BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6045
(105 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NB33|RL44_AEDTR 60S ribosomal protein L44 OS=Aedes triseriatus GN=RpL44 PE=3 SV=3
Length = 104
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/99 (89%), Positives = 94/99 (94%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPKQRRT+CKKCK+H+VHKVTQYKKSKERKA QGRRRYDRKQ G+GGQTKPIFRKKAK
Sbjct: 2 VNVPKQRRTYCKKCKVHRVHKVTQYKKSKERKASQGRRRYDRKQKGFGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLRMEC +CKYRKQ PLKRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRMECVDCKYRKQTPLKRCKHFELGGDKKRKGQ 100
>sp|P48166|RL44_CAEEL 60S ribosomal protein L44 OS=Caenorhabditis elegans GN=rpl-41 PE=3
SV=2
Length = 105
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/101 (79%), Positives = 87/101 (86%), Gaps = 1/101 (0%)
Query: 4 VNVPKQRRTFCK-KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKA 62
VNVPK RRTFC KC+ H HKVTQYKK KE K QGRRRYDRKQ+G+GGQTKPIFRKKA
Sbjct: 2 VNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKA 61
Query: 63 KTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
KTTKKIVLRMECTECK++KQLP+KRCKHFELGG KK + Q
Sbjct: 62 KTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQV 102
>sp|P90702|RL44_BRUMA 60S ribosomal protein L44 OS=Brugia malayi GN=rpl-44 PE=3 SV=3
Length = 105
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/101 (78%), Positives = 86/101 (85%), Gaps = 1/101 (0%)
Query: 4 VNVPKQRRTFCK-KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKA 62
VNVPK RRTFC KC+ H +HKVTQYKK KE + QGRRRYD KQ G+GGQTKPIFRKKA
Sbjct: 2 VNVPKTRRTFCDGKCRRHTMHKVTQYKKGKESRLAQGRRRYDSKQKGFGGQTKPIFRKKA 61
Query: 63 KTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
KTTKKIVLRMECTECK+RKQLP+KRCKHFELGG KK + Q
Sbjct: 62 KTTKKIVLRMECTECKHRKQLPIKRCKHFELGGQKKTRGQV 102
>sp|Q969Q0|RL36L_HUMAN 60S ribosomal protein L36a-like OS=Homo sapiens GN=RPL36AL PE=1
SV=3
Length = 106
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/102 (75%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTFCKKC H+ HKVTQYKK K+ QGRRRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQT 103
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQV 103
>sp|P61486|RL36A_TAKRU 60S ribosomal protein L36a OS=Takifugu rubripes GN=rpl36a PE=3 SV=2
Length = 106
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 86/102 (84%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRT+CKKCK H+ HKVTQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTYCKKCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQT 103
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQV 103
>sp|P61487|RL36A_ICTPU 60S ribosomal protein L36a OS=Ictalurus punctatus GN=rpl36a PE=3
SV=2
Length = 106
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 86/102 (84%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRT+CKKCK H+ HKVTQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTYCKKCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQT 103
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQV 103
>sp|P61485|RL36A_DANRE 60S ribosomal protein L36a OS=Danio rerio GN=rpl36a PE=2 SV=2
Length = 106
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 86/102 (84%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRT+CKKCK H+ HKVTQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTYCKKCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQT 103
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQV 103
