BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6044
(282 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 437 bits (1123), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/267 (78%), Positives = 235/267 (88%), Gaps = 1/267 (0%)
Query: 7 DRTPNTALAIKGTHLVGN-EGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
+R + +A+K L + EGVPSSALREICLLKELKHKNIVRL+DVLHS+KKLTLVFE
Sbjct: 23 NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82
Query: 66 CDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKL 125
CDQDLKKYFDS NG++D +IVKSF++QLL+GL FCHSRNVLHRDLKPQNLLIN+NGELKL
Sbjct: 83 CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKL 142
Query: 126 ADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPL 185
A+FGLARAFGIPV+CYSAEVVTLWYRPPDVLFGAKLY+TSIDMWSAGCIFAELANAGRPL
Sbjct: 143 ANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
Query: 186 FPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDL 245
FPG+DVDDQLKRIF+LLGTPTE+ WP M LPD+KP+PMY + S V PKL A GRDL
Sbjct: 203 FPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDL 262
Query: 246 LQRLLVCNPVQRMSAEDAMSHIYFSDL 272
LQ LL CNPVQR+SAE+A+ H YFSD
Sbjct: 263 LQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 437 bits (1123), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/267 (78%), Positives = 234/267 (87%), Gaps = 1/267 (0%)
Query: 7 DRTPNTALAIKGTHLVGN-EGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
+R + +A+K L + EGVPSSALREICLLKELKHKNIVRL+DVLHS+KKLTLVFE
Sbjct: 23 NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82
Query: 66 CDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKL 125
CDQDLKKYFDS NG++D +IVKSF++QLL+GL FCHSRNVLHRDLKPQNLLIN+NGELKL
Sbjct: 83 CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKL 142
Query: 126 ADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPL 185
ADFGLARAFGIPV+CYSAEVVTLWYRPPDVLFGAKLY+TSIDMWSAGCIFAELANA RPL
Sbjct: 143 ADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
Query: 186 FPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDL 245
FPG+DVDDQLKRIF+LLGTPTE+ WP M LPD+KP+PMY + S V PKL A GRDL
Sbjct: 203 FPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDL 262
Query: 246 LQRLLVCNPVQRMSAEDAMSHIYFSDL 272
LQ LL CNPVQR+SAE+A+ H YFSD
Sbjct: 263 LQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 306 bits (784), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 153/274 (55%), Positives = 192/274 (70%), Gaps = 4/274 (1%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
G + + +A+K L EG P +A+RE+ LLK+LKH NIV L+D++H+EK LTLVFE
Sbjct: 21 GKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80
Query: 65 HCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELK 124
+ D+DLK+Y D I++ VK F++QLLRGLA+CH + VLHRDLKPQNLLIN+ GELK
Sbjct: 81 YLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELK 140
Query: 125 LADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRP 184
LADFGLARA IP K Y EVVTLWYRPPD+L G+ Y+T IDMW GCIF E+A GRP
Sbjct: 141 LADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMA-TGRP 199
Query: 185 LFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKP--FPMYHPSMSFSQVAPKLTAKG 242
LFPGS V++QL IF++LGTPTE+TWPG+ +FK +P Y S AP+L + G
Sbjct: 200 LFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSH-APRLDSDG 258
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFSDLNVAI 276
DLL +LL R+SAEDAM H +F L I
Sbjct: 259 ADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERI 292
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 305 bits (782), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 145/251 (57%), Positives = 184/251 (73%), Gaps = 3/251 (1%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL 83
+EG+PS+ +REI +LKELKH NIV+LYDV+H++K+L LVFEH DQDLKK D G ++
Sbjct: 40 DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLES 99
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
KSF+ QLL G+A+CH R VLHRDLKPQNLLIN+ GELK+ADFGLARAFGIPV+ Y+
Sbjct: 100 VTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
EVVTLWYR PDVL G+K Y+T+ID+WS GCIFAE+ N G PLFPG DQL RIF++LG
Sbjct: 160 EVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQLMRIFRILG 218
Query: 204 TPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAED 262
TP WP + LP + P F +Y P + + L G DLL ++L +P QR++A+
Sbjct: 219 TPNSKNWPNVTELPKYDPNFTVYEP-LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQ 277
Query: 263 AMSHIYFSDLN 273
A+ H YF + N
Sbjct: 278 ALEHAYFKENN 288
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 305 bits (782), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 145/251 (57%), Positives = 184/251 (73%), Gaps = 3/251 (1%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL 83
+EG+PS+ +REI +LKELKH NIV+LYDV+H++K+L LVFEH DQDLKK D G ++
Sbjct: 40 DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLES 99
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
KSF+ QLL G+A+CH R VLHRDLKPQNLLIN+ GELK+ADFGLARAFGIPV+ Y+
Sbjct: 100 VTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
EVVTLWYR PDVL G+K Y+T+ID+WS GCIFAE+ N G PLFPG DQL RIF++LG
Sbjct: 160 EVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GAPLFPGVSEADQLMRIFRILG 218
Query: 204 TPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAED 262
TP WP + LP + P F +Y P + + L G DLL ++L +P QR++A+
Sbjct: 219 TPNSKNWPNVTELPKYDPNFTVYEP-LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQ 277
Query: 263 AMSHIYFSDLN 273
A+ H YF + N
Sbjct: 278 ALEHAYFKENN 288
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 305 bits (781), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 144/251 (57%), Positives = 184/251 (73%), Gaps = 3/251 (1%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL 83
+EG+PS+ +REI +LKELKH NIV+LYDV+H++K+L LVFEH DQDLKK D G ++
Sbjct: 40 DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLES 99
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
KSF+ QLL G+A+CH R VLHRDLKPQNLLIN+ GELK+ADFGLARAFGIPV+ Y+
Sbjct: 100 VTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
E+VTLWYR PDVL G+K Y+T+ID+WS GCIFAE+ N G PLFPG DQL RIF++LG
Sbjct: 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQLMRIFRILG 218
Query: 204 TPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAED 262
TP WP + LP + P F +Y P + + L G DLL ++L +P QR++A+
Sbjct: 219 TPNSKNWPNVTELPKYDPNFTVYEP-LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQ 277
Query: 263 AMSHIYFSDLN 273
A+ H YF + N
Sbjct: 278 ALEHAYFKENN 288
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 302 bits (773), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/260 (57%), Positives = 190/260 (73%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFEH DQDLKK+ D+ L G I
Sbjct: 45 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTG-I 103
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 104 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 222
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 223 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 281
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 282 KAALAHPFFQDVTKPVPHLR 301
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 300 bits (768), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 149/277 (53%), Positives = 190/277 (68%), Gaps = 11/277 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
G+++T +A+K L EG PS+A+REI L+KELKH+NIVRLYDV+H+E KLTLVFE
Sbjct: 24 GLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83
Query: 65 HCDQDLKKYFDSLN-----GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINK 119
D DLKKY DS ++L++VK F +QLL+GLAFCH +LHRDLKPQNLLINK
Sbjct: 84 FMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINK 143
Query: 120 NGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELA 179
G+LKL DFGLARAFGIPV +S+EVVTLWYR PDVL G++ Y+TSID+WS GCI AE+
Sbjct: 144 RGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMI 203
Query: 180 NAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQV----- 234
G+PLFPG++ ++QLK IF ++GTP E WP + LP + P P QV
Sbjct: 204 -TGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHT 262
Query: 235 APKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSD 271
L D L LL NP R+SA+ A+ H +F++
Sbjct: 263 KEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 299 bits (765), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 189/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFEH QDLK + D+ L G I
Sbjct: 41 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTG-I 99
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 100 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 218
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 277
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 278 KAALAHPFFQDVTKPVPHLR 297
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 297 bits (760), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/253 (58%), Positives = 187/253 (73%), Gaps = 6/253 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 42 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 100
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 161 THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 219
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 261 EDAMSHIYFSDLN 273
+ A++H +F D+
Sbjct: 279 KAALAHPFFQDVT 291
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 296 bits (759), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 189/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 49 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 107
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 108 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 167
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 168 THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 226
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 227 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 285
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 286 KAALAHPFFQDVTKPVPHLR 305
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 296 bits (759), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/262 (56%), Positives = 190/262 (72%), Gaps = 6/262 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 46 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 104
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 105 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 164
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 165 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 223
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 224 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 282
Query: 261 EDAMSHIYFSDLNVAIKSERCQ 282
+ A++H +F D+ + R +
Sbjct: 283 KAALAHPFFQDVTKPVPHLRLE 304
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 296 bits (759), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 189/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 42 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 100
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 219
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 279 KAALAHPFFQDVTKPVPHLR 298
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 296 bits (759), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 189/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 42 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 100
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 219
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 279 KAALAHPFFQDVTKPVPHLR 298
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 296 bits (759), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 189/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 41 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 99
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 100 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 218
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 277
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 278 KAALAHPFFQDVTKPVPHLR 297
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 296 bits (759), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 189/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 41 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 99
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 100 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 218
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 277
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 278 KAALAHPFFQDVTKPVPHLR 297
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 296 bits (759), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 189/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 43 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 101
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 102 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 161
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 162 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 220
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 221 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 279
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 280 KAALAHPFFQDVTKPVPHLR 299
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 296 bits (758), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 189/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 42 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 100
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 219
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 279 KAALAHPFFQDVTKPVPHLR 298
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 296 bits (758), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 189/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 41 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 99
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 100 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 218
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 277
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 278 KAALAHPFFQDVTKPVPHLR 297
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 296 bits (757), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 189/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 49 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 107
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 108 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 167
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 168 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 226
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 227 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 285
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 286 KAALAHPFFQDVTKPVPHLR 305
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 295 bits (756), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 188/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 42 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 100
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 219
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 279 KAALAHPFFQDVTKPVPHLR 298
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 295 bits (756), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 188/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 44 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 102
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 103 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 162
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 221
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 222 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 280
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 281 KAALAHPFFQDVTKPVPHLR 300
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 295 bits (756), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 188/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 41 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 99
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 100 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 160 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 218
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 277
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 278 KAALAHPFFQDVTKPVPHLR 297
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 295 bits (756), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 188/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 46 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 104
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 105 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 164
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 165 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 223
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 224 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 282
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 283 KAALAHPFFQDVTKPVPHLR 302
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 295 bits (756), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/253 (58%), Positives = 186/253 (73%), Gaps = 6/253 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 42 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 100
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 219
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 261 EDAMSHIYFSDLN 273
+ A++H +F D+
Sbjct: 279 KAALAHPFFQDVT 291
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 295 bits (756), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 188/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 43 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 101
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 102 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 161
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 220
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 221 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 279
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 280 KAALAHPFFQDVTKPVPHLR 299
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 295 bits (756), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/253 (58%), Positives = 186/253 (73%), Gaps = 6/253 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 41 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 99
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 100 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 160 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 218
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 219 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 277
Query: 261 EDAMSHIYFSDLN 273
+ A++H +F D+
Sbjct: 278 KAALAHPFFQDVT 290
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 295 bits (756), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/260 (56%), Positives = 189/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 42 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 100
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GL+FCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 101 PLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 219
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 279 KAALAHPFFQDVTKPVPHLR 298
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 295 bits (756), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 188/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 42 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 100
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 219
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 279 KAALAHPFFQDVTKPVPHLR 298
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 295 bits (756), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 188/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 45 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 103
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 104 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 222
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 223 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 281
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 282 KAALAHPFFQDVTKPVPHLR 301
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 295 bits (755), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 188/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 45 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 103
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 104 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 222
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 223 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 281
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 282 KAALAHPFFQDVTKPVPHLR 301
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 295 bits (755), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/260 (56%), Positives = 188/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 44 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 102
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 103 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 162
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 221
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 222 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 280
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 281 KAALAHPFFQDVTKPVPHLR 300
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 295 bits (755), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/253 (58%), Positives = 186/253 (73%), Gaps = 6/253 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 43 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 101
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 102 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 161
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 220
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 221 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 279
Query: 261 EDAMSHIYFSDLN 273
+ A++H +F D+
Sbjct: 280 KAALAHPFFQDVT 292
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 295 bits (754), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/251 (58%), Positives = 185/251 (73%), Gaps = 6/251 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 42 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 100
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 219
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 261 EDAMSHIYFSD 271
+ A++H +F D
Sbjct: 279 KAALAHPFFQD 289
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 294 bits (752), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/260 (56%), Positives = 188/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 44 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 102
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKP+NLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 103 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY 162
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 221
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 222 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 280
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 281 KAALAHPFFQDVTKPVPHLR 300
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 294 bits (752), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/260 (56%), Positives = 188/260 (72%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLKK+ D+ L G I
Sbjct: 43 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG-I 101
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKP+NLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 102 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY 161
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 220
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 221 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 279
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 280 KAALAHPFFQDVTKPVPHLR 299
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 293 bits (751), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 147/260 (56%), Positives = 187/260 (71%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLK + D+ L G I
Sbjct: 45 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTG-I 103
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 104 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 222
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 223 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 281
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 282 KAALAHPFFQDVTKPVPHLR 301
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 292 bits (748), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/253 (57%), Positives = 185/253 (73%), Gaps = 6/253 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE DLKK+ D+ L G I
Sbjct: 43 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG-I 101
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKP+NLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 102 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY 161
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 220
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 221 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 279
Query: 261 EDAMSHIYFSDLN 273
+ A++H +F D+
Sbjct: 280 KAALAHPFFQDVT 292
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/260 (56%), Positives = 187/260 (71%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE DLKK+ D+ L G I
Sbjct: 45 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG-I 103
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKP+NLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 104 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 222
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 223 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 281
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 282 KAALAHPFFQDVTKPVPHLR 301
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 291 bits (746), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/260 (56%), Positives = 187/260 (71%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE QDLK + D+ L G I
Sbjct: 42 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTG-I 100
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKP+NLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 101 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 219
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 279 KAALAHPFFQDVTKPVPHLR 298
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 291 bits (745), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/260 (56%), Positives = 186/260 (71%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE DLK + D+ L G I
Sbjct: 44 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG-I 102
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 103 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 162
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 221
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 222 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 280
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 281 KAALAHPFFQDVTKPVPHLR 300
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 291 bits (745), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/260 (56%), Positives = 186/260 (71%), Gaps = 6/260 (2%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDS--LNGEI 81
EGVPS+A+REI LLKEL H NIV+L DV+H+E KL LVFE DLK + D+ L G I
Sbjct: 45 TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG-I 103
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
L ++KS+++QLL+GLAFCHS VLHRDLKPQNLLIN G +KLADFGLARAFG+PV+ Y
Sbjct: 104 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
EVVTLWYR P++L G K Y+T++D+WS GCIFAE+ R LFPG DQL RIF+
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFRIFRT 222
Query: 202 LGTPTEDTWPGMNLLPDFKP-FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
LGTP E WPG+ +PD+KP FP + FS+V P L GR LL ++L +P +R+SA
Sbjct: 223 LGTPDEVVWPGVTSMPDYKPSFPKW-ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 281
Query: 261 EDAMSHIYFSDLNVAIKSER 280
+ A++H +F D+ + R
Sbjct: 282 KAALAHPFFQDVTKPVPHLR 301
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 285 bits (729), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/255 (56%), Positives = 181/255 (70%), Gaps = 4/255 (1%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL 83
+EG+PS+A+REI LLKEL H NIV L DV+HSE+ LTLVFE ++DLKK D +
Sbjct: 59 DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQD 118
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+K ++YQLLRG+A CH +LHRDLKPQNLLIN +G LKLADFGLARAFGIPV+ Y+
Sbjct: 119 SQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
EVVTLWYR PDVL G+K Y+TS+D+WS GCIFAE+ G+PLFPG DDQL +IF +LG
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMI-TGKPLFPGVTDDDQLPKIFSILG 237
Query: 204 TPTEDTWPGMNLLPDFK--PFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAE 261
TP WP + LP +K F ++ +S + P +G DLL +L +P +R+SA
Sbjct: 238 TPNPREWPQVQELPLWKQRTFQVFEKK-PWSSIIPGFCQEGIDLLSNMLCFDPNKRISAR 296
Query: 262 DAMSHIYFSDLNVAI 276
DAM+H YF DL+ I
Sbjct: 297 DAMNHPYFKDLDPQI 311
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 285 bits (729), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/255 (56%), Positives = 181/255 (70%), Gaps = 4/255 (1%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL 83
+EG+PS+A+REI LLKEL H NIV L DV+HSE+ LTLVFE ++DLKK D +
Sbjct: 59 DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQD 118
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+K ++YQLLRG+A CH +LHRDLKPQNLLIN +G LKLADFGLARAFGIPV+ Y+
Sbjct: 119 SQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
EVVTLWYR PDVL G+K Y+TS+D+WS GCIFAE+ G+PLFPG DDQL +IF +LG
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMI-TGKPLFPGVTDDDQLPKIFSILG 237
Query: 204 TPTEDTWPGMNLLPDFK--PFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAE 261
TP WP + LP +K F ++ +S + P +G DLL +L +P +R+SA
Sbjct: 238 TPNPREWPQVQELPLWKQRTFQVFEKK-PWSSIIPGFCQEGIDLLSNMLCFDPNKRISAR 296
Query: 262 DAMSHIYFSDLNVAI 276
DAM+H YF DL+ I
Sbjct: 297 DAMNHPYFKDLDPQI 311
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 256 bits (654), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 130/273 (47%), Positives = 186/273 (68%), Gaps = 9/273 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNE-GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVF 63
+D N +AIK L E GVP +A+RE+ LLKEL+H+NI+ L V+H +L L+F
Sbjct: 53 AIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112
Query: 64 EHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLIN----- 118
E+ + DLKKY D N ++ + ++KSF+YQL+ G+ FCHSR LHRDLKPQNLL++
Sbjct: 113 EYAENDLKKYMDK-NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDAS 171
Query: 119 KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
+ LK+ DFGLARAFGIP++ ++ E++TLWYRPP++L G++ Y+TS+D+WS CI+AE+
Sbjct: 172 ETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEM 231
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFK-PFPMYHPSMSFSQVAPK 237
PLFPG DQL +IF++LG P + TWPG+ LPD+K FP + +
Sbjct: 232 L-MKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGAL 290
Query: 238 LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
L +G DLL +L +PV+R+SA++A+ H YFS
Sbjct: 291 LDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS 323
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 214 bits (544), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 121/272 (44%), Positives = 162/272 (59%), Gaps = 24/272 (8%)
Query: 22 VGNEGVPSSALREICLLKELK---HKNIVRLYDV-----LHSEKKLTLVFEHCDQDLKKY 73
G EG+P S +RE+ +L+ L+ H N+VRL+DV E KLTLVFEH DQDL Y
Sbjct: 49 TGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTY 108
Query: 74 FDSL-NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
D + + + +K M+QLLRGL F HS V+HRDLKPQN+L+ +G++KLADFGLAR
Sbjct: 109 LDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
Query: 133 AFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVD 192
+ + S VVTLWYR P+VL + Y T +D+WS GCIFAE+ +PLF GS
Sbjct: 169 IYSFQMALTSV-VVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRR-KPLFRGSSDV 225
Query: 193 DQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYH--PSMSFSQVAPKLTAKGRDLLQRLL 250
DQL +I ++G P E+ WP LP +H + + + G+DLL + L
Sbjct: 226 DQLGKILDVIGLPGEEDWPRDVALPR----QAFHSKSAQPIEKFVTDIDELGKDLLLKCL 281
Query: 251 VCNPVQRMSAEDAMSHIYFSDLNVAIKSERCQ 282
NP +R+SA A+SH YF DL ERC+
Sbjct: 282 TFNPAKRISAYSALSHPYFQDL------ERCK 307
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 214 bits (544), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 121/272 (44%), Positives = 162/272 (59%), Gaps = 24/272 (8%)
Query: 22 VGNEGVPSSALREICLLKELK---HKNIVRLYDV-----LHSEKKLTLVFEHCDQDLKKY 73
G EG+P S +RE+ +L+ L+ H N+VRL+DV E KLTLVFEH DQDL Y
Sbjct: 49 TGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTY 108
Query: 74 FDSL-NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
D + + + +K M+QLLRGL F HS V+HRDLKPQN+L+ +G++KLADFGLAR
Sbjct: 109 LDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
Query: 133 AFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVD 192
+ + S VVTLWYR P+VL + Y T +D+WS GCIFAE+ +PLF GS
Sbjct: 169 IYSFQMALTSV-VVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRR-KPLFRGSSDV 225
Query: 193 DQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYH--PSMSFSQVAPKLTAKGRDLLQRLL 250
DQL +I ++G P E+ WP LP +H + + + G+DLL + L
Sbjct: 226 DQLGKILDVIGLPGEEDWPRDVALPR----QAFHSKSAQPIEKFVTDIDELGKDLLLKCL 281
Query: 251 VCNPVQRMSAEDAMSHIYFSDLNVAIKSERCQ 282
NP +R+SA A+SH YF DL ERC+
Sbjct: 282 TFNPAKRISAYSALSHPYFQDL------ERCK 307
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 213 bits (542), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 118/272 (43%), Positives = 160/272 (58%), Gaps = 12/272 (4%)
Query: 7 DRTPNTALAIK----GTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLV 62
D+ N +AIK G +G+ +ALREI LL+EL H NI+ L D + ++LV
Sbjct: 31 DKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLV 90
Query: 63 FEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
F+ + DL+ + + +K++M L+GL + H +LHRDLKP NLL+++NG
Sbjct: 91 FDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGV 150
Query: 123 LKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG 182
LKLADFGLA++FG P + Y +VVT WYR P++LFGA++Y +DMW+ GCI AEL
Sbjct: 151 LKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL-LR 209
Query: 183 RPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPD---FKPFPMYHPSMSFSQVAPKLT 239
P PG DQL RIF+ LGTPTE+ WP M LPD FK FP FS L
Sbjct: 210 VPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLL 269
Query: 240 AKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSD 271
DL+Q L + NP R++A A+ YFS+
Sbjct: 270 ----DLIQGLFLFNPCARITATQALKMKYFSN 297
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/259 (44%), Positives = 156/259 (60%), Gaps = 18/259 (6%)
Query: 23 GNEGVPSSALREICLLKELK---HKNIVRLYDV-----LHSEKKLTLVFEHCDQDLKKYF 74
G EG+P S +RE+ +L+ L+ H N+VRL+DV E KLTLVFEH DQDL Y
Sbjct: 50 GEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYL 109
Query: 75 DSL-NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARA 133
D + + + +K M+QLLRGL F HS V+HRDLKPQN+L+ +G++KLADFGLAR
Sbjct: 110 DKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
Query: 134 FGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDD 193
+ + S VVTLWYR P+VL + Y T +D+WS GCIFAE+ +PLF GS D
Sbjct: 170 YSFQMALTSV-VVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRR-KPLFRGSSDVD 226
Query: 194 QLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYH--PSMSFSQVAPKLTAKGRDLLQRLLV 251
QL +I ++G P E+ WP LP +H + + + G+DLL + L
Sbjct: 227 QLGKILDVIGLPGEEDWPRDVALPR----QAFHSKSAQPIEKFVTDIDELGKDLLLKCLT 282
Query: 252 CNPVQRMSAEDAMSHIYFS 270
NP +R+SA A+SH YF
Sbjct: 283 FNPAKRISAYSALSHPYFQ 301
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 201 bits (511), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 151/256 (58%), Gaps = 14/256 (5%)
Query: 23 GNEGVPSSALREICLLKELK---HKNIVRLYDVLHS-----EKKLTLVFEHCDQDLKKYF 74
G EG+P S +RE+ LL+ L+ H N+VRL DV + E K+TLVFEH DQDL+ Y
Sbjct: 42 GEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL 101
Query: 75 DSLNGE-IDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARA 133
D + + +K M Q LRGL F H+ ++HRDLKP+N+L+ G +KLADFGLAR
Sbjct: 102 DKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
Query: 134 FGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDD 193
+ + + VVTLWYR P+VL + Y T +DMWS GCIFAE+ +PLF G+ D
Sbjct: 162 YSYQMALFPV-VVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRR-KPLFCGNSEAD 218
Query: 194 QLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCN 253
QL +IF L+G P ED WP LP FP P V P++ G LL +L N
Sbjct: 219 QLGKIFDLIGLPPEDDWPRDVSLPR-GAFPPRGPR-PVQSVVPEMEESGAQLLLEMLTFN 276
Query: 254 PVQRMSAEDAMSHIYF 269
P +R+SA A+ H Y
Sbjct: 277 PHKRISAFRALQHSYL 292
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 151/256 (58%), Gaps = 14/256 (5%)
Query: 23 GNEGVPSSALREICLLKELK---HKNIVRLYDVLHS-----EKKLTLVFEHCDQDLKKYF 74
G EG+P S +RE+ LL+ L+ H N+VRL DV + E K+TLVFEH DQDL+ Y
Sbjct: 42 GEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL 101
Query: 75 DSLNGE-IDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARA 133
D + + +K M Q LRGL F H+ ++HRDLKP+N+L+ G +KLADFGLAR
Sbjct: 102 DKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
Query: 134 FGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDD 193
+ + + VVTLWYR P+VL + Y T +DMWS GCIFAE+ +PLF G+ D
Sbjct: 162 YSYQM-ALAPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRR-KPLFCGNSEAD 218
Query: 194 QLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCN 253
QL +IF L+G P ED WP LP FP P V P++ G LL +L N
Sbjct: 219 QLGKIFDLIGLPPEDDWPRDVSLPR-GAFPPRGPR-PVQSVVPEMEESGAQLLLEMLTFN 276
Query: 254 PVQRMSAEDAMSHIYF 269
P +R+SA A+ H Y
Sbjct: 277 PHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 150/256 (58%), Gaps = 14/256 (5%)
Query: 23 GNEGVPSSALREICLLKELK---HKNIVRLYDVLHS-----EKKLTLVFEHCDQDLKKYF 74
G EG+P S +RE+ LL+ L+ H N+VRL DV + E K+TLVFEH DQDL+ Y
Sbjct: 42 GEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYL 101
Query: 75 DSLNGE-IDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARA 133
D + + +K M Q LRGL F H+ ++HRDLKP+N+L+ G +KLADFGLAR
Sbjct: 102 DKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
Query: 134 FGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDD 193
+ + VVTLWYR P+VL + Y T +DMWS GCIFAE+ +PLF G+ D
Sbjct: 162 YSYQM-ALDPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRR-KPLFCGNSEAD 218
Query: 194 QLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCN 253
QL +IF L+G P ED WP LP FP P V P++ G LL +L N
Sbjct: 219 QLGKIFDLIGLPPEDDWPRDVSLPR-GAFPPRGPR-PVQSVVPEMEESGAQLLLEMLTFN 276
Query: 254 PVQRMSAEDAMSHIYF 269
P +R+SA A+ H Y
Sbjct: 277 PHKRISAFRALQHSYL 292
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 148/252 (58%), Gaps = 14/252 (5%)
Query: 27 VPSSALREICLLKELK---HKNIVRLYDVLHS-----EKKLTLVFEHCDQDLKKYFDSLN 78
+P S +RE+ LL+ L+ H N+VRL DV + E K+TLVFEH DQDL+ Y D
Sbjct: 54 LPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAP 113
Query: 79 GE-IDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
+ + +K M Q LRGL F H+ ++HRDLKP+N+L+ G +KLADFGLAR +
Sbjct: 114 PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ 173
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ + VVTLWYR P+VL + Y T +DMWS GCIFAE+ +PLF G+ DQL +
Sbjct: 174 M-ALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGK 230
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQR 257
IF L+G P ED WP LP FP P V P++ G LL +L NP +R
Sbjct: 231 IFDLIGLPPEDDWPRDVSLPR-GAFPPRGPR-PVQSVVPEMEESGAQLLLEMLTFNPHKR 288
Query: 258 MSAEDAMSHIYF 269
+SA A+ H Y
Sbjct: 289 ISAFRALQHSYL 300
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 174 bits (441), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 162/284 (57%), Gaps = 21/284 (7%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M +S D T +AIK ++ LREI +L +H+N++ + D+L +
Sbjct: 58 MVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEA 117
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
+ + +V + + DL K S ++ D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 118 MRDVYIVQDLMETDLYKLLKS--QQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 175
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
LIN +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 176 LINTTCDLKICDFGLAR-IADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSV 234
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKP--FPMYHPS- 228
GCI AE+ + RP+FPG DQL I +LG+P+++ +N + + K + PS
Sbjct: 235 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQE---DLNCIINMKARNYLQSLPSK 290
Query: 229 --MSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++++ PK +K DLL R+L NP +R++ E+A++H Y
Sbjct: 291 TKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLE 334
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 147/262 (56%), Gaps = 20/262 (7%)
Query: 25 EGVPSSALREICLLKELKHKNIVRLYDVLHSEKK--------LTLVFEHCDQDLKKYFDS 76
EG P +ALREI +L+ LKH+N+V L ++ ++ + LVF+ C+ DL +
Sbjct: 58 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 117
Query: 77 LNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGI 136
+ + L +K M LL GL + H +LHRD+K N+LI ++G LKLADFGLARAF +
Sbjct: 118 VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 177
Query: 137 PVKC----YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVD 192
Y VVTLWYRPP++L G + Y ID+W AGCI AE+ P+ G+
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQ 236
Query: 193 DQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGR-----DLLQ 247
QL I +L G+ T + WP ++ ++ + +V +L A R DL+
Sbjct: 237 HQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQK--RKVKDRLKAYVRDPYALDLID 294
Query: 248 RLLVCNPVQRMSAEDAMSHIYF 269
+LLV +P QR+ ++DA++H +F
Sbjct: 295 KLLVLDPAQRIDSDDALNHDFF 316
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 171 bits (434), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 147/262 (56%), Gaps = 20/262 (7%)
Query: 25 EGVPSSALREICLLKELKHKNIVRLYDVLHSEKK--------LTLVFEHCDQDLKKYFDS 76
EG P +ALREI +L+ LKH+N+V L ++ ++ + LVF+ C+ DL +
Sbjct: 58 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSN 117
Query: 77 LNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGI 136
+ + L +K M LL GL + H +LHRD+K N+LI ++G LKLADFGLARAF +
Sbjct: 118 VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 177
Query: 137 PVKC----YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVD 192
Y VVTLWYRPP++L G + Y ID+W AGCI AE+ P+ G+
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQ 236
Query: 193 DQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGR-----DLLQ 247
QL I +L G+ T + WP ++ ++ + +V +L A R DL+
Sbjct: 237 HQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQK--RKVKDRLKAYVRDPYALDLID 294
Query: 248 RLLVCNPVQRMSAEDAMSHIYF 269
+LLV +P QR+ ++DA++H +F
Sbjct: 295 KLLVLDPAQRIDSDDALNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 171 bits (434), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 147/262 (56%), Gaps = 20/262 (7%)
Query: 25 EGVPSSALREICLLKELKHKNIVRLYDVLHSEKK--------LTLVFEHCDQDLKKYFDS 76
EG P +ALREI +L+ LKH+N+V L ++ ++ + LVF+ C+ DL +
Sbjct: 57 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 116
Query: 77 LNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGI 136
+ + L +K M LL GL + H +LHRD+K N+LI ++G LKLADFGLARAF +
Sbjct: 117 VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 176
Query: 137 PVKC----YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVD 192
Y VVTLWYRPP++L G + Y ID+W AGCI AE+ P+ G+
Sbjct: 177 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQ 235
Query: 193 DQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGR-----DLLQ 247
QL I +L G+ T + WP ++ ++ + +V +L A R DL+
Sbjct: 236 HQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQK--RKVKDRLKAYVRDPYALDLID 293
Query: 248 RLLVCNPVQRMSAEDAMSHIYF 269
+LLV +P QR+ ++DA++H +F
Sbjct: 294 KLLVLDPAQRIDSDDALNHDFF 315
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 171 bits (434), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 147/262 (56%), Gaps = 20/262 (7%)
Query: 25 EGVPSSALREICLLKELKHKNIVRLYDVLHSEKK--------LTLVFEHCDQDLKKYFDS 76
EG P +ALREI +L+ LKH+N+V L ++ ++ + LVF+ C+ DL +
Sbjct: 58 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 117
Query: 77 LNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGI 136
+ + L +K M LL GL + H +LHRD+K N+LI ++G LKLADFGLARAF +
Sbjct: 118 VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 177
Query: 137 PVKC----YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVD 192
Y VVTLWYRPP++L G + Y ID+W AGCI AE+ P+ G+
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS-PIMQGNTEQ 236
Query: 193 DQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGR-----DLLQ 247
QL I +L G+ T + WP ++ ++ + +V +L A R DL+
Sbjct: 237 HQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQK--RKVKDRLKAYVRDPYALDLID 294
Query: 248 RLLVCNPVQRMSAEDAMSHIYF 269
+LLV +P QR+ ++DA++H +F
Sbjct: 295 KLLVLDPAQRIDSDDALNHDFF 316
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 139/253 (54%), Gaps = 21/253 (8%)
Query: 31 ALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFM 90
ALREI +LK+LKH N+V L +V +++L LVFE+CD + D + +VKS
Sbjct: 49 ALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSIT 108
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWY 150
+Q L+ + FCH N +HRD+KP+N+LI K+ +KL DFG AR P Y EV T WY
Sbjct: 109 WQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWY 168
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT------ 204
R P++L G Y +D+W+ GC+FAEL +G PL+PG DQL I K LG
Sbjct: 169 RSPELLVGDTQYGPPVDVWAIGCVFAELL-SGVPLWPGKSDVDQLYLIRKTLGDLIPRHQ 227
Query: 205 ---PTEDTWPGMNL--LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
T + G+ + D +P + P++S+ + LL+ L +P +R++
Sbjct: 228 QVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALG---------LLKGCLHMDPTERLT 278
Query: 260 AEDAMSHIYFSDL 272
E + H YF ++
Sbjct: 279 CEQLLHHPYFENI 291
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 167 bits (424), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 155/281 (55%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 40 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQ 99
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 100 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 157
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 158 LLNTTSDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 216
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED G+NL + H + +
Sbjct: 217 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKV 275
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y +
Sbjct: 276 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLA 316
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 134/246 (54%), Gaps = 3/246 (1%)
Query: 27 VPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIV 86
V A+REI LLK+L+H+N+V L +V +K+ LVFE D + + +D +V
Sbjct: 67 VKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVV 126
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +++Q++ G+ FCHS N++HRD+KP+N+L++++G +KL DFG AR P + Y EV
Sbjct: 127 QKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA 186
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P++L G Y ++D+W+ GC+ E+ G PLFPG DQL I LG
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMF-MGEPLFPGDSDIDQLYHIMMCLGNLI 245
Query: 207 EDTWPGMNLLPDFKP--FPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
N P F P + PKL+ DL ++ L +P +R + +
Sbjct: 246 PRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305
Query: 265 SHIYFS 270
H +F
Sbjct: 306 HHDFFQ 311
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 38 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 97
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 98 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 155
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 156 LLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 215 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKV 273
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 274 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 158/285 (55%), Gaps = 40/285 (14%)
Query: 22 VGNEGVPSSALREICLLKELKHKNIVRLYDVL--HSEKKLTLVFEHCDQDLK---KYFDS 76
+ G+ SA REI LL+ELKH N++ L V H+++K+ L+F++ + DL K+ +
Sbjct: 56 IEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRA 115
Query: 77 LNG-----EIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLI----NKNGELKLAD 127
++ +VKS +YQ+L G+ + H+ VLHRDLKP N+L+ + G +K+AD
Sbjct: 116 SKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIAD 175
Query: 128 FGLARAFGIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRP 184
G AR F P+K + VVT WYR P++L GA+ YT +ID+W+ GCIFAEL + P
Sbjct: 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EP 234
Query: 185 LFPGSDVD---------DQLKRIFKLLGTPTEDTWPGMNLLP-------DFKPFPMYHPS 228
+F D DQL RIF ++G P + W + +P DF+ + S
Sbjct: 235 IFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCS 294
Query: 229 ----MSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
M +V P +K LLQ+LL +P++R+++E AM YF
Sbjct: 295 LIKYMEKHKVKP--DSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 337
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 38 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 97
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 98 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 155
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 156 LLNTTXDLKIXDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 215 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKV 273
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 274 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 164 bits (414), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 38 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 97
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 98 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 155
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 156 LLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 215 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 273
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 274 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 164 bits (414), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 42 MVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 102 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 159
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 160 LLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 219 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 278 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 154/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 40 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQ 99
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 100 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 157
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 158 LLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 216
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 217 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 275
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y +
Sbjct: 276 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLA 316
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 38 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 97
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 98 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 155
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 156 LLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 215 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 273
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 274 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 40 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 99
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 100 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 157
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 158 LLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 216
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 217 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 275
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 276 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 316
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 58 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 117
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 118 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 175
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 176 LLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 234
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 235 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 293
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 294 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 42 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 102 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 159
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 160 LLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 219 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 278 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 42 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 102 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 159
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 160 LLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 219 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 278 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 43 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 102
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 103 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 160
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 161 LLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSV 219
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 220 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 278
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 279 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 46 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 105
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 106 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 163
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 164 LLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 222
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 223 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 281
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 282 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 322
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 38 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 97
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 98 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 155
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 156 LLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 214
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 215 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 273
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 274 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 36 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 95
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 96 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 153
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 154 LLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 212
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 213 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 271
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 272 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 151/281 (53%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 58 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 117
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + LV DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 118 MKDVYLVTHLMGADLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 175
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 176 LLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 234
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 235 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 293
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 294 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 142/259 (54%), Gaps = 23/259 (8%)
Query: 31 ALREICLLKELKHKNIVRLYDVLHSE-----KKLTLVFEHCDQDLKKYFDSLNGEIDLDI 85
LREI +LK KH+NI+ ++++ + ++ ++ E DL + + + D
Sbjct: 56 TLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDH 113
Query: 86 VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-------GIPV 138
++ F+YQ LR + H NV+HRDLKP NLLIN N +LK+ DFGLAR P
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 139 KCYSA---EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQL 195
S V T WYR P+V+ + Y+ ++D+WS GCI AEL RP+FPG D QL
Sbjct: 174 GQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPIFPGRDYRHQL 232
Query: 196 KRIFKLLGTPTEDTWPGMNLLPD----FKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLV 251
IF ++GTP D P K PMY P+ ++ P++ KG DLLQR+LV
Sbjct: 233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMY-PAAPLEKMFPRVNPKGIDLLQRMLV 291
Query: 252 CNPVQRMSAEDAMSHIYFS 270
+P +R++A++A+ H Y
Sbjct: 292 FDPAKRITAKEALEHPYLQ 310
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 43 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 102
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 103 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 160
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 161 LLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 219
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 220 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 278
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 279 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 44 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 103
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 104 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 161
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 162 LLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 220
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 221 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 279
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 280 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 320
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 35 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 94
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 95 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 152
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 153 LLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 211
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 212 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 270
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 271 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 311
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 42 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 102 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 159
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 160 LLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 219 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 278 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 141/259 (54%), Gaps = 23/259 (8%)
Query: 31 ALREICLLKELKHKNIVRLYDVLHSE-----KKLTLVFEHCDQDLKKYFDSLNGEIDLDI 85
LREI +LK KH+NI+ ++++ + ++ ++ E DL + + + D
Sbjct: 56 TLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDH 113
Query: 86 VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE- 144
++ F+YQ LR + H NV+HRDLKP NLLIN N +LK+ DFGLAR S
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 145 ---------VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQL 195
V T WYR P+V+ + Y+ ++D+WS GCI AEL RP+FPG D QL
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPIFPGRDYRHQL 232
Query: 196 KRIFKLLGTPTEDTWPGMNLLPD----FKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLV 251
IF ++GTP D P K PMY P+ ++ P++ KG DLLQR+LV
Sbjct: 233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMY-PAAPLEKMFPRVNPKGIDLLQRMLV 291
Query: 252 CNPVQRMSAEDAMSHIYFS 270
+P +R++A++A+ H Y
Sbjct: 292 FDPAKRITAKEALEHPYLQ 310
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 141/259 (54%), Gaps = 23/259 (8%)
Query: 31 ALREICLLKELKHKNIVRLYDVLHSE-----KKLTLVFEHCDQDLKKYFDSLNGEIDLDI 85
LREI +LK KH+NI+ ++++ + ++ ++ E DL + + + D
Sbjct: 56 TLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDH 113
Query: 86 VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE- 144
++ F+YQ LR + H NV+HRDLKP NLLIN N +LK+ DFGLAR S
Sbjct: 114 IQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 145 ---------VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQL 195
V T WYR P+V+ + Y+ ++D+WS GCI AEL RP+FPG D QL
Sbjct: 174 GQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPIFPGRDYRHQL 232
Query: 196 KRIFKLLGTPTEDTWPGMNLLPD----FKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLV 251
IF ++GTP D P K PMY P+ ++ P++ KG DLLQR+LV
Sbjct: 233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMY-PAAPLEKMFPRVNPKGIDLLQRMLV 291
Query: 252 CNPVQRMSAEDAMSHIYFS 270
+P +R++A++A+ H Y
Sbjct: 292 FDPAKRITAKEALEHPYLQ 310
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 162 bits (409), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 152/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 36 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 95
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 96 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 153
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 154 LLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 212
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP-TEDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P ED +NL + H + +
Sbjct: 213 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKV 271
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 272 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 138/250 (55%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDV------LHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK LKH+N++ L DV + ++ LV DL S + + V
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS--QALSDEHV 133
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQLLRGL + HS ++HRDLKP N+ +N++ EL++ DFGLAR + Y V
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY---VA 190
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL G+ LFPGSD DQLKRI +++GTP+
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ-GKALFPGSDYIDQLKRIMEVVGTPS 249
Query: 207 EDTWPGMN------LLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ ++ + P P S F P DLL R+LV + QR+SA
Sbjct: 250 PEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAI----DLLGRMLVLDSDQRVSA 305
Query: 261 EDAMSHIYFS 270
+A++H YFS
Sbjct: 306 AEALAHAYFS 315
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 152/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AIK ++ LREI +L +H+NI+ + D++ +
Sbjct: 42 MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 102 MKDVYIVQDLMETDLYKLLKC--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 159
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 160 LLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 219 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 278 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 161 bits (408), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 153/281 (54%), Gaps = 15/281 (5%)
Query: 1 MFTSGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSE---- 56
M S D +AI+ ++ LREI +L +H+NI+ + D++ +
Sbjct: 42 MVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101
Query: 57 -KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
K + +V + + DL K + + D + F+YQ+LRGL + HS NVLHRDLKP NL
Sbjct: 102 MKDVYIVQDLMETDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL 159
Query: 116 LINKNGELKLADFGLARAFGIPVKCYSA----EVVTLWYRPPDVLFGAKLYTTSIDMWSA 171
L+N +LK+ DFGLAR P ++ V T WYR P+++ +K YT SID+WS
Sbjct: 160 LLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
Query: 172 GCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT-EDTWPGMNLLPDFKPFPMYHPS-M 229
GCI AE+ + RP+FPG DQL I +LG+P+ ED +NL + H + +
Sbjct: 219 GCILAEML-SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 277
Query: 230 SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++++ P +K DLL ++L NP +R+ E A++H Y
Sbjct: 278 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 161/287 (56%), Gaps = 25/287 (8%)
Query: 4 SGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLH-SEKKLT-- 60
S VD + +AIK L + V ALREI +++ L H NIV+++++L S +LT
Sbjct: 29 SAVDNDCDKRVAIKKIVLTDPQSV-KHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87
Query: 61 -----------LVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRD 109
+V E+ + DL + G + + + FMYQLLRGL + HS NVLHRD
Sbjct: 88 VGSLTELNSVYIVQEYMETDLANVLE--QGPLLEEHARLFMYQLLRGLKYIHSANVLHRD 145
Query: 110 LKPQNLLIN-KNGELKLADFGLARAFGIPVKCY----SAEVVTLWYRPPDVLFGAKLYTT 164
LKP NL IN ++ LK+ DFGLAR P + S +VT WYR P +L YT
Sbjct: 146 LKPANLFINTEDLVLKIGDFGLARIMD-PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTK 204
Query: 165 SIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG-TPTEDTWPGMNLLPDFKPFP 223
+IDMW+AGCIFAE+ G+ LF G+ +Q++ I + + ED ++++P +
Sbjct: 205 AIDMWAAGCIFAEML-TGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRND 263
Query: 224 MYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
M P +Q+ P ++ + D L+++L +P+ R++AE+A+SH Y S
Sbjct: 264 MTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 151/256 (58%), Gaps = 18/256 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ +++ +KH N+V L +S +KK L LV E+ + + +++ L + +
Sbjct: 81 RELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPM 140
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYS 142
++K +MYQLLR LA+ HS + HRD+KPQNLL++ +G LKL DFG A+ I +
Sbjct: 141 LLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-IAGEPNV 199
Query: 143 AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ + + +YR P+++FGA YTT+ID+WS GC+ AEL G+PLFPG DQL I K+L
Sbjct: 200 SXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQ-GQPLFPGESGIDQLVEIIKVL 258
Query: 203 GTPTEDTWPGMNLLPDF--KPFPMYHPSMSFSQV-APKLTAKGRDLLQRLLVCNPVQRMS 259
GTP+ + MN P++ FP P FS+V P+ DL+ RLL P R++
Sbjct: 259 GTPSREQIKTMN--PNYMEHKFPQIRPH-PFSKVFRPRTPPDAIDLISRLLEYTPSARLT 315
Query: 260 AEDAMSHIYFSDLNVA 275
A +A+ H +F +L
Sbjct: 316 AIEALCHPFFDELRTG 331
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVL--------HSEKKLTLVFEHCDQDLKKYFDSLNGEIDLD 84
RE+ LLK LKH+N++ L DV SE L D + +L+ E
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH--- 132
Query: 85 IVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE 144
V+ +YQLLRGL + HS ++HRDLKP N+ +N++ EL++ DFGLAR + Y
Sbjct: 133 -VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY--- 188
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
V T WYR P+++ Y ++D+WS GCI AEL G+ LFPGSD DQLKRI +++GT
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ-GKALFPGSDYIDQLKRIMEVVGT 247
Query: 205 PTEDTWPGMN------LLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
P+ + ++ + P P S F P DLL R+LV + QR+
Sbjct: 248 PSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAI----DLLGRMLVLDSDQRV 303
Query: 259 SAEDAMSHIYFS 270
SA +A++H YFS
Sbjct: 304 SAAEALAHAYFS 315
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 138/250 (55%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ A Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 244 AELLKKISSESARNYIQSLTQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 300 AQALAHAYFA 309
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVL--------HSEKKLTLVFEHCDQDLKKYFDSLNGEIDLD 84
RE+ LLK LKH+N++ L DV SE L D + +L+ E
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH--- 124
Query: 85 IVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE 144
V+ +YQLLRGL + HS ++HRDLKP N+ +N++ EL++ DFGLAR + Y
Sbjct: 125 -VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGY--- 180
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
V T WYR P+++ Y ++D+WS GCI AEL G+ LFPGSD DQLKRI +++GT
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQ-GKALFPGSDYIDQLKRIMEVVGT 239
Query: 205 PTEDTWPGMN------LLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
P+ + ++ + P P S F P DLL R+LV + QR+
Sbjct: 240 PSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAI----DLLGRMLVLDSDQRV 295
Query: 259 SAEDAMSHIYFS 270
SA +A++H YFS
Sbjct: 296 SAAEALAHAYFS 307
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 133
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY---VA 190
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 250 AELLKKISSESARNYIQSLTQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 305
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 306 AQALAHAYFA 315
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL S ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKS--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGL R + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 157 bits (397), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 129
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY---VA 186
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 243
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 244 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 299
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 300 TAAQALAHAYFA 311
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 157 bits (397), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 134
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VA 191
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLILRLVGT-- 248
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 249 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 304
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 305 TAAQALAHAYFA 316
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 157 bits (396), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 138
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VA 195
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 252
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 253 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 308
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 309 TAAQALAHAYFA 320
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 156 bits (395), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 134
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VA 191
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLILRLVGT-- 248
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 249 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 304
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 305 TAAQALAHAYFA 316
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 148/277 (53%), Gaps = 18/277 (6%)
Query: 4 SGVDRTPNTALAIKG-THLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT-- 60
S +D+ +AIK + +E A RE+ LLK ++H+N++ L DV L
Sbjct: 60 SAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119
Query: 61 ----LVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLL 116
LV DL+K + E + ++ +YQ+L+GL + HS V+HRDLKP NL
Sbjct: 120 YDFYLVMPFMQTDLQKI---MGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLA 176
Query: 117 INKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFA 176
+N++ ELK+ DFGLAR + Y VVT WYR P+V+ Y ++D+WS GCI A
Sbjct: 177 VNEDCELKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMA 233
Query: 177 ELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN---LLPDFKPFPMYHPSMSFSQ 233
E+ G+ LF G D DQL +I K+ G P + +N + P P F+Q
Sbjct: 234 EMLT-GKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQ-TPRKDFTQ 291
Query: 234 VAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
+ P+ + + DLL+++L + +R++A A++H +F
Sbjct: 292 LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 132
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VA 189
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 246
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 247 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 302
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 303 TAAQALAHAYFA 314
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 134
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VA 191
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLILRLVGT-- 248
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 249 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 304
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 305 TAAQALAHAYFA 316
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 132
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VA 189
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 246
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 247 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 302
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 303 TAAQALAHAYFA 314
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--AKLTDDHV 123
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 180
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 240 AELLKKISSESARNYIQSLAQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 296 AQALAHAYFA 305
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 139
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 196
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 253
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 254 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 309
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 310 TAAQALAHAYFA 321
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 139
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 196
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 253
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 254 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 309
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 310 TAAQALAHAYFA 321
