% Similarity=0.260 Sum_probs=31.2
Q ss_pred CCcEEEEccChHHHHHHHHHHHCC----CcEEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFG----IEVVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g----~~v~v~e~~~ 172 (661)
..+|.|||+|.-|.+-|..|.+.| ++|++++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 457999999999999999999999 8999999875
No 474
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=82.99 E-value=1 Score=48.59 Aligned_cols=33 Identities=18% Similarity=0.343 Sum_probs=30.7
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.+|.|||+|.-|..-|..|+++|++|+++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999998864
No 475
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=82.80 E-value=1.2 Score=42.17 Aligned_cols=32 Identities=31% Similarity=0.436 Sum_probs=29.5
Q ss_pred cEEEEcc-ChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 141 KVIVIGA-GISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 141 ~v~iiG~-G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
+|+|+|| |..|...+.+|.+.|++|+++.|+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 6999998 9999999999999999999998763
No 476
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=82.59 E-value=1 Score=45.60 Aligned_cols=33 Identities=36% Similarity=0.547 Sum_probs=30.1
Q ss_pred CcEEEEccChHHHHHHHHHHHCCC--cEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGI--EVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~~ 172 (661)
.+|+|||+|..|.+.|+.|++.|+ +++++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 379999999999999999999998 899999865
No 477
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=82.54 E-value=0.92 Score=44.56 Aligned_cols=34 Identities=26% Similarity=0.375 Sum_probs=30.6
Q ss_pred CCcEEEEccChHHHHHHHHHHHCCCc-EEEEcCCC
Q psy6038 139 SGKVIVIGAGISGLAAARHMEQFGIE-VVVLEARE 172 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~aa~~l~~~g~~-v~v~e~~~ 172 (661)
..+|.|||+|.-|...|..|.+.|++ |.+++++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 35799999999999999999999999 89998864
No 478
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=82.45 E-value=0.85 Score=49.61 Aligned_cols=36 Identities=25% Similarity=0.466 Sum_probs=30.2
Q ss_pred CcEEEEccChHHHHHHHHHHHCC--------------CcEEEEcCCCCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFG--------------IEVVVLEARERVG 175 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g--------------~~v~v~e~~~~~G 175 (661)
.+++|||||++|+-.|..|++.+ .+|+++|+.+++-
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc
Confidence 57999999999999998887543 5799999988764
No 479
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=82.39 E-value=1.5 Score=44.79 Aligned_cols=38 Identities=26% Similarity=0.403 Sum_probs=34.1
Q ss_pred CCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 136 VKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 136 ~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
.-.+++|.|||.|.-|...|..|...|++|+++++...
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~ 180 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRK 180 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 34578999999999999999999999999999998764
No 480
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=82.21 E-value=1 Score=44.13 Aligned_cols=30 Identities=30% Similarity=0.328 Sum_probs=28.1
Q ss_pred cEEEEccChHHHHHHHHHHHCCCcEEEEcC
Q psy6038 141 KVIVIGAGISGLAAARHMEQFGIEVVVLEA 170 (661)
Q Consensus 141 ~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~ 170 (661)
+|.|||+|.-|..-|..|.+.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 699999999999999999999999999865
No 481
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=82.11 E-value=1.2 Score=43.55 Aligned_cols=34 Identities=26% Similarity=0.413 Sum_probs=30.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEAR 171 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~ 171 (661)
...+|+|||+|-.|-.+|..|++.|. +++|++..
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35789999999999999999999998 78888865
No 482
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=81.97 E-value=1.4 Score=43.98 Aligned_cols=35 Identities=14% Similarity=0.177 Sum_probs=31.2
Q ss_pred CCCCcEEEEccC-hHHHHHHHHHHHCCCcEEEEcCC
Q psy6038 137 KKSGKVIVIGAG-ISGLAAARHMEQFGIEVVVLEAR 171 (661)
Q Consensus 137 ~~~~~v~iiG~G-~aGl~aa~~l~~~g~~v~v~e~~ 171 (661)
-.+++|+|||+| +.|.-+|..|.+.|..|+|+.++
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 457899999999 68999999999999999999644
No 483
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=81.95 E-value=1.4 Score=45.03 Aligned_cols=34 Identities=26% Similarity=0.576 Sum_probs=30.3
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEAR 171 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~ 171 (661)
...+|+|||+|-.|-.+|.+|++.|. +++|++..