>sp|P83883|RL36A_RAT 60S ribosomal protein L36a OS=Rattus norvegicus GN=Rpl36a PE=1 SV=2
Length = 106
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTFCKKC H+ HKVTQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQT 103
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQV 103
>sp|P83884|RL36A_PIG 60S ribosomal protein L36a OS=Sus scrofa GN=RPL36A PE=3 SV=2
Length = 106
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTFCKKC H+ HKVTQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQT 103
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQV 103
>sp|P83882|RL36A_MOUSE 60S ribosomal protein L36a OS=Mus musculus GN=Rpl36a PE=3 SV=2
Length = 106
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTFCKKC H+ HKVTQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQT 103
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQV 103
>sp|P83881|RL36A_HUMAN 60S ribosomal protein L36a OS=Homo sapiens GN=RPL36A PE=1 SV=2
Length = 106
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTFCKKC H+ HKVTQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQT 103
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQV 103
>sp|D0VWQ4|RL36A_CANFA 60S ribosomal protein L36a OS=Canis familiaris GN=Rpl36a PE=1 SV=1
Length = 106
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTFCKKC H+ HKVTQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQT 103
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQV 103
>sp|Q3SZ59|RL36A_BOVIN 60S ribosomal protein L36a OS=Bos taurus GN=RPL36A PE=2 SV=3
Length = 106
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTFCKKC H+ HKVTQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQT 103
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQV 103
>sp|Q5R9D2|RL36L_PONAB 60S ribosomal protein L36a-like OS=Pongo abelii GN=RPL36AL PE=3
SV=3
Length = 106
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/102 (74%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTFCKKC H+ HKVTQYKK K+ QGRRRYDRK++GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKRSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQT 103
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQV 103
>sp|O23290|RL36A_ARATH 60S ribosomal protein L36a OS=Arabidopsis thaliana GN=RPL36AA PE=2
SV=3
Length = 105
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 82/99 (82%), Gaps = 2/99 (2%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VN+PK + T+CK +CK H +HKVTQYKK K+ A QG+RRYDRKQ+GYGGQTKP+F KK
Sbjct: 2 VNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
AKTTKKIVLR++C CK+ Q P+KRCKHFE+GGDKK K
Sbjct: 62 AKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGK 100
>sp|Q96499|RL44_GOSHI 60S ribosomal protein L44 OS=Gossypium hirsutum GN=RPL44 PE=3 SV=3
Length = 105
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 83/99 (83%), Gaps = 2/99 (2%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK ++T+CK +C+ H +HKVTQYKK K+ A QG+RRYDRKQ+GYGGQTKP+F KK
Sbjct: 2 VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
AKTTKKIVLR++C CK+ Q P+KRCKHFE+GGDKK K
Sbjct: 62 AKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK 100
>sp|P27074|RL44Q_CANMA 60S ribosomal protein L44 Q OS=Candida maltosa GN=RIM-C PE=3 SV=2
Length = 106
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 81/102 (79%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCKK--CKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VN+PK R T+CK C+ H +HKVTQYK + QG+RRYDRKQ+GYGGQTK +F KK
Sbjct: 2 VNIPKTRNTYCKGKGCRKHTIHKVTQYKSGRASLFAQGKRRYDRKQSGYGGQTKQVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