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 139
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 196
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 253
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 254 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 309
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 310 TAAQALAHAYFA 321
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 150
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGY---VA 207
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 264
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 265 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 320
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 321 TAAQALAHAYFA 332
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 129
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 186
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 243
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 244 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 299
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 300 TAAQALAHAYFA 311
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 150
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 207
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 266
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 267 AELLKKISSESARNYIQSLTQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 322
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 323 AQALAHAYFA 332
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 129
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 186
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 243
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 244 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 299
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 300 TAAQALAHAYFA 311
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 133
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 190
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 250 AELLKKISSESARNYIQSLTQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 305
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 306 AQALAHAYFA 315
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 147
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 204
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 264 AELLKKISSESARNYIQSLAQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 319
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 320 AQALAHAYFA 329
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 80 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 137
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 138 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 194
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 195 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 251
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 252 ----PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 307
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 308 TAAQALAHAYFA 319
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 124
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 181
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 241 AELLKKISSESARNYIQSLTQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 296
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 297 AQALAHAYFA 306
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 132
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 189
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 249 AELLKKISSESARNYIQSLTQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 304
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 305 AQALAHAYFA 314
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 134
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 191
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 248
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 249 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 304
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 305 TAAQALAHAYFA 316
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 146
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 203
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 262
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 263 AELLKKISSESARNYIQSLAQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 318
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 319 AQALAHAYFA 328
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 138
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 195
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 252
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 253 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 308
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 309 TAAQALAHAYFA 320
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 132
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 189
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 246
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 247 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 302
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 303 TAAQALAHAYFA 314
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 126
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 127 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 183
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 240
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 241 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 296
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 297 TAAQALAHAYFA 308
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 133
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 190
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 250 AELLKKISSESARNYIQSLAQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 305
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 306 AQALAHAYFA 315
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 146
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 203
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 262
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 263 AELLKKISSESARNYIQSLTQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 318
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 319 AQALAHAYFA 328
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 147
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 204
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 264 AELLKKISSESARNYIQSLTQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 319
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 320 AQALAHAYFA 329
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 125
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 126 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 182
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 239
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 240 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 295
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 296 TAAQALAHAYFA 307
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 133
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 190
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 250 AELLKKISSESARNYIQSLTQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 305
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 306 AQALAHAYFA 315
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 137/258 (53%), Gaps = 28/258 (10%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSE------KKLTLVFEHCDQDLKKYFDSLNGEIDLDI 85
LRE+ +LK KH NI+ + D+L K + +V + + DL + S + + L+
Sbjct: 101 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPLTLEH 159
Query: 86 VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY---- 141
V+ F+YQLLRGL + HS V+HRDLKP NLL+N+N ELK+ DFG+AR +
Sbjct: 160 VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM 219
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ V T WYR P+++ YT +ID+WS GCIF E+ A R LFPG + QL+ I +
Sbjct: 220 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML-ARRQLFPGKNYVHQLQLIMMV 278
Query: 202 LGTPT---------EDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVC 252
LGTP+ E + LP +P P + V P + LL R+L
Sbjct: 279 LGTPSPAVIQAVGAERVRAYIQSLPPRQPVP-------WETVYPGADRQALSLLGRMLRF 331
Query: 253 NPVQRMSAEDAMSHIYFS 270
P R+SA A+ H + +
Sbjct: 332 EPSARISAAAALRHPFLA 349
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 129
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 186
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 243
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 244 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 299
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 300 TAAQALAHAYFA 311
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 124
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 181
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 238
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 239 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 294
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 295 TAAQALAHAYFA 306
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 123
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 180
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 240 AELLKKISSESARNYIQSLTQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 296 AQALAHAYFA 305
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 123
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 180
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 240 AELLKKISSESARNYIQSLAQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 296 AQALAHAYFA 305
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 137/258 (53%), Gaps = 28/258 (10%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSE------KKLTLVFEHCDQDLKKYFDSLNGEIDLDI 85
LRE+ +LK KH NI+ + D+L K + +V + + DL + S + + L+
Sbjct: 102 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPLTLEH 160
Query: 86 VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY---- 141
V+ F+YQLLRGL + HS V+HRDLKP NLL+N+N ELK+ DFG+AR +
Sbjct: 161 VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM 220
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ V T WYR P+++ YT +ID+WS GCIF E+ A R LFPG + QL+ I +
Sbjct: 221 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML-ARRQLFPGKNYVHQLQLIMMV 279
Query: 202 LGTPT---------EDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVC 252
LGTP+ E + LP +P P + V P + LL R+L
Sbjct: 280 LGTPSPAVIQAVGAERVRAYIQSLPPRQPVP-------WETVYPGADRQALSLLGRMLRF 332
Query: 253 NPVQRMSAEDAMSHIYFS 270
P R+SA A+ H + +
Sbjct: 333 EPSARISAAAALRHPFLA 350
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 148/277 (53%), Gaps = 18/277 (6%)
Query: 4 SGVDRTPNTALAIKG-THLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT-- 60
S +D+ +AIK + +E A RE+ LLK ++H+N++ L DV L
Sbjct: 42 SAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101
Query: 61 ----LVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLL 116
LV DL+K + + + ++ +YQ+L+GL + HS V+HRDLKP NL
Sbjct: 102 YDFYLVMPFMQTDLQKI---MGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLA 158
Query: 117 INKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFA 176
+N++ ELK+ DFGLAR + Y VVT WYR P+V+ Y ++D+WS GCI A
Sbjct: 159 VNEDCELKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMA 215
Query: 177 ELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN---LLPDFKPFPMYHPSMSFSQ 233
E+ G+ LF G D DQL +I K+ G P + +N + P P F+Q
Sbjct: 216 EMLT-GKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQ-TPRKDFTQ 273
Query: 234 VAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
+ P+ + + DLL+++L + +R++A A++H +F
Sbjct: 274 LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ D+GLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 153/286 (53%), Gaps = 29/286 (10%)
Query: 4 SGVDRTPNTALAIKGTHL-VGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT-- 60
S VD +AIK + +E A RE+ LLK ++H+N++ L DV ++ L
Sbjct: 43 SAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102
Query: 61 ----LVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLL 116
LV DL K + ++ D ++ +YQ+L+GL + H+ ++HRDLKP NL
Sbjct: 103 TDFYLVMPFMGTDLGKLMK--HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLA 160
Query: 117 INKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFA 176
+N++ ELK+ DFGLAR + VVT WYR P+V+ YT ++D+WS GCI A
Sbjct: 161 VNEDCELKILDFGLARQADSEM---XGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMA 217
Query: 177 ELANAGRPLFPGSDVDDQLKRIFKLLGTP---------TEDTWPGMNLLPDFKPFPMYHP 227
E+ G+ LF GSD DQLK I K+ GTP +++ M LP+ +
Sbjct: 218 EMIT-GKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELE------- 269
Query: 228 SMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDLN 273
F+ + + +LL+++LV + QR++A +A++H YF L+
Sbjct: 270 KKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 154 bits (389), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGXVA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 154 bits (389), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 154 bits (389), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 137/252 (54%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + + V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 154 bits (389), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 158/329 (48%), Gaps = 66/329 (20%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVP-SSALREICLLKELKHKNIVRLYDVLHSEK-----K 58
D+ +AIK + + + + LREI +L LK I+RLYD++ + +
Sbjct: 45 AYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104
Query: 59 LTLVFEHCDQDLKKYFDS---LNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
L +V E D DLKK F + L E +K+ +Y LL G F H ++HRDLKP N
Sbjct: 105 LYIVLEIADSDLKKLFKTPIFLTEEH----IKTILYNLLLGENFIHESGIIHRDLKPANC 160
Query: 116 LINKNGELKLADFGLARAFGIP----------------------VKCYSAEVVTLWYRPP 153
L+N++ +K+ DFGLAR K ++ VVT WYR P
Sbjct: 161 LLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAP 220
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGR----------PLFPGSDV------------ 191
+++ + YT SID+WS GCIFAEL N + PLFPGS
Sbjct: 221 ELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKV 280
Query: 192 -----DDQLKRIFKLLGTPTEDTWPGMN---LLPDFKPFPMYHPSMSFSQVAPKLTAKGR 243
DQL IF ++GTPTED +N ++ K FP P ++ Q P ++ G
Sbjct: 281 HEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKP-INLKQKYPSISDDGI 339
Query: 244 DLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
+LL+ +L NP +R++ + A+ H Y D+
Sbjct: 340 NLLESMLKFNPNKRITIDQALDHPYLKDV 368
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 137/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 123
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + + V
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF---VA 180
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 240 AELLKKISSESARNYIQSLAQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 295
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 296 AQALAHAYFA 305
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 153 bits (387), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 136/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 147
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + V
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---XGXVA 204
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 264 AELLKKISSESARNYIQSLAQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 319
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 320 AQALAHAYFA 329
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 136/252 (53%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ FGLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 136/252 (53%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ D GLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 137/253 (54%), Gaps = 28/253 (11%)
Query: 33 REICLLKELKHKNIVRLYDV------LHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV L + LV DL ++ D V
Sbjct: 99 RELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 156
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DFGLAR + Y V
Sbjct: 157 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VA 213
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D +QL++I +L GTP
Sbjct: 214 TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELL-TGRTLFPGTDHINQLQQIMRLTGTPP 272
Query: 207 EDTWPGM---------NLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQR 257
M N LP P +F+ V DLL+++LV + +R
Sbjct: 273 ASVISRMPSHEARNYINSLPQM-------PKRNFADVFIGANPLAVDLLEKMLVLDTDKR 325
Query: 258 MSAEDAMSHIYFS 270
++A +A++H YFS
Sbjct: 326 ITASEALAHPYFS 338
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 136/252 (53%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ D GLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 136/252 (53%), Gaps = 26/252 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ D GLAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GT
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGT-- 241
Query: 207 EDTWPGMNLLPDFKPFPMYH--------PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
PG LL + P M+F+ V DLL+++LV + +R+
Sbjct: 242 ----PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 297
Query: 259 SAEDAMSHIYFS 270
+A A++H YF+
Sbjct: 298 TAAQALAHAYFA 309
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 136/250 (54%), Gaps = 22/250 (8%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSLNGEIDLDIV 86
RE+ LLK +KH+N++ L DV + L LV DL ++ D V
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHV 127
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
+ +YQ+LRGL + HS +++HRDLKP NL +N++ ELK+ DF LAR + Y V
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY---VA 184
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
T WYR P+++ Y ++D+WS GCI AEL GR LFPG+D DQLK I +L+GTP
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 207 ED------TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA 260
+ + N + P M+F+ V DLL+++LV + +R++A
Sbjct: 244 AELLKKISSESARNYIQSLTQM----PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 299
Query: 261 EDAMSHIYFS 270
A++H YF+
Sbjct: 300 AQALAHAYFA 309
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 90 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 149
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 150 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 209
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
Y + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 210 Y---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 265
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 266 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 324
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 325 PLEACAHSFFDELRDPNVKLPNGR 348
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 96 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 155
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
Y + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 216 Y---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 271
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 272 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 330
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 331 PLEACAHSFFDELRDPNVKLPNGR 354
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 149/267 (55%), Gaps = 27/267 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 67 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 126
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 127 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 186
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
Y + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 187 Y---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 242
Query: 201 LLGTPTEDTWPGMNLLPDFKPFPM----YHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+LGTPT + MN P++ F HP + P+ + L RLL P
Sbjct: 243 VLGTPTREQIREMN--PNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTA 298
Query: 257 RMSAEDAMSHIYFSDL---NVAIKSER 280
R++ +A +H +F +L NV + + R
Sbjct: 299 RLTPLEACAHSFFDELRDPNVKLPNGR 325
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 141 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 200
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 201 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 260
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
Y + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 261 Y---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 316
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 317 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 375
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 376 PLEACAHSFFDELRDPNVKLPNGR 399
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 100 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 159
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 160 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 219
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
Y + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 220 Y---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 275
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 276 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 334
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 335 PLEACAHSFFDELRDPNVKLPNGR 358
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 149/267 (55%), Gaps = 27/267 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
Y + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 182 Y---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 237
Query: 201 LLGTPTEDTWPGMNLLPDFKPFPM----YHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+LGTPT + MN P++ F HP + P+ + L RLL P
Sbjct: 238 VLGTPTREQIREMN--PNYTEFAFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTA 293
Query: 257 RMSAEDAMSHIYFSDL---NVAIKSER 280
R++ +A +H +F +L NV + + R
Sbjct: 294 RLTPLEACAHSFFDELRDPNVKLPNGR 320
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 150 bits (379), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 98 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 157
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 158 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 217
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
Y + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 218 Y---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 273
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 274 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 332
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 333 PLEACAHSFFDELRDPNVKLPNGR 356
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
Y + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 182 Y---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 237
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 238 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 297 PLEACAHSFFDELRDPNVKLPNGR 320
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
Y + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 182 Y---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 237
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 238 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 297 PLEACAHSFFDELRDPNVKLPNGR 320
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 75 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 134
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 135 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 194
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
Y + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 195 Y---ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 250
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 251 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 309
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 310 PLEACAHSFFDELRDPNVKLPNGR 333
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 142/253 (56%), Gaps = 18/253 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 96 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 155
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 156 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--- 212
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+ + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 271
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 272 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 330
Query: 260 AEDAMSHIYFSDL 272
+A +H +F +L
Sbjct: 331 PLEACAHSFFDEL 343
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 142/253 (56%), Gaps = 18/253 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 74 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 133
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 134 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--- 190
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+ + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 249
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 250 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 308
Query: 260 AEDAMSHIYFSDL 272
+A +H +F +L
Sbjct: 309 PLEACAHSFFDEL 321
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 70 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 129
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 130 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--- 186
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+ + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 187 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 245
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 246 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 304
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 305 PLEACAHSFFDELRDPNVKLPNGR 328
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--- 178
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+ + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 237
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 238 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 297 PLEACAHSFFDELRDPNVKLPNGR 320
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 74 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 133
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 134 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--- 190
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+ + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 249
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 250 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 308
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 309 PLEACAHSFFDELRDPNVKLPNGR 332
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 81 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 140
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 141 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--- 197
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+ + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 198 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 256
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 257 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 315
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 316 PLEACAHSFFDELRDPNVKLPNGR 339
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--- 178
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+ + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 237
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 238 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 297 PLEACAHSFFDELRDPNVKLPNGR 320
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 66 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 125
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 126 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--- 182
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+ + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 241
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 242 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 300
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 301 PLEACAHSFFDELRDPNVKLPNGR 324
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 63 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 122
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 123 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--- 179
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+ + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 180 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 238
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 239 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 297
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 298 PLEACAHSFFDELRDPNVKLPNGR 321
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 147/264 (55%), Gaps = 21/264 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + + +++ + +
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--- 178
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+ + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 237
Query: 201 LLGTPTEDTWPGMNL-LPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+LGTPT + MN +FK FP P+ + L RLL P R++
Sbjct: 238 VLGTPTREQIREMNPNYTEFK-FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT 296
Query: 260 AEDAMSHIYFSDL---NVAIKSER 280
+A +H +F +L NV + + R
Sbjct: 297 PLEACAHSFFDELRDPNVKLPNGR 320
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 147 bits (372), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 148/267 (55%), Gaps = 27/267 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKK----LTLVFEHCDQDL---KKYFDSLNGEIDL 83
RE+ ++++L H NIVRL +S EKK L LV ++ + +++ + +
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPV 121
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAF--GIPVKC 140
VK +MYQL R LA+ HS + HRD+KPQNLL++ + LKL DFG A+ G P
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--- 178
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+ + + +YR P+++FGA YT+SID+WSAGC+ AEL G+P+FPG DQL I K
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIK 237
Query: 201 LLGTPTEDTWPGMNLLPDFKPFPM----YHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+LGTPT + MN P++ F HP + P+ + L RLL P
Sbjct: 238 VLGTPTREQIREMN--PNYTEFAFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTA 293
Query: 257 RMSAEDAMSHIYFSDL---NVAIKSER 280
R++ +A +H +F +L NV + + R
Sbjct: 294 RLTPLEACAHSFFDELRDPNVKLPNGR 320
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 150/309 (48%), Gaps = 67/309 (21%)
Query: 32 LREICLLKELKHKNIVRLYDVL---HSEK--KLTLVFEHCDQDLKKYFDSLNGEIDLDIV 86
LREI +L L H ++V++ D++ EK +L +V E D D KK F + +L I
Sbjct: 100 LREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHI- 158
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS---- 142
K+ +Y LL G+ + HS +LHRDLKP N L+N++ +K+ DFGLAR P S
Sbjct: 159 KTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPI 218
Query: 143 -----------------------AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELA 179
VVT WYR P+++ + YT +ID+WS GCIFAEL
Sbjct: 219 SPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
Query: 180 N---------AGR-PLFPGSDV--------------------DDQLKRIFKLLGTPTEDT 209
N A R PLFPGS DQL IF +LGTP+E+
Sbjct: 279 NMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEED 338
Query: 210 WPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRD---LLQRLLVCNPVQRMSAEDAMSH 266
+ D K + P + +A + A D LL+R+LV NP +R++ + ++H
Sbjct: 339 IEALE-KEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAH 397
Query: 267 IYFSDLNVA 275
+F ++ +A
Sbjct: 398 PFFKEVRIA 406
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ---VI 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 236
Query: 198 IFKLLGTP----TEDTWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 237 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 296
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 297 LLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 147/295 (49%), Gaps = 46/295 (15%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHS-------------------------------- 55
P RE+ ++K L H NI++L D ++
Sbjct: 44 PRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSV 103
Query: 56 ------EKKLTLVFEHCDQDLKKYFDSL---NGEIDLDIVKSFMYQLLRGLAFCHSRNVL 106
K L ++ E+ L K S I ++++ ++YQL R + F HS +
Sbjct: 104 IVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGIC 163
Query: 107 HRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTS 165
HRD+KPQNLL+N K+ LKL DFG A+ IP + A + + +YR P+++ GA YT S
Sbjct: 164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKL-IPSEPSVAXICSRFYRAPELMLGATEYTPS 222
Query: 166 IDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY 225
ID+WS GC+F EL G+PLF G DQL RI +++GTPT++ MN FP
Sbjct: 223 IDLWSIGCVFGELI-LGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTL 281
Query: 226 HPSMSFSQVAPKLTAK-GRDLLQRLLVCNPVQRMSAEDAMSHIYFSDLNVAIKSE 279
+ + ++ P+ T DLL+++L P R++ +AM+H +F L + +SE
Sbjct: 282 K-AKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESE 335
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 236
Query: 198 IFKLLGTP----TEDTWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 237 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 296
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 297 LLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 157/329 (47%), Gaps = 63/329 (19%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVP-SSALREICLLKELKHKNIVRLYDVLHSEK-----K 58
D+ N +AIK + + + + LREI +L LK I+RL+D++ E +
Sbjct: 47 AYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDE 106
Query: 59 LTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLIN 118
L +V E D DLKK F + + VK+ +Y LL G F H ++HRDLKP N L+N
Sbjct: 107 LYIVLEIADSDLKKLFKTPIFLTEQH-VKTILYNLLLGEKFIHESGIIHRDLKPANCLLN 165
Query: 119 KNGELKLADFGLARAFG----IPV---------------------KCYSAEVVTLWYRPP 153
++ +K+ DFGLAR I + K ++ VVT WYR P
Sbjct: 166 QDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAP 225
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGR----------PLFPGSDV------------ 191
+++ + YT SID+WS GCIFAEL N + PLFPGS
Sbjct: 226 ELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKV 285
Query: 192 -----DDQLKRIFKLLGTPTEDTWPGMN---LLPDFKPFPMYHPSMSFSQVAPKLTAKGR 243
DQL IF ++GTP E+ + ++ K FP + S+ ++ +G
Sbjct: 286 HEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPT-RDGIDLSKKYSSISKEGI 344
Query: 244 DLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
DLL+ +L N +R++ + A+SH Y D+
Sbjct: 345 DLLESMLRFNAQKRITIDKALSHPYLKDV 373
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 56 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ---VI 112
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 113 QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 172
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 173 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 229
Query: 198 IFKLLGTP----TEDTWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 230 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 289
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 290 LLSKMLVIDPAKRISVDDALQHPYIN 315
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ---VI 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 236
Query: 198 IFKLLGTP----TEDTWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 237 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 296
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 297 LLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 236
Query: 198 IFKLLGTP----TEDTWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 237 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 296
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 297 LLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 141/268 (52%), Gaps = 29/268 (10%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ G LFPG+D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGG-VLFPGTDHIDQWNK 236
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHP---SMSFSQVAPKL------------TAKG 242
+ + LGTP+ + L P + + P SF ++ P + ++
Sbjct: 237 VIEQLGTPSPEFMK--KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 294
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 295 RDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 141/268 (52%), Gaps = 29/268 (10%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ G LFPG+D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGG-VLFPGTDHIDQWNK 236
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHP---SMSFSQVAPKL------------TAKG 242
+ + LGTP+ + L P + + P SF ++ P + ++
Sbjct: 237 VIEQLGTPSPEFMK--KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 294
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 295 RDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 141/268 (52%), Gaps = 29/268 (10%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ G LFPG+D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGG-VLFPGTDHIDQWNK 236
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHP---SMSFSQVAPKL------------TAKG 242
+ + LGTP+ + L P + + P SF ++ P + ++
Sbjct: 237 VIEQLGTPSPEFMK--KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 294
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 295 RDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 144/269 (53%), Gaps = 31/269 (11%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ LLK + HKNI+ L +V +K L LV E D +L + +
Sbjct: 61 NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV---I 117
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
+ E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 118 HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN 177
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI EL G +F G+D DQ +
Sbjct: 178 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVK-GSVIFQGTDHIDQWNK 234
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPF----PMYHPSMSFSQVAPKL------------TAK 241
+ + LGTP+ + + P + + P Y P ++F ++ P T++
Sbjct: 235 VIEQLGTPSAEFMAALQ--PTVRNYVENRPAY-PGIAFEELFPDWIFPSESERDKIKTSQ 291
Query: 242 GRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV +P +R+S ++A+ H Y +
Sbjct: 292 ARDLLSKMLVIDPDKRISVDEALRHPYIT 320
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV---I 157
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 158 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 218 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 274
Query: 198 IFKLLGTPTED----TWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 275 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 334
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 335 LLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV---I 120
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 181 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 237
Query: 198 IFKLLGTP----TEDTWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 238 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 297
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 298 LLSKMLVIDPAKRISVDDALQHPYIN 323
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 62 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV---I 118
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 119 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 178
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 179 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 235
Query: 198 IFKLLGTP----TEDTWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 236 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 295
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 296 LLSKMLVIDPAKRISVDDALQHPYIN 321
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 236
Query: 198 IFKLLGTP----TEDTWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 237 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 296
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 297 LLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 236
Query: 198 IFKLLGTP----TEDTWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 237 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 296
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 297 LLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV---I 157
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 158 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 218 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 274
Query: 198 IFKLLGTPTED----TWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 275 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 334
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 335 LLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV---I 120
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 181 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 237
Query: 198 IFKLLGTP----TEDTWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 238 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 297
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 298 LLSKMLVIDPAKRISVDDALQHPYIN 323
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 56 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ---VI 112
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 113 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 173 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 229
Query: 198 IFKLLGTPTED----TWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 230 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 289
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 290 LLSKMLVIDPAKRISVDDALQHPYIN 315
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 57 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ---VI 113
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 174 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 230
Query: 198 IFKLLGTP----TEDTWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 231 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 290
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 291 LLSKMLVIDPAKRISVDDALQHPYIN 316
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 25/266 (9%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L LV E D +L + +
Sbjct: 57 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ---VI 113
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 174 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNK 230
Query: 198 IFKLLGTPTED----TWPGMNLLPDFKP------FPMYHPSMSF---SQVAPKLTAKGRD 244
+ + LGTP + P + + +P FP P F S+ ++ RD
Sbjct: 231 VIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 290
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYFS 270
LL ++LV +P +R+S +DA+ H Y +
Sbjct: 291 LLSKMLVIDPAKRISVDDALQHPYIN 316
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 140 bits (352), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 141/268 (52%), Gaps = 29/268 (10%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ EVVT +YR P+V+ G Y ++D+WS GCI E+ G LFPG+D DQ +
Sbjct: 180 F-MMTPEVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGV-LFPGTDHIDQWNK 236
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHP---SMSFSQVAPKL------------TAKG 242
+ + LGTP + L P + + P SF ++ P + ++
Sbjct: 237 VIEQLGTPCPEFMK--KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQA 294
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 295 RDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 140/268 (52%), Gaps = 29/268 (10%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS G I E+ G LFPG+D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGVIMGEMIKGG-VLFPGTDHIDQWNK 236
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHP---SMSFSQVAPKL------------TAKG 242
+ + LGTP+ + L P + + P SF ++ P + ++
Sbjct: 237 VIEQLGTPSPEFMK--KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 294
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 295 RDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 141/268 (52%), Gaps = 29/268 (10%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ G LFPG+D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGG-VLFPGTDHIDQWNK 236
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHP---SMSFSQVAPKL------------TAKG 242
+ + LGTP+ + L P + + P SF ++ P + ++
Sbjct: 237 VIEQLGTPSPEFMK--KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 294
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 295 RDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 140/268 (52%), Gaps = 29/268 (10%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS G I E+ G LFPG+D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGVIMGEMIKGG-VLFPGTDHIDQWNK 236
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHP---SMSFSQVAPKL------------TAKG 242
+ + LGTP+ + L P + + P SF ++ P + ++
Sbjct: 237 VIEQLGTPSPEFMK--KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 294
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 295 RDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 143/269 (53%), Gaps = 31/269 (11%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ LLK + HKNI+ L +V +K L LV E D +L + +
Sbjct: 63 NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
+ E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR
Sbjct: 120 HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI EL G +F G+D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YAANVDIWSVGCIMGELVK-GCVIFQGTDHIDQWNK 236
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPF----PMYHPSMSFSQVAPKL------------TAK 241
+ + LGTP+ + + P + + P Y P + F ++ P T++
Sbjct: 237 VIEQLGTPSAEFMAALQ--PTVRNYVENRPKY-PGIKFEELFPDWIFPSESERDKIKTSQ 293
Query: 242 GRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV +P +R+S ++A+ H Y +
Sbjct: 294 ARDLLSKMLVIDPDKRISVDEALRHPYIT 322
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 141/268 (52%), Gaps = 29/268 (10%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ G LFPG+D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGG-VLFPGTDHIDQWNK 236
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHP---SMSFSQVAPKL------------TAKG 242
+ + LGTP+ + L P + + P SF ++ P + ++
Sbjct: 237 VIEQLGTPSPEFMK--KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 294
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 295 RDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 151/310 (48%), Gaps = 48/310 (15%)
Query: 5 GVDRTPNTALAIKGT-HLVGNEGVPSSALREICLLKELK-HKNIVRLYDVLHSE--KKLT 60
+DR +A+K N REI +L EL H+NIV L +VL ++ + +
Sbjct: 28 SIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87
Query: 61 LVFEHCDQDLKKYFDSLNGEIDLDIVKSFM-YQLLRGLAFCHSRNVLHRDLKPQNLLINK 119
LVF++ + DL + I + K ++ YQL++ + + HS +LHRD+KP N+L+N
Sbjct: 88 LVFDYMETDLHAV---IRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNA 144
Query: 120 NGELKLADFGLARAF--------GIPVK-------------CYSAEVVTLWYRPPDVLFG 158
+K+ADFGL+R+F IP+ + V T WYR P++L G
Sbjct: 145 ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG 204
Query: 159 AKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN---- 214
+ YT IDMWS GCI E+ G+P+FPGS +QL+RI ++ P+ + +
Sbjct: 205 STKYTKGIDMWSLGCILGEIL-CGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFA 263
Query: 215 --LLPDFKPFPMYHPSMS----------FSQVAPKL--TAKGRDLLQRLLVCNPVQRMSA 260
++ K S ++ PK + DLL +LL NP +R+SA
Sbjct: 264 KTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA 323
Query: 261 EDAMSHIYFS 270
DA+ H + S
Sbjct: 324 NDALKHPFVS 333
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 140/268 (52%), Gaps = 29/268 (10%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ G LFPG+D DQ +
Sbjct: 180 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGG-VLFPGTDHIDQWNK 236
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHP---SMSFSQVAPKL------------TAKG 242
+ + LGTP + L P + + P SF ++ P + ++
Sbjct: 237 VIEQLGTPCPEFMK--KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 294
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 295 RDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 140/268 (52%), Gaps = 29/268 (10%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV---I 120
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 121 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ G LFPG+D DQ +
Sbjct: 181 F-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGG-VLFPGTDHIDQWNK 237
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHP---SMSFSQVAPKL------------TAKG 242
+ + LGTP + L P + + P SF ++ P + ++
Sbjct: 238 VIEQLGTPCPEFMK--KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 295
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 296 RDLLSKMLVIDASKRISVDEALQHPYIN 323
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 139/268 (51%), Gaps = 29/268 (10%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
EVVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 180 F-MMEPEVVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMV-CHKILFPGRDYIDQWNK 236
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHP---SMSFSQVAPKL------------TAKG 242
+ + LGTP + L P + + P SF ++ P + ++
Sbjct: 237 VIEQLGTPCPEFMK--KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 294
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 295 RDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 139/268 (51%), Gaps = 29/268 (10%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 65 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV---I 121
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 122 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 181
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
VVT +YR P+V+ G Y ++D+WS GCI E+ G LFPG+D DQ +
Sbjct: 182 FMMVPF-VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGG-VLFPGTDHIDQWNK 238
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHP---SMSFSQVAPKL------------TAKG 242
+ + LGTP + L P + + P SF ++ P + ++
Sbjct: 239 VIEQLGTPCPEFMK--KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 296
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 297 RDLLSKMLVIDASKRISVDEALQHPYIN 324
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 139/270 (51%), Gaps = 33/270 (12%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV---I 119
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 120 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
EVVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 180 F-MMEPEVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMV-CHKILFPGRDYIDQWNK 236
Query: 198 IFKLLGTPTEDTWPGM--NLLPDFKPFPMYHP---SMSFSQVAPKL------------TA 240
+ + LGTP P L P + + P SF ++ P + +
Sbjct: 237 VIEQLGTPC----PAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKAS 292
Query: 241 KGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
+ RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 293 QARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 139/268 (51%), Gaps = 29/268 (10%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 68 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQV---I 124
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 125 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 184
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 185 F-MMTPYVVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMV-CHKILFPGRDYIDQWNK 241
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHP---SMSFSQVAPKL------------TAKG 242
+ + LGTP + L P + + P SF ++ P + ++
Sbjct: 242 VIEQLGTPCPEFMK--KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 299
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 300 RDLLSKMLVIDASKRISVDEALQHPYIN 327
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 139/268 (51%), Gaps = 29/268 (10%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYFDSL 77
N+ A RE+ L+K + HKNI+ L +V +K L +V E D +L + +
Sbjct: 57 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ---VI 113
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
E+D + + +YQ+L G+ HS ++HRDLKP N+++ + LK+ DFGLAR G
Sbjct: 114 QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Query: 138 VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKR 197
+ VVT +YR P+V+ G Y ++D+WS GCI E+ + LFPG D DQ +
Sbjct: 174 F-MMTPYVVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMV-CHKILFPGRDYIDQWNK 230
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHP---SMSFSQVAPKL------------TAKG 242
+ + LGTP + L P + + P SF ++ P + ++
Sbjct: 231 VIEQLGTPCPEFMK--KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQA 288
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
RDLL ++LV + +R+S ++A+ H Y +
Sbjct: 289 RDLLSKMLVIDASKRISVDEALQHPYIN 316
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 139/278 (50%), Gaps = 14/278 (5%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEK----KL 59
+ R NT + +++ + + LREI LL H NI+ L D+ +H E+ KL
Sbjct: 50 AIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKL 109
Query: 60 TLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINK 119
LV E DL + I ++ FMY +L GL H V+HRDL P N+L+
Sbjct: 110 YLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD 169
Query: 120 NGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELA 179
N ++ + DF LAR + V WYR P+++ K +T +DMWSAGC+ AE+
Sbjct: 170 NNDITICDFNLARE-DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
Query: 180 NAGRPLFPGSDVDDQLKRIFKLLGTP-TEDTWPGMNLLPDFKPFPMYH----PSMSFSQV 234
N + LF GS +QL +I +++GTP ED M P + + P+ +++ V
Sbjct: 229 NR-KALFRGSTFYNQLNKIVEVVGTPKIEDVV--MFSSPSARDYLRNSLSNVPARAWTAV 285
Query: 235 APKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
P DL+ ++L NP +R+S E A+ H YF L
Sbjct: 286 VPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 139/278 (50%), Gaps = 14/278 (5%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEK----KL 59
+ R NT + +++ + + LREI LL H NI+ L D+ +H E+ KL
Sbjct: 50 AIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKL 109
Query: 60 TLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINK 119
LV E DL + I ++ FMY +L GL H V+HRDL P N+L+
Sbjct: 110 YLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD 169
Query: 120 NGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELA 179
N ++ + DF LAR + V WYR P+++ K +T +DMWSAGC+ AE+
Sbjct: 170 NNDITICDFNLARE-DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
Query: 180 NAGRPLFPGSDVDDQLKRIFKLLGTP-TEDTWPGMNLLPDFKPFPMYH----PSMSFSQV 234
N + LF GS +QL +I +++GTP ED M P + + P+ +++ V
Sbjct: 229 NR-KALFRGSTFYNQLNKIVEVVGTPKIEDVV--MFSSPSARDYLRNSLSNVPARAWTAV 285
Query: 235 APKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
P DL+ ++L NP +R+S E A+ H YF L
Sbjct: 286 VPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 139/252 (55%), Gaps = 22/252 (8%)
Query: 33 REICLLKELKHK-NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKS 88
REI +L+ L+ NI+ L D++ T LVFEH + D K+ + +L D DI +
Sbjct: 80 REIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLT---DYDI-RF 135
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVT 147
+MY++L+ L +CHS ++HRD+KP N++I+ ++ +L+L D+GLA F P + Y+ V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVAS 194
Query: 148 LWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTE 207
+++ P++L ++Y S+DMWS GC+ A + P F G D DQL RI K+LG TE
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TE 252
Query: 208 DTWP-----GMNLLPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQR 257
D + + L P F H + + ++ + D L +LL + R
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSR 312
Query: 258 MSAEDAMSHIYF 269
++A +AM H YF
Sbjct: 313 LTAREAMEHPYF 324
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 135/239 (56%), Gaps = 21/239 (8%)
Query: 45 NIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI++L D + K LVFE+ + D K+ + L D DI + +MY+LL+ L +CH
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILT---DFDI-RFYMYELLKALDYCH 149
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S+ ++HRD+KP N++I+ + +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQ 208
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TE+ + ++L
Sbjct: 209 MYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLG--TEELYGYLKKYHIDL 266
Query: 216 LPDFKPFPMYHPSMSF-----SQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P F H + S+ ++ + DLL +LL + QR++A++AM H YF
Sbjct: 267 DPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 133/237 (56%), Gaps = 17/237 (7%)
Query: 45 NIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI++L D + K LVFE+ + D K+ + L D DI + +MY+LL+ L +CH
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILT---DFDI-RFYMYELLKALDYCH 154
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S+ ++HRD+KP N++I+ + +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQ 213
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTW---PGMNLLP 217
+Y S+DMWS GC+ A + P F G D DQL RI K+LGT + ++L P
Sbjct: 214 MYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDP 273
Query: 218 DFKPFPMYHPSMSF-----SQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
F H + S+ ++ + DLL +LL + QR++A++AM H YF
Sbjct: 274 HFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 151/288 (52%), Gaps = 26/288 (9%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHS-------EK 57
G +++ ++AIK ++ + + L+ + L L H NIV+L ++ +
Sbjct: 42 GKEKSTGMSVAIK--KVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDI 99
Query: 58 KLTLVFEHCDQDL----KKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH--SRNVLHRDLK 111
L +V E+ L + Y+ + ++K F++QL+R + H S NV HRD+K
Sbjct: 100 YLNVVMEYVPDTLHRCCRNYYRRQVAPPPI-LIKVFLFQLIRSIGCLHLPSVNVCHRDIK 158
Query: 112 PQNLLINK-NGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWS 170
P N+L+N+ +G LKL DFG A+ P + A + + +YR P+++FG + YTT++D+WS
Sbjct: 159 PHNVLVNEADGTLKLCDFGSAKKLS-PSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWS 217
Query: 171 AGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHP--- 227
GCIFAE+ G P+F G + QL I ++LG P+ + +N P +Y+
Sbjct: 218 VGCIFAEMM-LGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLN--PSHTDVDLYNSKGI 274
Query: 228 --SMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDLN 273
S FS + K + DLL LL P +RM +A+ H YF +L+
Sbjct: 275 PWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 131/239 (54%), Gaps = 21/239 (8%)
Query: 45 NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI+ L D++ T LVFEH + D K+ + +L D DI + +MY++L+ L +CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLT---DYDI-RFYMYEILKALDYCH 148
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S ++HRD+KP N+LI+ ++ +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 149 SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TED + + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIEL 265
Query: 216 LPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P F H + + ++ + D L +LL + R++A +AM H YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 138/246 (56%), Gaps = 17/246 (6%)
Query: 45 NIVRLYDVLHSE--KKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NIV+L D++ + K +L+FE+ + D K + +L D DI + ++Y+LL+ L +CH
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT---DYDI-RYYIYELLKALDYCH 143
Query: 102 SRNVLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S+ ++HRD+KP N++I+ +L+L D+GLA F P K Y+ V + +++ P++L +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPG---MNLLP 217
Y S+DMWS GC+FA + P F G D DQL +I K+LGT + + + L P
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 262
Query: 218 DFKPFPMYH---PSMSFSQVAPK--LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
+ H P + F + ++ + D L +LL + +R++A +AM+H YF +
Sbjct: 263 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 322
Query: 273 NVAIKS 278
A S
Sbjct: 323 RAAENS 328
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 138/246 (56%), Gaps = 17/246 (6%)
Query: 45 NIVRLYDVLHSE--KKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NIV+L D++ + K +L+FE+ + D K + +L D DI + ++Y+LL+ L +CH
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT---DYDI-RYYIYELLKALDYCH 144
Query: 102 SRNVLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S+ ++HRD+KP N++I+ +L+L D+GLA F P K Y+ V + +++ P++L +
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 203
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPG---MNLLP 217
Y S+DMWS GC+FA + P F G D DQL +I K+LGT + + + L P
Sbjct: 204 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 263
Query: 218 DFKPFPMYH---PSMSFSQVAPK--LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
+ H P + F + ++ + D L +LL + +R++A +AM+H YF +
Sbjct: 264 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 323
Query: 273 NVAIKS 278
A S
Sbjct: 324 RAAENS 329
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 138/246 (56%), Gaps = 17/246 (6%)
Query: 45 NIVRLYDVLHSE--KKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NIV+L D++ + K +L+FE+ + D K + +L D DI + ++Y+LL+ L +CH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT---DYDI-RYYIYELLKALDYCH 142
Query: 102 SRNVLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S+ ++HRD+KP N++I+ +L+L D+GLA F P K Y+ V + +++ P++L +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPG---MNLLP 217
Y S+DMWS GC+FA + P F G D DQL +I K+LGT + + + L P
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 218 DFKPFPMYH---PSMSFSQVAPK--LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
+ H P + F + ++ + D L +LL + +R++A +AM+H YF +
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
Query: 273 NVAIKS 278
A S
Sbjct: 322 RAAENS 327
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 138/246 (56%), Gaps = 17/246 (6%)
Query: 45 NIVRLYDVLHSE--KKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NIV+L D++ + K +L+FE+ + D K + +L D DI + ++Y+LL+ L +CH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT---DYDI-RYYIYELLKALDYCH 142
Query: 102 SRNVLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S+ ++HRD+KP N++I+ +L+L D+GLA F P K Y+ V + +++ P++L +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPG---MNLLP 217
Y S+DMWS GC+FA + P F G D DQL +I K+LGT + + + L P
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 218 DFKPFPMYH---PSMSFSQVAPK--LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
+ H P + F + ++ + D L +LL + +R++A +AM+H YF +
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
Query: 273 NVAIKS 278
A S
Sbjct: 322 RAAENS 327
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 131/239 (54%), Gaps = 21/239 (8%)
Query: 45 NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI+ L D++ T LVFEH + D K+ + +L D DI + +MY++L+ L +CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLT---DYDI-RFYMYEILKALDYCH 148
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S ++HRD+KP N++I+ ++ +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TED + + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIEL 265
Query: 216 LPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P F H + + ++ + D L +LL + R++A +AM H YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 138/246 (56%), Gaps = 17/246 (6%)
Query: 45 NIVRLYDVLHSE--KKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NIV+L D++ + K +L+FE+ + D K + +L D DI + ++Y+LL+ L +CH
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT---DYDI-RYYIYELLKALDYCH 163
Query: 102 SRNVLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S+ ++HRD+KP N++I+ +L+L D+GLA F P K Y+ V + +++ P++L +
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 222
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPG---MNLLP 217
Y S+DMWS GC+FA + P F G D DQL +I K+LGT + + + L P
Sbjct: 223 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDP 282
Query: 218 DFKPFPMYH---PSMSFSQVAPK--LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
+ H P + F + ++ + D L +LL + +R++A +AM+H YF +
Sbjct: 283 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 342
Query: 273 NVAIKS 278
A S
Sbjct: 343 RAAENS 348
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 131/239 (54%), Gaps = 21/239 (8%)
Query: 45 NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI+ L D++ T LVFEH + D K+ + +L D DI + +MY++L+ L +CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLT---DYDI-RFYMYEILKALDYCH 148
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S ++HRD+KP N++I+ ++ +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TED + + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIEL 265
Query: 216 LPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P F H + + ++ + D L +LL + R++A +AM H YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 131/239 (54%), Gaps = 21/239 (8%)
Query: 45 NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI+ L D++ T LVFEH + D K+ + +L D DI + +MY++L+ L +CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLT---DYDI-RFYMYEILKALDYCH 148
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S ++HRD+KP N++I+ ++ +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TED + + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIEL 265
Query: 216 LPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P F H + + ++ + D L +LL + R++A +AM H YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 138/246 (56%), Gaps = 17/246 (6%)
Query: 45 NIVRLYDVLHSE--KKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NIV+L D++ + K +L+FE+ + D K + +L D DI + ++Y+LL+ L +CH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT---DYDI-RYYIYELLKALDYCH 142
Query: 102 SRNVLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S+ ++HRD+KP N++I+ +L+L D+GLA F P K Y+ V + +++ P++L +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPG---MNLLP 217
Y S+DMWS GC+FA + P F G D DQL +I K+LGT + + + L P
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 218 DFKPFPMYH---PSMSFSQVAPK--LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
+ H P + F + ++ + D L +LL + +R++A +AM+H YF +
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
Query: 273 NVAIKS 278
A S
Sbjct: 322 RAAENS 327
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 131/239 (54%), Gaps = 21/239 (8%)
Query: 45 NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI+ L D++ T LVFEH + D K+ + +L D DI + +MY++L+ L +CH
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLT---DYDI-RFYMYEILKALDYCH 147
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S ++HRD+KP N++I+ ++ +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TED + + L
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIEL 264
Query: 216 LPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P F H + + ++ + D L +LL + R++A +AM H YF
Sbjct: 265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 131/239 (54%), Gaps = 21/239 (8%)
Query: 45 NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI+ L D++ T LVFEH + D K+ + +L D DI + +MY++L+ L +CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLT---DYDI-RFYMYEILKALDYCH 148
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S ++HRD+KP N++I+ ++ +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TED + + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIEL 265
Query: 216 LPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P F H + + ++ + D L +LL + R++A +AM H YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 138/246 (56%), Gaps = 17/246 (6%)
Query: 45 NIVRLYDVLHSE--KKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NIV+L D++ + K +L+FE+ + D K + +L D DI + ++Y+LL+ L +CH
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT---DYDI-RYYIYELLKALDYCH 143
Query: 102 SRNVLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S+ ++HRD+KP N++I+ +L+L D+GLA F P K Y+ V + +++ P++L +
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPG---MNLLP 217
Y S+DMWS GC+FA + P F G D DQL +I K+LGT + + + L P
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 262
Query: 218 DFKPFPMYH---PSMSFSQVAPK--LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
+ H P + F + ++ + D L +LL + +R++A +AM+H YF +
Sbjct: 263 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 322
Query: 273 NVAIKS 278
A S
Sbjct: 323 RAAENS 328
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 131/239 (54%), Gaps = 21/239 (8%)
Query: 45 NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI+ L D++ T LVFEH + D K+ + +L D DI + +MY++L+ L +CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLT---DYDI-RFYMYEILKALDYCH 148
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S ++HRD+KP N++I+ ++ +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TED + + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIEL 265
Query: 216 LPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P F H + + ++ + D L +LL + R++A +AM H YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 131/239 (54%), Gaps = 21/239 (8%)
Query: 45 NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI+ L D++ T LVFEH + D K+ + +L D DI + +MY++L+ L +CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLT---DYDI-RFYMYEILKALDYCH 148
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S ++HRD+KP N++I+ ++ +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TED + + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIEL 265
Query: 216 LPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P F H + + ++ + D L +LL + R++A +AM H YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 131/239 (54%), Gaps = 21/239 (8%)
Query: 45 NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI+ L D++ T LVFEH + D K+ + +L D DI + +MY++L+ L +CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLT---DYDI-RFYMYEILKALDYCH 148
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S ++HRD+KP N++I+ ++ +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TED + + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIEL 265
Query: 216 LPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P F H + + ++ + D L +LL + R++A +AM H YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 131/239 (54%), Gaps = 21/239 (8%)
Query: 45 NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI+ L D++ T LVFEH + D K+ + +L D DI + +MY++L+ L +CH
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLT---DYDI-RFYMYEILKALDYCH 147
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S ++HRD+KP N++I+ ++ +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TED + + L
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIEL 264
Query: 216 LPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P F H + + ++ + D L +LL + R++A +AM H YF
Sbjct: 265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 131/239 (54%), Gaps = 21/239 (8%)
Query: 45 NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI+ L D++ T LVFEH + D K+ + +L D DI + +MY++L+ L +CH
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLT---DYDI-RFYMYEILKALDYCH 153
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S ++HRD+KP N++I+ ++ +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 154 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQ 212
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TED + + L
Sbjct: 213 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIEL 270
Query: 216 LPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P F H + + ++ + D L +LL + R++A +AM H YF
Sbjct: 271 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 137/251 (54%), Gaps = 22/251 (8%)
Query: 45 NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI+ L D++ T LVFEH + D K+ + +L D DI + +MY++L+ L +CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLT---DYDI-RFYMYEILKALDYCH 148
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S ++HRD+KP N++I+ ++ +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TED + + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIEL 265
Query: 216 LPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
P F H + + ++ + D L +LL + R++A +AM H YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 325
Query: 271 DLNVAIKSERC 281
+ V +S+ C
Sbjct: 326 PV-VKEQSQPC 335
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 137/243 (56%), Gaps = 17/243 (6%)
Query: 45 NIVRLYDVLHSE--KKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NIV+L D++ + K +L+FE+ + D K + +L D DI + ++Y+LL+ L +CH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT---DYDI-RYYIYELLKALDYCH 142
Query: 102 SRNVLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S+ ++HRD+KP N++I+ +L+L D+GLA F P K Y+ V + +++ P++L +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPG---MNLLP 217
Y S+DMWS GC+FA + P F G D DQL +I K+LGT + + + L P
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 218 DFKPFPMYH---PSMSFSQVAPK--LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
+ H P + F + ++ + D L +LL + +R++A +AM+H YF +
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
Query: 273 NVA 275
A
Sbjct: 322 RAA 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 131/239 (54%), Gaps = 21/239 (8%)
Query: 45 NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI+ L D++ T LVFEH + D K+ + +L D DI + +MY++L+ L +CH
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLT---DYDI-RFYMYEILKALDYCH 146
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S ++HRD+KP N++I+ ++ +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQ 205
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TED + + L
Sbjct: 206 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIEL 263
Query: 216 LPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P F H + + ++ + D L +LL + R++A +AM H YF
Sbjct: 264 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 137/243 (56%), Gaps = 17/243 (6%)
Query: 45 NIVRLYDVLHSE--KKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NIV+L D++ + K +L+FE+ + D K + +L D DI + ++Y+LL+ L +CH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT---DYDI-RYYIYELLKALDYCH 142
Query: 102 SRNVLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S+ ++HRD+KP N++I+ +L+L D+GLA F P K Y+ V + +++ P++L +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPG---MNLLP 217
Y S+DMWS GC+FA + P F G D DQL +I K+LGT + + + L P
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 218 DFKPFPMYH---PSMSFSQVAPK--LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
+ H P + F + ++ + D L +LL + +R++A +AM+H YF +
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
Query: 273 NVA 275
A
Sbjct: 322 RAA 324
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 137/243 (56%), Gaps = 17/243 (6%)
Query: 45 NIVRLYDVLHSE--KKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NIV+L D++ + K +L+FE+ + D K + +L D DI + ++Y+LL+ L +CH
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLT---DYDI-RYYIYELLKALDYCH 142
Query: 102 SRNVLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S+ ++HRD+KP N++I+ +L+L D+GLA F P K Y+ V + +++ P++L +
