Your job contains 1 sequence.
>psy6045
MSHVNVPKQRRTFCKKCKIHKVHKVTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRK
KAKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQTKI
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6045
(105 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031980 - symbol:RpL36A "Ribosomal protein L36A" s... 418 3.7e-39 1
WB|WBGene00004454 - symbol:rpl-41 species:6239 "Caenorhab... 375 1.3e-34 1
UNIPROTKB|H0Y5B4 - symbol:RPL36A "60S ribosomal protein L... 349 7.7e-32 1
UNIPROTKB|Q969Q0 - symbol:RPL36AL "60S ribosomal protein ... 348 9.8e-32 1
UNIPROTKB|J3KQN4 - symbol:RPL36A "60S ribosomal protein L... 347 1.3e-31 1
UNIPROTKB|H7BZ11 - symbol:H7BZ11 "Uncharacterized protein... 346 1.6e-31 1
UNIPROTKB|G3N2Y0 - symbol:RPL36AL "Uncharacterized protei... 345 2.0e-31 1
UNIPROTKB|Q3SZ59 - symbol:RPL36A "60S ribosomal protein L... 345 2.0e-31 1
UNIPROTKB|D0VWQ4 - symbol:Rpl36a "60S ribosomal protein L... 345 2.0e-31 1
UNIPROTKB|P83881 - symbol:RPL36A "60S ribosomal protein L... 345 2.0e-31 1
UNIPROTKB|P83884 - symbol:RPL36A "60S ribosomal protein L... 345 2.0e-31 1
RGD|1306640 - symbol:Rpl36a "ribosomal protein L36a" spec... 345 2.0e-31 1
RGD|621156 - symbol:Rpl36al "ribosomal protein L36a-like"... 345 2.0e-31 1
ZFIN|ZDB-GENE-020423-1 - symbol:rpl36a "ribosomal protein... 342 4.2e-31 1
UNIPROTKB|J9NU47 - symbol:LOC100687687 "Uncharacterized p... 336 1.8e-30 1
UNIPROTKB|F1NIK4 - symbol:LOC100859914 "Uncharacterized p... 335 2.3e-30 1
ASPGD|ASPL0000001539 - symbol:AN6181 species:162425 "Emer... 333 3.8e-30 1
UNIPROTKB|G4NBG4 - symbol:MGG_00546 "60S ribosomal protei... 333 3.8e-30 1
UNIPROTKB|F1MG09 - symbol:F1MG09 "Uncharacterized protein... 326 2.1e-29 1
POMBASE|SPAC15E1.03 - symbol:rpl42 "60S ribosomal protein... 326 2.1e-29 1
RGD|6496910 - symbol:LOC100910714 "60S ribosomal protein ... 326 2.1e-29 1
TAIR|locus:2090885 - symbol:AT3G23390 species:3702 "Arabi... 323 4.4e-29 1
SGD|S000005106 - symbol:RPL42A "Ribosomal 60S subunit pro... 321 7.1e-29 1
SGD|S000001183 - symbol:RPL42B "Ribosomal 60S subunit pro... 321 7.1e-29 1
UNIPROTKB|G8JL02 - symbol:G8JL02 "Uncharacterized protein... 320 9.1e-29 1
RGD|1563431 - symbol:RGD1563431 "similar to large subunit... 320 9.1e-29 1
UNIPROTKB|J9JHU1 - symbol:J9JHU1 "Uncharacterized protein... 319 1.2e-28 1
UNIPROTKB|F8WFR5 - symbol:RGD1566373 "Protein RGD1566373"... 317 1.9e-28 1
UNIPROTKB|G3N147 - symbol:G3N147 "Uncharacterized protein... 310 1.0e-27 1
UNIPROTKB|J9P9C5 - symbol:LOC610388 "Uncharacterized prot... 310 1.0e-27 1
UNIPROTKB|J9NWR0 - symbol:J9NWR0 "Uncharacterized protein... 277 1.7e-27 2
UNIPROTKB|J9P6P5 - symbol:J9P6P5 "Uncharacterized protein... 306 2.8e-27 1
DICTYBASE|DDB_G0270984 - symbol:rpl36a "S60 ribosomal pro... 305 3.5e-27 1
RGD|1564617 - symbol:RGD1564617 "similar to large subunit... 299 1.5e-26 1
UNIPROTKB|J9P1B4 - symbol:LOC100688104 "Uncharacterized p... 291 1.1e-25 1
UNIPROTKB|F1RT21 - symbol:F1RT21 "Uncharacterized protein... 279 2.0e-24 1
UNIPROTKB|F1M8T2 - symbol:F1M8T2 "Uncharacterized protein... 250 2.4e-21 1
UNIPROTKB|H7BY91 - symbol:RPL36A "60S ribosomal protein L... 189 6.9e-15 1
UNIPROTKB|H0Y3V9 - symbol:H0Y3V9 "Uncharacterized protein... 186 1.4e-14 1
UNIPROTKB|I3LHT5 - symbol:I3LHT5 "Uncharacterized protein... 156 2.2e-11 1
>FB|FBgn0031980 [details] [associations]
symbol:RpL36A "Ribosomal protein L36A" species:7227
"Drosophila melanogaster" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0000022 "mitotic spindle elongation" evidence=IMP]
InterPro:IPR000552 InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841
PROSITE:PS01172 EMBL:AE014134 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0000022 SUPFAM:SSF57829 KO:K02929 OMA:QKGQALQ
Gene3D:3.10.450.80 PANTHER:PTHR10369 CTD:6173
GeneTree:ENSGT00390000018085 ChiTaRS:RPL36A UniGene:Dm.34751
EMBL:BT029953 RefSeq:NP_609179.2 UniGene:Dm.7214 SMR:Q9VLT7
IntAct:Q9VLT7 MINT:MINT-797794 STRING:Q9VLT7
EnsemblMetazoa:FBtr0079546 GeneID:34098 KEGG:dme:Dmel_CG7424
UCSC:CG7424-RA FlyBase:FBgn0031980 InParanoid:Q9VLT7
OrthoDB:EOG4612MN GenomeRNAi:34098 NextBio:786858 Uniprot:Q9VLT7
Length = 104
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 81/99 (81%), Positives = 82/99 (82%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPKQRRTF TQYKKSKERK QGRRRYDRKQ G+GGQTKPIFRKKAK
Sbjct: 2 VNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLRMECTECKYRKQ PLKRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKRKGQ 100
>WB|WBGene00004454 [details] [associations]
symbol:rpl-41 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] InterPro:IPR000552
InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0006412
GO:GO:0018996 GO:GO:0040018 GO:GO:0005840 GO:GO:0040035
GO:GO:0003735 SUPFAM:SSF57829 eggNOG:COG1631 HOGENOM:HOG000224989
KO:K02929 OMA:QKGQALQ Gene3D:3.10.450.80 PANTHER:PTHR10369
GeneTree:ENSGT00390000018085 EMBL:Z50109 EMBL:AF304121 PIR:T19159
RefSeq:NP_496375.1 UniGene:Cel.22880 ProteinModelPortal:P48166
SMR:P48166 STRING:P48166 PaxDb:P48166 EnsemblMetazoa:C09H10.2.1