AKTTKKIVL++ECT CK +KQLPLKRCKH ELGG+KK+K Q
Sbjct: 62 AKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKGQA 103
>sp|P27075|RL44_CANTR 60S ribosomal protein L44 OS=Candida tropicalis GN=RPL44 PE=3 SV=2
Length = 106
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 81/102 (79%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCKK--CKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VN+PK R T+CK C+ H +HKVTQYK + QG+RRYDRKQ+GYGGQTK +F KK
Sbjct: 2 VNIPKTRNTYCKGKGCRKHTIHKVTQYKAGRASLFAQGKRRYDRKQSGYGGQTKQVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
AKTTKKIVL++ECT CK +KQLPLKRCKH ELGG+KK+K Q
Sbjct: 62 AKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKGQA 103
>sp|A9L948|RL36A_PAPAN 60S ribosomal protein L36a OS=Papio anubis GN=RPL36A PE=3 SV=1
Length = 106
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 78/102 (76%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK R+TFCKK H+ HKVTQYKK K+ G+RRYDRKQ+GYGG TKPIF KKAK
Sbjct: 2 VNVPKTRQTFCKKYDKHQPHKVTQYKKGKDSLYALGKRRYDRKQSGYGGHTKPIFWKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQT 103
TTKKIVLR+EC E C+ + L KRCKHFELGGDK RK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSERMLATKRCKHFELGGDKTRKGQV 103
>sp|P49213|RL44_CHLRE 60S ribosomal protein L44 OS=Chlamydomonas reinhardtii GN=RPL44
PE=3 SV=2
Length = 99
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/96 (69%), Positives = 75/96 (78%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK +R FCK CK H + KVTQYK K QG+RRYDRKQ+GYGGQTKP+F KKAK
Sbjct: 2 VNVPKTKRAFCKGCKKHMMMKVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHKKAK 61
Query: 64 TTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKR 99
TTKKIVLRM+C ECK LKRCKHFE+GGDKK+
Sbjct: 62 TTKKIVLRMQCQECKQTCMKGLKRCKHFEIGGDKKK 97
>sp|Q55CW5|RL36A_DICDI 60S ribosomal protein L36a OS=Dictyostelium discoideum GN=rpl36a
PE=3 SV=2
Length = 103
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/97 (69%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VN+PK R+T C KC H HKVTQYK K QG+RRYDRKQ+G+GGQTKP+F KKAK
Sbjct: 2 VNIPKARKTHCVKCNKHTPHKVTQYKAGKPSLFAQGKRRYDRKQSGFGGQTKPVFHKKAK 61
Query: 64 TTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
TTKKIVLRMEC+ C Y+KQ LKRCK FELGG+KK K
Sbjct: 62 TTKKIVLRMECS-CGYKKQQVLKRCKRFELGGEKKSK 97
>sp|Q8SR18|RL44_ENCCU 60S ribosomal protein L44 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL44 PE=3 SV=1
Length = 104
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 76/102 (74%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VN+PK R TFCKKCK + HKV+Q KKSK+ QG RRY RKQ GYGGQTKPI R+KAK
Sbjct: 2 VNIPKTRNTFCKKCKGYSAHKVSQAKKSKDNPRAQGNRRYARKQRGYGGQTKPILRRKAK 61
Query: 64 TTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQTKI 105
TKK+VL +ECT+CK+ Q PLKR KH GG++KRK + +
Sbjct: 62 VTKKLVLNLECTKCKFSHQKPLKRAKHVIFGGERKRKGEALV 103
>sp|O59870|RL44_PHARH 60S ribosomal protein L44 OS=Phaffia rhodozyma GN=RPL44 PE=3 SV=3
Length = 106
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/99 (72%), Positives = 82/99 (82%), Gaps = 2/99 (2%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK RRT+CK CK H HKVTQYKK K+ QG+RRYDRKQ+GYGGQTKP+F KK
Sbjct: 2 VNVPKTRRTYCKGKACKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
AKTTKK+VLR+EC+ CKY+ Q+ LKRCKHFELGGDKK K
Sbjct: 62 AKTTKKVVLRLECSVCKYKMQMTLKRCKHFELGGDKKTK 100
>sp|P0CQ50|RL44_CRYNJ 60S ribosomal protein L44 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RPL44 PE=3 SV=1
Length = 106