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPG---MNLLP 217
Y S+DMWS GC+FA + P F G D DQL +I K+LGT + + + L P
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 218 DFKPFPMYH---PSMSFSQVAPK--LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
+ H P + F + ++ + D L +LL + +R++A +AM+H YF +
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
Query: 273 NVA 275
A
Sbjct: 322 RAA 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 130/239 (54%), Gaps = 21/239 (8%)
Query: 45 NIVRLYDVLHSEKKLT--LVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
NI+ L D++ T LVFEH + D K+ +L D DI + +MY++L+ L +CH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQTLT---DYDI-RFYMYEILKALDYCH 148
Query: 102 SRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
S ++HRD+KP N++I+ ++ +L+L D+GLA F P + Y+ V + +++ P++L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP-----GMNL 215
+Y S+DMWS GC+ A + P F G D DQL RI K+LG TED + + L
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG--TEDLYDYIDKYNIEL 265
Query: 216 LPDFKPFPMYHPSMSFSQVAPK-----LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P F H + + ++ + D L +LL + R++A +AM H YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 118/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAP--LGTVYRELQKLSKFDE 107
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +A
Sbjct: 108 QRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAA 165
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + D KRI ++
Sbjct: 166 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQDTYKRISRVEF 223
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 224 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 254
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 255 LEHPWIT 261
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 120/246 (48%), Gaps = 35/246 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLD 84
GV RE+ + L+H NI+RLY H ++ L+ E+ + ++ K L+ + D
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS-KFDEQ 113
Query: 85 IVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE 144
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTL 171
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++ T
Sbjct: 172 CGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEFT 229
Query: 205 PTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
PDF +T RDL+ RLL NP QR + +
Sbjct: 230 -----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREVL 260
Query: 265 SHIYFS 270
H + +
Sbjct: 261 EHPWIT 266
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 118/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 110
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +A
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAA 168
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 169 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 226
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 227 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 257
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 258 LEHPWIT 264
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 119/246 (48%), Gaps = 35/246 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLD 84
GV RE+ + L+H NI+RLY H ++ L+ E+ + ++ K L+ + D
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS-KFDEQ 113
Query: 85 IVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE 144
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXL 171
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++ T
Sbjct: 172 XGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEFT 229
Query: 205 PTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
PDF +T RDL+ RLL NP QR + +
Sbjct: 230 -----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREVL 260
Query: 265 SHIYFS 270
H + +
Sbjct: 261 EHPWIT 266
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 118/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 107
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +A
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAA 165
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 166 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 223
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 224 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 254
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 255 LEHPWIT 261
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 76 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 133
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTT 191
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 192 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 249
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 250 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 280
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 281 LEHPWIT 287
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 67 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 124
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 125 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTT 182
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 183 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 240
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 241 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 271
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 272 LEHPWIT 278
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 110
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTT 168
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 169 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 226
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 227 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 257
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 258 LEHPWIT 264
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 112
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTT 170
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 171 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 228
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 229 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 259
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 260 LEHPWIT 266
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 107
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTT 165
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 166 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 223
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 224 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 254
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 255 LEHPWIT 261
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 49 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 106
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 107 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTT 164
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 165 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 222
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 223 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 253
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 254 LEHPWIT 260
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 107
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTE 165
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 166 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 223
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 224 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 254
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 255 LEHPWIT 261
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 111
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 112 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTT 169
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 170 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 227
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 228 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 258
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 259 LEHPWIT 265
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 110
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTT 168
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 169 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 226
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 227 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 257
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 258 LEHPWIT 264
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 47 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 104
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 105 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTT 162
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 163 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 220
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 221 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 251
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 252 LEHPWIT 258
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 107
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTX 165
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 166 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 223
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 224 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 254
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 255 LEHPWIT 261
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 108
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SCHAPSSRRTT 166
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 167 LSGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 224
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 225 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 255
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 256 LEHPWIT 262
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 112
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTD 170
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 171 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 228
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 229 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 259
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 260 LEHPWIT 266
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 107
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTD 165
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 166 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 223
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 224 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 254
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 255 LEHPWIT 261
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 76 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 133
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRDD 191
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 192 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 249
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 250 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 280
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 281 LEHPWIT 287
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 107
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTD 165
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 166 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 223
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 224 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 254
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 255 LEHPWIT 261
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 108
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRDT 166
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 167 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 224
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 225 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 255
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 256 LEHPWIT 262
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 108
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTD 166
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 167 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 224
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 225 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 255
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 256 LEHPWIT 262
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 115/247 (46%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 112
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P +
Sbjct: 113 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTT 170
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+ + G + + +D+WS G + E G+P F + + KRI ++
Sbjct: 171 LCGTLDYLPPEXIEG-RXHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 228
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 229 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPXLREV 259
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 260 LEHPWIT 266
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 52 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 109
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P
Sbjct: 110 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXX 167
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 168 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 225
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 226 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 256
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 257 LEHPWIT 263
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 110
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXX 168
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 169 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 226
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 227 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 257
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 258 LEHPWIT 264
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 114/243 (46%), Gaps = 37/243 (15%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L D
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSRFDE 111
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ NGELK+ADFG + P +
Sbjct: 112 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGW--SVHAPSSRRTT 169
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G P F + +RI ++
Sbjct: 170 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGMPPFEAHTYQETYRRISRVEF 227
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL N QR++ +
Sbjct: 228 T-----------FPDF------------------VTEGARDLISRLLKHNASQRLTLAEV 258
Query: 264 MSH 266
+ H
Sbjct: 259 LEH 261
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 107
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P
Sbjct: 108 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXX 165
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 166 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 223
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 224 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 254
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 255 LEHPWIT 261
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 52 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 109
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+A+FG + P +
Sbjct: 110 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGW--SVHAPSSRRTT 167
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 168 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 225
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 226 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 256
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 257 LEHPWIT 263
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 117/247 (47%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 110
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+A+FG + P +
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGW--SVHAPSSRRTT 168
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 169 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 226
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 227 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 257
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 258 LEHPWIT 264
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 37/247 (14%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L + D
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSKFDE 110
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ GELK+ADFG + P
Sbjct: 111 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRDD 168
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G+P F + + KRI ++
Sbjct: 169 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGKPPFEANTYQETYKRISRVEF 226
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL NP QR +
Sbjct: 227 T-----------FPDF------------------VTEGARDLISRLLKHNPSQRPMLREV 257
Query: 264 MSHIYFS 270
+ H + +
Sbjct: 258 LEHPWIT 264
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 37/243 (15%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN--GEIDL 83
GV RE+ + L+H NI+RLY H ++ L+ E+ L + L D
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--LGTVYRELQKLSRFDE 111
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA 143
+++ +L L++CHS+ V+HRD+KP+NLL+ NGELK+ADFG + P
Sbjct: 112 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGW--SVHAPSSRRDT 169
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
TL Y PP+++ G +++ +D+WS G + E G P F + +RI ++
Sbjct: 170 LCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFL-VGMPPFEAHTYQETYRRISRVEF 227
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
T PDF +T RDL+ RLL N QR++ +
Sbjct: 228 T-----------FPDF------------------VTEGARDLISRLLKHNASQRLTLAEV 258
Query: 264 MSH 266
+ H
Sbjct: 259 LEH 261
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 118/255 (46%), Gaps = 35/255 (13%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
AL + + EGV REI + L+H NI+R+Y+ H K++ L+ E + +L
Sbjct: 44 ALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY 103
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
K +G D +FM +L L +CH R V+HRD+KP+NLL+ GELK+ADFG
Sbjct: 104 KELQK-HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW- 161
Query: 132 RAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDV 191
+ P TL Y PP+++ G K + +D+W AG + E G P F
Sbjct: 162 -SVHAPSLRRRXMCGTLDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFL-VGMPPFDSPSH 218
Query: 192 DDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLV 251
+ +RI +N+ F PF L+ +DL+ +LL
Sbjct: 219 TETHRRI--------------VNVDLKFPPF---------------LSDGSKDLISKLLR 249
Query: 252 CNPVQRMSAEDAMSH 266
+P QR+ + M H
Sbjct: 250 YHPPQRLPLKGVMEH 264
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 118/255 (46%), Gaps = 35/255 (13%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
AL + + EGV REI + L+H NI+R+Y+ H K++ L+ E + +L
Sbjct: 43 ALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY 102
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
K +G D +FM +L L +CH R V+HRD+KP+NLL+ GELK+ADFG
Sbjct: 103 KELQK-HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW- 160
Query: 132 RAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDV 191
+ P TL Y PP+++ G K + +D+W AG + E G P F
Sbjct: 161 -SVHAPSLRRRXMCGTLDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFL-VGMPPFDSPSH 217
Query: 192 DDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLV 251
+ +RI +N+ F PF L+ +DL+ +LL
Sbjct: 218 TETHRRI--------------VNVDLKFPPF---------------LSDGSKDLISKLLR 248
Query: 252 CNPVQRMSAEDAMSH 266
+P QR+ + M H
Sbjct: 249 YHPPQRLPLKGVMEH 263
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 118/255 (46%), Gaps = 35/255 (13%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
AL + + EGV REI + L+H NI+R+Y+ H K++ L+ E + +L
Sbjct: 43 ALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY 102
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
K +G D +FM +L L +CH R V+HRD+KP+NLL+ GELK+ADFG
Sbjct: 103 KELQK-HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW- 160
Query: 132 RAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDV 191
+ P TL Y PP+++ G K + +D+W AG + E G P F
Sbjct: 161 -SVHAPSLRRRXMCGTLDYLPPEMIEG-KTHDEKVDLWCAGVLCYEFL-VGMPPFDSPSH 217
Query: 192 DDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLV 251
+ +RI +N+ F PF L+ +DL+ +LL
Sbjct: 218 TETHRRI--------------VNVDLKFPPF---------------LSDGSKDLISKLLR 248
Query: 252 CNPVQRMSAEDAMSH 266
+P QR+ + M H
Sbjct: 249 YHPPQRLPLKGVMEH 263
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 127/260 (48%), Gaps = 38/260 (14%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE-HCDQDLK 71
A+ + V + S LRE+ LLK+L H NI++LY+ + LV E + +L
Sbjct: 61 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL- 119
Query: 72 KYFDSLNGEIDLDIVKS--FMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLA 126
FD + V + + Q+L G+ + H ++HRDLKP+NLL+ +K+ +++
Sbjct: 120 --FDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII 177
Query: 127 DFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
DFGL+ F K ++ T +Y P+VL G Y D+WS G I L +G P F
Sbjct: 178 DFGLSTHFEASKKM-KDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILL-SGCPPF 233
Query: 187 PGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLL 246
G++ D LK++ K G T + LP +K K++ +DL+
Sbjct: 234 NGANEYDILKKVEK--GKYTFE-------LPQWK----------------KVSESAKDLI 268
Query: 247 QRLLVCNPVQRMSAEDAMSH 266
+++L P R+SA DA+ H
Sbjct: 269 RKMLTYVPSMRISARDALDH 288
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 43/239 (17%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL--NGEIDLDIVKSF 89
RE+ ++K L H NIV+L++V+ +EK L L+ E+ + FD L +G + +S
Sbjct: 59 FREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG--EVFDYLVAHGRMKEKEARSK 116
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVK----CYSAEV 145
Q++ + +CH + ++HRDLK +NLL++ + +K+ADFG + F + K C S
Sbjct: 117 FRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPP- 175
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
Y P++ G K +D+WS G I L + P F G ++ + +R+ +
Sbjct: 176 ----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLR----- 225
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
G +P + ++ +LL+R LV NP++R + E M
Sbjct: 226 ------GKYRIPFY------------------MSTDCENLLKRFLVLNPIKRGTLEQIM 260
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 127/258 (49%), Gaps = 34/258 (13%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE-HCDQDLK 71
A+ + V + S LRE+ LLK+L H NI++LY+ + LV E + +L
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 114
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADF 128
S ++D + + Q+L G+ + H ++HRDLKP+NLL+ +K+ +++ DF
Sbjct: 115 DEIISRKRFSEVDAAR-IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDF 173
Query: 129 GLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG 188
GL+ F K ++ T +Y P+VL G Y D+WS G I L +G P F G
Sbjct: 174 GLSTHFEASKKM-KDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILL-SGCPPFNG 229
Query: 189 SDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQR 248
++ D LK++ K G T + LP +K K++ +DL+++
Sbjct: 230 ANEYDILKKVEK--GKYTFE-------LPQWK----------------KVSESAKDLIRK 264
Query: 249 LLVCNPVQRMSAEDAMSH 266
+L P R+SA DA+ H
Sbjct: 265 MLTYVPSMRISARDALDH 282
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 122/241 (50%), Gaps = 34/241 (14%)
Query: 30 SALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE-HCDQDLKKYFDSLNGEIDLDIVKS 88
S LRE+ LLK+L H NI++LY+ + LV E + +L S ++D +
Sbjct: 95 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR- 153
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVKCYSAEV 145
+ Q+L G+ + H ++HRDLKP+NLL+ +K+ +++ DFGL+ F K ++
Sbjct: 154 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM-KDKI 212
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
T +Y P+VL G Y D+WS G I L +G P F G++ D LK++ K G
Sbjct: 213 GTAYYIAPEVLHGT--YDEKCDVWSTGVILYILL-SGCPPFNGANEYDILKKVEK--GKY 267
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMS 265
T + LP +K K++ +DL++++L P R+SA DA+
Sbjct: 268 TFE-------LPQWK----------------KVSESAKDLIRKMLTYVPSMRISARDALD 304
Query: 266 H 266
H
Sbjct: 305 H 305
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 33/255 (12%)
Query: 26 GVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLNGEIDLD 84
G+ E+ + +LKH +I+ LY+ + LV E C + ++ +Y + +
Sbjct: 53 GMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN 112
Query: 85 IVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE 144
+ FM+Q++ G+ + HS +LHRDL NLL+ +N +K+ADFGLA +P + +
Sbjct: 113 EARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL 172
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
T Y P++ + + D+WS GC+F L GRP F V + L ++
Sbjct: 173 CGTPNYISPEIATRSA-HGLESDVWSLGCMFYTLL-IGRPPFDTDTVKNTLNKV------ 224
Query: 205 PTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
+L D++ PS L+ + +DL+ +LL NP R+S +
Sbjct: 225 ----------VLADYEM-----PSF--------LSIEAKDLIHQLLRRNPADRLSLSSVL 261
Query: 265 SHIYFSDLNVAIKSE 279
H + S N + KS+
Sbjct: 262 DHPFMSR-NSSTKSK 275
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 35/235 (14%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL--NGEIDLDIVKSF 89
RE+ ++K L H NIV+L++V+ +EK L L+ E+ + FD L +G + +S
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG--EVFDYLVAHGRMKEKEARSK 119
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW 149
Q++ + +CH + ++HRDLK +NLL++ + +K+ADFG + F + K A
Sbjct: 120 FRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL-DAFCGAPP 178
Query: 150 YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDT 209
Y P++ G K +D+WS G I L + P F G ++ + +R+ +
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLR--------- 228
Query: 210 WPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
G +P + ++ +LL+R LV NP++R + E M
Sbjct: 229 --GKYRIPFY------------------MSTDCENLLKRFLVLNPIKRGTLEQIM 263
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 40/262 (15%)
Query: 12 TALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLK 71
AL I ++ + REI L+ L+H +I++LYDV+ S+ ++ +V E+ +L
Sbjct: 36 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 95
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
Y + + + + F Q++ + +CH ++HRDLKP+NLL++++ +K+ADFGL+
Sbjct: 96 DYIVQRDKMSEQE-ARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 154
Query: 132 RAFG----IPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFP 187
+ C S Y P+V+ G +D+WS G I + P
Sbjct: 155 NIMTDGNFLKTSCGSPN-----YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-- 207
Query: 188 GSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQ 247
D+ + +FK + G+ LP F L+ L++
Sbjct: 208 ---DDESIPVLFKNISN-------GVYTLPKF------------------LSPGAAGLIK 239
Query: 248 RLLVCNPVQRMSAEDAMSHIYF 269
R+L+ NP+ R+S + M +F
Sbjct: 240 RMLIVNPLNRISIHEIMQDDWF 261
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 40/262 (15%)
Query: 12 TALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLK 71
AL I ++ + REI L+ L+H +I++LYDV+ S+ ++ +V E+ +L
Sbjct: 41 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 100
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
Y + + + + F Q++ + +CH ++HRDLKP+NLL++++ +K+ADFGL+
Sbjct: 101 DYIVQRDKMSEQE-ARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 159
Query: 132 RAFG----IPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFP 187
+ C S Y P+V+ G +D+WS G I + P
Sbjct: 160 NIMTDGNFLKTSCGSPN-----YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-- 212
Query: 188 GSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQ 247
D+ + +FK + G+ LP F L+ L++
Sbjct: 213 ---DDESIPVLFKNISN-------GVYTLPKF------------------LSPGAAGLIK 244
Query: 248 RLLVCNPVQRMSAEDAMSHIYF 269
R+L+ NP+ R+S + M +F
Sbjct: 245 RMLIVNPLNRISIHEIMQDDWF 266
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 122/241 (50%), Gaps = 34/241 (14%)
Query: 30 SALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE-HCDQDLKKYFDSLNGEIDLDIVKS 88
S LRE+ LLK+L H NI++LY+ + LV E + +L S ++D +
Sbjct: 96 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR- 154
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVKCYSAEV 145
+ Q+L G+ + H ++HRDLKP+NLL+ +K+ +++ DFGL+ F K ++
Sbjct: 155 IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM-KDKI 213
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
T +Y P+VL G Y D+WS G I L +G P F G++ D LK++ K G
Sbjct: 214 GTAYYIAPEVLHGT--YDEKCDVWSTGVILYILL-SGCPPFNGANEYDILKKVEK--GKY 268
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMS 265
T + LP +K K++ +DL++++L P R+SA DA+
Sbjct: 269 TFE-------LPQWK----------------KVSESAKDLIRKMLTYVPSMRISARDALD 305
Query: 266 H 266
H
Sbjct: 306 H 306
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 40/262 (15%)
Query: 12 TALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLK 71
AL I ++ + REI L+ L+H +I++LYDV+ S+ ++ +V E+ +L
Sbjct: 32 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 91
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
Y + + + + F Q++ + +CH ++HRDLKP+NLL++++ +K+ADFGL+
Sbjct: 92 DYIVQRDKMSEQE-ARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 150
Query: 132 RAFG----IPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFP 187
+ C S Y P+V+ G +D+WS G I + P
Sbjct: 151 NIMTDGNFLKTSCGSPN-----YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-- 203
Query: 188 GSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQ 247
D+ + +FK + G+ LP F L+ L++
Sbjct: 204 ---DDESIPVLFKNISN-------GVYTLPKF------------------LSPGAAGLIK 235
Query: 248 RLLVCNPVQRMSAEDAMSHIYF 269
R+L+ NP+ R+S + M +F
Sbjct: 236 RMLIVNPLNRISIHEIMQDDWF 257
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 40/262 (15%)
Query: 12 TALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLK 71
AL I ++ + REI L+ L+H +I++LYDV+ S+ ++ +V E+ +L
Sbjct: 42 VALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELF 101
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
Y + + + + F Q++ + +CH ++HRDLKP+NLL++++ +K+ADFGL+
Sbjct: 102 DYIVQRDKMSEQE-ARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 160
Query: 132 RAFG----IPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFP 187
+ C S Y P+V+ G +D+WS G I + P
Sbjct: 161 NIMTDGNFLKTSCGSPN-----YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF-- 213
Query: 188 GSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQ 247
D+ + +FK + G+ LP F L+ L++
Sbjct: 214 ---DDESIPVLFKNISN-------GVYTLPKF------------------LSPGAAGLIK 245
Query: 248 RLLVCNPVQRMSAEDAMSHIYF 269
R+L+ NP+ R+S + M +F
Sbjct: 246 RMLIVNPLNRISIHEIMQDDWF 267
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 125/260 (48%), Gaps = 38/260 (14%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE-HCDQDLK 71
A+ + V + S LRE+ LLK+L H NI +LY+ + LV E + +L
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL- 113
Query: 72 KYFDSLNGEIDLDIVKS--FMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLA 126
FD + V + + Q+L G+ + H ++HRDLKP+NLL+ +K+ +++
Sbjct: 114 --FDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRII 171
Query: 127 DFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
DFGL+ F K ++ T +Y P+VL G Y D+WS G I L +G P F
Sbjct: 172 DFGLSTHFEASKKX-KDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILL-SGCPPF 227
Query: 187 PGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLL 246
G++ D LK++ K G T + LP +K K++ +DL+
Sbjct: 228 NGANEYDILKKVEK--GKYTFE-------LPQWK----------------KVSESAKDLI 262
Query: 247 QRLLVCNPVQRMSAEDAMSH 266
++ L P R+SA DA+ H
Sbjct: 263 RKXLTYVPSXRISARDALDH 282
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 106/214 (49%), Gaps = 29/214 (13%)
Query: 30 SALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYF--DSLNGEI 81
A EI +L+ L+ ++ +V+H + T + FE +L + + G
Sbjct: 139 QAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-F 197
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE--LKLADFGLARAFGIPVK 139
L +V+ F + +L+ L H ++H DLKP+N+L+ + G +K+ DFG +
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS-------- 249
Query: 140 CYSAEVV-----TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQ 194
CY + V + +YR P+V+ GA+ Y IDMWS GCI AEL G PL PG D DQ
Sbjct: 250 CYEHQRVYTXIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELL-TGYPLLPGEDEGDQ 307
Query: 195 LKRIFKLLGTPTEDTWPGMNLLPDF---KPFPMY 225
L + +LLG P++ +F K +P Y
Sbjct: 308 LACMIELLGMPSQKLLDASKRAKNFVSXKGYPRY 341
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 106/214 (49%), Gaps = 29/214 (13%)
Query: 30 SALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYF--DSLNGEI 81
A EI +L+ L+ ++ +V+H + T + FE +L + + G
Sbjct: 139 QAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-F 197
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE--LKLADFGLARAFGIPVK 139
L +V+ F + +L+ L H ++H DLKP+N+L+ + G +K+ DFG +
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS-------- 249
Query: 140 CYSAEVV-----TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQ 194
CY + V + +YR P+V+ GA+ Y IDMWS GCI AEL G PL PG D DQ
Sbjct: 250 CYEHQRVYTXIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELL-TGYPLLPGEDEGDQ 307
Query: 195 LKRIFKLLGTPTEDTWPGMNLLPDF---KPFPMY 225
L + +LLG P++ +F K +P Y
Sbjct: 308 LACMIELLGMPSQKLLDASKRAKNFVSXKGYPRY 341
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 123/245 (50%), Gaps = 40/245 (16%)
Query: 33 REICLLKELKHKNIVRLYDVLHSE--KKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFM 90
+EI LL+ L+HKN+++L DVL++E +K+ +V E+C +++ DS+ E + ++
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP-EKRFPVCQAHG 113
Query: 91 Y--QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARA---FGIPVKCYSAEV 145
Y QL+ GL + HS+ ++H+D+KP NLL+ G LK++ G+A A F C +++
Sbjct: 114 YFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ- 172
Query: 146 VTLWYRPPDVLFGAKLYTT-SIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
+ ++PP++ G ++ +D+WSAG + P F G D + ++F+ +G
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP-FEG----DNIYKLFENIGK 227
Query: 205 PTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
G +P P L+ DLL+ +L P +R S
Sbjct: 228 -------GSYAIP--------------GDCGPPLS----DLLKGMLEYEPAKRFSIRQIR 262
Query: 265 SHIYF 269
H +F
Sbjct: 263 QHSWF 267
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 29/214 (13%)
Query: 30 SALREICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQDLKKYF--DSLNGEI 81
A EI +L+ L+ ++ +V+H + T + FE +L + + G
Sbjct: 139 QAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-F 197
Query: 82 DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE--LKLADFGLARAFGIPVK 139
L +V+ F + +L+ L H ++H DLKP+N+L+ + G +K+ DFG +
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS-------- 249
Query: 140 CYSAEVV-----TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQ 194
CY + V + +YR P+V+ GA+ Y IDMWS GCI AEL G PL PG D DQ
Sbjct: 250 CYEHQRVYXXIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELL-TGYPLLPGEDEGDQ 307
Query: 195 LKRIFKLLGTPTEDTWPGMNLLPDF---KPFPMY 225
L + +LLG P + +F K +P Y
Sbjct: 308 LACMIELLGMPXQKLLDASKRAKNFVSXKGYPRY 341
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 40/263 (15%)
Query: 12 TALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLK 71
AL L+ + REI LK L+H +I++LYDV+ + + +V E+ +L
Sbjct: 37 VALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELF 96
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
Y + D + F Q++ + +CH ++HRDLKP+NLL++ N +K+ADFGL+
Sbjct: 97 DYIVE-KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155
Query: 132 RAFG----IPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFP 187
+ C S Y P+V+ G +D+WS G + + GR F
Sbjct: 156 NIMTDGNFLKTSCGSPN-----YAAPEVINGKLYAGPEVDVWSCGIVLYVML-VGRLPFD 209
Query: 188 GSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQ 247
D+ + +FK + + + ++PDF L+ + L++
Sbjct: 210 ----DEFIPNLFKKVNS-------CVYVMPDF------------------LSPGAQSLIR 240
Query: 248 RLLVCNPVQRMSAEDAMSHIYFS 270
R++V +P+QR++ ++ +F+
Sbjct: 241 RMIVADPMQRITIQEIRRDPWFN 263
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 135/275 (49%), Gaps = 43/275 (15%)
Query: 7 DRTPNTALAIKGTHLVGNEGVPSSA----LREICLLKELKHKNIVRLYDVLHSEKKLTLV 62
D+ + AIK ++ V +S+ L E+ +LK L H NI++LYD ++ LV
Sbjct: 58 DKVTHVERAIK---IIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114
Query: 63 FEHCDQDLKKYFDSLNGEIDLDIVKS--FMYQLLRGLAFCHSRNVLHRDLKPQNLLI--- 117
E C + + FD + + + V + + Q+L G+ + H N++HRDLKP+NLL+
Sbjct: 115 ME-CYKG-GELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK 172
Query: 118 NKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAE 177
K+ +K+ DFGL+ F K + T +Y P+VL K Y D+WS G I
Sbjct: 173 EKDALIKIVDFGLSAVFENQKKM-KERLGTAYYIAPEVL--RKKYDEKCDVWSIGVILFI 229
Query: 178 LANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPK 237
L AG P F G + L+++ K G T D+ P++K
Sbjct: 230 LL-AGYPPFGGQTDQEILRKVEK--GKYTFDS-------PEWK----------------N 263
Query: 238 LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
++ +DL++++L + +R+SA+ A+ H + ++
Sbjct: 264 VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 108/251 (43%), Gaps = 52/251 (20%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKS---- 88
+EI ++K L H NI+RLY+ + LV E C GE+ +V
Sbjct: 55 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCT----------GGELFERVVHKRVFR 104
Query: 89 ------FMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVK 139
M +L +A+CH NV HRDLKP+N L + + LKL DFGLA F P K
Sbjct: 105 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-PGK 163
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
+V T +Y P VL G LY D WSAG + L P +D + LK
Sbjct: 164 MMRTKVGTPYYVSPQVLEG--LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 221
Query: 200 KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
P +D W +N+ P + L++RLL +P QR++
Sbjct: 222 GTFTFPEKD-W--LNVSP-----------------------QAESLIRRLLTKSPKQRIT 255
Query: 260 AEDAMSHIYFS 270
+ A+ H +F
Sbjct: 256 SLQALEHEWFE 266
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 108/251 (43%), Gaps = 52/251 (20%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKS---- 88
+EI ++K L H NI+RLY+ + LV E C GE+ +V
Sbjct: 72 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCT----------GGELFERVVHKRVFR 121
Query: 89 ------FMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVK 139
M +L +A+CH NV HRDLKP+N L + + LKL DFGLA F P K
Sbjct: 122 ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-PGK 180
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
+V T +Y P VL G LY D WSAG + L P +D + LK
Sbjct: 181 MMRTKVGTPYYVSPQVLEG--LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 238
Query: 200 KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
P +D W +N+ P + L++RLL +P QR++
Sbjct: 239 GTFTFPEKD-W--LNVSP-----------------------QAESLIRRLLTKSPKQRIT 272
Query: 260 AEDAMSHIYFS 270
+ A+ H +F
Sbjct: 273 SLQALEHEWFE 283
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 53/274 (19%)
Query: 7 DRTPNTALAIKGTHLVGNEGVPSSA-LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
DR A+K + + +S LRE+ LLK+L H NI++L+++L +V E
Sbjct: 43 DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102
Query: 66 CDQDLKKYFDSLNGEIDLDIVKS----------FMYQLLRGLAFCHSRNVLHRDLKPQNL 115
GE+ +I+K + Q+ G+ + H N++HRDLKP+N+
Sbjct: 103 Y----------TGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENI 152
Query: 116 LI---NKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
L+ K+ ++K+ DFGL+ F K + T +Y P+VL G Y D+WSAG
Sbjct: 153 LLESKEKDCDIKIIDFGLSTCFQQNTKM-KDRIGTAYYIAPEVLRGT--YDEKCDVWSAG 209
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFS 232
I L +G P F G + D LKR+ +T LP ++
Sbjct: 210 VILYILL-SGTPPFYGKNEYDILKRV---------ETGKYAFDLPQWRT----------- 248
Query: 233 QVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
++ +DL++++L +P R++A + H
Sbjct: 249 -----ISDDAKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 53/274 (19%)
Query: 7 DRTPNTALAIKGTHLVGNEGVPSSA-LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
DR A+K + + +S LRE+ LLK+L H NI++L+++L +V E
Sbjct: 43 DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102
Query: 66 CDQDLKKYFDSLNGEIDLDIVKS----------FMYQLLRGLAFCHSRNVLHRDLKPQNL 115
GE+ +I+K + Q+ G+ + H N++HRDLKP+N+
Sbjct: 103 ----------YTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENI 152
Query: 116 LI---NKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
L+ K+ ++K+ DFGL+ F K + T +Y P+VL G Y D+WSAG
Sbjct: 153 LLESKEKDCDIKIIDFGLSTCFQQNTKM-KDRIGTAYYIAPEVLRGT--YDEKCDVWSAG 209
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFS 232
I L +G P F G + D LKR+ +T LP ++
Sbjct: 210 VILYILL-SGTPPFYGKNEYDILKRV---------ETGKYAFDLPQWRT----------- 248
Query: 233 QVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
++ +DL++++L +P R++A + H
Sbjct: 249 -----ISDDAKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 53/274 (19%)
Query: 7 DRTPNTALAIKGTHLVGNEGVPSSA-LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
DR A+K + + +S LRE+ LLK+L H NI++L+++L +V E
Sbjct: 43 DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102
Query: 66 CDQDLKKYFDSLNGEIDLDIVKS----------FMYQLLRGLAFCHSRNVLHRDLKPQNL 115
GE+ +I+K + Q+ G+ + H N++HRDLKP+N+
Sbjct: 103 ----------YTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENI 152
Query: 116 LI---NKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
L+ K+ ++K+ DFGL+ F K + T +Y P+VL G Y D+WSAG
Sbjct: 153 LLESKEKDCDIKIIDFGLSTCFQQNTKM-KDRIGTAYYIAPEVLRGT--YDEKCDVWSAG 209
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFS 232
I L +G P F G + D LKR+ +T LP ++
Sbjct: 210 VILYILL-SGTPPFYGKNEYDILKRV---------ETGKYAFDLPQWRT----------- 248
Query: 233 QVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
++ +DL++++L +P R++A + H
Sbjct: 249 -----ISDDAKDLIRKMLTFHPSLRITATQCLEH 277
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL--NGEIDLDIVKSF 89
RE+ ++K L H NIV+L++V+ +EK L LV E+ + FD L +G + ++
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAK 119
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVK----CYSAEV 145
Q++ + +CH + ++HRDLK +NLL++ + +K+ADFG + F + K C S
Sbjct: 120 FRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPP- 178
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
Y P++ G K +D+WS G I L + P F G ++ + +R+ +
Sbjct: 179 ----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLR 228
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 43/239 (17%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL--NGEIDLDIVKSF 89
RE+ ++K L H NIV+L++V+ +EK L LV E+ + FD L +G + ++
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAK 118
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVK----CYSAEV 145
Q++ + +CH + ++HRDLK +NLL++ + +K+ADFG + F K C S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP- 177
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
Y P++ G K +D+WS G I L + P F G ++ + +R+ +
Sbjct: 178 ----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLR----- 227
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
G +P + ++ +LL++ L+ NP +R + E M
Sbjct: 228 ------GKYRIPFY------------------MSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 112/235 (47%), Gaps = 35/235 (14%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL--NGEIDLDIVKSF 89
RE+ ++K L H NIV+L++V+ +EK L LV E+ + FD L +G + ++
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAK 118
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW 149
Q++ + +CH + ++HRDLK +NLL++ + +K+ADFG + F K A
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL-DAFCGAPP 177
Query: 150 YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDT 209
Y P++ G K +D+WS G I L + P F G ++ + +R+ +
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLR--------- 227
Query: 210 WPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
G +P + ++ +LL++ L+ NP +R + E M
Sbjct: 228 --GKYRIPFY------------------MSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 43/239 (17%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL--NGEIDLDIVKSF 89
RE+ ++K L H NIV+L++V+ +EK L LV E+ + FD L +G + ++
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAK 118
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVK----CYSAEV 145
Q++ + +CH + ++HRDLK +NLL++ + +K+ADFG + F K C S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP- 177
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
Y P++ G K +D+WS G I L + P F G ++ + +R+ +
Sbjct: 178 ----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLR----- 227
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
G +P + ++ +LL++ L+ NP +R + E M
Sbjct: 228 ------GKYRIPFY------------------MSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 43/239 (17%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL--NGEIDLDIVKSF 89
RE+ ++K L H NIV+L++V+ +EK L LV E+ + FD L +G + ++
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAK 118
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVK----CYSAEV 145
Q++ + +CH + ++HRDLK +NLL++ + +K+ADFG + F K C S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP- 177
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
Y P++ G K +D+WS G I L + P F G ++ + +R+ +
Sbjct: 178 ----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLR----- 227
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
G +P + ++ +LL++ L+ NP +R + E M
Sbjct: 228 ------GKYRIPFY------------------MSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 43/239 (17%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL--NGEIDLDIVKSF 89
RE+ ++K L H NIV+L++V+ +EK L LV E+ + FD L +G + ++
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAK 118
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVK----CYSAEV 145
Q++ + +CH + ++HRDLK +NLL++ + +K+ADFG + F K C S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPP- 177
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
Y P++ G K +D+WS G I L + P F G ++ + +R+ +
Sbjct: 178 ----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLR----- 227
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
G +P + ++ +LL++ L+ NP +R + E M
Sbjct: 228 ------GKYRIPFY------------------MSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 120/243 (49%), Gaps = 42/243 (17%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN-----GEIDLDIV 86
L E+ +LK+L H NI++LY+ ++ LV E + FD + E+D ++
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGG--ELFDEIILRQKFSEVDAAVI 126
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVKCYSA 143
M Q+L G + H N++HRDLKP+NLL+ +++ +K+ DFGL+ F + K
Sbjct: 127 ---MKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM-KE 182
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
+ T +Y P+VL K Y D+WS G I L G P F G + LKR+ K G
Sbjct: 183 RLGTAYYIAPEVL--RKKYDEKCDVWSCGVILYILL-CGYPPFGGQTDQEILKRVEK--G 237
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
+ D PD+ +++ + + L++ +L P +R+SAE+A
Sbjct: 238 KFSFDP-------PDW----------------TQVSDEAKQLVKLMLTYEPSKRISAEEA 274
Query: 264 MSH 266
++H
Sbjct: 275 LNH 277
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 43/239 (17%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL--NGEIDLDIVKSF 89
RE+ ++K L H NIV+L++V+ +EK L LV E+ + FD L +G + ++
Sbjct: 54 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGWMKEKEARAK 111
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVK----CYSAEV 145
Q++ + +CH + ++HRDLK +NLL++ + +K+ADFG + F K C S
Sbjct: 112 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP- 170
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
Y P++ G K +D+WS G I L + P F G ++ + +R+ +
Sbjct: 171 ----YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLR----- 220
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
G +P + ++ +LL++ L+ NP +R + E M
Sbjct: 221 ------GKYRIPFY------------------MSTDCENLLKKFLILNPSKRGTLEQIM 255
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 120/243 (49%), Gaps = 42/243 (17%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN-----GEIDLDIV 86
L E+ +LK+L H NI++LY+ ++ LV E + FD + E+D ++
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGG--ELFDEIILRQKFSEVDAAVI 109
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVKCYSA 143
M Q+L G + H N++HRDLKP+NLL+ +++ +K+ DFGL+ F + K
Sbjct: 110 ---MKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM-KE 165
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
+ T +Y P+VL K Y D+WS G I L G P F G + LKR+ K G
Sbjct: 166 RLGTAYYIAPEVL--RKKYDEKCDVWSCGVILYILL-CGYPPFGGQTDQEILKRVEK--G 220
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
+ D PD+ +++ + + L++ +L P +R+SAE+A
Sbjct: 221 KFSFDP-------PDW----------------TQVSDEAKQLVKLMLTYEPSKRISAEEA 257
Query: 264 MSH 266
++H
Sbjct: 258 LNH 260
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 3/159 (1%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEI-DLDIVKSFM 90
RE+ +L +KH NIV+ + L +V ++C+ DL K ++ G + D + +
Sbjct: 72 REVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF 131
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWY 150
Q+ L H R +LHRD+K QN+ + K+G ++L DFG+AR V+ A + T +Y
Sbjct: 132 VQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYY 191
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGS 189
P++ K Y D+W+ GC+ EL GS
Sbjct: 192 LSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAFEAGS 229
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 29 SSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK---KYFDSLNGEIDLD 84
+ ++EI LLK+L H N+++ Y + +L +V E D DL K+F I
Sbjct: 77 ADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER 136
Query: 85 IVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE 144
V + QL L HSR V+HRD+KP N+ I G +KL D GL R F +
Sbjct: 137 TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL 196
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
V T +Y P+ + Y D+WS GC+ E+A P +
Sbjct: 197 VGTPYYMSPERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFY 237
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 26 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 86 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 143
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 204 GELPWDQPSD 213
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 24 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 83
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 84 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 141
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 142 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 201
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 202 GELPWDQPSD 211
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 25 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 84
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 85 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 142
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 203 GELPWDQPSD 212
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 25 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 84
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 85 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 142
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 203 GELPWDQPSD 212
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 26 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 86 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 143
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 204 GELPWDQPSD 213
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 26 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 86 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 143
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 204 GELPWDQPSD 213
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 26 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 86 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 143
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 204 GELPWDQPSD 213
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 25 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 84
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 85 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 142
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 203 GELPWDQPSD 212
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 25 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 84
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 85 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 142
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 203 GELPWDQPSD 212
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 26 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 86 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 143
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 204 GELPWDQPSD 213
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 25 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 84
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 85 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 142
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 203 GELPWDQPSD 212
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 6/171 (3%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL--NGEIDLDIVKSF 89
RE+ + K L H NIV+L++V+ +EK L LV E+ + FD L +G ++
Sbjct: 61 FREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGG--EVFDYLVAHGRXKEKEARAK 118
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW 149
Q++ + +CH + ++HRDLK +NLL++ + +K+ADFG + F K A
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKL-DAFCGAPP 177
Query: 150 YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
Y P++ G K +D+WS G I L + P F G ++ + +R+ +
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLR 227
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 25 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 84
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 85 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 142
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 203 GELPWDQPSD 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 25 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 84
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 85 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 142
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 203 GELPWDQPSD 212
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 25 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 84
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 85 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 142
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 203 GELPWDQPSD 212
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 14/183 (7%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEID----L 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE+ L
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKG--SLLDFLKGEMGKYLRL 113
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF--GIPVKCY 141
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 173
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRI 198
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++R
Sbjct: 174 GAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 199 FKL 201
+++
Sbjct: 232 YRM 234
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEID----L 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE+ L
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKG--SLLDFLKGEMGKYLRL 113
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR I Y+
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTA 171
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 172 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 197 RIFKL 201
R +++
Sbjct: 230 RGYRM 234
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 26 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 86 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 143
Query: 123 LKLADFGLARAF--GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 204 GELPWDQPSD 213
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 25 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 84
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 85 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 142
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 203 GELPWDQPSD 212
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ K L H+N+V+ Y L E
Sbjct: 25 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 84
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 85 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 142
Query: 123 LKLADFGLARAF--GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 203 GELPWDQPSD 212
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 14/183 (7%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE----IDL 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE + L
Sbjct: 47 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIXIVTEYMSKG--SLLDFLKGETGKYLRL 103
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF--GIPVKCY 141
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR
Sbjct: 104 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 163
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRI 198
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++R
Sbjct: 164 GAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 221
Query: 199 FKL 201
+++
Sbjct: 222 YRM 224
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 111/250 (44%), Gaps = 50/250 (20%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY- 91
RE + + LKH NIVRL+D + E LVF DL GE+ DIV Y
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVF-----DL-----VTGGELFEDIVAREYYS 101
Query: 92 ---------QLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVK 139
Q+L + CH ++HRDLKP+NLL+ +K +KLADFGLA +
Sbjct: 102 EADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ 161
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
+ T Y P+VL Y +DMW+ G I L G P F D+ R++
Sbjct: 162 AWFGFAGTPGYLSPEVL-RKDPYGKPVDMWACGVILYILL-VGYPPF----WDEDQHRLY 215
Query: 200 KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+ + D PS + V P + +DL+ ++L NP +R++
Sbjct: 216 QQIKAGAYD-----------------FPSPEWDTVTP----EAKDLINKMLTINPAKRIT 254
Query: 260 AEDAMSHIYF 269
A +A+ H +
Sbjct: 255 ASEALKHPWI 264
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEID----L 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE+ L
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVMEYMSKGC--LLDFLKGEMGKYLRL 113
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR I Y+
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTA 171
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 172 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 197 RIFKL 201
R +++
Sbjct: 230 RGYRM 234
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 34 EICLLKELKHKNIVRLYDVL--HSEKKLTLVFEHCDQ-DLKKYFDSLNGE---IDLDIVK 87
E+ LL+ELKH NIVR YD + + L +V E+C+ DL E +D + V
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 88 SFMYQLLRGLAFCHSRN-----VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS 142
M QL L CH R+ VLHRDLKP N+ ++ +KL DFGLAR
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Query: 143 AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
A V T +Y P+ + Y D+WS GC+ EL
Sbjct: 175 AFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYEL 209
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 100/185 (54%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE----IDL 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ ++ D L GE + L
Sbjct: 54 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKG--SLLDFLKGETGKYLRL 110
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR I Y+
Sbjct: 111 PQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTA 168
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 169 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
Query: 197 RIFKL 201
R +++
Sbjct: 227 RGYRM 231
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 110/251 (43%), Gaps = 50/251 (19%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY- 91
RE + + LKH NIVRL+D + E L+F DL GE+ DIV Y
Sbjct: 70 REARICRLLKHPNIVRLHDSISEEGHHYLIF-----DL-----VTGGELFEDIVAREYYS 119
Query: 92 ---------QLLRGLAFCHSRNVLHRDLKPQNLLIN---KNGELKLADFGLARAFGIPVK 139
Q+L + CH V+HRDLKP+NLL+ K +KLADFGLA +
Sbjct: 120 EADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 179
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
+ T Y P+VL Y +D+W+ G I L P + D+ R++
Sbjct: 180 AWFGFAGTPGYLSPEVL-RKDPYGKPVDLWACGVILYILLVGYPPFW-----DEDQHRLY 233
Query: 200 KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+ + D PS + V P + +DL+ ++L NP +R++
Sbjct: 234 QQIKAGAYD-----------------FPSPEWDTVTP----EAKDLINKMLTINPSKRIT 272
Query: 260 AEDAMSHIYFS 270
A +A+ H + S
Sbjct: 273 AAEALKHPWIS 283
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEID----L 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE+ L
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG--SLLDFLKGEMGKYLRL 113
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR I Y+
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTA 171
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 172 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 197 RIFKL 201
R +++
Sbjct: 230 RGYRM 234
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE----IDL 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE + L
Sbjct: 306 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG--SLLDFLKGETGKYLRL 362
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR I Y+
Sbjct: 363 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTA 420
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 421 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 478
Query: 197 RIFKL 201
R +++
Sbjct: 479 RGYRM 483
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEID----L 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE+ L
Sbjct: 46 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG--SLLDFLKGEMGKYLRL 102
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR I Y+
Sbjct: 103 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTA 160
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 161 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 218
Query: 197 RIFKL 201
R +++
Sbjct: 219 RGYRM 223
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE----IDL 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE + L
Sbjct: 50 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG--SLLDFLKGETGKYLRL 106
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR I Y+
Sbjct: 107 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTA 164
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 165 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 222
Query: 197 RIFKL 201
R +++
Sbjct: 223 RGYRM 227
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 109/247 (44%), Gaps = 50/247 (20%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY- 91
RE + + LKH NIVRL+D + E LVF DL GE+ DIV Y
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVF-----DL-----VTGGELFEDIVAREYYS 101
Query: 92 ---------QLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVK 139
Q+L + CH ++HRDLKP+NLL+ +K +KLADFGLA +
Sbjct: 102 EADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ 161
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
+ T Y P+VL Y +DMW+ G I L P + D+ R++
Sbjct: 162 AWFGFAGTPGYLSPEVL-RKDPYGKPVDMWACGVILYILLVGYPPFW-----DEDQHRLY 215
Query: 200 KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+ + D PS + V P + +DL+ ++L NP +R++
Sbjct: 216 QQIKAGAYD-----------------FPSPEWDTVTP----EAKDLINKMLTINPAKRIT 254
Query: 260 AEDAMSH 266
A +A+ H
Sbjct: 255 ASEALKH 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEID----L 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE+ L
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVCEYMSKG--SLLDFLKGEMGKYLRL 113
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR I Y+
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTA 171
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 172 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 197 RIFKL 201
R +++
Sbjct: 230 RGYRM 234
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE----IDL 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE + L
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG--SLLDFLKGETGKYLRL 279
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR I Y+
Sbjct: 280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTA 337
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 338 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 197 RIFKL 201
R +++
Sbjct: 396 RGYRM 400
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 91/181 (50%), Gaps = 11/181 (6%)
Query: 25 EGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLD 84
E EI LLK L H NI++L+DV +K LV E + + F+ + D
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGG--ELFEQIINRHKFD 144
Query: 85 I--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLI-NKNG--ELKLADFGLARAFGIPVK 139
+ M Q+L G+ + H N++HRD+KP+N+L+ NKN +K+ DFGL+ F K
Sbjct: 145 ECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK 204
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
+ T +Y P+VL K Y D+WS G I L G P F G + D +K++
Sbjct: 205 L-RDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILL-CGYPPFGGQNDQDIIKKVE 260
Query: 200 K 200
K
Sbjct: 261 K 261
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEID----L 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE+ L
Sbjct: 48 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG--SLLDFLKGEMGKYLRL 104
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR I Y+
Sbjct: 105 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTA 162
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 163 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 220
Query: 197 RIFKL 201
R +++
Sbjct: 221 RGYRM 225
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE----IDL 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE + L
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG--SLLDFLKGETGKYLRL 279
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR I Y+
Sbjct: 280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTA 337
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 338 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 197 RIFKL 201
R +++
Sbjct: 396 RGYRM 400
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEID----L 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE+ L
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGC--LLDFLKGEMGKYLRL 113
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR I Y+
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTA 171
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 172 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 197 RIFKL 201
R +++
Sbjct: 230 RGYRM 234
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 14/183 (7%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE----IDL 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ ++ D L GE + L
Sbjct: 54 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKG--SLLDFLKGETGKYLRL 110
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF--GIPVKCY 141
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR
Sbjct: 111 PQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQ 170
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRI 198
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++R
Sbjct: 171 GAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 228
Query: 199 FKL 201
+++
Sbjct: 229 YRM 231
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE----IDL 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE + L
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVGEYMSKG--SLLDFLKGETGKYLRL 279
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR I Y+
Sbjct: 280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTA 337
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 338 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 197 RIFKL 201
R +++
Sbjct: 396 RGYRM 400
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 99/185 (53%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEID----L 83
P + L+E ++K+++H+ +V+LY V+ SE+ + +V E+ + D L GE+ L
Sbjct: 57 PEAFLQEAQVMKKIRHEKLVQLYAVV-SEEPIYIVTEYMSKG--SLLDFLKGEMGKYLRL 113
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL+ N+L+ +N K+ADFGLAR I Y+
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTA 171
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 172 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 197 RIFKL 201
R +++
Sbjct: 230 RGYRM 234
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 18/185 (9%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEID----L 83
P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ + D L GE+ L
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG--SLLDFLKGEMGKYLRL 113
Query: 84 DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS- 142
+ Q+ G+A+ N +HRDL N+L+ +N K+ADFGLAR I Y+
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARL--IEDNEYTA 171
Query: 143 ---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLK 196
A+ W P L+G +T D+WS G + EL GR +PG +V DQ++
Sbjct: 172 RQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 197 RIFKL 201
R +++
Sbjct: 230 RGYRM 234
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 118/256 (46%), Gaps = 35/256 (13%)
Query: 12 TALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DL 70
AL + + EGV REI + L H NI+RLY+ + +++ L+ E+ + +L
Sbjct: 51 VALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL 110
Query: 71 KKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGL 130
K + D + M +L L +CH + V+HRD+KP+NLL+ GELK+ADFG
Sbjct: 111 YKELQK-SCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGW 169
Query: 131 ARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSD 190
+ P TL Y PP+++ G +++ +D+W G + EL G P F +
Sbjct: 170 --SVHAPSLRRKTMCGTLDYLPPEMIEG-RMHNEKVDLWCIGVLCYELL-VGNPPFESAS 225
Query: 191 VDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLL 250
++ +RI K+ D K FP P+ +DL+ +LL
Sbjct: 226 HNETYRRIVKV----------------DLK-FPASVPT------------GAQDLISKLL 256
Query: 251 VCNPVQRMSAEDAMSH 266
NP +R+ +H
Sbjct: 257 RHNPSERLPLAQVSAH 272
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EIC+ L H+N+V+ Y L E
Sbjct: 26 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLE 85
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 86 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 143
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 204 GELPWDQPSD 213
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 111/251 (44%), Gaps = 50/251 (19%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY- 91
RE + + LKH NIVRL+D + E L+F DL GE+ DIV Y
Sbjct: 59 REARICRLLKHPNIVRLHDSISEEGHHYLIF-----DL-----VTGGELFEDIVAREYYS 108
Query: 92 ---------QLLRGLAFCHSRNVLHRDLKPQNLLIN---KNGELKLADFGLARAFGIPVK 139
Q+L + CH V+HR+LKP+NLL+ K +KLADFGLA +
Sbjct: 109 EADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ 168
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
+ T Y P+VL Y +D+W+ G I L G P F D+ R++
Sbjct: 169 AWFGFAGTPGYLSPEVL-RKDPYGKPVDLWACGVILYILL-VGYPPF----WDEDQHRLY 222
Query: 200 KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+ + D PS + V P + +DL+ ++L NP +R++
Sbjct: 223 QQIKAGAYD-----------------FPSPEWDTVTP----EAKDLINKMLTINPSKRIT 261
Query: 260 AEDAMSHIYFS 270
A +A+ H + S
Sbjct: 262 AAEALKHPWIS 272
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 34 EICLLKELKHKNIVRLYDVL--HSEKKLTLVFEHCDQ-DLKKYFDSLNGE---IDLDIVK 87
E+ LL+ELKH NIVR YD + + L +V E+C+ DL E +D + V
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 88 SFMYQLLRGLAFCHSRN-----VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS 142
M QL L CH R+ VLHRDLKP N+ ++ +KL DFGLAR
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Query: 143 AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
V T +Y P+ + Y D+WS GC+ EL
Sbjct: 175 TFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYEL 209
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 20/202 (9%)
Query: 11 NTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDL 70
T +AIK T GN P + L+E ++K+L+H+ +V+LY V+ SE+ + +V E+ +
Sbjct: 209 TTRVAIK-TLKPGNMS-PEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKG- 264
Query: 71 KKYFDSLNGEID----LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLA 126
D L GE+ L + Q+ G+A+ N +HRDL+ N+L+ +N K+A
Sbjct: 265 -SLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 323
Query: 127 DFGLARAFGIPVKCYS----AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG 182
DFGL R I Y+ A+ W P L+G +T D+WS G + EL G
Sbjct: 324 DFGLGRL--IEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKG 379
Query: 183 RPLFPG---SDVDDQLKRIFKL 201
R +PG +V DQ++R +++
Sbjct: 380 RVPYPGMVNREVLDQVERGYRM 401
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 110/245 (44%), Gaps = 51/245 (20%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY- 91
RE + ++L+H NIVRL+D + E LVF+ GE+ DIV Y
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLV----------TGGELFEDIVAREFYS 103
Query: 92 ---------QLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVK 139
Q+L +A+CHS ++HR+LKP+NLL+ K +KLADFGLA +
Sbjct: 104 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSE 162
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
+ T Y P+VL Y+ +D+W+ G I L G P F D+ R++
Sbjct: 163 AWHGFAGTPGYLSPEVL-KKDPYSKPVDIWACGVILYILL-VGYPPF----WDEDQHRLY 216
Query: 200 KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+ D +PS + V P + + L+ +L NP +R++
Sbjct: 217 AQIKAGAYD-----------------YPSPEWDTVTP----EAKSLIDSMLTVNPKKRIT 255
Query: 260 AEDAM 264
A+ A+
Sbjct: 256 ADQAL 260
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 43/243 (17%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL--NGEIDLDIVKSFM 90
REI LK +H +I++LY V+ + + +V E+ + FD + NG +D +
Sbjct: 65 REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGG--ELFDYICKNGRLDEKESRRLF 122
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFG----IPVKCYSAEVV 146
Q+L G+ +CH V+HRDLKP+N+L++ + K+ADFGL+ + C S
Sbjct: 123 QQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPN-- 180
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
Y P+V+ G +D+WS+G I L P DD + +FK +
Sbjct: 181 ---YAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF-----DDDHVPTLFKKICD-- 230
Query: 207 EDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