EnsemblMetazoa:C09H10.2.2 EnsemblMetazoa:C09H10.2.3 GeneID:174695
KEGG:cel:CELE_C09H10.2 UCSC:C09H10.2.3 CTD:174695 WormBase:C09H10.2
InParanoid:P48166 NextBio:885110 Uniprot:P48166
Length = 105
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 73/100 (73%), Positives = 79/100 (79%)
Query: 4 VNVPKQRRTFXXXX-XXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKA 62
VNVPK RRTF TQYKK KE K QGRRRYDRKQ+G+GGQTKPIFRKKA
Sbjct: 2 VNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKA 61
Query: 63 KTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQ 102
KTTKKIVLRMECTECK++KQLP+KRCKHFELGG KK + Q
Sbjct: 62 KTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQ 101
>UNIPROTKB|H0Y5B4 [details] [associations]
symbol:RPL36A "60S ribosomal protein L36a" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AL035422 SUPFAM:SSF57829
Gene3D:3.10.450.80 PANTHER:PTHR10369 HGNC:HGNC:10359 ChiTaRS:RPL36A
Ensembl:ENST00000392994 Uniprot:H0Y5B4
Length = 131
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 69/102 (67%), Positives = 77/102 (75%)
Query: 2 SHVNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
S VNVPK RRTF TQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKK
Sbjct: 19 SMVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKK 78
Query: 62 AKTTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKV 101
AKTTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRKV
Sbjct: 79 AKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKV 120
>UNIPROTKB|Q969Q0 [details] [associations]
symbol:RPL36AL "60S ribosomal protein L36a-like"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR000552
InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829
eggNOG:COG1631 HOGENOM:HOG000224989 KO:K02929 OMA:QKGQALQ
Gene3D:3.10.450.80 PANTHER:PTHR10369 HOVERGEN:HBG056127
OrthoDB:EOG4Q2DH0 CTD:6166 EMBL:M15661 EMBL:AB063609 EMBL:CR542166
EMBL:BC000741 EMBL:BC003145 EMBL:BC070207 EMBL:BC107716
IPI:IPI00056494 PIR:A25560 RefSeq:NP_000992.1 UniGene:Hs.444749
ProteinModelPortal:Q969Q0 SMR:Q969Q0 IntAct:Q969Q0 STRING:Q969Q0
PhosphoSite:Q969Q0 DMDM:57013007 PaxDb:Q969Q0 PRIDE:Q969Q0
DNASU:6166 Ensembl:ENST00000298289 GeneID:6166 KEGG:hsa:6166
UCSC:uc001wwq.1 GeneCards:GC14M050086 HGNC:HGNC:10346 MIM:180469
neXtProt:NX_Q969Q0 PharmGKB:PA34732 InParanoid:Q969Q0
PhylomeDB:Q969Q0 GenomeRNAi:6166 NextBio:23953 Bgee:Q969Q0
CleanEx:HS_RPL36AL Genevestigator:Q969Q0 GermOnline:ENSG00000165502
Uniprot:Q969Q0
Length = 106
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 69/101 (68%), Positives = 76/101 (75%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTF TQYKK K+ QGRRRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ 102
>UNIPROTKB|J3KQN4 [details] [associations]
symbol:RPL36A "60S ribosomal protein L36a" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AL035422 UniGene:Hs.432485
SUPFAM:SSF57829 KO:K02929 Gene3D:3.10.450.80 PANTHER:PTHR10369
CTD:6173 RefSeq:NP_066357.2 UniGene:Hs.655348 GeneID:6173
KEGG:hsa:6173 HGNC:HGNC:10359 ChiTaRS:RPL36A
ProteinModelPortal:J3KQN4 Ensembl:ENST00000427805 OMA:PTDSHEE
Uniprot:J3KQN4
Length = 142
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 69/103 (66%), Positives = 77/103 (74%)
Query: 2 SHVNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
S VNVPK RRTF TQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKK
Sbjct: 36 SMVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKK 95
Query: 62 AKTTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
AKTTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 96 AKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ 138
>UNIPROTKB|H7BZ11 [details] [associations]
symbol:H7BZ11 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AL035422 SUPFAM:SSF57829
Gene3D:3.10.450.80 PANTHER:PTHR10369 Ensembl:ENST00000409170
OMA:XSFRADS Uniprot:H7BZ11
Length = 129
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 68/102 (66%), Positives = 77/102 (75%)
Query: 2 SHVNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
S VNVPK RRTF TQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKK
Sbjct: 11 SMVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKK 70
Query: 62 AKTTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKV 101
AKTTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK+
Sbjct: 71 AKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKL 112
>UNIPROTKB|G3N2Y0 [details] [associations]
symbol:RPL36AL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 Gene3D:3.10.450.80
PANTHER:PTHR10369 GeneTree:ENSGT00390000018085 EMBL:DAAA02070771
Ensembl:ENSBTAT00000063926 OMA:TRKQSGY Uniprot:G3N2Y0
Length = 129
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 68/101 (67%), Positives = 76/101 (75%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTF TQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 25 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 84
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 85 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ 125
>UNIPROTKB|Q3SZ59 [details] [associations]
symbol:RPL36A "60S ribosomal protein L36a" species:9913
"Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 eggNOG:COG1631
HOGENOM:HOG000224989 KO:K02929 OMA:QKGQALQ Gene3D:3.10.450.80
PANTHER:PTHR10369 EMBL:BC103119 EMBL:BC142008 IPI:IPI00709741
RefSeq:NP_001029488.1 UniGene:Bt.66081 ProteinModelPortal:Q3SZ59
SMR:Q3SZ59 STRING:Q3SZ59 PRIDE:Q3SZ59 Ensembl:ENSBTAT00000010166
Ensembl:ENSBTAT00000020267 Ensembl:ENSBTAT00000025633 GeneID:508165
KEGG:bta:508165 CTD:6173 GeneTree:ENSGT00390000018085
HOVERGEN:HBG056127 InParanoid:Q3SZ59 OrthoDB:EOG4Q2DH0
NextBio:20790084 ArrayExpress:Q3SZ59 Uniprot:Q3SZ59
Length = 106
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 68/101 (67%), Positives = 76/101 (75%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTF TQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ 102
>UNIPROTKB|D0VWQ4 [details] [associations]
symbol:Rpl36a "60S ribosomal protein L36a" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000552
InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 PDB:2ZKR
PDBsum:2ZKR eggNOG:COG1631 KO:K02929 OMA:QKGQALQ Gene3D:3.10.450.80
PANTHER:PTHR10369 GeneTree:ENSGT00390000018085
RefSeq:XP_003435176.1 RefSeq:XP_537433.1 ProteinModelPortal:D0VWQ4
SMR:D0VWQ4 STRING:D0VWQ4 PRIDE:D0VWQ4 Ensembl:ENSCAFT00000018125
GeneID:480311 KEGG:cfa:480311 CTD:6166 EvolutionaryTrace:D0VWQ4
NextBio:20855348 Uniprot:D0VWQ4
Length = 106
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 68/101 (67%), Positives = 76/101 (75%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTF TQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ 102
>UNIPROTKB|P83881 [details] [associations]
symbol:RPL36A "60S ribosomal protein L36a" species:9606
"Homo sapiens" [GO:0005840 "ribosome" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0006412 "translation"
evidence=NAS;TAS] [GO:0003735 "structural constituent of ribosome"
evidence=NAS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006413 "translational initiation"
evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS]
[GO:0006415 "translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000552 InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841
PROSITE:PS01172 Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413
GO:GO:0003735 EMBL:U78027 EMBL:AL035422 EMBL:CH471115 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 UniGene:Hs.432485 SUPFAM:SSF57829 eggNOG:COG1631
HOGENOM:HOG000224989 KO:K02929 Gene3D:3.10.450.80 PANTHER:PTHR10369
CTD:6173 HOVERGEN:HBG056127 OrthoDB:EOG4Q2DH0 EMBL:AY305871
EMBL:CR542198 EMBL:AY927233 EMBL:BC001781 EMBL:BC031015
EMBL:BC062219 EMBL:BC070204 IPI:IPI00220344 RefSeq:NP_066357.2
UniGene:Hs.655348 ProteinModelPortal:P83881 SMR:P83881
IntAct:P83881 STRING:P83881 PhosphoSite:P83881 DMDM:47117731
PaxDb:P83881 PRIDE:P83881 Ensembl:ENST00000553110 GeneID:6173
KEGG:hsa:6173 UCSC:uc004ehj.2 GeneCards:GC0XP100645
H-InvDB:HIX0016927 H-InvDB:HIX0056232 HGNC:HGNC:10359
neXtProt:NX_P83881 PharmGKB:PA164742367 PhylomeDB:P83881
ChiTaRS:RPL36A GenomeRNAi:6173 NextBio:23983 ArrayExpress:P83881
Bgee:P83881 CleanEx:HS_RPL36A Genevestigator:P83881 Uniprot:P83881
Length = 106
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 68/101 (67%), Positives = 76/101 (75%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTF TQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ 102
>UNIPROTKB|P83884 [details] [associations]
symbol:RPL36A "60S ribosomal protein L36a" species:9823
"Sus scrofa" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000552 InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841
PROSITE:PS01172 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
SUPFAM:SSF57829 eggNOG:COG1631 HOGENOM:HOG000224989 KO:K02929
OMA:QKGQALQ Gene3D:3.10.450.80 PANTHER:PTHR10369
GeneTree:ENSGT00390000018085 HOVERGEN:HBG056127 OrthoDB:EOG4Q2DH0
CTD:6166 EMBL:AB000910 RefSeq:NP_999082.1 RefSeq:XP_003134062.2
RefSeq:XP_003359770.1 UniGene:Ssc.2707 ProteinModelPortal:P83884
SMR:P83884 STRING:P83884 PRIDE:P83884 Ensembl:ENSSSCT00000005521
Ensembl:ENSSSCT00000018266 Ensembl:ENSSSCT00000018460
GeneID:100514135 GeneID:100623428 GeneID:396952 KEGG:ssc:100514135
KEGG:ssc:100623428 KEGG:ssc:396952 Uniprot:P83884
Length = 106
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 68/101 (67%), Positives = 76/101 (75%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTF TQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ 102
>RGD|1306640 [details] [associations]
symbol:Rpl36a "ribosomal protein L36a" species:10116 "Rattus
norvegicus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR000552 InterPro:IPR011332 Pfam:PF00935
ProDom:PD002841 PROSITE:PS01172 RGD:1306640 RGD:621156
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH473947
EMBL:CH473969 SUPFAM:SSF57829 eggNOG:COG1631 KO:K02929 OMA:QKGQALQ
Gene3D:3.10.450.80 PANTHER:PTHR10369 CTD:6173 HOVERGEN:HBG056127
CTD:6166 IPI:IPI00230919 RefSeq:NP_001121537.1 RefSeq:NP_112367.1
RefSeq:XP_003751786.1 RefSeq:XP_003751787.1 UniGene:Rn.112597
UniGene:Rn.23433 GeneID:100912182 GeneID:292964 GeneID:81769
KEGG:rno:100912182 KEGG:rno:292964 KEGG:rno:81769 NextBio:635128