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 83/99 (83%), Gaps = 2/99 (2%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VN+PK RRT+CK C+ H HKVTQYKK K+ + QG+RRYDRKQ+GYGGQTKP+F KK
Sbjct: 2 VNIPKTRRTYCKGKACRKHTPHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
AKTTKK+VLR+ECT CK + QL LKRCKHFELGGDKK++
Sbjct: 62 AKTTKKVVLRLECTVCKTKHQLALKRCKHFELGGDKKQR 100
>sp|P0CQ51|RL44_CRYNB 60S ribosomal protein L44 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RPL44 PE=3
SV=1
Length = 106
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 83/99 (83%), Gaps = 2/99 (2%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VN+PK RRT+CK C+ H HKVTQYKK K+ + QG+RRYDRKQ+GYGGQTKP+F KK
Sbjct: 2 VNIPKTRRTYCKGKACRKHTPHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
AKTTKK+VLR+ECT CK + QL LKRCKHFELGGDKK++
Sbjct: 62 AKTTKKVVLRLECTVCKTKHQLALKRCKHFELGGDKKQR 100
>sp|Q9UWE4|RL44_COPCI 60S ribosomal protein L44 OS=Coprinopsis cinerea GN=RPL44 PE=3 SV=3
Length = 106
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 82/99 (82%), Gaps = 2/99 (2%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VN+PK RRT+CK CK H HKVTQYKK K+ QG+RRYDRKQ+GYGGQTKP+F KK
Sbjct: 2 VNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
AKTTKK+VLR+ECT CKY+ Q+ LKRCKHFELGG+KK K
Sbjct: 62 AKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTK 100
>sp|A8PCG3|RL44_COPC7 60S ribosomal protein L44 OS=Coprinopsis cinerea (strain Okayama-7
/ 130 / ATCC MYA-4618 / FGSC 9003) GN=RPL44 PE=3 SV=2
Length = 106
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 82/99 (82%), Gaps = 2/99 (2%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VN+PK RRT+CK CK H HKVTQYKK K+ QG+RRYDRKQ+GYGGQTKP+F KK
Sbjct: 2 VNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
AKTTKK+VLR+ECT CKY+ Q+ LKRCKHFELGG+KK K
Sbjct: 62 AKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTK 100
>sp|Q9UTI8|RL44_SCHPO 60S ribosomal protein L42 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl42 PE=1 SV=3
Length = 106
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 81/99 (81%), Gaps = 2/99 (2%)
Query: 4 VNVPKQRRTFC--KKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VN+PK R+T+C K C+ H VH+VTQYKK + K QG+RRYDRKQ+G+GGQTKP+F KK
Sbjct: 2 VNIPKTRKTYCPGKNCRKHTVHRVTQYKKGPDSKLAQGKRRYDRKQSGFGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
AK TKK+VLR+EC CKY+ QL LKRCKHFELGG+KK K
Sbjct: 62 AKVTKKVVLRLECVSCKYKNQLVLKRCKHFELGGEKKTK 100
>sp|P52809|RL44_CYBJA 60S ribosomal protein L44 OS=Cyberlindnera jadinii GN=RPL44 PE=3
SV=2
Length = 106
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/102 (69%), Positives = 81/102 (79%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK RRT+CK +C+ H HKVTQYK K QG+RRYDRKQ+GYGGQTKP+F KK
Sbjct: 2 VNVPKTRRTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
AKTTKK+VLR+EC CK + QL LKRCKHFELGGDKK+K Q
Sbjct: 62 AKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKGQA 103
>sp|Q4PNY0|RL44_CANGY 60S ribosomal protein L44 OS=Candida glycerinogenes GN=RPL44 PE=3
SV=3
Length = 106
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 80/99 (80%), Gaps = 2/99 (2%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK R+T+CK +CK H HKVTQYK K QG+RRYDRKQ+GYGGQTKP+F KK
Sbjct: 2 VNVPKTRKTYCKGKQCKKHTQHKVTQYKAGKASLYSQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
AKTTKK+VLR+EC CK + QL LKRCKHFELGGDKK+K
Sbjct: 62 AKTTKKVVLRLECVACKTKLQLSLKRCKHFELGGDKKQK 100
>sp|P31866|RL44_PICGU 60S ribosomal protein L44 OS=Meyerozyma guilliermondii (strain ATCC