G+ P + + P + + LL+ +L +P++R + +D H
Sbjct: 231 -----GIFYTPQY--------------LNPSVIS----LLKHMLQVDPMKRATIKDIREH 267
Query: 267 IYF 269
+F
Sbjct: 268 EWF 270
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 66 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 123
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 124 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 184 KQARANSFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 241
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 242 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 272
Query: 257 RMSAED 262
R+ E+
Sbjct: 273 RLGCEE 278
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 16/185 (8%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIV 86
P + L E L+K+L+H+ +VRLY V+ +++ + ++ E+ + L + + +G I L I
Sbjct: 62 PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSG-IKLTIN 119
Query: 87 K--SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS-- 142
K Q+ G+AF RN +HRDL+ N+L++ K+ADFGLAR I Y+
Sbjct: 120 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAR 177
Query: 143 --AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKR 197
A+ W P + +G +T D+WS G + E+ GR +PG +V L+R
Sbjct: 178 EGAKFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 235
Query: 198 IFKLL 202
++++
Sbjct: 236 GYRMV 240
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 110/245 (44%), Gaps = 51/245 (20%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY- 91
RE + ++L+H NIVRL+D + E LVF+ GE+ DIV Y
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLV----------TGGELFEDIVAREFYS 126
Query: 92 ---------QLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVK 139
Q+L +A+CHS ++HR+LKP+NLL+ K +KLADFGLA +
Sbjct: 127 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSE 185
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
+ T Y P+VL Y+ +D+W+ G I L G P F D+ R++
Sbjct: 186 AWHGFAGTPGYLSPEVL-KKDPYSKPVDIWACGVILYILL-VGYPPF----WDEDQHRLY 239
Query: 200 KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+ D +PS + V P + + L+ +L NP +R++
Sbjct: 240 AQIKAGAYD-----------------YPSPEWDTVTP----EAKSLIDSMLTVNPKKRIT 278
Query: 260 AEDAM 264
A+ A+
Sbjct: 279 ADQAL 283
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 69 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 126
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 127 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F +
Sbjct: 187 KQARANXFVGTAQYVSPELL-TEKSAXKSSDLWALGCIIYQLV-AGLPPFRAGNEGLIFA 244
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 245 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 275
Query: 257 RMSAED 262
R+ E+
Sbjct: 276 RLGCEE 281
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 69 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 126
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 127 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 187 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 244
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 245 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 275
Query: 257 RMSAED 262
R+ E+
Sbjct: 276 RLGCEE 281
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 38/265 (14%)
Query: 14 LAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-----Q 68
+A K HL + + +RE+ +L E IV Y +S+ ++++ EH D Q
Sbjct: 34 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 93
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN-VLHRDLKPQNLLINKNGELKLAD 127
LKK G I I+ +++GL + ++ ++HRD+KP N+L+N GE+KL D
Sbjct: 94 VLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 148
Query: 128 FGLARAFGIPVKCYSAEVV-TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
FG++ G + + V T Y P+ L G Y+ D+WS G E+A P+
Sbjct: 149 FGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIP 204
Query: 187 PGSDVDDQLK--RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRD 244
P +D IF+LL + P + PS FS + +D
Sbjct: 205 PPDAKEDSRPPMAIFELLDYIVNEPPPKL-------------PSGVFS-------LEFQD 244
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYF 269
+ + L+ NP +R + M H +
Sbjct: 245 FVNKCLIKNPAERADLKQLMVHAFI 269
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Query: 7 DRTPNTALAIKGTHLVGNE-GVPSSALREICLLKELKHKNIVRLYDVLHSEKK------L 59
DR +AIK ++ N+ + A E+ LL+ + + Y ++H ++ L
Sbjct: 75 DRVEQEWVAIK---IIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131
Query: 60 TLVFEHCDQDLKKYFDSLNGE-IDLDIVKSFMYQLLRGLAFCHS--RNVLHRDLKPQNLL 116
LVFE +L + N + L++ + F Q+ L F + +++H DLKP+N+L
Sbjct: 132 CLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENIL 191
Query: 117 I--NKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCI 174
+ K +K+ DFG + G + + + +YR P+VL G Y +IDMWS GCI
Sbjct: 192 LCNPKRSAIKIVDFGSSCQLGQRI---YQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCI 247
Query: 175 FAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
E+ + G PLF G++ DQ+ +I ++LG P
Sbjct: 248 LVEM-HTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
P + L E L+K+L+H+ +VRLY V+ E + + L + + +G I L I K
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINK 110
Query: 88 --SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF--GIPVKCYSA 143
Q+ G+AF RN +HRDL+ N+L++ K+ADFGLAR A
Sbjct: 111 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGA 170
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRIFK 200
+ W P + +G +T D+WS G + E+ GR +PG +V L+R ++
Sbjct: 171 KFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 228
Query: 201 LL 202
++
Sbjct: 229 MV 230
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 34 EICLLKELKHKNIVRLYDVL--HSEKKLTLVFEHCDQ-DLKKYFDSLNGE---IDLDIVK 87
E+ LL+ELKH NIVR YD + + L +V E+C+ DL E +D + V
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 88 SFMYQLLRGLAFCHSRN-----VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS 142
M QL L CH R+ VLHRDLKP N+ ++ +KL DFGLAR
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK 174
Query: 143 AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
V T +Y P+ + Y D+WS GC+ EL
Sbjct: 175 EFVGTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYEL 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EI + K L H+N+V+ Y L E
Sbjct: 26 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLE 85
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 86 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 143
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 204 GELPWDQPSD 213
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 66 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 123
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 124 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 183
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 184 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 241
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 242 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 272
Query: 257 RMSAED 262
R+ E+
Sbjct: 273 RLGCEE 278
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 67 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 124
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 125 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 185 KQARANAFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 242
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 243 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 273
Query: 257 RMSAED 262
R+ E+
Sbjct: 274 RLGCEE 279
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 67 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 124
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 125 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 185 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 242
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 243 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 273
Query: 257 RMSAED 262
R+ E+
Sbjct: 274 RLGCEE 279
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 67 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 124
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 125 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 185 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 242
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 243 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 273
Query: 257 RMSAED 262
R+ E+
Sbjct: 274 RLGCEE 279
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIV 86
P + L E L+K+L+H+ +VRLY V+ +++ + ++ E+ + L + + +G I L I
Sbjct: 58 PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSG-IKLTIN 115
Query: 87 K--SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF--GIPVKCYS 142
K Q+ G+AF RN +HRDL+ N+L++ K+ADFGLAR
Sbjct: 116 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 175
Query: 143 AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRIF 199
A+ W P + +G +T D+WS G + E+ GR +PG +V L+R +
Sbjct: 176 AKFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY 233
Query: 200 KLL 202
+++
Sbjct: 234 RMV 236
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 109/247 (44%), Gaps = 50/247 (20%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY- 91
RE + + LKH NIVRL+D + E LVF DL GE+ DIV Y
Sbjct: 52 REARICRLLKHSNIVRLHDSISEEGFHYLVF-----DL-----VTGGELFEDIVAREYYS 101
Query: 92 ---------QLLRGLAFCHSRNVLHRDLKPQNLLIN---KNGELKLADFGLARAFGIPVK 139
Q+L + CH V+HRDLKP+NLL+ K +KLADFGLA +
Sbjct: 102 EADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ 161
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
+ T Y P+VL + Y +D+W+ G I L P + D+ +++
Sbjct: 162 AWFGFAGTPGYLSPEVL-RKEAYGKPVDIWACGVILYILLVGYPPFW-----DEDQHKLY 215
Query: 200 KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+ + D PS + V P + ++L+ ++L NP +R++
Sbjct: 216 QQIKAGAYD-----------------FPSPEWDTVTP----EAKNLINQMLTINPAKRIT 254
Query: 260 AEDAMSH 266
A +A+ H
Sbjct: 255 AHEALKH 261
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 111/245 (45%), Gaps = 51/245 (20%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY- 91
RE + ++L+H NIVRL+D + E LVF DL GE+ DIV Y
Sbjct: 53 REARICRKLQHPNIVRLHDSIQEESFHYLVF-----DL-----VTGGELFEDIVAREFYS 102
Query: 92 ---------QLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVK 139
Q+L +A+CHS ++HR+LKP+NLL+ K +KLADFGLA +
Sbjct: 103 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSE 161
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
+ T Y P+VL Y+ +D+W+ G I L G P F D+ R++
Sbjct: 162 AWHGFAGTPGYLSPEVL-KKDPYSKPVDIWACGVILYILL-VGYPPF----WDEDQHRLY 215
Query: 200 KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+ D +PS + V P + + L+ +L NP +R++
Sbjct: 216 AQIKAGAYD-----------------YPSPEWDTVTP----EAKSLIDSMLTVNPKKRIT 254
Query: 260 AEDAM 264
A+ A+
Sbjct: 255 ADQAL 259
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 70 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 127
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 128 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 188 KQARANSFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 245
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 246 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 276
Query: 257 RMSAED 262
R+ E+
Sbjct: 277 RLGCEE 282
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 67 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 124
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 125 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 184
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 185 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 242
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 243 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 273
Query: 257 RMSAED 262
R+ E+
Sbjct: 274 RLGCEE 279
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EI + K L H+N+V+ Y L E
Sbjct: 25 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLE 84
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 85 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 142
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 203 GELPWDQPSD 212
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 69 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 126
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 127 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 187 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 244
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 245 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 275
Query: 257 RMSAED 262
R+ E+
Sbjct: 276 RLGCEE 281
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + L KY +
Sbjct: 69 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKI- 126
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 127 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K + S D+W+ GCI +L AG P F + +
Sbjct: 187 KQARANSFVGTAQYVSPELL-TEKSASKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 244
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 245 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 275
Query: 257 RMSAED 262
R+ E+
Sbjct: 276 RLGCEE 281
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 70 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 127
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 128 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 187
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 188 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 245
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 246 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 276
Query: 257 RMSAED 262
R+ E+
Sbjct: 277 RLGCEE 282
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 112/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 69 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 126
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 127 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F +
Sbjct: 187 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEGLIFA 244
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 245 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 275
Query: 257 RMSAED 262
R+ E+
Sbjct: 276 RLGCEE 281
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 14/184 (7%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
P + L E L+K+L+H+ +VRLY V+ E + + L + + +G I L I K
Sbjct: 58 PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINK 116
Query: 88 --SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS--- 142
Q+ G+AF RN +HRDL+ N+L++ K+ADFGLAR I Y+
Sbjct: 117 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTARE 174
Query: 143 -AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRI 198
A+ W P + +G +T D+WS G + E+ GR +PG +V L+R
Sbjct: 175 GAKFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 232
Query: 199 FKLL 202
++++
Sbjct: 233 YRMV 236
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
V+R A+A+K + P + +EI + K L H+N+V+ Y L E
Sbjct: 25 AVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLE 84
Query: 65 HCDQDLKKYFDSLNGEIDLDI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
+C + FD + +I + + F +QL+ G+ + H + HRD+KP+NLL+++
Sbjct: 85 YCSGG--ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 142
Query: 123 LKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
LK++DFGLA F + + TL Y P++L + + +D+WS G + +
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 181 AGRPLFPGSD 190
P SD
Sbjct: 203 GELPWDQPSD 212
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 111/245 (45%), Gaps = 51/245 (20%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY- 91
RE + ++L+H NIVRL+D + E LVF DL GE+ DIV Y
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVF-----DL-----VTGGELFEDIVAREFYS 103
Query: 92 ---------QLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVK 139
Q+L +A+CHS ++HR+LKP+NLL+ K +KLADFGLA +
Sbjct: 104 EADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSE 162
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
+ T Y P+VL Y+ +D+W+ G I L G P F D+ R++
Sbjct: 163 AWHGFAGTPGYLSPEVL-KKDPYSKPVDIWACGVILYILL-VGYPPF----WDEDQHRLY 216
Query: 200 KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+ D +PS + V P + + L+ +L NP +R++
Sbjct: 217 AQIKAGAYD-----------------YPSPEWDTVTP----EAKSLIDSMLTVNPKKRIT 255
Query: 260 AEDAM 264
A+ A+
Sbjct: 256 ADQAL 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 16/185 (8%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIV 86
P + L E L+K+L+H+ +VRLY V+ +++ + ++ E+ + L + + +G I L I
Sbjct: 57 PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSG-IKLTIN 114
Query: 87 K--SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS-- 142
K Q+ G+AF RN +HRDL+ N+L++ K+ADFGLAR I Y+
Sbjct: 115 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAR 172
Query: 143 --AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKR 197
A+ W P + +G +T D+WS G + E+ GR +PG +V L+R
Sbjct: 173 EGAKFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 230
Query: 198 IFKLL 202
++++
Sbjct: 231 GYRMV 235
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 44 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 101
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 102 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 161
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 162 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 219
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 220 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 250
Query: 257 RMSAED 262
R+ E+
Sbjct: 251 RLGCEE 256
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 117/264 (44%), Gaps = 40/264 (15%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD----- 67
+A K HL + + +RE+ +L E IV Y +S+ ++++ EH D
Sbjct: 52 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD 111
Query: 68 QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN-VLHRDLKPQNLLINKNGELKLA 126
Q LKK G I I+ +++GL + ++ ++HRD+KP N+L+N GE+KL
Sbjct: 112 QVLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 166
Query: 127 DFGLARAFGIPVKCYSAEVV-TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPL 185
DFG++ G + + V T Y P+ L G Y+ D+WS G E+A P+
Sbjct: 167 DFGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPI 222
Query: 186 FPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDL 245
GS IF+LL + P + PS FS + +D
Sbjct: 223 GSGSGS----MAIFELLDYIVNEPPPKL-------------PSGVFS-------LEFQDF 258
Query: 246 LQRLLVCNPVQRMSAEDAMSHIYF 269
+ + L+ NP +R + M H +
Sbjct: 259 VNKCLIKNPAERADLKQLMVHAFI 282
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
P + L E L+K+L+H+ +VRLY V+ E + + L + + +G I L I K
Sbjct: 61 PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINK 119
Query: 88 --SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF--GIPVKCYSA 143
Q+ G+AF RN +HRDL+ N+L++ K+ADFGLAR A
Sbjct: 120 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 179
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRIFK 200
+ W P + +G +T D+WS G + E+ GR +PG +V L+R ++
Sbjct: 180 KFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 237
Query: 201 LL 202
++
Sbjct: 238 MV 239
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
P + L E L+K+L+H+ +VRLY V+ E + + L + + +G I L I K
Sbjct: 60 PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINK 118
Query: 88 --SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF--GIPVKCYSA 143
Q+ G+AF RN +HRDL+ N+L++ K+ADFGLAR A
Sbjct: 119 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 178
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRIFK 200
+ W P + +G +T D+WS G + E+ GR +PG +V L+R ++
Sbjct: 179 KFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 236
Query: 201 LL 202
++
Sbjct: 237 MV 238
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 33/267 (12%)
Query: 7 DRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC 66
D+ N +A+K ++ E + + REI + L+H NIVR +V+ + L +V E+
Sbjct: 40 DKQANELVAVK--YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 97
Query: 67 DQDLKKYFDSL--NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN--GE 122
+ F+ + G D + F QL+ G+++ H+ V HRDLK +N L++ +
Sbjct: 98 SGG--ELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPR 155
Query: 123 LKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG 182
LK+ADFG ++A + + SA V T Y P+VL + D+WS G +
Sbjct: 156 LKIADFGYSKASVLHSQPKSA-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 214
Query: 183 RPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKG 242
P + + K I ++L +PD + ++P+
Sbjct: 215 YPFEDPEEPKNFRKTIHRILNV--------QYAIPD------------YVHISPEC---- 250
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYF 269
R L+ R+ V +P +R+S + +H +F
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 14/184 (7%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
P + L E L+K+L+H+ +VRLY V+ E + + L + + +G I L I K
Sbjct: 47 PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINK 105
Query: 88 --SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS--- 142
Q+ G+AF RN +HRDL+ N+L++ K+ADFGLAR I Y+
Sbjct: 106 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTARE 163
Query: 143 -AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRI 198
A+ W P + +G +T D+WS G + E+ GR +PG +V L+R
Sbjct: 164 GAKFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 221
Query: 199 FKLL 202
++++
Sbjct: 222 YRMV 225
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 69 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 126
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 127 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 187 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 244
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 245 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 275
Query: 257 RMSAED 262
R+ E+
Sbjct: 276 RLGCEE 281
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 45 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 102
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 103 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 163 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 220
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 221 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 251
Query: 257 RMSAED 262
R+ E+
Sbjct: 252 RLGCEE 257
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 51 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 108
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 109 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 168
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 169 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 226
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 227 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 257
Query: 257 RMSAED 262
R+ E+
Sbjct: 258 RLGCEE 263
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
P + L E L+K+L+H+ +VRLY V+ E + + L + + +G I L I K
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINK 110
Query: 88 --SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF--GIPVKCYSA 143
Q+ G+AF RN +HRDL+ N+L++ K+ADFGLAR A
Sbjct: 111 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRIFK 200
+ W P + +G +T D+WS G + E+ GR +PG +V L+R ++
Sbjct: 171 KFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 228
Query: 201 LL 202
++
Sbjct: 229 MV 230
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 46 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 103
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 104 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 163
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 164 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 221
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 222 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 252
Query: 257 RMSAED 262
R+ E+
Sbjct: 253 RLGCEE 258
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Query: 7 DRTPNTALAIKGTHLVGNE-GVPSSALREICLLKELKHKNIVRLYDVLHSEKK------L 59
DR +AIK ++ N+ + A E+ LL+ + + Y ++H ++ L
Sbjct: 56 DRVEQEWVAIK---IIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 112
Query: 60 TLVFEHCDQDLKKYFDSLNGE-IDLDIVKSFMYQLLRGLAFCHS--RNVLHRDLKPQNLL 116
LVFE +L + N + L++ + F Q+ L F + +++H DLKP+N+L
Sbjct: 113 CLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENIL 172
Query: 117 I--NKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCI 174
+ K +K+ DFG + G + + + +YR P+VL G Y +IDMWS GCI
Sbjct: 173 LCNPKRSAIKIVDFGSSCQLGQRI---YQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCI 228
Query: 175 FAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
E+ + G PLF G++ DQ+ +I ++LG P
Sbjct: 229 LVEM-HTGEPLFSGANEVDQMNKIVEVLGIP 258
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 47 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 104
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 105 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 164
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 165 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 222
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 223 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 253
Query: 257 RMSAED 262
R+ E+
Sbjct: 254 RLGCEE 259
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 20/211 (9%)
Query: 7 DRTPNTALAIKGTHLVGNE-GVPSSALREICLLKELKHKNIVRLYDVLHSEKK------L 59
DR +AIK ++ N+ + A E+ LL+ + + Y ++H ++ L
Sbjct: 75 DRVEQEWVAIK---IIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131
Query: 60 TLVFEHCDQDLKKYFDSLNGE-IDLDIVKSFMYQLLRGLAFCHS--RNVLHRDLKPQNLL 116
LVFE +L + N + L++ + F Q+ L F + +++H DLKP+N+L
Sbjct: 132 CLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENIL 191
Query: 117 I--NKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCI 174
+ K +K+ DFG + G + + + +YR P+VL G Y +IDMWS GCI
Sbjct: 192 LCNPKRXAIKIVDFGSSCQLGQRI---YQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCI 247
Query: 175 FAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
E+ + G PLF G++ DQ+ +I ++LG P
Sbjct: 248 LVEM-HTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 14/184 (7%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
P + L E L+K+L+H+ +VRLY V+ E + + L + + +G I L I K
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINK 110
Query: 88 --SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS--- 142
Q+ G+AF RN +HRDL+ N+L++ K+ADFGLAR I Y+
Sbjct: 111 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTARE 168
Query: 143 -AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRI 198
A+ W P + +G +T D+WS G + E+ GR +PG +V L+R
Sbjct: 169 GAKFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226
Query: 199 FKLL 202
++++
Sbjct: 227 YRMV 230
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
P + L E L+K+L+H+ +VRLY V+ E + + L + + +G I L I K
Sbjct: 54 PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINK 112
Query: 88 --SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF--GIPVKCYSA 143
Q+ G+AF RN +HRDL+ N+L++ K+ADFGLAR A
Sbjct: 113 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 172
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRIFK 200
+ W P + +G +T D+WS G + E+ GR +PG +V L+R ++
Sbjct: 173 KFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 230
Query: 201 LL 202
++
Sbjct: 231 MV 232
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
P + L E L+K+L+H+ +VRLY V+ E + + L + + +G I L I K
Sbjct: 53 PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINK 111
Query: 88 --SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF--GIPVKCYSA 143
Q+ G+AF RN +HRDL+ N+L++ K+ADFGLAR A
Sbjct: 112 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 171
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRIFK 200
+ W P + +G +T D+WS G + E+ GR +PG +V L+R ++
Sbjct: 172 KFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 229
Query: 201 LL 202
++
Sbjct: 230 MV 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 72 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI- 129
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 130 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 189
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 190 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 247
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P FP K RDL+++LLV + +
Sbjct: 248 KIIKL-----EYDFPAAF-------FP-----------------KARDLVEKLLVLDATK 278
Query: 257 RMSAED 262
R+ E+
Sbjct: 279 RLGCEE 284
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 20 HLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLN 78
H++ VP RE ++ L H V+LY ++KL + + +L KY +
Sbjct: 74 HIIKENKVPY-VTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKI- 131
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 138
G D + + +++ L + H + ++HRDLKP+N+L+N++ +++ DFG A+
Sbjct: 132 GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 191
Query: 139 KCYSAE--VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K A V T Y P++L K S D+W+ GCI +L AG P F + +
Sbjct: 192 KQARANXFVGTAQYVSPELL-TEKSACKSSDLWALGCIIYQLV-AGLPPFRAGNEYLIFQ 249
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
+I KL E +P K FP K RDL+++LLV + +
Sbjct: 250 KIIKL-----EYDFPE-------KFFP-----------------KARDLVEKLLVLDATK 280
Query: 257 RMSAED 262
R+ E+
Sbjct: 281 RLGCEE 286
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
P + L E L+K+L+H+ +VRLY V+ E + + L + + +G I L I K
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG-IKLTINK 110
Query: 88 --SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF--GIPVKCYSA 143
Q+ G+AF RN +HRDL+ N+L++ K+ADFGLAR A
Sbjct: 111 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRIFK 200
+ W P + +G +T D+WS G + E+ GR +PG +V L+R ++
Sbjct: 171 KFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 228
Query: 201 LL 202
++
Sbjct: 229 MV 230
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 122/267 (45%), Gaps = 33/267 (12%)
Query: 7 DRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC 66
D+ N +A+K ++ E + ++ REI + L+H NIVR +V+ + L +V E+
Sbjct: 40 DKQSNELVAVK--YIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 97
Query: 67 DQDLKKYFDSL--NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN--GE 122
+ F+ + G D + F QL+ G+++CH+ V HRDLK +N L++ +
Sbjct: 98 SG--GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPR 155
Query: 123 LKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG 182
LK+ DFG +++ + + S V T Y P+VL + D+WS G +
Sbjct: 156 LKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 214
Query: 183 RPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKG 242
P + + K I ++L +PD + ++P+
Sbjct: 215 YPFEDPEEPKNFRKTIHRILNV--------QYAIPD------------YVHISPEC---- 250
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYF 269
R L+ R+ V +P +R+S + +H +F
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 5/158 (3%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMY 91
RE+ +L H+NIV + DV + LV E+ + L +Y +S +G + +D +F
Sbjct: 60 REVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES-HGPLSVDTAINFTN 118
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q+L G+ H ++HRD+KPQN+LI+ N LK+ DFG+A+A + V+ T+ Y
Sbjct: 119 QILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQY 178
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG 188
P+ G + D++S G + E+ G P F G
Sbjct: 179 FSPEQAKG-EATDECTDIYSIGIVLYEML-VGEPPFNG 214
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 99/185 (53%), Gaps = 16/185 (8%)
Query: 28 PSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIV 86
P + L E L+K+L+H+ +VRLY V+ +++ + ++ E+ + L + + +G I L I
Sbjct: 48 PDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSG-IKLTIN 105
Query: 87 K--SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS-- 142
K Q+ G+AF RN +HR+L+ N+L++ K+ADFGLAR I Y+
Sbjct: 106 KLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARL--IEDNEYTAR 163
Query: 143 --AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKR 197
A+ W P + +G +T D+WS G + E+ GR +PG +V L+R
Sbjct: 164 EGAKFPIKWTAPEAINYGT--FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 221
Query: 198 IFKLL 202
++++
Sbjct: 222 GYRMV 226
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 117/263 (44%), Gaps = 44/263 (16%)
Query: 14 LAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-----Q 68
+A K HL + + +RE+ +L E IV Y +S+ ++++ EH D Q
Sbjct: 37 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 96
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN-VLHRDLKPQNLLINKNGELKLAD 127
LKK G I I+ +++GL + ++ ++HRD+KP N+L+N GE+KL D
Sbjct: 97 VLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 151
Query: 128 FGLARAFGIPVKCYSAEVV-TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
FG++ G + + E V T Y P+ L G Y+ D+WS G E+A P
Sbjct: 152 FGVS---GQLIDEMANEFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPRP 207
Query: 187 PGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLL 246
P + IF+LL + P + PS FS + +D +
Sbjct: 208 PMA--------IFELLDYIVNEPPPKL-------------PSAVFS-------LEFQDFV 239
Query: 247 QRLLVCNPVQRMSAEDAMSHIYF 269
+ L+ NP +R + M H +
Sbjct: 240 NKCLIKNPAERADLKQLMVHAFI 262
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 8 RTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD 67
R +A K HL + + +RE+ +L E IV Y +S+ ++++ EH D
Sbjct: 38 RPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 97
Query: 68 QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN-VLHRDLKPQNLLINKNGELKLA 126
I +I+ +LRGLA+ ++ ++HRD+KP N+L+N GE+KL
Sbjct: 98 GGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLC 157
Query: 127 DFGLARAFGIPVKCYSAEVV-TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPL 185
DFG++ G + + V T Y P+ L G Y+ D+WS G ELA GR
Sbjct: 158 DFGVS---GQLIDSMANSFVGTRSYMAPERLQGTH-YSVQSDIWSMGLSLVELA-VGRYP 212
Query: 186 FPGSDVDDQLKRIFKLLGTPTEDTWPG 212
P D K + + G P D G
Sbjct: 213 IPPPDA----KELEAIFGRPVVDGEEG 235
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 33/267 (12%)
Query: 7 DRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC 66
D+ N +A+K ++ E + + REI + L+H NIVR +V+ + L +V E+
Sbjct: 39 DKQSNELVAVK--YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 96
Query: 67 DQDLKKYFDSL--NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN--GE 122
+ F+ + G D + F QL+ G+++CH+ V HRDLK +N L++ +
Sbjct: 97 SG--GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPR 154
Query: 123 LKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG 182
LK+ DFG +++ + + S V T Y P+VL + D+WS G +
Sbjct: 155 LKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 213
Query: 183 RPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKG 242
P + + K I ++L +PD + ++P+
Sbjct: 214 YPFEDPEEPKNFRKTIHRILNV--------QYAIPD------------YVHISPEC---- 249
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYF 269
R L+ R+ V +P +R+S + +H +F
Sbjct: 250 RHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 11 NTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD- 69
NT +AIK L P S L E ++K+LKH +V+LY V+ SE+ + +V E+ ++
Sbjct: 33 NTKVAIK--TLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVV-SEEPIYIVTEYMNKGS 89
Query: 70 -LKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADF 128
L D + L + Q+ G+A+ N +HRDL+ N+L+ K+ADF
Sbjct: 90 LLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADF 149
Query: 129 GLARAF--GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
GLAR A+ W P L+G +T D+WS G + EL GR +
Sbjct: 150 GLARLIEDNEXTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELVTKGRVPY 207
Query: 187 PG---SDVDDQLKRIFKL 201
PG +V +Q++R +++
Sbjct: 208 PGMNNREVLEQVERGYRM 225
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
E+ ++++ +H N+V +Y ++L ++ E S ++ + + + +
Sbjct: 92 EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-QVRLNEEQIATVCEAV 150
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
L+ LA+ H++ V+HRD+K ++L+ +G +KL+DFG V V T ++ P
Sbjct: 151 LQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAP 210
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGM 213
+V+ LY T +D+WS G + E+ + P F S V M
Sbjct: 211 EVI-SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ-------------------AM 250
Query: 214 NLLPDFKPFPMYHPSMSFS-QVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
L D P P + S +V+P L RD L+R+LV +P +R +A++ + H +
Sbjct: 251 KRLRDSPP-----PKLKNSHKVSPVL----RDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 30/277 (10%)
Query: 14 LAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-----Q 68
+A K HL + + +RE+ +L E IV Y +S+ ++++ EH D Q
Sbjct: 61 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 120
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN-VLHRDLKPQNLLINKNGELKLAD 127
LKK G I I+ +++GL + ++ ++HRD+KP N+L+N GE+KL D
Sbjct: 121 VLKKA-----GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 175
Query: 128 FGLARAFGIPVKCYSAEVV-TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
FG++ G + + V T Y P+ L G Y+ D+WS G E+A P+
Sbjct: 176 FGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIP 231
Query: 187 PGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPM-YHPSMSF--------SQVAPK 237
P + +L ++ G E F M P M+ ++ PK
Sbjct: 232 PPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPK 291
Query: 238 LTA-----KGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
L + + +D + + L+ NP +R + M H +
Sbjct: 292 LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 328
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 37/243 (15%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGE---IDLDIVKSF 89
EI +LK L H NI+++++V + +V E C+ +L + S + V
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINK---NGELKLADFGLARAFGIPVKCYSAEVV 146
M Q++ LA+ HS++V+H+DLKP+N+L + +K+ DFGLA F +A
Sbjct: 130 MKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGT 189
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
L Y P+V + T D+WSAG + L P F G+ +++ ++
Sbjct: 190 AL-YMAPEVF--KRDVTFKCDIWSAGVVMYFLLTGCLP-FTGTSLEEVQQKA-------- 237
Query: 207 EDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
T+ N + +P LT + DLL+++L +P +R SA + H
Sbjct: 238 --TYKEPNYAVECRP----------------LTPQAVDLLKQMLTKDPERRPSAAQVLHH 279
Query: 267 IYF 269
+F
Sbjct: 280 EWF 282
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 30/277 (10%)
Query: 14 LAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-----Q 68
+A K HL + + +RE+ +L E IV Y +S+ ++++ EH D Q
Sbjct: 34 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 93
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN-VLHRDLKPQNLLINKNGELKLAD 127
LKK G I I+ +++GL + ++ ++HRD+KP N+L+N GE+KL D
Sbjct: 94 VLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 148
Query: 128 FGLARAFGIPVKCYSAEVV-TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
FG++ G + + V T Y P+ L G Y+ D+WS G E+A P+
Sbjct: 149 FGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIP 204
Query: 187 PGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPM-YHPSMSF--------SQVAPK 237
P + +L ++ G E + M P M+ ++ PK
Sbjct: 205 PPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPK 264
Query: 238 LTA-----KGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
L + + +D + + L+ NP +R + M H +
Sbjct: 265 LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 30/277 (10%)
Query: 14 LAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-----Q 68
+A K HL + + +RE+ +L E IV Y +S+ ++++ EH D Q
Sbjct: 96 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 155
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN-VLHRDLKPQNLLINKNGELKLAD 127
LKK G I I+ +++GL + ++ ++HRD+KP N+L+N GE+KL D
Sbjct: 156 VLKKA-----GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 210
Query: 128 FGLARAFGIPVKCYSAEVV-TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
FG++ G + + V T Y P+ L G Y+ D+WS G E+A P+
Sbjct: 211 FGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIP 266
Query: 187 PGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPM-YHPSMSF--------SQVAPK 237
P + +L ++ G E + M P M+ ++ PK
Sbjct: 267 PPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPK 326
Query: 238 LTA-----KGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
L + + +D + + L+ NP +R + M H +
Sbjct: 327 LPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 363
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 30/277 (10%)
Query: 14 LAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-----Q 68
+A K HL + + +RE+ +L E IV Y +S+ ++++ EH D Q
Sbjct: 34 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 93
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN-VLHRDLKPQNLLINKNGELKLAD 127
LKK G I I+ +++GL + ++ ++HRD+KP N+L+N GE+KL D
Sbjct: 94 VLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD 148
Query: 128 FGLARAFGIPVKCYSAEVV-TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
FG++ G + + V T Y P+ L G Y+ D+WS G E+A P+
Sbjct: 149 FGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIP 204
Query: 187 PGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPM-YHPSMSF--------SQVAPK 237
P + +L ++ G E + M P M+ ++ PK
Sbjct: 205 PPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPK 264
Query: 238 LTA-----KGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
L + + +D + + L+ NP +R + M H +
Sbjct: 265 LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 30/278 (10%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD----- 67
+A K HL + + +RE+ +L E IV Y +S+ ++++ EH D
Sbjct: 33 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD 92
Query: 68 QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN-VLHRDLKPQNLLINKNGELKLA 126
Q LKK G I I+ +++GL + ++ ++HRD+KP N+L+N GE+KL
Sbjct: 93 QVLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 147
Query: 127 DFGLARAFGIPVKCYSAEVV-TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPL 185
DFG++ G + + V T Y P+ L G Y+ D+WS G E+A P+
Sbjct: 148 DFGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPI 203
Query: 186 FPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPM-YHPSMSF--------SQVAP 236
P + +L ++ G E + M P M+ ++ P
Sbjct: 204 PPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPP 263
Query: 237 KLTA-----KGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
KL + + +D + + L+ NP +R + M H +
Sbjct: 264 KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 30/278 (10%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD----- 67
+A K HL + + +RE+ +L E IV Y +S+ ++++ EH D
Sbjct: 33 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD 92
Query: 68 QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN-VLHRDLKPQNLLINKNGELKLA 126
Q LKK G I I+ +++GL + ++ ++HRD+KP N+L+N GE+KL
Sbjct: 93 QVLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC 147
Query: 127 DFGLARAFGIPVKCYSAEVV-TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPL 185
DFG++ G + + V T Y P+ L G Y+ D+WS G E+A P+
Sbjct: 148 DFGVS---GQLIDSMANSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPI 203
Query: 186 FPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPM-YHPSMSF--------SQVAP 236
P + +L ++ G E + M P M+ ++ P
Sbjct: 204 PPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPP 263
Query: 237 KLTA-----KGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
KL + + +D + + L+ NP +R + M H +
Sbjct: 264 KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 10 PNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-Q 68
P A+AIK ++ V L+E +++ H +IV+L V+ +E + ++ E C
Sbjct: 37 PAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLG 95
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADF 128
+L+ + +DL + + YQL LA+ S+ +HRD+ +N+L++ N +KL DF
Sbjct: 96 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 155
Query: 129 GLARAF--GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
GL+R K ++ W P + F + +T++ D+W G E+ G F
Sbjct: 156 GLSRYMEDSTXXKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPF 213
Query: 187 PGSDVDDQLKRI 198
G +D + RI
Sbjct: 214 QGVKNNDVIGRI 225
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 13/179 (7%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDS-LNGEIDLDIVKSF 89
L E L+K L+H +VRLY V+ E+ + ++ E+ + L + S G++ L + F
Sbjct: 56 LEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF 115
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ G+A+ +N +HRDL+ N+L++++ K+ADFGLAR I Y+ A+
Sbjct: 116 SAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKF 173
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRIFKL 201
W P + FG +T D+WS G + E+ G+ +PG +DV L + +++
Sbjct: 174 PIKWTAPEAINFGC--FTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRM 230
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 116/290 (40%), Gaps = 73/290 (25%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-----QDLKKYFDSLNGEIDLDIVKS 88
E+ L+K+L H NI RLY+V E+ + LV E C L + D G+ +D+VK+
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKT 137
Query: 89 -----------------------------------FMYQLLRGLAFCHSRNVLHRDLKPQ 113
M Q+ L + H++ + HRD+KP+
Sbjct: 138 QICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPE 197
Query: 114 NLLI--NKNGELKLADFGLARAF----GIPVKCYSAEVVTLWYRPPDVLFGA-KLYTTSI 166
N L NK+ E+KL DFGL++ F + + T ++ P+VL + Y
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257
Query: 167 DMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYH 226
D WSAG + L P FPG + D + ++ K +
Sbjct: 258 DAWSAGVLLHLLLMGAVP-FPGVNDADTISQVLN-------------------KKLCFEN 297
Query: 227 PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDLNVAI 276
P+ + L+ RDLL LL N +R A A+ H + S + I
Sbjct: 298 PNYNV------LSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKI 341
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 10 PNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-Q 68
P A+AIK ++ V L+E +++ H +IV+L V+ +E + ++ E C
Sbjct: 37 PAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLG 95
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADF 128
+L+ + +DL + + YQL LA+ S+ +HRD+ +N+L++ N +KL DF
Sbjct: 96 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 155
Query: 129 GLARAF--GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
GL+R K ++ W P + F + +T++ D+W G E+ G F
Sbjct: 156 GLSRYMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPF 213
Query: 187 PGSDVDDQLKRI 198
G +D + RI
Sbjct: 214 QGVKNNDVIGRI 225
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 10 PNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-Q 68
P A+AIK ++ V L+E +++ H +IV+L V+ +E + ++ E C
Sbjct: 65 PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLG 123
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADF 128
+L+ + +DL + + YQL LA+ S+ +HRD+ +N+L++ N +KL DF
Sbjct: 124 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 183
Query: 129 GLARAF--GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
GL+R K ++ W P + F + +T++ D+W G E+ G F
Sbjct: 184 GLSRYMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPF 241
Query: 187 PGSDVDDQLKRI 198
G +D + RI
Sbjct: 242 QGVKNNDVIGRI 253
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 35/259 (13%)
Query: 21 LVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD--QDLKKYFDSLN 78
+ +E + +EI + L+H +V L+D + ++ +++E + +K D N
Sbjct: 191 MTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN 250
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLIN--KNGELKLADFGLARAFGI 136
++ D +M Q+ +GL H N +H DLKP+N++ ++ ELKL DFGL A
Sbjct: 251 -KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT-AHLD 308
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKL-YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQL 195
P + T + P+V G + Y T DMWS G + L + P G + DD+
Sbjct: 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYT--DMWSVGVLSYILLSGLSPF--GGENDDET 364
Query: 196 KRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
R K +D+ +FS + + G+D +++LL+ +P
Sbjct: 365 LRNVKSCDWNMDDS--------------------AFSGI----SEDGKDFIRKLLLADPN 400
Query: 256 QRMSAEDAMSHIYFSDLNV 274
RM+ A+ H + + N
Sbjct: 401 TRMTIHQALEHPWLTPGNA 419
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 35/259 (13%)
Query: 21 LVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD--QDLKKYFDSLN 78
+ +E + +EI + L+H +V L+D + ++ +++E + +K D N
Sbjct: 85 MTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN 144
Query: 79 GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLIN--KNGELKLADFGLARAFGI 136
++ D +M Q+ +GL H N +H DLKP+N++ ++ ELKL DFGL A
Sbjct: 145 -KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT-AHLD 202
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKL-YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQL 195
P + T + P+V G + Y T DMWS G + L + P G + DD+
Sbjct: 203 PKQSVKVTTGTAEFAAPEVAEGKPVGYYT--DMWSVGVLSYILLSGLSPF--GGENDDET 258
Query: 196 KRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
R K +D+ +FS ++ G+D +++LL+ +P
Sbjct: 259 LRNVKSCDWNMDDS--------------------AFSGIS----EDGKDFIRKLLLADPN 294
Query: 256 QRMSAEDAMSHIYFSDLNV 274
RM+ A+ H + + N
Sbjct: 295 TRMTIHQALEHPWLTPGNA 313
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 10 PNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-Q 68
P A+AIK ++ V L+E +++ H +IV+L V+ +E + ++ E C
Sbjct: 42 PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLG 100
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADF 128
+L+ + +DL + + YQL LA+ S+ +HRD+ +N+L++ N +KL DF
Sbjct: 101 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 160
Query: 129 GLARAF--GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
GL+R K ++ W P + F + +T++ D+W G E+ G F
Sbjct: 161 GLSRYMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPF 218
Query: 187 PGSDVDDQLKRI 198
G +D + RI
Sbjct: 219 QGVKNNDVIGRI 230
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 116/248 (46%), Gaps = 39/248 (15%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-----DLKKYFDSLNGEIDLDIVK 87
RE + LKH +IV L + S+ L +VFE D ++ K D+ G + + V
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA--GFVYSEAVA 132
Query: 88 S-FMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVKCYSA 143
S +M Q+L L +CH N++HRD+KP+N+L+ + +KL DFG+A G
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGG 192
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
V T + P+V+ + Y +D+W G I L + P + + R+F+ +
Sbjct: 193 RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTKE------RLFEGI- 244
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
+ +K P +S S +DL++R+L+ +P +R++ +A
Sbjct: 245 -----------IKGKYKMNPRQWSHISES---------AKDLVRRMLMLDPAERITVYEA 284
Query: 264 MSHIYFSD 271
++H + +
Sbjct: 285 LNHPWLKE 292
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 10 PNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-Q 68
P A+AIK ++ V L+E +++ H +IV+L V+ +E + ++ E C
Sbjct: 39 PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLG 97
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADF 128
+L+ + +DL + + YQL LA+ S+ +HRD+ +N+L++ N +KL DF
Sbjct: 98 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 157
Query: 129 GLARAF--GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
GL+R K ++ W P + F + +T++ D+W G E+ G F
Sbjct: 158 GLSRYMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPF 215
Query: 187 PGSDVDDQLKRI 198
G +D + RI
Sbjct: 216 QGVKNNDVIGRI 227
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 10 PNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-Q 68
P A+AIK ++ V L+E +++ H +IV+L V+ +E + ++ E C
Sbjct: 37 PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLG 95
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADF 128
+L+ + +DL + + YQL LA+ S+ +HRD+ +N+L++ N +KL DF
Sbjct: 96 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 155
Query: 129 GLARAF--GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
GL+R K ++ W P + F + +T++ D+W G E+ G F
Sbjct: 156 GLSRYMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPF 213
Query: 187 PGSDVDDQLKRI 198
G +D + RI
Sbjct: 214 QGVKNNDVIGRI 225
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 10 PNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-Q 68
P A+AIK ++ V L+E +++ H +IV+L V+ +E + ++ E C
Sbjct: 34 PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLG 92
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADF 128
+L+ + +DL + + YQL LA+ S+ +HRD+ +N+L++ N +KL DF
Sbjct: 93 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 152
Query: 129 GLARAF--GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
GL+R K ++ W P + F + +T++ D+W G E+ G F
Sbjct: 153 GLSRYMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPF 210
Query: 187 PGSDVDDQLKRI 198
G +D + RI
Sbjct: 211 QGVKNNDVIGRI 222
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 6/192 (3%)
Query: 10 PNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-Q 68
P A+AIK ++ V L+E +++ H +IV+L V+ +E + ++ E C
Sbjct: 40 PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLG 98
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADF 128
+L+ + +DL + + YQL LA+ S+ +HRD+ +N+L++ N +KL DF
Sbjct: 99 ELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 158
Query: 129 GLARAF--GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
GL+R K ++ W P + F + +T++ D+W G E+ G F
Sbjct: 159 GLSRYMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPF 216
Query: 187 PGSDVDDQLKRI 198
G +D + RI
Sbjct: 217 QGVKNNDVIGRI 228
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 6/193 (3%)
Query: 9 TPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD- 67
P A+AIK ++ V L+E +++ H +IV+L V+ +E + ++ E C
Sbjct: 416 NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTL 474
Query: 68 QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLAD 127
+L+ + +DL + + YQL LA+ S+ +HRD+ +N+L++ N +KL D
Sbjct: 475 GELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGD 534
Query: 128 FGLARAF--GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPL 185
FGL+R K ++ W P + F + +T++ D+W G E+ G
Sbjct: 535 FGLSRYMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKP 592
Query: 186 FPGSDVDDQLKRI 198
F G +D + RI
Sbjct: 593 FQGVKNNDVIGRI 605
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 33/267 (12%)
Query: 7 DRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC 66
D+ N +A+K ++ E + + REI + L+H NIVR +V+ + L +V E+
Sbjct: 40 DKQSNELVAVK--YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 97
Query: 67 DQDLKKYFDSL--NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN--GE 122
+ F+ + G D + F QL+ G+++CH+ V HRDLK +N L++ +
Sbjct: 98 SG--GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPR 155
Query: 123 LKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG 182
LK+ FG +++ + + S V T Y P+VL + D+WS G +
Sbjct: 156 LKICAFGYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 214
Query: 183 RPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKG 242
P + + K I ++L +PD + ++P+
Sbjct: 215 YPFEDPEEPKNFRKTIHRILNV--------QYAIPD------------YVHISPEC---- 250
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYF 269
R L+ R+ V +P +R+S + +H +F
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 109/247 (44%), Gaps = 50/247 (20%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY- 91
RE + + LKH NIVRL+D + E LVF DL GE+ DIV Y
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHYLVF-----DL-----VTGGELFEDIVAREYYS 128
Query: 92 ---------QLLRGLAFCHSRNVLHRDLKPQNLLIN---KNGELKLADFGLARAFGIPVK 139
Q+L + H +++HRDLKP+NLL+ K +KLADFGLA +
Sbjct: 129 EADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ 188
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
+ T Y P+VL Y +D+W+ G I L G P F D+ +++
Sbjct: 189 AWFGFAGTPGYLSPEVL-RKDPYGKPVDIWACGVILYILL-VGYPPF----WDEDQHKLY 242
Query: 200 KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
+ + D PS + V P + ++L+ ++L NP +R++
Sbjct: 243 QQIKAGAYD-----------------FPSPEWDTVTP----EAKNLINQMLTINPAKRIT 281
Query: 260 AEDAMSH 266
A+ A+ H
Sbjct: 282 ADQALKH 288
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 94/179 (52%), Gaps = 13/179 (7%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDS-LNGEIDLDIVKSF 89
L E L+K L+H +VRLY V+ E+ + ++ E + L + S G++ L + F
Sbjct: 55 LEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF 114
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ G+A+ +N +HRDL+ N+L++++ K+ADFGLAR I Y+ A+
Sbjct: 115 SAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKF 172
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRIFKL 201
W P + FG +T ++WS G + E+ G+ +PG +DV L + +++
Sbjct: 173 PIKWTAPEAINFGC--FTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRM 229
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 37/244 (15%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE----IDLDIVKSF 89
EI ++ +L H N+++LYD S+ + LV E+ D + FD + E +LD + F
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG--ELFDRIIDESYNLTELDTI-LF 192
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLL-INKNG-ELKLADFGLARAFGIPVKCYSAEVVT 147
M Q+ G+ H +LH DLKP+N+L +N++ ++K+ DFGLAR + P + T
Sbjct: 193 MKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYK-PREKLKVNFGT 251
Query: 148 LWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTE 207
+ P+V+ + DMWS G I L + P F G + + L I
Sbjct: 252 PEFLAPEVV-NYDFVSFPTDMWSVGVIAYMLLSGLSP-FLGDNDAETLNNILAC------ 303
Query: 208 DTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHI 267
W L D + ++ + ++ + +LL+ R+SA +A+ H
Sbjct: 304 -RWD----LED--------------EEFQDISEEAKEFISKLLIKEKSWRISASEALKHP 344
Query: 268 YFSD 271
+ SD
Sbjct: 345 WLSD 348
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLNGEI--DLDIVKSF 89
EI L K LKHKNIV+ + + E L S G + + + +
Sbjct: 68 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 127
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINK-NGELKLADFGLARAFGIPVKCYSAEVVTL 148
Q+L GL + H ++HRD+K N+LIN +G LK++DFG ++ C TL
Sbjct: 128 TKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTL 187
Query: 149 WYRPPDVL-FGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
Y P+++ G + Y + D+WS GC E+A P +
Sbjct: 188 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 226
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 83/144 (57%), Gaps = 5/144 (3%)
Query: 33 REICLLKELKHKNIVRLYDVLH--SEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFM 90
+EI +LK+L H N+V+L +VL +E L +VFE +Q +L + D + +
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQARFYF 143
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWY 150
L++G+ + H + ++HRD+KP NLL+ ++G +K+ADFG++ F S V T +
Sbjct: 144 QDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAF 203
Query: 151 RPPDVLFGA-KLYT-TSIDMWSAG 172
P+ L K+++ ++D+W+ G
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMG 227
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 118/250 (47%), Gaps = 46/250 (18%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLNGEIDL--DIVKSFM 90
E +L ++ H +V+L+ +E KL L+ + DL F L+ E+ + VK ++
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYL 136
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-AFGIPVKCYSAEVVTLW 149
+L GL HS +++RDLKP+N+L+++ G +KL DFGL++ A K YS T+
Sbjct: 137 AELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF-CGTVE 195
Query: 150 YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL-LGTPTED 208
Y P+V+ + ++ S D WS G + E+ P F G D + + I K LG
Sbjct: 196 YMAPEVV-NRQGHSHSADWWSYGVLMFEMLTGSLP-FQGKDRKETMTLILKAKLG----- 248
Query: 209 TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM-----SAEDA 263
+P F L+ + + LL+ L NP R+ AE+
Sbjct: 249 -------MPQF------------------LSTEAQSLLRALFKRNPANRLGSGPDGAEEI 283
Query: 264 MSHIYFSDLN 273
H+++S ++
Sbjct: 284 KRHVFYSTID 293
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLNGEI--DLDIVKSF 89
EI L K LKHKNIV+ + + E L S G + + + +
Sbjct: 54 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 113
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINK-NGELKLADFGLARAFGIPVKCYSAEVVTL 148
Q+L GL + H ++HRD+K N+LIN +G LK++DFG ++ C TL
Sbjct: 114 TKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTL 173
Query: 149 WYRPPDVL-FGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
Y P+++ G + Y + D+WS GC E+A P +
Sbjct: 174 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 212
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 10 PNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-Q 68
P A+AIK ++ V L+E +++ H +IV+L V+ +E + ++ E C
Sbjct: 37 PAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLG 95
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADF 128
+L+ + +DL + + YQL LA+ S+ +HRD+ +N+L++ +KL DF
Sbjct: 96 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDF 155
Query: 129 GLARAF--GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
GL+R K ++ W P + F + +T++ D+W G E+ G F
Sbjct: 156 GLSRYMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPF 213
Query: 187 PGSDVDDQLKRI 198
G +D + RI
Sbjct: 214 QGVKNNDVIGRI 225
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 33/267 (12%)
Query: 7 DRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC 66
D+ N +A+K ++ E + + REI + L+H NIVR +V+ + L +V E+
Sbjct: 40 DKQSNELVAVK--YIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYA 97
Query: 67 DQDLKKYFDSL--NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN--GE 122
+ F+ + G D + F QL+ G+++CH+ V HRDLK +N L++ +
Sbjct: 98 SG--GELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPR 155
Query: 123 LKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG 182
LK+ FG +++ + + V T Y P+VL + D+WS G +
Sbjct: 156 LKICAFGYSKSSVLHSQPKDT-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 214
Query: 183 RPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKG 242
P + + K I ++L +PD + ++P+
Sbjct: 215 YPFEDPEEPKNFRKTIHRILNV--------QYAIPD------------YVHISPEC---- 250
Query: 243 RDLLQRLLVCNPVQRMSAEDAMSHIYF 269
R L+ R+ V +P +R+S + +H +F
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 5 GVDR-TPN--TALAIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ PN T +A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 51 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 110
Query: 61 LVFEHCDQ-DLKKYFD-------------SLNGEIDL---DIVKSFMYQLLRGLAFCHSR 103
++ E+ + +L++Y S N E L D+V S YQ+ RG+ + S+
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV-SCAYQVARGMEYLASK 169
Query: 104 NVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
+HRDL +N+L+ ++ +K+ADFGLAR K + + W P+ LF +
Sbjct: 170 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWM-APEALFD-R 227
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 228 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLL 265
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 10 PNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-Q 68
P A+AIK ++ V L+E +++ H +IV+L V+ +E + ++ E C
Sbjct: 417 PAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLG 475
Query: 69 DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADF 128
+L+ + +DL + + YQL LA+ S+ +HRD+ +N+L++ +KL DF
Sbjct: 476 ELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDF 535
Query: 129 GLARAF--GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
GL+R K ++ W P + F + +T++ D+W G E+ G F
Sbjct: 536 GLSRYMEDSTYYKASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPF 593
Query: 187 PGSDVDDQLKRI 198
G +D + RI
Sbjct: 594 QGVKNNDVIGRI 605
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 116/250 (46%), Gaps = 46/250 (18%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLNGEIDL--DIVKSFM 90
E +L E+ H IV+L+ +E KL L+ + DL F L+ E+ + VK ++
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYL 132
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-AFGIPVKCYSAEVVTLW 149
+L L HS +++RDLKP+N+L+++ G +KL DFGL++ + K YS T+
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-CGTVE 191
Query: 150 YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL-LGTPTED 208
Y P+V+ + +T S D WS G + E+ P F G D + + I K LG
Sbjct: 192 YMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLP-FQGKDRKETMTMILKAKLG----- 244
Query: 209 TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA-----EDA 263
+P F L+ + + LL+ L NP R+ A E+
Sbjct: 245 -------MPQF------------------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEI 279
Query: 264 MSHIYFSDLN 273
H +FS ++
Sbjct: 280 KRHSFFSTID 289
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 5 GVDR-TPNTAL--AIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ P A+ A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 58 GIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 117
Query: 61 LVFEHCDQ-DLKKYFDS-----LNGEIDLDIVK----------SFMYQLLRGLAFCHSRN 104
++ E+ + +L++Y + + D++ V S YQL RG+ + S+
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFG---IPVKCYSAEVVTLWYRPPDVLFGAKL 161
+HRDL +N+L+ +N +K+ADFGLAR K + + W P+ LF ++
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWM-APEALFD-RV 235
Query: 162 YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLL 272
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 36/251 (14%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLD--IVKSFMY 91
EI +LK+L H I+++ + +E +V E + + FD + G L K + Y
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFY 121
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGE---LKLADFGLARAFGIPVKCYSAEVVTL 148
Q+L + + H ++HRDLKP+N+L++ E +K+ DFG ++ G T
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTP 180
Query: 149 WYRPPDVL--FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
Y P+VL G Y ++D WS G I + +G P F LK
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSEHRTQVSLK---------D 230
Query: 207 EDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ T N +P +V +++ K DL+++LLV +P R + E+A+ H
Sbjct: 231 QITSGKYNFIP---------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 267 IYFSDLNVAIK 277
+ D ++ K
Sbjct: 276 PWLQDEDMKRK 286
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 43/243 (17%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL--NGEIDLDIVKSFM 90
REI LK +H +I++LY V+ + +V E+ + FD + +G ++ +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGG--ELFDYICKHGRVEEMEARRLF 117
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFG----IPVKCYSAEVV 146
Q+L + +CH V+HRDLKP+N+L++ + K+ADFGL+ + C S
Sbjct: 118 QQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPN-- 175
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
Y P+V+ G +D+WS G I L P D+ + +FK +
Sbjct: 176 ---YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF-----DDEHVPTLFKKIRG-- 225
Query: 207 EDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
G+ +P++ L LL +L +P++R + +D H
Sbjct: 226 -----GVFYIPEY------------------LNRSVATLLMHMLQVDPLKRATIKDIREH 262
Query: 267 IYF 269
+F
Sbjct: 263 EWF 265
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 36/251 (14%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLD--IVKSFMY 91
EI +LK+L H I+++ + +E +V E + + FD + G L K + Y
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFY 121
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGE---LKLADFGLARAFGIPVKCYSAEVVTL 148
Q+L + + H ++HRDLKP+N+L++ E +K+ DFG ++ G T
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTP 180
Query: 149 WYRPPDVL--FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
Y P+VL G Y ++D WS G I + +G P F LK
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSEHRTQVSLK---------D 230
Query: 207 EDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ T N +P +V +++ K DL+++LLV +P R + E+A+ H
Sbjct: 231 QITSGKYNFIP---------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 267 IYFSDLNVAIK 277
+ D ++ K
Sbjct: 276 PWLQDEDMKRK 286
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 36/251 (14%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLD--IVKSFMY 91
EI +LK+L H I+++ + +E +V E + + FD + G L K + Y
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFY 127
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGE---LKLADFGLARAFGIPVKCYSAEVVTL 148
Q+L + + H ++HRDLKP+N+L++ E +K+ DFG ++ G T
Sbjct: 128 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTP 186
Query: 149 WYRPPDVL--FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
Y P+VL G Y ++D WS G I + +G P F LK
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSEHRTQVSLK---------D 236
Query: 207 EDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ T N +P +V +++ K DL+++LLV +P R + E+A+ H
Sbjct: 237 QITSGKYNFIP---------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 281
Query: 267 IYFSDLNVAIK 277
+ D ++ K
Sbjct: 282 PWLQDEDMKRK 292
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 5 GVDR-TPN--TALAIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ PN T +A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 44 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 103
Query: 61 LVFEHCDQ-DLKKYFD-------------SLNGEIDL---DIVKSFMYQLLRGLAFCHSR 103
++ E+ + +L++Y S N E L D+V S YQ+ RG+ + S+
Sbjct: 104 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV-SCAYQVARGMEYLASK 162
Query: 104 NVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
+HRDL +N+L+ ++ +K+ADFGLAR K + + W P+ LF +
Sbjct: 163 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFD-R 220
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 221 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLL 258
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 36/251 (14%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLD--IVKSFMY 91
EI +LK+L H I+++ + +E +V E + + FD + G L K + Y
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFY 120
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGE---LKLADFGLARAFGIPVKCYSAEVVTL 148
Q+L + + H ++HRDLKP+N+L++ E +K+ DFG ++ G T
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTP 179
Query: 149 WYRPPDVL--FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
Y P+VL G Y ++D WS G I + +G P F LK
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSEHRTQVSLK---------D 229
Query: 207 EDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ T N +P +V +++ K DL+++LLV +P R + E+A+ H
Sbjct: 230 QITSGKYNFIP---------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 274
Query: 267 IYFSDLNVAIK 277
+ D ++ K
Sbjct: 275 PWLQDEDMKRK 285
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 115/247 (46%), Gaps = 46/247 (18%)
Query: 37 LLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLNGEIDL--DIVKSFMYQL 93
+L E+ H IV+L+ +E KL L+ + DL F L+ E+ + VK ++ +L
Sbjct: 80 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAEL 136
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-AFGIPVKCYSAEVVTLWYRP 152
L HS +++RDLKP+N+L+++ G +KL DFGL++ + K YS T+ Y
Sbjct: 137 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-CGTVEYMA 195
Query: 153 PDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL-LGTPTEDTWP 211
P+V+ + +T S D WS G + E+ P F G D + + I K LG
Sbjct: 196 PEVV-NRRGHTQSADWWSFGVLMFEMLTGTLP-FQGKDRKETMTMILKAKLG-------- 245
Query: 212 GMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA-----EDAMSH 266
+P F L+ + + LL+ L NP R+ A E+ H
Sbjct: 246 ----MPQF------------------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 283
Query: 267 IYFSDLN 273
+FS ++
Sbjct: 284 SFFSTID 290
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 36/251 (14%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLD--IVKSFMY 91
EI +LK+L H I+++ + +E +V E + + FD + G L K + Y
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFY 121
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGE---LKLADFGLARAFGIPVKCYSAEVVTL 148
Q+L + + H ++HRDLKP+N+L++ E +K+ DFG ++ G T
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTP 180
Query: 149 WYRPPDVL--FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
Y P+VL G Y ++D WS G I + +G P F LK
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSEHRTQVSLK---------D 230
Query: 207 EDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ T N +P +V +++ K DL+++LLV +P R + E+A+ H
Sbjct: 231 QITSGKYNFIP---------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 267 IYFSDLNVAIK 277
+ D ++ K
Sbjct: 276 PWLQDEDMKRK 286
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEID-LDIVKSFM 90
L E ++K L+H +V+L+ V+ E + L + S G L + F
Sbjct: 225 LAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 284
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFG-IPVKCYSAEVVTLW 149
Q+ G+AF RN +HRDL+ N+L++ + K+ADFGLAR P+K W
Sbjct: 285 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK---------W 335
Query: 150 YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG 188
P + FG+ +T D+WS G + E+ GR +PG
Sbjct: 336 TAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPG 372
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 5 GVDR-TPN--TALAIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ PN T +A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 51 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 110
Query: 61 LVFEHCDQ-DLKKYFD-------------SLNGEIDL---DIVKSFMYQLLRGLAFCHSR 103
++ E+ + +L++Y S N E L D+V S YQ+ RG+ + S+
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV-SCAYQVARGMEYLASK 169
Query: 104 NVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
+HRDL +N+L+ ++ +K+ADFGLAR K + + W P+ LF +
Sbjct: 170 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFD-R 227
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 228 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLL 265
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 5 GVDR-TPNTAL--AIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ P A+ A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 58 GIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 117
Query: 61 LVFEHCDQ-DLKKYFDSLNG---EIDLDIVK------------SFMYQLLRGLAFCHSRN 104
++ E+ + +L++Y + E DI + S YQL RG+ + S+
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFG---IPVKCYSAEVVTLWYRPPDVLFGAKL 161
+HRDL +N+L+ +N +K+ADFGLAR K + + W P+ LF ++
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWM-APEALFD-RV 235
Query: 162 YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLL 272
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 5 GVDR-TPN--TALAIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ PN T +A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 92 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 151
Query: 61 LVFEHCDQ-DLKKYFD-------------SLNGEIDL---DIVKSFMYQLLRGLAFCHSR 103
++ E+ + +L++Y S N E L D+V S YQ+ RG+ + S+
Sbjct: 152 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV-SCAYQVARGMEYLASK 210
Query: 104 NVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
+HRDL +N+L+ ++ +K+ADFGLAR K + + W P+ LF +
Sbjct: 211 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFD-R 268
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 269 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLL 306
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 5 GVDR-TPN--TALAIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ PN T +A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 40 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 99
Query: 61 LVFEHCDQ-DLKKYFD-------------SLNGEIDL---DIVKSFMYQLLRGLAFCHSR 103
++ E+ + +L++Y S N E L D+V S YQ+ RG+ + S+
Sbjct: 100 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV-SCAYQVARGMEYLASK 158