EMBL:BC166867 SMR:B2RYQ8 RGD:1566235 Genevestigator:B2RYQ8
Uniprot:B2RYQ8
Length = 106
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 68/101 (67%), Positives = 76/101 (75%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTF TQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ 102
>RGD|621156 [details] [associations]
symbol:Rpl36al "ribosomal protein L36a-like" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0032526 "response to retinoic acid" evidence=ISO] [GO:0042221
"response to chemical stimulus" evidence=ISO] InterPro:IPR000552
InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172
RGD:621156 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
SUPFAM:SSF57829 eggNOG:COG1631 HOGENOM:HOG000224989 KO:K02929
OMA:QKGQALQ Gene3D:3.10.450.80 PANTHER:PTHR10369 CTD:6173
GeneTree:ENSGT00390000018085 HOVERGEN:HBG056127 OrthoDB:EOG4Q2DH0
CTD:6166 EMBL:M19635 EMBL:BC058142 IPI:IPI00230919 PIR:A29820
RefSeq:NP_001121537.1 RefSeq:NP_112367.1 RefSeq:XP_003751786.1
RefSeq:XP_003751787.1 UniGene:Rn.112597 UniGene:Rn.23433
ProteinModelPortal:P83883 SMR:P83883 PRIDE:P83883
Ensembl:ENSRNOT00000043171 Ensembl:ENSRNOT00000048198
Ensembl:ENSRNOT00000057222 GeneID:100912182 GeneID:292964
GeneID:81769 KEGG:rno:100912182 KEGG:rno:292964 KEGG:rno:81769
UCSC:RGD:621156 InParanoid:P83883 NextBio:635128
ArrayExpress:P83883 Genevestigator:P83883
GermOnline:ENSRNOG00000011494 GermOnline:ENSRNOG00000031022
GermOnline:ENSRNOG00000032408 Uniprot:P83883
Length = 106
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 68/101 (67%), Positives = 76/101 (75%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTF TQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ 102
>ZFIN|ZDB-GENE-020423-1 [details] [associations]
symbol:rpl36a "ribosomal protein L36A" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IMP] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IMP]
InterPro:IPR000552 InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841
PROSITE:PS01172 ZFIN:ZDB-GENE-020423-1 GO:GO:0006412 GO:GO:0005840
GO:GO:0009790 GO:GO:0051726 GO:GO:0003735 SUPFAM:SSF57829
eggNOG:COG1631 HOGENOM:HOG000224989 KO:K02929 OMA:QKGQALQ
Gene3D:3.10.450.80 PANTHER:PTHR10369 CTD:6173
GeneTree:ENSGT00390000018085 HOVERGEN:HBG056127 OrthoDB:EOG4Q2DH0
EMBL:AY099511 EMBL:BC055187 IPI:IPI00488785 RefSeq:NP_001189439.1
UniGene:Dr.76010 ProteinModelPortal:P61485 SMR:P61485 STRING:P61485
PRIDE:P61485 Ensembl:ENSDART00000080919 GeneID:195819
KEGG:dre:195819 NextBio:20797182 ArrayExpress:P61485 Bgee:P61485
Uniprot:P61485
Length = 106
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 67/101 (66%), Positives = 76/101 (75%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRT+ TQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTYCKKCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ 102
>UNIPROTKB|J9NU47 [details] [associations]
symbol:LOC100687687 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000552
InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829
Gene3D:3.10.450.80 PANTHER:PTHR10369 GeneTree:ENSGT00390000018085
OMA:PTDSHEE EMBL:AAEX03003117 Ensembl:ENSCAFT00000029272
Uniprot:J9NU47
Length = 106
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 66/101 (65%), Positives = 76/101 (75%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK R+TF TQYKK K+ QG+RR+DRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRQTFCKKCGKYQPHKVTQYKKGKDSLYAQGKRRHDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ 102
>UNIPROTKB|F1NIK4 [details] [associations]
symbol:LOC100859914 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 Gene3D:3.10.450.80
PANTHER:PTHR10369 GeneTree:ENSGT00390000018085 OMA:TRKQSGY
EMBL:AADN02013214 IPI:IPI00603744 Ensembl:ENSGALT00000007941
Uniprot:F1NIK4
Length = 122
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 66/101 (65%), Positives = 75/101 (74%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRT+ TQYKK K+ QG+RRY RKQ+GYGGQTKPIFRKKAK
Sbjct: 18 VNVPKTRRTYCKKCGKHQPHKVTQYKKGKDSLHAQGKRRYTRKQSGYGGQTKPIFRKKAK 77
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 78 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ 118
>ASPGD|ASPL0000001539 [details] [associations]
symbol:AN6181 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000552 InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841
PROSITE:PS01172 GO:GO:0006412 GO:GO:0005840 EMBL:BN001301
GO:GO:0003735 EMBL:AACD01000105 SUPFAM:SSF57829 eggNOG:COG1631
HOGENOM:HOG000224989 KO:K02929 OMA:QKGQALQ Gene3D:3.10.450.80
PANTHER:PTHR10369 OrthoDB:EOG4KD9WN RefSeq:XP_663785.1
ProteinModelPortal:Q5AZU9 SMR:Q5AZU9 STRING:Q5AZU9
EnsemblFungi:CADANIAT00006829 GeneID:2871075 KEGG:ani:AN6181.2
Uniprot:Q5AZU9
Length = 106
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 64/99 (64%), Positives = 73/99 (73%)
Query: 4 VNVPKQRRTFXXXXX--XXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK R+T+ TQYK K QG+RRYDRKQ+GYGGQTKP+F KK
Sbjct: 2 VNVPKTRKTYCKGKECHKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
AKTTKK+VLR+ECT+CK +KQL LKRCKHFELGGDKK K
Sbjct: 62 AKTTKKVVLRLECTQCKTKKQLALKRCKHFELGGDKKTK 100
>UNIPROTKB|G4NBG4 [details] [associations]