6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL
Y-324) GN=RPL44 PE=3 SV=3
Length = 106
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 80/102 (78%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK RRT+CK C+ H HKVTQYK K QG+RRYDRKQ+G+GGQTKP+F KK
Sbjct: 2 VNVPKTRRTYCKGKDCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
AKTTKK+VLR+EC CK + QL LKRCKHFELGGDKK+K Q
Sbjct: 62 AKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDKKQKGQA 103
>sp|Q6BLK0|RL44_DEBHA 60S ribosomal protein L44 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RPL44 PE=3 SV=3
Length = 106
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/102 (69%), Positives = 80/102 (78%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK RRT+CK +C+ H HKVTQYK K QG+RRYDRKQ GYGGQTKP+F KK
Sbjct: 2 VNVPKTRRTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQKGYGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
AKTTKK+VLR+EC CK + QL LKRCKHFELGGDKK+K Q
Sbjct: 62 AKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDKKQKGQA 103
>sp|Q754N8|RL44_ASHGO 60S ribosomal protein L44 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL44 PE=3 SV=3
Length = 106
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 81/102 (79%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK R+T+CK C+ H HKVTQYK K QG+RRYDRKQ+G+GGQTK IFRKK
Sbjct: 2 VNVPKTRKTYCKGKACRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKQIFRKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
AKTTKK+VLR+EC CK + QLPLKRCKHFELGG+KK+K Q
Sbjct: 62 AKTTKKVVLRLECLSCKTKAQLPLKRCKHFELGGEKKQKGQA 103
>sp|Q00477|RL44P_CANMA 60S ribosomal protein L44 P OS=Candida maltosa GN=L41P1A PE=3 SV=3
Length = 106
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 81/102 (79%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK R+T+CK +C+ H HKVTQYK K QG+RRYDRKQ+G+GGQTKP+F KK
Sbjct: 2 VNVPKTRKTYCKGRECRKHSQHKVTQYKAGKSSLFAQGKRRYDRKQSGFGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
AKTTKK+VLR+EC CK + QL LKRCKHFELGGDKK+K Q
Sbjct: 62 AKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKGQA 103
>sp|Q9UVB8|RL44_WICCF 60S ribosomal protein L44 OS=Wickerhamomyces ciferrii (strain
F-60-10 / ATCC 14091 / CBS 111 / JCM 3599 / NBRC 0793 /
NRRL Y-1031) GN=RPL44 PE=3 SV=3
Length = 106
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 81/102 (79%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK R+T+CK +C+ H HKVTQYK K QG+RRYDRKQ+GYGGQTKP+F KK
Sbjct: 2 VNVPKTRKTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
AKTTKK+VLR+EC CK + QL LKRCKHFELGGD+K+K Q
Sbjct: 62 AKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDRKQKGQA 103
>sp|P0CX28|RL44B_YEAST 60S ribosomal protein L42-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL42B PE=1 SV=1
Length = 106
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 81/102 (79%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK R+T+CK C+ H HKVTQYK K QG+RRYDRKQ+G+GGQTKP+F KK
Sbjct: 2 VNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
AKTTKK+VLR+EC +CK R QL LKRCKHFELGG+KK+K Q
Sbjct: 62 AKTTKKVVLRLECVKCKTRAQLTLKRCKHFELGGEKKQKGQA 103
>sp|P0CX27|RL44A_YEAST 60S ribosomal protein L42-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL42A PE=1 SV=1
Length = 106
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 81/102 (79%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK R+T+CK C+ H HKVTQYK K QG+RRYDRKQ+G+GGQTKP+F KK
Sbjct: 2 VNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
AKTTKK+VLR+EC +CK R QL LKRCKHFELGG+KK+K Q