Query: 104 NVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
+HRDL +N+L+ ++ +K+ADFGLAR K + + W P+ LF +
Sbjct: 159 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFD-R 216
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 217 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLL 254
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 34/247 (13%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLNGEIDLDIVKSFMYQ 92
EI LK L+H++I +LY VL + K+ +V E+C +L Y S + + + + Q
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQD-RLSEEETRVVFRQ 116
Query: 93 LLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGL-ARAFGIPVKCYSAEVVTLWYR 151
++ +A+ HS+ HRDLKP+NLL ++ +LKL DFGL A+ G +L Y
Sbjct: 117 IVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 152 PPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWP 211
P+++ G + D+WS G + L P DD + ++K + D
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPF-----DDDNVMALYKKIMRGKYD--- 228
Query: 212 GMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF-S 270
V L+ LLQ++L +P +R+S ++ ++H +
Sbjct: 229 ----------------------VPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
Query: 271 DLNVAIK 277
D N ++
Sbjct: 267 DYNYPVE 273
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 5 GVDR-TPN--TALAIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ PN T +A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 51 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 110
Query: 61 LVFEHCDQ-DLKKYFD-------------SLNGEIDL---DIVKSFMYQLLRGLAFCHSR 103
++ E+ + +L++Y S N E L D+V S YQ+ RG+ + S+
Sbjct: 111 VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV-SCAYQVARGMEYLASK 169
Query: 104 NVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
+HRDL +N+L+ ++ +K+ADFGLAR K + + W P+ LF +
Sbjct: 170 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFD-R 227
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 228 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLL 265
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 5 GVDR-TPN--TALAIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ PN T +A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 51 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 110
Query: 61 LVFEHCDQ-DLKKYFD-------------SLNGEIDL---DIVKSFMYQLLRGLAFCHSR 103
++ E+ + +L++Y S N E L D+V S YQ+ RG+ + S+
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV-SCAYQVARGMEYLASK 169
Query: 104 NVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
+HRDL +N+L+ ++ +K+ADFGLAR K + + W P+ LF +
Sbjct: 170 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFD-R 227
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 228 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLL 265
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 37/254 (14%)
Query: 25 EGVPSSALREICLLKELK-HKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL 83
E V + RE +L+++ H +I+ L D S + LVF+ + + FD L ++ L
Sbjct: 140 EEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKG--ELFDYLTEKVAL 197
Query: 84 DI--VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY 141
+S M LL ++F H+ N++HRDLKP+N+L++ N +++L+DFG + P +
Sbjct: 198 SEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE-PGEKL 256
Query: 142 SAEVVTLWYRPPDVLFGA-----KLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
T Y P++L + Y +D+W+ G I L AG P F L+
Sbjct: 257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL-AGSPPFWHRRQILMLR 315
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
I + + W ++ +DL+ RLL +P
Sbjct: 316 MIMEGQYQFSSPEWDDR-------------------------SSTVKDLISRLLQVDPEA 350
Query: 257 RMSAEDAMSHIYFS 270
R++AE A+ H +F
Sbjct: 351 RLTAEQALQHPFFE 364
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 36/251 (14%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLD--IVKSFMY 91
EI +LK+L H I+++ + +E +V E + + FD + G L K + Y
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFY 260
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGE---LKLADFGLARAFGIPVKCYSAEVVTL 148
Q+L + + H ++HRDLKP+N+L++ E +K+ DFG ++ G T
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTP 319
Query: 149 WYRPPDVL--FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
Y P+VL G Y ++D WS G I + +G P F LK
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSEHRTQVSLK---------D 369
Query: 207 EDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ T N +P +V +++ K DL+++LLV +P R + E+A+ H
Sbjct: 370 QITSGKYNFIP---------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 414
Query: 267 IYFSDLNVAIK 277
+ D ++ K
Sbjct: 415 PWLQDEDMKRK 425
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 5 GVDR-TPN--TALAIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ PN T +A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 43 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 102
Query: 61 LVFEHCDQ-DLKKYFD-------------SLNGEIDL---DIVKSFMYQLLRGLAFCHSR 103
++ E+ + +L++Y S N E L D+V S YQ+ RG+ + S+
Sbjct: 103 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV-SCAYQVARGMEYLASK 161
Query: 104 NVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
+HRDL +N+L+ ++ +K+ADFGLAR K + + W P+ LF +
Sbjct: 162 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFD-R 219
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 220 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLL 257
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 5 GVDR-TPNTAL--AIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ P A+ A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 104 GIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 163
Query: 61 LVFEHCDQ-DLKKYFDSLNG---EIDLDIVK------------SFMYQLLRGLAFCHSRN 104
++ E+ + +L++Y + E DI + S YQL RG+ + S+
Sbjct: 164 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 223
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFG---IPVKCYSAEVVTLWYRPPDVLFGAKL 161
+HRDL +N+L+ +N +K+ADFGLAR K + + W P+ LF ++
Sbjct: 224 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFD-RV 281
Query: 162 YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 282 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLL 318
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 36/251 (14%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLD--IVKSFMY 91
EI +LK+L H I+++ + +E +V E + + FD + G L K + Y
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFY 246
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGE---LKLADFGLARAFGIPVKCYSAEVVTL 148
Q+L + + H ++HRDLKP+N+L++ E +K+ DFG ++ G T
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLCGTP 305
Query: 149 WYRPPDVL--FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
Y P+VL G Y ++D WS G I + +G P F LK
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILF-ICLSGYPPFSEHRTQVSLK---------D 355
Query: 207 EDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ T N +P +V +++ K DL+++LLV +P R + E+A+ H
Sbjct: 356 QITSGKYNFIP---------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400
Query: 267 IYFSDLNVAIK 277
+ D ++ K
Sbjct: 401 PWLQDEDMKRK 411
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 31/222 (13%)
Query: 5 GVDR-TPN--TALAIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ PN T +A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 36 GLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 95
Query: 61 LVFEHCDQ-DLKKYFD-------------SLNGEIDL---DIVKSFMYQLLRGLAFCHSR 103
++ E+ + +L++Y S N E L D+V S YQ+ RG+ + S+
Sbjct: 96 VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV-SCAYQVARGMEYLASK 154
Query: 104 NVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEVVTLWYRPPDVLFGAK 160
+HRDL +N+L+ ++ +K+ADFGLAR K + + W P+ LF +
Sbjct: 155 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM-APEALFD-R 212
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 213 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----LFKLL 250
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 116/250 (46%), Gaps = 46/250 (18%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLNGEIDL--DIVKSFM 90
E +L E+ H IV+L+ +E KL L+ + DL F L+ E+ + VK ++
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYL 132
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-AFGIPVKCYSAEVVTLW 149
+L L HS +++RDLKP+N+L+++ G +KL DFGL++ + K YS T+
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-CGTVE 191
Query: 150 YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL-LGTPTED 208
Y P+V+ + +T S D WS G + E+ P F G D + + I K LG
Sbjct: 192 YMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLP-FQGKDRKETMTMILKAKLG----- 244
Query: 209 TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA-----EDA 263
+P F L+ + + LL+ L NP R+ A E+
Sbjct: 245 -------MPQF------------------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEI 279
Query: 264 MSHIYFSDLN 273
H +FS ++
Sbjct: 280 KRHSFFSTID 289
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 115/245 (46%), Gaps = 36/245 (14%)
Query: 32 LREICLLKELKH-KNIVRLYDVLHSEKKLTLVFEHC--DQDLKKYFDSLNGEIDLDIVKS 88
L EI +L+ K ++ L++V + ++ L+ E+ + L + + V
Sbjct: 76 LHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIR 135
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN---GELKLADFGLARAFGIPVKCYSAEV 145
+ Q+L G+ + H N++H DLKPQN+L++ G++K+ DFG++R G C E+
Sbjct: 136 LIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA--CELREI 193
Query: 146 V-TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
+ T Y P++L + TT+ DMW+ G I L P F G D + I ++
Sbjct: 194 MGTPEYLAPEILNYDPI-TTATDMWNIGIIAYMLLTHTSP-FVGEDNQETYLNISQVNVD 251
Query: 205 PTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
+E+T+ S SQ+A D +Q LLV NP +R +AE +
Sbjct: 252 YSEETFS------------------SVSQLAT-------DFIQSLLVKNPEKRPTAEICL 286
Query: 265 SHIYF 269
SH +
Sbjct: 287 SHSWL 291
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 5 GVDR-TPNTAL--AIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ P A+ A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 45 GIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 104
Query: 61 LVFEHCDQ-DLKKYFDSLNG---EIDLDIVK------------SFMYQLLRGLAFCHSRN 104
++ E+ + +L++Y + E DI + S YQL RG+ + S+
Sbjct: 105 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 164
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFG---IPVKCYSAEVVTLWYRPPDVLFGAKL 161
+HRDL +N+L+ +N +K+ADFGLAR K + + W P+ LF ++
Sbjct: 165 CIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFD-RV 222
Query: 162 YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 223 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLL 259
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 5 GVDR-TPNTAL--AIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ P A+ A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 58 GIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLY 117
Query: 61 LVFEHCDQ-DLKKYFDSLNG---EIDLDIVK------------SFMYQLLRGLAFCHSRN 104
++ E+ + +L++Y + E DI + S YQL RG+ + S+
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFG---IPVKCYSAEVVTLWYRPPDVLFGAKL 161
+HRDL +N+L+ +N +K+ADFGLAR K + + W P+ LF ++
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFD-RV 235
Query: 162 YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLL 272
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 5 GVDR-TPNTAL--AIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ P A+ A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 47 GIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 106
Query: 61 LVFEHCDQ-DLKKYFDSLNG---EIDLDIVK------------SFMYQLLRGLAFCHSRN 104
++ E+ + +L++Y + E DI + S YQL RG+ + S+
Sbjct: 107 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 166
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFG---IPVKCYSAEVVTLWYRPPDVLFGAKL 161
+HRDL +N+L+ +N +K+ADFGLAR K + + W P+ LF ++
Sbjct: 167 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFD-RV 224
Query: 162 YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 225 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLL 261
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 121/261 (46%), Gaps = 39/261 (14%)
Query: 29 SSALREICLLKEL-KHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN-GEIDLDIV 86
S A RE+ LL+E +H N++R + + + E C L++Y + + + L+ +
Sbjct: 62 SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPI 121
Query: 87 KSFMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELK--LADFGLARAFGIPVKCY 141
+ + Q GLA HS N++HRDLKP N+LI N +G++K ++DFGL + + +
Sbjct: 122 -TLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180
Query: 142 SAEV----VTLWYRPPDVLFGAKLYTT-SIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
S W P + K T ++D++SAGC+F + + G F G + Q
Sbjct: 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF-GKSLQRQAN 239
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LLG + D HP +A R+L+++++ +P +
Sbjct: 240 ---ILLGACSLDCL---------------HPEKHEDVIA-------RELIEKMIAMDPQK 274
Query: 257 RMSAEDAMSHIYFSDLNVAIK 277
R SA+ + H +F L ++
Sbjct: 275 RPSAKHVLKHPFFWSLEKQLQ 295
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 5 GVDR-TPNTAL--AIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ P A+ A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 50 GIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 109
Query: 61 LVFEHCDQ-DLKKYFDSLNG---EIDLDIVK------------SFMYQLLRGLAFCHSRN 104
++ E+ + +L++Y + E DI + S YQL RG+ + S+
Sbjct: 110 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 169
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFG---IPVKCYSAEVVTLWYRPPDVLFGAKL 161
+HRDL +N+L+ +N +K+ADFGLAR K + + W P+ LF ++
Sbjct: 170 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFD-RV 227
Query: 162 YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 228 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLL 264
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 5 GVDR-TPNTAL--AIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ P A+ A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 58 GIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 117
Query: 61 LVFEHCDQ-DLKKYFDSLNG---EIDLDIVK------------SFMYQLLRGLAFCHSRN 104
++ E+ + +L++Y + E DI + S YQL RG+ + S+
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFG---IPVKCYSAEVVTLWYRPPDVLFGAKL 161
+HRDL +N+L+ +N +K+ADFGLAR K + + W P+ LF ++
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFD-RV 235
Query: 162 YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLL 272
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 124/274 (45%), Gaps = 45/274 (16%)
Query: 7 DRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVF--- 63
D+ +AIK EG S EI +L ++KH NIV L D+ S L L+
Sbjct: 39 DKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 98
Query: 64 ---EHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLL---I 117
E D+ ++K F + E D ++Q+L + + H ++HRDLKP+NLL +
Sbjct: 99 SGGELFDRIVEKGFYT---ERD---ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL 152
Query: 118 NKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAE 177
+++ ++ ++DFGL++ P S T Y P+VL K Y+ ++D WS G I A
Sbjct: 153 DEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVI-AY 209
Query: 178 LANAGRPLFPGSDVDDQLKRIF-KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAP 236
+ G P F D+ ++F ++L E P + + D
Sbjct: 210 ILLCGYPPF----YDENDAKLFEQILKAEYEFDSPYWDDISD------------------ 247
Query: 237 KLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
+D ++ L+ +P +R + E A+ H + +
Sbjct: 248 ----SAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 5 GVDR-TPNTAL--AIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ P A+ A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 58 GIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLY 117
Query: 61 LVFEHCDQ-DLKKYFDSLNG---EIDLDIVK------------SFMYQLLRGLAFCHSRN 104
++ E+ + +L++Y + E DI + S YQL RG+ + S+
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFG---IPVKCYSAEVVTLWYRPPDVLFGAKL 161
+HRDL +N+L+ +N +K+ADFGLAR K + + W P+ LF ++
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFD-RV 235
Query: 162 YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLL 272
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 43/273 (15%)
Query: 7 DRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVF--- 63
D+ +AIK EG S EI +L ++KH NIV L D+ S L L+
Sbjct: 39 DKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 98
Query: 64 ---EHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLL---I 117
E D+ ++K F + E D ++Q+L + + H ++HRDLKP+NLL +
Sbjct: 99 SGGELFDRIVEKGFYT---ERD---ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL 152
Query: 118 NKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAE 177
+++ ++ ++DFGL++ P S T Y P+VL K Y+ ++D WS G I
Sbjct: 153 DEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYI 210
Query: 178 LANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPK 237
L P + +D K ++L E P + + D
Sbjct: 211 LLCGYPPFYDENDA----KLFEQILKAEYEFDSPYWDDISD------------------- 247
Query: 238 LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
+D ++ L+ +P +R + E A+ H + +
Sbjct: 248 ---SAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 43/273 (15%)
Query: 7 DRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVF--- 63
D+ +AIK EG S EI +L ++KH NIV L D+ S L L+
Sbjct: 39 DKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 98
Query: 64 ---EHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLL---I 117
E D+ ++K F + E D ++Q+L + + H ++HRDLKP+NLL +
Sbjct: 99 SGGELFDRIVEKGFYT---ERD---ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL 152
Query: 118 NKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAE 177
+++ ++ ++DFGL++ P S T Y P+VL K Y+ ++D WS G I
Sbjct: 153 DEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYI 210
Query: 178 LANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPK 237
L P + +D K ++L E P + + D
Sbjct: 211 LLCGYPPFYDENDA----KLFEQILKAEYEFDSPYWDDISD------------------- 247
Query: 238 LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
+D ++ L+ +P +R + E A+ H + +
Sbjct: 248 ---SAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 43/243 (17%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL--NGEIDLDIVKSFM 90
REI LK +H +I++LY V+ + +V E+ + FD + +G ++ +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGG--ELFDYICKHGRVEEMEARRLF 117
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFG----IPVKCYSAEVV 146
Q+L + +CH V+HRDLKP+N+L++ + K+ADFGL+ + C S
Sbjct: 118 QQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPN-- 175
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
Y P+V+ G +D+WS G I L P D+ + +FK +
Sbjct: 176 ---YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF-----DDEHVPTLFKKIRG-- 225
Query: 207 EDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
G+ +P++ L LL +L +P++R + +D H
Sbjct: 226 -----GVFYIPEY------------------LNRSVATLLMHMLQVDPLKRATIKDIREH 262
Query: 267 IYF 269
+F
Sbjct: 263 EWF 265
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 43/273 (15%)
Query: 7 DRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVF--- 63
D+ +AIK EG S EI +L ++KH NIV L D+ S L L+
Sbjct: 39 DKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 98
Query: 64 ---EHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLL---I 117
E D+ ++K F + E D ++Q+L + + H ++HRDLKP+NLL +
Sbjct: 99 SGGELFDRIVEKGFYT---ERD---ASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL 152
Query: 118 NKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAE 177
+++ ++ ++DFGL++ P S T Y P+VL K Y+ ++D WS G I A
Sbjct: 153 DEDSKIMISDFGLSK-MEDPGSVLSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVI-AY 209
Query: 178 LANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPK 237
+ G P F D+ ++F+ + L +++ Y +S S
Sbjct: 210 ILLCGYPPF----YDENDAKLFEQI------------LKAEYEFDSPYWDDISDS----- 248
Query: 238 LTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
+D ++ L+ +P +R + E A+ H + +
Sbjct: 249 ----AKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 34/261 (13%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKY 73
A+K ++ ++ V + + + L +H + ++ +++ L V E+ + DL +
Sbjct: 49 ALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYH 108
Query: 74 FDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARA 133
S + + DL + +++ GL F HS+ +++RDLK N+L++K+G +K+ADFG+ +
Sbjct: 109 IQSCH-KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE 167
Query: 134 FGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDD 193
+ + T Y P++L G K Y S+D WS G + E+ P F G D ++
Sbjct: 168 NMLGDAKTNXFCGTPDYIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSP-FHGQDEEE 225
Query: 194 QLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCN 253
I + P W L + +DLL +L V
Sbjct: 226 LFHSI--RMDNPFYPRW---------------------------LEKEAKDLLVKLFVRE 256
Query: 254 PVQRMSAE-DAMSHIYFSDLN 273
P +R+ D H F ++N
Sbjct: 257 PEKRLGVRGDIRQHPLFREIN 277
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 34/261 (13%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKY 73
A+K ++ ++ V + + + L +H + ++ +++ L V E+ + DL +
Sbjct: 50 ALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYH 109
Query: 74 FDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARA 133
S + + DL + +++ GL F HS+ +++RDLK N+L++K+G +K+ADFG+ +
Sbjct: 110 IQSCH-KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE 168
Query: 134 FGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDD 193
+ + T Y P++L G K Y S+D WS G + E+ P F G D ++
Sbjct: 169 NMLGDAKTNEFCGTPDYIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSP-FHGQDEEE 226
Query: 194 QLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCN 253
I + P W L + +DLL +L V
Sbjct: 227 LFHSI--RMDNPFYPRW---------------------------LEKEAKDLLVKLFVRE 257
Query: 254 PVQRMSAE-DAMSHIYFSDLN 273
P +R+ D H F ++N
Sbjct: 258 PEKRLGVRGDIRQHPLFREIN 278
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEID-LDIVKSFM 90
L E ++K L+H +V+L+ V+ E + L + S G L + F
Sbjct: 58 LAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 117
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEVV 146
Q+ G+AF RN +HRDL+ N+L++ + K+ADFGLAR I Y+ A+
Sbjct: 118 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFP 175
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG---SDVDDQLKRIFKL 201
W P + FG+ +T D+WS G + E+ GR +PG +V L+R +++
Sbjct: 176 IKWTAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM 231
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 5 GVDR-TPNTAL--AIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ P A+ A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 58 GIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 117
Query: 61 LVFEHCDQ-DLKKYFDSLNG---EIDLDIVK------------SFMYQLLRGLAFCHSRN 104
++ E+ + +L++Y + E DI + S YQL RG+ + S+
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFG---IPVKCYSAEVVTLWYRPPDVLFGAKL 161
+HRDL +N+L+ +N +++ADFGLAR K + + W P+ LF ++
Sbjct: 178 CIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFD-RV 235
Query: 162 YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLL 272
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEID-LDIVKSFM 90
L E ++K L+H +V+L+ V+ E + L + S G L + F
Sbjct: 231 LAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 290
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEVV 146
Q+ G+AF RN +HRDL+ N+L++ + K+ADFGLAR I Y+ A+
Sbjct: 291 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFP 348
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG 188
W P + FG+ +T D+WS G + E+ GR +PG
Sbjct: 349 IKWTAPEAINFGS--FTIKSDVWSFGILLMEIVTYGRIPYPG 388
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 56/250 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +LKE++H N++ L++V ++ + L+ E + FD L + L + F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATEFL 120
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + HS + H DLKP+N +L+++N +K+ DFGLA FG
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 181 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 216
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LG ++T ++ + +++ Y + S A +D ++RLLV +P +
Sbjct: 217 ----FLGDTKQETLANVSAV-NYEFEDEYFSNTS---------ALAKDFIRRLLVKDPKK 262
Query: 257 RMSAEDAMSH 266
RM+ +D++ H
Sbjct: 263 RMTIQDSLQH 272
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 47/230 (20%)
Query: 5 GVDR-TPNTAL--AIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ P A+ A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 58 GIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 117
Query: 61 LVFEHCDQ-DLKKYFDSLNG---EIDLDIVK------------SFMYQLLRGLAFCHSRN 104
++ E+ + +L++Y + E DI + S YQL RG+ + S+
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFG------------IPVKCYSAEVVTLWYRP 152
+HRDL +N+L+ +N +K+ADFGLAR +PVK +
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVK----------WMA 227
Query: 153 PDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
P+ LF ++YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 228 PEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLL 272
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 56/250 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +LKE++H N++ L++V ++ + L+ E + FD L + L + F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATEFL 120
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + HS + H DLKP+N +L+++N +K+ DFGLA FG
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 181 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 216
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LG ++T ++ + +++ Y + S A +D ++RLLV +P +
Sbjct: 217 ----FLGDTKQETLANVSAV-NYEFEDEYFSNTS---------ALAKDFIRRLLVKDPKK 262
Query: 257 RMSAEDAMSH 266
RM+ +D++ H
Sbjct: 263 RMTIQDSLQH 272
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 56/250 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +LKE++H N++ L++V ++ + L+ E + FD L + L + F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATEFL 120
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + HS + H DLKP+N +L+++N +K+ DFGLA FG
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 181 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 216
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LG ++T ++ + +++ Y + S A +D ++RLLV +P +
Sbjct: 217 ----FLGDTKQETLANVSAV-NYEFEDEYFSNTS---------ALAKDFIRRLLVKDPKK 262
Query: 257 RMSAEDAMSH 266
RM+ +D++ H
Sbjct: 263 RMTIQDSLQH 272
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 56/250 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +LKE++H N++ L++V ++ + L+ E + FD L + L + F+
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATEFL 119
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + HS + H DLKP+N +L+++N +K+ DFGLA FG
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 179
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 180 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 215
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LG ++T ++ + +++ Y + S A +D ++RLLV +P +
Sbjct: 216 ----FLGDTKQETLANVSAV-NYEFEDEYFSNTS---------ALAKDFIRRLLVKDPKK 261
Query: 257 RMSAEDAMSH 266
RM+ +D++ H
Sbjct: 262 RMTIQDSLQH 271
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 56/250 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +LKE++H N++ L++V ++ + L+ E + FD L + L + F+
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATEFL 119
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + HS + H DLKP+N +L+++N +K+ DFGLA FG
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 179
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 180 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 215
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LG ++T ++ + +++ Y + S A +D ++RLLV +P +
Sbjct: 216 ----FLGDTKQETLANVSAV-NYEFEDEYFSNTS---------ALAKDFIRRLLVKDPKK 261
Query: 257 RMSAEDAMSH 266
RM+ +D++ H
Sbjct: 262 RMTIQDSLQH 271
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 56/250 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +LKE++H N++ L++V ++ + L+ E + FD L + L + F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATEFL 120
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + HS + H DLKP+N +L+++N +K+ DFGLA FG
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 181 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 216
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LG ++T ++ + +++ Y + S A +D ++RLLV +P +
Sbjct: 217 ----FLGDTKQETLANVSAV-NYEFEDEYFSNTS---------ALAKDFIRRLLVKDPKK 262
Query: 257 RMSAEDAMSH 266
RM+ +D++ H
Sbjct: 263 RMTIQDSLQH 272
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 56/250 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +LKE++H N++ L++V ++ + L+ E + FD L + L + F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATEFL 120
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + HS + H DLKP+N +L+++N +K+ DFGLA FG
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 181 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 216
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LG ++T ++ + +++ Y + S A +D ++RLLV +P +
Sbjct: 217 ----FLGDTKQETLANVSAV-NYEFEDEYFSNTS---------ALAKDFIRRLLVKDPKK 262
Query: 257 RMSAEDAMSH 266
RM+ +D++ H
Sbjct: 263 RMTIQDSLQH 272
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 56/250 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +LKE++H N++ L++V ++ + L+ E + FD L + L + F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATEFL 120
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + HS + H DLKP+N +L+++N +K+ DFGLA FG
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 181 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 216
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LG ++T ++ + +++ Y + S A +D ++RLLV +P +
Sbjct: 217 ----FLGDTKQETLANVSAV-NYEFEDEYFSNTS---------ALAKDFIRRLLVKDPKK 262
Query: 257 RMSAEDAMSH 266
RM+ +D++ H
Sbjct: 263 RMTIQDSLQH 272
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 40/265 (15%)
Query: 16 IKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFD 75
+K +V N + E +L+E+KH IV L + KL L+ E+ + F
Sbjct: 53 LKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGG--ELFM 110
Query: 76 SLNGEIDL--DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARA 133
L E D ++ ++ L H + +++RDLKP+N+++N G +KL DFGL +
Sbjct: 111 QLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170
Query: 134 FGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDD 193
T+ Y P++L + + ++D WS G + ++ G P F G +
Sbjct: 171 SIHDGTVTHTFCGTIEYMAPEILMRSG-HNRAVDWWSLGALMYDMLT-GAPPFTGENRKK 228
Query: 194 QLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCN 253
+ +I K +NL P LT + RDLL++LL N
Sbjct: 229 TIDKILKC----------KLNL-------------------PPYLTQEARDLLKKLLKRN 259
Query: 254 PVQRMS-----AEDAMSHIYFSDLN 273
R+ A + +H +F +N
Sbjct: 260 AASRLGAGPGDAGEVQAHPFFRHIN 284
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 56/250 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +LKE++H N++ L++V ++ + L+ E + FD L + L + F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATEFL 120
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + HS + H DLKP+N +L+++N +K+ DFGLA FG
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 181 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 216
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LG ++T ++ + +++ Y + S A +D ++RLLV +P +
Sbjct: 217 ----FLGDTKQETLANVSAV-NYEFEDEYFSNTS---------ALAKDFIRRLLVKDPKK 262
Query: 257 RMSAEDAMSH 266
RM+ +D++ H
Sbjct: 263 RMTIQDSLQH 272
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 56/250 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +LKE++H N++ L++V ++ + L+ E + FD L + L + F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATEFL 120
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + HS + H DLKP+N +L+++N +K+ DFGLA FG
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 181 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 216
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LG ++T ++ + +++ Y + S A +D ++RLLV +P +
Sbjct: 217 ----FLGDTKQETLANVSAV-NYEFEDEYFSNTS---------ALAKDFIRRLLVKDPKK 262
Query: 257 RMSAEDAMSH 266
RM+ +D++ H
Sbjct: 263 RMTIQDSLQH 272
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 56/250 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +LKE++H N++ L++V ++ + L+ E + FD L + L + F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATEFL 120
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + HS + H DLKP+N +L+++N +K+ DFGLA FG
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 181 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 216
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LG ++T ++ + +++ Y + S A +D ++RLLV +P +
Sbjct: 217 ----FLGDTKQETLANVSAV-NYEFEDEYFSNTS---------ALAKDFIRRLLVKDPKK 262
Query: 257 RMSAEDAMSH 266
RM+ +D++ H
Sbjct: 263 RMTIQDSLQH 272
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 58/251 (23%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +L+E++H NI+ L+D+ ++ + L+ E + FD L + L D F+
Sbjct: 57 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGG--ELFDFLAEKESLTEDEATQFL 114
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINK---NGELKLADFGLARA----------FGI 136
Q+L G+ + HS+ + H DLKP+N +L++K N +KL DFG+A FG
Sbjct: 115 KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT 174
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 175 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 210
Query: 197 RIFKLLGTPTEDTWPGMNLLP-DFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
LG ++T ++ + DF + + +D ++RLLV +P
Sbjct: 211 ----FLGETKQETLTNISAVNYDFD-----------EEYFSNTSELAKDFIRRLLVKDPK 255
Query: 256 QRMSAEDAMSH 266
+RM+ ++ H
Sbjct: 256 RRMTIAQSLEH 266
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 40/265 (15%)
Query: 16 IKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFD 75
+K +V N + E +L+E+KH IV L + KL L+ E+ + F
Sbjct: 53 LKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGG--ELFM 110
Query: 76 SLNGEIDL--DIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARA 133
L E D ++ ++ L H + +++RDLKP+N+++N G +KL DFGL +
Sbjct: 111 QLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170
Query: 134 FGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDD 193
T+ Y P++L + + ++D WS G + ++ G P F G +
Sbjct: 171 SIHDGTVTHXFCGTIEYMAPEILMRSG-HNRAVDWWSLGALMYDMLT-GAPPFTGENRKK 228
Query: 194 QLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCN 253
+ +I K +NL P LT + RDLL++LL N
Sbjct: 229 TIDKILKC----------KLNL-------------------PPYLTQEARDLLKKLLKRN 259
Query: 254 PVQRMS-----AEDAMSHIYFSDLN 273
R+ A + +H +F +N
Sbjct: 260 AASRLGAGPGDAGEVQAHPFFRHIN 284
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY 91
++E+ L++L+H N ++ E LV E+C + + + + +
Sbjct: 102 IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH 161
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYR 151
L+GLA+ HS N++HRD+K N+L+++ G +KL DFG A P + V T ++
Sbjct: 162 GALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA-PANXF---VGTPYWM 217
Query: 152 PPDVLFG--AKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+V+ Y +D+WS G ELA PLF
Sbjct: 218 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 254
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 56/250 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +LKE++H N++ L++V ++ + L+ E + FD L + L + F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATEFL 120
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + HS + H DLKP+N +L+++N +K+ DFGLA FG
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 181 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 216
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LG ++T ++ + +++ Y + S A +D ++RLLV +P +
Sbjct: 217 ----FLGDTKQETLANVSAV-NYEFEDEYFSNTS---------ALAKDFIRRLLVKDPKK 262
Query: 257 RMSAEDAMSH 266
RM+ +D++ H
Sbjct: 263 RMTIQDSLQH 272
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 43/257 (16%)
Query: 29 SSALREICLLKELK-HKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDI-- 85
+ L+E+ +L+++ H NI++L D + LVF+ + + FD L ++ L
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTEKVTLSEKE 125
Query: 86 VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEV 145
+ M LL + H N++HRDLKP+N+L++ + +KL DFG + P + +
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD-PGEKLRSVC 184
Query: 146 VTLWYRPPDVLFGA-----KLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
T Y P+++ + Y +DMWS G I L AG P F L+ I
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL-AGSPPFWHRKQMLMLRMIMS 243
Query: 201 ---LLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQR 257
G+P D + + +DL+ R LV P +R
Sbjct: 244 GNYQFGSPEWDDY----------------------------SDTVKDLVSRFLVVQPQKR 275
Query: 258 MSAEDAMSHIYFSDLNV 274
+AE+A++H +F V
Sbjct: 276 YTAEEALAHPFFQQYVV 292
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 56/250 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +LKE++H N++ L++V ++ + L+ E + FD L + L + F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATEFL 120
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + HS + H DLKP+N +L+++N +K+ DFGLA FG
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + E+V Y P + DMWS G I L + P
Sbjct: 181 PA-FVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 216
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LG ++T ++ + +++ Y + S A +D ++RLLV +P +
Sbjct: 217 ----FLGDTKQETLANVSAV-NYEFEDEYFSNTS---------ALAKDFIRRLLVKDPKK 262
Query: 257 RMSAEDAMSH 266
RM+ +D++ H
Sbjct: 263 RMTIQDSLQH 272
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 29/265 (10%)
Query: 7 DRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC 66
D+ +A+K ++ + + REI + L+H NIVR +V+ + L ++ E+
Sbjct: 41 DKLTKELVAVK--YIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98
Query: 67 DQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN--GELK 124
G D + F QLL G+++CHS + HRDLK +N L++ + LK
Sbjct: 99 SGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLK 158
Query: 125 LADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRP 184
+ DFG +++ + + S V T Y P+VL + D+WS G + P
Sbjct: 159 ICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
Query: 185 LFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRD 244
+ D K I ++L +PD +++ +
Sbjct: 218 FEDPEEPRDYRKTIQRILSVKYS--------IPD----------------DIRISPECCH 253
Query: 245 LLQRLLVCNPVQRMSAEDAMSHIYF 269
L+ R+ V +P R+S + +H +F
Sbjct: 254 LISRIFVADPATRISIPEIKTHSWF 278
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 58/251 (23%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +L+E++H NI+ L+D+ ++ + L+ E + FD L + L D F+
Sbjct: 64 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGG--ELFDFLAEKESLTEDEATQFL 121
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINK---NGELKLADFGLARA----------FGI 136
Q+L G+ + HS+ + H DLKP+N +L++K N +KL DFG+A FG
Sbjct: 122 KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT 181
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 182 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 217
Query: 197 RIFKLLGTPTEDTWPGMNLLP-DFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
LG ++T ++ + DF + + +D ++RLLV +P
Sbjct: 218 ----FLGETKQETLTNISAVNYDFD-----------EEYFSNTSELAKDFIRRLLVKDPK 262
Query: 256 QRMSAEDAMSH 266
+RM ++ H
Sbjct: 263 RRMXIAQSLEH 273
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
G+D +AIK L E +EI +L + + + Y + KL ++ E
Sbjct: 46 GIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 105
Query: 65 HCDQDLKKYFDSLN-GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGEL 123
+ D L G +D + + + ++L+GL + HS +HRD+K N+L++++GE+
Sbjct: 106 YLGGG--SALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEV 163
Query: 124 KLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR 183
KLADFG+A + V T ++ P+V+ Y + D+WS G ELA
Sbjct: 164 KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYDSKADIWSLGITAIELARGEP 222
Query: 184 P 184
P
Sbjct: 223 P 223
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY 91
++E+ L++L+H N ++ E LV E+C + + + + +
Sbjct: 63 IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH 122
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYR 151
L+GLA+ HS N++HRD+K N+L+++ G +KL DFG A P + V T ++
Sbjct: 123 GALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA-PANXF---VGTPYWM 178
Query: 152 PPDVLFGAK--LYTTSIDMWSAGCIFAELANAGRPLF 186
P+V+ Y +D+WS G ELA PLF
Sbjct: 179 APEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 58/251 (23%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +L+E++H NI+ L+D+ ++ + L+ E + FD L + L D F+
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGG--ELFDFLAEKESLTEDEATQFL 135
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINK---NGELKLADFGLARA----------FGI 136
Q+L G+ + HS+ + H DLKP+N +L++K N +KL DFG+A FG
Sbjct: 136 KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT 195
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 196 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 231
Query: 197 RIFKLLGTPTEDTWPGMNLLP-DFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
LG ++T ++ + DF + + +D ++RLLV +P
Sbjct: 232 ----FLGETKQETLTNISAVNYDFD-----------EEYFSNTSELAKDFIRRLLVKDPK 276
Query: 256 QRMSAEDAMSH 266
+RM ++ H
Sbjct: 277 RRMXIAQSLEH 287
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 39/248 (15%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-----DLKKYFDSLNGEIDLDIVK 87
RE + LKH +IV L + S+ L +VFE D ++ K D+ G + + V
Sbjct: 77 REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA--GFVYSEAVA 134
Query: 88 S-FMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVKCYSA 143
S +M Q+L L +CH N++HRD+KP +L+ + +KL FG+A G
Sbjct: 135 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 194
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
V T + P+V+ + Y +D+W G I L + P + + R+F+ +
Sbjct: 195 RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTKE------RLFEGI- 246
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
+ +K P +S S +DL++R+L+ +P +R++ +A
Sbjct: 247 -----------IKGKYKMNPRQWSHISES---------AKDLVRRMLMLDPAERITVYEA 286
Query: 264 MSHIYFSD 271
++H + +
Sbjct: 287 LNHPWLKE 294
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFM 90
L+E ++KE+KH N+V+L V E +V E+ +L Y N E +V +M
Sbjct: 76 LKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYM 135
Query: 91 -YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 136 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI 195
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L ++ D+W+ G + E+A G +PG D L +++ LL
Sbjct: 196 KWTAPESL-AYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID----LSQVYDLL 244
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
G+D +AIK L E +EI +L + + + Y + KL ++ E
Sbjct: 26 GIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 85
Query: 65 HCDQDLKKYFDSLN-GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGEL 123
+ D L G +D + + + ++L+GL + HS +HRD+K N+L++++GE+
Sbjct: 86 YLGGG--SALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEV 143
Query: 124 KLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR 183
KLADFG+A + V T ++ P+V+ Y + D+WS G ELA
Sbjct: 144 KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYDSKADIWSLGITAIELARGEP 202
Query: 184 P 184
P
Sbjct: 203 P 203
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 29/221 (13%)
Query: 5 GVDR-TPNTAL--AIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ P A+ A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 58 GIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 117
Query: 61 LVFEHCDQ-DLKKYFDSLNG---EIDLDIVK------------SFMYQLLRGLAFCHSRN 104
++ + + +L++Y + E DI + S YQL RG+ + S+
Sbjct: 118 VIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFG---IPVKCYSAEVVTLWYRPPDVLFGAKL 161
+HRDL +N+L+ +N +K+ADFGLAR K + + W P+ LF ++
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFD-RV 235
Query: 162 YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLL 272
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 43/257 (16%)
Query: 29 SSALREICLLKELK-HKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDI-- 85
+ L+E+ +L+++ H NI++L D + LVF+ + + FD L ++ L
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTEKVTLSEKE 125
Query: 86 VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEV 145
+ M LL + H N++HRDLKP+N+L++ + +KL DFG + P +
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD-PGEKLREVC 184
Query: 146 VTLWYRPPDVLFGAKL-----YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
T Y P+++ + Y +DMWS G I L AG P F L+ I
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL-AGSPPFWHRKQMLMLRMIMS 243
Query: 201 ---LLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQR 257
G+P D + + +DL+ R LV P +R
Sbjct: 244 GNYQFGSPEWDDY----------------------------SDTVKDLVSRFLVVQPQKR 275
Query: 258 MSAEDAMSHIYFSDLNV 274
+AE+A++H +F V
Sbjct: 276 YTAEEALAHPFFQQYVV 292
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
G+D +AIK L E +EI +L + + + Y + KL ++ E
Sbjct: 41 GIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100
Query: 65 HCDQDLKKYFDSLN-GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGEL 123
+ D L G +D + + + ++L+GL + HS +HRD+K N+L++++GE+
Sbjct: 101 YLGGG--SALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEV 158
Query: 124 KLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR 183
KLADFG+A + V T ++ P+V+ Y + D+WS G ELA
Sbjct: 159 KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDSKADIWSLGITAIELARGEP 217
Query: 184 P 184
P
Sbjct: 218 P 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
G+D +AIK L E +EI +L + + + Y + KL ++ E
Sbjct: 26 GIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 85
Query: 65 HCDQDLKKYFDSLN-GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGEL 123
+ D L G +D + + + ++L+GL + HS +HRD+K N+L++++GE+
Sbjct: 86 YLGGG--SALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEV 143
Query: 124 KLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR 183
KLADFG+A + V T ++ P+V+ Y + D+WS G ELA
Sbjct: 144 KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDSKADIWSLGITAIELARGEP 202
Query: 184 P 184
P
Sbjct: 203 P 203
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 56/250 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +LKE++H N++ L++V ++ + L+ E + FD L + L + F+
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILIGELVAGG--ELFDFLAEKESLTEEEATEFL 120
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + HS + H DLKP+N +L+++N +K+ DFGLA FG
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 181 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 216
Query: 197 RIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
LG ++T ++ + +++ Y + S A +D ++RLLV +P +
Sbjct: 217 ----FLGDTKQETLANVSAV-NYEFEDEYFSNTS---------ALAKDFIRRLLVKDPKK 262
Query: 257 RMSAEDAMSH 266
RM+ +D++ H
Sbjct: 263 RMTIQDSLQH 272
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 39/248 (15%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-----DLKKYFDSLNGEIDLDIVK 87
RE + LKH +IV L + S+ L +VFE D ++ K D+ G + + V
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA--GFVYSEAVA 132
Query: 88 S-FMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVKCYSA 143
S +M Q+L L +CH N++HRD+KP +L+ + +KL FG+A G
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 192
Query: 144 EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
V T + P+V+ + Y +D+W G I L + P + + R+F+ +
Sbjct: 193 RVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTKE------RLFEGI- 244
Query: 204 TPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA 263
+ +K P +S S +DL++R+L+ +P +R++ +A
Sbjct: 245 -----------IKGKYKMNPRQWSHISES---------AKDLVRRMLMLDPAERITVYEA 284
Query: 264 MSHIYFSD 271
++H + +
Sbjct: 285 LNHPWLKE 292
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 110/253 (43%), Gaps = 43/253 (16%)
Query: 29 SSALREICLLKELK-HKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDI-- 85
+ L+E+ +L+++ H NI++L D + LVF+ + + FD L ++ L
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTEKVTLSEKE 112
Query: 86 VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEV 145
+ M LL + H N++HRDLKP+N+L++ + +KL DFG + P +
Sbjct: 113 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD-PGEKLREVC 171
Query: 146 VTLWYRPPDVLFGAKL-----YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
T Y P+++ + Y +DMWS G I L AG P F L+ I
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL-AGSPPFWHRKQMLMLRMIMS 230
Query: 201 ---LLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQR 257
G+P D + + +DL+ R LV P +R
Sbjct: 231 GNYQFGSPEWDDY----------------------------SDTVKDLVSRFLVVQPQKR 262
Query: 258 MSAEDAMSHIYFS 270
+AE+A++H +F
Sbjct: 263 YTAEEALAHPFFQ 275
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 110/237 (46%), Gaps = 29/237 (12%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
E+ ++++ +H+N+V +Y+ +L +V E + + + ++ + + + +
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAV 256
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
L+ L+ H++ V+HRD+K ++L+ +G +KL+DFG V V T ++ P
Sbjct: 257 LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 316
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGM 213
+ L Y +D+WS G + E+ + P F ++ + K++
Sbjct: 317 E-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-----NEPPLKAMKMIRD--------- 361
Query: 214 NLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
NL P K + +V+P L + L RLLV +P QR +A + + H + +
Sbjct: 362 NLPPRLK---------NLHKVSPSL----KGFLDRLLVRDPAQRATAAELLKHPFLA 405
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 29/221 (13%)
Query: 5 GVDR-TPNTAL--AIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLT 60
G+D+ P A+ A+K E S + E+ ++K + KHKNI+ L + L
Sbjct: 58 GIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 117
Query: 61 LVFEHCDQ-DLKKYFDSLNG---EIDLDIVK------------SFMYQLLRGLAFCHSRN 104
++ + + +L++Y + E DI + S YQL RG+ + S+
Sbjct: 118 VIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFG---IPVKCYSAEVVTLWYRPPDVLFGAKL 161
+HRDL +N+L+ +N +K+ADFGLAR K + + W P+ LF ++
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM-APEALFD-RV 235
Query: 162 YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
YT D+WS G + E+ G +PG V++ +FKLL
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE----LFKLL 272
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 182 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 230
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 110/237 (46%), Gaps = 29/237 (12%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
E+ ++++ +H+N+V +Y+ +L +V E + + + ++ + + + +
Sbjct: 121 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAV 179
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
L+ L+ H++ V+HRD+K ++L+ +G +KL+DFG V V T ++ P
Sbjct: 180 LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 239
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGM 213
+ L Y +D+WS G + E+ + P F ++ + K++
Sbjct: 240 E-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-----NEPPLKAMKMIRD--------- 284
Query: 214 NLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
NL P K + +V+P L + L RLLV +P QR +A + + H + +
Sbjct: 285 NLPPRLK---------NLHKVSPSL----KGFLDRLLVRDPAQRATAAELLKHPFLA 328
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 118 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 177
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 178 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 226
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 28/178 (15%)
Query: 29 SSALREICLLKELKHKNIVRLYDV----------LHSEKKLTLVF---EHCD-QDLKKYF 74
S+ L E+ LL L H+ +VR Y + + KK + +F E+C+ + L
Sbjct: 47 STILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLI 106
Query: 75 DSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA--- 131
S N D Q+L L++ HS+ ++HRDLKP N+ I+++ +K+ DFGLA
Sbjct: 107 HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 132 -RAFGI----------PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
R+ I ++ + T Y +VL G Y IDM+S G IF E+
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 31/238 (13%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
E+ ++++ +H+N+V +Y+ +L +V E + + + ++ + + + +
Sbjct: 71 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAV 129
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
L+ L+ H++ V+HRD+K ++L+ +G +KL+DFG V V T ++ P
Sbjct: 130 LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 189
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGM 213
+ L Y +D+WS G + E+ + P F E M
Sbjct: 190 E-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-------------------NEPPLKAM 229
Query: 214 NLLPDFKPFPMYHPSM-SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++ D P P + + +V+P L + L RLLV +P QR +A + + H + +
Sbjct: 230 KMIRDNLP-----PRLKNLHKVSPSL----KGFLDRLLVRDPAQRATAAELLKHPFLA 278
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 31/238 (13%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
E+ ++++ +H+N+V +Y+ +L +V E + + + ++ + + + +
Sbjct: 78 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAV 136
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
L+ L+ H++ V+HRD+K ++L+ +G +KL+DFG V V T ++ P
Sbjct: 137 LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 196
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGM 213
+ L Y +D+WS G + E+ + P F E M
Sbjct: 197 E-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-------------------NEPPLKAM 236
Query: 214 NLLPDFKPFPMYHPSM-SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++ D P P + + +V+P L + L RLLV +P QR +A + + H + +
Sbjct: 237 KMIRDNLP-----PRLKNLHKVSPSL----KGFLDRLLVRDPAQRATAAELLKHPFLA 285
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 28/178 (15%)
Query: 29 SSALREICLLKELKHKNIVRLYDV----------LHSEKKLTLVF---EHCDQ-DLKKYF 74
S+ L E+ LL L H+ +VR Y + + KK + +F E+C+ L
Sbjct: 47 STILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI 106
Query: 75 DSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA--- 131
S N D Q+L L++ HS+ ++HRDLKP N+ I+++ +K+ DFGLA
Sbjct: 107 HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 132 -RAFGI----------PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
R+ I ++ + T Y +VL G Y IDM+S G IF E+
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 31/238 (13%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
E+ ++++ +H+N+V +Y+ +L +V E + + + ++ + + + +
Sbjct: 67 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAV 125
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
L+ L+ H++ V+HRD+K ++L+ +G +KL+DFG V V T ++ P
Sbjct: 126 LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 185
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGM 213
+ L Y +D+WS G + E+ + P F E M
Sbjct: 186 E-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-------------------NEPPLKAM 225
Query: 214 NLLPDFKPFPMYHPSM-SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++ D P P + + +V+P L + L RLLV +P QR +A + + H + +
Sbjct: 226 KMIRDNLP-----PRLKNLHKVSPSL----KGFLDRLLVRDPAQRATAAELLKHPFLA 274
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 31/238 (13%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
E+ ++++ +H+N+V +Y+ +L +V E + + + ++ + + + +
Sbjct: 76 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAV 134
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
L+ L+ H++ V+HRD+K ++L+ +G +KL+DFG V V T ++ P
Sbjct: 135 LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 194
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGM 213
+ L Y +D+WS G + E+ + P F E M
Sbjct: 195 E-LISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-------------------NEPPLKAM 234
Query: 214 NLLPDFKPFPMYHPSM-SFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFS 270
++ D P P + + +V+P L + L RLLV +P QR +A + + H + +
Sbjct: 235 KMIRDNLP-----PRLKNLHKVSPSL----KGFLDRLLVRDPAQRATAAELLKHPFLA 283
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 181
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 182 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 230
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 115/259 (44%), Gaps = 49/259 (18%)
Query: 29 SSALREICLLKELKHKNIVRLYDVLHSEKKLTLVF------EHCDQDLKKYFDSLNGEID 82
SS EI +LK++KH+NIV L D+ S LV E D+ L++ + E D
Sbjct: 51 SSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER---GVYTEKD 107
Query: 83 LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVK 139
+V + Q+L + + H ++HRDLKP+NLL +N ++ + DFGL++ +
Sbjct: 108 ASLV---IQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI- 163
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVD--DQLKR 197
S T Y P+VL K Y+ ++D WS G I L P + ++ +++K
Sbjct: 164 -MSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE 221
Query: 198 IFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQR 257
+ +P D ++ +D + LL +P +R
Sbjct: 222 GYYEFESPFWD----------------------------DISESAKDFICHLLEKDPNER 253
Query: 258 MSAEDAMSHIYFSDLNVAI 276
+ E A+SH + D N A+
Sbjct: 254 YTCEKALSHPWI-DGNTAL 271
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 182 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 230
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 182 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 230
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 120
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 121 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 180
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 181 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 229
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 59/306 (19%)
Query: 21 LVGNEGVPSSALR-EICLLKELKHKN------IVRLYDVLHSEKKLTLVFEHCDQDLKKY 73
++ N G A R EI +LK++K K+ V + D + + + FE ++ ++
Sbjct: 52 IIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEF 111
Query: 74 FDSLNGE-IDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLL-IN------------- 118
N + L V+ YQL L F H + H DLKP+N+L +N
Sbjct: 112 LKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSC 171
Query: 119 -----KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
KN +++ADFG A + ++ V T YRPP+V+ + D+WS GC
Sbjct: 172 EEKSVKNTSIRVADFGSA---TFDHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGC 227
Query: 174 IFAELANAGRPLFPGSDVDDQLKRIFKLLG-TPT--------------------EDTWPG 212
I E G LF + + L + K+LG P+ E++ G
Sbjct: 228 ILFEYYR-GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDG 286
Query: 213 MNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
+ + KP Y S V + DL++R+L +P QR++ +A+ H +F+ L
Sbjct: 287 RYVKENCKPLKSYMLQDSLEHV------QLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340
Query: 273 NVAIKS 278
+S
Sbjct: 341 TPEERS 346
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 59/306 (19%)
Query: 21 LVGNEGVPSSALR-EICLLKELKHKN------IVRLYDVLHSEKKLTLVFEHCDQDLKKY 73
++ N G A R EI +LK++K K+ V + D + + + FE ++ ++
Sbjct: 61 IIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEF 120
Query: 74 FDSLNGE-IDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLL-IN------------- 118
N + L V+ YQL L F H + H DLKP+N+L +N
Sbjct: 121 LKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSC 180
Query: 119 -----KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
KN +++ADFG A + ++ V T YRPP+V+ + D+WS GC
Sbjct: 181 EEKSVKNTSIRVADFGSA---TFDHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGC 236
Query: 174 IFAELANAGRPLFPGSDVDDQLKRIFKLLG-TPT--------------------EDTWPG 212
I E G LF + + L + K+LG P+ E++ G
Sbjct: 237 ILFEYYR-GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDG 295
Query: 213 MNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
+ + KP Y S V + DL++R+L +P QR++ +A+ H +F+ L
Sbjct: 296 RYVKENCKPLKSYMLQDSLEHV------QLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 349
Query: 273 NVAIKS 278
+S
Sbjct: 350 TPEERS 355
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 8/161 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
L E ++ + H NI+RL V+ K + ++ E+ + L K+ +GE + + +
Sbjct: 94 LGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML 153
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYS---AEVV 146
+ G+ + + N +HRDL +N+L+N N K++DFGL+R P Y+ ++
Sbjct: 154 RGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 213
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF 186
W P + + + +T++ D+WS G + E+ G RP +
Sbjct: 214 IRWTAPEAISY--RKFTSASDVWSFGIVMWEVMTYGERPYW 252
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 22 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 81
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 82 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDEN 140
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 141 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 198
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 199 LLYDMVCGDIPF 210
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 59/306 (19%)
Query: 21 LVGNEGVPSSALR-EICLLKELKHKN------IVRLYDVLHSEKKLTLVFEHCDQDLKKY 73
++ N G A R EI +LK++K K+ V + D + + + FE ++ ++
Sbjct: 84 IIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEF 143
Query: 74 FDSLNGE-IDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLL-IN------------- 118
N + L V+ YQL L F H + H DLKP+N+L +N
Sbjct: 144 LKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSC 203
Query: 119 -----KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
KN +++ADFG A + ++ V T YRPP+V+ + D+WS GC
Sbjct: 204 EEKSVKNTSIRVADFGSA---TFDHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGC 259
Query: 174 IFAELANAGRPLFPGSDVDDQLKRIFKLLG-TPT--------------------EDTWPG 212
I E G LF + + L + K+LG P+ E++ G
Sbjct: 260 ILFEYYR-GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDG 318
Query: 213 MNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
+ + KP Y S V + DL++R+L +P QR++ +A+ H +F+ L
Sbjct: 319 RYVKENCKPLKSYMLQDSLEHV------QLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 372
Query: 273 NVAIKS 278
+S
Sbjct: 373 TPEERS 378
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 42/246 (17%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHC------DQDLKKYFDSLNGEIDLDIVK 87
EI +L L H NI++L ++ + +++LV E D+ ++K + S D
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADA---- 153
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINK---NGELKLADFGLARAFGIPVKCYSAE 144
+ Q+L +A+ H ++HRDLKP+NLL + LK+ADFGL++ V +
Sbjct: 154 --VKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV- 210
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
T Y P++L G Y +DMWS G I L P + +RI
Sbjct: 211 CGTPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY 269
Query: 205 PTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM 264
W ++L +DL+++L+V +P +R++ A+
Sbjct: 270 FISPWWDEVSL-------------------------NAKDLVRKLIVLDPKKRLTTFQAL 304
Query: 265 SHIYFS 270
H + +
Sbjct: 305 QHPWVT 310
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E+ ++
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 177 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 225
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 177 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 225
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 126/253 (49%), Gaps = 24/253 (9%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD----LKKYFDSLNGE----IDLDI 85
E+ ++ ++K++ + ++ + ++ +++E+ + D +YF L+ I + +
Sbjct: 93 ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV 152
Query: 86 VKSFMYQLLRGLAFCHS-RNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE 144
+K + +L ++ H+ +N+ HRD+KP N+L++KNG +KL+DFG + + K
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEY--MVDKKIKGS 210
Query: 145 VVTLWYRPPDVLFGAKLYT-TSIDMWSAG-CIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
T + PP+ Y +D+WS G C++ N + P S + L +F +
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYN----VVPFS-LKISLVELFNNI 265
Query: 203 GTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAED 262
T + +P L + +P+ + + S L+ + D L+ L NP +R+++ED
Sbjct: 266 RTKNIE-YP---LDRNHFLYPLTNKKSTCSNNF--LSNEDIDFLKLFLRKNPAERITSED 319
Query: 263 AMSHIYFSDLNVA 275
A+ H + +D N+
Sbjct: 320 ALKHEWLADTNIE 332
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 177 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 225
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E+ ++
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 177 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 225
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 178
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 179 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 227
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 178
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 179 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 227
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 70 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 129
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 130 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 189
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 190 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 238
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 26 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 85
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 86 DSFVLILERMEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 144
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 145 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 202
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 203 LLYDMVCGDIPF 214
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 37/252 (14%)
Query: 25 EGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL--NGEID 82
+G SS EI +L+++KH+NIV L D+ S L LV + + FD + G
Sbjct: 61 KGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGG--ELFDRIVEKGFYT 118
Query: 83 LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVK 139
+ + Q+L + + H ++HRDLKP+NLL ++ ++ ++DFGL++ G
Sbjct: 119 EKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG-KGD 177
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
S T Y P+VL K Y+ ++D WS G I A + G P F D+ ++F
Sbjct: 178 VMSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVI-AYILLCGYPPF----YDENDSKLF 231
Query: 200 -KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM 258
++L E P + + D +D ++ L+ +P +R
Sbjct: 232 EQILKAEYEFDSPYWDDISD----------------------SAKDFIRNLMEKDPNKRY 269
Query: 259 SAEDAMSHIYFS 270
+ E A H + +
Sbjct: 270 TCEQAARHPWIA 281
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 16/178 (8%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-----AFGIPVKCYSAE 144
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R + P A+
Sbjct: 118 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA---GAK 174
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
W P + + ++ D+W+ G + E+A G +PG D L ++++LL
Sbjct: 175 FPIKWTAPESLAYNK--FSIKSDVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 226
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E+ ++
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 121
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 122 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 182 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 230
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 8/200 (4%)
Query: 4 SGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVF 63
SG R NT +A+K + + L+E +LK+ H NIVRL V ++ + +V
Sbjct: 132 SGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191
Query: 64 EHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
E D + + + + + + G+ + S+ +HRDL +N L+ +
Sbjct: 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNV 251
Query: 123 LKLADFGLARAFGIPVKCYSA---EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELA 179
LK++DFG++R V S +V W P + +G Y++ D+WS G + E
Sbjct: 252 LKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGR--YSSESDVWSFGILLWETF 309
Query: 180 NAGRPLFPGSDVDDQLKRIF 199
+ G +P ++ +Q R F
Sbjct: 310 SLGASPYP--NLSNQQTREF 327
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 16/178 (8%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-----AFGIPVKCYSAE 144
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R + P A+
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA---GAK 175
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
W P + + ++ D+W+ G + E+A G +PG D L ++++LL
Sbjct: 176 FPIKWTAPESLAYNK--FSIKSDVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 227
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 27 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 86
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 87 DSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 145
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 146 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 203
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 204 LLYDMVCGDIPF 215
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E+ ++
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 177 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 225
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 108/237 (45%), Gaps = 31/237 (13%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFMY 91
+EI +L +H+NI+ L++ S ++L ++FE D+ + ++ E++ + S+++
Sbjct: 50 KEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVH 109
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLL--INKNGELKLADFGLARAFGIPVKCYSAEVVTLW 149
Q+ L F HS N+ H D++P+N++ ++ +K+ +FG AR P +
Sbjct: 110 QVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK-PGDNFRLLFTAPE 168
Query: 150 YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDT 209
Y P+V + +T+ DMWS G + L + P ++ ++ I T E+
Sbjct: 169 YYAPEV-HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENIMNAEYTFDEEA 226
Query: 210 WPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ +++ + D + RLLV RM+A +A+ H
Sbjct: 227 F-------------------------KEISIEAMDFVDRLLVKERKSRMTASEALQH 258
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 29/236 (12%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFM 90
++EI ++++ ++V+ Y L +V E+C + N + D + + +
Sbjct: 72 IKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATIL 131
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWY 150
L+GL + H +HRD+K N+L+N G KLADFG+A + + + T ++
Sbjct: 132 QSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFW 191
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTW 210
P+V+ Y D+WS G E+A G+P P +D+ ++ IF + P
Sbjct: 192 MAPEVIQEIG-YNCVADIWSLGITAIEMAE-GKP--PYADIHP-MRAIFMIPTNPP---- 242
Query: 211 PGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
P F+ ++ + + D +++ LV +P QR +A + H
Sbjct: 243 ------PTFRKPELWSDNFT-------------DFVKQCLVKSPEQRATATQLLQH 279
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 26 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 85
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 86 DSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 144
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 145 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 202
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 203 LLYDMVCGDIPF 214
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E+ ++
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 177 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 225
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 27 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 86
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 87 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 145
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 146 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 203
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 204 LLYDMVCGDIPF 215
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 81 IDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-AFGIPVK 139
I ++ + S+ +Q+ RG+ F SR +HRDL +N+L+++N +K+ DFGLAR + P
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 140 CYSAEV-VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQL 195
+ + L + P+ +F K+Y+T D+WS G + E+ + G +PG +D+
Sbjct: 256 VRKGDTRLPLKWMAPESIFD-KIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDF 311
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 27 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 86
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 87 DSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 145
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 146 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 203
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 204 LLYDMVCGDIPF 215
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 7/188 (3%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
G+D +AIK L E +EI +L + + + Y KL ++ E
Sbjct: 42 GIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIME 101
Query: 65 HCDQDLKKYFDSLN-GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGEL 123
+ D L G D + + + ++L+GL + HS +HRD+K N+L+++ G++
Sbjct: 102 YLGGG--SALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDV 159
Query: 124 KLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR 183
KLADFG+A + V T ++ P+V+ Y + D+WS G ELA G
Sbjct: 160 KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-QQSAYDSKADIWSLGITAIELAK-GE 217
Query: 184 PLFPGSDV 191
P P SD+
Sbjct: 218 P--PNSDM 223
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 42 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 101
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 102 DSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 160
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 161 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 218
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 219 LLYDMVCGDIPF 230
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 41 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 100
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 101 DSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 159
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 160 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 217
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 218 LLYDMVCGDIPF 229
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 22 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 81
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 82 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 140
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 141 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 198
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 199 LLYDMVCGDIPF 210
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 8/200 (4%)
Query: 4 SGVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVF 63
SG R NT +A+K + + L+E +LK+ H NIVRL V ++ + +V
Sbjct: 132 SGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191
Query: 64 EHCDQ-DLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
E D + + + + + + G+ + S+ +HRDL +N L+ +