symbol:MGG_00546 "60S ribosomal protein L44" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR000552 InterPro:IPR011332 Pfam:PF00935
ProDom:PD002841 PROSITE:PS01172 EMBL:CM001235 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0043581 SUPFAM:SSF57829 KO:K02929
Gene3D:3.10.450.80 PANTHER:PTHR10369 RefSeq:XP_003718505.1
ProteinModelPortal:G4NBG4 SMR:G4NBG4 EnsemblFungi:MGG_00546T0
GeneID:2674571 KEGG:mgr:MGG_00546 Uniprot:G4NBG4
Length = 106
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 64/99 (64%), Positives = 72/99 (72%)
Query: 4 VNVPKQRRTFXXXXX--XXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VN+PK RRT+ TQYK K QG+RRYDRKQ+GYGGQTKP+F KK
Sbjct: 2 VNIPKTRRTYCAGKECKKHTNHRVTQYKAGKASSFAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
AKTTKKIVLR+ECT CK + QLP+KRCKHFELGGDKK K
Sbjct: 62 AKTTKKIVLRLECTVCKTKCQLPIKRCKHFELGGDKKTK 100
>UNIPROTKB|F1MG09 [details] [associations]
symbol:F1MG09 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 Gene3D:3.10.450.80
PANTHER:PTHR10369 GeneTree:ENSGT00390000018085 EMBL:DAAA02009813
IPI:IPI00841541 Ensembl:ENSBTAT00000050149 OMA:MECADCK
Uniprot:F1MG09
Length = 128
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 66/101 (65%), Positives = 74/101 (73%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTF TQYKK K+ QG+RRYDRKQ+GYGGQTKPIF KKAK
Sbjct: 24 VNVPKTRRTFCKKCGKRQPHNVTQYKKGKDSVYAQGKRRYDRKQSGYGGQTKPIFWKKAK 83
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C+ ++ L +KR KHFELGGDKKRK Q
Sbjct: 84 TTKKIVLRLECVEPNCRSKRMLAIKRYKHFELGGDKKRKGQ 124
>POMBASE|SPAC15E1.03 [details] [associations]
symbol:rpl42 "60S ribosomal protein L36/L42"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR000552
InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172
PomBase:SPAC15E1.03 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003735 GO:GO:0002181 GO:GO:0022625 SUPFAM:SSF57829
eggNOG:COG1631 HOGENOM:HOG000224989 KO:K02929 OMA:QKGQALQ
Gene3D:3.10.450.80 PANTHER:PTHR10369 PIR:T37718 RefSeq:NP_594304.1
ProteinModelPortal:Q9UTI8 SMR:Q9UTI8 STRING:Q9UTI8
EnsemblFungi:SPAC15E1.03.1 GeneID:2542789 KEGG:spo:SPAC15E1.03
OrthoDB:EOG4KD9WN NextBio:20803833 Uniprot:Q9UTI8
Length = 106
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 60/99 (60%), Positives = 72/99 (72%)
Query: 4 VNVPKQRRTF--XXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VN+PK R+T+ TQYKK + K QG+RRYDRKQ+G+GGQTKP+F KK
Sbjct: 2 VNIPKTRKTYCPGKNCRKHTVHRVTQYKKGPDSKLAQGKRRYDRKQSGFGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
AK TKK+VLR+EC CKY+ QL LKRCKHFELGG+KK K
Sbjct: 62 AKVTKKVVLRLECVSCKYKNQLVLKRCKHFELGGEKKTK 100
>RGD|6496910 [details] [associations]
symbol:LOC100910714 "60S ribosomal protein L36a-like"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000552 InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841
PROSITE:PS01172 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
SUPFAM:SSF57829 Gene3D:3.10.450.80 PANTHER:PTHR10369
GeneTree:ENSGT00390000018085 OMA:PTDSHEE IPI:IPI00557904
Ensembl:ENSRNOT00000039948 Uniprot:F1LWX1
Length = 106
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 64/101 (63%), Positives = 74/101 (73%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK R+TF TQYK K+ QG+RRYDRKQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRQTFCKKCGKHQPHKVTQYKMGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
+TKK VLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 STKKNVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKCQ 102
>TAIR|locus:2090885 [details] [associations]
symbol:AT3G23390 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] InterPro:IPR000552
InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172
EnsemblPlants:AT3G23390.1 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006412 EMBL:AL161538
GO:GO:0003735 EMBL:Z97336 EMBL:AB015474 GO:GO:0022625
SUPFAM:SSF57829 EMBL:AY062855 EMBL:BT001193 EMBL:AY065121
EMBL:AY081639 EMBL:AY085174 EMBL:AY085784 IPI:IPI00535094
PIR:A71405 RefSeq:NP_188981.1 RefSeq:NP_193168.1 UniGene:At.24570
UniGene:At.28618 ProteinModelPortal:O23290 SMR:O23290 IntAct:O23290
STRING:O23290 PRIDE:O23290 EnsemblPlants:AT4G14320.1 GeneID:821920
GeneID:827074 KEGG:ath:AT3G23390 KEGG:ath:AT4G14320 GeneFarm:384
GeneFarm:385 TAIR:At3g23390 TAIR:At4g14320 eggNOG:COG1631
HOGENOM:HOG000224989 InParanoid:O23290 KO:K02929 OMA:QKGQALQ
PhylomeDB:O23290 ProtClustDB:CLSN2684316 Genevestigator:O23290
GermOnline:AT3G23390 Gene3D:3.10.450.80 PANTHER:PTHR10369
Uniprot:O23290
Length = 105
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 60/99 (60%), Positives = 72/99 (72%)
Query: 4 VNVPKQRRTFXXXXX--XXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VN+PK + T+ TQYKK K+ A QG+RRYDRKQ+GYGGQTKP+F KK
Sbjct: 2 VNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
AKTTKKIVLR++C CK+ Q P+KRCKHFE+GGDKK K
Sbjct: 62 AKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGK 100
>SGD|S000005106 [details] [associations]
symbol:RPL42A "Ribosomal 60S subunit protein L42A"