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 46789999999999999999999998 78888764
No 484
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=81.89 E-value=1.7 Score=44.53 Aligned_cols=34 Identities=18% Similarity=0.388 Sum_probs=30.3
Q ss_pred CCCcEEEEcc-ChHHHHHHHHHHHCCC--cEEEEcCC
Q psy6038 138 KSGKVIVIGA-GISGLAAARHMEQFGI--EVVVLEAR 171 (661)
Q Consensus 138 ~~~~v~iiG~-G~aGl~aa~~l~~~g~--~v~v~e~~ 171 (661)
...+|+|||+ |-.|.++|+.|..+|. +|+++|..
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 3578999997 9999999999999995 89999975
No 485
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=81.77 E-value=1.5 Score=43.94 Aligned_cols=36 Identities=28% Similarity=0.389 Sum_probs=32.2
Q ss_pred CCCcEEEEcc-ChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGA-GISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~-G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
+.++|+|.|| |..|...+.+|.+.|++|+++.+...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3578999998 99999999999999999999988765
No 486
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=81.72 E-value=1.3 Score=45.04 Aligned_cols=34 Identities=32% Similarity=0.514 Sum_probs=30.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC--cEEEEcCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI--EVVVLEAR 171 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~--~v~v~e~~ 171 (661)
+..+|+|||||..|.+.|+.|+..|+ ++.+++..
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999885 89999865
No 487
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.38 E-value=1.2 Score=48.02 Aligned_cols=33 Identities=27% Similarity=0.379 Sum_probs=30.5
Q ss_pred CcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
.+|.|||+|.-|...|..|+++|++|++++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999998863
No 488
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=81.35 E-value=1.6 Score=45.47 Aligned_cols=49 Identities=12% Similarity=0.199 Sum_probs=38.5
Q ss_pred HHHHHHhc--cCceeeCceEEEEEecCCce--EEEEeCCCCCCCCeEEEeCEEEEccCh
Q psy6038 411 CVPTALAE--GLDVHFNSSVTEIHYNSKGV--TVKTVDPKTGQNETVYTGDRVLCTLPL 465 (661)
Q Consensus 411 ~L~~aLa~--~L~I~lnt~V~~I~~~~~gv--~V~~~~~~~~~~g~~i~AD~VV~TvP~ 465 (661)
.|.+.+.+ +++|+++++|++|+.+++++ .|++.+ |++++||.||.|.-.
T Consensus 112 ~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~------g~~~~ad~vV~AdG~ 164 (399)
T 2x3n_A 112 LVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLND------GRVLRPRVVVGADGI 164 (399)
T ss_dssp HHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETT------SCEEEEEEEEECCCT
T ss_pred HHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECC------CCEEECCEEEECCCC
Confidence 34444444 56899999999999988888 787754 678999999999765
No 489
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=81.29 E-value=0.9 Score=47.79 Aligned_cols=31 Identities=32% Similarity=0.301 Sum_probs=28.4
Q ss_pred CcEEEEccChHHHHHHHHHHH-CCCcEEEEcC
Q psy6038 140 GKVIVIGAGISGLAAARHMEQ-FGIEVVVLEA 170 (661)
Q Consensus 140 ~~v~iiG~G~aGl~aa~~l~~-~g~~v~v~e~ 170 (661)
.+|+|||+|.-|.+.|..|++ .|++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 479999999999999999998 5999999983
No 490
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=81.25 E-value=1.1 Score=44.83 Aligned_cols=34 Identities=21% Similarity=0.439 Sum_probs=30.1
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCC-cEEEEcCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGI-EVVVLEAR 171 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~-~v~v~e~~ 171 (661)
...+|+|||+|-.|-.+|.+|++.|. +++|++..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 46799999999999999999999997 78888754
No 491
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=81.17 E-value=1.6 Score=43.55 Aligned_cols=35 Identities=26% Similarity=0.365 Sum_probs=31.0
Q ss_pred CcEEEEcc-ChHHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 140 GKVIVIGA-GISGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 140 ~~v~iiG~-G~aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
++|+|.|| |.-|-..+.+|.++|++|+++-|++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 47999998 999999999999999999999776543
No 492
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=81.16 E-value=3.7 Score=44.79 Aligned_cols=35 Identities=14% Similarity=0.072 Sum_probs=31.1
Q ss_pred CCcEEEEccChHHHHH-HHHHHHCCCcEEEEcCCCC
Q psy6038 139 SGKVIVIGAGISGLAA-ARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 139 ~~~v~iiG~G~aGl~a-a~~l~~~g~~v~v~e~~~~ 173 (661)
.++|.|||.|-+|+++ |+.|.++|++|++.|.+..