Sbjct: 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNV 251
Query: 123 LKLADFGLARAFGIPVKCYSA---EVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELA 179
LK++DFG++R V S +V W P + +G Y++ D+WS G + E
Sbjct: 252 LKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR--YSSESDVWSFGILLWETF 309
Query: 180 NAGRPLFPGSDVDDQLKRIF 199
+ G +P ++ +Q R F
Sbjct: 310 SLGASPYP--NLSNQQTREF 327
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 25 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 84
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 85 DSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 143
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 144 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 201
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 202 LLYDMVCGDIPF 213
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 55 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 114
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 115 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 173
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 174 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 231
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 232 LLYDMVCGDIPF 243
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 42 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 101
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 102 DSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 160
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 161 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 218
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 219 LLYDMVCGDIPF 230
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 55 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 114
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 115 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 173
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 174 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 231
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 232 LLYDMVCGDIPF 243
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 22 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 81
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 82 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 140
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 141 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 198
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 199 LLYDMVCGDIPF 210
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 61 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 121 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 179
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 180 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 237
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 238 LLYDMVCGDIPF 249
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 41 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 100
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 101 DSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 159
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 160 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 217
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 218 LLYDMVCGDIPF 229
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 49 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 108
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 109 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 167
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 168 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 225
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 226 LLYDMVCGDIPF 237
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 54 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 113
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 114 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 172
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 173 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 230
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 231 LLYDMVCGDIPF 242
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 42 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 101
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 102 DSFVLILERPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 160
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 161 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 218
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 219 LLYDMVCGDIPF 230
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 69 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 128
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 129 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 187
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 188 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 245
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 246 LLYDMVCGDIPF 257
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 55 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 114
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 115 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 173
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 174 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 231
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 232 LLYDMVCGDIPF 243
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 54 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 113
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 114 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 172
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 173 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 230
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 231 LLYDMVCGDIPF 242
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 55 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 114
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 115 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 173
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 174 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 231
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 232 LLYDMVCGDIPF 243
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 54 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 113
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 114 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 172
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 173 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 230
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 231 LLYDMVCGDIPF 242
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 69 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 128
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 129 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 187
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 188 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 245
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 246 LLYDMVCGDIPF 257
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 54 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 113
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 114 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 172
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 173 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 230
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 231 LLYDMVCGDIPF 242
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 13/192 (6%)
Query: 4 SGVDRTPNTALAIKGTH--LVGNEGVPSSALR---EICLLKELKH--KNIVRLYDVLHSE 56
SG+ + N +AIK + + G + R E+ LLK++ ++RL D
Sbjct: 74 SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 133
Query: 57 KKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQN 114
L+ E + QDL + G + ++ +SF +Q+L + CH+ VLHRD+K +N
Sbjct: 134 DSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN 192
Query: 115 LLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
+LI+ N GELKL DFG V Y+ T Y PP+ + + + S +WS G
Sbjct: 193 ILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 250
Query: 174 IFAELANAGRPL 185
+ ++ P
Sbjct: 251 LLYDMVCGDIPF 262
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 303 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 362
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HR+L +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 363 ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 422
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 423 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 471
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E++ ++
Sbjct: 261 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 320
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HR+L +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 321 ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 380
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 381 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 429
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 55/243 (22%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLR----GLAFCH 101
I+ +Y+ +H K+ L+ C + + F + D + +++R + F H
Sbjct: 87 ILDVYENMHHGKRCLLIIMEC-MEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 145
Query: 102 SRNVLHRDLKPQNLLIN---KNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDV 155
S N+ HRD+KP+NLL K+ LKL DFG A+ + CY T +Y P+V
Sbjct: 146 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY-----TPYYVAPEV 200
Query: 156 LFGAKLYTTSIDMWSAGCIFAEL--------ANAGRPLFPGSDVDDQLKRIFKLLGTPTE 207
L G + Y S DMWS G I L +N G+ + PG +KR +L
Sbjct: 201 L-GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG------MKRRIRL------ 247
Query: 208 DTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHI 267
G P+ P S +++ + L++ LL +P +R++ M+H
Sbjct: 248 ----GQYGFPN--------PEWS------EVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289
Query: 268 YFS 270
+ +
Sbjct: 290 WIN 292
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 33/235 (14%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNV 105
+V L+ +E KL L+ ++ + S V+ ++ +++ L H +
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI 180
Query: 106 LHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWYRPPDVLFGAKL-YT 163
++RD+K +N+L++ NG + L DFGL++ F + + T+ Y PD++ G +
Sbjct: 181 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHD 240
Query: 164 TSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFP 223
++D WS G + EL P F + G +L P+P
Sbjct: 241 KAVDWWSLGVLMYELLTGASP--------------FTVDGEKNSQAEISRRILKSEPPYP 286
Query: 224 MYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS-----AEDAMSHIYFSDLN 273
+++A +DL+QRLL+ +P +R+ A++ H++F +N
Sbjct: 287 Q------------EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 329
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E+ ++
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSD 190
+ P+ L K S D+W+ G + E+A G +PG D
Sbjct: 175 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID 215
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 8/174 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E+ ++
Sbjct: 264 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 323
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HR+L +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 324 ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 383
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLL 202
+ P+ L K S D+W+ G + E+A G +PG D L ++++LL
Sbjct: 384 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID----LSQVYELL 432
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 32/220 (14%)
Query: 5 GVDRTPNT-ALAIKGTHLVGNEGVPSSALREICLLKELK-------HKNIVRLYDVLHSE 56
G+D+T +A+K + EG S R L+ ELK H N+V L
Sbjct: 50 GIDKTATXRTVAVK----MLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKP 103
Query: 57 KK-LTLVFEHCD-QDLKKYFDSLNGEI--DLDIVKSFM---------YQLLRGLAFCHSR 103
L ++ E C +L Y S E D+ K F+ +Q+ +G+ F SR
Sbjct: 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASR 163
Query: 104 NVLHRDLKPQNLLINKNGELKLADFGLAR-AFGIP--VKCYSAEVVTLWYRPPDVLFGAK 160
+HRDL +N+L+++ +K+ DFGLAR + P V+ A + W P + +
Sbjct: 164 KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF--DR 221
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+YT D+WS G + E+ + G +PG +D++ R K
Sbjct: 222 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLK 261
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQ-DLKKYFDSLNGEIDLDI- 85
EI ++K+L H N+V +V +KL L E+C+ DL+KY + L
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 122
Query: 86 -VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGEL---KLADFGLARAFGIPVKCY 141
+++ + + L + H ++HRDLKP+N+++ + K+ D G A+ C
Sbjct: 123 PIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC- 181
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFP 187
+ V TL Y P++L K YT ++D WS G + E RP P
Sbjct: 182 TEFVGTLQYLAPELLEQKK-YTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLT------LVFEHCDQ-DLKKYFDSLNGEIDLDI- 85
EI ++K+L H N+V +V +KL L E+C+ DL+KY + L
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 121
Query: 86 -VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGEL---KLADFGLARAFGIPVKCY 141
+++ + + L + H ++HRDLKP+N+++ + K+ D G A+ C
Sbjct: 122 PIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC- 180
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFP 187
+ V TL Y P++L K YT ++D WS G + E RP P
Sbjct: 181 TEFVGTLQYLAPELLEQKK-YTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 55/243 (22%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLR----GLAFCH 101
I+ +Y+ +H K+ L+ C + + F + D + +++R + F H
Sbjct: 68 ILDVYENMHHGKRCLLIIMEC-MEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 126
Query: 102 SRNVLHRDLKPQNLLIN---KNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDV 155
S N+ HRD+KP+NLL K+ LKL DFG A+ + CY T +Y P+V
Sbjct: 127 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY-----TPYYVAPEV 181
Query: 156 LFGAKLYTTSIDMWSAGCIFAEL--------ANAGRPLFPGSDVDDQLKRIFKLLGTPTE 207
L G + Y S DMWS G I L +N G+ + PG +KR +L
Sbjct: 182 L-GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG------MKRRIRL------ 228
Query: 208 DTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHI 267
G P+ P S +++ + L++ LL +P +R++ M+H
Sbjct: 229 ----GQYGFPN--------PEWS------EVSEDAKQLIRLLLKTDPTERLTITQFMNHP 270
Query: 268 YFS 270
+ +
Sbjct: 271 WIN 273
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 109/237 (45%), Gaps = 31/237 (13%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
E+ ++++ H N+V +Y +L +V E + + + ++ + + + +
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSV 150
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
LR L++ H++ V+HRD+K ++L+ +G +KL+DFG V V T ++ P
Sbjct: 151 LRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAP 210
Query: 154 DVLFGAKL-YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPG 212
+V+ ++L Y T +D+WS G + E+ + P F + ++RI D+ P
Sbjct: 211 EVI--SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL-QAMRRI--------RDSLP- 258
Query: 213 MNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
P K K+++ R L +LV P QR +A++ + H +
Sbjct: 259 ----PRVKDL-------------HKVSSVLRGFLDLMLVREPSQRATAQELLGHPFL 298
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
++AIK + E L E ++ + H NI+RL V+ K + +V E+ + L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
+ + + + + + + G+ + +HRDL +N+LIN N K++DFGLA
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
Query: 132 RAF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF 186
R P Y+ ++ W P + + + +T++ D+WS G + E+ + G RP +
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 187 PGSDVD 192
S+ D
Sbjct: 253 EMSNQD 258
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 39/244 (15%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
E +L + H I+R++ +++ ++ ++ + + + K + ++
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV 115
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
L + HS+++++RDLKP+N+L++KNG +K+ DFG A+ +P Y T Y P
Sbjct: 116 CLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKY--VPDVTYXL-CGTPDYIAP 172
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGM 213
+V+ K Y SID WS G + E+ P + + +K K+L
Sbjct: 173 EVV-STKPYNKSIDWWSFGILIYEMLAGYTPFYDS----NTMKTYEKILNAELR------ 221
Query: 214 NLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM-----SAEDAMSHIY 268
F PF +DLL RL+ + QR+ ED +H +
Sbjct: 222 -----FPPF---------------FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261
Query: 269 FSDL 272
F ++
Sbjct: 262 FKEV 265
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 24 NEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEID 82
+E + L+E+ +++ L+H N+++ VL+ +K+L + E+ L+ S++ +
Sbjct: 47 DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP 106
Query: 83 LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA----------- 131
SF + G+A+ HS N++HRDL N L+ +N + +ADFGLA
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166
Query: 132 --RAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
R+ P + VV Y + + Y +D++S G + E+
Sbjct: 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ F S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 123 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
Query: 133 --------------AFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
+PVK + E + + +TT D+WS G + EL
Sbjct: 183 DMLDKEFDSVHNKTGAKLPVKWMALESLQ-----------TQKFTTKSDVWSFGVLLWEL 231
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 232 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 281
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 282 RPSFSELVSRISA 294
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 180
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ F S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 181 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
Query: 133 --------------AFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
+PVK + E + + +TT D+WS G + EL
Sbjct: 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQ-----------TQKFTTKSDVWSFGVLLWEL 289
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 290 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 339
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 340 RPSFSELVSRISA 352
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ F S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 122 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 133 --------------AFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
+PVK + E + + +TT D+WS G + EL
Sbjct: 182 DMYDKEFDSVHNKTGAKLPVKWMALESLQ-----------TQKFTTKSDVWSFGVLLWEL 230
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 231 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 280
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 281 RPSFSELVSRISA 293
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 10/219 (4%)
Query: 5 GVDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
G+D +AIK L E +EI +L + I R + KL ++ E
Sbjct: 38 GIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIME 97
Query: 65 HCDQDLKKYFDSLN-GEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGEL 123
+ D L G ++ + + + ++L+GL + HS +HRD+K N+L+++ G++
Sbjct: 98 YLGGG--SALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDV 155
Query: 124 KLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR 183
KLADFG+A + V T ++ P+V+ Y D+WS G ELA G
Sbjct: 156 KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDFKADIWSLGITAIELAK-GE 213
Query: 184 PLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPF 222
P P SD+ R+ L+ + T G + P FK F
Sbjct: 214 P--PNSDLHPM--RVLFLIPKNSPPTLEGQHSKP-FKEF 247
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ F S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 122 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 133 --------------AFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
+PVK + E + + +TT D+WS G + EL
Sbjct: 182 DMYDKEFDSVHNKTGAKLPVKWMALESLQ-----------TQKFTTKSDVWSFGVLLWEL 230
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 231 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 280
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 281 RPSFSELVSRISA 293
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ F S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 123 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
Query: 133 --------------AFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
+PVK + E + + +TT D+WS G + EL
Sbjct: 183 DMYDKEFDSVHNKTGAKLPVKWMALESLQ-----------TQKFTTKSDVWSFGVLLWEL 231
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 232 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 281
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 282 RPSFSELVSRISA 294
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 34 EICLLKELKH--KNIVRLYDVLHSEKKLTLVFEHCD--QDLKKYFDSLNGEIDLDIVKSF 89
E+ LLK++ ++RL D L+ E + QDL + G + ++ +SF
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSF 162
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFGLARAFGIPVKCYSAEVVTL 148
+Q+L + CH+ VLHRD+K +N+LI+ N GELKL DFG V Y+ T
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTR 220
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPL 185
Y PP+ + + + S +WS G + ++ P
Sbjct: 221 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ F S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 120 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
Query: 133 --------------AFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
+PVK + E + + +TT D+WS G + EL
Sbjct: 180 DMYDKEFDSVHNKTGAKLPVKWMALESLQ-----------TQKFTTKSDVWSFGVLLWEL 228
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 229 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 278
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 279 RPSFSELVSRISA 291
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 2/167 (1%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
EI + K L + ++V + + + +V E C + + + FM Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
++G+ + H+ V+HRDLK NL +N + ++K+ DFGLA + T Y P
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAP 211
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+VL K ++ +D+WS GCI L G+P F S + + RI K
Sbjct: 212 EVLC-KKGHSFEVDIWSLGCILYTLL-VGKPPFETSCLKETYIRIKK 256
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 34/186 (18%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDS--------------- 76
RE LL L+H++IV+ Y V L +VFE+ DL K+ +
Sbjct: 66 REAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQ 125
Query: 77 LNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGI 136
GE+ L + Q+ G+ + S++ +HRDL +N L+ N +K+ DFG++R
Sbjct: 126 AKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR---- 181
Query: 137 PVKCYSAEVVTL---------WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR-PLF 186
YS + + W P +++ + +TT D+WS G I E+ G+ P F
Sbjct: 182 --DVYSTDYYRVGGHTMLPIRWMPPESIMY--RKFTTESDVWSFGVILWEIFTYGKQPWF 237
Query: 187 PGSDVD 192
S+ +
Sbjct: 238 QLSNTE 243
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 126
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ F S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 127 FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
Query: 133 --------------AFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
+PVK + E + + +TT D+WS G + EL
Sbjct: 187 DMYDKEFDSVHNKTGAKLPVKWMALESLQ-----------TQKFTTKSDVWSFGVLLWEL 235
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 236 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 285
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 286 RPSFSELVSRISA 298
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 6 VDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELK-HKNIVRLYDVLHSEKKLTLVFE 64
V + N A A+K + ++ + ++ +EI LK + H NIV+L++V H + LV E
Sbjct: 31 VHKKSNQAFAVK----IISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVME 86
Query: 65 HCDQDLKKYFDSLNGEIDLDIVKS--FMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NK 119
+ + F+ + + ++ M +L+ ++ H V+HRDLKP+NLL N
Sbjct: 87 LLNGG--ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEND 144
Query: 120 NGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELA 179
N E+K+ DFG AR + TL Y P++L Y S D+WS G I +
Sbjct: 145 NLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL-NQNGYDESCDLWSLGVILYTML 203
Query: 180 NAGRPL 185
+ P
Sbjct: 204 SGQVPF 209
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E+ ++
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSD 190
+ P+ L K S D+W+ G + E+A G +PG D
Sbjct: 175 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID 215
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 22/145 (15%)
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT 147
SF YQ+ +G+AF S+N +HRDL +N+L+ K+ DFGLAR +K S VV
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR----DIKNDSNYVVK 220
Query: 148 ------LWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ + P+ +F +YT D+WS G EL + G +PG VD + ++ K
Sbjct: 221 GNARLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK- 278
Query: 202 LGTPTEDTWPGMNLL-PDFKPFPMY 225
G +L P+ P MY
Sbjct: 279 ---------EGFRMLSPEHAPAEMY 294
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLN-GEIDLDIVKSF 89
L+E ++KE+KH N+V+L V E ++ E +L Y N E+ ++
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYSAEVVTL 148
Q+ + + +N +HRDL +N L+ +N +K+ADFGL+R G ++ +
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI 174
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSD 190
+ P+ L K S D+W+ G + E+A G +PG D
Sbjct: 175 KWTAPESLAYNKFSIKS-DVWAFGVLLWEIATYGMSPYPGID 215
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 2/167 (1%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
EI + K L + ++V + + + +V E C + + + FM Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
++G+ + H+ V+HRDLK NL +N + ++K+ DFGLA + T Y P
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAP 211
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+VL K ++ +D+WS GCI L G+P F S + + RI K
Sbjct: 212 EVLC-KKGHSFEVDIWSLGCILYTLL-VGKPPFETSCLKETYIRIKK 256
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 22/145 (15%)
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT 147
SF YQ+ +G+AF S+N +HRDL +N+L+ K+ DFGLAR +K S VV
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARH----IKNDSNYVVK 227
Query: 148 ------LWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ + P+ +F +YT D+WS G EL + G +PG VD + ++ K
Sbjct: 228 GNARLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK- 285
Query: 202 LGTPTEDTWPGMNLL-PDFKPFPMY 225
G +L P+ P MY
Sbjct: 286 ---------EGFRMLSPEHAPAEMY 301
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 22/145 (15%)
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT 147
SF YQ+ +G+AF S+N +HRDL +N+L+ K+ DFGLAR +K S VV
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR----DIKNDSNYVVK 222
Query: 148 ------LWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ + P+ +F +YT D+WS G EL + G +PG VD + ++ K
Sbjct: 223 GNARLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK- 280
Query: 202 LGTPTEDTWPGMNLL-PDFKPFPMY 225
G +L P+ P MY
Sbjct: 281 ---------EGFRMLSPEHAPAEMY 296
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 58/251 (23%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +L+++ H N++ L+DV + + L+ E + FD L + L + SF+
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGG--ELFDFLAQKESLSEEEATSFI 121
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + H++ + H DLKP+N +L++KN +KL DFGLA FG
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 182 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 217
Query: 197 RIFKLLGTPTEDTWPGMNLLP-DFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
LG ++T + + DF FSQ + +D +++LLV
Sbjct: 218 ----FLGDTKQETLANITAVSYDF-------DEEFFSQT----SELAKDFIRKLLVKETR 262
Query: 256 QRMSAEDAMSH 266
+R++ ++A+ H
Sbjct: 263 KRLTIQEALRH 273
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 22/145 (15%)
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT 147
SF YQ+ +G+AF S+N +HRDL +N+L+ K+ DFGLAR +K S VV
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR----DIKNDSNYVVK 204
Query: 148 ------LWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ + P+ +F +YT D+WS G EL + G +PG VD + ++ K
Sbjct: 205 GNARLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK- 262
Query: 202 LGTPTEDTWPGMNLL-PDFKPFPMY 225
G +L P+ P MY
Sbjct: 263 ---------EGFRMLSPEHAPAEMY 278
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 49 LYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHR 108
L L S++ + ++ +DL K F + L+ + + +Q+ +G+ F SR +HR
Sbjct: 121 LSTYLRSKRNEFVPYKEAPEDLYKDF------LTLEHLICYSFQVAKGMEFLASRKCIHR 174
Query: 109 DLKPQNLLINKNGELKLADFGLAR-AFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTS 165
DL +N+L+++ +K+ DFGLAR + P V+ A + W P + ++YT
Sbjct: 175 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF--DRVYTIQ 232
Query: 166 IDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
D+WS G + E+ + G +PG +D++ R K
Sbjct: 233 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 267
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 22/145 (15%)
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT 147
SF YQ+ +G+AF S+N +HRDL +N+L+ K+ DFGLAR +K S VV
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR----DIKNDSNYVVK 227
Query: 148 ------LWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+ + P+ +F +YT D+WS G EL + G +PG VD + ++ K
Sbjct: 228 GNARLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK- 285
Query: 202 LGTPTEDTWPGMNLL-PDFKPFPMY 225
G +L P+ P MY
Sbjct: 286 ---------EGFRMLSPEHAPAEMY 301
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 58/251 (23%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +L+++ H N++ L+DV + + L+ E + FD L + L + SF+
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGG--ELFDFLAQKESLSEEEATSFI 121
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + H++ + H DLKP+N +L++KN +KL DFGLA FG
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 182 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 217
Query: 197 RIFKLLGTPTEDTWPGMNLLP-DFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
LG ++T + + DF H S +D +++LLV
Sbjct: 218 ----FLGDTKQETLANITSVSYDFDEEFFSHTS-----------ELAKDFIRKLLVKETR 262
Query: 256 QRMSAEDAMSH 266
+R++ ++A+ H
Sbjct: 263 KRLTIQEALRH 273
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 58/255 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +L+++ H N++ L+DV + + L+ E + FD L + L + SF+
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGG--ELFDFLAQKESLSEEEATSFI 121
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + H++ + H DLKP+N +L++KN +KL DFGLA FG
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 182 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 217
Query: 197 RIFKLLGTPTEDTWPGMNLLP-DFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
LG ++T + + DF FSQ + +D +++LLV
Sbjct: 218 ----FLGDTKQETLANITAVSYDF-------DEEFFSQT----SELAKDFIRKLLVKETR 262
Query: 256 QRMSAEDAMSHIYFS 270
+R++ ++A+ H + +
Sbjct: 263 KRLTIQEALRHPWIT 277
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ + S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 121 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
Query: 133 AFGIPVKCYSAEVVTLWYRPPDVLFGAKL--------------YTTSIDMWSAGCIFAEL 178
Y E ++ + GAKL +TT D+WS G + EL
Sbjct: 181 DM------YDKEXXSVHNKT-----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 229
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 230 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 279
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 280 RPSFSELVSRISA 292
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKH-KNIVRLYDVLHS------EKKLTLVFEHCD 67
AIK + G+E +EI +LK+ H +NI Y + +L LV E C
Sbjct: 53 AIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCG 110
Query: 68 ----QDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGEL 123
DL K ++ + + + ++LRGL+ H V+HRD+K QN+L+ +N E+
Sbjct: 111 AGSVTDLIK--NTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEV 168
Query: 124 KLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAK----LYTTSIDMWSAGCIFAELA 179
KL DFG++ V + + T ++ P+V+ + Y D+WS G E+A
Sbjct: 169 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228
Query: 180 NAGRPL 185
PL
Sbjct: 229 EGAPPL 234
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 30/224 (13%)
Query: 5 GVDRTP-NTALAIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLTLV 62
G+ +T + +A+K + + + E+ ++ +L H+NIV L + L+
Sbjct: 68 GISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLI 127
Query: 63 FEHC-DQDLKKYFDS-----------------LNGEIDLDIVK-----SFMYQLLRGLAF 99
FE+C DL Y S L E DL+++ F YQ+ +G+ F
Sbjct: 128 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEF 187
Query: 100 CHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVL 156
++ +HRDL +N+L+ +K+ DFGLAR V +A + W P +
Sbjct: 188 LEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF 247
Query: 157 FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
G +YT D+WS G + E+ + G +PG VD ++ +
Sbjct: 248 EG--IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ 289
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 32/220 (14%)
Query: 5 GVDRTPNT-ALAIKGTHLVGNEGVPSSALREICLLKELK-------HKNIVRLYDVLHSE 56
G+D+T +A+K + EG S R L+ ELK H N+V L
Sbjct: 50 GIDKTATXRTVAVK----MLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKP 103
Query: 57 KK-LTLVFEHCD-QDLKKYFDSLNGEI--DLDIVKSFM---------YQLLRGLAFCHSR 103
L ++ E C +L Y S E D+ K F+ +Q+ +G+ F SR
Sbjct: 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASR 163
Query: 104 NVLHRDLKPQNLLINKNGELKLADFGLAR-AFGIP--VKCYSAEVVTLWYRPPDVLFGAK 160
+HRDL +N+L+++ +K+ DFGLAR + P V+ A + W P + +
Sbjct: 164 KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF--DR 221
Query: 161 LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+YT D+WS G + E+ + G +PG +D++ R K
Sbjct: 222 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 261
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 58/251 (23%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +L+++ H N++ L+DV + + L+ E + FD L + L + SF+
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGG--ELFDFLAQKESLSEEEATSFI 121
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + H++ + H DLKP+N +L++KN +KL DFGLA FG
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 182 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 217
Query: 197 RIFKLLGTPTEDTWPGMNLLP-DFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
LG ++T + + DF H S +D +++LLV
Sbjct: 218 ----FLGDTKQETLANITSVSYDFDEEFFSHTS-----------ELAKDFIRKLLVKETR 262
Query: 256 QRMSAEDAMSH 266
+R++ ++A+ H
Sbjct: 263 KRLTIQEALRH 273
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 80 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 139
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ + S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 140 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
Query: 133 AFGIPVKCYSAEVVTLWYRPPDVLFGAKL--------------YTTSIDMWSAGCIFAEL 178
Y E ++ + GAKL +TT D+WS G + EL
Sbjct: 200 DM------YDKEYYSVHNKT-----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 248
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 249 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 298
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 299 RPSFSELVSRISA 311
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 39/244 (15%)
Query: 36 CLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY--QL 93
LLK +KH +V L+ + KL V ++ + + F L E ++ Y ++
Sbjct: 91 VLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG--ELFYHLQRERCFLEPRARFYAAEI 148
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
L + HS N+++RDLKP+N+L++ G + L DFGL + S T Y P
Sbjct: 149 ASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAP 208
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGM 213
+VL + Y ++D W G + E+ G P F + + I
Sbjct: 209 EVLH-KQPYDRTVDWWCLGAVLYEML-YGLPPFYSRNTAEMYDNILN------------- 253
Query: 214 NLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAM----SHIYF 269
KP Q+ P +T R LL+ LL + +R+ A+D SH++F
Sbjct: 254 ------KPL----------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFF 297
Query: 270 SDLN 273
S +N
Sbjct: 298 SLIN 301
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 38/248 (15%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDI----VKSF 89
EI +L H IV+L + + KL ++ E C D++ E+D + ++
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGA---VDAIMLELDRGLTEPQIQVV 114
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW 149
Q+L L F HS+ ++HRDLK N+L+ G+++LADFG++ ++ + + T +
Sbjct: 115 CRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY 174
Query: 150 YRPPDVLFGAKL----YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
+ P+V+ + Y D+WS G E+A P +L + LL
Sbjct: 175 WMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP-------HHELNPMRVLLKIA 227
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMS 265
D P + PS K + + RD L+ L NP R SA +
Sbjct: 228 KSD------------PPTLLTPS--------KWSVEFRDFLKIALDKNPETRPSAAQLLE 267
Query: 266 HIYFSDLN 273
H + S +
Sbjct: 268 HPFVSSIT 275
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
++AIK + E L E ++ + H NI+RL V+ K + +V E+ + L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
+ + + + + + + G+ + +HRDL +N+LIN N K++DFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 132 RAF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF 186
R P Y+ ++ W P + + + +T++ D+WS G + E+ + G RP +
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 187 PGSDVD 192
S+ D
Sbjct: 253 EMSNQD 258
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ + S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 122 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 133 AFGIPVKCYSAEVVTLWYRPPDVLFGAKL--------------YTTSIDMWSAGCIFAEL 178
Y E ++ + GAKL +TT D+WS G + EL
Sbjct: 182 DM------YDKEYYSVHNKT-----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 231 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 280
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 281 RPSFSELVSRISA 293
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 2/167 (1%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
EI + K L + ++V + + + +V E C + + + FM Q
Sbjct: 92 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 151
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
++G+ + H+ V+HRDLK NL +N + ++K+ DFGLA + T Y P
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAP 211
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+VL K ++ +D+WS GCI L G+P F S + + RI K
Sbjct: 212 EVLC-KKGHSFEVDIWSLGCILYTLL-VGKPPFETSCLKETYIRIKK 256
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
++AIK + E L E ++ + H NI+RL V+ K + +V E+ + L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
+ + + + + + + G+ + +HRDL +N+LIN N K++DFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 132 RAF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF 186
R P Y+ ++ W P + + + +T++ D+WS G + E+ + G RP +
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 187 PGSDVD 192
S+ D
Sbjct: 253 EMSNQD 258
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
++AIK + E L E ++ + H NI+RL V+ K + +V E+ + L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
+ + + + + + + G+ + +HRDL +N+LIN N K++DFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 132 RAF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF 186
R P Y+ ++ W P + + + +T++ D+WS G + E+ + G RP +
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 187 PGSDVD 192
S+ D
Sbjct: 253 EMSNQD 258
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
++AIK + E L E ++ + H NI+RL V+ K + +V E+ + L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
+ + + + + + + G+ + +HRDL +N+LIN N K++DFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 132 RAF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF 186
R P Y+ ++ W P + + + +T++ D+WS G + E+ + G RP +
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 187 PGSDVD 192
S+ D
Sbjct: 253 EMSNQD 258
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 113
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ + S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 114 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
Query: 133 --------------AFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
+PVK + E + + +TT D+WS G + EL
Sbjct: 174 DMYDKEYYSVHNKTGAKLPVKWMALESLQ-----------TQKFTTKSDVWSFGVLLWEL 222
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 223 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 272
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 273 RPSFSELVSRISA 285
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
++AIK + E L E ++ + H NI+RL V+ K + +V E+ + L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
+ + + + + + + G+ + +HRDL +N+LIN N K++DFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 132 RAF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF 186
R P Y+ ++ W P + + + +T++ D+WS G + E+ + G RP +
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 187 PGSDVD 192
S+ D
Sbjct: 253 EMSNQD 258
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 81 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 140
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ + S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 141 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
Query: 133 AFGIPVKCYSAEVVTLWYRPPDVLFGAKL--------------YTTSIDMWSAGCIFAEL 178
Y E ++ + GAKL +TT D+WS G + EL
Sbjct: 201 DM------YDKEYYSVHNKT-----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 249
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 250 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 299
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 300 RPSFSELVSRISA 312
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 38/248 (15%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDI----VKSF 89
EI +L H IV+L + + KL ++ E C D++ E+D + ++
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGA---VDAIMLELDRGLTEPQIQVV 122
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW 149
Q+L L F HS+ ++HRDLK N+L+ G+++LADFG++ ++ + + T +
Sbjct: 123 CRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY 182
Query: 150 YRPPDVLFGAKL----YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
+ P+V+ + Y D+WS G E+A P +L + LL
Sbjct: 183 WMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP-------HHELNPMRVLLKIA 235
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMS 265
D P + PS K + + RD L+ L NP R SA +
Sbjct: 236 KSD------------PPTLLTPS--------KWSVEFRDFLKIALDKNPETRPSAAQLLE 275
Query: 266 HIYFSDLN 273
H + S +
Sbjct: 276 HPFVSSIT 283
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVK--S 88
LRE+ ++K L+H NIV + L++V E+ + L + LD + S
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 89 FMYQLLRGLAFCHSRN--VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
Y + +G+ + H+RN ++HRDLK NLL++K +K+ DFGL+R
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAG 201
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRP 184
T + P+VL S D++S G I ELA +P
Sbjct: 202 TPEWMAPEVLRDEPSNEKS-DVYSFGVILWELATLQQP 238
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
++AIK + E L E ++ + H NI+RL V+ K + +V E+ + L
Sbjct: 73 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 132
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
+ + + + + + + G+ + +HRDL +N+LIN N K++DFGL+
Sbjct: 133 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 192
Query: 132 RAF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF 186
R P Y+ ++ W P + + + +T++ D+WS G + E+ + G RP +
Sbjct: 193 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYW 250
Query: 187 PGSDVD 192
S+ D
Sbjct: 251 EMSNQD 256
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 58/251 (23%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +L+++ H N++ L+DV + + L+ E + FD L + L + SF+
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGG--ELFDFLAQKESLSEEEATSFI 121
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + H++ + H DLKP+N +L++KN +KL DFGLA FG
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 182 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 217
Query: 197 RIFKLLGTPTEDTWPGMNLLP-DFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
LG ++T + + DF H S +D +++LLV
Sbjct: 218 ----FLGDTKQETLANITSVSYDFDEEFFSHTS-----------ELAKDFIRKLLVKETR 262
Query: 256 QRMSAEDAMSH 266
+R++ ++A+ H
Sbjct: 263 KRLTIQEALRH 273
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ + S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 119 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
Query: 133 AFGIPVKCYSAEVVTLWYRPPDVLFGAKL--------------YTTSIDMWSAGCIFAEL 178
Y E ++ + GAKL +TT D+WS G + EL
Sbjct: 179 DM------YDKEYYSVHNKT-----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 227
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 228 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 277
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 278 RPSFSELVSRISA 290
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 2/167 (1%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
EI + K L + ++V + + + +V E C + + + FM Q
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 135
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
++G+ + H+ V+HRDLK NL +N + ++K+ DFGLA + T Y P
Sbjct: 136 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAP 195
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+VL K ++ +D+WS GCI L G+P F S + + RI K
Sbjct: 196 EVL-CKKGHSFEVDIWSLGCILYTLL-VGKPPFETSCLKETYIRIKK 240
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ + S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 121 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
Query: 133 AFGIPVKCYSAEVVTLWYRPPDVLFGAKL--------------YTTSIDMWSAGCIFAEL 178
Y E ++ + GAKL +TT D+WS G + EL
Sbjct: 181 DM------YDKEYYSVHNKT-----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 229
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 230 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 279
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 280 RPSFSELVSRISA 292
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ + S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 122 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
Query: 133 AFGIPVKCYSAEVVTLWYRPPDVLFGAKL--------------YTTSIDMWSAGCIFAEL 178
Y E ++ + GAKL +TT D+WS G + EL
Sbjct: 182 DM------YDKEYYSVHNKT-----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 231 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 280
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 281 RPSFSELVSRISA 293
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y ID + +
Sbjct: 61 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 120
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HR+L +N+L+ +K+ DFGL + + Y E
Sbjct: 121 TSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGES 180
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 181 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 211
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLA----FCH 101
IV +Y+ L++ +K L+ C D + F + D + ++++ + + H
Sbjct: 90 IVDVYENLYAGRKCLLIVMEC-LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 148
Query: 102 SRNVLHRDLKPQNLLINK---NGELKLADFGLARAF----GIPVKCYSAEVVTLWYRPPD 154
S N+ HRD+KP+NLL N LKL DFG A+ + CY T +Y P+
Sbjct: 149 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-----TPYYVAPE 203
Query: 155 VLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN 214
VL G + Y S DMWS G I L P + + PGM
Sbjct: 204 VL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------------PGMK 246
Query: 215 LLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ P+ +S+V+ ++ + L++ LL P QRM+ + M+H
Sbjct: 247 TRIRMGQYEF--PNPEWSEVSEEV----KMLIRNLLKTEPTQRMTITEFMNH 292
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
++AIK + E L E ++ + H NI+RL V+ K + +V E+ + L
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 105
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
+ + + + + + + G+ + +HRDL +N+LIN N K++DFGL+
Sbjct: 106 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Query: 132 RAF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF 186
R P Y+ ++ W P + + + +T++ D+WS G + E+ + G RP +
Sbjct: 166 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYW 223
Query: 187 PGSDVD 192
S+ D
Sbjct: 224 EMSNQD 229
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
++AIK + E L E ++ + H NI+RL V+ K + +V E+ + L
Sbjct: 63 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 122
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
+ + + + + + + G+ + +HRDL +N+LIN N K++DFGL+
Sbjct: 123 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
Query: 132 RAF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF 186
R P Y+ ++ W P + + + +T++ D+WS G + E+ + G RP +
Sbjct: 183 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYW 240
Query: 187 PGSDVD 192
S+ D
Sbjct: 241 EMSNQD 246
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 58/255 (22%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDL--DIVKSFM 90
RE+ +L+++ H NI+ L+DV + + L+ E + FD L + L + SF+
Sbjct: 64 REVSILRQVLHPNIITLHDVYENRTDVVLILELVSGG--ELFDFLAQKESLSEEEATSFI 121
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQN-LLINKN---GELKLADFGLARA----------FGI 136
Q+L G+ + H++ + H DLKP+N +L++KN +KL DFGLA FG
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 137 PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
P + + E+V Y P + DMWS G I L + P
Sbjct: 182 P-EFVAPEIVN--YEPLGL---------EADMWSIGVITYILLSGASP------------ 217
Query: 197 RIFKLLGTPTEDTWPGMNLLP-DFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
LG ++T + + DF FSQ + +D +++LLV
Sbjct: 218 ----FLGDTKQETLANITAVSYDF-------DEEFFSQTSE----LAKDFIRKLLVKETR 262
Query: 256 QRMSAEDAMSHIYFS 270
+R++ ++A+ H + +
Sbjct: 263 KRLTIQEALRHPWIT 277
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y ID + +
Sbjct: 60 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + + E
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGES 179
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 180 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 210
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ + S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 120 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
Query: 133 AFGIPVKCYSAEVVTLWYRPPDVLFGAKL--------------YTTSIDMWSAGCIFAEL 178
Y E ++ + GAKL +TT D+WS G + EL
Sbjct: 180 DM------YDKEYYSVHNKT-----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 228
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 229 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 278
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 279 RPSFSELVSRISA 291
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 48/253 (18%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDV-LHSEKKLTLVFEHCDQ-DLKK 72
A+K + + + G S L E ++K+ H N++ L + L SE +V + DL+
Sbjct: 57 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 116
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ + + + F Q+ +G+ + S+ +HRDL +N ++++ +K+ADFGLAR
Sbjct: 117 FIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
Query: 133 AFGIPVKCYSAEVVTLWYRPPDVLFGAKL--------------YTTSIDMWSAGCIFAEL 178
Y E ++ + GAKL +TT D+WS G + EL
Sbjct: 177 DM------YDKEYYSVHNKT-----GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 225
Query: 179 ANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMY-------HPSM-- 229
G P +P DV+ ++ L G L P++ P P+Y HP
Sbjct: 226 MTRGAPPYP--DVNTFDITVYLLQGRRL--------LQPEYCPDPLYEVMLKCWHPKAEM 275
Query: 230 --SFSQVAPKLTA 240
SFS++ +++A
Sbjct: 276 RPSFSELVSRISA 288
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 8/186 (4%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
++AIK + E L E ++ + H NI+RL V+ K + +V E+ + L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
+ + + + + + + G+ + +HRDL +N+LIN N K++DFGL
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLG 194
Query: 132 RAF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF 186
R P Y+ ++ W P + + + +T++ D+WS G + E+ + G RP +
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 187 PGSDVD 192
S+ D
Sbjct: 253 EMSNQD 258
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLA----FCH 101
IV +Y+ L++ +K L+ C D + F + D + ++++ + + H
Sbjct: 76 IVDVYENLYAGRKCLLIVMEC-LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 102 SRNVLHRDLKPQNLLINK---NGELKLADFGLARAF----GIPVKCYSAEVVTLWYRPPD 154
S N+ HRD+KP+NLL N LKL DFG A+ + CY T +Y P+
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-----TPYYVAPE 189
Query: 155 VLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN 214
VL G + Y S DMWS G I L P + + PGM
Sbjct: 190 VL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------------PGMK 232
Query: 215 LLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ P+ +S+V+ ++ + L++ LL P QRM+ + M+H
Sbjct: 233 TRIRMGQYEF--PNPEWSEVSEEV----KMLIRNLLKTEPTQRMTITEFMNH 278
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT----LVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
RE L H IV +YD +E +V E+ D + G +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAEV 145
+ + L F H ++HRD+KP N+LI+ +K+ DFG+ARA G V +A +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVI 180
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG 188
T Y P+ G + S D++S GC+ E+ G P F G
Sbjct: 181 GTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLT-GEPPFTG 221
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 40/232 (17%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLA----FCH 101
IV +Y+ L++ +K L+ C D + F + D + ++++ + + H
Sbjct: 82 IVDVYENLYAGRKCLLIVMEC-LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 140
Query: 102 SRNVLHRDLKPQNLLINK---NGELKLADFGLARAF----GIPVKCYSAEVVTLWYRPPD 154
S N+ HRD+KP+NLL N LKL DFG A+ + CY T +Y P+
Sbjct: 141 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-----TPYYVAPE 195
Query: 155 VLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN 214
VL G + Y S DMWS G I L P + + PGM
Sbjct: 196 VL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------------PGMK 238
Query: 215 LLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ +P S +++ + + L++ LL P QRM+ + M+H
Sbjct: 239 TRIRMGQYEFPNPEWS------EVSEEVKMLIRNLLKTEPTQRMTITEFMNH 284
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 40/232 (17%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLA----FCH 101
IV +Y+ L++ +K L+ C D + F + D + ++++ + + H
Sbjct: 81 IVDVYENLYAGRKCLLIVMEC-LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 139
Query: 102 SRNVLHRDLKPQNLLINK---NGELKLADFGLARAF----GIPVKCYSAEVVTLWYRPPD 154
S N+ HRD+KP+NLL N LKL DFG A+ + CY T +Y P+
Sbjct: 140 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-----TPYYVAPE 194
Query: 155 VLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN 214
VL G + Y S DMWS G I L P + + PGM
Sbjct: 195 VL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------------PGMK 237
Query: 215 LLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ +P S +++ + + L++ LL P QRM+ + M+H
Sbjct: 238 TRIRMGQYEFPNPEWS------EVSEEVKMLIRNLLKTEPTQRMTITEFMNH 283
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY-- 91
EI +L H NIV+L D + E L ++ E C D++ E++ + +S +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFC---AGGAVDAVMLELERPLTESQIQVV 140
Query: 92 --QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW 149
Q L L + H ++HRDLK N+L +G++KLADFG++ ++ + + T +
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPY 200
Query: 150 YRPPDVLF----GAKLYTTSIDMWSAGCIFAELANAGRP 184
+ P+V+ + Y D+WS G E+A P
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLA----FCH 101
IV +Y+ L++ +K L+ C D + F + D + ++++ + + H
Sbjct: 120 IVDVYENLYAGRKCLLIVMEC-LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 178
Query: 102 SRNVLHRDLKPQNLLINK---NGELKLADFGLARAF----GIPVKCYSAEVVTLWYRPPD 154
S N+ HRD+KP+NLL N LKL DFG A+ + CY T +Y P+
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-----TPYYVAPE 233
Query: 155 VLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN 214
VL G + Y S DMWS G I L P + + PGM
Sbjct: 234 VL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------------PGMK 276
Query: 215 LLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ P+ +S+V+ ++ + L++ LL P QRM+ + M+H
Sbjct: 277 TRIRMGQYEF--PNPEWSEVSEEV----KMLIRNLLKTEPTQRMTITEFMNH 322
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLA----FCH 101
IV +Y+ L++ +K L+ C D + F + D + ++++ + + H
Sbjct: 75 IVDVYENLYAGRKCLLIVMEC-LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 133
Query: 102 SRNVLHRDLKPQNLLINK---NGELKLADFGLARAF----GIPVKCYSAEVVTLWYRPPD 154
S N+ HRD+KP+NLL N LKL DFG A+ + CY T +Y P+
Sbjct: 134 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-----TPYYVAPE 188
Query: 155 VLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN 214
VL G + Y S DMWS G I L P + + PGM
Sbjct: 189 VL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------------PGMK 231
Query: 215 LLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ P+ +S+V+ ++ + L++ LL P QRM+ + M+H
Sbjct: 232 TRIRMGQYEF--PNPEWSEVSEEV----KMLIRNLLKTEPTQRMTITEFMNH 277
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 40/232 (17%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLA----FCH 101
IV +Y+ L++ +K L+ C D + F + D + ++++ + + H
Sbjct: 80 IVDVYENLYAGRKCLLIVMEC-LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 138
Query: 102 SRNVLHRDLKPQNLLINK---NGELKLADFGLARAF----GIPVKCYSAEVVTLWYRPPD 154
S N+ HRD+KP+NLL N LKL DFG A+ + CY T +Y P+
Sbjct: 139 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-----TPYYVAPE 193
Query: 155 VLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN 214
VL G + Y S DMWS G I L P + + PGM
Sbjct: 194 VL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------------PGMK 236
Query: 215 LLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ +P S +++ + + L++ LL P QRM+ + M+H
Sbjct: 237 TRIRMGQYEFPNPEWS------EVSEEVKMLIRNLLKTEPTQRMTITEFMNH 282
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLA----FCH 101
IV +Y+ L++ +K L+ C D + F + D + ++++ + + H
Sbjct: 76 IVDVYENLYAGRKCLLIVMEC-LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 102 SRNVLHRDLKPQNLLINK---NGELKLADFGLARAF----GIPVKCYSAEVVTLWYRPPD 154
S N+ HRD+KP+NLL N LKL DFG A+ + CY T +Y P+
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-----TPYYVAPE 189
Query: 155 VLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN 214
VL G + Y S DMWS G I L P + + PGM
Sbjct: 190 VL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------------PGMK 232
Query: 215 LLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ P+ +S+V+ ++ + L++ LL P QRM+ + M+H
Sbjct: 233 TRIRMGQYEF--PNPEWSEVSEEV----KMLIRNLLKTEPTQRMTITEFMNH 278
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLA----FCH 101
IV +Y+ L++ +K L+ C D + F + D + ++++ + + H
Sbjct: 74 IVDVYENLYAGRKCLLIVMEC-LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 102 SRNVLHRDLKPQNLLINK---NGELKLADFGLARAF----GIPVKCYSAEVVTLWYRPPD 154
S N+ HRD+KP+NLL N LKL DFG A+ + CY T +Y P+
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-----TPYYVAPE 187
Query: 155 VLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN 214
VL G + Y S DMWS G I L P + + PGM
Sbjct: 188 VL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------------PGMK 230
Query: 215 LLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ P+ +S+V+ ++ + L++ LL P QRM+ + M+H
Sbjct: 231 TRIRMGQYEF--PNPEWSEVSEEV----KMLIRNLLKTEPTQRMTITEFMNH 276
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLA----FCH 101
IV +Y+ L++ +K L+ C D + F + D + ++++ + + H
Sbjct: 126 IVDVYENLYAGRKCLLIVMEC-LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 184
Query: 102 SRNVLHRDLKPQNLLINK---NGELKLADFGLARAF----GIPVKCYSAEVVTLWYRPPD 154
S N+ HRD+KP+NLL N LKL DFG A+ + CY T +Y P+
Sbjct: 185 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-----TPYYVAPE 239
Query: 155 VLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN 214
VL G + Y S DMWS G I L P + + PGM
Sbjct: 240 VL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------------PGMK 282
Query: 215 LLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
+ P+ +S+V+ ++ + L++ LL P QRM+ + M+H
Sbjct: 283 TRIRMGQYEF--PNPEWSEVSEEV----KMLIRNLLKTEPTQRMTITEFMNH 328
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 39/205 (19%)
Query: 10 PNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ- 68
P T +A+K + + + RE L+ E + NIV+L V K + L+FE+
Sbjct: 76 PFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYG 135
Query: 69 DLKKYFDSLNGEIDLDIVKS-----------------------FMYQLLRGLAFCHSRNV 105
DL ++ S++ + S Q+ G+A+ R
Sbjct: 136 DLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF 195
Query: 106 LHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA--------EVVTLWYRPPDVLF 157
+HRDL +N L+ +N +K+ADFGL+R YSA + + + + PP+ +F
Sbjct: 196 VHRDLATRNCLVGENMVVKIADFGLSR------NIYSADYYKADGNDAIPIRWMPPESIF 249
Query: 158 GAKLYTTSIDMWSAGCIFAELANAG 182
+ YTT D+W+ G + E+ + G
Sbjct: 250 YNR-YTTESDVWAYGVVLWEIFSYG 273
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVK--S 88
LRE+ ++K L+H NIV + L++V E+ + L + LD + S
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 89 FMYQLLRGLAFCHSRN--VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV 146
Y + +G+ + H+RN ++HR+LK NLL++K +K+ DFGL+R +
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAG 201
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRP 184
T + P+VL S D++S G I ELA +P
Sbjct: 202 TPEWMAPEVLRDEPSNEKS-DVYSFGVILWELATLQQP 238
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 99/222 (44%), Gaps = 34/222 (15%)
Query: 5 GVDRTPNT-ALAIKGTHLVGNEGVPSSALREICLLKELK-------HKNIVRLYDVLHSE 56
G+D+T +A+K + EG S R L+ ELK H N+V L
Sbjct: 52 GIDKTATXRTVAVK----MLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKP 105
Query: 57 KK-LTLVFEHCD-QDLKKYFDSLNGEI----DLDIVKSFM---------YQLLRGLAFCH 101
L ++ E C +L Y S E D+ K F+ +Q+ +G+ F
Sbjct: 106 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLA 165
Query: 102 SRNVLHRDLKPQNLLINKNGELKLADFGLARAFGI---PVKCYSAEVVTLWYRPPDVLFG 158
SR +HRDL +N+L+++ +K+ DFGLAR V+ A + W P +
Sbjct: 166 SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF-- 223
Query: 159 AKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
++YT D+WS G + E+ + G +PG +D++ R K
Sbjct: 224 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 12/150 (8%)
Query: 55 SEKKLTLVFEH-CDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQ 113
EK L+ V E +DL K F + L+ + + +Q+ +G+ F SR +HRDL +
Sbjct: 169 EEKSLSDVEEEEAPEDLYKDF------LTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 222
Query: 114 NLLINKNGELKLADFGLAR-AFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWS 170
N+L+++ +K+ DFGLAR + P V+ A + W P + ++YT D+WS
Sbjct: 223 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF--DRVYTIQSDVWS 280
Query: 171 AGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
G + E+ + G +PG +D++ R K
Sbjct: 281 FGVLLWEIFSLGASPYPGVKIDEEFCRRLK 310
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 12/150 (8%)
Query: 55 SEKKLTLVFEH-CDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQ 113
EK L+ V E +DL K F + L+ + + +Q+ +G+ F SR +HRDL +
Sbjct: 176 EEKSLSDVEEEEAPEDLYKDF------LTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 229
Query: 114 NLLINKNGELKLADFGLAR-AFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWS 170
N+L+++ +K+ DFGLAR + P V+ A + W P + ++YT D+WS
Sbjct: 230 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF--DRVYTIQSDVWS 287
Query: 171 AGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
G + E+ + G +PG +D++ R K
Sbjct: 288 FGVLLWEIFSLGASPYPGVKIDEEFCRRLK 317
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY-- 91
EI +L H NIV+L D + E L ++ E C D++ E++ + +S +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFC---AGGAVDAVMLELERPLTESQIQVV 140
Query: 92 --QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW 149
Q L L + H ++HRDLK N+L +G++KLADFG++ ++ + + T +
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPY 200
Query: 150 YRPPDVLF----GAKLYTTSIDMWSAGCIFAELANAGRP 184
+ P+V+ + Y D+WS G E+A P
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT----LVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
RE L H IV +YD +E +V E+ D + G +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAEV 145
+ + L F H ++HRD+KP N++I+ +K+ DFG+ARA G V +A +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVD 192
T Y P+ G + S D++S GC+ E+ G P F G D
Sbjct: 181 GTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLT-GEPPFTGDSPD 225
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 12/150 (8%)
Query: 55 SEKKLTLVFEH-CDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQ 113
EK L+ V E +DL K F + L+ + + +Q+ +G+ F SR +HRDL +
Sbjct: 174 EEKSLSDVEEEEAPEDLYKDF------LTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 227
Query: 114 NLLINKNGELKLADFGLAR-AFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWS 170
N+L+++ +K+ DFGLAR + P V+ A + W P + ++YT D+WS
Sbjct: 228 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF--DRVYTIQSDVWS 285
Query: 171 AGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
G + E+ + G +PG +D++ R K
Sbjct: 286 FGVLLWEIFSLGASPYPGVKIDEEFCRRLK 315
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 36/224 (16%)
Query: 5 GVDRTPNT-ALAIKGTHLVGNEGVPSSALREICLLKELK-------HKNIVRLYDVLHSE 56
G+D+T +A+K + EG S R L+ ELK H N+V L
Sbjct: 87 GIDKTATCRTVAVK----MLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKP 140
Query: 57 KK-LTLVFEHCD-QDLKKYFDSLNGEI------DLDIVKSFM---------YQLLRGLAF 99
L ++ E C +L Y S E D+ K F+ +Q+ +G+ F
Sbjct: 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF 200
Query: 100 CHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-AFGIP--VKCYSAEVVTLWYRPPDVL 156
SR +HRDL +N+L+++ +K+ DFGLAR + P V+ A + W P +
Sbjct: 201 LASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF 260
Query: 157 FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
++YT D+WS G + E+ + G +PG +D++ R K
Sbjct: 261 --DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 302
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 8/186 (4%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
++AIK + E L E ++ + H NI+RL V+ K + +V E + L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
+ + + + + + + G+ + +HRDL +N+LIN N K++DFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 132 RAF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF 186
R P Y+ ++ W P + + + +T++ D+WS G + E+ + G RP +
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 187 PGSDVD 192
S+ D
Sbjct: 253 EMSNQD 258
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 12/150 (8%)
Query: 55 SEKKLTLVFEH-CDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQ 113
EK L+ V E +DL K F + L+ + + +Q+ +G+ F SR +HRDL +
Sbjct: 167 EEKSLSDVEEEEAPEDLYKDF------LTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR 220
Query: 114 NLLINKNGELKLADFGLAR-AFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWS 170
N+L+++ +K+ DFGLAR + P V+ A + W P + ++YT D+WS
Sbjct: 221 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF--DRVYTIQSDVWS 278
Query: 171 AGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
G + E+ + G +PG +D++ R K
Sbjct: 279 FGVLLWEIFSLGASPYPGVKIDEEFCRRLK 308
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 43/258 (16%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE---IDLDIVKSFM 90
EI ++ +L H ++ L+D + ++ L+ E + FD + E + V ++M
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGG--ELFDRIAAEDYKMSEAEVINYM 155
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLL--INKNGELKLADFGLARAFGIPVKCYSAEVVTL 148
Q GL H +++H D+KP+N++ K +K+ DFGLA P + T
Sbjct: 156 RQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN-PDEIVKVTTATA 214
Query: 149 WYRPPDVL--FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPT 206
+ P+++ YT DMW+ G + L + P F G D + L+ + +
Sbjct: 215 EFAAPEIVDREPVGFYT---DMWAIGVLGYVLLSGLSP-FAGEDDLETLQNVKRCDWEFD 270
Query: 207 EDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSH 266
ED +FS V+P + +D ++ LL P +R++ DA+ H
Sbjct: 271 ED---------------------AFSSVSP----EAKDFIKNLLQKEPRKRLTVHDALEH 305
Query: 267 IYF----SDLNVAIKSER 280
+ S+L I S R
Sbjct: 306 PWLKGDHSNLTSRIPSSR 323
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
EI + + L H+++V + + +V E C + + + ++ Q+
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 130
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
+ G + H V+HRDLK NL +N++ E+K+ DFGLA + T Y P
Sbjct: 131 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 190
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+VL K ++ +D+WS GCI L G+P F S + + RI K
Sbjct: 191 EVL-SKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKETYLRIKK 235
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 8/181 (4%)
Query: 8 RTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD 67
R +AIK + +RE ++ +L + IVRL V +E L LV E
Sbjct: 34 RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAG 92
Query: 68 QD-LKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLA 126
L K+ EI + V ++Q+ G+ + +N +HRDL +N+L+ K++
Sbjct: 93 GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKIS 152
Query: 127 DFGLARAFGIPVKCYSAEVVT----LWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG 182
DFGL++A G Y+A WY P + F + +++ D+WS G E + G
Sbjct: 153 DFGLSKALGADDSYYTARSAGKWPLKWYAPECINF--RKFSSRSDVWSYGVTMWEALSYG 210
Query: 183 R 183
+
Sbjct: 211 Q 211
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 49 LYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHR 108
L L S++ + ++ +DL K F + L+ + + +Q+ +G+ F SR +HR
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDF------LTLEHLICYSFQVAKGMEFLASRKCIHR 163
Query: 109 DLKPQNLLINKNGELKLADFGLAR-AFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTS 165
DL +N+L+++ +K+ DFGLAR + P V+ A + W P + ++YT
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF--DRVYTIQ 221
Query: 166 IDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
D+WS G + E+ + G +PG +D++ R K
Sbjct: 222 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
EI + + L H+++V + + +V E C + + + ++ Q+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
+ G + H V+HRDLK NL +N++ E+K+ DFGLA + T Y P
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+VL K ++ +D+WS GCI L G+P F S + + RI K
Sbjct: 187 EVL-SKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKETYLRIKK 231
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 49 LYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHR 108
L L S++ + ++ +DL K F + L+ + + +Q+ +G+ F SR +HR
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDF------LTLEHLICYSFQVAKGMEFLASRKCIHR 163
Query: 109 DLKPQNLLINKNGELKLADFGLAR-AFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTS 165
DL +N+L+++ +K+ DFGLAR + P V+ A + W P + ++YT
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF--DRVYTIQ 221
Query: 166 IDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
D+WS G + E+ + G +PG +D++ R K
Sbjct: 222 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 11/151 (7%)
Query: 53 LHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKP 112
L S++ + ++ +DL K F + L+ + + +Q+ +G+ F SR +HRDL
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDF------LTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 176
Query: 113 QNLLINKNGELKLADFGLAR-AFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMW 169
+N+L+++ +K+ DFGLAR + P V+ A + W P + ++YT D+W
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF--DRVYTIQSDVW 234
Query: 170 SAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
S G + E+ + G +PG +D++ R K
Sbjct: 235 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
EI + + L H+++V + + +V E C + + + ++ Q+
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
+ G + H V+HRDLK NL +N++ E+K+ DFGLA + T Y P
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+VL K ++ +D+WS GCI L G+P F S + + RI K
Sbjct: 187 EVL-SKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKETYLRIKK 231
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
EI + + L H+++V + + +V E C + + + ++ Q+
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 124
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
+ G + H V+HRDLK NL +N++ E+K+ DFGLA + T Y P
Sbjct: 125 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 184
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+VL K ++ +D+WS GCI L G+P F S + + RI K
Sbjct: 185 EVL-SKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKETYLRIKK 229
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 49 LYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHR 108
L L S++ + ++ +DL K F + L+ + + +Q+ +G+ F SR +HR
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDF------LTLEHLICYSFQVAKGMEFLASRKCIHR 172
Query: 109 DLKPQNLLINKNGELKLADFGLAR-AFGIP--VKCYSAEVVTLWYRPPDVLFGAKLYTTS 165
DL +N+L+++ +K+ DFGLAR + P V+ A + W P + ++YT
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIF--DRVYTIQ 230
Query: 166 IDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
D+WS G + E+ + G +PG +D++ R K
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
EI + + L H+++V + + +V E C + + + ++ Q+
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 148
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
+ G + H V+HRDLK NL +N++ E+K+ DFGLA + T Y P
Sbjct: 149 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 208
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+VL K ++ +D+WS GCI L G+P F S + + RI K
Sbjct: 209 EVL-SKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKETYLRIKK 253
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 35/223 (15%)
Query: 5 GVDRTPNT-ALAIKGTHLVGNEGVPSSALREICLLKELK-------HKNIVRLYDVLHSE 56
G+D+T +A+K + EG S R L+ ELK H N+V L
Sbjct: 51 GIDKTATCRTVAVK----MLKEGATHSEHR--ALMSELKILIHIGHHLNVVNLLGACTKP 104
Query: 57 KK-LTLVFEHCD-QDLKKYFDSLNGEI-----DLDIVKSFM---------YQLLRGLAFC 100
L ++ E C +L Y S E D+ K F+ +Q+ +G+ F
Sbjct: 105 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL 164
Query: 101 HSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGI---PVKCYSAEVVTLWYRPPDVLF 157
SR +HRDL +N+L+++ +K+ DFGLAR V+ A + W P +
Sbjct: 165 ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF- 223
Query: 158 GAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
++YT D+WS G + E+ + G +PG +D++ R K
Sbjct: 224 -DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Query: 14 LAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKK 72