species:4932 "Saccharomyces cerevisiae" [GO:0005622 "intracellular"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0046898 "response to cycloheximide" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000552 InterPro:IPR011332 Pfam:PF00935
ProDom:PD002841 PROSITE:PS01172 SGD:S000005106 GO:GO:0046677
EMBL:BK006947 GO:GO:0003735 GO:GO:0002181 PDB:4B6A PDBsum:4B6A
EMBL:X92517 GO:GO:0046898 GO:GO:0022625 SUPFAM:SSF57829 PDB:1K5Y
PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y
PDBsum:1S1I PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E
PDBsum:3U5I HOGENOM:HOG000224989 KO:K02929 Gene3D:3.10.450.80
PANTHER:PTHR10369 EMBL:D10578 EMBL:Z71438 PIR:S63114
RefSeq:NP_012010.1 RefSeq:NP_014237.2 ProteinModelPortal:P0CX27
SMR:P0CX27 EnsemblFungi:YHR141C EnsemblFungi:YNL162W GeneID:855560
GeneID:856544 KEGG:sce:YHR141C KEGG:sce:YNL162W CYGD:YNL162w
EvolutionaryTrace:P0CX27 NextBio:979652 ArrayExpress:P0CX27
GermOnline:YNL162W Uniprot:P0CX27
Length = 106
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 62/101 (61%), Positives = 73/101 (72%)
Query: 4 VNVPKQRRTFXXXXX--XXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK R+T+ TQYK K QG+RRYDRKQ+G+GGQTKP+F KK
Sbjct: 2 VNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQ 102
AKTTKK+VLR+EC +CK R QL LKRCKHFELGG+KK+K Q
Sbjct: 62 AKTTKKVVLRLECVKCKTRAQLTLKRCKHFELGGEKKQKGQ 102
>SGD|S000001183 [details] [associations]
symbol:RPL42B "Ribosomal 60S subunit protein L42B"
species:4932 "Saccharomyces cerevisiae" [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;TAS] [GO:0046898 "response to cycloheximide"
evidence=IEA] [GO:0046677 "response to antibiotic" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR000552 InterPro:IPR011332 Pfam:PF00935
ProDom:PD002841 PROSITE:PS01172 SGD:S000001183 EMBL:BK006934
GO:GO:0046677 GO:GO:0003735 GO:GO:0002181 EMBL:U10398 GO:GO:0046898
GO:GO:0022625 SUPFAM:SSF57829 KO:K02929 Gene3D:3.10.450.80
PANTHER:PTHR10369 GeneTree:ENSGT00390000018085 RefSeq:NP_012010.1
RefSeq:NP_014237.2 EnsemblFungi:YHR141C EnsemblFungi:YNL162W
GeneID:855560 GeneID:856544 KEGG:sce:YHR141C KEGG:sce:YNL162W
NextBio:979652 EMBL:D10579 PIR:C43301 ProteinModelPortal:P0CX28
SMR:P0CX28 CYGD:YHR141c ArrayExpress:P0CX28 GermOnline:YHR141C
Uniprot:P0CX28
Length = 106
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 62/101 (61%), Positives = 73/101 (72%)
Query: 4 VNVPKQRRTFXXXXX--XXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
VNVPK R+T+ TQYK K QG+RRYDRKQ+G+GGQTKP+F KK
Sbjct: 2 VNVPKTRKTYCKGKTCRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGFGGQTKPVFHKK 61
Query: 62 AKTTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRKVQ 102
AKTTKK+VLR+EC +CK R QL LKRCKHFELGG+KK+K Q
Sbjct: 62 AKTTKKVVLRLECVKCKTRAQLTLKRCKHFELGGEKKQKGQ 102
>UNIPROTKB|G8JL02 [details] [associations]
symbol:G8JL02 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 SUPFAM:SSF57829 Gene3D:3.10.450.80 PANTHER:PTHR10369
GeneTree:ENSGT00390000018085 EMBL:DAAA02030436
Ensembl:ENSBTAT00000048087 OMA:ANVPKTR Uniprot:G8JL02
Length = 104
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 63/101 (62%), Positives = 74/101 (73%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTF TQ KK K+ QG+RRYD+KQ+GYGGQTKPIFRKKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQCKKGKDSLYAQGKRRYDQKQSGYGGQTKPIFRKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTK++VLR+EC E C+ ++ L +KRCKHFELGG KKRK Q
Sbjct: 62 TTKEVVLRLECVEPNCRSKRMLAIKRCKHFELGGHKKRKDQ 102
>RGD|1563431 [details] [associations]
symbol:RGD1563431 "similar to large subunit ribosomal protein
L36a" species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000552 InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841
PROSITE:PS01172 RGD:1563431 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 SUPFAM:SSF57829 Gene3D:3.10.450.80 PANTHER:PTHR10369
GeneTree:ENSGT00390000018085 OMA:ANVPKTR IPI:IPI00766050
Ensembl:ENSRNOT00000052106 Uniprot:F1M4S5
Length = 106
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 64/100 (64%), Positives = 72/100 (72%)
Query: 5 NVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAKT 64
NVPK RRTF TQYKK K+ QG+RR DRKQ GYGGQTKPIF KKAKT
Sbjct: 3 NVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRCDRKQNGYGGQTKPIFCKKAKT 62
Query: 65 TKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TKK+VLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 63 TKKVVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ 102
>UNIPROTKB|J9JHU1 [details] [associations]
symbol:J9JHU1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 Gene3D:3.10.450.80
PANTHER:PTHR10369 GeneTree:ENSGT00390000018085 EMBL:AAEX03012155
Ensembl:ENSCAFT00000011513 OMA:KTRRTFR Uniprot:J9JHU1
Length = 106
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 63/101 (62%), Positives = 74/101 (73%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK R TF TQYKK K+ QG+R YD+KQ+GYGGQTKPIF++KAK
Sbjct: 2 VNVPKTRWTFCKKCGKHQPHKVTQYKKGKDSLYTQGKRHYDQKQSGYGGQTKPIFQEKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQ 102
>UNIPROTKB|F8WFR5 [details] [associations]
symbol:RGD1566373 "Protein RGD1566373" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000552
InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 Gene3D:3.10.450.80
PANTHER:PTHR10369 GeneTree:ENSGT00390000018085 IPI:IPI00367636
Ensembl:ENSRNOT00000047773 Uniprot:F8WFR5
Length = 106
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 64/101 (63%), Positives = 73/101 (72%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RRTF TQYKK K+ + QG+RRYDRKQ+ YGG+TKPIF KKAK
Sbjct: 2 VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLSAQGKRRYDRKQSVYGGKTKPIFCKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
T KKIVLR+EC E C ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TRKKIVLRLECVEPHCGSKRMLAIKRCKHFELGGDKKRKGQ 102
>UNIPROTKB|G3N147 [details] [associations]
symbol:G3N147 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 Gene3D:3.10.450.80
PANTHER:PTHR10369 GeneTree:ENSGT00390000018085 EMBL:DAAA02004584
Ensembl:ENSBTAT00000048881 OMA:IALRLEC Uniprot:G3N147
Length = 126
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 62/101 (61%), Positives = 72/101 (71%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
V+VPK T TQYKK K+ QG+RRYD KQ+GYGGQTKP+FRKKAK
Sbjct: 22 VDVPKTHWTLCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDGKQSGYGGQTKPVFRKKAK 81
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 82 TTKKIVLRLECAEPKCRSKRILAIKRCKHFELGGDKKRKGQ 122
>UNIPROTKB|J9P9C5 [details] [associations]
symbol:LOC610388 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000552
InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829
Gene3D:3.10.450.80 PANTHER:PTHR10369 GeneTree:ENSGT00390000018085
EMBL:AAEX03015185 OMA:MECADCK Ensembl:ENSCAFT00000022503
Uniprot:J9P9C5
Length = 106
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 64/101 (63%), Positives = 71/101 (70%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNV K RRT TQYKK K+ QG+RRYDRKQ+GYGGQTK IF KKAK
Sbjct: 2 VNVSKTRRTLCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKLIFWKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR EC E C+ ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRFECVEPNCRSQRMLAIKRCKHFELGGDKKRKGQ 102
>UNIPROTKB|J9NWR0 [details] [associations]
symbol:J9NWR0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 Gene3D:3.10.450.80
PANTHER:PTHR10369 GeneTree:ENSGT00390000018085 EMBL:AAEX03010994
Ensembl:ENSCAFT00000046894 OMA:ERANHQH Uniprot:J9NWR0
Length = 85
Score = 277 (102.6 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 53/70 (75%), Positives = 60/70 (85%)
Query: 35 KACQGRRRYDRKQAGYGGQTKPIFRKKAKTTKKIVLRMECTE--CKYRKQLPLKRCKHFE 92
K C G+RRYDRKQ+GYGGQTKPIFRKKAKTTKKIVLR+EC E C+ ++ L +KRCKHFE
Sbjct: 13 KKC-GKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFE 71
Query: 93 LGGDKKRKVQ 102
LGG KKRK Q
Sbjct: 72 LGGGKKRKGQ 81
Score = 46 (21.3 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 9/10 (90%), Positives = 9/10 (90%)
Query: 4 VNVPKQRRTF 13
VNVPK RRTF
Sbjct: 2 VNVPKTRRTF 11
>UNIPROTKB|J9P6P5 [details] [associations]
symbol:J9P6P5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 Gene3D:3.10.450.80
PANTHER:PTHR10369 GeneTree:ENSGT00390000018085 EMBL:AAEX03000755
Ensembl:ENSCAFT00000015424 OMA:FFFRADS Uniprot:J9P6P5
Length = 105
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 60/98 (61%), Positives = 70/98 (71%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
+NVPK RTF TQYKK K+ QG+RRYDRKQ GYGGQTKPIF KKAK
Sbjct: 2 MNVPKTHRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQRGYGGQTKPIFWKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKR 99
TTKKIVLR+EC E C+ ++ L +KRCK F+LGGDK+R
Sbjct: 62 TTKKIVLRLECVEPNCRSKRMLAIKRCKQFDLGGDKRR 99
>DICTYBASE|DDB_G0270984 [details] [associations]
symbol:rpl36a "S60 ribosomal protein L36a"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;ISS] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000552 InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841
PROSITE:PS01172 dictyBase:DDB_G0270984 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
SUPFAM:SSF57829 eggNOG:COG1631 KO:K02929 Gene3D:3.10.450.80
PANTHER:PTHR10369 RefSeq:XP_646366.1 STRING:Q55CW5 PRIDE:Q55CW5
EnsemblProtists:DDB0231154 GeneID:8617321 KEGG:ddi:DDB_G0270984
ProtClustDB:PTZ00157 Uniprot:Q55CW5
Length = 103
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 60/97 (61%), Positives = 69/97 (71%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VN+PK R+T TQYK K QG+RRYDRKQ+G+GGQTKP+F KKAK
Sbjct: 2 VNIPKARKTHCVKCNKHTPHKVTQYKAGKPSLFAQGKRRYDRKQSGFGGQTKPVFHKKAK 61
Query: 64 TTKKIVLRMECTECKYRKQLPLKRCKHFELGGDKKRK 100
TTKKIVLRMEC+ C Y+KQ LKRCK FELGG+KK K
Sbjct: 62 TTKKIVLRMECS-CGYKKQQVLKRCKRFELGGEKKSK 97
>RGD|1564617 [details] [associations]
symbol:RGD1564617 "similar to large subunit ribosomal protein
L36a" species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000552 InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841
RGD:1564617 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
SUPFAM:SSF57829 Gene3D:3.10.450.80 PANTHER:PTHR10369
GeneTree:ENSGT00390000018085 OrthoDB:EOG4Q2DH0 IPI:IPI00366631
Ensembl:ENSRNOT00000043603 Uniprot:D3ZDE0
Length = 106