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~ 54 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLARALGHTVTGSDANIY 54 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred CCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC
Confidence 4789999999999985 8888999999999998754
No 493
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=81.14 E-value=1.4 Score=47.83 Aligned_cols=35 Identities=14% Similarity=0.274 Sum_probs=31.6
Q ss_pred CCCcEEEEccChHHHH-HHHHHHHCCCcEEEEcCCC
Q psy6038 138 KSGKVIVIGAGISGLA-AARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~-aa~~l~~~g~~v~v~e~~~ 172 (661)
+.++|.|||.|-+|++ +|..|.+.|++|++.|...
T Consensus 18 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 53 (491)
T 2f00_A 18 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 53 (491)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCC
Confidence 3568999999999998 8999999999999999865
No 494
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=80.98 E-value=1.7 Score=43.99 Aligned_cols=38 Identities=13% Similarity=0.218 Sum_probs=33.9
Q ss_pred CCCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 136 VKKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 136 ~~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
.-.+++|.|||.|.-|...|..|...|++|++++++..
T Consensus 139 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~ 176 (313)
T 2ekl_A 139 ELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDI 176 (313)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 34578999999999999999999999999999998653
No 495
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=80.85 E-value=1.5 Score=43.84 Aligned_cols=36 Identities=11% Similarity=0.252 Sum_probs=28.6
Q ss_pred CCcEEEEccCh-HHHHHHHHHHHCCCcEEEEcCCCCC
Q psy6038 139 SGKVIVIGAGI-SGLAAARHMEQFGIEVVVLEARERV 174 (661)
Q Consensus 139 ~~~v~iiG~G~-aGl~aa~~l~~~g~~v~v~e~~~~~ 174 (661)
.++++|||+|. +++.+|..+.+.|.+|+++++.+.+
T Consensus 146 ~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~ 182 (304)
T 4fk1_A 146 DQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL 182 (304)
T ss_dssp TSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC
T ss_pred CCceeeecCCCchhhhHHHHHHhCCceEEEEeccccc
Confidence 45678888775 6788999999999999999875543
No 496
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=80.69 E-value=1.5 Score=47.26 Aligned_cols=36 Identities=25% Similarity=0.286 Sum_probs=33.3
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
-.+++|+|||.|..|..+|..|...|.+|+++++..
T Consensus 275 L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~ 310 (494)
T 3d64_A 275 IAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDP 310 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCH
T ss_pred cCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 457899999999999999999999999999999875
No 497
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=80.55 E-value=1.5 Score=45.15 Aligned_cols=37 Identities=24% Similarity=0.291 Sum_probs=31.8
Q ss_pred CCCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 137 KKSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 137 ~~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
....+|+|+|+|..|+.++..++..|.+|+++++++.
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~ 214 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSR 214 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSST
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 3467899999999999999988889999999986543
No 498
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=80.54 E-value=1.7 Score=43.96 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=32.4
Q ss_pred CCCCCcEEEEcc-ChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 136 VKKSGKVIVIGA-GISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 136 ~~~~~~v~iiG~-G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
...+++|+|.|| |.-|...+.+|.+.|++|+++.+..
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 345678999997 9999999999999999999998754
No 499
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=80.54 E-value=1.2 Score=41.48 Aligned_cols=36 Identities=17% Similarity=0.310 Sum_probs=31.1
Q ss_pred CCCCcEEEEc-cChHHHHHHHHHHHCCCcEEEEcCCC
Q psy6038 137 KKSGKVIVIG-AGISGLAAARHMEQFGIEVVVLEARE 172 (661)
Q Consensus 137 ~~~~~v~iiG-~G~aGl~aa~~l~~~g~~v~v~e~~~ 172 (661)
...++|+|+| +|..|+.++..+...|.+|+++++++
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 73 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 73 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH
Confidence 3467899999 59999999999999999999998753
No 500
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=81.56 E-value=0.33 Score=45.84 Aligned_cols=36 Identities=31% Similarity=0.354 Sum_probs=31.9
Q ss_pred CCCcEEEEccChHHHHHHHHHHHCCCcEEEEcCCCC
Q psy6038 138 KSGKVIVIGAGISGLAAARHMEQFGIEVVVLEARER 173 (661)
Q Consensus 138 ~~~~v~iiG~G~aGl~aa~~l~~~g~~v~v~e~~~~ 173 (661)
..++|.|||+|.-|.+.|..|.+.|++|++++++..
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 346799999999999999999999999999987654
Done!