+AIK + E L E ++ + H NI+ L V+ K + +V E+ + L
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 73 YFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ +G+ + + + + G+ + +HRDL +N+LIN N K++DFGL+R
Sbjct: 113 FLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR 172
Query: 133 AF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLFP 187
P Y+ ++ W P + F + +T++ D+WS G + E+ + G RP +
Sbjct: 173 VLEDDPEAAYTTRGGKIPIRWTAPEAIAF--RKFTSASDVWSYGIVMWEVVSYGERPYWE 230
Query: 188 GSDVD 192
++ D
Sbjct: 231 MTNQD 235
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQL 93
EI + + L H+++V + + +V E C + + + ++ Q+
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 94 LRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPP 153
+ G + H V+HRDLK NL +N++ E+K+ DFGLA + T Y P
Sbjct: 151 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 210
Query: 154 DVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
+VL K ++ +D+WS GCI L G+P F S + + RI K
Sbjct: 211 EVL-SKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCLKETYLRIKK 255
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y ID + +
Sbjct: 91 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 150
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + E
Sbjct: 151 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 210
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 211 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 241
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 49 LYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHR 108
L L S++ + ++ +DL K F + L+ + + +Q+ +G+ F SR +HR
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDF------LTLEHLICYSFQVAKGMEFLASRKCIHR 163
Query: 109 DLKPQNLLINKNGELKLADFGLARAFGI---PVKCYSAEVVTLWYRPPDVLFGAKLYTTS 165
DL +N+L+++ +K+ DFGLAR V+ A + W P + ++YT
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF--DRVYTIQ 221
Query: 166 IDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
D+WS G + E+ + G +PG +D++ R K
Sbjct: 222 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 49 LYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHR 108
L L S++ + ++ +DL K F + L+ + + +Q+ +G+ F SR +HR
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDF------LTLEHLICYSFQVAKGMEFLASRKCIHR 163
Query: 109 DLKPQNLLINKNGELKLADFGLARAFGI---PVKCYSAEVVTLWYRPPDVLFGAKLYTTS 165
DL +N+L+++ +K+ DFGLAR V+ A + W P + ++YT
Sbjct: 164 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF--DRVYTIQ 221
Query: 166 IDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
D+WS G + E+ + G +PG +D++ R K
Sbjct: 222 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT----LVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
RE L H IV +YD +E +V E+ D + G +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAEV 145
+ + L F H ++HRD+KP N++I+ +K+ DFG+ARA G V +A +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG 188
T Y P+ G + S D++S GC+ E+ G P F G
Sbjct: 181 GTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLT-GEPPFTG 221
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 31/239 (12%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE-IDLDIVKSFM 90
+ EI +++E K+ NIV D +L +V E+ D + +D + +
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVC 122
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWY 150
+ L+ L F HS V+HRD+K N+L+ +G +KL DFG S V T ++
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 182
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTW 210
P+V+ K Y +D+WS G + E+ G P + +++ R L+ T
Sbjct: 183 MAPEVVT-RKAYGPKVDIWSLGIMAIEMIE-GEPPY----LNENPLRALYLIAT------ 230
Query: 211 PGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
N P+ Q KL+A RD L R L + +R SA++ + H +
Sbjct: 231 ---NGTPEL-------------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 8/186 (4%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
++AIK + E L E ++ + H NI+RL V+ K + +V E + L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
+ + + + + + + G+ + +HRDL +N+LIN N K++DFGL+
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 132 RAF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF 186
R P Y+ ++ W P + + + +T++ D+WS G + E+ + G RP +
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 187 PGSDVD 192
S+ D
Sbjct: 253 EMSNQD 258
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y ID + +
Sbjct: 64 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 123
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + E
Sbjct: 124 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 183
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 184 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 214
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY-- 91
EI +L H NIV+L D + E L ++ E C D++ E++ + +S +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFC---AGGAVDAVMLELERPLTESQIQVV 140
Query: 92 --QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW 149
Q L L + H ++HRDLK N+L +G++KLADFG++ ++ + T +
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPY 200
Query: 150 YRPPDVLF----GAKLYTTSIDMWSAGCIFAELANAGRP 184
+ P+V+ + Y D+WS G E+A P
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 40/235 (17%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLA----FCH 101
IV +Y+ L++ +K L+ C D + F + D + ++++ + + H
Sbjct: 74 IVDVYENLYAGRKCLLIVMEC-LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 102 SRNVLHRDLKPQNLLINK---NGELKLADFGLARAF----GIPVKCYSAEVVTLWYRPPD 154
S N+ HRD+KP+NLL N LKL DFG A+ + CY T +Y P+
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCY-----TPYYVAPE 187
Query: 155 VLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN 214
VL G + Y S DMWS G I L P + + PGM
Sbjct: 188 VL-GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----------------PGMK 230
Query: 215 LLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
+ P+ +S+V+ ++ + L++ LL P QRM+ + M+H +
Sbjct: 231 TRIRMGQYEF--PNPEWSEVSEEV----KMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y ID + +
Sbjct: 78 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 137
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + E
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 198 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 228
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y ID + +
Sbjct: 59 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 118
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + E
Sbjct: 119 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 178
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 179 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 209
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 13/184 (7%)
Query: 14 LAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ----D 69
+AIK +L + L+EI + + H NIV Y + +L LV + D
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 70 LKKYF----DSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKL 125
+ K+ + +G +D + + + ++L GL + H +HRD+K N+L+ ++G +++
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 162
Query: 126 ADFGLAR--AFGIPV---KCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
ADFG++ A G + K V T + P+V+ + Y D+WS G ELA
Sbjct: 163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT 222
Query: 181 AGRP 184
P
Sbjct: 223 GAAP 226
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y ID + +
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 122
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + E
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 183 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 213
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y ID + +
Sbjct: 60 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + E
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 180 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 210
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 49 LYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHR 108
L L S++ + ++ +DL K F + L+ + + +Q+ +G+ F SR +HR
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDF------LTLEHLICYSFQVAKGMEFLASRKCIHR 172
Query: 109 DLKPQNLLINKNGELKLADFGLARAFGI---PVKCYSAEVVTLWYRPPDVLFGAKLYTTS 165
DL +N+L+++ +K+ DFGLAR V+ A + W P + ++YT
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF--DRVYTIQ 230
Query: 166 IDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
D+WS G + E+ + G +PG +D++ R K
Sbjct: 231 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT----LVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
RE L H IV +YD +E +V E+ D + G +
Sbjct: 61 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAEV 145
+ + L F H ++HRD+KP N++I+ +K+ DFG+ARA G V +A +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG 188
T Y P+ G + S D++S GC+ E+ G P F G
Sbjct: 181 GTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLT-GEPPFTG 221
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y ID + +
Sbjct: 67 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 126
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + E
Sbjct: 127 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 186
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 187 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 217
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 13/184 (7%)
Query: 14 LAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ----D 69
+AIK +L + L+EI + + H NIV Y + +L LV + D
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 70 LKKYF----DSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKL 125
+ K+ + +G +D + + + ++L GL + H +HRD+K N+L+ ++G +++
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 157
Query: 126 ADFGLAR--AFGIPV---KCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN 180
ADFG++ A G + K V T + P+V+ + Y D+WS G ELA
Sbjct: 158 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT 217
Query: 181 AGRP 184
P
Sbjct: 218 GAAP 221
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 31/239 (12%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE-IDLDIVKSFM 90
+ EI +++E K+ NIV D +L +V E+ D + +D + +
Sbjct: 66 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVC 123
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWY 150
+ L+ L F HS V+HRD+K N+L+ +G +KL DFG S V T ++
Sbjct: 124 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 183
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTW 210
P+V+ K Y +D+WS G + E+ G P + +++ R L+ T
Sbjct: 184 MAPEVV-TRKAYGPKVDIWSLGIMAIEMIE-GEPPY----LNENPLRALYLIAT------ 231
Query: 211 PGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
N P+ Q KL+A RD L R L + +R SA++ + H +
Sbjct: 232 ---NGTPEL-------------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y ID + +
Sbjct: 60 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + E
Sbjct: 120 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 180 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 210
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 8/186 (4%)
Query: 13 ALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLK 71
++AIK + E L E ++ + H NI+RL V+ K + +V E + L
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 105
Query: 72 KYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA 131
+ + + + + + + G+ + +HRDL +N+LIN N K++DFGL+
Sbjct: 106 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Query: 132 RAF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF 186
R P Y+ ++ W P + + + +T++ D+WS G + E+ + G RP +
Sbjct: 166 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYW 223
Query: 187 PGSDVD 192
S+ D
Sbjct: 224 EMSNQD 229
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 31/239 (12%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE-IDLDIVKSFM 90
+ EI +++E K+ NIV D +L +V E+ D + +D + +
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVC 122
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWY 150
+ L+ L F HS V+HRD+K N+L+ +G +KL DFG S V T ++
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 182
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTW 210
P+V+ K Y +D+WS G + E+ G P + +++ R L+ T
Sbjct: 183 MAPEVVT-RKAYGPKVDIWSLGIMAIEMIE-GEPPY----LNENPLRALYLIAT------ 230
Query: 211 PGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
N P+ Q KL+A RD L R L + +R SA++ + H +
Sbjct: 231 ---NGTPEL-------------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y ID + +
Sbjct: 58 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 117
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + E
Sbjct: 118 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 177
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 178 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 208
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y ID + +
Sbjct: 65 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 124
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + E
Sbjct: 125 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 184
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 185 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y ID + +
Sbjct: 78 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 137
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + E
Sbjct: 138 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 198 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 228
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 33/240 (13%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE-IDLDIVKSFM 90
+ EI +++E K+ NIV D +L +V E+ D + +D + +
Sbjct: 65 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVC 122
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLW 149
+ L+ L F HS V+HRD+K N+L+ +G +KL DFG P + +E+V T +
Sbjct: 123 RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI-TPEQSKRSEMVGTPY 181
Query: 150 YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDT 209
+ P+V+ K Y +D+WS G + E+ G P + +++ R L+ T
Sbjct: 182 WMAPEVVT-RKAYGPKVDIWSLGIMAIEMIE-GEPPY----LNENPLRALYLIAT----- 230
Query: 210 WPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
N P+ Q KL+A RD L R L + +R SA++ + H +
Sbjct: 231 ----NGTPEL-------------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHSE--KKLTLVFEHC-DQDLKKYFDSLNGEIDLDIVKSF 89
+EI +L+ L H+NIV+ + + + L+ E LK+Y +I+L +
Sbjct: 72 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY 131
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA----EV 145
Q+ +G+ + SR +HRDL +N+L+ ++K+ DFGL +A + + +
Sbjct: 132 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS 191
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K Y S D+WS G EL
Sbjct: 192 PVFWY-APECLMQSKFYIAS-DVWSFGVTLHEL 222
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 26/182 (14%)
Query: 31 ALREICLLKELK-HKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN-GEIDLDIVK- 87
AL EI LL E H N++R Y +++ L + E C+ +L+ +S N + +L + K
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 132
Query: 88 ----SFMYQLLRGLAFCHSRNVLHRDLKPQNLLIN-------------KNGELKLADFGL 130
S + Q+ G+A HS ++HRDLKPQN+L++ +N + ++DFGL
Sbjct: 133 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 131 ARAFGIPVKCYSAEVV----TLWYRPPDVLFGA--KLYTTSIDMWSAGCIFAELANAGRP 184
+ + + T +R P++L + + T SID++S GC+F + + G+
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 185 LF 186
F
Sbjct: 253 PF 254
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y + ID + +
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQY 122
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + E
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 183 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 213
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 26/182 (14%)
Query: 31 ALREICLLKELK-HKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN-GEIDLDIVK- 87
AL EI LL E H N++R Y +++ L + E C+ +L+ +S N + +L + K
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 132
Query: 88 ----SFMYQLLRGLAFCHSRNVLHRDLKPQNLLIN-------------KNGELKLADFGL 130
S + Q+ G+A HS ++HRDLKPQN+L++ +N + ++DFGL
Sbjct: 133 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 131 ARAFGIPVKCYSAEVV----TLWYRPPDVLFGA--KLYTTSIDMWSAGCIFAELANAGRP 184
+ + + T +R P++L + + T SID++S GC+F + + G+
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 185 LF 186
F
Sbjct: 253 PF 254
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E+ L+ Y ID + +
Sbjct: 66 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 125
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + E
Sbjct: 126 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 185
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 186 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 216
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHSE--KKLTLVFEHC-DQDLKKYFDSLNGEIDLDIVKSF 89
+EI +L+ L H+NIV+ + + + L+ E LK+Y +I+L +
Sbjct: 60 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKY 119
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSA----EV 145
Q+ +G+ + SR +HRDL +N+L+ ++K+ DFGL +A + + +
Sbjct: 120 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS 179
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K Y S D+WS G EL
Sbjct: 180 PVFWY-APECLMQSKFYIAS-DVWSFGVTLHEL 210
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT----LVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
RE L H IV +YD +E +V E+ D + G +
Sbjct: 78 REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 137
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAEV 145
+ + L F H ++HRD+KP N++I+ +K+ DFG+ARA G V +A +
Sbjct: 138 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 197
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG 188
T Y P+ G + S D++S GC+ E+ G P F G
Sbjct: 198 GTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLT-GEPPFTG 238
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY-- 91
EI +L H NIV+L D + E L ++ E C D++ E++ + +S +
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLWILIEFC---AGGAVDAVMLELERPLTESQIQVV 113
Query: 92 --QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGL-ARAFGIPVKCYSAEVVTL 148
Q L L + H ++HRDLK N+L +G++KLADFG+ A+ ++ + + T
Sbjct: 114 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTP 173
Query: 149 WYRPPDVLF----GAKLYTTSIDMWSAGCIFAELANAGRP 184
++ P+V+ + Y D+WS G E+A P
Sbjct: 174 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 30/186 (16%)
Query: 31 ALREICLLKELK-HKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN-GEIDLDIVK- 87
AL EI LL E H N++R Y +++ L + E C+ +L+ +S N + +L + K
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 114
Query: 88 ----SFMYQLLRGLAFCHSRNVLHRDLKPQNLLIN-------------KNGELKLADFGL 130
S + Q+ G+A HS ++HRDLKPQN+L++ +N + ++DFGL
Sbjct: 115 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 131 ARAFGIPVKCYSAEVV----TLWYRPPDVLFGA------KLYTTSIDMWSAGCIFAELAN 180
+ + + T +R P++L + + T SID++S GC+F + +
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 181 AGRPLF 186
G+ F
Sbjct: 235 KGKHPF 240
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSF 89
REI +LK L+H NIV+ V +S + L L+ E L++Y ID + +
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQY 122
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS----AEV 145
Q+ +G+ + ++ +HRDL +N+L+ +K+ DFGL + + E
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L +K ++ + D+WS G + EL
Sbjct: 183 PIFWY-APESLTESK-FSVASDVWSFGVVLYEL 213
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKY-FDSLNGEIDLDIVKSFMYQ 92
EI +L ++H NI+++ D+ ++ LV E L + F + +D + Q
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 93 LLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRP 152
L+ + + ++++HRD+K +N++I ++ +KL DFG A A+ K + T+ Y
Sbjct: 139 LVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSA-AYLERGKLFYTFCGTIEYCA 197
Query: 153 PDVLFGAKLYTTSIDMWSAGCIFAELANAGRPL 185
P+VL G ++MWS G L P
Sbjct: 198 PEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 8/157 (5%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
+RE ++ +L + IVRL V +E L LV E L K+ EI + V +
Sbjct: 384 MREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELL 442
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT--- 147
+Q+ G+ + +N +HR+L +N+L+ K++DFGL++A G Y+A
Sbjct: 443 HQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP 502
Query: 148 -LWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR 183
WY P + F + +++ D+WS G E + G+
Sbjct: 503 LKWYAPECINF--RKFSSRSDVWSYGVTMWEALSYGQ 537
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 28/177 (15%)
Query: 29 SSALREICLLKELKHKNIVRLY-------------DVLHSEKKLTLVFEHCD-QDLKKYF 74
S+ L E+ LL L H+ +VR Y + + L + E+C+ + L
Sbjct: 47 STILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLI 106
Query: 75 DSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA--- 131
S N D Q+L L++ HS+ ++HR+LKP N+ I+++ +K+ DFGLA
Sbjct: 107 HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNV 166
Query: 132 -RAFGI----------PVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAE 177
R+ I ++ + T Y +VL G Y ID +S G IF E
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 49/233 (21%)
Query: 83 LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINK-------------------NGEL 123
LD ++ YQ+ + + F HS + H DLKP+N+L + N ++
Sbjct: 117 LDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDI 176
Query: 124 KLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR 183
K+ DFG A + +S V T YR P+V+ A ++ D+WS GCI E G
Sbjct: 177 KVVDFGSA---TYDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYY-LGF 231
Query: 184 PLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGR 243
+FP D + L + ++LG P + K +H + + + + R
Sbjct: 232 TVFPTHDSKEHLAMMERILG-----PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSR 286
Query: 244 --------------------DLLQRLLVCNPVQRMSAEDAMSHIYFSDLNVAI 276
DL+Q++L +P +R++ +A+ H +F L +I
Sbjct: 287 ACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI 339
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 31/239 (12%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGE-IDLDIVKSFM 90
+ EI +++E K+ NIV D +L +V E+ D + +D + +
Sbjct: 66 INEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG--SLTDVVTETCMDEGQIAAVC 123
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWY 150
+ L+ L F HS V+HR++K N+L+ +G +KL DFG S V T ++
Sbjct: 124 RECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 183
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTW 210
P+V+ K Y +D+WS G + E+ G P + +++ R L+ T
Sbjct: 184 MAPEVV-TRKAYGPKVDIWSLGIMAIEMIE-GEPPY----LNENPLRALYLIAT------ 231
Query: 211 PGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYF 269
N P+ Q KL+A RD L R L + +R SA++ + H +
Sbjct: 232 ---NGTPEL-------------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 8/188 (4%)
Query: 11 NTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD- 69
+ A+AIK + E L E ++ + H N+V L V+ K + +V E +
Sbjct: 71 DVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA 130
Query: 70 LKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFG 129
L + +G+ + + + + G+ + +HRDL +N+L+N N K++DFG
Sbjct: 131 LDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFG 190
Query: 130 LARAF-GIPVKCYS---AEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RP 184
L+R P Y+ ++ W P + + + +T++ D+WS G + E+ + G RP
Sbjct: 191 LSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY--RKFTSASDVWSYGIVMWEVMSYGERP 248
Query: 185 LFPGSDVD 192
+ S+ D
Sbjct: 249 YWDMSNQD 256
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 30/186 (16%)
Query: 31 ALREICLLKELK-HKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN-GEIDLDIVK- 87
AL EI LL E H N++R Y +++ L + E C+ +L+ +S N + +L + K
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 114
Query: 88 ----SFMYQLLRGLAFCHSRNVLHRDLKPQNLLIN-------------KNGELKLADFGL 130
S + Q+ G+A HS ++HRDLKPQN+L++ +N + ++DFGL
Sbjct: 115 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 131 ARAFGIPVKCYSAEVV----TLWYRPPDVLFGA------KLYTTSIDMWSAGCIFAELAN 180
+ + + T +R P++L + + T SID++S GC+F + +
Sbjct: 175 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 181 AGRPLF 186
G+ F
Sbjct: 235 KGKHPF 240
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNV 105
IV + H+ KL+ + + + Y S +G ++ + +++ GL H+R V
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 106 LHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTS 165
++RDLKP N+L++++G ++++D GLA F K A V T Y P+VL Y +S
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 166 IDMWSAGCIFAELANAGRPL 185
D +S GC+ +L P
Sbjct: 372 ADWFSLGCMLFKLLRGHSPF 391
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNV 105
IV + H+ KL+ + + + Y S +G ++ + +++ GL H+R V
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 106 LHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTS 165
++RDLKP N+L++++G ++++D GLA F K A V T Y P+VL Y +S
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 166 IDMWSAGCIFAELANAGRPL 185
D +S GC+ +L P
Sbjct: 372 ADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNV 105
IV + H+ KL+ + + + Y S +G ++ + +++ GL H+R V
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 313
Query: 106 LHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTS 165
++RDLKP N+L++++G ++++D GLA F K A V T Y P+VL Y +S
Sbjct: 314 VYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 166 IDMWSAGCIFAELANAGRPL 185
D +S GC+ +L P
Sbjct: 372 ADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNV 105
IV + H+ KL+ + + + Y S +G ++ + +++ GL H+R V
Sbjct: 253 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV 312
Query: 106 LHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTS 165
++RDLKP N+L++++G ++++D GLA F K A V T Y P+VL Y +S
Sbjct: 313 VYRDLKPANILLDEHGHVRISDLGLACDFS--KKKPHASVGTHGYMAPEVLQKGVAYDSS 370
Query: 166 IDMWSAGCIFAELANAGRPL 185
D +S GC+ +L P
Sbjct: 371 ADWFSLGCMLFKLLRGHSPF 390
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 30/173 (17%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDS--------LNGEIDL 83
RE LL L+H++IV+ Y V L +VFE+ DL K+ + G
Sbjct: 64 REAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPT 123
Query: 84 DIVKSFMY----QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVK 139
++ +S M Q+ G+ + S++ +HRDL +N L+ +N +K+ DFG++R
Sbjct: 124 ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR------D 177
Query: 140 CYSAEVVTL---------WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR 183
YS + + W P +++ + +TT D+WS G + E+ G+
Sbjct: 178 VYSTDYYRVGGHTMLPIRWMPPESIMY--RKFTTESDVWSLGVVLWEIFTYGK 228
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 26/185 (14%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
+ E ++ +L H +V+LY V + + LVFE + L Y + G + +
Sbjct: 50 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 109
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-----------AFGIPVK 139
+ G+A+ +V+HRDL +N L+ +N +K++DFG+ R PVK
Sbjct: 110 LDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 169
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLK 196
S EV F Y++ D+WS G + E+ + G+ + S+V + +
Sbjct: 170 WASPEV-----------FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 218
Query: 197 RIFKL 201
F+L
Sbjct: 219 TGFRL 223
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 101/260 (38%), Gaps = 59/260 (22%)
Query: 71 KKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKN-GELKLADFG 129
+ + D LN + V+ +M L + L H ++HRD+KP N L N+ + L DFG
Sbjct: 105 ESFLDILNS-LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFG 163
Query: 130 LARAF--------------GIPVKC--------------YSAEVVTLWYRPPDVLFGAKL 161
LA+ +C + T +R P+VL
Sbjct: 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPN 223
Query: 162 YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG---TPTEDTWPGMNLL-- 216
TT+IDMWSAG IF L + P + SD L +I + G T G ++L
Sbjct: 224 QTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCS 283
Query: 217 -----PDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRL-----------------LVCNP 254
D + M S PKLT+ + L L NP
Sbjct: 284 KEVPAQDLRKLCERLRGMDSS--TPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNP 341
Query: 255 VQRMSAEDAMSHIYFSDLNV 274
R++AE+A+ H +F D+++
Sbjct: 342 ASRITAEEALLHPFFKDMSL 361
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 45/252 (17%)
Query: 32 LREICLLKEL-KHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN-----GEIDLDI 85
+ E+ ++ L +H+NIV L + ++ E+C Y D LN E DLD
Sbjct: 89 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC-----CYGDLLNFLRRKAEADLDK 143
Query: 86 VKS----------FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF- 134
F Q+ +G+AF S+N +HRD+ +N+L+ K+ DFGLAR
Sbjct: 144 EDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 203
Query: 135 ---GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDV 191
VK +A + W P + +YT D+WS G + E+ + G +PG V
Sbjct: 204 NDSNYIVKG-NARLPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 260
Query: 192 DDQLKRIFKLLGTPTEDTWPGMNLL-PDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLL 250
+ + ++ K G + P F P +Y S Q L R Q+
Sbjct: 261 NSKFYKLVK----------DGYQMAQPAFAPKNIY----SIMQACWALEPTHRPTFQQ-- 304
Query: 251 VCNPVQRMSAED 262
+C+ +Q + ED
Sbjct: 305 ICSFLQEQAQED 316
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN-GEIDLDIVKSFM 90
L E ++ + +H NI+RL V+ + + ++ E + F LN G+ + + +
Sbjct: 65 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML 124
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF----GIPVKCYS--AE 144
+ G+ + + +HRDL +N+L+N N K++DFGL+R P + S +
Sbjct: 125 RGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGK 184
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLFPGSDVD 192
+ W P + F + +T++ D WS G + E+ + G RP + S+ D
Sbjct: 185 IPIRWTAPEAIAF--RKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD 231
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 113/270 (41%), Gaps = 45/270 (16%)
Query: 14 LAIKGTHLVGNEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKKLTLVFEHCDQDLKK 72
+A+K + + + E+ ++ L +H+NIV L + ++ E+C
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYC-----C 133
Query: 73 YFDSLN-----GEIDLDIVKS----------FMYQLLRGLAFCHSRNVLHRDLKPQNLLI 117
Y D LN E DLD F Q+ +G+AF S+N +HRD+ +N+L+
Sbjct: 134 YGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 193
Query: 118 NKNGELKLADFGLARAF----GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGC 173
K+ DFGLAR VK +A + W P + +YT D+WS G
Sbjct: 194 TNGHVAKIGDFGLARDIMNDSNYIVKG-NARLPVKWMAPESIF--DCVYTVQSDVWSYGI 250
Query: 174 IFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLL-PDFKPFPMYHPSMSFS 232
+ E+ + G +PG V+ + ++ K G + P F P +Y S
Sbjct: 251 LLWEIFSLGLNPYPGILVNSKFYKLVK----------DGYQMAQPAFAPKNIY----SIM 296
Query: 233 QVAPKLTAKGRDLLQRLLVCNPVQRMSAED 262
Q L R Q+ +C+ +Q + ED
Sbjct: 297 QACWALEPTHRPTFQQ--ICSFLQEQAQED 324
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLT----LVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
RE L H IV +Y +E +V E+ D + G +
Sbjct: 61 REAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE 120
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAEV 145
+ + L F H ++HRD+KP N++I+ +K+ DFG+ARA G V +A +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG 188
T Y P+ G + S D++S GC+ E+ G P F G
Sbjct: 181 GTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLT-GEPPFTG 221
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 49/233 (21%)
Query: 83 LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINK-------------------NGEL 123
LD ++ YQ+ + + F HS + H DLKP+N+L + N ++
Sbjct: 117 LDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDI 176
Query: 124 KLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR 183
K+ DFG A + +S V YR P+V+ A ++ D+WS GCI E G
Sbjct: 177 KVVDFGSA---TYDDEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYY-LGF 231
Query: 184 PLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGR 243
+FP D + L + ++LG P + K +H + + + + R
Sbjct: 232 TVFPTHDSKEHLAMMERILG-----PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSR 286
Query: 244 --------------------DLLQRLLVCNPVQRMSAEDAMSHIYFSDLNVAI 276
DL+Q++L +P +R++ +A+ H +F L +I
Sbjct: 287 ACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI 339
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSF 89
REI +LK L IV+ V + + L LV E+ L+ + +D + +
Sbjct: 60 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 119
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY----SAEV 145
Q+ +G+ + SR +HRDL +N+L+ +K+ADFGLA+ + Y +
Sbjct: 120 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 179
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P + +++ D+WS G + EL
Sbjct: 180 PIFWYAPESL--SDNIFSRQSDVWSFGVVLYEL 210
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 107/247 (43%), Gaps = 31/247 (12%)
Query: 30 SALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSF 89
+ +E+ +++ L+H +V L+ E+ + +V + +Y N + VK F
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF 120
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW 149
+ +L+ L + ++ ++HRD+KP N+L++++G + + DF +A + + T
Sbjct: 121 ICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI-TTMAGTKP 179
Query: 150 YRPPDVLFGAK--LYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTE 207
Y P++ K Y+ ++D WS G EL RP S +
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK------------- 226
Query: 208 DTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA-EDAMSH 266
++ F+ + +PS ++ LL++LL NP QR S D +
Sbjct: 227 ------EIVHTFETTVVTYPSAWSQEMV--------SLLKKLLEPNPDQRFSQLSDVQNF 272
Query: 267 IYFSDLN 273
Y +D+N
Sbjct: 273 PYMNDIN 279
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSF 89
REI +LK L IV+ V + + L LV E+ L+ + +D + +
Sbjct: 73 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 132
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY----SAEV 145
Q+ +G+ + SR +HRDL +N+L+ +K+ADFGLA+ + Y +
Sbjct: 133 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 192
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P + +++ D+WS G + EL
Sbjct: 193 PIFWYAPESL--SDNIFSRQSDVWSFGVVLYEL 223
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 22 VGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKK-LTLVFEHCDQ-DLKKYFDSLNG 79
+ N+ + L E ++ +L+H N+V+L V+ EK L +V E+ + L Y S
Sbjct: 224 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR 283
Query: 80 EI-DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFG--- 135
+ D + F + + + N +HRDL +N+L++++ K++DFGL +
Sbjct: 284 SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 343
Query: 136 ----IPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDV 191
+PVK + E + K ++T D+WS G + E+ + GR +P +
Sbjct: 344 DTGKLPVKWTAPEALR-----------EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 392
Query: 192 DDQLKRIFK 200
D + R+ K
Sbjct: 393 KDVVPRVEK 401
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 37/251 (14%)
Query: 31 ALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFM 90
AL E +L+++ + +V L ++ L LV + K+ G+ ++
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 91 Y--QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-KCYSAEVVT 147
Y ++ GL H +++RDLKP+N+L++ +G ++++D GL A +P + V T
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL--AVHVPEGQTIKGRVGT 348
Query: 148 LWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTE 207
+ Y P+V+ + YT S D W+ GC+ E+ P Q K+ K E
Sbjct: 349 VGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPF-------QQRKKKIK-----RE 395
Query: 208 DTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM-----SAED 262
+ + +P+ + + + + + R L +LL +P +R+ SA +
Sbjct: 396 EVERLVKEVPE--------------EYSERFSPQARSLCSQLLCKDPAERLGCRGGSARE 441
Query: 263 AMSHIYFSDLN 273
H F LN
Sbjct: 442 VKEHPLFKKLN 452
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFMY 91
+E L LKH NI+ L V E L LV E L + I DI+ ++
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG--KRIPPDILVNWAV 112
Query: 92 QLLRGLAFCHSRN---VLHRDLKPQNLLI---NKNGE-----LKLADFGLARAFGIPVKC 140
Q+ RG+ + H ++HRDLK N+LI +NG+ LK+ DFGLAR + K
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK- 171
Query: 141 YSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSD 190
SA W P + A +++ D+WS G + EL P F G D
Sbjct: 172 MSAAGAYAWMAPE--VIRASMFSKGSDVWSYGVLLWELLTGEVP-FRGID 218
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSF 89
REI +LK L IV+ V + + L LV E+ L+ + +D + +
Sbjct: 61 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 120
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY----SAEV 145
Q+ +G+ + SR +HRDL +N+L+ +K+ADFGLA+ + Y +
Sbjct: 121 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 180
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P + +++ D+WS G + EL
Sbjct: 181 PIFWYAPESL--SDNIFSRQSDVWSFGVVLYEL 211
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 119/292 (40%), Gaps = 61/292 (20%)
Query: 15 AIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYF 74
AIK L E +RE+ L +L+H IVR ++ EK T + + Y
Sbjct: 34 AIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW-LEKNTTEKLQPSSPKVYLYI 92
Query: 75 -----------DSLNG-----EIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLIN 118
D +NG E + + Q+ + F HS+ ++HRDLKP N+
Sbjct: 93 QMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT 152
Query: 119 KNGELKLADFGLARAFG---------IPVKCY---SAEVVTLWYRPPDVLFGAKLYTTSI 166
+ +K+ DFGL A P+ Y + +V T Y P+ + G Y+ +
Sbjct: 153 MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS-YSHKV 211
Query: 167 DMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDFKPFPMYH 226
D++S G I EL L+P S Q++R+ L NL F P
Sbjct: 212 DIFSLGLILFEL------LYPFS---TQMERVRTLTDV--------RNL--KFPPL---- 248
Query: 227 PSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDLNVAIKS 278
F+Q P ++Q +L +P++R A + + + F DL+ K+
Sbjct: 249 ----FTQKYPCEYV----MVQDMLSPSPMERPEAINIIENAVFEDLDFPGKT 292
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 22 VGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKK-LTLVFEHCDQ-DLKKYFDSLNG 79
+ N+ + L E ++ +L+H N+V+L V+ EK L +V E+ + L Y S
Sbjct: 37 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR 96
Query: 80 EI-DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFG--- 135
+ D + F + + + N +HRDL +N+L++++ K++DFGL +
Sbjct: 97 SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 156
Query: 136 ----IPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDV 191
+PVK + E + K ++T D+WS G + E+ + GR +P +
Sbjct: 157 DTGKLPVKWTAPEALR-----------EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 205
Query: 192 DDQLKRIFK 200
D + R+ K
Sbjct: 206 KDVVPRVEK 214
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 42/253 (16%)
Query: 29 SSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
+ + E +L+ +H + L + +L V E+ + + S + +
Sbjct: 50 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEV 145
+ +++ L + HSR+V++RD+K +NL+++K+G +K+ DFGL + + G +K +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG-- 167
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
T Y P+VL Y ++D W G + E+ P + + +R+F+L+
Sbjct: 168 -TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFY-----NQDHERLFELI--- 217
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS-----A 260
L+ + + FP L+ + + LL LL +P QR+ A
Sbjct: 218 ---------LMEEIR-FPR------------TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 261 EDAMSHIYFSDLN 273
++ M H +F +N
Sbjct: 256 KEVMEHRFFLSIN 268
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 20/239 (8%)
Query: 6 VDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
V P T +AIK + + L E ++KE ++VRL V+ + ++ E
Sbjct: 35 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 94
Query: 66 CDQ-DLKKYFDSLNGEID---------LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
+ DLK Y SL E++ L + ++ G+A+ ++ +HRDL +N
Sbjct: 95 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 154
Query: 116 LINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
++ ++ +K+ DFG+ R K + W P + G ++TT D+WS G
Sbjct: 155 MVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFG 212
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFK--LLGTPTEDTWPGMNLLPDFKPFPMYHPSM 229
+ E+A + G + L+ + + LL P D P M LL + Y+P M
Sbjct: 213 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDM-LLELMRMCWQYNPKM 268
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 37/251 (14%)
Query: 31 ALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFM 90
AL E +L+++ + +V L ++ L LV + K+ G+ ++
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 91 Y--QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-KCYSAEVVT 147
Y ++ GL H +++RDLKP+N+L++ +G ++++D GL A +P + V T
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL--AVHVPEGQTIKGRVGT 348
Query: 148 LWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTE 207
+ Y P+V+ + YT S D W+ GC+ E+ P Q K+ K E
Sbjct: 349 VGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPF-------QQRKKKIK-----RE 395
Query: 208 DTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM-----SAED 262
+ + +P+ + + + + + R L +LL +P +R+ SA +
Sbjct: 396 EVERLVKEVPE--------------EYSERFSPQARSLCSQLLCKDPAERLGCRGGSARE 441
Query: 263 AMSHIYFSDLN 273
H F LN
Sbjct: 442 VKEHPLFKKLN 452
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 22 VGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKK-LTLVFEHCDQ-DLKKYFDSLNG 79
+ N+ + L E ++ +L+H N+V+L V+ EK L +V E+ + L Y S
Sbjct: 52 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR 111
Query: 80 EI-DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFG--- 135
+ D + F + + + N +HRDL +N+L++++ K++DFGL +
Sbjct: 112 SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171
Query: 136 ----IPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDV 191
+PVK + E + K ++T D+WS G + E+ + GR +P +
Sbjct: 172 DTGKLPVKWTAPEALR-----------EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 220
Query: 192 DDQLKRIFK 200
D + R+ K
Sbjct: 221 KDVVPRVEK 229
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
+ E ++ +L H +V+LY V + + LVFE + L Y + G + +
Sbjct: 50 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 109
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-----------AFGIPVK 139
+ G+A+ V+HRDL +N L+ +N +K++DFG+ R PVK
Sbjct: 110 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 169
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLK 196
S EV F Y++ D+WS G + E+ + G+ + S+V + +
Sbjct: 170 WASPEV-----------FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 218
Query: 197 RIFKL 201
F+L
Sbjct: 219 TGFRL 223
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 22 VGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKK-LTLVFEHCDQ-DLKKYFDSLNG 79
+ N+ + L E ++ +L+H N+V+L V+ EK L +V E+ + L Y S
Sbjct: 43 IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR 102
Query: 80 EI-DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFG--- 135
+ D + F + + + N +HRDL +N+L++++ K++DFGL +
Sbjct: 103 SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 162
Query: 136 ----IPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDV 191
+PVK + P+ L A ++T D+WS G + E+ + GR +P +
Sbjct: 163 DTGKLPVK----------WTAPEALREAA-FSTKSDVWSFGILLWEIYSFGRVPYPRIPL 211
Query: 192 DDQLKRIFK 200
D + R+ K
Sbjct: 212 KDVVPRVEK 220
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 22/170 (12%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYF--------------DSL 77
RE LL L+H++IVR + V + L +VFE+ DL ++ D
Sbjct: 92 REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 151
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
G + L + + Q+ G+ + + +HRDL +N L+ + +K+ DFG++R
Sbjct: 152 PGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI-YS 210
Query: 138 VKCYSAEVVTL----WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR 183
Y T+ W P +L+ + +TT D+WS G + E+ G+
Sbjct: 211 TDYYRVGGRTMLPIRWMPPESILY--RKFTTESDVWSFGVVLWEIFTYGK 258
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
+ E ++ +L H +V+LY V + + LVFE + L Y + G + +
Sbjct: 70 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 129
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-----------AFGIPVK 139
+ G+A+ V+HRDL +N L+ +N +K++DFG+ R PVK
Sbjct: 130 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 189
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLK 196
S EV F Y++ D+WS G + E+ + G+ + S+V + +
Sbjct: 190 WASPEV-----------FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 238
Query: 197 RIFKL 201
F+L
Sbjct: 239 TGFRL 243
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 42/253 (16%)
Query: 29 SSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
+ + E +L+ +H + L + +L V E+ + + S + +
Sbjct: 53 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF 112
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEV 145
+ +++ L + HSR+V++RD+K +NL+++K+G +K+ DFGL + + G +K +
Sbjct: 113 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG-- 170
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
T Y P+VL Y ++D W G + E+ P + + +R+F+L+
Sbjct: 171 -TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFY-----NQDHERLFELI--- 220
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS-----A 260
L+ + + FP L+ + + LL LL +P QR+ A
Sbjct: 221 ---------LMEEIR-FPR------------TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 258
Query: 261 EDAMSHIYFSDLN 273
++ M H +F +N
Sbjct: 259 KEVMEHRFFLSIN 271
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
+ E ++ +L H +V+LY V + + LVFE + L Y + G + +
Sbjct: 53 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 112
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-----------AFGIPVK 139
+ G+A+ V+HRDL +N L+ +N +K++DFG+ R PVK
Sbjct: 113 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 172
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLK 196
S EV F Y++ D+WS G + E+ + G+ + S+V + +
Sbjct: 173 WASPEV-----------FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 221
Query: 197 RIFKL 201
F+L
Sbjct: 222 TGFRL 226
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 42/253 (16%)
Query: 29 SSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
+ + E +L+ +H + L + +L V E+ + + S + +
Sbjct: 50 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEV 145
+ +++ L + HSR+V++RD+K +NL+++K+G +K+ DFGL + + G +K +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG-- 167
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
T Y P+VL Y ++D W G + E+ P + + +R+F+L+
Sbjct: 168 -TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFY-----NQDHERLFELI--- 217
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS-----A 260
L+ + + FP L+ + + LL LL +P QR+ A
Sbjct: 218 ---------LMEEIR-FPR------------TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 261 EDAMSHIYFSDLN 273
++ M H +F +N
Sbjct: 256 KEVMEHRFFLSIN 268
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLN-GEIDLDIVKSFM 90
L E ++ + +H NI+RL V+ + + ++ E + F LN G+ + + +
Sbjct: 63 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML 122
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF----GIPVKCYS--AE 144
+ G+ + + +HRDL +N+L+N N K++DFGL+R P S +
Sbjct: 123 RGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGK 182
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLFPGSDVD 192
+ W P + F + +T++ D WS G + E+ + G RP + S+ D
Sbjct: 183 IPIRWTAPEAIAF--RKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD 229
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 26/185 (14%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
+ E ++ +L H +V+LY V + + LVFE + L Y + G + +
Sbjct: 48 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC 107
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-----------AFGIPVK 139
+ G+A+ V+HRDL +N L+ +N +K++DFG+ R PVK
Sbjct: 108 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 167
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLK 196
S EV F Y++ D+WS G + E+ + G+ + S+V + +
Sbjct: 168 WASPEV-----------FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 216
Query: 197 RIFKL 201
F+L
Sbjct: 217 TGFRL 221
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 38/237 (16%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYF-----DSLNGEIDLD-IV 86
E L L+H N+V L V+ ++ L+++F +C DL ++ S G D D V
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 87 KS---------FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
KS + Q+ G+ + S +V+H+DL +N+L+ +K++D GL R
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR----- 176
Query: 138 VKCYSAEVVTL---------WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG 188
+ Y+A+ L W P +++G ++ D+WS G + E+ + G + G
Sbjct: 177 -EVYAADYYKLLGNSLLPIRWMAPEAIMYGK--FSIDSDIWSYGVVLWEVFSYGLQPYCG 233
Query: 189 SDVDDQLKRIFKLLGTPTED---TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKG 242
D ++ I P D W ++ + FP P F + +L A G
Sbjct: 234 YSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRP--RFKDIHSRLRAWG 288
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 38/237 (16%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYF-----DSLNGEIDLD-IV 86
E L L+H N+V L V+ ++ L+++F +C DL ++ S G D D V
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 87 KS---------FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
KS + Q+ G+ + S +V+H+DL +N+L+ +K++D GL R
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR----- 193
Query: 138 VKCYSAEVVTL---------WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG 188
+ Y+A+ L W P +++G ++ D+WS G + E+ + G + G
Sbjct: 194 -EVYAADYYKLLGNSLLPIRWMAPEAIMYGK--FSIDSDIWSYGVVLWEVFSYGLQPYCG 250
Query: 189 SDVDDQLKRIFKLLGTPTED---TWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKG 242
D ++ I P D W ++ + FP P F + +L A G
Sbjct: 251 YSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRP--RFKDIHSRLRAWG 305
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNV 105
+ +L+ + +L V E+ + Y G+ + ++ GL F H R +
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGI 141
Query: 106 LHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLY 162
++RDLK N++++ G +K+ADFG+ + G+ + + T Y P+++ + Y
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCG---TPDYIAPEII-AYQPY 197
Query: 163 TTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
S+D W+ G + E+ AG+P F G D D+ + I +
Sbjct: 198 GKSVDWWAYGVLLYEML-AGQPPFDGEDEDELFQSIME 234
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 28/198 (14%)
Query: 6 VDRTPN-TALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKL--TLV 62
+D+ N AIK + + LRE L++ L H N++ L ++ + L L+
Sbjct: 43 IDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102
Query: 63 FEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGE 122
C DL ++ S + + SF Q+ RG+ + + +HRDL +N +++++
Sbjct: 103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFT 162
Query: 123 LKLADFGLARAF--------------GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDM 168
+K+ADFGLAR +PVK + E + YR +TT D+
Sbjct: 163 VKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT-YR----------FTTKSDV 211
Query: 169 WSAGCIFAELANAGRPLF 186
WS G + EL G P +
Sbjct: 212 WSFGVLLWELLTRGAPPY 229
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 21 LVGNEGVPSSAL-REICLLKELK-HKNIVRLYDVLH--------SEKKLTLVFEHCDQDL 70
L+ NE + A+ +E+C +K+L H NIV+ + + L+ E C L
Sbjct: 61 LLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQL 120
Query: 71 KKYFDSLN--GEIDLDIVKSFMYQLLRGLAFCHSRN--VLHRDLKPQNLLINKNGELKLA 126
++ + G + D V YQ R + H + ++HRDLK +NLL++ G +KL
Sbjct: 121 VEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLC 180
Query: 127 DFGLARAFG-IPVKCYSAEV-----------VTLWYRPPDVLFGAKLYTT-----SIDMW 169
DFG A P +SA+ T YR P+++ LY+ D+W
Sbjct: 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII---DLYSNFPIGEKQDIW 237
Query: 170 SAGCIFAELANAGRPLFPGSDV 191
+ GCI L P G+ +
Sbjct: 238 ALGCILYLLCFRQHPFEDGAKL 259
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 29 SSALREICLLKELKHKNIVRLYDVL--HSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDI 85
S +EI +L+ L H++I++ EK L LV E+ L+ Y + I L
Sbjct: 61 SGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQ 118
Query: 86 VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY---- 141
+ F Q+ G+A+ HS++ +HR+L +N+L++ + +K+ DFGLA+A + Y
Sbjct: 119 LLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 178
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
+ WY P+ L K Y S D+WS G EL
Sbjct: 179 DGDSPVFWY-APECLKEYKFYYAS-DVWSFGVTLYEL 213
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 22/170 (12%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYF--------------DSL 77
RE LL L+H++IVR + V + L +VFE+ DL ++ D
Sbjct: 63 REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 122
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
G + L + + Q+ G+ + + +HRDL +N L+ + +K+ DFG++R
Sbjct: 123 PGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI-YS 181
Query: 138 VKCYSAEVVTL----WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR 183
Y T+ W P +L+ + +TT D+WS G + E+ G+
Sbjct: 182 TDYYRVGGRTMLPIRWMPPESILY--RKFTTESDVWSFGVVLWEIFTYGK 229
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 42/253 (16%)
Query: 29 SSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
+ + E +L+ +H + L + +L V E+ + + S + +
Sbjct: 50 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEV 145
+ +++ L + HSR+V++RD+K +NL+++K+G +K+ DFGL + + G +K +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG-- 167
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
T Y P+VL Y ++D W G + E+ P + + +R+F+L+
Sbjct: 168 -TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFY-----NQDHERLFELI--- 217
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS-----A 260
L+ + + FP L+ + + LL LL +P QR+ A
Sbjct: 218 ---------LMEEIR-FPR------------TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 261 EDAMSHIYFSDLN 273
++ M H +F +N
Sbjct: 256 KEVMEHRFFLSIN 268
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFM 90
L E ++ + H NI+ L V+ K + ++ E+ + L + +G + + +
Sbjct: 78 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 137
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYS---AEVV 146
+ G+ + + +HRDL +N+L+N N K++DFG++R P Y+ ++
Sbjct: 138 RGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 197
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLFPGSDVD 192
W P + + + +T++ D+WS G + E+ + G RP + S+ D
Sbjct: 198 IRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 242
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 22/170 (12%)
Query: 33 REICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYF--------------DSL 77
RE LL L+H++IVR + V + L +VFE+ DL ++ D
Sbjct: 69 REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 128
Query: 78 NGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 137
G + L + + Q+ G+ + + +HRDL +N L+ + +K+ DFG++R
Sbjct: 129 PGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI-YS 187
Query: 138 VKCYSAEVVTL----WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR 183
Y T+ W P +L+ + +TT D+WS G + E+ G+
Sbjct: 188 TDYYRVGGRTMLPIRWMPPESILY--RKFTTESDVWSFGVVLWEIFTYGK 235
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 42/253 (16%)
Query: 29 SSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
+ + E +L+ +H + L + +L V E+ + + S + +
Sbjct: 50 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEV 145
+ +++ L + HSR+V++RD+K +NL+++K+G +K+ DFGL + + G +K +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG-- 167
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
T Y P+VL Y ++D W G + E+ P + + +R+F+L+
Sbjct: 168 -TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFY-----NQDHERLFELI--- 217
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS-----A 260
L+ + + FP L+ + + LL LL +P QR+ A
Sbjct: 218 ---------LMEEIR-FPR------------TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 261 EDAMSHIYFSDLN 273
++ M H +F +N
Sbjct: 256 KEVMEHRFFLSIN 268
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 42/253 (16%)
Query: 29 SSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
+ + E +L+ +H + L + +L V E+ + + S + +
Sbjct: 55 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF 114
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEV 145
+ +++ L + HSR+V++RD+K +NL+++K+G +K+ DFGL + + G +K +
Sbjct: 115 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG-- 172
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
T Y P+VL Y ++D W G + E+ P + + +R+F+L+
Sbjct: 173 -TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFY-----NQDHERLFELI--- 222
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS-----A 260
L+ + + FP L+ + + LL LL +P QR+ A
Sbjct: 223 ---------LMEEIR-FPR------------TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 260
Query: 261 EDAMSHIYFSDLN 273
++ M H +F +N
Sbjct: 261 KEVMEHRFFLSIN 273
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 20/177 (11%)
Query: 31 ALREICLLKELKHKNIVRL--------YDVLHSEKK--------LTLVFEHCDQD-LKKY 73
A RE+ L +L H NIV YD S K L + E CD+ L+++
Sbjct: 51 AEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW 110
Query: 74 FDSLNGE-IDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR 132
+ GE +D + Q+ +G+ + HS+ +++RDLKP N+ + ++K+ DFGL
Sbjct: 111 IEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT 170
Query: 133 AFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGS 189
+ K ++ TL Y P+ + ++ Y +D+++ G I AEL + F S
Sbjct: 171 SLKNDGKRXRSK-GTLRYMSPEQI-SSQDYGKEVDLYALGLILAELLHVCDTAFETS 225
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 42/253 (16%)
Query: 29 SSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
+ + E +L+ +H + L + +L V E+ + + S + +
Sbjct: 50 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR---AFGIPVKCYSAEV 145
+ +++ L + HSR+V++RD+K +NL+++K+G +K+ DFGL + + G +K +
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG-- 167
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
T Y P+VL Y ++D W G + E+ P + + +R+F+L+
Sbjct: 168 -TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFY-----NQDHERLFELI--- 217
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS-----A 260
L+ + + FP L+ + + LL LL +P QR+ A
Sbjct: 218 ---------LMEEIR-FPR------------TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 261 EDAMSHIYFSDLN 273
++ M H +F +N
Sbjct: 256 KEVMEHRFFLSIN 268
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFM 90
L E ++ + H NI+ L V+ K + ++ E+ + L + +G + + +
Sbjct: 57 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 116
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYS---AEVV 146
+ G+ + + +HRDL +N+L+N N K++DFG++R P Y+ ++
Sbjct: 117 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 176
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLFPGSDVD 192
W P + + + +T++ D+WS G + E+ + G RP + S+ D
Sbjct: 177 IRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 221
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFM 90
L E ++ + H NI+ L V+ K + ++ E+ + L + +G + + +
Sbjct: 63 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML 122
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYS---AEVV 146
+ G+ + + +HRDL +N+L+N N K++DFG++R P Y+ ++
Sbjct: 123 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 182
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLFPGSDVD 192
W P + + + +T++ D+WS G + E+ + G RP + S+ D
Sbjct: 183 IRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 227
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY 91
+ E ++K L H +IV+L ++ E ++ + +L Y + + + + +
Sbjct: 73 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 132
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTL--- 148
Q+ + +A+ S N +HRD+ +N+L+ +KL DFGL+R Y A V L
Sbjct: 133 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIK 191
Query: 149 WYRPPDVLFGAKLYTTSIDMWS-AGCIFAELANAGRPLF 186
W P + F + +TT+ D+W A C++ L+ +P F
Sbjct: 192 WMSPESINF--RRFTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFM 90
L E ++ + H NI+RL V+ + +V E+ + L + + +G+ + + +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-GIPVKCYS---AEVV 146
+ G+ + +HRDL +N+L++ N K++DFGL+R P Y+ ++
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIP 217
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAE-LANAGRPLFPGSDVD 192
W P + F + ++++ D+WS G + E LA RP + ++ D
Sbjct: 218 IRWTAPEAIAF--RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD 262
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY 91
+ E ++K L H +IV+L ++ E ++ + +L Y + + + + +
Sbjct: 61 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 120
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTL--- 148
Q+ + +A+ S N +HRD+ +N+L+ +KL DFGL+R Y A V L
Sbjct: 121 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIK 179
Query: 149 WYRPPDVLFGAKLYTTSIDMWS-AGCIFAELANAGRPLF 186
W P + F + +TT+ D+W A C++ L+ +P F
Sbjct: 180 WMSPESINF--RRFTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 20/239 (8%)
Query: 6 VDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
V P T +AIK + + L E ++KE ++VRL V+ + ++ E
Sbjct: 44 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 103
Query: 66 CDQ-DLKKYFDSLNGEID---------LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
+ DLK Y SL E++ L + ++ G+A+ ++ +HRDL +N
Sbjct: 104 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 163
Query: 116 LINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
++ ++ +K+ DFG+ R K + W P + G ++TT D+WS G
Sbjct: 164 MVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFG 221
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFK--LLGTPTEDTWPGMNLLPDFKPFPMYHPSM 229
+ E+A + G + L+ + + LL P D P M L + Y+P M
Sbjct: 222 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDM-LFELMRMCWQYNPKM 277
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 51/233 (21%)
Query: 8 RTPNTALAIKGTHLVGNEGVPSSA---LREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
R T +A+K ++ PS L E +LK++ H ++++LY + L L+ E
Sbjct: 50 RAGYTTVAVK---MLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106
Query: 65 HCDQDLKKYFDSLNG------------------------------EIDLDIVKSFMYQLL 94
+ + SL G + + + SF +Q+
Sbjct: 107 YAK------YGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160
Query: 95 RGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYR 151
+G+ + +++HRDL +N+L+ + ++K++DFGL+R VK + W
Sbjct: 161 QGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWM- 219
Query: 152 PPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
+ LF +YTT D+WS G + E+ G +PG + R+F LL T
Sbjct: 220 AIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE----RLFNLLKT 267
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMY 91
+ E ++K L H +IV+L ++ E ++ + +L Y + + + + +
Sbjct: 57 MSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 116
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTL--- 148
Q+ + +A+ S N +HRD+ +N+L+ +KL DFGL+R Y A V L
Sbjct: 117 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIK 175
Query: 149 WYRPPDVLFGAKLYTTSIDMWS-AGCIFAELANAGRPLF 186
W P + F + +TT+ D+W A C++ L+ +P F
Sbjct: 176 WMSPESINF--RRFTTASDVWMFAVCMWEILSFGKQPFF 212
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 29 SSALREICLLKELKHKNIVRLYDVL--HSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDI 85
S +EI +L+ L H++I++ EK L LV E+ L+ Y + I L
Sbjct: 61 SGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQ 118
Query: 86 VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY---- 141
+ F Q+ G+A+ H+++ +HR+L +N+L++ + +K+ DFGLA+A + Y
Sbjct: 119 LLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 178
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
+ WY P+ L K Y S D+WS G EL
Sbjct: 179 DGDSPVFWY-APECLKEYKFYYAS-DVWSFGVTLYEL 213
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH-CDQDLKKYFDSLNGEIDLDIVKSFM 90
+ E ++ L H+ +V+LY V ++ + ++ E+ + L Y + +
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+ + + S+ LHRDL +N L+N G +K++DFGL+R + Y++ V + +
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFP 184
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR---PLFPGSDVDDQLKRIFKL 201
+ PP+VL +K +++ D+W+ G + E+ + G+ F S+ + + + +L
Sbjct: 185 VRWSPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 240
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 39/251 (15%)
Query: 32 LREICLLKEL-KHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKY-------------FDS 76
+ E+ ++ L +H+NIV L + ++ E+C DL + F
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156
Query: 77 LNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-- 134
N + + F Q+ +G+AF S+N +HRD+ +N+L+ K+ DFGLAR
Sbjct: 157 ANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 216
Query: 135 --GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVD 192
VK +A + W P + +YT D+WS G + E+ + G +PG V+
Sbjct: 217 DSNYIVKG-NARLPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN 273
Query: 193 DQLKRIFKLLGTPTEDTWPGMNLL-PDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLV 251
+ ++ K G + P F P +Y S Q L R Q+ +
Sbjct: 274 SKFYKLVK----------DGYQMAQPAFAPKNIY----SIMQACWALEPTHRPTFQQ--I 317
Query: 252 CNPVQRMSAED 262
C+ +Q + ED
Sbjct: 318 CSFLQEQAQED 328
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 51/233 (21%)
Query: 8 RTPNTALAIKGTHLVGNEGVPSSA---LREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
R T +A+K ++ PS L E +LK++ H ++++LY + L L+ E
Sbjct: 50 RAGYTTVAVK---MLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106
Query: 65 HCDQDLKKYFDSLNG------------------------------EIDLDIVKSFMYQLL 94
+ + SL G + + + SF +Q+
Sbjct: 107 YAK------YGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160
Query: 95 RGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYR 151
+G+ + ++HRDL +N+L+ + ++K++DFGL+R VK + W
Sbjct: 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWM- 219
Query: 152 PPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
+ LF +YTT D+WS G + E+ G +PG + R+F LL T
Sbjct: 220 AIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE----RLFNLLKT 267
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 33 REICLLKELKHKNIVRLYDVLHS--EKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSF 89
REI +LK L IV+ V + +L LV E+ L+ + +D + +
Sbjct: 57 REIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 116
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGI----PVKCYSAEV 145
Q+ +G+ + SR +HRDL +N+L+ +K+ADFGLA+ + V +
Sbjct: 117 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS 176
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P + +++ D+WS G + EL
Sbjct: 177 PIFWYAPESL--SDNIFSRQSDVWSFGVVLYEL 207
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 20/239 (8%)
Query: 6 VDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
V P T +AIK + + L E ++KE ++VRL V+ + ++ E
Sbjct: 41 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 100
Query: 66 CDQ-DLKKYFDSLNGEID---------LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
+ DLK Y SL E++ L + ++ G+A+ ++ +HRDL +N
Sbjct: 101 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 160
Query: 116 LINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
++ ++ +K+ DFG+ R K + W P + G ++TT D+WS G
Sbjct: 161 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFG 218
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFK--LLGTPTEDTWPGMNLLPDFKPFPMYHPSM 229
+ E+A + G + L+ + + LL P D P M L + Y+P M
Sbjct: 219 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDM-LFELMRMCWQYNPKM 274
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 20/239 (8%)
Query: 6 VDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
V P T +AIK + + L E ++KE ++VRL V+ + ++ E
Sbjct: 43 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 102
Query: 66 CDQ-DLKKYFDSLNGEID---------LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
+ DLK Y SL E++ L + ++ G+A+ ++ +HRDL +N
Sbjct: 103 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 162
Query: 116 LINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
++ ++ +K+ DFG+ R K + W P + G ++TT D+WS G
Sbjct: 163 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFG 220
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFK--LLGTPTEDTWPGMNLLPDFKPFPMYHPSM 229
+ E+A + G + L+ + + LL P D P M L + Y+P M
Sbjct: 221 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDM-LFELMRMCWQYNPKM 276
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 103/239 (43%), Gaps = 20/239 (8%)
Query: 6 VDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
V P T +AIK + + L E ++KE ++VRL V+ + ++ E
Sbjct: 37 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 96
Query: 66 CDQ-DLKKYFDSLNGEID---------LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
+ DLK Y SL E++ L + ++ G+A+ ++ +HRDL +N
Sbjct: 97 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 156
Query: 116 LINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
+ ++ +K+ DFG+ R K + W P + G ++TT D+WS G
Sbjct: 157 XVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFG 214
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFK--LLGTPTEDTWPGMNLLPDFKPFPMYHPSM 229
+ E+A + G + L+ + + LL P D P M LL + Y+P M
Sbjct: 215 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDM-LLELMRMCWQYNPKM 270
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 6 VDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
V P T +AIK + + L E ++KE ++VRL V+ + ++ E
Sbjct: 50 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 109
Query: 66 CDQ-DLKKYFDSLNGEID---------LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
+ DLK Y SL E++ L + ++ G+A+ ++ +HRDL +N
Sbjct: 110 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 169
Query: 116 LINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
++ ++ +K+ DFG+ R K + W P + G ++TT D+WS G
Sbjct: 170 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFG 227
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFK--LLGTPTEDTWPGM 213
+ E+A + G + L+ + + LL P D P M
Sbjct: 228 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDM 268
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 20/239 (8%)
Query: 6 VDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
V P T +AIK + + L E ++KE ++VRL V+ + ++ E
Sbjct: 44 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 103
Query: 66 CDQ-DLKKYFDSLNGEID---------LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
+ DLK Y SL E++ L + ++ G+A+ ++ +HRDL +N
Sbjct: 104 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 163
Query: 116 LINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
++ ++ +K+ DFG+ R K + W P + G ++TT D+WS G
Sbjct: 164 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFG 221
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFK--LLGTPTEDTWPGMNLLPDFKPFPMYHPSM 229
+ E+A + G + L+ + + LL P D P M L + Y+P M
Sbjct: 222 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDM-LFELMRMCWQYNPKM 277
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 20/239 (8%)
Query: 6 VDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
V P T +AIK + + L E ++KE ++VRL V+ + ++ E
Sbjct: 43 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 102
Query: 66 CDQ-DLKKYFDSLNGEID---------LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
+ DLK Y SL E++ L + ++ G+A+ ++ +HRDL +N
Sbjct: 103 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 162
Query: 116 LINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
++ ++ +K+ DFG+ R K + W P + G ++TT D+WS G
Sbjct: 163 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFG 220
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFK--LLGTPTEDTWPGMNLLPDFKPFPMYHPSM 229
+ E+A + G + L+ + + LL P D P M L + Y+P M
Sbjct: 221 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDM-LFELMRMCWQYNPKM 276
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH-CDQDLKKYFDSLNGEIDLDIVKSFM 90
+ E ++ L H+ +V+LY V ++ + ++ E+ + L Y + +
Sbjct: 58 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 117
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+ + + S+ LHRDL +N L+N G +K++DFGL+R + Y++ V + +
Sbjct: 118 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFP 175
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR---PLFPGSDVDDQLKRIFKL 201
+ PP+VL +K + S D+W+ G + E+ + G+ F S+ + + + +L
Sbjct: 176 VRWSPPEVLMYSKFSSKS-DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 231
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 43/253 (16%)
Query: 30 SALREICLLKELKHKN--IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
S EI L +L+ + I+RLYD +++ + +V E + DL + ID K
Sbjct: 56 SYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-KKSIDPWERK 114
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY--SAEV 145
S+ +L + H ++H DLKP N LI +G LKL DFG+A ++V
Sbjct: 115 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 173
Query: 146 VTLWYRPPDVL----------FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQL 195
T+ Y PP+ + + D+WS GCI + P + +Q+
Sbjct: 174 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQI 230
Query: 196 KRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
++ ++ E +P + P +D+L+ L +P
Sbjct: 231 SKLHAIIDPNHEIEFPDI-------------PEKDL-----------QDVLKCCLKRDPK 266
Query: 256 QRMSAEDAMSHIY 268
QR+S + ++H Y
Sbjct: 267 QRISIPELLAHPY 279
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +K+ADFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +K+ADFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 43/253 (16%)
Query: 30 SALREICLLKELKHKN--IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
S EI L +L+ + I+RLYD +++ + +V E + DL + ID K
Sbjct: 72 SYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-KKSIDPWERK 130
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY--SAEV 145
S+ +L + H ++H DLKP N LI +G LKL DFG+A ++V
Sbjct: 131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 189
Query: 146 VTLWYRPPDVL----------FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQL 195
T+ Y PP+ + + D+WS GCI + P + +Q+
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQI 246
Query: 196 KRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
++ ++ E +P + P +D+L+ L +P
Sbjct: 247 SKLHAIIDPNHEIEFPDI-------------PEKDL-----------QDVLKCCLKRDPK 282
Query: 256 QRMSAEDAMSHIY 268
QR+S + ++H Y
Sbjct: 283 QRISIPELLAHPY 295
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 20/239 (8%)
Query: 6 VDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
V P T +AIK + + L E ++KE ++VRL V+ + ++ E
Sbjct: 37 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 96
Query: 66 CDQ-DLKKYFDSLNGEID---------LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
+ DLK Y SL E++ L + ++ G+A+ ++ +HRDL +N
Sbjct: 97 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 156
Query: 116 LINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
++ ++ +K+ DFG+ R K + W P + G ++TT D+WS G
Sbjct: 157 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFG 214
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFK--LLGTPTEDTWPGMNLLPDFKPFPMYHPSM 229
+ E+A + G + L+ + + LL P D P M L + Y+P M
Sbjct: 215 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDM-LFELMRMCWQYNPKM 270
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +K+ADFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 43/253 (16%)
Query: 30 SALREICLLKELKHKN--IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
S EI L +L+ + I+RLYD +++ + +V E + DL + ID K
Sbjct: 52 SYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-KKSIDPWERK 110
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY--SAEV 145