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 59/99 (59%), Positives = 72/99 (72%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK R+TF TQYK K+ QG++RYDRKQ+G+GGQTK IF KKAK
Sbjct: 2 VNVPKTRQTFCKKCGKHQPHKVTQYKNGKDSLYAQGKQRYDRKQSGHGGQTKTIFCKKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRK 100
TT+KIVLR+EC + C+ ++ LP+KRCK FELGGDKKRK
Sbjct: 62 TTEKIVLRLECVKPNCRSKRMLPIKRCKPFELGGDKKRK 100
>UNIPROTKB|J9P1B4 [details] [associations]
symbol:LOC100688104 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR000552
InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 Gene3D:3.10.450.80
PANTHER:PTHR10369 GeneTree:ENSGT00390000018085 OMA:IALRLEC
EMBL:AAEX03005675 Ensembl:ENSCAFT00000004437
Ensembl:ENSCAFT00000021680 Uniprot:J9P1B4
Length = 110
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 61/105 (58%), Positives = 70/105 (66%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGR----RRYDRKQAGYGGQTKPIFR 59
VNVPK RT TQYKK K+ QG+ R YDRKQ+GYGGQTKPIF
Sbjct: 2 VNVPKNHRTLCKKCGKHQPYKVTQYKKGKDSLYAQGKLDNSRCYDRKQSGYGGQTKPIFW 61
Query: 60 KKAKTTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
KKAKTT+KI LR+EC E C+ ++ L KRCKHF+LGGDKKRK Q
Sbjct: 62 KKAKTTRKIALRLECVEPKCRSKRMLATKRCKHFQLGGDKKRKGQ 106
>UNIPROTKB|F1RT21 [details] [associations]
symbol:F1RT21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 PROSITE:PS01172 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 Gene3D:3.10.450.80
PANTHER:PTHR10369 GeneTree:ENSGT00390000018085 EMBL:CU407267
Ensembl:ENSSSCT00000004852 OMA:CIEPNCT Uniprot:F1RT21
Length = 106
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 57/101 (56%), Positives = 67/101 (66%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VN+PK +TF TQYKK K+ Q + YDRKQ+ YG QTK IF+ KAK
Sbjct: 2 VNIPKTHQTFSKKYGKHQPCKVTQYKKGKDSLCAQAKWHYDRKQSDYGRQTKLIFQIKAK 61
Query: 64 TTKKIVLRMECTE--CKYRKQLPLKRCKHFELGGDKKRKVQ 102
TTKKIVLR+EC E C ++ L +KRCKHFELGGDKKRK Q
Sbjct: 62 TTKKIVLRLECIEPNCTSKRMLAIKRCKHFELGGDKKRKGQ 102
>UNIPROTKB|F1M8T2 [details] [associations]
symbol:F1M8T2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000552
InterPro:IPR011332 Pfam:PF00935 ProDom:PD002841 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF57829 Gene3D:3.10.450.80
PANTHER:PTHR10369 IPI:IPI00781655 Ensembl:ENSRNOT00000055639
Uniprot:F1M8T2
Length = 106
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 52/79 (65%), Positives = 59/79 (74%)
Query: 26 TQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAKTTKKIVLRMECTE--CKYRKQL 83
TQYKK K + QG++ YDRKQ+ YGGQTK IF KKAK T KIVLR+EC E C K L
Sbjct: 25 TQYKKGKGSLSAQGKQCYDRKQSDYGGQTKSIFCKKAKPTGKIVLRLECVEPNCG-SKML 83
Query: 84 PLKRCKHFELGGDKKRKVQ 102
+K+CKHFELGGDKKRK Q
Sbjct: 84 AVKKCKHFELGGDKKRKGQ 102
>UNIPROTKB|H7BY91 [details] [associations]
symbol:RPL36A "60S ribosomal protein L36a" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AL035422 SUPFAM:SSF57829 Gene3D:3.10.450.80
PANTHER:PTHR10369 HGNC:HGNC:10359 ChiTaRS:RPL36A
Ensembl:ENST00000372849 Uniprot:H7BY91
Length = 80
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 39/69 (56%), Positives = 45/69 (65%)
Query: 2 SHVNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
S VNVPK RRTF TQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKK
Sbjct: 10 SMVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKK 69
Query: 62 AKTTKKIVL 70
+ ++ L
Sbjct: 70 RQKIEECAL 78
>UNIPROTKB|H0Y3V9 [details] [associations]
symbol:H0Y3V9 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AL035422 SUPFAM:SSF57829 Gene3D:3.10.450.80
PANTHER:PTHR10369 Ensembl:ENST00000409338 Bgee:H0Y3V9
Uniprot:H0Y3V9
Length = 88
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 38/60 (63%), Positives = 41/60 (68%)
Query: 2 SHVNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKK 61
S VNVPK RRTF TQYKK K+ QG+RRYDRKQ+GYGGQTKPIFRKK
Sbjct: 11 SMVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKK 70
>UNIPROTKB|I3LHT5 [details] [associations]
symbol:I3LHT5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000552 InterPro:IPR011332
Pfam:PF00935 ProDom:PD002841 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 SUPFAM:SSF57829 Gene3D:3.10.450.80 PANTHER:PTHR10369
GeneTree:ENSGT00390000018085 Ensembl:ENSSSCT00000022657 OMA:KIFRRRX
Uniprot:I3LHT5
Length = 87
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 38/80 (47%), Positives = 42/80 (52%)
Query: 4 VNVPKQRRTFXXXXXXXXXXXXTQYKKSKERKACQGRRRYDRKQAGYGGQTKPIFRKKAK 63
VNVPK RTF TQYKK K+ QG+ YDRK +GYGGQ KPIF +KAK
Sbjct: 2 VNVPKTHRTFCKKCGKHQPHKVTQYKKDKDSLYAQGKWHYDRKHSGYGGQAKPIFPEKAK 61
Query: 64 TTKKI--VLRMECTECKYRK 81
I E E K RK
Sbjct: 62 KMVAIKRCKHFELGEDKKRK 81
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 78 KYRKQLPLKRCKHFELGGDKKRKVQ 102
K +K + +KRCKHFELG DKKRK Q
Sbjct: 59 KAKKMVAIKRCKHFELGEDKKRKGQ 83
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 105 93 0.00091 102 3 11 22 0.47 29
29 0.41 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 489 (52 KB)
Total size of DFA: 102 KB (2073 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.21u 0.11s 10.32t Elapsed: 00:00:00
Total cpu time: 10.22u 0.11s 10.33t Elapsed: 00:00:00
Start: Thu Aug 15 17:08:27 2013 End: Thu Aug 15 17:08:27 2013