Sbjct: 62 AKTTKKVVLRLECVKCKTRAQLTLKRCKHFELGGEKKQKGQA 103
>sp|Q6CFS7|RL44_YARLI 60S ribosomal protein L44 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=RPL44 PE=3 SV=3
Length = 106
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 80/102 (78%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VN+PK R T+CK +C+ H HKVTQYK K QG+RRYDRKQ+GYGGQTK IF KK
Sbjct: 2 VNIPKTRNTYCKGKECRKHTQHKVTQYKAGKASLYAQGKRRYDRKQSGYGGQTKQIFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
AKTTKK+VLR+EC +CK + QL LKRCKHFELGGDKK+K Q
Sbjct: 62 AKTTKKVVLRLECVKCKVKMQLALKRCKHFELGGDKKQKGQA 103
>sp|P31027|RL44_KLULA 60S ribosomal protein L44 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RPL44 PE=3 SV=2
Length = 106
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 80/102 (78%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK R+T+CK +C+ H HKVTQYK K QG+RRYDRKQ+G+GGQTK IF KK
Sbjct: 2 VNVPKTRKTYCKGKECRKHAQHKVTQYKAGKASLYAQGKRRYDRKQSGFGGQTKQIFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
AKTTKK+VLR+EC CK + QL LKRCKHFELGG+KK+K Q
Sbjct: 62 AKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGEKKQKGQA 103
>sp|P27076|RL44_KLUMA 60S ribosomal protein L44 OS=Kluyveromyces marxianus GN=RPL44 PE=3
SV=2
Length = 106
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK R+T+CK C+ H HKVTQYK K QG+RRYDRKQ+G+GGQTK IF KK
Sbjct: 2 VNVPKTRKTYCKGKACRKHSQHKVTQYKAGKASLYAQGKRRYDRKQSGFGGQTKQIFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
AKTTKK+VLR+EC CK + QL LKRCKHFELGG+KK+K Q
Sbjct: 62 AKTTKKVVLRLECMSCKTKTQLALKRCKHFELGGEKKQKGQA 103
>sp|P31028|RL44_SCHOC 60S ribosomal protein L44 OS=Schwanniomyces occidentalis GN=RPL44
PE=3 SV=2
Length = 106
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
Query: 4 VNVPKQRRTFCK--KCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK R+T+CK +C+ H HKVTQYK K QG+RRYDRKQ GYGGQTK IF KK
Sbjct: 2 VNVPKTRKTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQRGYGGQTKQIFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQT 103
AKTTKK+VL++EC CK + QL LKRCKHFELGGDKK+K Q
Sbjct: 62 AKTTKKVVLKLECVVCKTKAQLSLKRCKHFELGGDKKQKGQA 103
>sp|O97231|RL44_PLAF7 60S ribosomal protein L44 OS=Plasmodium falciparum (isolate 3D7)
GN=RPL44 PE=3 SV=3
Length = 104
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
Query: 4 VNVPKQRRTFC-KKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKA 62
VNVPK R+T+C KCK H +HKV+QYKK KER + GRRRYD KQ G+GGQTKP+F+KKA
Sbjct: 2 VNVPKTRKTYCSNKCKKHTMHKVSQYKKGKERLSSLGRRRYDMKQKGFGGQTKPVFKKKA 61
Query: 63 KTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
KTTKKIVL++ECT+CK ++ +KRCK FE+G DKK+K
Sbjct: 62 KTTKKIVLKLECTKCKKKRFQTMKRCKTFEMGADKKKK 99
>sp|P17843|RL44_TRYBB 60S ribosomal protein L44 OS=Trypanosoma brucei brucei GN=RPL44
PE=3 SV=3
Length = 106
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 2/97 (2%)
Query: 4 VNVPKQRRTFC--KKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VN PK+++ C ++C HK KV QYK K R +G+RRYDRKQ+GYGGQTKPIF KK
Sbjct: 2 VNYPKKKKMHCPDERCNAHKSFKVVQYKAGKARLYARGKRRYDRKQSGYGGQTKPIFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKK 98
AKTTKKIVL+++C+ CK Q LKR KHFEL KK
Sbjct: 62 AKTTKKIVLKLQCSNCKSIIQNVLKRTKHFELNDKKK 98
>sp|Q22X38|RL36A_TETTS 60S ribosomal protein L36a OS=Tetrahymena thermophila (strain
SB210) GN=RPL36A PE=1 SV=1
Length = 109
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 70/86 (81%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
V VPK R+T+CKKC H HKV+QYKKSKE QGRRRYD KQ+G+GGQTKPIFRKKAK