S+ +L + H ++H DLKP N LI +G LKL DFG+A ++V
Sbjct: 111 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 169
Query: 146 VTLWYRPPDVL----------FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQL 195
T+ Y PP+ + + D+WS GCI + P + +Q+
Sbjct: 170 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQI 226
Query: 196 KRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
++ ++ E +P + P +D+L+ L +P
Sbjct: 227 SKLHAIIDPNHEIEFPDI-------------PEKDL-----------QDVLKCCLKRDPK 262
Query: 256 QRMSAEDAMSHIY 268
QR+S + ++H Y
Sbjct: 263 QRISIPELLAHPY 275
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +K+ADFG A+ VK + + T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKR----VKGRTWXLCGTPEY 205
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 20/239 (8%)
Query: 6 VDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
V P T +AIK + + L E ++KE ++VRL V+ + ++ E
Sbjct: 72 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 131
Query: 66 CDQ-DLKKYFDSLNGEID---------LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
+ DLK Y SL E++ L + ++ G+A+ ++ +HRDL +N
Sbjct: 132 MTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 191
Query: 116 LINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
++ ++ +K+ DFG+ R K + W P + G ++TT D+WS G
Sbjct: 192 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFG 249
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFK--LLGTPTEDTWPGMNLLPDFKPFPMYHPSM 229
+ E+A + G + L+ + + LL P D P M L + Y+P M
Sbjct: 250 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDM-LFELMRMCWQYNPKM 305
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH-CDQDLKKYFDSLNGEIDLDIVKSFM 90
+ E ++ L H+ +V+LY V ++ + ++ E+ + L Y + +
Sbjct: 52 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+ + + S+ LHRDL +N L+N G +K++DFGL+R + Y++ V + +
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFP 169
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR---PLFPGSDVDDQLKRIFKL 201
+ PP+VL +K + S D+W+ G + E+ + G+ F S+ + + + +L
Sbjct: 170 VRWSPPEVLMYSKFSSKS-DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFM 90
L E ++ + H NI+RL V+ + +V E+ + L + + +G+ + + +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF----GIPVKCYSAEVV 146
+ G+ + +HRDL +N+L++ N K++DFGL+R ++
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIP 217
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAE-LANAGRPLFPGSDVD 192
W P + F + ++++ D+WS G + E LA RP + ++ D
Sbjct: 218 IRWTAPEAIAF--RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD 262
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 39/251 (15%)
Query: 32 LREICLLKEL-KHKNIVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLNGEIDLD----I 85
+ E+ ++ L +H+NIV L + ++ E+C DL + + ++ D I
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156
Query: 86 VKS---------FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF-- 134
S F Q+ +G+AF S+N +HRD+ +N+L+ K+ DFGLAR
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 216
Query: 135 --GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVD 192
VK +A + W P + +YT D+WS G + E+ + G +PG V+
Sbjct: 217 DSNYIVKG-NARLPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN 273
Query: 193 DQLKRIFKLLGTPTEDTWPGMNLL-PDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLV 251
+ ++ K G + P F P +Y S Q L R Q+ +
Sbjct: 274 SKFYKLVK----------DGYQMAQPAFAPKNIY----SIMQACWALEPTHRPTFQQ--I 317
Query: 252 CNPVQRMSAED 262
C+ +Q + ED
Sbjct: 318 CSFLQEQAQED 328
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH-CDQDLKKYFDSLNGEIDLDIVKSFM 90
+ E ++ L H+ +V+LY V ++ + ++ E+ + L Y + +
Sbjct: 51 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 110
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+ + + S+ LHRDL +N L+N G +K++DFGL+R + Y++ V + +
Sbjct: 111 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFP 168
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR---PLFPGSDVDDQLKRIFKL 201
+ PP+VL +K + S D+W+ G + E+ + G+ F S+ + + + +L
Sbjct: 169 VRWSPPEVLMYSKFSSKS-DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 224
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 51/233 (21%)
Query: 8 RTPNTALAIKGTHLVGNEGVPSSA---LREICLLKELKHKNIVRLYDVLHSEKKLTLVFE 64
R T +A+K ++ PS L E +LK++ H ++++LY + L L+ E
Sbjct: 50 RAGYTTVAVK---MLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE 106
Query: 65 HCDQDLKKYFDSLNG------------------------------EIDLDIVKSFMYQLL 94
+ + SL G + + + SF +Q+
Sbjct: 107 YAK------YGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160
Query: 95 RGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYR 151
+G+ + ++HRDL +N+L+ + ++K++DFGL+R VK + W
Sbjct: 161 QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWM- 219
Query: 152 PPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
+ LF +YTT D+WS G + E+ G +PG + R+F LL T
Sbjct: 220 AIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE----RLFNLLKT 267
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 44/244 (18%)
Query: 38 LKELKHKNIVRLYDVLHS----EKKLTLVFE-HCDQDLKKYFDSLNGEIDLDIVKSFMYQ 92
LK L+H NIVR YD S +K + LV E LK Y + +++S+ Q
Sbjct: 79 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKV-XKIKVLRSWCRQ 137
Query: 93 LLRGLAFCHSRN--VLHRDLKPQNLLINK-NGELKLADFGLARAFGIPVKCYSAEVV-TL 148
+L+GL F H+R ++HRDLK N+ I G +K+ D GLA + ++ V+ T
Sbjct: 138 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKAVIGTP 194
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTED 208
+ P+ + Y S+D+++ G E A + P + +R+
Sbjct: 195 EFXAPEXY--EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRV---------- 242
Query: 209 TWPGMNLLPDFKPFPMYHPSMSFSQVA-PKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHI 267
KP SF +VA P++ +++++ + N +R S +D ++H
Sbjct: 243 -------TSGVKP-------ASFDKVAIPEV----KEIIEGCIRQNKDERYSIKDLLNHA 284
Query: 268 YFSD 271
+F +
Sbjct: 285 FFQE 288
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 54/251 (21%)
Query: 37 LLKELKHKNIVRLYDVLHSEKKLTLVFEHC------DQDLKKYFDSLNGEIDLDIVKSFM 90
LL+ +H NI+ L DV K + LV E D+ L++ F S E + V +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFS---EREASFV---L 127
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLL-INKNGE---LKLADFGLARAFG-----IPVKCY 141
+ + + + + HS+ V+HRDLKP N+L ++++G L++ DFG A+ + CY
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG-SDVDDQ-LKRIF 199
+A V P+VL + Y D+WS G + + P G SD ++ L RI
Sbjct: 188 TANFVA-----PEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIG 241
Query: 200 KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
T + W + S+ A +DL+ ++L +P QR++
Sbjct: 242 SGKFTLSGGNW------------------NTVSETA-------KDLVSKMLHVDPHQRLT 276
Query: 260 AEDAMSHIYFS 270
A+ + H + +
Sbjct: 277 AKQVLQHPWVT 287
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 59 LTLVFEHCDQ-DLKKYFDSLNGE-IDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLL 116
L + E CD+ L+++ + GE +D + Q+ +G+ + HS+ ++HRDLKP N+
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 117 INKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFA 176
+ ++K+ DFGL + K ++ TL Y P+ + ++ Y +D+++ G I A
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRTRSK-GTLRYMSPEQI-SSQDYGKEVDLYALGLILA 226
Query: 177 ELANAGRPLFPGS 189
EL + F S
Sbjct: 227 ELLHVCDTAFETS 239
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 47 VRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL---NGEIDLDIVKSFMYQLLRGLAFCHSR 103
V Y L E + + E D L K++ + I DI+ +++ L HS+
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 104 -NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVL---FGA 159
+V+HRD+KP N+LIN G++K+ DFG++ + + + + Y P+ +
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGIS-GYLVDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 160 KLYTTSIDMWSAGCIFAELA 179
K Y+ D+WS G ELA
Sbjct: 232 KGYSVKSDIWSLGITMIELA 251
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 111/251 (44%), Gaps = 54/251 (21%)
Query: 37 LLKELKHKNIVRLYDVLHSEKKLTLVFEHC------DQDLKKYFDSLNGEIDLDIVKSFM 90
LL+ +H NI+ L DV K + LV E D+ L++ F S E + V +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFS---EREASFV---L 127
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLL-INKNGE---LKLADFGLARAFG-----IPVKCY 141
+ + + + + HS+ V+HRDLKP N+L ++++G L++ DFG A+ + CY
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG-SDVDDQ-LKRIF 199
+A V P+VL + Y D+WS G + + P G SD ++ L RI
Sbjct: 188 TANFVA-----PEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIG 241
Query: 200 KLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMS 259
T + W ++ +DL+ ++L +P QR++
Sbjct: 242 SGKFTLSGGNW-------------------------NTVSETAKDLVSKMLHVDPHQRLT 276
Query: 260 AEDAMSHIYFS 270
A+ + H + +
Sbjct: 277 AKQVLQHPWVT 287
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH-CDQDLKKYFDSLNGEIDLDIVKSFM 90
+ E ++ L H+ +V+LY V ++ + ++ E+ + L Y + +
Sbjct: 47 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 106
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+ + + S+ LHRDL +N L+N G +K++DFGL+R + Y++ V + +
Sbjct: 107 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFP 164
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR---PLFPGSDVDDQLKRIFKL 201
+ PP+VL +K + S D+W+ G + E+ + G+ F S+ + + + +L
Sbjct: 165 VRWSPPEVLMYSKFSSKS-DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 220
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 43/253 (16%)
Query: 30 SALREICLLKELKHKN--IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
S EI L +L+ + I+RLYD +++ + +V E + DL + ID K
Sbjct: 53 SYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-KKSIDPWERK 111
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY--SAEV 145
S+ +L + H ++H DLKP N LI +G LKL DFG+A ++V
Sbjct: 112 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 170
Query: 146 VTLWYRPPDVL----------FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQL 195
T+ Y PP+ + + D+WS GCI + P + +Q+
Sbjct: 171 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQI 227
Query: 196 KRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
++ ++ E +P + P +D+L+ L +P
Sbjct: 228 SKLHAIIDPNHEIEFPDI-------------PEKDL-----------QDVLKCCLKRDPK 263
Query: 256 QRMSAEDAMSHIY 268
QR+S + ++H Y
Sbjct: 264 QRISIPELLAHPY 276
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 43/253 (16%)
Query: 30 SALREICLLKELKHKN--IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
S EI L +L+ + I+RLYD +++ + +V E + DL + ID K
Sbjct: 100 SYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-KKSIDPWERK 158
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY--SAEV 145
S+ +L + H ++H DLKP N LI +G LKL DFG+A ++V
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 146 VTLWYRPPDVL----------FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQL 195
T+ Y PP+ + + D+WS GCI + P + +Q+
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQI 274
Query: 196 KRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
++ ++ E +P + P +D+L+ L +P
Sbjct: 275 SKLHAIIDPNHEIEFPDI-------------PEKDL-----------QDVLKCCLKRDPK 310
Query: 256 QRMSAEDAMSHIY 268
QR+S + ++H Y
Sbjct: 311 QRISIPELLAHPY 323
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 43/253 (16%)
Query: 30 SALREICLLKELKHKN--IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
S EI L +L+ + I+RLYD +++ + +V E + DL + ID K
Sbjct: 100 SYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-KKSIDPWERK 158
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY--SAEV 145
S+ +L + H ++H DLKP N LI +G LKL DFG+A ++V
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 146 VTLWYRPPDVL----------FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQL 195
T+ Y PP+ + + D+WS GCI + P + +Q+
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQI 274
Query: 196 KRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
++ ++ E +P + P +D+L+ L +P
Sbjct: 275 SKLHAIIDPNHEIEFPDI-------------PEKDL-----------QDVLKCCLKRDPK 310
Query: 256 QRMSAEDAMSHIY 268
QR+S + ++H Y
Sbjct: 311 QRISIPELLAHPY 323
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 29 SSALREICLLKELKHKNIVRLYDVL--HSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDI 85
S REI +L+ L H++IV+ EK + LV E+ L+ Y + L
Sbjct: 56 SGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC--VGLAQ 113
Query: 86 VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY---- 141
+ F Q+ G+A+ H+++ +HR L +N+L++ + +K+ DFGLA+A + Y
Sbjct: 114 LLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 173
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
+ WY P+ L K Y S D+WS G EL
Sbjct: 174 DGDSPVFWY-APECLKECKFYYAS-DVWSFGVTLYEL 208
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 29 SSALREICLLKELKHKNIVRLYDVL--HSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDI 85
S REI +L+ L H++IV+ EK + LV E+ L+ Y + L
Sbjct: 55 SGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC--VGLAQ 112
Query: 86 VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY---- 141
+ F Q+ G+A+ H+++ +HR L +N+L++ + +K+ DFGLA+A + Y
Sbjct: 113 LLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 172
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
+ WY P+ L K Y S D+WS G EL
Sbjct: 173 DGDSPVFWY-APECLKECKFYYAS-DVWSFGVTLYEL 207
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 43/253 (16%)
Query: 30 SALREICLLKELKHKN--IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
S EI L +L+ + I+RLYD +++ + +V E + DL + ID K
Sbjct: 72 SYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-KKSIDPWERK 130
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF--GIPVKCYSAEV 145
S+ +L + H ++H DLKP N LI +G LKL DFG+A ++V
Sbjct: 131 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQV 189
Query: 146 VTLWYRPPDVL----------FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQL 195
T+ Y PP+ + + D+WS GCI + P + +Q+
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQI 246
Query: 196 KRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
++ ++ E +P + P +D+L+ L +P
Sbjct: 247 SKLHAIIDPNHEIEFPDI-------------PEKDL-----------QDVLKCCLKRDPK 282
Query: 256 QRMSAEDAMSHIY 268
QR+S + ++H Y
Sbjct: 283 QRISIPELLAHPY 295
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFM 90
L E ++ + H N++ L V+ + ++ E + L + +G+ + + +
Sbjct: 82 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML 141
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFG------IPVKCYSAE 144
+ G+ + N +HRDL +N+L+N N K++DFGL+R +
Sbjct: 142 RGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 201
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF--PGSDVDDQLKRIFKL 201
+ W P + + + +T++ D+WS G + E+ + G RP + DV + +++ ++L
Sbjct: 202 IPIRWTAPEAIQY--RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL 259
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 35/237 (14%)
Query: 46 IVRLYDVLHSEKKLTLVFEH-CDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN 104
I L+ E L LV ++ DL ++ D+ + ++ +++ + H +
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWYRPPDVLF----GA 159
+HRD+KP N+L++ NG ++LADFG S+ V T Y P++L G
Sbjct: 196 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 255
Query: 160 KLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDF 219
Y D WS G E+ P + S L+ +
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYGETPFYAES-------------------------LVETY 290
Query: 220 KPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA---EDAMSHIYFSDLN 273
+ F ++ + +DL+QR L+C+ +R+ ED H +F LN
Sbjct: 291 GKIMNHEERFQFPSHVTDVSEEAKDLIQR-LICSRERRLGQNGIEDFKKHAFFEGLN 346
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 48/266 (18%)
Query: 27 VPSSALREICLLKELK-HKNIVRLYDVLHSEKKLTLVFE---------HCDQDLKKYFDS 76
+ S RE+ +L + + H+N++ L + E + LVFE H + +++F+
Sbjct: 53 IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHK--RRHFNE 110
Query: 77 LNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARA 133
L + + V S L F H++ + HRDLKP+N+L N+ +K+ DFGL
Sbjct: 111 LEASVVVQDVAS-------ALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSG 163
Query: 134 FGIPVKC---YSAEVVT----LWYRPPDVLFG----AKLYTTSIDMWSAGCIFAELANAG 182
+ C + E++T Y P+V+ A +Y D+WS G I L +G
Sbjct: 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL-SG 222
Query: 183 RPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN--LLPDFKPFPMYHPSMSFSQVAPKLTA 240
P F G R G + P L + P ++ + +
Sbjct: 223 YPPFVG--------RCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHI----SC 270
Query: 241 KGRDLLQRLLVCNPVQRMSAEDAMSH 266
+DL+ +LLV + QR+SA + H
Sbjct: 271 AAKDLISKLLVRDAKQRLSAAQVLQH 296
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 93/237 (39%), Gaps = 35/237 (14%)
Query: 46 IVRLYDVLHSEKKLTLVFEH-CDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN 104
I L+ E L LV ++ DL ++ D+ + ++ +++ + H +
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWYRPPDVLF----GA 159
+HRD+KP N+L++ NG ++LADFG S+ V T Y P++L G
Sbjct: 212 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 271
Query: 160 KLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPDF 219
Y D WS G E+ P + S L+ +
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYGETPFYAES-------------------------LVETY 306
Query: 220 KPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSA---EDAMSHIYFSDLN 273
+ F ++ + +DL+QR L+C+ +R+ ED H +F LN
Sbjct: 307 GKIMNHEERFQFPSHVTDVSEEAKDLIQR-LICSRERRLGQNGIEDFKKHAFFEGLN 362
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 26/185 (14%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
+ E ++ +L H +V+LY V + + LV E + L Y + G + +
Sbjct: 51 IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMC 110
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-----------AFGIPVK 139
+ G+A+ V+HRDL +N L+ +N +K++DFG+ R PVK
Sbjct: 111 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 170
Query: 140 CYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLK 196
S EV F Y++ D+WS G + E+ + G+ + S+V + +
Sbjct: 171 WASPEV-----------FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 219
Query: 197 RIFKL 201
F+L
Sbjct: 220 TGFRL 224
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NL+I++ G +K+ DFGLA+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH-CDQDLKKYFDSLNGEIDLDIVKSFM 90
+ E ++ L H+ +V+LY V ++ + ++ E+ + L Y + +
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYS-AEVVTLW 149
+ + + S+ LHRDL +N L+N G +K++DFGL+R + S +
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR 186
Query: 150 YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR---PLFPGSDVDDQLKRIFKL 201
+ PP+VL +K + S D+W+ G + E+ + G+ F S+ + + + +L
Sbjct: 187 WSPPEVLMYSKFSSKS-DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 240
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF----GIPVKCYSAE 144
F Q+ +G+AF S+N +HRD+ +N+L+ K+ DFGLAR VK +A
Sbjct: 171 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG-NAR 229
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
+ W P + +YT D+WS G + E+ + G +PG V+ + ++ K
Sbjct: 230 LPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK---- 283
Query: 205 PTEDTWPGMNLL-PDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAED 262
G + P F P +Y S Q L R Q+ +C+ +Q + ED
Sbjct: 284 ------DGYQMAQPAFAPKNIY----SIMQACWALEPTHRPTFQQ--ICSFLQEQAQED 330
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 131 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 191 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 248
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF----GIPVKCYSAE 144
F Q+ +G+AF S+N +HRD+ +N+L+ K+ DFGLAR VK +A
Sbjct: 163 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG-NAR 221
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
+ W P + +YT D+WS G + E+ + G +PG V+ + ++ K
Sbjct: 222 LPVKWMAPESIF--DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK---- 275
Query: 205 PTEDTWPGMNLL-PDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAED 262
G + P F P +Y S Q L R Q+ +C+ +Q + ED
Sbjct: 276 ------DGYQMAQPAFAPKNIY----SIMQACWALEPTHRPTFQQ--ICSFLQEQAQED 322
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 33 REICLLKELKHKNIVRLYDVLH--SEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDIVKSF 89
+EI +L+ L H++I++ L LV E+ L+ Y + I L + F
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLF 139
Query: 90 MYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY----SAEV 145
Q+ G+A+ H+++ +HRDL +N+L++ + +K+ DFGLA+A + Y +
Sbjct: 140 AQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDS 199
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 178
WY P+ L K Y S D+WS G EL
Sbjct: 200 PVFWY-APECLKEYKFYYAS-DVWSFGVTLYEL 230
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH-CDQDLKKYFDSLNGEIDLDIVKSFM 90
+ E ++ L H+ +V+LY V ++ + ++ E+ + L Y + +
Sbjct: 52 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 111
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLAR-AFGIPVKCYSAEVVTLW 149
+ + + S+ LHRDL +N L+N G +K++DFGL+R +
Sbjct: 112 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR 171
Query: 150 YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR---PLFPGSDVDDQLKRIFKL 201
+ PP+VL +K + S D+W+ G + E+ + G+ F S+ + + + +L
Sbjct: 172 WSPPEVLMYSKFSSKS-DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 186 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 243
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 46 IVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN 104
+V+L+ +K L +V E+ DL N ++ K + +++ L HS
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS--NYDVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVL---FGA 159
++HRD+KP N+L++K+G LKLADFG V C +A V T Y P+VL G
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA-VGTPDYISPEVLKSQGGD 253
Query: 160 KLYTTSIDMWSAGCIFAELANAGRPLFPGS 189
Y D WS G E+ P + S
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVGDTPFYADS 283
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 150 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 210 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 267
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 159 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 219 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 276
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 43 HKNIVRLYDVLHSEKKLTLVFEHC--DQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFC 100
H ++RL D +++ LV E QDL Y G + + F Q++ + C
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQVVAAIQHC 155
Query: 101 HSRNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGA 159
HSR V+HRD+K +N+LI+ + G KL DFG + Y+ T Y PP+ +
Sbjct: 156 HSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD--EPYTDFDGTRVYSPPEWISRH 213
Query: 160 KLYTTSIDMWSAGCIFAELANAGRPL 185
+ + +WS G + ++ P
Sbjct: 214 QYHALPATVWSLGILLYDMVCGDIPF 239
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 135 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 195 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 252
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 186 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 243
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 192 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 249
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 192 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 249
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 185 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 242
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 59 LTLVFEHCDQDL----KKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSR-NVLHRDLKPQ 113
+ +VFE ++L KKY + I L VK QLL GL + H R ++H D+KP+
Sbjct: 105 VVMVFEVLGENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPE 161
Query: 114 NLLINKNG------ELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSID 167
N+L+ ++K+AD G A + + Y+ + T YR P+VL GA + D
Sbjct: 162 NVLMEIVDSPENLIQIKIADLGNACWYD---EHYTNSIQTREYRSPEVLLGAP-WGCGAD 217
Query: 168 MWSAGCIFAELANAGRPLFPG-----SDVDDQLKRIFKLLG 203
+WS C+ EL P + DD + +I +LLG
Sbjct: 218 IWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 258
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 119 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 179 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 236
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 185 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 242
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 185 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 242
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 23/161 (14%)
Query: 59 LTLVFEHCDQDL----KKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSR-NVLHRDLKPQ 113
+ +VFE ++L KKY + I L VK QLL GL + H R ++H D+KP+
Sbjct: 105 VVMVFEVLGENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPE 161
Query: 114 NLLINKNG------ELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSID 167
N+L+ ++K+AD G A + + Y+ + T YR P+VL GA + D
Sbjct: 162 NVLMEIVDSPENLIQIKIADLGNACWYD---EHYTNSIQTREYRSPEVLLGAP-WGCGAD 217
Query: 168 MWSAGCIFAELANAGRPLFPG-----SDVDDQLKRIFKLLG 203
+WS C+ EL P + DD + +I +LLG
Sbjct: 218 IWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 258
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 188 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 245
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 185 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 242
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 192 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 249
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 187 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 244
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 187 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 244
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 188 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 245
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 46 IVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN 104
+V+L+ ++ L +V E+ DL N ++ + + +++ L HS
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLALDAIHSMG 188
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVL---FGA 159
+HRD+KP N+L++K+G LKLADFG V+C +A V T Y P+VL G
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA-VGTPDYISPEVLKSQGGD 247
Query: 160 KLYTTSIDMWSAGCIFAELANAGRPLFPGS 189
Y D WS G E+ P + S
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYADS 277
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 26/162 (16%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLA----FCH 101
IV +Y+ L++ +K L+ C D + F + D + ++ + + + H
Sbjct: 120 IVDVYENLYAGRKCLLIVXEC-LDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLH 178
Query: 102 SRNVLHRDLKPQNLLINK---NGELKLADFGLARAF----GIPVKCYSAEVVTLWYRPPD 154
S N+ HRD+KP+NLL N LKL DFG A+ + CY T +Y P+
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-----TPYYVAPE 233
Query: 155 VLFGAKLYTTSIDMWSAGCIFAEL--------ANAGRPLFPG 188
VL G + Y S D WS G I L +N G + PG
Sbjct: 234 VL-GPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPG 274
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 189 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 246
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 46 IVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN 104
+V+L+ ++ L +V E+ DL N ++ + + +++ L HS
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVL---FGA 159
+HRD+KP N+L++K+G LKLADFG V+C +A V T Y P+VL G
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA-VGTPDYISPEVLKSQGGD 252
Query: 160 KLYTTSIDMWSAGCIFAELANAGRPLFPGS 189
Y D WS G E+ P + S
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 46 IVRLYDVLHSEKKLTLVFEHC-DQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRN 104
+V+L+ ++ L +V E+ DL N ++ + + +++ L HS
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 105 VLHRDLKPQNLLINKNGELKLADFGLARAFGIP--VKCYSAEVVTLWYRPPDVL---FGA 159
+HRD+KP N+L++K+G LKLADFG V+C +A V T Y P+VL G
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA-VGTPDYISPEVLKSQGGD 252
Query: 160 KLYTTSIDMWSAGCIFAELANAGRPLFPGS 189
Y D WS G E+ P + S
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 188 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 245
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 188 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 245
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE--- 144
++ Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKL 201
V W +L ++YT D+WS G EL G + P S++ L++ +L
Sbjct: 181 VPIKWMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 238
Query: 202 LGTP 205
P
Sbjct: 239 PQPP 242
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 43 HKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHS 102
H +V L+ +E +L V E+ + + ++ + + + ++ L + H
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171
Query: 103 RNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLY 162
R +++RDLK N+L++ G +KL D+G+ + P S T Y P++L G Y
Sbjct: 172 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED-Y 230
Query: 163 TTSIDMWSAGCIFAELANAGRPLF 186
S+D W+ G + E+ AGR F
Sbjct: 231 GFSVDWWALGVLMFEMM-AGRSPF 253
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 50/245 (20%)
Query: 37 LLKELKHKNIVRLYDVLHSEKKLTLVFEHC------DQDLKKYFDSLNGEIDLDIVKSFM 90
LL+ +H NI+ L DV K + +V E D+ L++ F S + +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSERE------ASAVL 122
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLL-INKNG---ELKLADFGLARAFG-----IPVKCY 141
+ + + + + H++ V+HRDLKP N+L ++++G +++ DFG A+ + CY
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY 182
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+A V P+VL + Y + D+WS G + + P G DD + I
Sbjct: 183 TANFVA-----PEVL-ERQGYDAACDIWSLGVLLYTMLTGYTPFANGP--DDTPEEILAR 234
Query: 202 LGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAE 261
+G+ F Y S+S + +DL+ ++L +P QR++A
Sbjct: 235 IGS------------GKFSLSGGYWNSVSDT---------AKDLVSKMLHVDPHQRLTAA 273
Query: 262 DAMSH 266
+ H
Sbjct: 274 LVLRH 278
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDIVKSFMYQ 92
E+ +L++ +H NI+ L+ ++ +L +V + C+ L + + + ++ + Q
Sbjct: 58 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 116
Query: 93 LLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT---LW 149
RG+ + H+++++HRDLK N+ ++++ +K+ DFGLA + E ++ LW
Sbjct: 117 TARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 176
Query: 150 YRPPDV-LFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
P + + + Y+ D+++ G + EL P S+++++ +I +++G
Sbjct: 177 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG---QLPYSNINNR-DQIIEMVG 227
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 38/193 (19%)
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA---RAFGIPVKCYSAEV 145
+ Q++ GL H RN+++RDLKP+N+L++ +G ++++D GLA +A K Y+
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG-- 351
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
T + P++L G + Y S+D ++ G E+ A P F+ G
Sbjct: 352 -TPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGP--------------FRARGEK 395
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA-- 263
E+ +L +P K + +D + LL +P +R+ D
Sbjct: 396 VENKELKQRVLEQAVTYP------------DKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 264 ---MSHIYFSDLN 273
+H F D++
Sbjct: 444 DGLRTHPLFRDIS 456
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 38/193 (19%)
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA---RAFGIPVKCYSAEV 145
+ Q++ GL H RN+++RDLKP+N+L++ +G ++++D GLA +A K Y+
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG-- 351
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
T + P++L G + Y S+D ++ G E+ A P F+ G
Sbjct: 352 -TPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGP--------------FRARGEK 395
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA-- 263
E+ +L +P K + +D + LL +P +R+ D
Sbjct: 396 VENKELKQRVLEQAVTYP------------DKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 264 ---MSHIYFSDLN 273
+H F D++
Sbjct: 444 DGLRTHPLFRDIS 456
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLAGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 38/193 (19%)
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA---RAFGIPVKCYSAEV 145
+ Q++ GL H RN+++RDLKP+N+L++ +G ++++D GLA +A K Y+
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG-- 351
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
T + P++L G + Y S+D ++ G E+ A P F+ G
Sbjct: 352 -TPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGP--------------FRARGEK 395
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA-- 263
E+ +L +P K + +D + LL +P +R+ D
Sbjct: 396 VENKELKQRVLEQAVTYP------------DKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 264 ---MSHIYFSDLN 273
+H F D++
Sbjct: 444 DGLRTHPLFRDIS 456
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDIVKSFMYQ 92
E+ +L++ +H NI+ L+ ++ +L +V + C+ L + + + ++ + Q
Sbjct: 70 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 128
Query: 93 LLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT---LW 149
RG+ + H+++++HRDLK N+ ++++ +K+ DFGLA + E ++ LW
Sbjct: 129 TARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 150 YRPPDV-LFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
P + + + Y+ D+++ G + EL P S+++++ +I +++G
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG---QLPYSNINNR-DQIIEMVG 239
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 47 VRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL---NGEIDLDIVKSFMYQLLRGLAFCHSR 103
V Y L E + + E D L K++ + I DI+ +++ L HS+
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 104 -NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVL---FGA 159
+V+HRD+KP N+LIN G++K+ DFG++ + + + Y P+ +
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGIS-GYLVDDVAKDIDAGCKPYMAPERINPELNQ 187
Query: 160 KLYTTSIDMWSAGCIFAELA 179
K Y+ D+WS G ELA
Sbjct: 188 KGYSVKSDIWSLGITMIELA 207
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NL+I++ G +K+ DFG A+ VK + + T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NL+I++ G +K+ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NL+I++ G +K+ DFG A+ VK + + T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NL+I++ G +K+ DFG A+ VK + + T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NL+I++ G +K+ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 38/193 (19%)
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA---RAFGIPVKCYSAEV 145
+ Q++ GL H RN+++RDLKP+N+L++ +G ++++D GLA +A K Y+
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG-- 351
Query: 146 VTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTP 205
T + P++L G + Y S+D ++ G E+ A P F+ G
Sbjct: 352 -TPGFMAPELLLGEE-YDFSVDYFALGVTLYEMIAARGP--------------FRARGEK 395
Query: 206 TEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDA-- 263
E+ +L +P K + +D + LL +P +R+ D
Sbjct: 396 VENKELKQRVLEQAVTYP------------DKFSPASKDFCEALLQKDPEKRLGFRDGSC 443
Query: 264 ---MSHIYFSDLN 273
+H F D++
Sbjct: 444 DGLRTHPLFRDIS 456
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NL+I++ G +K+ DFG A+ VK + + T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NL+I++ G +++ DFGLA+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 43/253 (16%)
Query: 30 SALREICLLKELKHKN--IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVK 87
S EI L +L+ + I+RLYD +++ + +V E + DL + ID K
Sbjct: 100 SYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-KKSIDPWERK 158
Query: 88 SFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCY--SAEV 145
S+ +L + H ++H DLKP N LI +G LKL DFG+A ++V
Sbjct: 159 SYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 146 VTLWYRPPDVL----------FGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQL 195
+ Y PP+ + + D+WS GCI + P + +Q+
Sbjct: 218 GAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQI 274
Query: 196 KRIFKLLGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPV 255
++ ++ E +P + P +D+L+ L +P
Sbjct: 275 SKLHAIIDPNHEIEFPDI-------------PEKDL-----------QDVLKCCLKRDPK 310
Query: 256 QRMSAEDAMSHIY 268
QR+S + ++H Y
Sbjct: 311 QRISIPELLAHPY 323
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLXGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 43 HKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHS 102
H +V L+ +E +L V E+ + + ++ + + + ++ L + H
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 128
Query: 103 RNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLY 162
R +++RDLK N+L++ G +KL D+G+ + P S T Y P++L G Y
Sbjct: 129 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED-Y 187
Query: 163 TTSIDMWSAGCIFAELANAGRPLF 186
S+D W+ G + E+ AGR F
Sbjct: 188 GFSVDWWALGVLMFEMM-AGRSPF 210
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ G+ + R ++HRDL +N+L+ +K+ DFGLA+ G K Y AE V
Sbjct: 122 QIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 182 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 239
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 43 HKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHS 102
H +V L+ +E +L V E+ + + ++ + + + ++ L + H
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 124
Query: 103 RNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLY 162
R +++RDLK N+L++ G +KL D+G+ + P S T Y P++L G Y
Sbjct: 125 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED-Y 183
Query: 163 TTSIDMWSAGCIFAELANAGRPLF 186
S+D W+ G + E+ AGR F
Sbjct: 184 GFSVDWWALGVLMFEMM-AGRSPF 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 43 HKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHS 102
H +V L+ +E +L V E+ + + ++ + + + ++ L + H
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 139
Query: 103 RNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLY 162
R +++RDLK N+L++ G +KL D+G+ + P S T Y P++L G Y
Sbjct: 140 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED-Y 198
Query: 163 TTSIDMWSAGCIFAELANAGRPLF 186
S+D W+ G + E+ AGR F
Sbjct: 199 GFSVDWWALGVLMFEMM-AGRSPF 221
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 135 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWTLCGTPEY 190
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 191 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 225
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 197
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 198 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 232
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 144 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 199
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 200 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 197
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 198 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 232
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF--GIPVKCYSAEVVTLW 149
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ C + E
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE----- 224
Query: 150 YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
Y P+++ +K Y ++D W+ G + E+A P F
Sbjct: 225 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 225
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 226 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 205
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 225
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 226 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 260
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-T 147
+ Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGT 201
Query: 148 LWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
Y P+++ +K Y ++D W+ G + E+A P F
Sbjct: 202 PEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 136 QIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 191
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 192 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 226
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWTLCGTPEY 205
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 206 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 240
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDIVKSFMYQ 92
E+ +L++ +H NI+ L+ + +L +V + C+ L + + + ++ + Q
Sbjct: 70 EVGVLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQ 128
Query: 93 LLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT---LW 149
RG+ + H+++++HRDLK N+ ++++ +K+ DFGLA + E ++ LW
Sbjct: 129 TARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 150 YRPPDV-LFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLG 203
P + + + Y+ D+++ G + EL P S+++++ +I +++G
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG---QLPYSNINNR-DQIIEMVG 239
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNV 105
+ +L+ + +L V E+ + Y G + ++ GL F S+ +
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 142
Query: 106 LHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLY 162
++RDLK N++++ G +K+ADFG+ + G+ K + T Y P+++ + Y
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCG---TPDYIAPEII-AYQPY 198
Query: 163 TTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
S+D W+ G + E+ AG+ F G D D+ + I +
Sbjct: 199 GKSVDWWAFGVLLYEML-AGQAPFEGEDEDELFQSIME 235
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 51/227 (22%)
Query: 86 VKSFMYQLLRGLAFCHSRNVLHRDLKPQNLL-INKNGEL------------------KLA 126
V+ +QL + + F H + H DLKP+N+L +N + EL ++
Sbjct: 139 VRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVV 198
Query: 127 DFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
DFG A + +S V T YR P+V+ ++ D+WS GCI E G LF
Sbjct: 199 DFGSA---TFDHEHHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYY-VGFTLF 253
Query: 187 PGSDVDDQLKRIFKLLG-TPT--------------------EDTWPGMNLLPDFKPFPMY 225
D + L + ++LG P+ E+T G + + KP Y
Sbjct: 254 QTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRY 313
Query: 226 HPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAEDAMSHIYFSDL 272
S + + DL++ +L P +R++ +A+ H +F+ L
Sbjct: 314 LTSEAEEH------HQLFDLIESMLEYEPAKRLTLGEALQHPFFARL 354
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 20/239 (8%)
Query: 6 VDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
V P T +AIK + + L E ++KE ++VRL V+ + ++ E
Sbjct: 40 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 99
Query: 66 CDQ-DLKKYFDSLNGEI---------DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
+ DLK Y SL + L + ++ G+A+ ++ +HRDL +N
Sbjct: 100 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 159
Query: 116 LINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
++ ++ +K+ DFG+ R K + W P + G ++TT D+WS G
Sbjct: 160 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFG 217
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFK--LLGTPTEDTWPGMNLLPDFKPFPMYHPSM 229
+ E+A + G + L+ + + LL P D P M L + Y+P M
Sbjct: 218 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDM-LFELMRMCWQYNPKM 273
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 46 IVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHSRNV 105
+ +L+ + +L V E+ + Y G + ++ GL F S+ +
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 463
Query: 106 LHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLY 162
++RDLK N++++ G +K+ADFG+ + G+ K + T Y P+++ + Y
Sbjct: 464 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCG---TPDYIAPEII-AYQPY 519
Query: 163 TTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
S+D W+ G + E+ AG+ F G D D+ + I +
Sbjct: 520 GKSVDWWAFGVLLYEML-AGQAPFEGEDEDELFQSIME 556
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFE-HCDQDLKKYFDSLNGEID-------- 82
L E ++K ++VRL V+ + +V E DLK Y SL E +
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 83 -LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPV 138
L + ++ G+A+ +++ +HRDL +N ++ + +K+ DFG+ R
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 139 KCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K + W P + G ++TTS DMWS G + E+ + + G + LK
Sbjct: 188 KGGKGLLPVRWMAPESLKDG--VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 19/223 (8%)
Query: 6 VDRTPNTALAIKGTHLVGNEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEH 65
V P T +AIK + + L E ++KE ++VRL V+ + ++ E
Sbjct: 50 VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 109
Query: 66 CDQ-DLKKYFDSLNGEI---------DLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNL 115
+ DLK Y SL + L + ++ G+A+ ++ +HRDL +N
Sbjct: 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNC 169
Query: 116 LINKNGELKLADFGLARAF---GIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAG 172
++ ++ +K+ DFG+ R K + W P + G ++TT D+WS G
Sbjct: 170 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFG 227
Query: 173 CIFAELANAGRPLFPGSDVDDQLKRIFK--LLGTPTEDTWPGM 213
+ E+A + G + L+ + + LL P D P M
Sbjct: 228 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP--DNCPDM 268
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFE-HCDQDLKKYFDSLNGEID-------- 82
L E ++K ++VRL V+ + +V E DLK Y SL E +
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 83 -LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPV 138
L + ++ G+A+ +++ +HRDL +N ++ + +K+ DFG+ R
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 139 KCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K + W P + G ++TTS DMWS G + E+ + + G + LK
Sbjct: 188 KGGKGLLPVRWMAPESLKDG--VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
Query: 42 KHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCH 101
+H VRL L L E C L+++ ++ + V ++ L LA H
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 102 SRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKL 161
S+ ++H D+KP N+ + G KL DFGL G + Y P++L G+
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT-AGAGEVQEGDPRYMAPELLQGS-- 231
Query: 162 YTTSIDMWSAGCIFAELA 179
Y T+ D++S G E+A
Sbjct: 232 YGTAADVFSLGLTILEVA 249
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFE-HCDQDLKKYFDSLNGEID-------- 82
L E ++K ++VRL V+ + +V E DLK Y SL E +
Sbjct: 65 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 124
Query: 83 -LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPV 138
L + ++ G+A+ +++ +HRDL +N ++ + +K+ DFG+ R
Sbjct: 125 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 184
Query: 139 KCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K + W P + G ++TTS DMWS G + E+ + + G + LK
Sbjct: 185 KGGKGLLPVRWMAPESLKDG--VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 240
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFE-HCDQDLKKYFDSLNGEID-------- 82
L E ++K ++VRL V+ + +V E DLK Y SL E +
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 83 -LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPV 138
L + ++ G+A+ +++ +HRDL +N ++ + +K+ DFG+ R
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYR 187
Query: 139 KCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K + W P + G ++TTS DMWS G + E+ + + G + LK
Sbjct: 188 KGGKGLLPVRWMAPESLKDG--VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDIVKSFM 90
L E ++++L + IVR+ + +E + LV E + L KY D +I++ +
Sbjct: 418 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE-LV 475
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+Q+ G+ + N +HRDL +N+L+ K++DFGL++A Y A+ W
Sbjct: 476 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 535
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKL--- 201
+ P+ + K +++ D+WS G + E + G+ + GS+V L++ ++
Sbjct: 536 VKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 594
Query: 202 LGTPTE 207
G P E
Sbjct: 595 AGCPRE 600
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDIVKSFM 90
L E ++++L + IVR+ + +E + LV E + L KY D +I++ +
Sbjct: 419 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE-LV 476
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+Q+ G+ + N +HRDL +N+L+ K++DFGL++A Y A+ W
Sbjct: 477 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 536
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKL--- 201
+ P+ + K +++ D+WS G + E + G+ + GS+V L++ ++
Sbjct: 537 VKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 595
Query: 202 LGTPTE 207
G P E
Sbjct: 596 AGCPRE 601
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTL 148
F + RG+ + + +HRDL +N+L+ +N K+ADFGL+R + VK +
Sbjct: 147 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR 206
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG 188
W + + +YTT+ D+WS G + E+ + G + G
Sbjct: 207 WMAIESLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCG 244
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTL 148
F + RG+ + + +HRDL +N+L+ +N K+ADFGL+R + VK +
Sbjct: 137 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR 196
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPG 188
W + + +YTT+ D+WS G + E+ + G + G
Sbjct: 197 WMAIESLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCG 234
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL---NGEIDLDIVKS 88
+RE+ + L H+N++RLY V+ + + +V E L D L G L +
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSR 125
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---- 144
+ Q+ G+ + S+ +HRDL +NLL+ +K+ DFGL RA Y +
Sbjct: 126 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
V W P + + ++ + D W G E+ G+ + G + L +I K
Sbjct: 186 VPFAWCAPESL--KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL---NGEIDLDIVKS 88
+RE+ + L H+N++RLY V+ + + +V E L D L G L +
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSR 119
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---- 144
+ Q+ G+ + S+ +HRDL +NLL+ +K+ DFGL RA Y +
Sbjct: 120 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
V W P + + ++ + D W G E+ G+ + G + L +I K
Sbjct: 180 VPFAWCAPESL--KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NL+I++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIII-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NL+I++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 50/245 (20%)
Query: 37 LLKELKHKNIVRLYDVLHSEKKLTLVFEH------CDQDLKKYFDSLNGEIDLDIVKSFM 90
LL+ +H NI+ L DV K + +V E D+ L++ F S + +
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSERE------ASAVL 122
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLL-INKNG---ELKLADFGLARAFG-----IPVKCY 141
+ + + + + H++ V+HRDLKP N+L ++++G +++ DFG A+ + CY
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY 182
Query: 142 SAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKL 201
+A V P+VL + Y + D+WS G + P G DD + I
Sbjct: 183 TANFVA-----PEVL-ERQGYDAACDIWSLGVLLYTXLTGYTPFANGP--DDTPEEILAR 234
Query: 202 LGTPTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRMSAE 261
+G+ F Y S+S + +DL+ + L +P QR++A
Sbjct: 235 IGS------------GKFSLSGGYWNSVSDT---------AKDLVSKXLHVDPHQRLTAA 273
Query: 262 DAMSH 266
+ H
Sbjct: 274 LVLRH 278
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL---NGEIDLDIVKS 88
+RE+ + L H+N++RLY V+ + + +V E L D L G L +
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSR 119
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---- 144
+ Q+ G+ + S+ +HRDL +NLL+ +K+ DFGL RA Y +
Sbjct: 120 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
V W P + + ++ + D W G E+ G+ + G + L +I K
Sbjct: 180 VPFAWCAPESL--KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQ-DLKKYFDSLNGEIDLDIVKSFM 90
L E ++ + H N++ L V+ + ++ E + L + +G+ + + +
Sbjct: 56 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML 115
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFG------IPVKCYSAE 144
+ G+ + N +HR L +N+L+N N K++DFGL+R +
Sbjct: 116 RGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 175
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAG-RPLF--PGSDVDDQLKRIFKL 201
+ W P + + + +T++ D+WS G + E+ + G RP + DV + +++ ++L
Sbjct: 176 IPIRWTAPEAIQY--RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL 233
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 112/266 (42%), Gaps = 48/266 (18%)
Query: 27 VPSSALREICLLKELK-HKNIVRLYDVLHSEKKLTLVFE---------HCDQDLKKYFDS 76
+ S RE+ +L + + H+N++ L + E + LVFE H + +++F+
Sbjct: 53 IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHK--RRHFNE 110
Query: 77 LNGEIDLDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLI---NKNGELKLADFGLARA 133
L + + V S L F H++ + HRDLKP+N+L N+ +K+ DF L
Sbjct: 111 LEASVVVQDVAS-------ALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163
Query: 134 FGIPVKC---YSAEVVT----LWYRPPDVLFG----AKLYTTSIDMWSAGCIFAELANAG 182
+ C + E++T Y P+V+ A +Y D+WS G I L +G
Sbjct: 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL-SG 222
Query: 183 RPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMN--LLPDFKPFPMYHPSMSFSQVAPKLTA 240
P F G R G + P L + P ++ + +
Sbjct: 223 YPPFVG--------RCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHI----SC 270
Query: 241 KGRDLLQRLLVCNPVQRMSAEDAMSH 266
+DL+ +LLV + QR+SA + H
Sbjct: 271 AAKDLISKLLVRDAKQRLSAAQVLQH 296
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 43/253 (16%)
Query: 29 SSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
+ L E +L+ +H + L + +L V E+ + + S D +
Sbjct: 193 AHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF 252
Query: 89 FMYQLLRGLAFCHS-RNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAE 144
+ +++ L + HS +NV++RDLK +NL+++K+G +K+ DFGL + G +K +
Sbjct: 253 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG- 311
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
T Y P+VL Y ++D W G + E+ P + + +++F+L+
Sbjct: 312 --TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFY-----NQDHEKLFELI-- 361
Query: 205 PTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM--SAED 262
L+ + + FP L + + LL LL +P QR+ +ED
Sbjct: 362 ----------LMEEIR-FPR------------TLGPEAKSLLSGLLKKDPKQRLGGGSED 398
Query: 263 A---MSHIYFSDL 272
A M H +F+ +
Sbjct: 399 AKEIMQHRFFAGI 411
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFE-HCDQDLKKYFDSLNGEID-------- 82
L E ++K ++VRL V+ + +V E DLK Y SL E +
Sbjct: 68 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 127
Query: 83 -LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPV 138
L + ++ G+A+ +++ +HRDL +N ++ + +K+ DFG+ R
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 187
Query: 139 KCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K + W P + G ++TTS DMWS G + E+ + + G + LK
Sbjct: 188 KGGKGLLPVRWMAPESLKDG--VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFE-HCDQDLKKYFDSLNGEID-------- 82
L E ++K ++VRL V+ + +V E DLK Y SL E +
Sbjct: 67 LNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP 126
Query: 83 -LDIVKSFMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPV 138
L + ++ G+A+ +++ +HRDL +N ++ + +K+ DFG+ R
Sbjct: 127 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 186
Query: 139 KCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLK 196
K + W P + G ++TTS DMWS G + E+ + + G + LK
Sbjct: 187 KGGKGLLPVRWMAPESLKDG--VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 242
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL---NGEIDLDIVKS 88
+RE+ + L H+N++RLY V+ + + +V E L D L G L +
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSR 115
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---- 144
+ Q+ G+ + S+ +HRDL +NLL+ +K+ DFGL RA Y +
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
V W P + + ++ + D W G E+ G+ + G + L +I K
Sbjct: 176 VPFAWCAPESL--KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL---NGEIDLDIVKS 88
+RE+ + L H+N++RLY V+ + + +V E L D L G L +
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSR 115
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---- 144
+ Q+ G+ + S+ +HRDL +NLL+ +K+ DFGL RA Y +
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
V W P + + ++ + D W G E+ G+ + G + L +I K
Sbjct: 176 VPFAWCAPESL--KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 43/253 (16%)
Query: 29 SSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
+ L E +L+ +H + L + +L V E+ + + S D +
Sbjct: 196 AHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF 255
Query: 89 FMYQLLRGLAFCHS-RNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAE 144
+ +++ L + HS +NV++RDLK +NL+++K+G +K+ DFGL + G +K +
Sbjct: 256 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG- 314
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
T Y P+VL Y ++D W G + E+ P + + +++F+L+
Sbjct: 315 --TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFY-----NQDHEKLFELI-- 364
Query: 205 PTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM--SAED 262
L+ + + FP L + + LL LL +P QR+ +ED
Sbjct: 365 ----------LMEEIR-FPR------------TLGPEAKSLLSGLLKKDPKQRLGGGSED 401
Query: 263 A---MSHIYFSDL 272
A M H +F+ +
Sbjct: 402 AKEIMQHRFFAGI 414
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
L E ++++L + IVR+ + +E + LV E + L KY D +I++ +
Sbjct: 74 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE-LV 131
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+Q+ G+ + N +HRDL +N+L+ K++DFGL++A Y A+ W
Sbjct: 132 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 191
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKL--- 201
+ P+ + K +++ D+WS G + E + G+ + GS+V L++ ++
Sbjct: 192 VKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 250
Query: 202 LGTPTE 207
G P E
Sbjct: 251 AGCPRE 256
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFG A+ G K Y AE V
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 185 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 242
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFG A+ G K Y AE V
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 187 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 244
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
L E ++++L + IVR+ + +E + LV E + L KY D +I++ +
Sbjct: 60 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE-LV 117
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+Q+ G+ + N +HRDL +N+L+ K++DFGL++A Y A+ W
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP 177
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKL--- 201
+ P+ + K +++ D+WS G + E + G+ + GS+V L++ ++
Sbjct: 178 VKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 236
Query: 202 LGTPTE 207
G P E
Sbjct: 237 AGCPRE 242
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFG A+ G K Y AE V
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 187 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 244
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFG A+ G K Y AE V
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 189 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 246
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFG A+ G K Y AE V
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 187 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 244
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 10/173 (5%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
L E ++++L + IVR+ + +E + LV E + L KY D +I++ +
Sbjct: 76 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE-LV 133
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+Q+ G+ + N +HRDL +N+L+ K++DFGL++A Y A+ W
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKR 197
+ P+ + K +++ D+WS G + E + G+ + GS+V L++
Sbjct: 194 VKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 10/173 (5%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
L E ++++L + IVR+ + +E + LV E + L KY D +I++ +
Sbjct: 76 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE-LV 133
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+Q+ G+ + N +HRDL +N+L+ K++DFGL++A Y A+ W
Sbjct: 134 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 193
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKR 197
+ P+ + K +++ D+WS G + E + G+ + GS+V L++
Sbjct: 194 VKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
L E ++++L + IVR+ + +E + LV E + L KY D +I++ +
Sbjct: 60 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE-LV 117
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+Q+ G+ + N +HRDL +N+L+ K++DFGL++A Y A+ W
Sbjct: 118 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 177
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKL--- 201
+ P+ + K +++ D+WS G + E + G+ + GS+V L++ ++
Sbjct: 178 VKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 236
Query: 202 LGTPTE 207
G P E
Sbjct: 237 AGCPRE 242
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAE---VVTL 148
Q+ +G+ + R ++HRDL +N+L+ +K+ DFG A+ G K Y AE V
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 149 WYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKLLGTP 205
W +L ++YT D+WS G EL G + P S++ L++ +L P
Sbjct: 192 WMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 249
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
L E ++++L + IVR+ + +E + LV E + L KY D +I++ +
Sbjct: 54 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE-LV 111
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+Q+ G+ + N +HRDL +N+L+ K++DFGL++A Y A+ W
Sbjct: 112 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 171
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKRIFKL--- 201
+ P+ + K +++ D+WS G + E + G+ + GS+V L++ ++
Sbjct: 172 VKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 230
Query: 202 LGTPTE 207
G P E
Sbjct: 231 AGCPRE 236
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + ++A P F
Sbjct: 205 LAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYPPFF 239
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL---NGEIDLDIVKS 88
+RE+ + L H+N++RLY V+ + + +V E L D L G L +
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSR 125
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF----GIPVKCYSAE 144
+ Q+ G+ + S+ +HRDL +NLL+ +K+ DFGL RA V +
Sbjct: 126 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 185
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
V W P + + ++ + D W G E+ G+ + G + L +I K
Sbjct: 186 VPFAWCAPESL--KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 10/173 (5%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
L E ++++L + IVR+ + +E + LV E + L KY D +I++ +
Sbjct: 66 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE-LV 123
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+Q+ G+ + N +HRDL +N+L+ K++DFGL++A Y A+ W
Sbjct: 124 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 183
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKR 197
+ P+ + K +++ D+WS G + E + G+ + GS+V L++
Sbjct: 184 VKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 235
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 29/256 (11%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSE--KKLTLVFEH-CDQDLKKYFDSLNGEIDLDIVKS 88
+ E ++ + H ++VRL V S + +T + H C L +Y I ++ +
Sbjct: 65 MDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGC---LLEYVHEHKDNIGSQLLLN 121
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTL 148
+ Q+ +G+ + R ++HRDL +N+L+ +K+ DFGLAR K Y+A+ +
Sbjct: 122 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 181
Query: 149 ---WYRPPDVLFGAKLYTTSIDMWSAGCIFAELAN-AGRPL--FPGSDVDDQLKRIFKLL 202
W + + + +T D+WS G EL G+P P ++ D L++ +L
Sbjct: 182 PIKWMALECIHY--RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLP 239
Query: 203 GTP--TEDTWPGM----NLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQ 256
P T D + M + D +P F ++A + + RD QR LV
Sbjct: 240 QPPICTIDVYMVMVKCWMIDADSRP--------KFKELAAEFSRMARD-PQRYLVIQGDD 290
Query: 257 RMSAEDAMSHIYFSDL 272
RM +F +L
Sbjct: 291 RMKLPSPNDSKFFQNL 306
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 10/173 (5%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
L E ++++L + IVR+ + +E + LV E + L KY D +I++ +
Sbjct: 56 LAEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIE-LV 113
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
+Q+ G+ + N +HRDL +N+L+ K++DFGL++A Y A+ W
Sbjct: 114 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF---PGSDVDDQLKR 197
+ P+ + K +++ D+WS G + E + G+ + GS+V L++
Sbjct: 174 VKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 225
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 92 QLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVV-TLWY 150
Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A+ VK + + T Y
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR----VKGRTWXLCGTPEY 204
Query: 151 RPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P ++ +K Y ++D W+ G + E+A P F
Sbjct: 205 LAPAIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 12/176 (6%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL---NGEIDLDIVKS 88
+RE+ + L H+N++RLY V+ + + +V E L D L G L +
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAP--LGSLLDRLRKHQGHFLLGTLSR 115
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAF----GIPVKCYSAE 144
+ Q+ G+ + S+ +HRDL +NLL+ +K+ DFGL RA V +
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 175
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFK 200
V W P + + ++ + D W G E+ G+ + G + L +I K
Sbjct: 176 VPFAWCAPESL--KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 43/253 (16%)
Query: 29 SSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
+ L E +L+ +H + L + +L V E+ + + S D +
Sbjct: 55 AHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF 114
Query: 89 FMYQLLRGLAFCHS-RNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAE 144
+ +++ L + HS +NV++RDLK +NL+++K+G +K+ DFGL + G +K +
Sbjct: 115 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG- 173
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
T Y P+VL Y ++D W G + E+ P + + +++F+L+
Sbjct: 174 --TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFY-----NQDHEKLFELI-- 223
Query: 205 PTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM--SAED 262
L+ + + FP L + + LL LL +P QR+ +ED
Sbjct: 224 ----------LMEEIR-FPR------------TLGPEAKSLLSGLLKKDPKQRLGGGSED 260
Query: 263 A---MSHIYFSDL 272
A M H +F+ +
Sbjct: 261 AKEIMQHRFFAGI 273
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 43/253 (16%)
Query: 29 SSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
+ L E +L+ +H + L + +L V E+ + + S D +
Sbjct: 54 AHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF 113
Query: 89 FMYQLLRGLAFCHS-RNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAE 144
+ +++ L + HS +NV++RDLK +NL+++K+G +K+ DFGL + G +K +
Sbjct: 114 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG- 172
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
T Y P+VL Y ++D W G + E+ P + + +++F+L+
Sbjct: 173 --TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFY-----NQDHEKLFELI-- 222
Query: 205 PTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM--SAED 262
L+ + + FP L + + LL LL +P QR+ +ED
Sbjct: 223 ----------LMEEIR-FPR------------TLGPEAKSLLSGLLKKDPKQRLGGGSED 259
Query: 263 A---MSHIYFSDL 272
A M H +F+ +
Sbjct: 260 AKEIMQHRFFAGI 272
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 32 LREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQD-LKKYFDSLNGEIDLDIVKSFM 90
+E + +L H +V+ Y V E + +V E+ L Y S ++ +
Sbjct: 51 FQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMC 110
Query: 91 YQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLW- 149
Y + G+AF S +HRDL +N L++++ +K++DFG+ R + Y + V T +
Sbjct: 111 YDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSSVGTKFP 168
Query: 150 --YRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGR---PLFPGSDV 191
+ P+V K Y++ D+W+ G + E+ + G+ L+ S+V
Sbjct: 169 VKWSAPEVFHYFK-YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV 214
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 43/253 (16%)
Query: 29 SSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKS 88
+ L E +L+ +H + L + +L V E+ + + S D +
Sbjct: 53 AHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF 112
Query: 89 FMYQLLRGLAFCHS-RNVLHRDLKPQNLLINKNGELKLADFGLARAF---GIPVKCYSAE 144
+ +++ L + HS +NV++RDLK +NL+++K+G +K+ DFGL + G +K +
Sbjct: 113 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG- 171
Query: 145 VVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGT 204
T Y P+VL Y ++D W G + E+ P + + +++F+L+
Sbjct: 172 --TPEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFY-----NQDHEKLFELI-- 221
Query: 205 PTEDTWPGMNLLPDFKPFPMYHPSMSFSQVAPKLTAKGRDLLQRLLVCNPVQRM--SAED 262
L+ + + FP L + + LL LL +P QR+ +ED
Sbjct: 222 ----------LMEEIR-FPR------------TLGPEAKSLLSGLLKKDPKQRLGGGSED 258
Query: 263 A---MSHIYFSDL 272
A M H +F+ +
Sbjct: 259 AKEIMQHRFFAGI 271
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Query: 47 VRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL---NGEIDLDIVKSFMYQLLRGLAFCHSR 103
V Y L E + + E D L K++ + I DI+ +++ L HS+
Sbjct: 96 VTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 155
Query: 104 -NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVL---FGA 159
+V+HRD+KP N+LIN G++K DFG++ + + + Y P+ +
Sbjct: 156 LSVIHRDVKPSNVLINALGQVKXCDFGIS-GYLVDDVAKDIDAGCKPYXAPERINPELNQ 214
Query: 160 KLYTTSIDMWSAGCIFAELA 179
K Y+ D+WS G ELA
Sbjct: 215 KGYSVKSDIWSLGITXIELA 234
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Query: 89 FMYQLLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLA-RAFGIPVK-CYSAEVV 146
+ Q++ + HS ++++RDLKP+NLLI++ G +++ DFG A R G C + E +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEAL 205
Query: 147 TLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELANAGRPLF 186
P+++ +K Y ++D W+ G + E+A P F
Sbjct: 206 A-----PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFF 239
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDIVKSFMYQ 92
E+ +L++ +H NI+ L+ ++ +L +V + C+ L + + + ++ + Q
Sbjct: 56 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 114
Query: 93 LLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT---LW 149
+G+ + H+++++HRDLK N+ ++++ +K+ DFGLA + E ++ LW
Sbjct: 115 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 174
Query: 150 YRPPDVLFGAKL-YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
P + K Y+ D+++ G + EL P S+++++ + IF
Sbjct: 175 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---LPYSNINNRDQIIF 222
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDIVKSFMYQ 92
E+ +L++ +H NI+ L+ ++ +L +V + C+ L + + + ++ + Q
Sbjct: 81 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 139
Query: 93 LLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT---LW 149
+G+ + H+++++HRDLK N+ ++++ +K+ DFGLA + E ++ LW
Sbjct: 140 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 199
Query: 150 YRPPDVLFGAKL-YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
P + K Y+ D+++ G + EL P S+++++ + IF
Sbjct: 200 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---LPYSNINNRDQIIF 247
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDIVKSFMYQ 92
E+ +L++ +H NI+ L+ ++ +L +V + C+ L + + + ++ + Q
Sbjct: 82 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 93 LLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT---LW 149
+G+ + H+++++HRDLK N+ ++++ +K+ DFGLA + E ++ LW
Sbjct: 141 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 200
Query: 150 YRPPDVLFGAKL-YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
P + K Y+ D+++ G + EL P S+++++ + IF
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---LPYSNINNRDQIIF 248
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDIVKSFMYQ 92
E+ +L++ +H NI+ L+ ++ +L +V + C+ L + + + ++ + Q
Sbjct: 59 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 117
Query: 93 LLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT---LW 149
+G+ + H+++++HRDLK N+ ++++ +K+ DFGLA + E ++ LW
Sbjct: 118 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 150 YRPPDVLFGAKL-YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
P + K Y+ D+++ G + EL P S+++++ + IF
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---LPYSNINNRDQIIF 225
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDIVKSFMYQ 92
E+ +L++ +H NI+ L+ ++ +L +V + C+ L + + + ++ + Q
Sbjct: 59 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 117
Query: 93 LLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT---LW 149
+G+ + H+++++HRDLK N+ ++++ +K+ DFGLA + E ++ LW
Sbjct: 118 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 150 YRPPDVLFGAKL-YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
P + K Y+ D+++ G + EL P S+++++ + IF
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---LPYSNINNRDQIIF 225
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDIVKSFMYQ 92
E+ +L++ +H NI+ L+ ++ +L +V + C+ L + + + ++ + Q
Sbjct: 54 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 112
Query: 93 LLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT---LW 149
+G+ + H+++++HRDLK N+ ++++ +K+ DFGLA + E ++ LW
Sbjct: 113 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 150 YRPPDVLFGAKL-YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
P + K Y+ D+++ G + EL P S+++++ + IF
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---LPYSNINNRDQIIF 220
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 12/197 (6%)
Query: 43 HKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSLNGEIDLDIVKSFMYQLLRGLAFCHS 102
H + +L+ + +L V E + + + D + + +++ L F H
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 103 RNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVTLWYRP----PDVLFG 158
+ +++RDLK N+L++ G KLADFG+ + GI C T P P++L
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE-GI---CNGVTTATFCGTPDYIAPEIL-Q 197
Query: 159 AKLYTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIFKLLGTPTEDTWPGMNLLPD 218
LY ++D W+ G + E+ P F + DD + I L TW +
Sbjct: 198 EMLYGPAVDWWAMGVLLYEMLCGHAP-FEAENEDDLFEAI--LNDEVVYPTWLHEDATGI 254
Query: 219 FKPFPMYHPSMSFSQVA 235
K F +P+M +
Sbjct: 255 LKSFMTKNPTMRLGSLT 271
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDIVKSFMYQ 92
E+ +L++ +H NI+ L+ ++ +L +V + C+ L + + + ++ + Q
Sbjct: 82 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 93 LLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT---LW 149
+G+ + H+++++HRDLK N+ ++++ +K+ DFGLA + E ++ LW
Sbjct: 141 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 200
Query: 150 YRPPDVLFGAKL-YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
P + K Y+ D+++ G + EL P S+++++ + IF
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---LPYSNINNRDQIIF 248
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 34 EICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCD-QDLKKYFDSLNGEIDLDIVKSFMYQ 92
E+ +L++ +H NI+ L+ ++ +L +V + C+ L + + + ++ + Q
Sbjct: 74 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 132
Query: 93 LLRGLAFCHSRNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVKCYSAEVVT---LW 149
+G+ + H+++++HRDLK N+ ++++ +K+ DFGLA + E ++ LW
Sbjct: 133 TAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 192
Query: 150 YRPPDVLFGAKL-YTTSIDMWSAGCIFAELANAGRPLFPGSDVDDQLKRIF 199
P + K Y+ D+++ G + EL P S+++++ + IF
Sbjct: 193 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---LPYSNINNRDQIIF 240
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,690,871
Number of Sequences: 62578
Number of extensions: 377696
Number of successful extensions: 4044
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1043
Number of HSP's gapped (non-prelim): 1249
length of query: 282
length of database: 14,973,337
effective HSP length: 98
effective length of query: 184
effective length of database: 8,840,693
effective search space: 1626687512
effective search space used: 1626687512
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)