Sbjct: 2 VQVPKTRKTYCKKCNSHTNHKVSQYKKSKESTHAQGRRRYDMKQSGFGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTECKYRKQLPLKRCK 89
TTKK+ L+ +CT CK ++ +P+KRCK
Sbjct: 62 TTKKVALKFDCTTCKTKRVIPIKRCK 87
>sp|B8D537|RL44E_DESK1 50S ribosomal protein L44e OS=Desulfurococcus kamchatkensis (strain
1221n / DSM 18924) GN=rpl44e PE=3 SV=2
Length = 103
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
+ +PK T+C KC+ H H VT YK K R +G RRY RK+ GYG + KP ++ AK
Sbjct: 8 LRIPKVIITYCPKCRTHTEHSVTIYKHGKRRSLSEGERRYARKKKGYGSKRKPEQKRFAK 67
Query: 64 TTKKIVLRMECTECKY---RKQLPLKRCKHFELGG 95
TKK VL+++C++C Y R+ + LK+ + E+GG
Sbjct: 68 VTKKTVLKLKCSKCGYIIHREGIRLKKAELVEVGG 102
>sp|Q9YF00|RL44E_AERPE 50S ribosomal protein L44e OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=rpl44e PE=3 SV=2
Length = 95
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 50/87 (57%)
Query: 7 PKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAKTTK 66
PK+ RT+C +C H H+V QY+ K R G RRY RKQ GYG Q +P ++ AK TK
Sbjct: 4 PKRIRTYCPRCNTHTEHRVAQYRAGKRRAMALGERRYRRKQEGYGSQRRPEQKRFAKVTK 63
Query: 67 KIVLRMECTECKYRKQLPLKRCKHFEL 93
K VL + CT C ++ R K EL
Sbjct: 64 KQVLVITCTVCGRKRPFLGIRLKRLEL 90
>sp|Q9HIX1|RL44E_THEAC 50S ribosomal protein L44e OS=Thermoplasma acidophilum (strain
ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=rpl44e PE=3 SV=1
Length = 93
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
+ +PK+ T+C CK H H V + +K K + G+RR+ R +GYGG +P F + K
Sbjct: 1 MKMPKKIMTYCPYCKKHTSHSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREK 60
Query: 64 TTKKIVLRMECTECKYRKQLPLKRCKHFEL 93
TK+I LR+ C EC P R K FE+
Sbjct: 61 PTKRIALRLVCDECHKAITPPGIRAKKFEI 90
>sp|F2L1X6|RL44E_THEU7 50S ribosomal protein L44e OS=Thermoproteus uzoniensis (strain
768-20) GN=rpl44e PE=3 SV=1
Length = 84
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%)
Query: 12 TFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAKTTKKIVLR 71
+C +C + H V+ Y + K R+ +G+RRY+RK GYG KP ++ AK KKI L
Sbjct: 2 AYCPRCNTYTEHSVSIYHQGKRRELAEGQRRYNRKLKGYGSSPKPKQKRFAKVNKKISLV 61
Query: 72 MECTECKYRKQLPLKRCKHFEL 93
+ C++C Y+ L R K EL
Sbjct: 62 LTCSKCGYKLHKSLGRMKRVEL 83
>sp|Q8U475|RL44E_PYRFU 50S ribosomal protein L44e OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl44e PE=1 SV=1
Length = 94
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
+ PKQ RT+C CK H +HKV + KK + G+RR+ R GYGG +P + K
Sbjct: 1 MKYPKQIRTYCPFCKKHTIHKVERVKKRPRSELSAGQRRFRRILKGYGGFPRPKPEGREK 60
Query: 64 TTKKIVLRMECTEC 77
KK+ LR CTEC
Sbjct: 61 PVKKLDLRFRCTEC 74
>sp|P54027|RL44E_METJA 50S ribosomal protein L44e OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=rpl44e PE=3 SV=1
Length = 94
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 4 VNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
+ +PK+ R +C CK H +H V + KK K + G+R++ R AGYGG +P+ ++K
Sbjct: 1 MKIPKKVRRYCPYCKKHTIHIVEKAKKGKPSELTWGQRQFRRVTAGYGGFPRPL-PDRSK 59
Query: 64 TTKKIVLRMECTEC 77
KKI LR +CTEC
Sbjct: 60 PVKKIDLRFKCTEC 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.134 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,997,438
Number of Sequences: 539616
Number of extensions: 1286061
Number of successful extensions: 3260
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 3133
Number of HSP's gapped (non-prelim): 100
length of query: 105
length of database: 191,569,459
effective HSP length: 74
effective length of query: 31
effective length of database: 151,637,875
effective search space: 4700774125
effective search space used: 4700774125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)